BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 043955
         (835 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/835 (69%), Positives = 698/835 (83%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG ++DAE+LFD +  +T+FTWNAM+GAYV+NGEPL  LE Y  MRV GI +DA T
Sbjct: 159 MYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACT 218

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPC++KAC +LKD  CGA++HGL +K GY S  F+ NS+V MY KC D   ARQLFDRM 
Sbjct: 219 FPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMP 278

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EKEDVV WNS+ISAYS++GQ +EAL LF EMQ+  L  N YTFVAALQACEDSSF   GM
Sbjct: 279 EKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGM 338

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IHA  +KS   + V+VANALIAMYAR GKM EAA + Y +++ D++SWNSML+GFVQN 
Sbjct: 339 FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNG 398

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           LY +A+QF+ E++ AGQKPD V  ++ ++AS R GN LNG ++HAYA+K G  SDLQ+GN
Sbjct: 399 LYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGN 458

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMYAK C + YM  +F +M  +D +SWTTIIAG+AQN  H +ALELFR VQLEG+D 
Sbjct: 459 SLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDL 518

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE 420
           DVM+I S+L+ACSGLK +S  KEIH YIIRKGLSDLV+ N IVDVYG+CGN+DY+  +FE
Sbjct: 519 DVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFE 578

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            IE KDVVSWTSMIS YVHNGLANEALELF+LM E  VE DSI+LVS LSAA+SLS LKK
Sbjct: 579 LIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKK 638

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GKE++GF+IRKGF LEGS+AS+LVDMYARCG L+ +  VFN ++ KDL+LWTSMINA G+
Sbjct: 639 GKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGM 698

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG G+ AIDLF +ME ES APDHI F+A+LYACSHSGL+NEG++FLE M+ +YQL+PWPE
Sbjct: 699 HGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPE 758

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY CLVDLLGRANHLEEAYQFV+ M++EPTAEVWCALLGAC++HSNKELGEI A+KLLE+
Sbjct: 759 HYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEM 818

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP NPGNYVL+SNV+AA R+WKDVE+VRMRM+ SGLKK PG SWIE+GNK+H+F+ARDKS
Sbjct: 819 DPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKS 878

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H +S EIY KL++ITEKL +EGGYVAQT+FVLHN +EEEKVQMLYGHSERLAIAYG+L +
Sbjct: 879 HPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTT 938

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            EG+ +RITKNLRVC DCH+FCKL+S+ F RELV+RDANRFHHF+ GVCSCGD W
Sbjct: 939 PEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 177/592 (29%), Positives = 319/592 (53%), Gaps = 15/592 (2%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHG-LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            +  V++ C   K L  G ++H  ++      ++ F+   LV MY KC     A +LFD 
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K  +  WN++I AY  +G+ L +L L+REM+  G+  +A TF   L+AC        
Sbjct: 176 MPHK-TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRC 234

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL-ENKDSVSWNSMLTGFV 237
           G E+H   +K G    V+VAN+++ MY +C  +  A  +  ++ E +D VSWNSM++ + 
Sbjct: 235 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 294

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            N    +A++ F E+Q A   P+    V A+ A      +  G  +HA  +K  +  ++ 
Sbjct: 295 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 354

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N L+ MYA+   +     +FY M   D ISW ++++G+ QN  + +AL+ +  ++  G
Sbjct: 355 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG 414

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
              D++ + S++ A +         +IH Y ++ GL SDL + N++VD+Y K  ++ Y  
Sbjct: 415 QKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 474

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F+ +  KDVVSWT++I+ +  NG  + ALELF  +    ++ D + + S L A S L 
Sbjct: 475 CIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 534

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           ++   KE++ +IIRKG + +  + + +VD+Y  CG +D A ++F  ++ KD++ WTSMI+
Sbjct: 535 LISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMIS 593

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQL 595
               +G    A++LF+ M+     PD I+ +++L A +    + +GK+    ++R  + L
Sbjct: 594 CYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVL 653

Query: 596 DPWPEHYACLVDLLGRANHLEEA---YQFVRSMQIEPTAEVWCALLGACRVH 644
           +      + LVD+  R   LE++   + F+R+  +     +W +++ A  +H
Sbjct: 654 E--GSLASTLVDMYARCGTLEKSRNVFNFIRNKDL----VLWTSMINAYGMH 699


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score = 1229 bits (3180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/835 (68%), Positives = 692/835 (82%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGSVLDAE +FDK+S+R++FTWNAM+G YVSNGE L  LE Y  MR LG+S D++T
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP ++KAC +++DL CGA+IHGL +K G DS  F+VNSLVA+YAKC D   AR+LFDRM 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV WNSIISAYS +G C EAL LF EM + G+VTN YTF AALQACEDSSF  LGM
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHAA +KSG+ L VYVANAL+AMY R GKM EAA +   LE KD V+WNSMLTGF+QN 
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           LY +A++FF +LQ A  KPDQV  ++ + ASGRLG LLNGKE+HAYAIK GF S++ +GN
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           TL+DMYAKCCC++Y GR F  M  +D ISWTT  AGYAQN C+L+ALEL R +Q+EG+D 
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE 420
           D  +IGS+L+AC GL C+ + KEIHGY IR GLSD V+ N I+DVYG+CG IDY+  +FE
Sbjct: 361 DATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFE 420

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
           SIE KDVVSWTSMIS YVHNGLAN+ALE+F  M E  +E D +TLVS LSA  SLS LKK
Sbjct: 421 SIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKK 480

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GKE++GFIIRKGF LEGS++++LVDMYARCG+++ A K+F C + ++LILWT+MI+A G+
Sbjct: 481 GKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGM 540

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG G+ A++LF +M+ E   PDHITFLALLYACSHSGL+NEGK FLEIM+C+YQL+PWPE
Sbjct: 541 HGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPE 600

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY CLVDLLGR N LEEAYQ V+SMQ EPT EVWCALLGACR+HSNKE+GE+ A+KLLEL
Sbjct: 601 HYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLEL 660

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           D  NPGNYVL+SNVFAA+ +WKDVE+VRMRM+GSGL K PG SWIE+GNKIH+F++RDK 
Sbjct: 661 DLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKL 720

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H E D+IY+KLA++TEKL+REGGYVAQT+FVLHNV EEEKVQMLYGHSERLAIAYG+L +
Sbjct: 721 HPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLAT 780

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            EG+ IR+TKNLRVC DCHSFC LVSR F REL+VRDA+RFHHF+ G+CSCGD+W
Sbjct: 781 AEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score = 1228 bits (3176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/835 (69%), Positives = 697/835 (83%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG ++DAE+LFD +  +T+FTWNAM+GAYV+NGEPL  LE Y  MRV GI +DA T
Sbjct: 123 MYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACT 182

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPC++KAC +LKD   GA++HGL +K GY S  F+ NS+V MY KC D   ARQLFDRM 
Sbjct: 183 FPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMP 242

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EKEDVV WNS+ISAYS++GQ +EAL LF EMQ+  L  N YTFVAALQACEDSSF   GM
Sbjct: 243 EKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGM 302

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IHA  +KS   + V+VANALIAMYAR GKM EAA + Y +++ D++SWNSML+GFVQN 
Sbjct: 303 FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNG 362

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           LY +A+QF+ E++ AGQKPD V  ++ ++AS R GN L+G ++HAYA+K G  SDLQ+GN
Sbjct: 363 LYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGN 422

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMYAK C + YM  +F +M  +D +SWTTIIAG+AQN  H +ALELFR VQLEG+D 
Sbjct: 423 SLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDL 482

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE 420
           DVM+I S+L+ACSGLK +S  KEIH YIIRKGLSDLV+ N IVDVYG+CGN+DY+  +FE
Sbjct: 483 DVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFE 542

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            IE KDVVSWTSMIS YVHNGLANEALELF+LM E  VE DSI+LVS LSAA+SLS LKK
Sbjct: 543 LIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKK 602

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GKE++GF+IRKGF LEGS+AS+LVDMYARCG L+ +  VFN ++ KDL+LWTSMINA G+
Sbjct: 603 GKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGM 662

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG G+ AIDLF +ME ES APDHI F+A+LYACSHSGL+NEG++FLE M+ +YQL+PWPE
Sbjct: 663 HGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPE 722

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HYACLVDLLGRANHLEEAYQFV+ M++EPTAEVWCALLGAC++HSNKELGEI A+KLLE+
Sbjct: 723 HYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEM 782

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP NPGNYVL+SNV++A R+WKDVE VRMRM+ SGLKK PG SWIE+GNK+H+F+ARDKS
Sbjct: 783 DPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKS 842

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H +S EIY KL++ITEKL +EGGYVAQT+FVLHN +EEEKVQMLYGHSERLAIAYG+L +
Sbjct: 843 HPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTT 902

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            EG+ +RITKNLRVC DCH+FCKL+S+ F RELV+RDANRFHHF+ GVCSCGD W
Sbjct: 903 PEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957



 Score =  285 bits (728), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 177/592 (29%), Positives = 319/592 (53%), Gaps = 15/592 (2%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHG-LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            +  V++ C   K L  G ++H  ++      ++ F+   LV MY KC     A +LFD 
Sbjct: 80  AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K  +  WN++I AY  +G+ L +L L+REM+  G+  +A TF   L+AC        
Sbjct: 140 MPHK-TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRY 198

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL-ENKDSVSWNSMLTGFV 237
           G E+H   +K G    V+VAN+++ MY +C  +  A  +  ++ E +D VSWNSM++ + 
Sbjct: 199 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 258

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            N    +A++ F E+Q A   P+    V A+ A      +  G  +HA  +K  +  ++ 
Sbjct: 259 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 318

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N L+ MYA+   +     +FY M   D ISW ++++G+ QN  + +AL+ +  ++  G
Sbjct: 319 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG 378

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
              D++ + S++ A +         +IH Y ++ GL SDL + N++VD+Y K  ++ Y  
Sbjct: 379 QKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 438

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F+ +  KDVVSWT++I+ +  NG  + ALELF  +    ++ D + + S L A S L 
Sbjct: 439 CIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 498

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           ++   KE++ +IIRKG + +  + + +VD+Y  CG +D A ++F  ++ KD++ WTSMI+
Sbjct: 499 LISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMIS 557

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQL 595
               +G    A++LF+ M+     PD I+ +++L A +    + +GK+    ++R  + L
Sbjct: 558 CYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVL 617

Query: 596 DPWPEHYACLVDLLGRANHLEEA---YQFVRSMQIEPTAEVWCALLGACRVH 644
           +      + LVD+  R   LE++   + F+R+  +     +W +++ A  +H
Sbjct: 618 E--GSLASTLVDMYARCGTLEKSRNVFNFIRNKDL----VLWTSMINAYGMH 663


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score = 1172 bits (3033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/787 (69%), Positives = 664/787 (84%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           MRVLG+  D+FTFPCV+KAC +++D+  GA+IHGL++KCGYDS  F+ NSLV+MYAKC D
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              AR+LFDRM E+ DVV WNSIISAYS +GQC+EALGLFREMQ+ G+  N YT VAALQ
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           ACEDSSF+ LGMEIHAA +KS Q L VYVANAL+AM+ R GKM+ AA +  +L+ KD+++
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           WNSM+ GF QN LY +A+QFF  LQ A  KPD+V  ++ ++ASGRLG LLNGKE+HAYA+
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K    S+L+IGNTL+DMY+KCCCV Y G VF +M  +D ISWTT+IA YAQNNCH +AL+
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGK 408
           L R VQ +G+D D M+IGS L+ACSGL+C+S  KE+HGY +++GLSDL++ N I+DVY  
Sbjct: 301 LLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYAD 360

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           CGNI+Y+  +FESI+ KDVVSWTSMIS YVHNGLANEAL +FYLM E +VE DSITLVS 
Sbjct: 361 CGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSI 420

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           LSAA+SLS L KGKE++GFI RKGF LEGS  +SLVDMYA CG+L+ A KVF C ++K L
Sbjct: 421 LSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSL 480

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
           +LWT+MINA G+HGRGK A++LF  ME +   PDHITFLALLYACSHSGLINEGK+ LE 
Sbjct: 481 VLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLET 540

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           M+C YQL+PWPEHYACLVDLLGRANHLEEAY FV+SMQIEPTAEVWCA LGACR+HSNK+
Sbjct: 541 MKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKK 600

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
           LGEI A+KLL+LDP +PG+YVLISNVFAAS +WKDVE+VRMRM+G GLKK PG SWIE+G
Sbjct: 601 LGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVG 660

Query: 709 NKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHS 768
           NK+H+F+ RDKSH ES +IY+KLA+ITEKLE+EGGYV QT+ VLHNV +EEKVQMLYGHS
Sbjct: 661 NKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHS 720

Query: 769 ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
           ERLAIAYG++ ++EG+ IRITKNLRVCVDCH+FCKLVS+ F REL+VRDA+RFHHFE GV
Sbjct: 721 ERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGV 780

Query: 829 CSCGDYW 835
           CSCGD+W
Sbjct: 781 CSCGDFW 787



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 171/582 (29%), Positives = 315/582 (54%), Gaps = 13/582 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRT-VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KC  +L A +LFD++++R  V +WN+++ AY  NG+ +  L  +  M+  G+  + +
Sbjct: 54  MYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTY 113

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T    ++AC        G +IH  +LK       ++ N+LVAM+ +      A ++FD +
Sbjct: 114 TLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDEL 173

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK+++  WNS+I+ ++ +G   EAL  F  +Q   L  +  + ++ L A     +   G
Sbjct: 174 DEKDNIT-WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNG 232

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            EIHA  +K+  +  + + N LI MY++C  +  A  V  ++ NKD +SW +++  + QN
Sbjct: 233 KEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQN 292

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           + + +A++  R++Q  G   D +   + + A   L  L + KE+H Y +K+G +SDL + 
Sbjct: 293 NCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG-LSDLMMQ 351

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N ++D+YA C  +NY  R+F  +  +D +SWT++I+ Y  N    +AL +F  ++   ++
Sbjct: 352 NMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVE 411

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNV 418
            D + + S+L A + L  +++ KEIHG+I RKG + +   +N++VD+Y  CG+++ +  V
Sbjct: 412 PDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKV 471

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F    SK +V WT+MI++Y  +G    A+ELF +M +  +  D IT ++ L A S   ++
Sbjct: 472 FICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLI 531

Query: 479 KKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMI 535
            +GK L    ++  + LE      + LVD+  R   L+ A      +Q +    +W + +
Sbjct: 532 NEGKRLLE-TMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFL 590

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A  +H     G++A      ++ +S  P     ++ ++A S
Sbjct: 591 GACRIHSNKKLGEIAAQKLLDLDPDS--PGSYVLISNVFAAS 630


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score = 1133 bits (2931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/836 (62%), Positives = 665/836 (79%), Gaps = 1/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ DA ++FD++S+RT+F+WNA++GA+VS+G+ L  +E Y  MRVLG+++DA T
Sbjct: 88  MYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACT 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR-M 119
           FP V+KAC  L +   GA+IHG+ +KCGY    F+ N+L+AMY KC D   AR LFD  M
Sbjct: 148 FPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIM 207

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EKED V WNSIISA+ A G CLEAL LFR MQ VG+ +N YTFVAALQ  ED SF  LG
Sbjct: 208 MEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG 267

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           M IH A +KS     VYVANALIAMYA+CG+M +A  V   +  +D VSWN++L+G VQN
Sbjct: 268 MGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQN 327

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +LY  A+ +FR++Q +GQKPDQV  +N ++ASGR GNLL GKE+HAYAI+ G  S++QIG
Sbjct: 328 ELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIG 387

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           NTL+DMYAKCCCV YMG  F  M  +D ISWTTIIAGYAQN  HL+A+ LFR VQ++G+D
Sbjct: 388 NTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMD 447

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
            D M+IGSVL ACSGLK  +  +EIHGY+ ++ L+D+++ NAIV+VYG+ G+IDY+R  F
Sbjct: 448 VDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAF 507

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           ESI SKD+VSWTSMI+  VHNGL  EALELFY + + N++ DSI ++SALSA ++LS LK
Sbjct: 508 ESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLK 567

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           KGKE++GF+IRKGF LEG +ASSLVDMYA CG ++ + K+F+ V+ +DLILWTSMINANG
Sbjct: 568 KGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANG 627

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HG G  AI LF KM  ++  PDHITFLALLYACSHSGL+ EGK+F EIM+  YQL+PWP
Sbjct: 628 MHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWP 687

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC+VDLL R+N LEEAY FVR+M I+P++E+WCALLGAC +HSNKELGE+ AK+LL+
Sbjct: 688 EHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQ 747

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            D  N G Y LISN+FAA  +W DVE+VR+RM+G+GLKK PG SWIE+ NKIH+F+ARDK
Sbjct: 748 SDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDK 807

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH ++D+IY KLA+ T+ LE++GGY+AQT+FV HNV EEEK QMLYGHSERLA+ YG+L 
Sbjct: 808 SHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLV 867

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +G+ IRITKNLR+C DCH+F K+ S +  R LVVRDANRFHHFE G+CSCGD+W
Sbjct: 868 TPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 170/525 (32%), Positives = 288/525 (54%), Gaps = 9/525 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++  C   K L  G ++H L+LK    +  F+   LV MY KC   R A ++FD M E+ 
Sbjct: 52  LLDLCVAAKALPQGQQLHALLLKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEMSERT 109

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            +  WN+++ A+ +SG+ LEA+ L+++M+ +G+  +A TF + L+AC       LG EIH
Sbjct: 110 -IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ---LENKDSVSWNSMLTGFVQND 240
              VK G    V+V NALIAMY +CG +   A VL+    +E +D+VSWNS+++  V   
Sbjct: 169 GVAVKCGYGEFVFVCNALIAMYGKCGDLG-GARVLFDGIMMEKEDTVSWNSIISAHVAEG 227

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  FR +Q  G   +    V A+        +  G  +H   +K    +D+ + N
Sbjct: 228 NCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVAN 287

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYAKC  +   GRVF  M  +D++SW T+++G  QN  +  AL  FR +Q  G   
Sbjct: 288 ALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKP 347

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D + + +++ A      + + KE+H Y IR GL S++ I N +VD+Y KC  + Y  + F
Sbjct: 348 DQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAF 407

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  KD++SWT++I+ Y  N    EA+ LF  +    ++ D + + S L A S L    
Sbjct: 408 ECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRN 467

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
             +E++G++ ++    +  + +++V++Y   G +D A + F  +++KD++ WTSMI    
Sbjct: 468 FIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCV 526

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            +G    A++LFY ++  +  PD I  ++ L A ++   + +GK+
Sbjct: 527 HNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKE 571



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 280/544 (51%), Gaps = 29/544 (5%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++HA  +KS  +L  ++A  L+ MY +CG + +A  V  ++  +   SWN+++  FV 
Sbjct: 65  GQQLHALLLKS--HLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVS 122

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +  Y +A++ +++++  G   D     + + A G LG    G E+H  A+K G+   + +
Sbjct: 123 SGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFV 182

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQ---MTAQDFISWTTIIAGY-AQNNCHLKALELFRTVQ 354
            N L+ MY KC  +    RV +    M  +D +SW +II+ + A+ NC L+AL LFR +Q
Sbjct: 183 CNALIAMYGKCGDLG-GARVLFDGIMMEKEDTVSWNSIISAHVAEGNC-LEALSLFRRMQ 240

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNID 413
             G+ ++     + L        +     IHG +++    +D+ + NA++ +Y KCG ++
Sbjct: 241 EVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRME 300

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  VFES+  +D VSW +++S  V N L ++AL  F  M  +  + D +++++ ++A+ 
Sbjct: 301 DAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASG 360

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
               L KGKE++ + IR G +    + ++LVDMYA+C  +      F C+  KDLI WT+
Sbjct: 361 RSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTT 420

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCD 592
           +I     +     AI+LF K++ +    D +   ++L AC  SGL  + + F+ EI    
Sbjct: 421 IIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRAC--SGL--KSRNFIREIHGYV 476

Query: 593 YQLDPWPEHYA-CLVDLLGRANHLE---EAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           ++ D         +V++ G   H++    A++ +RS  I      W +++  C VH+   
Sbjct: 477 FKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVS----WTSMITCC-VHNGLP 531

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAAS-----RKWKDVEQVRMRMRGSGLKKTPGSS 703
           +  +     L+     P +  +IS + A +     +K K++    +R +G  L+    SS
Sbjct: 532 VEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR-KGFFLEGPIASS 590

Query: 704 WIEI 707
            +++
Sbjct: 591 LVDM 594


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score = 1127 bits (2915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/836 (62%), Positives = 663/836 (79%), Gaps = 1/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA ++FD++++RT+FTWNAM+GA+VS+G+ L  +E Y  MRVLG+++DA T
Sbjct: 88  MYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACT 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR-M 119
           FP V+KAC  L +   GA+IHG+ +KCG+    F+ N+L+AMY KC D   AR LFD  M
Sbjct: 148 FPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIM 207

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EKED V WNSIISA+   G+CLEAL LFR MQ VG+ +N YTFVAALQ  ED SF  LG
Sbjct: 208 MEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG 267

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           M IH A +KS     VYVANALIAMYA+CG+M +A  V   +  +D VSWN++L+G VQN
Sbjct: 268 MGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQN 327

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +LY  A+ +FR++Q + QKPDQV  +N ++ASGR GNLLNGKE+HAYAI+ G  S++QIG
Sbjct: 328 ELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIG 387

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           NTL+DMYAKCCCV +MG  F  M  +D ISWTTIIAGYAQN CHL+A+ LFR VQ++G+D
Sbjct: 388 NTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMD 447

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
            D M+IGSVL ACSGLK  +  +EIHGY+ ++ L+D+++ NAIV+VYG+ G+ DY+R  F
Sbjct: 448 VDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAF 507

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           ESI SKD+VSWTSMI+  VHNGL  EALELFY + + N++ DSI ++SALSA ++LS LK
Sbjct: 508 ESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLK 567

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           KGKE++GF+IRKGF LEG +ASSLVDMYA CG ++ + K+F+ V+ +DLILWTSMINANG
Sbjct: 568 KGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANG 627

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HG G  AI LF KM  E+  PDHITFLALLYACSHSGL+ EGK+F EIM+  YQL+PWP
Sbjct: 628 MHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWP 687

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC+VDLL R+N LEEAYQFVRSM I+P++EVWCALLGAC +HSNKELGE+ AK+LL+
Sbjct: 688 EHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQ 747

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            D  N G Y LISN+FAA  +W DVE+VR+RM+G+GLKK PG SWIE+ NKIH+F+ARDK
Sbjct: 748 SDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDK 807

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH ++D+IY KLA+ T+ L ++GGY+AQT+FV HNV EEEK QMLY HSERLA+ YG+L 
Sbjct: 808 SHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLV 867

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +G+ IRITKNLR+C DCH+F K+ S +  R LVVRDANRFHHFE G+CSCGD+W
Sbjct: 868 TPKGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923



 Score =  282 bits (721), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 165/525 (31%), Positives = 284/525 (54%), Gaps = 9/525 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++  C  +K L  G ++H  +LK    +  F+   L+ MY KC   + A ++FD M E+ 
Sbjct: 52  LLDLCVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTERT 109

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            +  WN+++ A+ +SG+ LEA+ L++EM+ +G+  +A TF + L+AC       LG EIH
Sbjct: 110 -IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ---LENKDSVSWNSMLTGFVQND 240
              VK G    V+V NALIAMY +CG +   A VL+    +E +D+VSWNS+++  V   
Sbjct: 169 GVAVKCGFGEFVFVCNALIAMYGKCGDLG-GARVLFDGIMMEKEDTVSWNSIISAHVTEG 227

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  FR +Q  G   +    V A+        +  G  +H  A+K    +D+ + N
Sbjct: 228 KCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVAN 287

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYAKC  +    RVF  M  +D++SW T+++G  QN  +  AL  FR +Q      
Sbjct: 288 ALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKP 347

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D + + +++ A      +   KE+H Y IR GL S++ I N ++D+Y KC  + +    F
Sbjct: 348 DQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAF 407

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  KD++SWT++I+ Y  N    EA+ LF  +    ++ D + + S L A S L    
Sbjct: 408 ECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRN 467

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
             +E++G++ ++    +  + +++V++Y   G  D A + F  +++KD++ WTSMI    
Sbjct: 468 FIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCV 526

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            +G    A++LFY ++  +  PD I  ++ L A ++   + +GK+
Sbjct: 527 HNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKE 571


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score = 1107 bits (2862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/836 (62%), Positives = 651/836 (77%), Gaps = 1/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS  DA ++FDK+S+RT+FTWNAM+GA VS G  +  +E Y  MRVLG+S+DAFT
Sbjct: 91  MYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFT 150

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR-M 119
           FPCV+KAC   K+   G +IHG+ +KCGY    F+ N+L+AMYAKC D   AR LFD  +
Sbjct: 151 FPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGL 210

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK+D V WNSIISA+   G+ LEAL LFR MQ VG+ +N YTFV+ALQACE  +F  +G
Sbjct: 211 MEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIG 270

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IHA  +KS     VYV+NALIAMYA CG+M +A  V   +  KD VSWN++L+G VQN
Sbjct: 271 RGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQN 330

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           D+Y  A+  F+++Q +GQKPDQV  +N ++ASGR  NLL G E+HAYAIK G  S++ IG
Sbjct: 331 DMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIG 390

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+DMY KCCCV YMG  F  M  +D ISWTTIIAGYAQN CHL AL L R VQLE +D
Sbjct: 391 NSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMD 450

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
            D M+IGS+L+ACSGLK     KEIHGY+++ GL+D++I NAIV+VYG+   +DY+R+VF
Sbjct: 451 VDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVF 510

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           ESI SKD+VSWTSMI+  VHNGLA EALELF  + E N+E D ITLVS L AA++LS LK
Sbjct: 511 ESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLK 570

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           KGKE++GF+IRKGF LEG +A+SLVDMYARCG ++ A  +FN V+ +DLILWTSMINANG
Sbjct: 571 KGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANG 630

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HG GK AIDLF KM  E+  PDHITFLALLYACSHSGL+ EGK+  EIM+ +Y+L+PWP
Sbjct: 631 MHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWP 690

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYACLVDLL R+N LEEAY FVR+M IEP+AEVWCALLGACR+HSN +LGE+ AKKLL+
Sbjct: 691 EHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQ 750

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+  N GNYVL+SN FAA  +W DVE+VR  M+G+ LKK PG SWIE+ NKIH+F+ARDK
Sbjct: 751 LNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDK 810

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH + + IY KLA+ T+ L+ +GGY AQT+ V H+V EEEK QMLYGHSERLA+ YG+L 
Sbjct: 811 SHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLV 870

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +++G+ +RITKNLR+C DCH+F K+ S +  R LVVRDA+RFHHFE G+CSCGD+W
Sbjct: 871 TSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 181/589 (30%), Positives = 316/589 (53%), Gaps = 18/589 (3%)

Query: 65  IKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++ CA  K L  G ++H   LK   Y  + F+    V MY KC  F  A ++FD+M E+ 
Sbjct: 53  LELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERT 112

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            +  WN++I A  ++G+ +EA+ L++EM+ +G+  +A+TF   L+AC       LG EIH
Sbjct: 113 -IFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIH 171

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ---LENKDSVSWNSMLTGFVQND 240
              VK G    V+V NALIAMYA+CG +   A VL+    +E  D VSWNS+++  V   
Sbjct: 172 GVAVKCGYGGFVFVCNALIAMYAKCGDLG-GARVLFDSGLMEKDDPVSWNSIISAHVGEG 230

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  FR +Q  G + +    V+A+ A      +  G+ +HA  +K    +D+ + N
Sbjct: 231 ESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSN 290

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYA C  +    RVF  M  +D +SW T+++G  QN+ +  A+  F+ +Q  G   
Sbjct: 291 ALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKP 350

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D + + +++ A      +    E+H Y I+ G+ S++ I N+++D+YGKC  + Y  + F
Sbjct: 351 DQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAF 410

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  KD++SWT++I+ Y  N    +AL L   +    ++ D + + S L A S L   K
Sbjct: 411 EYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEK 470

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
             KE++G++++ G   +  + +++V++Y     +D A  VF  + +KD++ WTSMI    
Sbjct: 471 LIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCV 529

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPW 598
            +G    A++LF  +   +  PD IT +++LYA +    + +GK+    ++R  + L+  
Sbjct: 530 HNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGL 589

Query: 599 PEHYACLVDLLGRANHLEEA---YQFVRSMQIEPTAEVWCALLGACRVH 644
             +   LVD+  R   +E A   + +V+   +     +W +++ A  +H
Sbjct: 590 IAN--SLVDMYARCGTMENARNIFNYVKQRDL----ILWTSMINANGMH 632



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 215/424 (50%), Gaps = 8/424 (1%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVLYQL 221
           +  AL+ C        G ++HA  +K+   L  V++    + MY +CG   +A  V  ++
Sbjct: 49  YSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKM 108

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             +   +WN+M+   V    Y +A++ ++E++  G   D       + A G       G 
Sbjct: 109 SERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGC 168

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ---MTAQDFISWTTIIAGYA 338
           E+H  A+K G+   + + N L+ MYAKC  +    RV +    M   D +SW +II+ + 
Sbjct: 169 EIHGVAVKCGYGGFVFVCNALIAMYAKCGDLG-GARVLFDSGLMEKDDPVSWNSIISAHV 227

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLV 397
                L+AL LFR +Q  G++++     S L AC G   +   + IH  I++    +D+ 
Sbjct: 228 GEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVY 287

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           + NA++ +Y  CG ++ +  VF+S+  KD VSW +++S  V N + ++A+  F  M ++ 
Sbjct: 288 VSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSG 347

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
            + D +++++ ++A+   + L  G E++ + I+ G +    + +SL+DMY +C  +    
Sbjct: 348 QKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMG 407

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
             F  +  KDLI WT++I     +     A++L  K++ E    D +   ++L AC  SG
Sbjct: 408 SAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLAC--SG 465

Query: 578 LINE 581
           L +E
Sbjct: 466 LKSE 469



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 20/320 (6%)

Query: 369 LMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNA-IVDVYGKCGNIDYSRNVFESIESKD 426
           L  C+  K + Q +++H + ++ +   D V L+   V +YGKCG+   +  VF+ +  + 
Sbjct: 53  LELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERT 112

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
           + +W +MI + V  G   EA+EL+  M    V  D+ T    L A  +    + G E++G
Sbjct: 113 IFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHG 172

Query: 487 FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC--VQTKDLILWTSMINANGLHGRG 544
             ++ G+     V ++L+ MYA+CG L  A  +F+   ++  D + W S+I+A+   G  
Sbjct: 173 VAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGES 232

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA- 603
             A+ LF +M+      +  TF++ L AC       EG  F++I R  + +     H+  
Sbjct: 233 LEALSLFRRMQEVGVESNTYTFVSALQAC-------EGPTFIKIGRGIHAVILKSNHFTD 285

Query: 604 -----CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
                 L+ +      +E+A +  +SM  +     W  LL    +  N    + +     
Sbjct: 286 VYVSNALIAMYANCGQMEDAERVFKSMLFKDCVS-WNTLLSG--MVQNDMYSDAINHFQD 342

Query: 659 ELDPGNPGNYVLISNVFAAS 678
             D G   + V + N+ AAS
Sbjct: 343 MQDSGQKPDQVSVLNMIAAS 362


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score = 1037 bits (2682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/836 (59%), Positives = 645/836 (77%), Gaps = 1/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ DAE++FD++  RT F WN M+GAYVSNGEP   L  Y  MRV G+ +   +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP ++KACA L+D+  G+++H L++K GY ST FIVN+LV+MYAK  D   AR+LFD   
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK D VLWNSI+S+YS SG+ LE L LFREM   G   N+YT V+AL AC+  S+  LG 
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304

Query: 181 EIHAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           EIHA+ +KS   + ++YV NALIAMY RCGKM +A  +L Q+ N D V+WNS++ G+VQN
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            +Y +A++FF ++  AG K D+V   + ++ASGRL NLL G ELHAY IK G+ S+LQ+G
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           NTL+DMY+KC    YMGR F +M  +D ISWTT+IAGYAQN+CH++ALELFR V  + ++
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
            D MI+GS+L A S LK M   KEIH +I+RKGL D VI N +VDVYGKC N+ Y+  VF
Sbjct: 485 IDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVF 544

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           ESI+ KDVVSWTSMISS   NG  +EA+ELF  M E  + +DS+ L+  LSAA+SLS L 
Sbjct: 545 ESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALN 604

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           KG+E++ +++RKGF LEGS+A ++VDMYA CG L  A  VF+ ++ K L+ +TSMINA G
Sbjct: 605 KGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYG 664

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HG GK A++LF KM  E+ +PDHI+FLALLYACSH+GL++EG+ FL+IM  +Y+L+PWP
Sbjct: 665 MHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWP 724

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY CLVD+LGRAN + EA++FV+ M+ EPTAEVWCALL ACR HS KE+GEI A++LLE
Sbjct: 725 EHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE 784

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P NPGN VL+SNVFA   +W DVE+VR +M+ SG++K PG SWIE+  K+H F ARDK
Sbjct: 785 LEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDK 844

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH ES EIY+KL+E+T KLERE GYVA T+FVLHNV+E EKVQML+GHSER+AIAYG+L+
Sbjct: 845 SHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLR 904

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + + + +RITKNLRVC DCH+FCKLVS+LF R++V+RDANRFHHFE+G+CSCGD W
Sbjct: 905 TPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 167/546 (30%), Positives = 287/546 (52%), Gaps = 6/546 (1%)

Query: 44  ETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYD-STDFIVNSLVAM 102
           E + R+ V   +     F  V++ C   + +  G ++H  + K       DF+   LV M
Sbjct: 66  EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125

Query: 103 YAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYT 162
           Y KC     A ++FD M ++     WN++I AY ++G+   AL L+  M+  G+     +
Sbjct: 126 YGKCGSLDDAEKVFDEMPDR-TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
           F A L+AC        G E+H+  VK G +   ++ NAL++MYA+   ++ A  +    +
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244

Query: 223 NK-DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
            K D+V WNS+L+ +  +    + ++ FRE+   G  P+    V+A++A         GK
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304

Query: 282 ELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           E+HA  +K     S+L + N L+ MY +C  +    R+  QM   D ++W ++I GY QN
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
             + +ALE F  +   G  +D + + S++ A   L  +    E+H Y+I+ G  S+L + 
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N ++D+Y KC    Y    F  +  KD++SWT++I+ Y  N    EALELF  + +  +E
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            D + L S L A+S L  +   KE++  I+RKG  L+  + + LVD+Y +C  +  A +V
Sbjct: 485 IDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRV 543

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  ++ KD++ WTSMI+++ L+G    A++LF +M     + D +  L +L A +    +
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSAL 603

Query: 580 NEGKKF 585
           N+G++ 
Sbjct: 604 NKGREI 609



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 226/453 (49%), Gaps = 8/453 (1%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTN---AYTFVAALQACEDSSFETLGMEIHAA 185
           N  +   S    C + + L    QR+ +  N      F   L+ C      + G ++H+ 
Sbjct: 47  NQPVQVPSPKLACFDGV-LTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSR 105

Query: 186 TVKSGQNLQV-YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             K+  + ++ ++A  L+ MY +CG + +A  V  ++ ++ + +WN+M+  +V N     
Sbjct: 106 IFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPAS 165

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  +  ++  G           + A  +L ++ +G ELH+  +K G+ S   I N L+ 
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225

Query: 305 MYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           MYAK   ++   R+F     + D + W +I++ Y+ +   L+ LELFR + + G   +  
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFES 421
            I S L AC G       KEIH  +++     S+L + NA++ +Y +CG +  +  +   
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           + + DVV+W S+I  YV N +  EALE F  M  A  +SD +++ S ++A+  LS L  G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
            EL+ ++I+ G++    V ++L+DMY++C       + F  +  KDLI WT++I     +
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
                A++LF  +  +    D +   ++L A S
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASS 498



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 141/285 (49%), Gaps = 9/285 (3%)

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVIL-NAIVDV 405
           E F+ + +   ++ V     VL  C   + +SQ +++H  I +   S +L  L   +V +
Sbjct: 66  EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           YGKCG++D +  VF+ +  +   +W +MI +YV NG    AL L++ M    V     + 
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            + L A + L  ++ G EL+  +++ G++  G + ++LV MYA+   L  A ++F+  Q 
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245

Query: 526 K-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           K D +LW S++++    G+    ++LF +M     AP+  T ++ L AC        GK+
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305

Query: 585 F-LEIMRCDYQLDPWPEHYAC--LVDLLGRANHLEEAYQFVRSMQ 626
               +++         E Y C  L+ +  R   + +A + +R M 
Sbjct: 306 IHASVLKSSTHSS---ELYVCNALIAMYTRCGKMPQAERILRQMN 347


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  942 bits (2435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/838 (53%), Positives = 595/838 (71%), Gaps = 4/838 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL---GISVD 57
           MYGKCG V DA  LFD +S RTVF+WNA++GAY+S+G     L  Y  MR+    G++ D
Sbjct: 104 MYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPD 163

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             T   V+KA  +  D  CG ++HGL +K G D + F+ N+L+AMYAKC     A ++F+
Sbjct: 164 GCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFE 223

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            M +  DV  WNS+IS    +G  L+AL LFR MQR  L  N+YT V  LQ C + +   
Sbjct: 224 LMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLN 283

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LG E+HAA +KSG  + +   NAL+ MY +CG++  A  V  +++ KD +SWNSML+ +V
Sbjct: 284 LGRELHAALLKSGSEVNIQ-CNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYV 342

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN LY +A++F  E+   G +PD  C V+  SA G LG LLNGKE+HAYAIKQ   SD Q
Sbjct: 343 QNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQ 402

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +GNTLMDMY KC  + Y   VF +M  +D ISWTTII  YAQ++ H++ALE+FR  Q EG
Sbjct: 403 VGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEG 462

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
           +  D M+IGS+L ACSGL+ +   K++H Y IR GL DLV+ N I+D+YG+CG + +S  
Sbjct: 463 IKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLK 522

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +FE++E KD+V+WTSMI+ Y ++GL NEAL LF  M   +V+ DS+ LVS L A   LS 
Sbjct: 523 MFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSS 582

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L KGKE++GF+IR+ F++E ++ SSLVDMY+ CG+L  A KVFN V+ KD++LWT+MINA
Sbjct: 583 LAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINA 642

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G+HG GK AIDLF +M      PDH++FLALLYACSHS L+NEGK +L++M   Y+L+P
Sbjct: 643 TGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEP 702

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
           W EHYAC+VDLLGR+   EEAY+F++SM ++P + VWC+LLGACRVH N EL  + A +L
Sbjct: 703 WQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRL 762

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           LEL+P NPGNYVL+SNVFA   KW + ++VR R+   GL+K P  SWIEIGN +H+F  R
Sbjct: 763 LELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTR 822

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D SH +++ I  KLAEITE+L +EGGY   T+ VLH+V EEEKV +L+ HSERLAI++G+
Sbjct: 823 DNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGL 882

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +  G  +RI KNLRVC DCH F KLVS+LF R++VVRDANRFHHF  G CSCGD+W
Sbjct: 883 INTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  286 bits (732), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 189/604 (31%), Positives = 316/604 (52%), Gaps = 14/604 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTD--FIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           V+   A  K +  G ++H   +  G    D  F+   L+ MY KC     AR LFD M  
Sbjct: 64  VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSS 123

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQ---RVGLVTNAYTFVAALQACEDSSFETL 178
           +  V  WN++I AY +SG   EALG++R M+     G+  +  T  + L+A         
Sbjct: 124 RT-VFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRC 182

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLTGFV 237
           G E+H   VK G +   +VANALIAMYA+CG +  A  V   + + +D  SWNSM++G +
Sbjct: 183 GCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCL 242

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN ++ +A+  FR +Q A    +   TV  +     L  L  G+ELHA  +K G   ++Q
Sbjct: 243 QNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQ 302

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
             N L+ MY KC  V+   RVF ++  +D+ISW ++++ Y QN  + +A+E    +   G
Sbjct: 303 C-NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGG 361

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
              D   I S+  A   L  +   KE+H Y I++ L SD  + N ++D+Y KC  I+YS 
Sbjct: 362 FQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSA 421

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           +VF+ +  KD +SWT++I+ Y  +    EALE+F    +  ++ D + + S L A S L 
Sbjct: 422 HVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLE 481

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            +   K+L+ + IR G  L+  V + ++D+Y  CG +  + K+F  V+ KD++ WTSMIN
Sbjct: 482 TILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMIN 540

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQL 595
                G    A+ LF +M++    PD +  +++L A      + +GK+    ++R ++ +
Sbjct: 541 CYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHM 600

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           +      + LVD+      L  A +   +++ +    +W A++ A  +H + +    + K
Sbjct: 601 E--EAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMV-LWTAMINATGMHGHGKQAIDLFK 657

Query: 656 KLLE 659
           ++L+
Sbjct: 658 RMLQ 661



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 8/248 (3%)

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNA 401
           +AL L  T Q  G        G VL   +  K ++Q  ++H + +  G     D  +   
Sbjct: 42  QALRLL-TSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATK 100

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN---EANV 458
           ++ +YGKCG +  +R +F+ + S+ V SW ++I +Y+ +G A EAL ++  M     + V
Sbjct: 101 LLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGV 160

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
             D  TL S L A+      + G E++G  ++ G +    VA++L+ MYA+CG LD A +
Sbjct: 161 APDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMR 220

Query: 519 VFNCVQT-KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           VF  +   +D+  W SMI+    +G    A+DLF  M+    + +  T + +L  C+   
Sbjct: 221 VFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELA 280

Query: 578 LINEGKKF 585
            +N G++ 
Sbjct: 281 QLNLGREL 288


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  935 bits (2417), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/773 (58%), Positives = 588/773 (76%), Gaps = 2/773 (0%)

Query: 5   CGS--VLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFP 62
           CG    L  E++FD++  RT F WNA++GAYVSNGEP   L  Y  MRV G+ +D ++FP
Sbjct: 107 CGKSRALSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFP 166

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
            ++KAC  L+D+  G ++H +++K G++ST FIVN+LV+MYAK      A++LFD   EK
Sbjct: 167 VLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEK 226

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D VLWNSI+S+YS SG+ LE L LFREMQ  G  +N+YT V+AL ACE  S+  LG EI
Sbjct: 227 GDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEI 286

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HAA +KS  + +VYV NALIAMYARCGKM EA  +L  + N D V+WNS++ G+VQN +Y
Sbjct: 287 HAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMY 346

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A+QFF ++  AG KPD+V   + ++ASGRL NLL G ELHAY IK G+ S+L +GNTL
Sbjct: 347 KEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTL 406

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMY+KC    YMGR F  M  +D ISWTTIIAGYA N+CH++AL+LFR V  + ++ D 
Sbjct: 407 IDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDE 466

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
           M++GS+L ACS LK M   KEIH +I+RKGL D VI N +VDVYGKC N+ Y+  VFESI
Sbjct: 467 MMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTVIQNELVDVYGKCRNMGYASRVFESI 526

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
           + KDVVSWTSMISS   NG  NEA+ELF  M E  + +DS+ L+  LSAA+SLS LKKG+
Sbjct: 527 KGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGR 586

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           E++G+++RKGF LEGS+A ++VDMYA CG L  A  VF+ ++ K L+ +TSMINA G+HG
Sbjct: 587 EIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHG 646

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
            GK +++LF KM  E+ +PDHI+FLALLYACSH+GL++EG++FL+IM  +Y+L+PWPEHY
Sbjct: 647 CGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHY 706

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
            CLVD+LGRAN + EA++FV+ M+ EPT EVWCALL ACR HS KE+GEI A++LLEL+P
Sbjct: 707 VCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEP 766

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
            NPGN VL+SNVFA   +W DVE+VR +M+ SG++K PG SWIE+  K+H F ARDKSH 
Sbjct: 767 KNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHP 826

Query: 723 ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
           E+ EIY+KL+E+T KLERE GY+A T+F+LHNV+E EKVQML+GHSERLAIAY
Sbjct: 827 ETKEIYEKLSEVTRKLERESGYLADTKFILHNVDEGEKVQMLHGHSERLAIAY 879



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 191/373 (51%), Gaps = 2/373 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG +L+A ++   ++   V TWN+++  YV N      L+ +  M   G   D  +
Sbjct: 308 MYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVS 367

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI A   L +L  G ++H  V+K G+DS   + N+L+ MY+KC       + F  M 
Sbjct: 368 LTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMH 427

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK D++ W +II+ Y+ +   +EAL LFR++ +  +  +     + L+AC       +  
Sbjct: 428 EK-DLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVK 486

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   ++ G  +   + N L+ +Y +C  M  A+ V   ++ KD VSW SM++    N 
Sbjct: 487 EIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNG 545

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ FR +   G   D V  +  +SA+  L  L  G+E+H Y +++GF  +  I  
Sbjct: 546 NENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAV 605

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++DMYA C  +     VF ++  +  + +T++I  Y  + C   ++ELF  ++ E +  
Sbjct: 606 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSP 665

Query: 361 DVMIIGSVLMACS 373
           D +   ++L ACS
Sbjct: 666 DHISFLALLYACS 678



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 44/80 (55%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG +  A+ +FD++ ++ +  + +M+ AY  +G     +E +++MR   +S D  +
Sbjct: 610 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHIS 669

Query: 61  FPCVIKACAMLKDLDCGAKI 80
           F  ++ AC+    LD G + 
Sbjct: 670 FLALLYACSHAGLLDEGRRF 689


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  927 bits (2396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/782 (57%), Positives = 590/782 (75%), Gaps = 3/782 (0%)

Query: 5   CGS--VLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFP 62
           CG    +  E++FD++  RT F WN M+GAYVSNGEP   L  Y  MRV G+ +   +FP
Sbjct: 90  CGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 149

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
            ++KACA L+D+  G+++H L++K GY ST FIVN+LV+MYAK  D   AR+LFD   EK
Sbjct: 150 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 209

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D VLWNSI+S+YS SG+ LE L LFREM   G   N+YT V+AL AC+  S+  LG EI
Sbjct: 210 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 269

Query: 183 HAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           HA+ +KS   + ++YV NALIAMY RCGKM +A  +L Q+ N D V+WNS++ G+VQN +
Sbjct: 270 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 329

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           Y +A++FF ++  AG K D+V   + ++ASGRL NLL G ELHAY IK G+ S+LQ+GNT
Sbjct: 330 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNT 389

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMY+KC    YMGR F +M  +D ISWTT+IAGYAQN+CH++ALELFR V  + ++ D
Sbjct: 390 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEID 449

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES 421
            MI+GS+L A S LK M   KEIH +I+RKGL D VI N +VDVYGKC N+ Y+  VFES
Sbjct: 450 EMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFES 509

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           I+ KDVVSWTSMISS   NG  +EA+ELF  M E  + +DS+ L+  LSAA+SLS L KG
Sbjct: 510 IKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKG 569

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           +E++ +++RKGF LEGS+A ++VDMYA CG L  A  VF+ ++ K L+ +TSMINA G+H
Sbjct: 570 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 629

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G GK A++LF KM  E+ +PDHI+FLALLYACSH+GL++EG+ FL+IM  +Y+L+PWPEH
Sbjct: 630 GCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEH 689

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           Y CLVD+LGRAN + EA++FV+ M+ EPTAEVWCALL ACR HS KE+GEI A++LLEL+
Sbjct: 690 YVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELE 749

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
           P NPGN VL+SNVFA   +W DVE+VR +M+ SG++K PG SWIE+  K+H F ARDKSH
Sbjct: 750 PKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSH 809

Query: 722 SESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKST 781
            ES EIY+KL+E+T KLERE GYVA T+FVLHNV+E EKVQML+GHSER+AIAYG  +++
Sbjct: 810 PESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGKERAS 869

Query: 782 EG 783
           +G
Sbjct: 870 KG 871



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 191/373 (51%), Gaps = 2/373 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG +  AE++  +++   V TWN+++  YV N      LE +S M   G   D  +
Sbjct: 292 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 351

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I A   L +L  G ++H  V+K G+DS   + N+L+ MY+KC       + F RM 
Sbjct: 352 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH 411

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K D++ W ++I+ Y+ +   +EAL LFR++ +  +  +     + L+A        +  
Sbjct: 412 DK-DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 470

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   ++ G  L   + N L+ +Y +C  M  A  V   ++ KD VSW SM++    N 
Sbjct: 471 EIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG 529

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ FR +   G   D V  +  +SA+  L  L  G+E+H Y +++GF  +  I  
Sbjct: 530 NESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV 589

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++DMYA C  +     VF ++  +  + +T++I  Y  + C   A+ELF  ++ E +  
Sbjct: 590 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 649

Query: 361 DVMIIGSVLMACS 373
           D +   ++L ACS
Sbjct: 650 DHISFLALLYACS 662



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 42/77 (54%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG +  A+ +FD++ ++ +  + +M+ AY  +G     +E + +MR   +S D  +
Sbjct: 594 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 653

Query: 61  FPCVIKACAMLKDLDCG 77
           F  ++ AC+    LD G
Sbjct: 654 FLALLYACSHAGLLDEG 670


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  923 bits (2386), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/839 (52%), Positives = 586/839 (69%), Gaps = 5/839 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR----VLGISV 56
           MYGKCG + DA +LFD +  RTVF+WNA++GA +S+G     +  Y  MR    V G + 
Sbjct: 102 MYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAP 161

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D  T   V+KAC    D  CG+++HGL +K G D +  + N+LV MYAKC     A ++F
Sbjct: 162 DGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVF 221

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           + M +  DV  WNS IS    +G  LEAL LFR MQ  G   N+YT V  LQ C + +  
Sbjct: 222 EWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQL 281

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G E+HAA +K G    +   NAL+ MYARCG +  A  V  ++ +KD +SWNSML+ +
Sbjct: 282 NHGRELHAALLKCGTEFNIQ-CNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCY 340

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           VQN LY +A+ FF E+   G  PD  C V+ +SA G LG L+NG+E+HAYA+KQ   SDL
Sbjct: 341 VQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDL 400

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
           QI NTLMDMY KC  V    RVF +M  +D +SWTTIIA YAQ++ + +A+  FRT Q E
Sbjct: 401 QIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKE 460

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
           G+  D M++GS+L ACSGLK +S  K++H Y IR GL DL++ N I+D+YG+CG + Y+ 
Sbjct: 461 GIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYAL 520

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           N+FE ++ KD+V+WTSM++ +  NGL +EA+ LF  M  A ++ DS+ LV  L A + LS
Sbjct: 521 NIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLS 580

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L KGKE++GF+IR  F +EG+V SSLVDMY+ CG+++ A KVF+  + KD++LWT+MIN
Sbjct: 581 SLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMIN 640

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           A G+HG GK AI +F +M     +PDH++FLALLYACSHS L++EGK +L++M   Y+L 
Sbjct: 641 ATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQ 700

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           PW EHYAC+VDLLGR+   EEAY+F++SM +EP + VWCALLGACR+H N EL  I   K
Sbjct: 701 PWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDK 760

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           LLEL+P NPGNYVL+SNVFA   KW +V+++R +M   GL+K P  SWIEIGN +H+F A
Sbjct: 761 LLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTA 820

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
           RD SH +S  I+ KLAEITEKL REG YV  T FVLH+V EEEK+ +L+ HSERLAI++G
Sbjct: 821 RDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFG 880

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ +  G+ +RI KNLRVC DCH F KLVS+LF RE+VVRDANRFHHF  G CSCGD+W
Sbjct: 881 LISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939



 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 201/703 (28%), Positives = 348/703 (49%), Gaps = 26/703 (3%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY---DSTDF 94
           E LR L   S         D + +  V+   A+ + +  G ++H   +  G    D   F
Sbjct: 37  EALRQLAARSARGRAPPPTDHYGW--VLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGF 94

Query: 95  IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR- 153
           +   L+ MY KC     A +LFD M  +  V  WN++I A  +SG   EA+G++R M+  
Sbjct: 95  LATKLLFMYGKCGRLPDAHRLFDGMPART-VFSWNALIGACLSSGGAGEAVGVYRAMRAS 153

Query: 154 ---VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
               G   +  T  + L+AC        G E+H   VKSG +    VANAL+ MYA+CG 
Sbjct: 154 EPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGL 213

Query: 211 MTEAAGVL-YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
           +  A  V  +  + +D  SWNS ++G VQN ++ +A+  FR +Q  G   +   TV  + 
Sbjct: 214 LDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQ 273

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
               L  L +G+ELHA  +K G   ++Q  N L+ MYA+C  V+   RVF ++  +D+IS
Sbjct: 274 VCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYIS 332

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W ++++ Y QN  + +A++ F  +   G + D   I S+L A   L  +   +E+H Y +
Sbjct: 333 WNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAV 392

Query: 390 RKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           ++ L SDL I N ++D+Y KC +++ S  VF+ +  KD VSWT++I+ Y  +   +EA+ 
Sbjct: 393 KQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIG 452

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
            F    +  ++ D + + S L A S L  +   K+++ + IR G  L+  + + ++D+Y 
Sbjct: 453 KFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYG 511

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
            CG +  A  +F  +  KD++ WTSM+N    +G    A+ LF KM      PD +  + 
Sbjct: 512 ECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVG 571

Query: 569 LLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
           +L A +    + +GK+    ++R  + ++      + LVD+      +  A +     + 
Sbjct: 572 ILGAIAGLSSLTKGKEIHGFLIRGKFPVE--GAVVSSLVDMYSGCGSMNYALKVFDEAKC 629

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASR-KWKDVEQ 686
           +    +W A++ A  +H + +    + K++LE    +P +   ++ ++A S  K  D  +
Sbjct: 630 KDVV-LWTAMINATGMHGHGKQAIYIFKRMLETGV-SPDHVSFLALLYACSHSKLVDEGK 687

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYK 729
             + M  S  K  P   W E    +   + R     +++E YK
Sbjct: 688 FYLDMMVSKYKLQP---WQEHYACVVDLLGRS---GQTEEAYK 724


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  902 bits (2331), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/839 (51%), Positives = 577/839 (68%), Gaps = 5/839 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV---LGISVD 57
           MYG+CG V DA +LF+ +  RTVF+WNA++GAY+S+G     +  Y  MR     G + D
Sbjct: 104 MYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPD 163

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             T   V+KAC    D  CG ++HGL +K G D +  + N+L+ MYAKC     A ++F+
Sbjct: 164 GCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFE 223

Query: 118 RMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
            + +   DV  WNS++S    +G+ LEAL LFR MQ  G   N+YT VA LQ C +    
Sbjct: 224 WLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLL 283

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +LG E+HAA +K G  L +   NAL+ MYA+ G++  A  V  Q+  KD +SWNSML+ +
Sbjct: 284 SLGRELHAALLKCGSELNIQ-CNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCY 342

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           VQN  Y +A+ FF E+   G +PD  C V+  SA G L  L NG+E HAYAIKQ   +DL
Sbjct: 343 VQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDL 402

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
           Q+GNTLMDMY KC  +    +VF  M  +D ISWTTI+A +AQ++ H +ALE+   +Q E
Sbjct: 403 QVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKE 462

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
           G+  D M+IGS+L  C GLK +S  K++H Y IR GL DL++ N ++D+YG+CG  D+S 
Sbjct: 463 GIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSL 522

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           N+F+ +E KD+VSWTSMI+   +NG  N A+ LF  M +AN++ DS+ LVS L A + LS
Sbjct: 523 NLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLS 582

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L KGK+++GF+IR+ F +EG V SSLVDMY+ CG+++ A +VF   + KD++LWT+MIN
Sbjct: 583 SLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMIN 642

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           A G+HG GK AIDLF +M      PDH++FLALLYACSHS L+ EGK +L+IM   Y+L 
Sbjct: 643 ATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLK 702

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           PW EHYAC+VD+LGR+   EEAY+F+++M ++P + VWCALLGACRVH N  L  + A K
Sbjct: 703 PWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANK 762

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           LLEL+P NPGNY+L+SNVFA   KW + ++ R RM   GL+K P  SWIEIGN IH+F +
Sbjct: 763 LLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTS 822

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D  H +S+ I+ KL+EITE L REGGYV  T+FVLH+  EEEK+ ML+ HSER+AIA+G
Sbjct: 823 GDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFG 882

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ +  G  IRI KNLRVC DCH F KLVS+LF R++VVRDANRFHHF  G CSC D+W
Sbjct: 883 LISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 179/593 (30%), Positives = 309/593 (52%), Gaps = 16/593 (2%)

Query: 77  GAKIHGLVLKCGY---DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
           G ++H   +  G    D   F+   LV MY +C     AR+LF+ M  +  V  WN+++ 
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPART-VFSWNALVG 134

Query: 134 AYSASGQCLEAL---GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           AY +SG   EA+   G  R     G   +  T  + L+AC        G E+H   VK G
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            +    VANALI MYA+CG +  A  V    Q + +D  SWNS+++G VQN    +A+  
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALAL 254

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           FR +Q AG   +   +V  +     LG L  G+ELHA  +K G   ++Q  N L+ MYAK
Sbjct: 255 FRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALLVMYAK 313

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
              V+   RVF Q+  +D+ISW ++++ Y QN+ + +A++ F  +   G   D   + S+
Sbjct: 314 YGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSL 373

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
             A   L  ++  +E H Y I++ L +DL + N ++D+Y KCG+I+ S  VFES+  +D 
Sbjct: 374 SSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDH 433

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           +SWT++++ +  +   +EALE+   + +  +  DS+ + S L     L  +   K+++ +
Sbjct: 434 ISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCY 493

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
            IR G  L+  + + L+D+Y  CG  D +  +F  V+ KD++ WTSMIN    +GR   A
Sbjct: 494 AIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGA 552

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLV 606
           + LF +M+  +  PD +  +++L A +    + +GK+    ++R ++ ++      + LV
Sbjct: 553 VFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIE--GPVVSSLV 610

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           D+      +  A +     + +    +W A++ A  +H + +    + K++L+
Sbjct: 611 DMYSGCGSMNYAIRVFERAKCKDVV-LWTAMINATGMHGHGKQAIDLFKRMLQ 662



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 124/227 (54%), Gaps = 10/227 (4%)

Query: 380 QTKEIHGYIIRKGL----SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
           + +++H + +  G      D  +   +V +YG+CG +D +R +F  + ++ V SW +++ 
Sbjct: 75  EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134

Query: 436 SYVHNGLANEALELFYLMNEANVE---SDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           +Y+ +G A EA+ ++  M  +       D  TL S L A  +    + G E++G  ++ G
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQ--TKDLILWTSMINANGLHGRGKVAIDL 550
            +    VA++L+ MYA+CG LD A +VF  +Q   +D+  W S+++    +GR   A+ L
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALAL 254

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLD 596
           F  M++  F  +  T +A+L  C+  GL++ G++    +++C  +L+
Sbjct: 255 FRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELN 301


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/744 (58%), Positives = 561/744 (75%), Gaps = 1/744 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ DAE++FD++  RT F WN M+GAYVSNGEP   L  Y  MRV G+ +   +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP ++KACA L+D+  G+++H L++K GY ST FIVN+LV+MYAK  D   AR+LFD   
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK D VLWNSI+S+YS SG+ LE L LFREM   G   N+YT V+AL AC+  S+  LG 
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304

Query: 181 EIHAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           EIHA+ +KS   + ++YV NALIAMY RCGKM +A  +L Q+ N D V+WNS++ G+VQN
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            +Y +A++FF ++  AG K D+V   + ++ASGRL NLL G ELHAY IK G+ S+LQ+G
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           NTL+DMY+KC    YMGR F +M  +D ISWTT+IAGYAQN+CH++ALELFR V  + ++
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
            D MI+GS+L A S LK M   KEIH +I+RKGL D VI N +VDVYGKC N+ Y+  VF
Sbjct: 485 IDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVF 544

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           ESI+ KDVVSWTSMISS   NG  +EA+ELF  M E  + +DS+ L+  LSAA+SLS L 
Sbjct: 545 ESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALN 604

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           KG+E++ +++RKGF LEGS+A ++VDMYA CG L  A  VF+ ++ K L+ +TSMINA G
Sbjct: 605 KGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYG 664

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HG GK A++LF KM  E+ +PDHI+FLALLYACSH+GL++EG+ FL+IM  +Y+L+PWP
Sbjct: 665 MHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWP 724

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY CLVD+LGRAN + EA++FV+ M+ EPTAEVWCALL ACR HS KE+GEI A++LLE
Sbjct: 725 EHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE 784

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P NPGN VL+SNVFA   +W DVE+VR +M+ SG++K PG SWIE+  K+H F ARDK
Sbjct: 785 LEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDK 844

Query: 720 SHSESDEIYKKLAEITEKLEREGG 743
           SH ES EIY+KL+E+T KLERE G
Sbjct: 845 SHPESKEIYEKLSEVTRKLEREKG 868



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 167/546 (30%), Positives = 287/546 (52%), Gaps = 6/546 (1%)

Query: 44  ETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYD-STDFIVNSLVAM 102
           E + R+ V   +     F  V++ C   + +  G ++H  + K       DF+   LV M
Sbjct: 66  EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125

Query: 103 YAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYT 162
           Y KC     A ++FD M ++     WN++I AY ++G+   AL L+  M+  G+     +
Sbjct: 126 YGKCGSLDDAEKVFDEMPDR-TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
           F A L+AC        G E+H+  VK G +   ++ NAL++MYA+   ++ A  +    +
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244

Query: 223 NK-DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
            K D+V WNS+L+ +  +    + ++ FRE+   G  P+    V+A++A         GK
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304

Query: 282 ELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           E+HA  +K     S+L + N L+ MY +C  +    R+  QM   D ++W ++I GY QN
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
             + +ALE F  +   G  +D + + S++ A   L  +    E+H Y+I+ G  S+L + 
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N ++D+Y KC    Y    F  +  KD++SWT++I+ Y  N    EALELF  + +  +E
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            D + L S L A+S L  +   KE++  I+RKG  L+  + + LVD+Y +C  +  A +V
Sbjct: 485 IDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRV 543

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  ++ KD++ WTSMI+++ L+G    A++LF +M     + D +  L +L A +    +
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSAL 603

Query: 580 NEGKKF 585
           N+G++ 
Sbjct: 604 NKGREI 609



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 226/453 (49%), Gaps = 8/453 (1%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTN---AYTFVAALQACEDSSFETLGMEIHAA 185
           N  +   S    C + + L    QR+ +  N      F   L+ C      + G ++H+ 
Sbjct: 47  NQPVQVPSPKLACFDGV-LTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSR 105

Query: 186 TVKSGQNLQV-YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             K+  + ++ ++A  L+ MY +CG + +A  V  ++ ++ + +WN+M+  +V N     
Sbjct: 106 IFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPAS 165

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  +  ++  G           + A  +L ++ +G ELH+  +K G+ S   I N L+ 
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225

Query: 305 MYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           MYAK   ++   R+F     + D + W +I++ Y+ +   L+ LELFR + + G   +  
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFES 421
            I S L AC G       KEIH  +++     S+L + NA++ +Y +CG +  +  +   
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           + + DVV+W S+I  YV N +  EALE F  M  A  +SD +++ S ++A+  LS L  G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
            EL+ ++I+ G++    V ++L+DMY++C       + F  +  KDLI WT++I     +
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
                A++LF  +  +    D +   ++L A S
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASS 498



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 141/285 (49%), Gaps = 9/285 (3%)

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVIL-NAIVDV 405
           E F+ + +   ++ V     VL  C   + +SQ +++H  I +   S +L  L   +V +
Sbjct: 66  EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           YGKCG++D +  VF+ +  +   +W +MI +YV NG    AL L++ M    V     + 
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            + L A + L  ++ G EL+  +++ G++  G + ++LV MYA+   L  A ++F+  Q 
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245

Query: 526 K-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           K D +LW S++++    G+    ++LF +M     AP+  T ++ L AC        GK+
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305

Query: 585 F-LEIMRCDYQLDPWPEHYAC--LVDLLGRANHLEEAYQFVRSMQ 626
               +++         E Y C  L+ +  R   + +A + +R M 
Sbjct: 306 IHASVLKSSTHSS---ELYVCNALIAMYTRCGKMPQAERILRQMN 347


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/836 (39%), Positives = 531/836 (63%), Gaps = 3/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC     A +L D+ S+  V +W+++L  YV NG     L  ++ M +LG+  + FT
Sbjct: 25  LYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFT 84

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V+KAC+M +DL+ G K+HG+ +  G++S  F+ N+LV MYAKC     +R+LF  + 
Sbjct: 85  FPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIV 144

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +VV WN++ S Y  S  C EA+GLF+EM R G++ N ++    L AC       LG 
Sbjct: 145 ER-NVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGR 203

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K G +L  + ANAL+ MY++ G++  A  V   + + D VSWN+++ G V +D
Sbjct: 204 KIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHD 263

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+    E++G+G +P+     +A+ A   +G    G++LH+  IK    SDL    
Sbjct: 264 CNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAV 323

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  ++   R +  M  +D I+W  +I+GY+Q   HL A+ LF  +  E +D 
Sbjct: 324 GLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDF 383

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           +   + +VL + + L+ +   K+IH   I+ G+ SD  ++N+++D YGKC +ID +  +F
Sbjct: 384 NQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIF 443

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E    +D+V++TSMI++Y   G   EAL+L+  M +A+++ D     S L+A ++LS  +
Sbjct: 444 EERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYE 503

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GK+L+   I+ GF  +   ++SLV+MYA+CG+++ A++ F+ +  + ++ W++MI    
Sbjct: 504 QGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYA 563

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG GK A+ LF +M  +   P+HIT +++L AC+H+GL+NEGK++ E M   + + P  
Sbjct: 564 QHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQ 623

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC++DLLGR+  L EA + V S+  E    VW ALLGA R+H N ELG+  AK L +
Sbjct: 624 EHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFD 683

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P   G +VL++N++A++  W++V +VR  M+ S +KK PG SWIEI +K+++FI  D+
Sbjct: 684 LEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDR 743

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SHS SDEIY KL ++ + L +  GY +  +  +HNV++ EK ++LY HSE+LA+A+G++ 
Sbjct: 744 SHSRSDEIYAKLDQLGDLLSK-AGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIA 802

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +  G  IR+ KNLR+CVDCH+F K V ++  RE++VRD NRFHHF+ G CSCGDYW
Sbjct: 803 TPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 172/603 (28%), Positives = 315/603 (52%), Gaps = 12/603 (1%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H  ++K G+     + N LV +Y+KC  F  AR+L D   E  DVV W+S++S Y  +
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSEL-DVVSWSSLLSGYVQN 60

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G   EAL +F EM  +G+  N +TF + L+AC       +G ++H   V +G     +VA
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N L+ MYA+CG + ++  +   +  ++ VSWN++ + +VQ++L  +A+  F+E+  +G  
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P++      ++A   L     G+++H   +K G   D    N L+DMY+K   +     V
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F  +   D +SW  IIAG   ++C+  AL L   ++  G   ++  + S L AC+ +   
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300

Query: 379 SQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
              +++H  +I+    SDL     +VD+Y KC  +D +R  ++S+  KD+++W ++IS Y
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
              G   +A+ LF  M   +++ +  TL + L + +SL  +K  K+++   I+ G   + 
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDF 420

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            V +SL+D Y +C  +D A+K+F     +DL+ +TSMI A   +G G+ A+ L+ +M+  
Sbjct: 421 YVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDA 480

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
              PD     +LL AC++     +GK+  +  ++  +  D +  +   LV++  +   +E
Sbjct: 481 DIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASN--SLVNMYAKCGSIE 538

Query: 617 EAYQFVRSMQIEPTAEV--WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNV 674
           +A    R+    P   +  W A++G    H + +    +  ++L    G P N++ + +V
Sbjct: 539 DAD---RAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLR--DGVPPNHITLVSV 593

Query: 675 FAA 677
             A
Sbjct: 594 LCA 596



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 232/442 (52%), Gaps = 6/442 (1%)

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           ME+HA  +K G +    + N L+ +Y++C +   A  ++ +    D VSW+S+L+G+VQN
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  F E+   G K ++    + + A     +L  G+++H  A+  GF SD  + 
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           NTL+ MYAKC  ++   R+F  +  ++ +SW  + + Y Q+    +A+ LF+ +   G+ 
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            +   I  +L AC+GL+     ++IHG +++ GL  D    NA+VD+Y K G I+ +  V
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ I   DVVSW ++I+  V +   + AL L   M  +    +  TL SAL A +++   
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + G++L+  +I+   + +   A  LVDMY++C  +D A + ++ +  KD+I W ++I+  
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
              G    A+ LF KM +E    +  T   +L + +    I   K   +I     +   +
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCK---QIHTISIKSGIY 417

Query: 599 PEHYA--CLVDLLGRANHLEEA 618
            + Y    L+D  G+ NH++EA
Sbjct: 418 SDFYVINSLLDTYGKCNHIDEA 439


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/836 (37%), Positives = 520/836 (62%), Gaps = 4/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG+ + A+Q+FD + ++ V++WN +LG YV +G      + + +M    +  D  T
Sbjct: 154 MYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRT 213

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ ACA  +++D G +++ L+LK G+D+  F+  +L+ M+ KC D   A ++FD + 
Sbjct: 214 FVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLP 273

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+V W S+I+  +  G+  +A  LF+ M+  G+  +   FV+ L+AC        G 
Sbjct: 274 TR-DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGK 332

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA   + G + ++YV  A+++MY +CG M +A  V   ++ ++ VSW +M+ GF Q+ 
Sbjct: 333 KVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHG 392

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A  FF ++  +G +P++V  ++ + A      L  G+++  + I+ G+ SD ++  
Sbjct: 393 RIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRT 452

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYAKC  +    RVF +++ Q+ ++W  +I  Y Q+  +  AL  F+ +  EG+  
Sbjct: 453 ALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP 512

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           +     S+L  C     +   K +H  I++ GL SDL + NA+V ++  CG++  ++N+F
Sbjct: 513 NSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLF 572

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  +D+VSW ++I+ +V +G    A + F +M E+ ++ D IT    L+A +S   L 
Sbjct: 573 NDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALT 632

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +G+ L+  I    F+ +  V + L+ MY +CG+++ A++VF+ +  K++  WTSMI    
Sbjct: 633 EGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYA 692

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HGRGK A++LFY+M+ E   PD ITF+  L AC+H+GLI EG    + M+ ++ ++P  
Sbjct: 693 QHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRM 751

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C+VDL GRA  L EA +F+  MQ+EP + VW ALLGAC+VH N EL E  A+K LE
Sbjct: 752 EHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLE 811

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LDP + G +V++SN++AA+  WK+V ++R  M   G+ K PG SWIE+  K+H+F + DK
Sbjct: 812 LDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDK 871

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           +H +++EI+ +L  +  ++ R+ GYV  T++VLH+VE+ EK Q L+ HSERLAI YG+LK
Sbjct: 872 THPQTEEIHAELERLHMEM-RQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLK 930

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +   + I I+KNLRVC DCH+  K +S++  R+++ RD+NRFHHF+ GVCSCGD+W
Sbjct: 931 TPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 171/560 (30%), Positives = 298/560 (53%), Gaps = 2/560 (0%)

Query: 27  NAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLK 86
           NA+L      G+    ++   R+    I +   T+  +++ C   K+L  G +I+  + K
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138

Query: 87  CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALG 146
            G     F+ N+L+ MYAKC +   A+Q+FD M EK DV  WN ++  Y   G   EA  
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREK-DVYSWNLLLGGYVQHGLYEEAFK 197

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           L  +M +  +  +  TFV+ L AC D+     G E++   +K+G +  ++V  ALI M+ 
Sbjct: 198 LHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHI 257

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +CG + +A  V   L  +D V+W SM+TG  ++  + +A   F+ ++  G +PD+V  V+
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            + A      L  GK++HA   + G+ +++ +G  ++ MY KC  +     VF  +  ++
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SWT +IAG+AQ+    +A   F  +   G++ + +   S+L ACS    + + ++I  
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQD 437

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           +II  G  SD  +  A++ +Y KCG++  +  VFE I  ++VV+W +MI++YV +   + 
Sbjct: 438 HIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDN 497

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL  F  + +  ++ +S T  S L+   S   L+ GK ++  I++ G   +  V+++LV 
Sbjct: 498 ALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVS 557

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           M+  CG L  A  +FN +  +DL+ W ++I     HG+ +VA D F  M+     PD IT
Sbjct: 558 MFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKIT 617

Query: 566 FLALLYACSHSGLINEGKKF 585
           F  LL AC+    + EG++ 
Sbjct: 618 FTGLLNACASPEALTEGRRL 637



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 87/172 (50%), Gaps = 2/172 (1%)

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  I  KD     ++++     G  NEA+++   ++ ++++    T  + L        
Sbjct: 68  VFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L  G+ +   I + G   +  + ++L++MYA+CG    A ++F+ ++ KD+  W  ++  
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
              HG  + A  L  +M  +S  PD  TF+++L AC+ +  +++G++   ++
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLI 237


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/836 (37%), Positives = 520/836 (62%), Gaps = 4/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG+ + A+Q+FD + ++ V++WN +LG YV +G      + + +M    +  D  T
Sbjct: 154 MYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRT 213

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ ACA  +++D G +++ L+LK G+D+  F+  +L+ M+ KC D   A ++FD + 
Sbjct: 214 FVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLP 273

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+V W S+I+  +  G+  +A  LF+ M+  G+  +   FV+ L+AC        G 
Sbjct: 274 TR-DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGK 332

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA   + G + ++YV  A+++MY +CG M +A  V   ++ ++ VSW +M+ GF Q+ 
Sbjct: 333 KVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHG 392

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A  FF ++  +G +P++V  ++ + A      L  G+++  + I+ G+ SD ++  
Sbjct: 393 RIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRT 452

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYAKC  +    RVF +++ Q+ ++W  +I  Y Q+  +  AL  F+ +  EG+  
Sbjct: 453 ALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP 512

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           +     S+L  C     +   K +H  I++ GL SDL + NA+V ++  CG++  ++N+F
Sbjct: 513 NSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLF 572

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  +D+VSW ++I+ +V +G    A + F +M E+ ++ D IT    L+A +S   L 
Sbjct: 573 NDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALT 632

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +G+ L+  I    F+ +  V + L+ MY +CG+++ A++VF+ +  K++  WTSMI    
Sbjct: 633 EGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYA 692

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HGRGK A++LFY+M+ E   PD ITF+  L AC+H+GLI EG    + M+ ++ ++P  
Sbjct: 693 QHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRM 751

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C+VDL GRA  L EA +F+  MQ+EP + VW ALLGAC+VH N EL E  A+K LE
Sbjct: 752 EHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLE 811

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LDP + G +V++SN++AA+  WK+V ++R  M   G+ K PG SWIE+  K+H+F + DK
Sbjct: 812 LDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDK 871

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           +H +++EI+ +L  +  ++ R+ GYV  T++VLH+VE+ EK Q L+ HSERLAI YG+LK
Sbjct: 872 THPQTEEIHAELERLHMEM-RQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLK 930

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +   + I I+KNLRVC DCH+  K +S++  R+++ RD+NRFHHF+ GVCSCGD+W
Sbjct: 931 TPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 181/626 (28%), Positives = 321/626 (51%), Gaps = 18/626 (2%)

Query: 27  NAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLK 86
           NA+L      G+    ++   R+    I +   T+  +++ C   K+L  G +I+  + K
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138

Query: 87  CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALG 146
            G     F+ N+L+ MYAKC +   A+Q+FD M EK DV  WN ++  Y   G   EA  
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREK-DVYSWNLLLGGYVQHGLYEEAFK 197

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           L  +M +  +  +  TFV+ L AC D+     G E++   +K+G +  ++V  ALI M+ 
Sbjct: 198 LHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHI 257

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +CG + +A  V   L  +D V+W SM+TG  ++  + +A   F+ ++  G +PD+V  V+
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            + A      L  GK++HA   + G+ +++ +G  ++ MY KC  +     VF  +  ++
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SWT +IAG+AQ+    +A   F  +   G++ + +   S+L ACS    + + ++I  
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQD 437

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           +II  G  SD  +  A++ +Y KCG++  +  VFE I  ++VV+W +MI++YV +   + 
Sbjct: 438 HIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDN 497

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL  F  + +  ++ +S T  S L+   S   L+ GK ++  I++ G   +  V+++LV 
Sbjct: 498 ALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVS 557

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           M+  CG L  A  +FN +  +DL+ W ++I     HG+ +VA D F  M+     PD IT
Sbjct: 558 MFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKIT 617

Query: 566 FLALLYACSHSGLINEGKKFLEIMR-----CDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
           F  LL AC+    + EG++   ++      CD  +         L+ +  +   +E+A+Q
Sbjct: 618 FTGLLNACASPEALTEGRRLHALITEAAFDCDVLVG------TGLISMYTKCGSIEDAHQ 671

Query: 621 FVRSMQIEPTAEV--WCALLGACRVH 644
               +   P   V  W +++     H
Sbjct: 672 VFHKL---PKKNVYSWTSMIAGYAQH 694



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 87/172 (50%), Gaps = 2/172 (1%)

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  I  KD     ++++     G  NEA+++   ++ ++++    T  + L        
Sbjct: 68  VFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L  G+ +   I + G   +  + ++L++MYA+CG    A ++F+ ++ KD+  W  ++  
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
              HG  + A  L  +M  +S  PD  TF+++L AC+ +  +++G++   ++
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLI 237


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  653 bits (1684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/836 (39%), Positives = 494/836 (59%), Gaps = 3/836 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            M+ +CG V  A+Q  +  + R V  +NA++ A   +G      E Y +MR  G+ ++  T
Sbjct: 328  MFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTT 387

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            +  V+ AC+  K L  G  IH  + + G+ S   I NSL++MYA+C D  +AR+LF+ M 
Sbjct: 388  YLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTM- 446

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             K D++ WN+II+ Y+      EA+ L+++MQ  G+     TF+  L AC +SS  + G 
Sbjct: 447  PKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGK 506

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             IH   ++SG     ++ANAL+ MY RCG + EA  V      +D +SWNSM+ G  Q+ 
Sbjct: 507  MIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHG 566

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             Y  A + F E++  G +PD++   + +        L  G+++H   I+ G   D+ +GN
Sbjct: 567  SYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGN 626

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L++MY +C  +     VF+ +  ++ +SWT +I G+A      KA ELF  +Q +G   
Sbjct: 627  ALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKP 686

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
                  S+L AC    C+ + K++  +I+  G   D  + NA++  Y K G++  +R VF
Sbjct: 687  VKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVF 746

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            + + ++D++SW  MI+ Y  NGL   AL+  Y M E  V  +  + VS L+A SS S L+
Sbjct: 747  DKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALE 806

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            +GK ++  I+++    +  V ++L+ MYA+CG+L+ A +VF+    K+++ W +MINA  
Sbjct: 807  EGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYA 866

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             HG    A+D F  M+ E   PD  TF ++L AC+HSGL+ EG +    +   + L P  
Sbjct: 867  QHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTI 926

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            EHY CLV LLGRA   +EA   +  M   P A VW  LLGACR+H N  L E  A   L+
Sbjct: 927  EHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALK 986

Query: 660  LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            L+  NP  YVL+SNV+AA+ +W DV ++R  M G G++K PG SWIE+ N IH FIA D+
Sbjct: 987  LNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADR 1046

Query: 720  SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            SH E+ EIY++L  ++ ++ER  GY   TQ+VLHN+++E +   L  HSERLAIAYG+LK
Sbjct: 1047 SHPETAEIYEELKRLSLEMER-AGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLK 1105

Query: 780  STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +  G+ IRI KNLR+C DCH+  K +S+L GRE++ RD+NRFH F+ G CSC D+W
Sbjct: 1106 TPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161



 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 194/601 (32%), Positives = 329/601 (54%), Gaps = 9/601 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC SV DA Q+F K+ +R V +WN+++  Y   G   +  + +  M+  G      T
Sbjct: 126 MYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKIT 185

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++ AC    +L+ G KIH  +++ GY     + NSL+ MY KC D   ARQ+F  + 
Sbjct: 186 YISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGI- 244

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV +N+++  Y+      E +GLF +M   G+  +  T++  L A    S    G 
Sbjct: 245 YRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGK 304

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   V  G N  + V  AL  M+ RCG +  A   L    ++D V +N+++    Q+ 
Sbjct: 305 RIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHG 364

Query: 241 LYCKAMQFFRELQGAG---QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            Y +A + + +++  G    +   +  +NA S S  LG    G+ +H++  + G  SD+Q
Sbjct: 365 HYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGA---GELIHSHISEVGHSSDVQ 421

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           IGN+L+ MYA+C  +     +F  M  +D ISW  IIAGYA+     +A++L++ +Q EG
Sbjct: 422 IGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEG 481

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +    +    +L AC+     S  K IH  I+R G+ S+  + NA++++Y +CG+I  ++
Sbjct: 482 VKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQ 541

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           NVFE   ++D++SW SMI+ +  +G    A +LF  M +  +E D IT  S L    +  
Sbjct: 542 NVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPE 601

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L+ G++++  II  G  L+ ++ ++L++MY RCG+L  A +VF+ ++ ++++ WT+MI 
Sbjct: 602 ALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIG 661

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQL 595
                G  + A +LF++M+ + F P   TF ++L AC  S  ++EGKK +  I+   Y+L
Sbjct: 662 GFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYEL 721

Query: 596 D 596
           D
Sbjct: 722 D 722



 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 168/579 (29%), Positives = 298/579 (51%), Gaps = 6/579 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++ C   + L    +IH  +++ G     F+ N L+ MY KC     A Q+F +M  + 
Sbjct: 88  LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKM-PRR 146

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           DV+ WNS+IS Y+  G   +A  LF EMQ  G + +  T+++ L AC   +    G +IH
Sbjct: 147 DVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIH 206

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           +  +++G      V N+L+ MY +C  +  A  V   +  +D VS+N+ML  + Q     
Sbjct: 207 SKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVE 266

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           + +  F ++   G  PD+V  +N + A      L  GK +H  A+ +G  SD+++G  L 
Sbjct: 267 ECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALA 326

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
            M+ +C  V    +       +D + +  +IA  AQ+  + +A E +  ++ +G+  +  
Sbjct: 327 TMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRT 386

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
              SVL ACS  K +   + IH +I   G  SD+ I N+++ +Y +CG++  +R +F ++
Sbjct: 387 TYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTM 446

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             +D++SW ++I+ Y       EA++L+  M    V+   +T +  LSA ++ S    GK
Sbjct: 447 PKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGK 506

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
            ++  I+R G    G +A++L++MY RCG++  A  VF   + +D+I W SMI  +  HG
Sbjct: 507 MIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHG 566

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEH 601
             + A  LF +M+ E   PD ITF ++L  C +   +  G++  + I+    QLD     
Sbjct: 567 SYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLD--VNL 624

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
              L+++  R   L++AY+   S++       W A++G 
Sbjct: 625 GNALINMYIRCGSLQDAYEVFHSLR-HRNVMSWTAMIGG 662



 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 233/435 (53%), Gaps = 2/435 (0%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           TN   +V  +Q C           IHA  V++G    ++++N LI MY +C  +++A  V
Sbjct: 80  TNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQV 139

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++  +D +SWNS+++ + Q     KA Q F E+Q AG  P ++  ++ ++A      L
Sbjct: 140 FLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAEL 199

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             GK++H+  I+ G+  D ++ N+L++MY KC  +    +VF  +  +D +S+ T++  Y
Sbjct: 200 EYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLY 259

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
           AQ     + + LF  +  EG+  D +   ++L A +    + + K IH   + +GL SD+
Sbjct: 260 AQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDI 319

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            +  A+  ++ +CG++  ++   E+   +DVV + ++I++   +G   EA E +Y M   
Sbjct: 320 RVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSD 379

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            V  +  T +S L+A S+   L  G+ ++  I   G + +  + +SL+ MYARCG L  A
Sbjct: 380 GVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRA 439

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            ++FN +  +DLI W ++I           A+ L+ +M++E   P  +TFL LL AC++S
Sbjct: 440 RELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNS 499

Query: 577 GLINEGKKFLE-IMR 590
              ++GK   E I+R
Sbjct: 500 SAYSDGKMIHEDILR 514



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 5/183 (2%)

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
           H G   E L   Y       E++    V  +   +    L + K ++  ++  G   +  
Sbjct: 61  HRGSEREDLSNAY--QPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIF 118

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           +++ L++MY +C ++  A++VF  +  +D+I W S+I+     G  K A  LF +M+   
Sbjct: 119 LSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAG 178

Query: 559 FAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
           F P  IT++++L AC     +  GKK   +I+   YQ DP  ++   L+++ G+   L  
Sbjct: 179 FIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPS 236

Query: 618 AYQ 620
           A Q
Sbjct: 237 ARQ 239


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/833 (39%), Positives = 490/833 (58%), Gaps = 3/833 (0%)

Query: 4    KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
            +CG V  A+Q F   + R V  +NA++ A   +G  +   E Y RMR  G++++  T+  
Sbjct: 276  RCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335

Query: 64   VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
            ++ AC+  K L+ G  IH  + + G+ S   I N+L++MYA+C D  KAR+LF  M  K 
Sbjct: 336  ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTM-PKR 394

Query: 124  DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            D++ WN+II+ Y+      EA+ L+++MQ  G+     TF+  L AC +SS    G  IH
Sbjct: 395  DLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIH 454

Query: 184  AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
               ++SG     ++ANAL+ MY RCG + EA  V    + +D +SWNSM+ G  Q+  Y 
Sbjct: 455  EDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYE 514

Query: 244  KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
             A + F+E+Q    +PD +   + +S       L  GK++H    + G   D+ +GN L+
Sbjct: 515  TAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALI 574

Query: 304  DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
            +MY +C  +     VF+ +  +D +SWT +I G A     +KA+ELF  +Q EG      
Sbjct: 575  NMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKS 634

Query: 364  IIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESI 422
               S+L  C+   C+ + K++  YI+  G   D  + NA++  Y K G++  +R VF+ +
Sbjct: 635  TFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKM 694

Query: 423  ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             S+D+VSW  +I+ Y  NGL   A+E  Y M E +V  +  + VS L+A SS S L++GK
Sbjct: 695  PSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGK 754

Query: 483  ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
             ++  I+++    +  V ++L+ MYA+CG+   A +VF+ +  K+++ W +MINA   HG
Sbjct: 755  RVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHG 814

Query: 543  RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
                A+  F  ME E   PD  TF ++L AC+H+GL+ EG +    M  +Y + P  EHY
Sbjct: 815  LASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHY 874

Query: 603  ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
             CLV LLGRA   +EA   +  M   P A VW  LLGACR+H N  L E  A   L+L+ 
Sbjct: 875  GCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNA 934

Query: 663  GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
             NP  Y+L+SNV+AA+ +W DV ++R  M G G++K PG SWIE+ N IH FIA D+SH 
Sbjct: 935  RNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHP 994

Query: 723  ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE 782
            E+ EIY +L  ++ ++E E GY   TQ VLH++ +  +   L  HSERLAIAYG++K+  
Sbjct: 995  ETAEIYAELKRLSVEME-EAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPP 1053

Query: 783  GSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            G+ IRI KNLR+C DCH+  K +S+L GRE++ RD+NRFH F+ G CSC DYW
Sbjct: 1054 GTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106



 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 220/746 (29%), Positives = 390/746 (52%), Gaps = 32/746 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC SVLDA Q+F ++ +R V +WN+++  Y   G   +  + +  M+  G   +  T
Sbjct: 71  MYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKIT 130

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++ AC    +L+ G KIH  ++K GY     + NSL++MY KC D  +ARQ+F  + 
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS 190

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV +N+++  Y+      E LGLF +M   G+  +  T++  L A    S    G 
Sbjct: 191 PR-DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGK 249

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH  TV+ G N  + V  AL+ M  RCG +  A        ++D V +N+++    Q+ 
Sbjct: 250 RIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHG 309

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A + +  ++  G   ++   ++ ++A      L  GK +H++  + G  SD+QIGN
Sbjct: 310 HNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGN 369

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYA+C  +     +FY M  +D ISW  IIAGYA+     +A+ L++ +Q EG+  
Sbjct: 370 ALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKP 429

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
             +    +L AC+     +  K IH  I+R G+ S+  + NA++++Y +CG++  ++NVF
Sbjct: 430 GRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVF 489

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E  +++DV+SW SMI+ +  +G    A +LF  M    +E D+IT  S LS   +   L+
Sbjct: 490 EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALE 549

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GK+++G I   G  L+ ++ ++L++MY RCG+L  A  VF+ +Q +D++ WT+MI    
Sbjct: 550 LGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA 609

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPW 598
             G    AI+LF++M+ E F P   TF ++L  C+ S  ++EGKK +  I+   Y+LD  
Sbjct: 610 DQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTG 669

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV--WCALLGACRVHSNKELGEIVAKK 656
             +   L+    ++  + +A +    M   P+ ++  W  ++     ++   LG+   + 
Sbjct: 670 VGN--ALISAYSKSGSMTDAREVFDKM---PSRDIVSWNKIIAG---YAQNGLGQTAVEF 721

Query: 657 LLELDPGN--PGNYVLIS-----NVFAASRKWKDV--EQVRMRMRGSGLKKTPGSSWIEI 707
             ++   +  P  +  +S     + F+A  + K V  E V+ +++G           + +
Sbjct: 722 AYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGD----------VRV 771

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAE 733
           G  + S  A+  S  E+ E++  + E
Sbjct: 772 GAALISMYAKCGSQGEAQEVFDNIIE 797



 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 176/584 (30%), Positives = 300/584 (51%), Gaps = 6/584 (1%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+  +++ C   + L    +IH  +++       F+ N L+ MY KC     A Q+F  M
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + DV+ WNS+IS Y+  G   +A  LF EMQ  G + N  T+++ L AC   +    G
Sbjct: 89  -PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH+  +K+G      V N+L++MY +CG +  A  V   +  +D VS+N+ML  + Q 
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               + +  F ++   G  PD+V  +N + A      L  GK +H   +++G  SD+++G
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+ M  +C  V+   + F     +D + +  +IA  AQ+  +++A E +  ++ +G+ 
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA 327

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNV 418
            +     S+L ACS  K +   K IH +I   G  SD+ I NA++ +Y +CG++  +R +
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F ++  +D++SW ++I+ Y       EA+ L+  M    V+   +T +  LSA ++ S  
Sbjct: 388 FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             GK ++  I+R G    G +A++L++MY RCG+L  A  VF   Q +D+I W SMI  +
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDP 597
             HG  + A  LF +M+ E   PD+ITF ++L  C +   +  GK+    I     QLD 
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD- 566

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
                  L+++  R   L++A     S+Q       W A++G C
Sbjct: 567 -VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMS-WTAMIGGC 608



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 160/582 (27%), Positives = 293/582 (50%), Gaps = 21/582 (3%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           T   T+VA LQ C           IHA  V++     ++++N LI MY +C  + +A  V
Sbjct: 25  TERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQV 84

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++  +D +SWNS+++ + Q     KA Q F E+Q AG  P+++  ++ ++A      L
Sbjct: 85  FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
            NGK++H+  IK G+  D ++ N+L+ MY KC  +    +VF  ++ +D +S+ T++  Y
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
           AQ     + L LF  +  EG+  D +   ++L A +    + + K IH   + +GL SD+
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI 264

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            +  A+V +  +CG++D ++  F+    +DVV + ++I++   +G   EA E +Y M   
Sbjct: 265 RVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSD 324

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            V  +  T +S L+A S+   L+ GK ++  I   G + +  + ++L+ MYARCG L  A
Sbjct: 325 GVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKA 384

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            ++F  +  +DLI W ++I           A+ L+ +M++E   P  +TFL LL AC++S
Sbjct: 385 RELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS 444

Query: 577 GLINEGKKFLE-IMRCDYQLDPWPEHYA-CLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
               +GK   E I+R   + +    H A  L+++  R   L EA       Q       W
Sbjct: 445 SAYADGKMIHEDILRSGIKSN---GHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS-W 500

Query: 635 CALLGACRVHSNKELGEIVAKKLL--ELDPGNPGNYVLISNVFAASRKWKDVE---QVRM 689
            +++     H + E    + +++   EL+P N    +  ++V +  +  + +E   Q+  
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDN----ITFASVLSGCKNPEALELGKQIHG 556

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           R+  SGL+       + +GN + +   R  S  ++  ++  L
Sbjct: 557 RITESGLQLD-----VNLGNALINMYIRCGSLQDARNVFHSL 593



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 123/234 (52%), Gaps = 3/234 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K GS+ DA ++FDK+  R + +WN ++  Y  NG     +E   +M+   +  + F+F
Sbjct: 678 YSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSF 737

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ AC+    L+ G ++H  ++K        +  +L++MYAKC    +A+++FD + E
Sbjct: 738 VSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIE 797

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K +VV WN++I+AY+  G   +ALG F  M++ G+  +  TF + L AC  +     G +
Sbjct: 798 K-NVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQ 856

Query: 182 IHAA-TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           I ++   + G    +     L+ +  R  +  EA  ++ Q+    D+  W ++L
Sbjct: 857 IFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLL 910



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 3/164 (1%)

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
            E++  T V+ L   +   +L + K ++  ++      +  +++ L++MY +C ++  A+
Sbjct: 23  TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           +VF  +  +D+I W S+I+     G  K A  LF +M+   F P+ IT++++L AC    
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142

Query: 578 LINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
            +  GKK   +I++  YQ DP  ++   L+ + G+   L  A Q
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQ 184



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 11/140 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS  +A+++FD + ++ V TWNAM+ AY  +G   + L  ++ M   GI  D  T
Sbjct: 778 MYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGST 837

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS------LVAMYAKCYDFRKARQ 114
           F  ++ AC        G  + G  +    +S   ++ +      LV +  +   F++A  
Sbjct: 838 FTSILSACN-----HAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAET 892

Query: 115 LFDRMGEKEDVVLWNSIISA 134
           L ++M    D  +W +++ A
Sbjct: 893 LINQMPFPPDAAVWETLLGA 912


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/836 (37%), Positives = 523/836 (62%), Gaps = 3/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC +   A +L D+ S+  + +W+A++  Y  NG     L  +  M +LG+  + FT
Sbjct: 100 LYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFT 159

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+KAC+++KDL  G ++HG+V+  G++   F+ N+LV MYAKC +F  +++LFD + 
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +VV WN++ S Y     C EA+GLF EM   G+  N ++  + + AC      + G 
Sbjct: 220 ER-NVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGK 278

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +K G +   + ANAL+ MYA+ G + +A  V  +++  D VSWN+++ G V ++
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHE 338

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +A++   +++ +G  P+     +A+ A   +G    G++LH+  +K    SDL +  
Sbjct: 339 HHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSV 398

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  +      F  +  +D I+W  II+GY+Q    ++AL LF  +  EG+  
Sbjct: 399 GLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGF 458

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           +   + ++L + +GL+ +   +++HG  ++ G  SD+ ++N+++D YGKC +++ +  +F
Sbjct: 459 NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIF 518

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E     D+VS+TSMI++Y   G   EAL+LF  M +  ++ D     S L+A ++LS  +
Sbjct: 519 EECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFE 578

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GK+L+  I++ GF L+    +SLV+MYA+CG++D A + F+ +  + ++ W++MI    
Sbjct: 579 QGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLA 638

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG G+ A+ LF +M  E  +P+HIT +++L AC+H+GL+ E K + E M   +   P  
Sbjct: 639 QHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQ 698

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC++DLLGRA  + EA + V  M  E  A VW ALLGA R+H + ELG   A+ L  
Sbjct: 699 EHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFI 758

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P   G +VL++N++A++ KW++V +VR  MR S +KK PG SWIE+ +K+++F+  D+
Sbjct: 759 LEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDR 818

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH  S EIY KL E+++ +++  GYV   +  LH+VE+ EK  +LY HSE+LA+A+G++ 
Sbjct: 819 SHYRSQEIYAKLDELSDLMDK-AGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIA 877

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +G+ IR+ KNLRVCVDCH+  K + ++  RE++VRD NRFHHF+ G CSCGDYW
Sbjct: 878 TPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933



 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 178/622 (28%), Positives = 327/622 (52%), Gaps = 8/622 (1%)

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           + ++  ++  C   K L  G +IH  + K G      I N L+ +Y+KC +F  AR+L D
Sbjct: 56  SVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVD 115

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
              E  D+V W+++IS Y+ +G    AL  F EM  +G+  N +TF + L+AC       
Sbjct: 116 ESSEP-DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLR 174

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           +G ++H   V SG    V+VAN L+ MYA+C +  ++  +  ++  ++ VSWN++ + +V
Sbjct: 175 IGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYV 234

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q D   +A+  F E+  +G KP++    + V+A   L +   GK +H Y IK G+  D  
Sbjct: 235 QIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF 294

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
             N L+DMYAK   +     VF ++   D +SW  +IAG   +  H +ALEL   ++  G
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSG 354

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +  ++  + S L AC+G+      +++H  +++  + SDL +   +VD+Y KC  ++ +R
Sbjct: 355 ICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 414

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
             F  +  KD+++W ++IS Y       EAL LF  M++  +  +  TL + L + + L 
Sbjct: 415 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 474

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           ++   ++++G  ++ GF+ +  V +SL+D Y +C  ++ A ++F      DL+ +TSMI 
Sbjct: 475 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMIT 534

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQL 595
           A   +G+G+ A+ LF +M+     PD     +LL AC++     +GK+  + I++  + L
Sbjct: 535 AYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL 594

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           D +  +   LV++  +   +++A +    +  E     W A++G    H +      +  
Sbjct: 595 DIFAGN--SLVNMYAKCGSIDDAGRAFSEL-TERGIVSWSAMIGGLAQHGHGRQALQLFN 651

Query: 656 KLLELDPGNPGNYVLISNVFAA 677
           ++L+   G   N++ + +V  A
Sbjct: 652 QMLK--EGVSPNHITLVSVLGA 671



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 171/354 (48%), Gaps = 32/354 (9%)

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L  C   K +    +IH +I + GLSD   I N ++++Y KC N  Y+R + +     D
Sbjct: 62  LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPD 121

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
           +VSW+++IS Y  NGL   AL  F+ M+   V+ +  T  S L A S +  L+ GK+++G
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181

Query: 487 FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
            ++  GF  +  VA++LV MYA+C     + ++F+ +  ++++ W ++ +          
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGE 241

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK-KFLE--IMRCDYQLDPWPEHYA 603
           A+ LFY+M      P+  +  +++ AC  +GL +  + K +   +++  Y  DP+  +  
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWDPFSAN-- 297

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
            LVD+  +   L +A      ++ +P    W A++  C +H + E       + LEL  G
Sbjct: 298 ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHE-------QALEL-LG 348

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
                 +  N+F  S               S LK   G    E+G ++HS + +
Sbjct: 349 QMKRSGICPNIFTLS---------------SALKACAGMGLKELGRQLHSSLMK 387



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 64/123 (52%)

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           L+++ N    S++    LS   +   L+ G +++  I + G + + S+ + L+++Y++C 
Sbjct: 46  LIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCR 105

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
               A K+ +     DL+ W+++I+    +G G  A+  F++M       +  TF ++L 
Sbjct: 106 NFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLK 165

Query: 572 ACS 574
           ACS
Sbjct: 166 ACS 168


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/836 (37%), Positives = 508/836 (60%), Gaps = 4/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG+   A+Q+FD++  + V++WN +LG YV +         + +M   G+  D +T
Sbjct: 148 MYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYT 207

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ ACA  K++D G ++  L+L  G+D+  F+  +L+ M+ KC     A ++F+ + 
Sbjct: 208 FVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNL- 266

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D++ W S+I+  +   Q  +A  LF+ M+  G+  +   FV+ L+AC        G 
Sbjct: 267 PRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGK 326

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA   + G + ++YV  AL++MY +CG M +A  V   ++ ++ VSW +M+ GF Q+ 
Sbjct: 327 RVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHG 386

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A  FF ++  +G +P++V  ++ + A  R   L  G+++H   IK G+++D ++  
Sbjct: 387 RMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRT 446

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYAKC  +     VF +++ Q+ ++W  +I  Y Q+  +  A+  F+ +  EG+  
Sbjct: 447 ALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKP 506

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     S+L  C     +   K +   IIR G  SDL I NA+V ++  CG++  + N+F
Sbjct: 507 DSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLF 566

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  +D+VSW ++I+ +V +G    A + F +M E+ V+ D IT    L+A +S   L 
Sbjct: 567 NDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALT 626

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +G+ L+  I     + +  V + L+ MY +CG++D A+ VF+ +  K++  WTSMI    
Sbjct: 627 EGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYA 686

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HGRGK A++LF +M+ E   PD ITF+  L AC+H+GLI EG    E M+ D+ ++P  
Sbjct: 687 QHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMK-DFNIEPRM 745

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C+VDL GRA  L EA +F+  MQ++P + +W ALLGAC+VH + EL E VA+K LE
Sbjct: 746 EHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLE 805

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LDP + G YV++SN++AA+  WK+V ++R  M   G+ K PG SWIE+  ++H F + DK
Sbjct: 806 LDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDK 865

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           +H + +EI+ +L  +  ++++  GYV  T++VLH+VE+ EK   L  HSERLAIAYG+LK
Sbjct: 866 THPQIEEIHAELGRLHMEMKKL-GYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLK 924

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +   + I I+KNLRVC DCH+  KL+S++  R+++ RD+NRFHHF+ GVCSCGD+W
Sbjct: 925 TPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  305 bits (781), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 168/533 (31%), Positives = 285/533 (53%), Gaps = 2/533 (0%)

Query: 54  ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           I +   T+  +++ C   K+L  G +IH  +         F+ N L++MYAKC +   A+
Sbjct: 100 IQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAK 159

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           Q+FD M +K DV  WN ++  Y    +  EA  L  +M + G+  + YTFV  L AC D+
Sbjct: 160 QIFDEMPDK-DVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADA 218

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                G E+ +  + +G +  ++V  ALI M+ +CG + +A  V   L  +D ++W SM+
Sbjct: 219 KNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMI 278

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           TG  ++  + +A   F+ ++  G +PD+V  V+ + A      L  GK +HA   + G  
Sbjct: 279 TGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLD 338

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           +++ +G  L+ MY KC  +     VF  +  ++ +SWT +IAG+AQ+    +A   F  +
Sbjct: 339 TEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKM 398

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNI 412
              G++ + +   S+L ACS    + Q ++IH  II+ G ++D  +  A++ +Y KCG++
Sbjct: 399 IESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSL 458

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             +RNVFE I  ++VV+W +MI++YV +   + A+  F  + +  ++ DS T  S L+  
Sbjct: 459 MDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVC 518

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
            S   L+ GK +   IIR GF  +  + ++LV M+  CG L  A  +FN +  +DL+ W 
Sbjct: 519 KSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWN 578

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           ++I     HG  + A D F  M+     PD ITF  LL AC+    + EG++ 
Sbjct: 579 TIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRL 631



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 246/456 (53%), Gaps = 1/456 (0%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           N+ ++  S +GQ  EA+ +   +    +  +  T+ + LQ C        G  IH     
Sbjct: 73  NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
           S     +++ N LI+MYA+CG    A  +  ++ +KD  SWN +L G+VQ+  Y +A + 
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
             ++   G KPD+   V  ++A     N+  G EL +  +  G+ +DL +G  L++M+ K
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  V+   +VF  +  +D I+WT++I G A++    +A  LF+ ++ EG+  D +   S+
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           L AC+  + + Q K +H  +   GL +++ +  A++ +Y KCG+++ +  VF  ++ ++V
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNV 372

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           VSWT+MI+ +  +G   EA   F  M E+ +E + +T +S L A S  S LK+G++++  
Sbjct: 373 VSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDR 432

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
           II+ G+  +  V ++L+ MYA+CG+L  A  VF  +  ++++ W +MI A   H +   A
Sbjct: 433 IIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNA 492

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           +  F  +  E   PD  TF ++L  C     +  GK
Sbjct: 493 VATFQALLKEGIKPDSSTFTSILNVCKSPDALELGK 528



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 159/323 (49%), Gaps = 5/323 (1%)

Query: 367 SVLMACSGLKCMSQTKEIHGYI-IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           S+L  C   K +   + IH +I   K   D+ + N ++ +Y KCGN + ++ +F+ +  K
Sbjct: 109 SLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDK 168

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           DV SW  ++  YV +    EA  L   M +  V+ D  T V  L+A +    + KG EL 
Sbjct: 169 DVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELF 228

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
             I+  G++ +  V ++L++M+ +CG +D A KVFN +  +DLI WTSMI     H + K
Sbjct: 229 SLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFK 288

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A +LF  ME E   PD + F++LL AC+H   + +GK+    M+ +  LD        L
Sbjct: 289 QACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMK-EVGLDTEIYVGTAL 347

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           + +  +   +E+A +    ++       W A++     H   E   +   K++E   G  
Sbjct: 348 LSMYTKCGSMEDALEVFNLVKGRNVVS-WTAMIAGFAQHGRMEEAFLFFNKMIE--SGIE 404

Query: 666 GNYVLISNVFAASRKWKDVEQVR 688
            N V   ++  A  +   ++Q R
Sbjct: 405 PNRVTFMSILGACSRPSALKQGR 427


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  632 bits (1631), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 319/837 (38%), Positives = 492/837 (58%), Gaps = 4/837 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC SVLDA Q+F ++ +R V +WN+++  Y   G   +  + +  M+  G   +  T
Sbjct: 71  MYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKIT 130

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++ AC    +L+ G KIH  ++K GY     + NSL++MY KC D  +ARQ+F  + 
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS 190

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV +N+++  Y+      E LGLF +M   G+  +  T++  L A    S    G 
Sbjct: 191 PR-DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGK 249

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH  TV+ G N  + V  AL+ M  RCG +  A      + ++D V +N+++    Q+ 
Sbjct: 250 RIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHG 309

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A + +  ++  G   ++   ++ ++A      L  GK +H++  + G  SD+QIGN
Sbjct: 310 HNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGN 369

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYA+C  +     +FY M  +D ISW  IIAGYA+     +A+ L++ +Q EG+  
Sbjct: 370 ALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKP 429

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
             +    +L AC+     +  K IH  I+R G+ S+  + NA++++Y +CG++  ++NVF
Sbjct: 430 GRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVF 489

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E  +++DV+SW SMI+ +  +G    A +LF  M    +E D+IT  S LS   +   L+
Sbjct: 490 EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALE 549

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GK+++G I   G  L+ ++ ++L++MY RCG+L  A  VF+ +Q +D++ WT+MI    
Sbjct: 550 LGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA 609

Query: 540 LHGRGKVAIDLFYKMEAESF-APDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             G    AI+LF++M+ E F  PD  TF ++L AC+H+GL+ EG +    M  +Y + P 
Sbjct: 610 DQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPT 669

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY CLV LLGRA   +EA   +  M   P A VW  LLGACR+H N  L E  A   L
Sbjct: 670 IEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNAL 729

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           +L+  NP  Y+L+SNV+AA+ +W DV ++R  M G G++K PG SWIE+ N IH FIA D
Sbjct: 730 KLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAAD 789

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           +SH E+ EIY +L  ++ ++E E GY   TQ VLH++ +  +   L  HSERLAIAYG++
Sbjct: 790 RSHPETAEIYAELKRLSVEME-EAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLI 848

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           K+  G+ IRI KNLR+C DCH+  K +S+L GRE++ RD+NRFH F+ G CSC DYW
Sbjct: 849 KTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905



 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 184/610 (30%), Positives = 309/610 (50%), Gaps = 17/610 (2%)

Query: 34  VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD 93
           VSN    R  ET           D  T+  +++ C   + L    +IH  +++ G     
Sbjct: 14  VSNTHQPRPTET-----------DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDI 62

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F+ N L+ MY KC     A Q+F  M  + DV+ WNS+IS Y+  G   +A  LF EMQ 
Sbjct: 63  FLSNLLINMYVKCRSVLDAHQVFKEM-PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQN 121

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G + N  T+++ L AC   +    G +IH+  +K+G      V N+L++MY +CG +  
Sbjct: 122 AGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPR 181

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V   +  +D VS+N+ML  + Q     + +  F ++   G  PD+V  +N + A   
Sbjct: 182 ARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTT 241

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
              L  GK +H   +++G  SD+++G  L+ M  +C  V+   + F  +  +D + +  +
Sbjct: 242 PSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNAL 301

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG- 392
           IA  AQ+  +++A E +  ++ +G+  +     S+L ACS  K +   K IH +I   G 
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
            SD+ I NA++ +Y +CG++  +R +F ++  +D++SW ++I+ Y       EA+ L+  
Sbjct: 362 SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQ 421

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M    V+   +T +  LSA ++ S    GK ++  I+R G    G +A++L++MY RCG+
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGS 481

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           L  A  VF   Q +D+I W SMI  +  HG  + A  LF +M+ E   PD+ITF ++L  
Sbjct: 482 LMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSG 541

Query: 573 CSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           C +   +  GK+    I     QLD        L+++  R   L++A     S+Q     
Sbjct: 542 CKNPEALELGKQIHGRITESGLQLD--VNLGNALINMYIRCGSLQDARNVFHSLQHRDVM 599

Query: 632 EVWCALLGAC 641
             W A++G C
Sbjct: 600 S-WTAMIGGC 608



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 162/582 (27%), Positives = 296/582 (50%), Gaps = 21/582 (3%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           T+  T+VA LQ C           IHA  V++G    ++++N LI MY +C  + +A  V
Sbjct: 25  TDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQV 84

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++  +D +SWNS+++ + Q     KA Q F E+Q AG  P+++  ++ ++A      L
Sbjct: 85  FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
            NGK++H+  IK G+  D ++ N+L+ MY KC  +    +VF  ++ +D +S+ T++  Y
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
           AQ     + L LF  +  EG+  D +   ++L A +    + + K IH   + +GL SD+
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI 264

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            +  A+V +  +CG++D ++  F+ I  +DVV + ++I++   +G   EA E +Y M   
Sbjct: 265 RVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSD 324

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            V  +  T +S L+A S+   L+ GK ++  I   G + +  + ++L+ MYARCG L  A
Sbjct: 325 GVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKA 384

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            ++F  +  +DLI W ++I           A+ L+ +M++E   P  +TFL LL AC++S
Sbjct: 385 RELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS 444

Query: 577 GLINEGKKFLE-IMRCDYQLDPWPEHYA-CLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
               +GK   E I+R   + +    H A  L+++  R   L EA       Q       W
Sbjct: 445 SAYADGKMIHEDILRSGIKSN---GHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS-W 500

Query: 635 CALLGACRVHSNKELGEIVAKKLL--ELDPGNPGNYVLISNVFAASRKWKDVE---QVRM 689
            +++     H + E    + +++   EL+P N    +  ++V +  +  + +E   Q+  
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDN----ITFASVLSGCKNPEALELGKQIHG 556

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           R+  SGL+       + +GN + +   R  S  ++  ++  L
Sbjct: 557 RITESGLQLD-----VNLGNALINMYIRCGSLQDARNVFHSL 593


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 311/836 (37%), Positives = 511/836 (61%), Gaps = 30/836 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC     A +L D+ S+  + +W+A++  Y  NG     L  +  M +LG+  + FT
Sbjct: 100 LYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFT 159

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+KAC+++KDL  G ++HG+V+  G++   F+ N+LV MYAKC +F  +++LFD + 
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +VV WN++ S Y     C EA+GLF EM   G+  N ++  + + AC      + G 
Sbjct: 220 ER-NVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGK 278

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +K G +   + ANAL+ MYA+ G + +A  V  +++  D VSWN+++ G V ++
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHE 338

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +A++   +++                           ++LH+  +K    SDL +  
Sbjct: 339 HHEQALELLGQMK---------------------------RQLHSSLMKMDMESDLFVSV 371

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  +      F  +  +D I+W  II+GY+Q    ++AL LF  +  EG+  
Sbjct: 372 GLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGF 431

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           +   + ++L + +GL+ +   +++HG  ++ G  SD+ ++N+++D YGKC +++ +  +F
Sbjct: 432 NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIF 491

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E     D+VS+TSMI++Y   G   EAL+LF  M +  ++ D     S L+A ++LS  +
Sbjct: 492 EECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFE 551

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GK+L+  I++ GF L+    +SLV+MYA+CG++D A + F+ +  + ++ W++MI    
Sbjct: 552 QGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLA 611

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG G+ A+ LF +M  E  +P+HIT +++L AC+H+GL+ E K + E M   +   P  
Sbjct: 612 QHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQ 671

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC++DLLGRA  + EA + V  M  E  A VW ALLGA R+H + ELG   A+ L  
Sbjct: 672 EHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFI 731

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P   G +VL++N++A++ KW++V +VR  MR S +KK PG SWIE+ +K+++F+  D+
Sbjct: 732 LEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDR 791

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH  S EIY KL E+++ +++  GYV   +  LH+VE+ EK  +LY HSE+LA+A+G++ 
Sbjct: 792 SHYRSQEIYAKLDELSDLMDK-AGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIA 850

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +G+ IR+ KNLRVCVDCH+  K + ++  RE++VRD NRFHHF+ G CSCGDYW
Sbjct: 851 TPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 172/622 (27%), Positives = 314/622 (50%), Gaps = 35/622 (5%)

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           + ++  ++  C   K L  G +IH  + K G      I N L+ +Y+KC  F  AR+L D
Sbjct: 56  SVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVD 115

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
              E  D+V W+++IS Y+ +G    AL  F EM  +G+  N +TF + L+AC       
Sbjct: 116 ESSEP-DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLR 174

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           +G ++H   V SG    V+VAN L+ MYA+C +  ++  +  ++  ++ VSWN++ + +V
Sbjct: 175 IGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYV 234

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q D   +A+  F E+  +G KP++    + V+A   L +   GK +H Y IK G+  D  
Sbjct: 235 QXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF 294

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
             N L+DMYAK   +     VF ++   D +SW  +IAG   +  H +ALEL   ++   
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK--- 351

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
                                   +++H  +++  + SDL +   +VD+Y KC  ++ +R
Sbjct: 352 ------------------------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 387

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
             F  +  KD+++W ++IS Y       EAL LF  M++  +  +  TL + L + + L 
Sbjct: 388 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 447

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           ++   ++++G  ++ GF+ +  V +SL+D Y +C  ++ A ++F      DL+ +TSMI 
Sbjct: 448 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMIT 507

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQL 595
           A   +G+G+ A+ LF +M+     PD     +LL AC++     +GK+  + I++  + L
Sbjct: 508 AYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL 567

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           D +  +   LV++  +   +++A +    +  E     W A++G    H +      +  
Sbjct: 568 DIFAGN--SLVNMYAKCGSIDDAGRAFSEL-TERGIVSWSAMIGGLAQHGHGRQALQLFN 624

Query: 656 KLLELDPGNPGNYVLISNVFAA 677
           ++L+   G   N++ + +V  A
Sbjct: 625 QMLK--EGVSPNHITLVSVLGA 644



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 64/123 (52%)

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           L+++ N    S++    LS   +   L+ G +++  I + G + + S+ + L+++Y++C 
Sbjct: 46  LIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCR 105

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
               A K+ +     DL+ W+++I+    +G G  A+  F++M       +  TF ++L 
Sbjct: 106 XFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLK 165

Query: 572 ACS 574
           ACS
Sbjct: 166 ACS 168


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 304/721 (42%), Positives = 458/721 (63%), Gaps = 2/721 (0%)

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           F +   + + V+W   I  Y  +G   +AL L+ +MQR G+  +   F++ ++AC   S 
Sbjct: 76  FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G ++H   +  G    V V  AL +MY +CG +  A  V  ++  +D VSWN+++ G
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG 195

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           + QN    +A+  F E+Q  G KP+    V+ +     L  L  GK++H YAI+ G  SD
Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESD 255

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + + N L++MYAKC  VN   ++F +M  +D  SW  II GY+ N+ H +AL  F  +Q+
Sbjct: 256 VLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQV 315

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
            G+  + + + SVL AC+ L  + Q ++IHGY IR G  S+ V+ NA+V++Y KCGN++ 
Sbjct: 316 RGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNS 375

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +  +FE +  K+VV+W ++IS Y  +G  +EAL LF  M    ++ DS  +VS L A + 
Sbjct: 376 AYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAH 435

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
              L++GK+++G+ IR GF     V + LVD+YA+CG ++ A K+F  +  +D++ WT+M
Sbjct: 436 FLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTM 495

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I A G+HG G+ A+ LF KM+      DHI F A+L ACSH+GL+++G ++ + M+ DY 
Sbjct: 496 ILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYG 555

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           L P  EHYACLVDLLGRA HL+EA   +++M +EP A VW ALLGACR+H N ELGE  A
Sbjct: 556 LAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAA 615

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           K L ELDP N G YVL+SN++A +++W+DV ++R  M+  G+KK PG S + +   + +F
Sbjct: 616 KHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTF 675

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           +  D++H +S++IY  L  + E++ R+ GYV  T   L +VEEE K  +L  HSE+LAI+
Sbjct: 676 LVGDRTHPQSEQIYAMLEILYEQM-RKAGYVPNTNLALQDVEEEAKENILSSHSEKLAIS 734

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G++ ++ G  IRI KNLRVC DCH+  K +S++ GRE++VRDANRFHH + G CSCGDY
Sbjct: 735 FGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDY 794

Query: 835 W 835
           W
Sbjct: 795 W 795



 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 197/553 (35%), Positives = 306/553 (55%), Gaps = 16/553 (2%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           W   +  YV NG   + L  Y +M+  GI+ D   F  VIKAC    DL  G K+H  ++
Sbjct: 88  WKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDII 147

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
             G++S   +  +L +MY KC     ARQ+FDRM  K DVV WN+II+ YS +GQ  EAL
Sbjct: 148 ARGFESDVIVGTALASMYTKCGSLENARQVFDRM-PKRDVVSWNAIIAGYSQNGQPYEAL 206

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
            LF EMQ  G+  N+ T V+ +  C        G +IH   ++SG    V V N L+ MY
Sbjct: 207 ALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMY 266

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
           A+CG +  A  +  ++  +D  SWN+++ G+  N  + +A+ FF  +Q  G KP+ +  V
Sbjct: 267 AKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMV 326

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           + + A   L  L  G+++H YAI+ GF S+  +GN L++MYAKC  VN   ++F +M  +
Sbjct: 327 SVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKK 386

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           + ++W  II+GY+Q+    +AL LF  +Q +G+  D   I SVL AC+    + Q K+IH
Sbjct: 387 NVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIH 446

Query: 386 GYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           GY IR G  S++V+   +VD+Y KCGN++ ++ +FE +  +DVVSWT+MI +Y  +G   
Sbjct: 447 GYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGE 506

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF-IIRKGFNLEGSVA--S 501
           +AL LF  M E   + D I   + L+A S   ++ +G  L  F  ++  + L   +   +
Sbjct: 507 DALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQG--LQYFQCMKSDYGLAPKLEHYA 564

Query: 502 SLVDMYARCGALDIANKVF-NCVQTKDLILWTSMINANGLHGR---GKVAIDLFYKMEAE 557
            LVD+  R G LD AN +  N     D  +W +++ A  +H     G+ A    ++++  
Sbjct: 565 CLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELD-- 622

Query: 558 SFAPDHITFLALL 570
              PD+  +  LL
Sbjct: 623 ---PDNAGYYVLL 632



 Score =  278 bits (712), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 154/444 (34%), Positives = 241/444 (54%), Gaps = 14/444 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A Q+FD++ +R V +WNA++  Y  NG+P   L  +S M+V GI  ++ T
Sbjct: 164 MYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSST 223

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+  CA L  L+ G +IH   ++ G +S   +VN LV MYAKC +   A +LF+RM 
Sbjct: 224 LVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMP 283

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DV  WN+II  YS + Q  EAL  F  MQ  G+  N+ T V+ L AC        G 
Sbjct: 284 IR-DVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQ 342

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   ++SG      V NAL+ MYA+CG +  A  +  ++  K+ V+WN++++G+ Q+ 
Sbjct: 343 QIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHG 402

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E+Q  G KPD    V+ + A      L  GK++H Y I+ GF S++ +G 
Sbjct: 403 HPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGT 462

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+YAKC  VN   ++F +M  QD +SWTT+I  Y  +     AL LF  +Q  G   
Sbjct: 463 GLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKL 522

Query: 361 DVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           D +   ++L ACS       GL+     K  +G   +     L     +VD+ G+ G++D
Sbjct: 523 DHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPK-----LEHYACLVDLLGRAGHLD 577

Query: 414 YSRNVFESIE-SKDVVSWTSMISS 436
            +  + +++    D   W +++ +
Sbjct: 578 EANGIIKNMSLEPDANVWGALLGA 601


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 329/841 (39%), Positives = 499/841 (59%), Gaps = 8/841 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MY  CGS  D+  +FDK+ ++ +F WNA++ AY  N      +  +S +  V     D F
Sbjct: 43  MYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNF 102

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T PCVIKACA L DL  G  IHG+  K    S  F+ N+L+AMY KC    +A ++F+ M
Sbjct: 103 TLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHM 162

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACEDSSFET 177
            E+ ++V WNSII  +S +G   E+   FREM       V +  T V  L  C       
Sbjct: 163 PER-NLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIE 221

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            GM +H   VK G N ++ V N+LI MY++C  ++EA  +  + + K+ VSWNSM+ G+ 
Sbjct: 222 KGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYA 281

Query: 238 QNDLYCKAMQFFRELQ--GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           + +  C+     +++Q   A  K D+   +N +        L + KELH Y+ + G  S+
Sbjct: 282 REEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSN 341

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             + N  +  Y +C  +    RVF  M  +   SW  ++ GYAQN+   KAL+L+  +  
Sbjct: 342 ELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTD 401

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
            GLD D   IGS+L+ACS +K +   +EIHG+ +R GL+ D  I  +++ +Y  CG    
Sbjct: 402 SGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFA 461

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           ++ +F+ +E + +VSW  MI+ Y  NGL +EA+ LF  M    ++   I ++    A S 
Sbjct: 462 AQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQ 521

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           LS L+ GKEL+ F ++     +  V+SS++DMYA+ G + ++ ++F+ ++ KD+  W  +
Sbjct: 522 LSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVI 581

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I   G+HGRGK A++LF KM      PD  TF  +L ACSH+GL+ +G ++   M   + 
Sbjct: 582 IAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHN 641

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           ++P  EHY C+VD+LGRA  +++A + +  M  +P + +W +LL +CR+H N  LGE VA
Sbjct: 642 IEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVA 701

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
            KLLEL+P  P NYVLISN+FA S KW DV +VR RM+  GL+K  G SWIE+G K+H+F
Sbjct: 702 NKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNF 761

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           +  D+   E +E+ +    +  K+    GY   T  VLH++EEE+K+ +L GHSE+LAI+
Sbjct: 762 LIGDEMLPELEEVRETWRRLEVKIS-SIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAIS 820

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G+L + +G  +R+ KNLR+C DCH+  K +S++  R++VVRD  RFHHF  G+CSCGDY
Sbjct: 821 FGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDY 880

Query: 835 W 835
           W
Sbjct: 881 W 881



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 275/529 (51%), Gaps = 8/529 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-LVAMYAKCYDFRKARQLFDRMGEK 122
           +++AC   KD++ G ++H +V        DF++N+ ++ MY+ C     +R +FD++  +
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL-RR 62

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLGME 181
           +++  WN+I+SAY+ +    +A+ +F E+  V     + +T    ++AC       LG  
Sbjct: 63  KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH    K      V+V NALIAMY +CG + EA  V   +  ++ VSWNS++ GF +N  
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182

Query: 242 YCKAMQFFRELQGAGQK--PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             ++   FRE+    +   PD    V  +       ++  G  +H  A+K G   +L + 
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-- 357
           N+L+DMY+KC  ++    +F +   ++ +SW ++I GYA+     +   L + +Q E   
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           + AD   I +VL  C     +   KE+HGY  R GL S+ ++ NA +  Y +CG +  S 
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSE 362

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF+ +++K V SW +++  Y  N    +AL+L+  M ++ ++ D  T+ S L A S + 
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 422

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L  G+E++GF +R G  ++  +  SL+ +Y  CG    A  +F+ ++ + L+ W  MI 
Sbjct: 423 SLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIA 482

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
               +G    AI+LF +M ++   P  I  + +  ACS    +  GK+ 
Sbjct: 483 GYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL 531



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 114/223 (51%), Gaps = 5/223 (2%)

Query: 365 IGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
           +G +L AC   K +   + +H  +    +  +D V+   I+ +Y  CG+   SR VF+ +
Sbjct: 1   MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKG 481
             K++  W +++S+Y  N L  +A+ +F  L++    + D+ TL   + A + L  L  G
Sbjct: 61  RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           + ++G   +     +  V ++L+ MY +CG ++ A KVF  +  ++L+ W S+I     +
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSEN 180

Query: 542 GRGKVAIDLFYKM--EAESFAPDHITFLALLYACSHSGLINEG 582
           G  + + + F +M    ESF PD  T + +L  C+    I +G
Sbjct: 181 GFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKG 223


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 328/837 (39%), Positives = 491/837 (58%), Gaps = 4/837 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA+ +FDK+ +R V +W  M+G     G        + +M+  G   +++T
Sbjct: 74  MYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYT 133

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++ A A    L+   ++H   +  G      + N+LV MYAK      AR +FD M 
Sbjct: 134 YVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMV 193

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D+  W  +I   +  G+  EA  LF +M+R G + N  T+++ L A   +S   L  
Sbjct: 194 ER-DIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEW 252

Query: 181 --EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
             E+H    K+G    + V NALI MYA+CG + +A  V   + ++D +SWN+M+ G  Q
Sbjct: 253 VKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQ 312

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N    +A   F ++Q  G  PD    ++ ++     G     KE+H +A++ G VSDL++
Sbjct: 313 NGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRV 372

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G+  + MY +C  ++    +F ++  ++  +W  +I G AQ  C  +AL LF  ++ EG 
Sbjct: 373 GSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGF 432

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNV 418
             D     ++L A  G + +   KE+H Y I  GL DL + NA+V +Y KCGN  Y++ V
Sbjct: 433 FPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQV 492

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  ++V +WT MIS    +G  +EA  LF  M    +  D+ T VS LSA +S   L
Sbjct: 493 FDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGAL 552

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           +  KE++   +  G   +  V ++LV MYA+CG++D A +VF+ +  +D+  WT MI   
Sbjct: 553 EWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGL 612

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             HGRG  A+DLF KM+ E F P+  +F+A+L ACSH+GL++EG++    +  DY ++P 
Sbjct: 613 AQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPT 672

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY C+VDLLGRA  LEEA  F+ +M IEP    W ALLGAC  + N E+ E  AK+ L
Sbjct: 673 MEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERL 732

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           +L P +   YVL+SN++AA+  W+    VR  M+  G++K PG SWIE+ N+IHSF+  D
Sbjct: 733 KLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGD 792

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            SH ES EIY KL ++ ++L+ E GYV  T+ VL N ++E K Q L  HSE+LAI YG++
Sbjct: 793 TSHPESKEIYAKLKDLIKRLKAE-GYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLM 851

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +   + IR+ KNLRVC DCH+  K +S++ GRE+V RDA RFHHF+ GVCSCGDYW
Sbjct: 852 HTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908



 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 183/554 (33%), Positives = 290/554 (52%), Gaps = 5/554 (0%)

Query: 29  MLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
           M+G Y   G     ++ YS+MR  G   +  T+  ++KAC     L  G KIH  +++ G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
           + S   +  +LV MY KC     A+ +FD+M E+ +V+ W  +I   +  G+  EA   F
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVER-NVISWTVMIGGLAHYGRGQEAFHRF 119

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            +MQR G + N+YT+V+ L A   +       E+H+  V +G  L + V NAL+ MYA+ 
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G + +A  V   +  +D  SW  M+ G  Q+    +A   F +++  G  P+    ++ +
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239

Query: 269 SASG--RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
           +AS     G L   KE+H +A K GF+SDL++GN L+ MYAKC  ++    VF  M  +D
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            ISW  +I G AQN C  +A  +F  +Q EG   D     S+L            KE+H 
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           + +  GL SDL + +A V +Y +CG+ID ++ +F+ +  ++V +W +MI          E
Sbjct: 360 HAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGRE 419

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL LF  M       D+ T V+ LSA      L+  KE++ + I  G  ++  V ++LV 
Sbjct: 420 ALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVH 478

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MYA+CG    A +VF+ +  +++  WT MI+    HG G  A  LF +M  E   PD  T
Sbjct: 479 MYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATT 538

Query: 566 FLALLYACSHSGLI 579
           ++++L AC+ +G +
Sbjct: 539 YVSILSACASTGAL 552



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 248/483 (51%), Gaps = 18/483 (3%)

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I  Y+  G   +A+ ++ +M+R G   N  T+++ L+AC        G +IHA  ++SG
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               V V  AL+ MY +CG + +A  +  ++  ++ +SW  M+ G        +A   F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           ++Q  G  P+    V+ ++A+   G L   KE+H++A+  G   DL++GN L+ MYAK  
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL- 369
            ++    VF  M  +D  SWT +I G AQ+    +A  LF  ++  G   ++    S+L 
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 370 -MACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
             A +    +   KE+H +  + G +SDL + NA++ +Y KCG+ID +R VF+ +  +DV
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           +SW +MI     NG  +EA  +F  M +     DS T +S L+   S    +  KE++  
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH 360

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
            +  G   +  V S+ V MY RCG++D A  +F+ +  +++  W +MI        G+ A
Sbjct: 361 AVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREA 420

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR--CDYQLDPWPEHYACL 605
           + LF +M  E F PD  TF+ +L A       N G++ LE ++    Y +D      A L
Sbjct: 421 LSLFLQMRREGFFPDATTFVNILSA-------NVGEEALEWVKEVHSYAID------AGL 467

Query: 606 VDL 608
           VDL
Sbjct: 468 VDL 470


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 311/837 (37%), Positives = 500/837 (59%), Gaps = 6/837 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MY K G +  A ++FDK+ +R V  WNAM+     + +P   ++ +  M+++G+   + +
Sbjct: 173  MYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVS 232

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               +      L +++    IHG V +  + S   + N L+ +Y+KC D   AR++FD+M 
Sbjct: 233  LLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMV 290

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +++DV  W ++++ Y+ +G  +E L LF +M+   +  N  + V+A  A  ++     G 
Sbjct: 291  DQDDVS-WGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGK 349

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            EIH   ++   +  + VA  L+ MYA+CG+  +A  + + L+ +D V+W++++   VQ  
Sbjct: 350  EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTG 409

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               +A+  F+E+Q    KP++V  ++ + A   L  L  GK +H + +K    SDL  G 
Sbjct: 410  YPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGT 469

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+ MYAKC         F +M+++D ++W ++I GYAQ      A+++F  ++L  ++ 
Sbjct: 470  ALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINP 529

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
            D   +  V+ AC+ L  + Q   IHG I++ G  SD  + NA++D+Y KCG++  +  +F
Sbjct: 530  DAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589

Query: 420  ESIE-SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
               + +KD V+W  +I++Y+ NG A EA+  F+ M   N   +S+T VS L AA+ L+  
Sbjct: 590  NKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAF 649

Query: 479  KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            ++G   +  II+ GF     V +SL+DMYA+CG LD + K+FN +  KD + W +M++  
Sbjct: 650  REGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGY 709

Query: 539  GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             +HG G  AI LF  M+      D ++F+++L AC H+GL+ EG+K    M   Y + P 
Sbjct: 710  AVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPD 769

Query: 599  PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
             EHYAC+VDLLGRA   +E   F++ M +EP A VW ALLG+CR+HSN +LGE+    L+
Sbjct: 770  LEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV 829

Query: 659  ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
            +L+P NP ++V++S+++A S +W D  + R +M   GLKKTPG SW+E+ NK+H+F   D
Sbjct: 830  KLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGD 889

Query: 719  KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            KSH + + ++     + EK+E+  GYV     VL NVEEE+K   LY HSERLAI + +L
Sbjct: 890  KSHPQLESMHLLWNTLLEKMEKI-GYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALL 948

Query: 779  KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             +  GS I+I KNLRVC DCH+  K +S++  R ++VRDA RFHHFE G+CSC DYW
Sbjct: 949  NTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 197/643 (30%), Positives = 338/643 (52%), Gaps = 13/643 (2%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +FD     +   WN+M+ AY  + +    LE Y  M   G+  D +TF  V+KAC  
Sbjct: 82  ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
             +L  G   HG + + G +   FI   LV MY+K  D ++AR++FD+M  K DVV WN+
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM-PKRDVVAWNA 200

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA-CEDSSFETLGMEIHAATVKS 189
           +I+  S S    EA+  FR MQ VG+  ++ + +      C+ S+ E L   IH    + 
Sbjct: 201 MIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIE-LCRSIHGYVFR- 258

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
            ++    V+N LI +Y++CG +  A  V  Q+ ++D VSW +M+ G+  N  + + ++ F
Sbjct: 259 -RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELF 317

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            +++    + ++V  V+A  A+    +L  GKE+H  A++Q   SD+ +   LM MYAKC
Sbjct: 318 DKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKC 377

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
                  ++F+ +  +D ++W+ IIA   Q     +AL LF+ +Q + +  + + + S+L
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSIL 437

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            AC+ L  +   K IH + ++  + SDL    A+V +Y KCG    +   F  + S+D+V
Sbjct: 438 PACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIV 497

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           +W S+I+ Y   G    A+++FY +  + +  D+ T+V  + A + L+ L +G  ++G I
Sbjct: 498 TWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI 557

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKVA 547
           ++ GF  +  V ++L+DMYA+CG+L  A  +FN    TKD + W  +I A   +G  K A
Sbjct: 558 VKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA 617

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA--CL 605
           I  F++M  E+F P+ +TF+++L A ++     EG  F     C  Q+           L
Sbjct: 618 ISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF---HACIIQMGFLSNTLVGNSL 674

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           +D+  +   L+ + +    M  + T   W A+L    VH + +
Sbjct: 675 IDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVHGHGD 716



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 287/523 (54%), Gaps = 8/523 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P ++ +C  L  L    +IH  ++  G+     I + L+ +Y+  +    AR +FD   
Sbjct: 35  YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTP 90

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
               + LWNS+I AY+ S Q  EAL ++  M   GL  + YTF   L+AC  +     G+
Sbjct: 91  NPSRI-LWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             H    + G    V++   L+ MY++ G +  A  V  ++  +D V+WN+M+ G  Q++
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             C+A+ FFR +Q  G +P  V  +N      +L N+   + +H Y  ++ F S   + N
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSN 267

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y+KC  V+   RVF QM  QD +SW T++AGYA N C ++ LELF  ++L  +  
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           + +   S  +A +    + + KEIHG  +++ + SD+++   ++ +Y KCG  + ++ +F
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF 387

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             ++ +D+V+W+++I++ V  G   EAL LF  M    ++ + +TL+S L A + LS+LK
Sbjct: 388 WGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLK 447

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GK ++ F ++   + + S  ++LV MYA+CG    A   FN + ++D++ W S+IN   
Sbjct: 448 LGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYA 507

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
             G    AID+FYK+   +  PD  T + ++ AC+    +++G
Sbjct: 508 QIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG 550



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 36/211 (17%)

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           SS   L    +++  II  GF    S+ + L+++Y+     D+A  VF+       ILW 
Sbjct: 40  SSCKHLNPLLQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWN 98

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS------------------ 574
           SMI A     +   A++++Y M  +   PD  TF  +L AC+                  
Sbjct: 99  SMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRR 158

Query: 575 --------HSGLINEGKKFLEIMRCDYQLDPWPEH----YACLVDLLGRANHLEEAYQFV 622
                    +GL++   K  ++ R     D  P+     +  ++  L ++    EA  F 
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218

Query: 623 RSMQ---IEPTAEVWCALL-GACRVHSNKEL 649
           RSMQ   +EP++     L  G C++ SN EL
Sbjct: 219 RSMQLVGVEPSSVSLLNLFPGICKL-SNIEL 248


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 322/872 (36%), Positives = 510/872 (58%), Gaps = 41/872 (4%)

Query: 2    YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
            Y + G + DA    D++   +V TWNA++  YV           + RM  +G+  D FTF
Sbjct: 220  YARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTF 279

Query: 62   PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
               ++ C  L+  D G ++H  ++ CG+    F+ N+L+ MYAKC D     ++FD MGE
Sbjct: 280  ASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGE 339

Query: 122  KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            +  V  WNSIISA +  G   +AL LF  MQ  G  +N +   + L A    +    G E
Sbjct: 340  RNQVT-WNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRE 398

Query: 182  IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            +H   V++  N  + + +AL+ MY++CG + EA  V   L  ++ VS+N++L G+VQ   
Sbjct: 399  LHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGK 458

Query: 242  YCKAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ + ++Q   G +PDQ      ++      N   G+++HA+ I+     ++ +  
Sbjct: 459  AEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVET 518

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+ MY++C  +NY   +F +M  ++  SW ++I GY QN    +AL LF+ +QL G+  
Sbjct: 519  ELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKP 578

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI-VDVYGKCGNIDYS---- 415
            D   + S+L +C  L    + +E+H +I+R  + +  IL  + VD+Y KCG++DY+    
Sbjct: 579  DCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVY 638

Query: 416  ---------------------------RNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
                                       +N+F+ +E ++   W S+++ Y + GL  E+  
Sbjct: 639  DQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFN 698

Query: 449  LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF-NLEGSVASSLVDMY 507
             F  M E+++E D +T+V+ ++  SSL  L+ G +L+  II+KGF N    + ++LVDMY
Sbjct: 699  HFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMY 758

Query: 508  ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
            ++CGA+  A  VF+ +  K+++ W +MI+    HG  K A+ L+ +M  +   P+ +TFL
Sbjct: 759  SKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFL 818

Query: 568  ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
            A+L ACSH+GL+ EG +    M+ DY ++   EHY C+VDLLGRA  LE+A +FV  M I
Sbjct: 819  AILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPI 878

Query: 628  EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
            EP    W ALLGACRVH + ++G + A++L ELDP NPG YV++SN++AA+ +WK+VE +
Sbjct: 879  EPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDI 938

Query: 688  RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREG-GYVA 746
            R  M+  G+KK PG SWIEI ++I  F A  K+H +++EIY  L  +T  L+ +G GY+ 
Sbjct: 939  RQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLT--LQSKGLGYIP 996

Query: 747  QTQFVLHNVEE---EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
             T F+L NV++   EE+ + L  HSERLA++ G++   + S IR+ KNLR+C DCH+  K
Sbjct: 997  DTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATK 1056

Query: 804  LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             +S++ GR ++ RD NRFHHFE G CSCGDYW
Sbjct: 1057 FISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088



 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 192/602 (31%), Positives = 325/602 (53%), Gaps = 11/602 (1%)

Query: 1   MYGKCGSVLD---AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
           +Y + G + D   A +LF+++ +R +  WN M+ AY    + + VL  Y RMR  G   D
Sbjct: 115 LYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSD 174

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            FTFP VIKAC  ++D+    ++   V+K G +   F+  +LV  YA+      A    D
Sbjct: 175 KFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLD 234

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            + E   VV WN++I+ Y       EA G+F  M ++G+  + +TF +AL+ C       
Sbjct: 235 EI-EGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRD 293

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G ++H+  +  G     +V NALI MYA+C        V  ++  ++ V+WNS+++   
Sbjct: 294 GGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEA 353

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q   +  A+  F  +Q +G K ++    + + AS  L ++  G+ELH + ++    SD+ 
Sbjct: 354 QFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDII 413

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE- 356
           +G+ L+DMY+KC  V    +VF  +  ++ +S+  ++AGY Q     +ALEL+  +Q E 
Sbjct: 414 LGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSED 473

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
           G+  D     ++L  C+  +  +Q ++IH ++IR  ++ ++++   +V +Y +CG ++Y+
Sbjct: 474 GIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYA 533

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           + +F  +  ++  SW SMI  Y  NG   EAL LF  M    ++ D  +L S LS+  SL
Sbjct: 534 KEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSL 593

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           S  +KG+EL+ FI+R     EG +   LVDMYA+CG++D A KV++    KD+IL   M+
Sbjct: 594 SDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMV 653

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG-KKFLEIMRCDYQ 594
           +A    GR   A +LF +ME  + A     + ++L   ++ GL  E    FLE++  D +
Sbjct: 654 SAFVNSGRANDAKNLFDQMEQRNTA----LWNSILAGYANKGLKKESFNHFLEMLESDIE 709

Query: 595 LD 596
            D
Sbjct: 710 YD 711



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 290/529 (54%), Gaps = 18/529 (3%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK-------CYD 108
           V+   +  +I+ C        G  IH  ++  GY+   +++  ++ +YA+       CY 
Sbjct: 69  VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCY- 127

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              AR+LF+ M E+ ++  WN++I AY+     +E L L+  M+  G  ++ +TF + ++
Sbjct: 128 ---ARKLFEEMPER-NLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIK 183

Query: 169 ACEDSSFETLG--MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           AC   + E +G   ++ ++ VK+G N  ++V  AL+  YAR G M +A   L ++E    
Sbjct: 184 AC--IAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSV 241

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           V+WN+++ G+V+   + +A   F  +   G  PD     +A+   G L +   GK++H+ 
Sbjct: 242 VTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSK 301

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            I  GF  D  +GN L+DMYAKC       +VF +M  ++ ++W +II+  AQ      A
Sbjct: 302 LIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDA 361

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDV 405
           L LF  +Q  G  ++   +GS+LMA +GL  + + +E+HG+++R  L SD+++ +A+VD+
Sbjct: 362 LVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDM 421

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM-NEANVESDSIT 464
           Y KCG ++ +  VF S+  ++ VS+ ++++ YV  G A EALEL++ M +E  ++ D  T
Sbjct: 422 YSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFT 481

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
             + L+  ++     +G++++  +IR        V + LV MY+ CG L+ A ++FN + 
Sbjct: 482 FTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA 541

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
            ++   W SMI     +G  + A+ LF +M+     PD  +  ++L +C
Sbjct: 542 ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 590



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 185/370 (50%), Gaps = 16/370 (4%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN---YMGRVFYQMTAQDFISWTTIIAG 336
           GK +H   I  G+  D  +   ++ +YA+  C++   Y  ++F +M  ++  +W T+I  
Sbjct: 90  GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-D 395
           YA+ + +++ L L+  ++  G  +D     SV+ AC  ++ M   +++   +++ GL+ +
Sbjct: 150 YARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCN 209

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           L +  A+VD Y + G +D +    + IE   VV+W ++I+ YV      EA  +F  M +
Sbjct: 210 LFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLK 269

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
             V  D+ T  SAL    +L     GK+++  +I  GF  +  V ++L+DMYA+C   + 
Sbjct: 270 IGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEES 329

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
             KVF+ +  ++ + W S+I+A    G    A+ LF +M+   +  +     ++L A + 
Sbjct: 330 CLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAG 389

Query: 576 SGLINEGKKF-----LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
              I +G++        ++  D  L       + LVD+  +   +EEA+Q  RS+ +E  
Sbjct: 390 LADIGKGRELHGHLVRNLLNSDIILG------SALVDMYSKCGMVEEAHQVFRSL-LERN 442

Query: 631 AEVWCALLGA 640
              + ALL  
Sbjct: 443 EVSYNALLAG 452



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 65/141 (46%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A  +FD ++ + + +WNAM+  Y  +G     L  Y  M   G+  +  T
Sbjct: 757 MYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVT 816

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-------LVAMYAKCYDFRKAR 113
           F  ++ AC+    ++ G +I   +        D+ + +       +V +  +      A+
Sbjct: 817 FLAILSACSHTGLVEEGLRIFTSM------QEDYNIEAKAEHYTCMVDLLGRAGRLEDAK 870

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
           +  ++M  + +V  W +++ A
Sbjct: 871 EFVEKMPIEPEVSTWGALLGA 891


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 310/837 (37%), Positives = 498/837 (59%), Gaps = 6/837 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MY K G +  A ++FDK+ +R V  WNAM+     + +P   ++ +  M+++G+   + +
Sbjct: 173  MYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVS 232

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               +      L +++    IHG V +  + S   + N L+ +Y+KC D   AR++FD+M 
Sbjct: 233  LLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMV 290

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +++DV  W ++++ Y+ +G  +E L LF +M+   +  N  + V+A  A  ++     G 
Sbjct: 291  DQDDVS-WGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGK 349

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            EIH   ++   +  + VA  L+ MYA+CG+  +A  + + L+ +D V+W++++   VQ  
Sbjct: 350  EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTG 409

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               +A+  F+E+Q    KP++V  ++ + A   L  L  GK +H + +K    SDL  G 
Sbjct: 410  YPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGT 469

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+ MYAKC         F +M+++D ++W ++I GYAQ      A+++F  ++L  ++ 
Sbjct: 470  ALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINP 529

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
            D   +  V+ AC+ L  + Q   IHG I++ G  SD  + NA++D+Y KCG++  +  +F
Sbjct: 530  DAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589

Query: 420  ESIE-SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
               + +KD V+W  +I++Y+ NG A EA+  F+ M   N   +S+T VS L AA+ L+  
Sbjct: 590  NKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAF 649

Query: 479  KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            ++G   +  II+ GF     V +SL+DMYA+CG L  + K+FN +  KD + W +M++  
Sbjct: 650  REGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGY 709

Query: 539  GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             +HG G  AI LF  M+      D ++F+++L AC H GL+ EG+K    M   Y + P 
Sbjct: 710  AVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPD 769

Query: 599  PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
             EHYAC+VDLLGRA   +E   F++ M +EP A VW ALLG+CR+HSN +LGE+    L+
Sbjct: 770  LEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV 829

Query: 659  ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
            +L+P NP ++V++S+++A S +W D  + R +M   GLKKTPG SW+E+ NK+H+F   D
Sbjct: 830  KLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGD 889

Query: 719  KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            KSH + + ++     + EK+E+  GYV     VL NVEEE+K   LY HSERLAI + +L
Sbjct: 890  KSHPQLESMHLLWNTLLEKMEKI-GYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALL 948

Query: 779  KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             +  GS I+I KNLRVC DCH+  K +S++  R ++VRDA RFHHFE G+CSC DYW
Sbjct: 949  NTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 197/643 (30%), Positives = 337/643 (52%), Gaps = 13/643 (2%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +FD     +   WN+M+ AY  + +    LE Y  M   G+  D +TF  V+KAC  
Sbjct: 82  ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
             +L  G   HG + + G +   FI   LV MY+K  D ++AR++FD+M  K DVV WN+
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM-PKRDVVAWNA 200

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA-CEDSSFETLGMEIHAATVKS 189
           +I+  S S    EA+  FR MQ VG+  ++ + +      C+ S+ E L   IH    + 
Sbjct: 201 MIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIE-LCRSIHGYVFR- 258

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
            ++    V+N LI +Y++CG +  A  V  Q+ ++D VSW +M+ G+  N  + + ++ F
Sbjct: 259 -RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELF 317

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            +++    + ++V  V+A  A+    +L  GKE+H  A++Q   SD+ +   LM MYAKC
Sbjct: 318 DKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKC 377

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
                  ++F+ +  +D ++W+ IIA   Q     +AL LF+ +Q + +  + + + S+L
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSIL 437

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            AC+ L  +   K IH + ++  + SDL    A+V +Y KCG    +   F  + S+D+V
Sbjct: 438 PACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIV 497

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           +W S+I+ Y   G    A+++FY +  + +  D+ T+V  + A + L+ L +G  ++G I
Sbjct: 498 TWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI 557

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKVA 547
           ++ GF  +  V ++L+DMYA+CG+L  A  +FN    TKD + W  +I A   +G  K A
Sbjct: 558 VKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA 617

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA--CL 605
           I  F++M  E+F P+ +TF+++L A ++     EG  F     C  Q+           L
Sbjct: 618 ISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF---HACIIQMGFLSNTLVGNSL 674

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           +D+  +   L  + +    M  + T   W A+L    VH + +
Sbjct: 675 IDMYAKCGQLXYSEKLFNEMDHKDTVS-WNAMLSGYAVHGHGD 716



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 287/523 (54%), Gaps = 8/523 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P ++ +C  L  L    +IH  ++  G+     I + L+ +Y+  +    AR +FD   
Sbjct: 35  YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTP 90

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
               + LWNS+I AY+ S Q  EAL ++  M   GL  + YTF   L+AC  +     G+
Sbjct: 91  NPSRI-LWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             H    + G    V++   L+ MY++ G +  A  V  ++  +D V+WN+M+ G  Q++
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             C+A+ FFR +Q  G +P  V  +N      +L N+   + +H Y  ++ F S   + N
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSN 267

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y+KC  V+   RVF QM  QD +SW T++AGYA N C ++ LELF  ++L  +  
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           + +   S  +A +    + + KEIHG  +++ + SD+++   ++ +Y KCG  + ++ +F
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF 387

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             ++ +D+V+W+++I++ V  G   EAL LF  M    ++ + +TL+S L A + LS+LK
Sbjct: 388 WGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLK 447

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GK ++ F ++   + + S  ++LV MYA+CG    A   FN + ++D++ W S+IN   
Sbjct: 448 LGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYA 507

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
             G    AID+FYK+   +  PD  T + ++ AC+    +++G
Sbjct: 508 QIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG 550



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 36/211 (17%)

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           SS   L    +++  II  GF    S+ + L+++Y+     D+A  VF+       ILW 
Sbjct: 40  SSCKHLNPLLQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWN 98

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS------------------ 574
           SMI A     +   A++++Y M  +   PD  TF  +L AC+                  
Sbjct: 99  SMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRR 158

Query: 575 --------HSGLINEGKKFLEIMRCDYQLDPWPEH----YACLVDLLGRANHLEEAYQFV 622
                    +GL++   K  ++ R     D  P+     +  ++  L ++    EA  F 
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218

Query: 623 RSMQ---IEPTAEVWCALL-GACRVHSNKEL 649
           RSMQ   +EP++     L  G C++ SN EL
Sbjct: 219 RSMQLVGVEPSSVSLLNLFPGICKL-SNIEL 248


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  619 bits (1597), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 306/838 (36%), Positives = 504/838 (60%), Gaps = 5/838 (0%)

Query: 1    MYGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
            MY +CGS+ +A Q+++K+  ++RTV +WNAM+  YV  G     L+    M+  G+++  
Sbjct: 185  MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244

Query: 59   FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
             T   ++ +C     L+CG +IH   +K        + N ++ MYAKC    +AR++FD+
Sbjct: 245  ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304

Query: 119  MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
            M E + VV W  II  Y+  G    A  +F++MQ+ G+V N  T++  L A    +    
Sbjct: 305  M-ETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKW 363

Query: 179  GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            G  +H+  + +G    + V  AL+ MYA+CG   +   V  +L N+D ++WN+M+ G  +
Sbjct: 364  GKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAE 423

Query: 239  NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
               + +A + + ++Q  G  P+++  V  ++A      L  G+E+H+  +K GF+ D+ +
Sbjct: 424  GGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISV 483

Query: 299  GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             N L+ MYA+C  +     +F +M  +D ISWT +I G A++    +AL +F+ +Q  GL
Sbjct: 484  QNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGL 543

Query: 359  DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
              + +   S+L ACS    +   + IH  +I  GL +D  + N +V++Y  CG++  +R 
Sbjct: 544  KPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQ 603

Query: 418  VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            VF+ +  +D+V++ +MI  Y  + L  EAL+LF  + E  ++ D +T ++ L+A ++   
Sbjct: 604  VFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGS 663

Query: 478  LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
            L+  KE++  +++ G+  + S+ ++LV  YA+CG+   A  VF+ +  +++I W ++I  
Sbjct: 664  LEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGG 723

Query: 538  NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
               HGRG+  + LF +M+ E   PD +TF++LL ACSH+GL+ EG+++   M  D+ + P
Sbjct: 724  CAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITP 783

Query: 598  WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
              EHY C+VDLLGRA  L+E    +++M  +    +W ALLGACR+H N  + E  A+  
Sbjct: 784  TIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESS 843

Query: 658  LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
            L+LDP N   YV +S+++AA+  W    ++R  M   G+ K PG SWIE+G+K+H F+A 
Sbjct: 844  LKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAE 903

Query: 718  DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
            D+SH ES++IY +L ++T  ++ E GYV  T+ V+H+V+E EK   +  HSERLAIAYG+
Sbjct: 904  DRSHPESEKIYAELDKLTHAMKME-GYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGL 962

Query: 778  LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            + +  G+ IRI KNLRVC DCH+  K ++++  RE+V RD NRFHHF+ GVCSCGDYW
Sbjct: 963  ISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020



 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 181/606 (29%), Positives = 322/606 (53%), Gaps = 4/606 (0%)

Query: 41  RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV 100
           R ++    ++  G  V++  +  ++K C  +KDL  G ++H  +++       + VN+L+
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183

Query: 101 AMYAKCYDFRKARQLFDRMGEKEDVV-LWNSIISAYSASGQCLEALGLFREMQRVGLVTN 159
            MY +C    +ARQ+++++   E  V  WN+++  Y   G   EAL L REMQ+ GL   
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
             T +  L +C+  S    G EIH   +K+     V VAN ++ MYA+CG + EA  V  
Sbjct: 244 RATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFD 303

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
           ++E K  VSW  ++ G+        A + F+++Q  G  P+++  +N ++A      L  
Sbjct: 304 KMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKW 363

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GK +H++ +  G  SDL +G  L+ MYAKC       +VF ++  +D I+W T+I G A+
Sbjct: 364 GKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAE 423

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVI 398
                +A E++  +Q EG+  + +    +L AC     +   +EIH  +++ G + D+ +
Sbjct: 424 GGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISV 483

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            NA++ +Y +CG+I  +R +F  +  KD++SWT+MI     +GL  EAL +F  M +A +
Sbjct: 484 QNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGL 543

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           + + +T  S L+A SS + L  G+ ++  +I  G   +  VA++LV+MY+ CG++  A +
Sbjct: 544 KPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQ 603

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           VF+ +  +D++ + +MI     H  GK A+ LF +++ E   PD +T++ +L AC++SG 
Sbjct: 604 VFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGS 663

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           +   K+   ++  D  L       A LV    +     +A      M ++     W A++
Sbjct: 664 LEWAKEIHSLVLKDGYLSDTSLGNA-LVSTYAKCGSFSDALLVFDKM-MKRNVISWNAII 721

Query: 639 GACRVH 644
           G C  H
Sbjct: 722 GGCAQH 727



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/292 (19%), Positives = 128/292 (43%), Gaps = 12/292 (4%)

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
           + A+++   + +     +S   +  L     +  L  G+E++  II+    L+    ++L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 504 VDMYARCGALDIANKVFNCVQTKDLIL--WTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           ++MY +CG+++ A +V+N +   +  +  W +M+     +G  + A+ L  +M+    A 
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 562 DHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
              T + LL +C     +  G++  +E M+     D    +  C++++  +   + EA +
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVAN--CILNMYAKCGSIHEARE 300

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELG-EIVAKKLLELDPGNPGNYVLISNVFAASR 679
               M+ +     W  ++G      + E+  EI  K   E    N   Y+ + N F+   
Sbjct: 301 VFDKMETKSVVS-WTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPA 359

Query: 680 KWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
             K  + V   +  +G +     S + +G  +    A+  S+ +  ++++KL
Sbjct: 360 ALKWGKTVHSHILNAGHE-----SDLAVGTALVKMYAKCGSYKDCRQVFEKL 406


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 326/847 (38%), Positives = 503/847 (59%), Gaps = 33/847 (3%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
             R+  +W   L +   + +    + TY  M V G   D F FP V+KA + L+DL  G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 79  KIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           +IH   +K GY S+   V N+LV MY KC       ++FDR+ ++ D V WNS I+A   
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDR-DQVSWNSFIAALCR 171

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE---TLGMEIHAATVKSGQNLQ 194
             +  +AL  FR MQ   +  +++T V+   AC +        LG ++H  +++ G   +
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQ-K 230

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
            +  NAL+AMYA+ G++ ++  +     ++D VSWN+M++ F Q+D + +A+ FFR +  
Sbjct: 231 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVL 290

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVN 313
            G + D V   + + A   L  L  GKE+HAY ++    + +  +G+ L+DMY  C  V 
Sbjct: 291 EGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVE 350

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMAC 372
              RVF  +  +    W  +I+GYA+N    KAL LF   +++ GL  +   + SV+ AC
Sbjct: 351 SGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPAC 410

Query: 373 SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
              +  S  + IHGY ++ G   D  + NA++D+Y + G +D S  +F+S+E +D VSW 
Sbjct: 411 VHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWN 470

Query: 432 SMISSYVHNGLANEALELFYLMNE-----------------ANVESDSITLVSALSAASS 474
           +MI+ YV +G  + AL L + M                      + ++ITL++ L   ++
Sbjct: 471 TMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAA 530

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L+ + KGKE++ + IR     + +V S+LVDMYA+CG L+++ +VFN +  K++I W  +
Sbjct: 531 LAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVL 590

Query: 535 INANGLHGRGKVAIDLFYKMEAES-----FAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           I A G+HG+G+ A++LF  M AE+       P+ +TF+ +  ACSHSGLI+EG      M
Sbjct: 591 IMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRM 650

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE-PTAEVWCALLGACRVHSNKE 648
           + D+ ++P  +HYAC+VDLLGRA  LEEAY+ V +M  E      W +LLGACR+H N E
Sbjct: 651 KHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVE 710

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
           LGE+ AK LL L+P    +YVL+SN+++++  W    +VR  MR  G+KK PG SWIE  
Sbjct: 711 LGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFR 770

Query: 709 NKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHS 768
           +++H F+A D SH +S++++  L  ++EK+ +EG YV  T  VLHNV+E+EK  +L GHS
Sbjct: 771 DEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEG-YVPDTSCVLHNVDEDEKENLLCGHS 829

Query: 769 ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
           E+LAIA+G+L +  G+ IR+ KNLRVC DCH+  K +S++  RE++VRD  RFHHF+ G 
Sbjct: 830 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGT 889

Query: 829 CSCGDYW 835
           CSCGDYW
Sbjct: 890 CSCGDYW 896



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 181/626 (28%), Positives = 313/626 (50%), Gaps = 44/626 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + D  ++FD+++ R   +WN+ + A     +  + LE +  M++  + + +FT
Sbjct: 137 MYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFT 196

Query: 61  FPCVIKACA---MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              V  AC+   ++  L  G ++HG  L+ G D   F  N+L+AMYAK      ++ LF+
Sbjct: 197 LVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFE 255

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
              ++ D+V WN++IS++S S +  EAL  FR M   G+  +  T  + L AC       
Sbjct: 256 SFVDR-DMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 314

Query: 178 LGMEIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +G EIHA  +++   ++  +V +AL+ MY  C ++     V   +  +    WN+M++G+
Sbjct: 315 VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 374

Query: 237 VQNDLYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            +N L  KA+  F E+ + AG  P+     + + A        N + +H YA+K GF  D
Sbjct: 375 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKED 434

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ- 354
             + N LMDMY++   ++    +F  M  +D +SW T+I GY  +  +  AL L   +Q 
Sbjct: 435 RYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQR 494

Query: 355 LEGL----------------DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLV 397
           +E                    + + + +VL  C+ L  +++ KEIH Y IR  L SD+ 
Sbjct: 495 MENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDIT 554

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM---- 453
           + +A+VD+Y KCG ++ SR VF  + +K+V++W  +I +   +G   EALELF  M    
Sbjct: 555 VGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEA 614

Query: 454 -NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK---GFNLEGSVASSLVDMYAR 509
                 + + +T ++  +A S   ++ +G  LN F   K   G        + +VD+  R
Sbjct: 615 GRGGEAKPNEVTFITVFAACSHSGLISEG--LNLFYRMKHDHGVEPTSDHYACVVDLLGR 672

Query: 510 CGALDIANKVFNCVQTK--DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHI 564
            G L+ A ++ N +  +   +  W+S++ A  +H     G+VA      +E       H 
Sbjct: 673 AGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPN--VASHY 730

Query: 565 TFLALLYACSHSGLINEGKKFLEIMR 590
             L+ +Y  S +GL N+  +  + MR
Sbjct: 731 VLLSNIY--SSAGLWNKAMEVRKNMR 754


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 302/788 (38%), Positives = 485/788 (61%), Gaps = 3/788 (0%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M +LGI  + F FP V+KAC + KDL  G ++HG+V+  G+DS +F+ NSLV +YAKC  
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
           F  AR LFD + ++  VV WN++ S Y  S    EA+ LF +M   G+  N ++  + + 
Sbjct: 61  FGDARSLFDAIPDRS-VVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMIN 119

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
            C        G +IH   +K G +   + ANAL+ MYA+ G + +A+ V  ++   D VS
Sbjct: 120 VCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVS 179

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           WN+++ G V ++ + +A++  RE+  +G  P+     +A+ A   +     G++LH+  I
Sbjct: 180 WNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI 239

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K    SD  +G  L+DMY+KC  ++    VF  M  +D I+W  +I+G++QN    +A  
Sbjct: 240 KMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAAS 299

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYG 407
           LF  +  EG+  +   + +VL + + L+     ++IH   ++ G   D  ++N+++D YG
Sbjct: 300 LFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYG 359

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KCG+++ +  VFE     D+V +TS++++Y  +G   EAL L+  M +  ++ DS    S
Sbjct: 360 KCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSS 419

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            L+A +SLS  ++GK+++  I++ GF  +    +SLV+MYA+CG+++ A+  F+ +  + 
Sbjct: 420 LLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRG 479

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           ++ W++MI     HG GK A+ LF +M      P+HIT +++L AC+H+GL+ E K +  
Sbjct: 480 IVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFN 539

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
            M+  + ++P  EHYAC++DLLGRA  LE A + V  M  +  A VW ALLGA R+H N 
Sbjct: 540 SMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNI 599

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           +LGE  A+ LL L+P   G +VL++N++A+   W  V +VR  M+   +KK PG SW+E+
Sbjct: 600 DLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEV 659

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGH 767
            +K+++FI  D+SHS S EIY KL E+++ L ++ GYV   +  LH+VE  EK Q+LY H
Sbjct: 660 KDKVYTFIVGDRSHSRSTEIYAKLDELSDLL-KKAGYVPMVEIDLHDVERSEKEQLLYHH 718

Query: 768 SERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
           SE+LA+A+G++ +  G+ IR+ KNLR+C DCH+  K +S++  RE++VRD NRFHHF  G
Sbjct: 719 SEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREG 778

Query: 828 VCSCGDYW 835
            CSCG+YW
Sbjct: 779 SCSCGEYW 786



 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 178/578 (30%), Positives = 300/578 (51%), Gaps = 9/578 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG   DA  LFD +  R+V +WNA+   YV +      +  +  M + GI  + F+
Sbjct: 54  LYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFS 113

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I  C  L+D   G KIHG ++K GYDS  F  N+LV MYAK      A  +FD + 
Sbjct: 114 LSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA 173

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+V WN+II+          AL L REM + G+  N +T  +AL+AC   +   LG 
Sbjct: 174 -KPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGR 232

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H++ +K       ++   LI MY++C  M +A  V   +  +D ++WN++++G  QN+
Sbjct: 233 QLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNE 292

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F  +   G   +Q      + +   L      +++HA ++K GF  D  + N
Sbjct: 293 EDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVN 352

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+D Y KC  V    RVF +    D + +T+++  YAQ+    +AL L+  +Q  G+  
Sbjct: 353 SLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKP 412

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D  +  S+L AC+ L    Q K++H +I++ G +SD+   N++V++Y KCG+I+ +   F
Sbjct: 413 DSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAF 472

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I  + +VSW++MI     +G   EAL+LF  M +  V  + ITLVS L A +   ++ 
Sbjct: 473 SRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVA 532

Query: 480 KGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           + K   N   I  G        + ++D+  R G L+ A ++ N +  + + ++W +++ A
Sbjct: 533 EAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGA 592

Query: 538 NGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
             +H     G+ A ++   +E E  +  H+  LA +YA
Sbjct: 593 ARIHKNIDLGEQAAEMLLALEPEK-SGTHV-LLANIYA 628


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  617 bits (1590), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 318/837 (37%), Positives = 484/837 (57%), Gaps = 4/837 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MY KCGS+ DA+ +FDK+ +R V +W  M+G     G        + +M+  G   +++T
Sbjct: 263  MYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYT 322

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            +  ++ A A    L+   ++H   +  G      + N+LV MYAK      AR +FD M 
Sbjct: 323  YVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMT 382

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            E+ D+  W  +I   +  G+  EA  LF +MQR G + N  T+++ L A   +S   L  
Sbjct: 383  ER-DIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEW 441

Query: 181  E--IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
               +H    ++G    + + NALI MYA+CG + +A  V   + ++D +SWN+M+ G  Q
Sbjct: 442  VKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQ 501

Query: 239  NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            N    +A   F ++Q  G  PD    ++ ++  G    L    E+H +A++ G +SD ++
Sbjct: 502  NGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRV 561

Query: 299  GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            G+  + MY +C  ++    +F +++ +   +W  +I G AQ  C  +AL LF  +Q EG 
Sbjct: 562  GSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGF 621

Query: 359  DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNV 418
              D     ++L A    + +   KE+H +    GL DL + NA+V  Y KCGN+ Y++ V
Sbjct: 622  IPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQV 681

Query: 419  FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
            F+ +  ++V +WT MI     +G  ++A   F  M    +  D+ T VS LSA +S   L
Sbjct: 682  FDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGAL 741

Query: 479  KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            +  KE++   +  G   +  V ++LV MYA+CG++D A  VF+ +  +D+  WT MI   
Sbjct: 742  EWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGL 801

Query: 539  GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
              HGRG  A+D F KM++E F P+  +++A+L ACSH+GL++EG++    M  DY ++P 
Sbjct: 802  AQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPT 861

Query: 599  PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
             EHY C+VDLLGRA  LEEA  F+ +M IEP    W ALLGAC  + N E+ E  AK+ L
Sbjct: 862  MEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERL 921

Query: 659  ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
            +L P +   YVL+SN++AA+ KW+    VR  M+  G++K PG SWIE+ N+IHSF+  D
Sbjct: 922  KLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGD 981

Query: 719  KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
             SH ES EIY +L ++ E+L+ + GYV  T+ VL N ++E K Q L  HSE+LAI YG++
Sbjct: 982  TSHPESKEIYAQLNDLIERLKAK-GYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLM 1040

Query: 779  KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             +     IR+ KNLRVC DCH+  K +S++ GRE+V RDA RFHHF+ GVCSCGDYW
Sbjct: 1041 HTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097



 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 183/582 (31%), Positives = 300/582 (51%), Gaps = 5/582 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y +CG +  A Q+FDK+ ++ ++ W  M+G Y   G     +  Y +MR      +  T
Sbjct: 162 VYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEIT 221

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++KAC    +L  G KIH  +++ G+ S   +  +LV MY KC     A+ +FD+M 
Sbjct: 222 YLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMV 281

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +V+ W  +I   +  G+  EA  LF +MQR G + N+YT+V+ L A   +       
Sbjct: 282 ER-NVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVK 340

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H+  V +G  L + V NAL+ MYA+ G + +A  V   +  +D  SW  M+ G  Q+ 
Sbjct: 341 EVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHG 400

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSAS--GRLGNLLNGKELHAYAIKQGFVSDLQI 298
              +A   F ++Q  G  P+    ++ ++AS       L   K +H +A + GF+SDL+I
Sbjct: 401 RGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRI 460

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           GN L+ MYAKC  ++    VF  M  +D ISW  ++ G AQN C  +A  +F  +Q EGL
Sbjct: 461 GNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGL 520

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D     S+L        +    E+H + +  GL SD  + +A + +Y +CG+ID +R 
Sbjct: 521 VPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARL 580

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F+ +  + V +W +MI          EAL LF  M       D+ T ++ LSA      
Sbjct: 581 LFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEA 640

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L+  KE++      G  ++  V ++LV  Y++CG +  A +VF+ +  +++  WT MI  
Sbjct: 641 LEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGG 699

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
              HG G  A   F +M  E   PD  T++++L AC+ +G +
Sbjct: 700 LAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGAL 741



 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 156/523 (29%), Positives = 280/523 (53%), Gaps = 4/523 (0%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           GI++D+F++  +++ C   +D+    ++H  ++K G +   ++ N L+ +Y +C   + A
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCA 172

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           RQ+FD++  K+++ +W ++I  Y+  G   +A+ ++ +M++     N  T+++ L+AC  
Sbjct: 173 RQVFDKL-LKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCC 231

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
                 G +IHA  ++SG    V V  AL+ MY +CG + +A  +  ++  ++ +SW  M
Sbjct: 232 PVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVM 291

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           + G        +A   F ++Q  G  P+    V+ ++A+   G L   KE+H++A+  G 
Sbjct: 292 IGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGL 351

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
             DL++GN L+ MYAK   ++    VF  MT +D  SWT +I G AQ+    +A  LF  
Sbjct: 352 ALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQ 411

Query: 353 VQLEGLDADVMIIGSVL--MACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKC 409
           +Q  G   ++    S+L   A +    +   K +H +    G +SDL I NA++ +Y KC
Sbjct: 412 MQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKC 471

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G+ID +R VF+ +  +DV+SW +M+     NG  +EA  +F  M +  +  DS T +S L
Sbjct: 472 GSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLL 531

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           +   S   L+   E++   +  G   +  V S+ + MY RCG++D A  +F+ +  + + 
Sbjct: 532 NTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVT 591

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
            W +MI        G+ A+ LF +M+ E F PD  TF+ +L A
Sbjct: 592 TWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSA 634



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 230/431 (53%), Gaps = 3/431 (0%)

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           +A+ + +   + G+  +++++V  LQ C       L  ++H   +KSG    +YVAN L+
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
            +Y RCG++  A  V  +L  K+   W +M+ G+ +      AM+ + +++    +P+++
Sbjct: 161 RVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEI 220

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
             ++ + A     NL  GK++HA+ I+ GF SD+++   L++MY KC  +     +F +M
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM 280

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
             ++ ISWT +I G A      +A  LF  +Q EG   +     S+L A +    +   K
Sbjct: 281 VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVK 340

Query: 383 EIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
           E+H + +  GL+ DL + NA+V +Y K G+ID +R VF+ +  +D+ SWT MI     +G
Sbjct: 341 EVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHG 400

Query: 442 LANEALELFYLMNEANVESDSITLVSAL--SAASSLSILKKGKELNGFIIRKGFNLEGSV 499
              EA  LF  M       +  T +S L  SA +S S L+  K ++      GF  +  +
Sbjct: 401 RGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRI 460

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            ++L+ MYA+CG++D A  VF+ +  +D+I W +M+     +G G  A  +F +M+ E  
Sbjct: 461 GNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGL 520

Query: 560 APDHITFLALL 570
            PD  T+L+LL
Sbjct: 521 VPDSTTYLSLL 531



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 133/235 (56%), Gaps = 1/235 (0%)

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVD 404
           A+ + +    +G+  D     ++L  C   + +   K++H  II+ G+  +L + N ++ 
Sbjct: 102 AVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLR 161

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
           VY +CG +  +R VF+ +  K++  WT+MI  Y   G A +A+ ++  M +   + + IT
Sbjct: 162 VYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEIT 221

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
            +S L A      LK GK+++  II+ GF  +  V ++LV+MY +CG+++ A  +F+ + 
Sbjct: 222 YLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMV 281

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
            +++I WT MI     +GRG+ A  LF +M+ E F P+  T++++L A + +G +
Sbjct: 282 ERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGAL 336



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 137/299 (45%), Gaps = 11/299 (3%)

Query: 438 VHNGL-ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
            HN + A +A+ +  +  +  +  DS + V+ L        +   K+++  II+ G    
Sbjct: 93  THNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQN 152

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             VA+ L+ +Y RCG L  A +VF+ +  K++ +WT+MI     +G  + A+ ++ KM  
Sbjct: 153 LYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQ 212

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
           E   P+ IT+L++L AC     +  GKK    I++  +Q D   E    LV++  +   +
Sbjct: 213 ECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE--TALVNMYVKCGSI 270

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSN-KELGEIVAKKLLELDPGNPGNYVLISNV 674
           E+A Q +    +E     W  ++G    +   +E   +  +   E    N   YV I N 
Sbjct: 271 EDA-QLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNA 329

Query: 675 FAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
            A++   + V++V      +GL        + +GN +    A+  S  ++  ++  + E
Sbjct: 330 NASAGALEWVKEVHSHAVNAGLALD-----LRVGNALVHMYAKSGSIDDARVVFDGMTE 383


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 315/814 (38%), Positives = 502/814 (61%), Gaps = 5/814 (0%)

Query: 23  VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHG 82
           V+ WN+++ A   NG     L  YS  + + +  D +TFP VI ACA L D +    IH 
Sbjct: 80  VYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHD 139

Query: 83  LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCL 142
            VL  G+ S  +I N+L+ MY +  D  KAR++F+ M  + DVV WNS+IS Y+A+G   
Sbjct: 140 RVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSLISGYNANGYWN 198

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           EAL ++   + +G+V ++YT  + L+AC        G  IH    K G    V V N L+
Sbjct: 199 EALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLL 258

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
           +MY +   + +   +  ++  +D+VSWN+M+ G+ Q  LY ++++ F E+     KPD +
Sbjct: 259 SMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLL 317

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
              + + A G LG+L  GK +H Y I  G+  D    N L++MYAKC  +     VF  M
Sbjct: 318 TITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM 377

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
             +D +SW ++I  Y QN    +A++LF+ ++ + +  D +    +L   + L  +   K
Sbjct: 378 KCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGK 436

Query: 383 EIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
           E+H  + + G  S++V+ N +VD+Y KCG +  S  VFE+++++D+++W ++I+S VH+ 
Sbjct: 437 ELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSE 496

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
             N  L +   M    V  D  T++S L   S L+  ++GKE++G I + G   +  V +
Sbjct: 497 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 556

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
            L++MY++CG+L  + +VF  ++TKD++ WT++I+A G++G GK A+  F +MEA    P
Sbjct: 557 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 616

Query: 562 DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
           DH+ F+A+++ACSHSGL+ EG  +   M+ DY+++P  EHYAC+VDLL R+  L++A  F
Sbjct: 617 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 676

Query: 622 VRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKW 681
           + SM ++P + +W ALL ACR+  + E+ E V+++++EL+P + G YVL+SN++AA  KW
Sbjct: 677 ILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKW 736

Query: 682 KDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLERE 741
             V  +R  ++  GLKK PG SW+EI NK++ F    K   + +E+ K L  +   + +E
Sbjct: 737 DQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKE 796

Query: 742 GGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSF 801
            GY+A  QFVLH+++E+EK  +L GHSERLAIA+G+L +  G+ +++ KNLRVC DCH+ 
Sbjct: 797 -GYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTV 855

Query: 802 CKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            K +S++  REL+VRDANRFH F+ G CSCGDYW
Sbjct: 856 TKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  298 bits (763), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 189/553 (34%), Positives = 305/553 (55%), Gaps = 12/553 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +   +  A ++F+++  R V +WN+++  Y +NG     LE Y R R LG+  D++T
Sbjct: 159 MYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYT 218

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++AC  L  ++ G  IHGL+ K G      + N L++MY K       R++FD+M 
Sbjct: 219 MSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMV 278

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V WN++I  YS  G   E++ LF EM       +  T  + LQAC        G 
Sbjct: 279 LR-DAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGK 336

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   + SG       +N LI MYA+CG +  +  V   ++ KDSVSWNSM+  ++QN 
Sbjct: 337 YVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNG 396

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +AM+ F+ ++    KPD V  V  +S S +LG+L  GKELH    K GF S++ + N
Sbjct: 397 SFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSN 455

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN-NCHLKALELFRTVQLEGLD 359
           TL+DMYAKC  +    +VF  M A+D I+W TIIA    + +C+L  L +   ++ EG+ 
Sbjct: 456 TLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL-GLRMISRMRTEGVT 514

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D+  + S+L  CS L    Q KEIHG I + GL SD+ + N ++++Y KCG++  S  V
Sbjct: 515 PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQV 574

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +++KDVV+WT++IS+    G   +A+  F  M  A +  D +  V+ + A S   ++
Sbjct: 575 FKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 634

Query: 479 KKGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSM 534
           ++G  LN F  ++K + +E  +   + +VD+ +R   LD A      +  K D  +W ++
Sbjct: 635 EEG--LNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGAL 692

Query: 535 INANGLHGRGKVA 547
           ++A  + G  ++A
Sbjct: 693 LSACRMSGDTEIA 705



 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 196/650 (30%), Positives = 329/650 (50%), Gaps = 31/650 (4%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN 97
           + LRVL   SR  +         F  + +A A         K+H L++  G   +     
Sbjct: 2   KTLRVLHECSRQTL---------FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSA 52

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
            L+A YA   D   +  +F       +V LWNSII A + +G   EAL L+ E QR+ L 
Sbjct: 53  KLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQ 112

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            + YTF + + AC       +   IH   +  G    +Y+ NALI MY R   + +A  V
Sbjct: 113 PDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKV 172

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++  +D VSWNS+++G+  N  + +A++ +   +  G  PD     + + A G LG++
Sbjct: 173 FEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSV 232

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G  +H    K G   D+ + N L+ MY K   +    R+F +M  +D +SW T+I GY
Sbjct: 233 EEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGY 292

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
           +Q   + ++++LF  + +     D++ I S+L AC  L  +   K +H Y+I  G   D 
Sbjct: 293 SQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDT 351

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
              N ++++Y KCGN+  S+ VF  ++ KD VSW SMI+ Y+ NG  +EA++LF +M + 
Sbjct: 352 TASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM-KT 410

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           +V+ DS+T V  LS ++ L  L  GKEL+  + + GFN    V+++LVDMYA+CG +  +
Sbjct: 411 DVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDS 470

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRG-KVAIDLFYKMEAESFAPDHITFLALLYACSH 575
            KVF  ++ +D+I W ++I A+ +H     + + +  +M  E   PD  T L++L  CS 
Sbjct: 471 LKVFENMKARDIITWNTII-ASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSL 529

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYA--CLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
                +GK   EI  C ++L    +      L+++  +   L  ++Q  + M+ +     
Sbjct: 530 LAAKRQGK---EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVV-T 585

Query: 634 WCALLGACRVHSN-----KELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
           W AL+ AC ++       +  GE+ A  ++      P +   ++ +FA S
Sbjct: 586 WTALISACGMYGEGKKAVRAFGEMEAAGIV------PDHVAFVAIIFACS 629


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 315/814 (38%), Positives = 502/814 (61%), Gaps = 5/814 (0%)

Query: 23  VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHG 82
           V+ WN+++ A   NG     L  YS  + + +  D +TFP VI ACA L D +    IH 
Sbjct: 139 VYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHD 198

Query: 83  LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCL 142
            VL  G+ S  +I N+L+ MY +  D  KAR++F+ M  + DVV WNS+IS Y+A+G   
Sbjct: 199 RVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSLISGYNANGYWN 257

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           EAL ++   + +G+V ++YT  + L+AC        G  IH    K G    V V N L+
Sbjct: 258 EALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLL 317

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
           +MY +   + +   +  ++  +D+VSWN+M+ G+ Q  LY ++++ F E+     KPD +
Sbjct: 318 SMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF-KPDLL 376

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
              + + A G LG+L  GK +H Y I  G+  D    N L++MYAKC  +     VF  M
Sbjct: 377 TITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM 436

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
             +D +SW ++I  Y QN    +A++LF+ ++ + +  D +    +L   + L  +   K
Sbjct: 437 KCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLGK 495

Query: 383 EIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
           E+H  + + G  S++V+ N +VD+Y KCG +  S  VFE+++++D+++W ++I+S VH+ 
Sbjct: 496 ELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSE 555

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
             N  L +   M    V  D  T++S L   S L+  ++GKE++G I + G   +  V +
Sbjct: 556 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 615

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
            L++MY++CG+L  + +VF  ++TKD++ WT++I+A G++G GK A+  F +MEA    P
Sbjct: 616 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 675

Query: 562 DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
           DH+ F+A+++ACSHSGL+ EG  +   M+ DY+++P  EHYAC+VDLL R+  L++A  F
Sbjct: 676 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 735

Query: 622 VRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKW 681
           + SM ++P + +W ALL ACR+  + E+ + V+++++EL+P + G YVL+SNV+AA  KW
Sbjct: 736 ILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKW 795

Query: 682 KDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLERE 741
             V  +R  ++  GLKK PG SW+EI NK++ F    K   + +E+ K L  +   + +E
Sbjct: 796 DQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKE 855

Query: 742 GGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSF 801
            GY+A  QFVLH+++E+EK  +L GHSERLAIA+G+L +  G+ +++ KNLRVC DCH+ 
Sbjct: 856 -GYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTV 914

Query: 802 CKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            K +S++  REL+VRDANRFH F+ G CSCGDYW
Sbjct: 915 TKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 189/553 (34%), Positives = 305/553 (55%), Gaps = 12/553 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +   +  A ++F+++  R V +WN+++  Y +NG     LE Y R R LG+  D++T
Sbjct: 218 MYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYT 277

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++AC  L  ++ G  IHGL+ K G      + N L++MY K       R++FD+M 
Sbjct: 278 MSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMV 337

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V WN++I  YS  G   E++ LF EM       +  T  + LQAC        G 
Sbjct: 338 LR-DAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGK 395

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   + SG       +N LI MYA+CG +  +  V   ++ KDSVSWNSM+  ++QN 
Sbjct: 396 YVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNG 455

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +AM+ F+ ++    KPD V  V  +S S +LG+L  GKELH    K GF S++ + N
Sbjct: 456 SFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSN 514

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN-NCHLKALELFRTVQLEGLD 359
           TL+DMYAKC  +    +VF  M A+D I+W TIIA    + +C+L  L +   ++ EG+ 
Sbjct: 515 TLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL-GLRMISRMRTEGVT 573

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D+  + S+L  CS L    Q KEIHG I + GL SD+ + N ++++Y KCG++  S  V
Sbjct: 574 PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQV 633

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +++KDVV+WT++IS+    G   +A+  F  M  A +  D +  V+ + A S   ++
Sbjct: 634 FKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 693

Query: 479 KKGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSM 534
           ++G  LN F  ++K + +E  +   + +VD+ +R   LD A      +  K D  +W ++
Sbjct: 694 EEG--LNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGAL 751

Query: 535 INANGLHGRGKVA 547
           ++A  + G  ++A
Sbjct: 752 LSACRMSGDTEIA 764



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 197/655 (30%), Positives = 331/655 (50%), Gaps = 25/655 (3%)

Query: 33  YVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDST 92
           Y S     RV++T   +RVL        F  + +A A         K+H L++  G   +
Sbjct: 50  YTSTKLFSRVMKT---LRVLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHS 106

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
                 L+A YA   D   +  +F       +V  WNSII A + +G   EAL L+ E Q
Sbjct: 107 VIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQ 166

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
           R+ L  + YTF + + AC       +   IH   +  G    +Y+ NALI MY R   + 
Sbjct: 167 RIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLD 226

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
           +A  V  ++  +D VSWNS+++G+  N  + +A++ +   +  G  PD     + + A G
Sbjct: 227 KARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACG 286

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
            LG++  G  +H    K G   D+ + N L+ MY K   +    R+F +M  +D +SW T
Sbjct: 287 GLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNT 346

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           +I GY+Q   + ++++LF  + +     D++ I S+L AC  L  +   K +H Y+I  G
Sbjct: 347 MICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 405

Query: 393 LS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
              D    N ++++Y KCGN+  S+ VF  ++ KD VSW SMI+ Y+ NG  +EA++LF 
Sbjct: 406 YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK 465

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           +M + +V+ DS+T V  LS ++ L  L  GKEL+  + + GFN    V+++LVDMYA+CG
Sbjct: 466 MM-KTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCG 524

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRG-KVAIDLFYKMEAESFAPDHITFLALL 570
            +  + KVF  ++ +D+I W ++I A+ +H     + + +  +M  E   PD  T L++L
Sbjct: 525 EMGDSLKVFENMKARDIITWNTII-ASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSIL 583

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA--CLVDLLGRANHLEEAYQFVRSMQIE 628
             CS      +GK   EI  C ++L    +      L+++  +   L  ++Q  + M+ +
Sbjct: 584 PVCSLLAAKRQGK---EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK 640

Query: 629 PTAEVWCALLGACRVHSN-----KELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
                W AL+ AC ++       +  GE+ A  ++      P +   ++ +FA S
Sbjct: 641 DVV-TWTALISACGMYGEGKKAVRAFGEMEAAGIV------PDHVAFVAIIFACS 688


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 315/836 (37%), Positives = 502/836 (60%), Gaps = 6/836 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           Y +    + +  +F  +S    V+ WN+++ A   NG   + L  Y+ MR   +  DAFT
Sbjct: 64  YAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFT 123

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP VI +CA + DL+ G  +H   ++ G++S  +I N+L+ MY++  D   AR +F+ M 
Sbjct: 124 FPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMS 183

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V WNS+IS Y ++G   +AL ++ + +  G+V + +T  + L AC        G+
Sbjct: 184 NR-DSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGV 242

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    K G    V + N L++MY +  ++ EA  V  ++  KDSV+WN+M+ G+ Q  
Sbjct: 243 AVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLG 302

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  +++ F ++   G  PD +   + + A G+ G+L  GK +H Y I  GF  D    N
Sbjct: 303 RHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACN 361

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  +     VF     +D ++W ++I GY Q+  + + LE F+ +++E    
Sbjct: 362 ILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPD 421

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
            V  +  +L   S L  ++Q + IH  +I+ G  ++L+I N+++DVY KCG +D    VF
Sbjct: 422 SVTFV-LLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVF 480

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             + + D++SW ++I+S VH        ++   M    +  D  T++  L   S L++ +
Sbjct: 481 SYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRR 540

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GKE++G+I + GF     + ++L++MY++CG+L+   KVF  ++ KD++ WT++I+A G
Sbjct: 541 QGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFG 600

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           ++G GK A+  F  ME     PD + F+A ++ACSHSG++ EG +F + M+ DY L+P  
Sbjct: 601 MYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRM 660

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC+VDLL R+  L +A +F+ SM ++P A +W ALL ACR   N  + + V+KK+LE
Sbjct: 661 EHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILE 720

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+  + G YVL+SN++A   KW  V+ VR  M+  GLKK PGSSWIEI  +++ F   DK
Sbjct: 721 LNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDK 780

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           S  + D++ K L E   +L  + GYVA  QF LH+VEE++K  ML GHSERLAIA+G+L 
Sbjct: 781 SFEQYDKV-KDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLN 839

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +  GS + + KNLRVC DCH+  K ++++  RE++VRDANRFH F+ G CSCGD+W
Sbjct: 840 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895



 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 179/552 (32%), Positives = 302/552 (54%), Gaps = 10/552 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +   + +A  +F+++S R   +WN+++  Y SNG     L+ Y + R+ G+  D FT
Sbjct: 165 MYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFT 224

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  L  +  G  +HG++ K G      I N L++MY K    R+AR++F +M 
Sbjct: 225 MSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMA 284

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V WN++I  Y+  G+   ++ LF +M   G V +  +  + ++AC  S    +G 
Sbjct: 285 VK-DSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGK 342

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   + SG        N LI MYA+CG +  A  V    + KDSV+WNS++ G+ Q+ 
Sbjct: 343 FVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSG 402

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            Y + ++ F+ ++   +KPD V  V  +S   +L ++  G+ +H   IK GF ++L IGN
Sbjct: 403 YYKEGLESFKMMK-MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGN 461

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+D+YAKC  ++ + +VF  M+A D ISW T+IA     +      ++   ++ EGL  
Sbjct: 462 SLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMP 521

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D   +  +L  CS L    Q KEIHGYI + G  S++ I NA++++Y KCG+++    VF
Sbjct: 522 DEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVF 581

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + ++ KDVV+WT++IS++   G   +AL+ F  M  + V  DS+  ++ + A S   ++K
Sbjct: 582 KYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVK 641

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANK-VFNCVQTKDLILWTSMI 535
           +G  L  F  ++  +NLE  +   + +VD+ AR G L  A + + +     D  LW +++
Sbjct: 642 EG--LRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALL 699

Query: 536 NANGLHGRGKVA 547
           +A    G   +A
Sbjct: 700 SACRARGNTNIA 711



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 183/617 (29%), Positives = 315/617 (51%), Gaps = 10/617 (1%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +H L++  G   +      L++ YA+  D   +  +F  +    +V LWNSII A + +G
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
              +ALG + EM+   L  +A+TF + + +C       LG  +H   ++ G    +Y+ N
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGN 160

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP 259
           ALI MY+R   +  A  V  ++ N+DSVSWNS+++G+  N  +  A+  + + +  G  P
Sbjct: 161 ALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVP 220

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D     + + A G L  +  G  +H    K G   D+ IGN L+ MY K   +    RVF
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF 280

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
            +M  +D ++W T+I GYAQ   H  +++LF  + ++G   D++ I S + AC     + 
Sbjct: 281 SKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQ 339

Query: 380 QTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             K +H Y+I  G   D V  N ++D+Y KCG++  ++ VF++ + KD V+W S+I+ Y 
Sbjct: 340 VGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYT 399

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            +G   E LE F +M +   + DS+T V  LS  S L+ + +G+ ++  +I+ GF  E  
Sbjct: 400 QSGYYKEGLESFKMM-KMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELI 458

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           + +SL+D+YA+CG +D   KVF+ +   D+I W ++I ++       V   +  +M  E 
Sbjct: 459 IGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEG 518

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
             PD  T L +L  CS   +  +GK+    I +  ++ +  P   A L+++  +   LE 
Sbjct: 519 LMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNV-PIGNA-LIEMYSKCGSLEN 576

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
             +  + M+ E     W AL+ A  ++   +   + A + +EL    P +   I+ +FA 
Sbjct: 577 CIKVFKYMK-EKDVVTWTALISAFGMYGEGKKA-LKAFQDMELSGVLPDSVAFIAFIFAC 634

Query: 678 SRKWKDVEQVRM--RMR 692
           S      E +R   RM+
Sbjct: 635 SHSGMVKEGLRFFDRMK 651



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 2/218 (0%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVFESI-ES 424
           S+L   S  K   Q + +H  II  GLS  VI +  ++  Y +  +   S +VF SI  +
Sbjct: 24  SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
            +V  W S+I +  HNGL  +AL  +  M E  ++ D+ T  S +++ + +  L+ G  +
Sbjct: 84  NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +   +  GF  +  + ++L+DMY+R   LD A  VF  +  +D + W S+I+    +G  
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           + A+D+++K       PD  T  ++L AC     + EG
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 329/840 (39%), Positives = 493/840 (58%), Gaps = 8/840 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MY  CGS LD+  +FD +  + +  WNA++  Y  NG    V++ +  +        D F
Sbjct: 88  MYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNF 147

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP VIKAC  + D+  G  IHG+V+K G     F+ N+LV MY KC    +A ++FD M
Sbjct: 148 TFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFM 207

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETL 178
            E  ++V WNS+I A+S +G   ++  L  EM    GL+ +  T V  L  C       +
Sbjct: 208 PET-NLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDI 266

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           GM IH   VK G + +V V NA++ MY++CG + EA     +  NK+ VSWN+M++ F  
Sbjct: 267 GMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSL 326

Query: 239 NDLYCKAMQFFRELQGAGQ--KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
                +A    +E+Q  G+  K ++V  +N + A      L + KELH Y+ +  F   +
Sbjct: 327 EGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF-QHV 385

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
           ++ N  +  YAKC  +N   +VF+ +  +   SW  +I G+AQN    KAL L   +   
Sbjct: 386 ELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYS 445

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
           G   D   I S+L+AC+ LK +   KEIHGY++R GL +D  +  +++  Y  CG    +
Sbjct: 446 GQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSA 505

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           R +F+ ++ K++VSW +MIS Y  NGL  E+L LF       ++S  I +VS   A S L
Sbjct: 506 RVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQL 565

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           S L+ GKE +G++++     +  V  S++DMYA+ G +  + KVF+ ++ K++  W ++I
Sbjct: 566 SALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAII 625

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
            A+G+HG GK AI+L+ +M+     PD  T++ +L AC H+GL+ EG K+ + M+    +
Sbjct: 626 VAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLI 685

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           +P  EHYACL+D+L RA  L++A + V  M  E    +W +LL +CR     E+GE VAK
Sbjct: 686 EPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAK 745

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           KLLEL+P    NYVL+SN++A   KW  V +VR  M+  GL+K  G SWIE+G +++SF+
Sbjct: 746 KLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFV 805

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
             D    +S EI      + E++  E GY   T  VLH V EEEK+ +L GHSE+LAI++
Sbjct: 806 VGDSLQPKSAEIRVIWRRLEERIS-EIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISF 864

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G+LK+T+G+ +RI KNLR+C DCH+  KL+S+   RE+VVRD  RFHHF  G+CSC DYW
Sbjct: 865 GLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 223/425 (52%), Gaps = 7/425 (1%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANA-LIAMYARCGKMTEAAGVLYQLENKD 225
           LQAC +      G  +H     S      YV N  LI MYA CG   ++  V   +E K+
Sbjct: 50  LQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKN 109

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
            + WN++++G+ +N LY   ++ F +L      +PD     + + A G + ++  G+ +H
Sbjct: 110 LIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIH 169

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
              IK G V D+ +GN L+ MY KC  V+   +VF  M   + +SW ++I  +++N    
Sbjct: 170 GMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSR 229

Query: 345 KALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAI 402
            + +L    +  EGL  DV+ + ++L  C+G   +     IHG  ++ GLS+ V++ NA+
Sbjct: 230 DSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAM 289

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM--NEANVES 460
           V +Y KCG ++ ++  F    +K+VVSW +MIS++   G  NEA  L   M      +++
Sbjct: 290 VYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKA 349

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           + +T+++ L A      L+  KEL+G+  R  F     ++++ +  YA+CGAL+ A KVF
Sbjct: 350 NEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVF 408

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
           + +  K +  W ++I  +  +G  + A+ L ++M      PD  T  +LL AC+H   + 
Sbjct: 409 HGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQ 468

Query: 581 EGKKF 585
            GK+ 
Sbjct: 469 YGKEI 473



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 126/222 (56%), Gaps = 4/222 (1%)

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
           IG +L AC   K +   + +H ++       +D V+   ++ +Y  CG+   SR VF+++
Sbjct: 46  IGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNM 105

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKG 481
           E+K+++ W +++S Y  NGL  + +++F  L+++ + + D+ T  S + A   +  ++ G
Sbjct: 106 ETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLG 165

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           + ++G +I+ G  L+  V ++LV MY +CGA+D A KVF+ +   +L+ W SMI A   +
Sbjct: 166 EVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSEN 225

Query: 542 GRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSGLINEG 582
           G  + + DL  +M  E    PD +T + +L  C+  G ++ G
Sbjct: 226 GFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIG 267


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 318/832 (38%), Positives = 510/832 (61%), Gaps = 28/832 (3%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           W  +L + V +      + TY  M VLGI  D F FP ++KA A L+D+D G +IH  V 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 86  KCGY--DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE 143
           K GY  DS   + N+LV +Y KC DF    ++FDR+ E+  V  WNS+IS+  +  +   
Sbjct: 121 KFGYGVDSVT-VANTLVNLYRKCGDFGAVYKVFDRISERNQVS-WNSLISSLCSFEKWEM 178

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFET---LGMEIHAATVKSGQNLQVYVANA 200
           AL  FR M    +  +++T V+   AC +        +G ++HA  ++ G+ L  ++ N 
Sbjct: 179 ALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGE-LNSFIINT 237

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           L+AMY + GK+  +  +L   E +D V+WN++L+   QN+ + +A+++ RE+   G +PD
Sbjct: 238 LVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPD 297

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ-IGNTLMDMYAKCCCVNYMGRVF 319
                + + A   L  L  GKELHAYA+K G + +   +G+ L+DMY  C  V    RVF
Sbjct: 298 GFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVF 357

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE---GLDADVMIIGSVLMACSGLK 376
             M  +    W  +I GYAQN    +AL LF  +++E   GL A+   +  V+ AC    
Sbjct: 358 DGMFDRKIGLWNAMITGYAQNEYDEEALLLF--IEMEESAGLLANSTTMAGVVPACVRSG 415

Query: 377 CMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
             S+ + IHG+++++GL  D  + NA++D+Y + G ID ++ +F  +E +D+V+W ++I+
Sbjct: 416 AFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIIT 475

Query: 436 SYVHNGLANEALELFYLM-----------NEANVESDSITLVSALSAASSLSILKKGKEL 484
            YV +    +AL + + M           +  +++ +SITL++ L + ++LS L KGKE+
Sbjct: 476 GYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEI 535

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           + + I+     + +V S+LVDMYA+CG L ++ KVF+ +  +++I W  ++ A G+HG  
Sbjct: 536 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNS 595

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC 604
           + AID+   M  +   P+ +TF+++  ACSHSG++NEG K    M+ DY ++P  +HYAC
Sbjct: 596 QDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYAC 655

Query: 605 LVDLLGRANHLEEAYQFVRSMQIE-PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           +VDLLGRA  ++EAYQ +  +      A  W +LLGACR+H+N E+GEI A+ L++L+P 
Sbjct: 656 VVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPN 715

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
              +YVL++N+++++  W    +VR  M+  G++K PG SWIE G+++H F+A D SH +
Sbjct: 716 VASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 775

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
           S+++   L  + E++ +E GY+  T  VLHNVEE+EK  +L GHSE+LAIA+G+L ++ G
Sbjct: 776 SEKLRGYLETLWERMRKE-GYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPG 834

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++IR+ KNLRVC DCH   K +S++  RE+++RD  RFHHF+ G CSCGDYW
Sbjct: 835 TIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 304/598 (50%), Gaps = 29/598 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG      ++FD++S+R   +WN+++ +  S  +    LE +  M    +   +FT
Sbjct: 138 LYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFT 197

Query: 61  FPCVIKACA---MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              V  AC+   M + L  G ++H   L+ G +   FI+N+LVAMY K      ++ L  
Sbjct: 198 LVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLG 256

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
              E  D+V WN+++S+   + Q LEAL   REM   G+  + +T  + L AC       
Sbjct: 257 SF-EGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLR 315

Query: 178 LGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            G E+HA  +K+G  +   +V +AL+ MY  C ++     V   + ++    WN+M+TG+
Sbjct: 316 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGY 375

Query: 237 VQNDLYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            QN+   +A+  F E+ + AG   +       V A  R G     + +H + +K+G   D
Sbjct: 376 AQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRD 435

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             + N LMDMY++   ++   R+F +M  +D ++W TII GY  +  H  AL +   +Q+
Sbjct: 436 RFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQI 495

Query: 356 -----------EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIV 403
                        L  + + + ++L +C+ L  +++ KEIH Y I+  L +D+ + +A+V
Sbjct: 496 LERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 555

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y KCG +  SR VF+ I  ++V++W  ++ +Y  +G + +A+++  +M    V+ + +
Sbjct: 556 DMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEV 615

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFN 521
           T +S  +A S   ++ +G ++  + ++K + +E S    + +VD+  R G +  A ++ N
Sbjct: 616 TFISVFAACSHSGMVNEGLKI-FYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLIN 674

Query: 522 CVQTK--DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            +         W+S++ A  +H     G++A     ++E       H   LA +Y+ +
Sbjct: 675 LIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPN--VASHYVLLANIYSSA 730


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  613 bits (1581), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 318/841 (37%), Positives = 499/841 (59%), Gaps = 8/841 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY-SRMRVLGISVDAF 59
           MY  CGS  D+  +FD   ++ +F +NA+L  Y  N      +  +   +    ++ D F
Sbjct: 137 MYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNF 196

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T PCV KACA + D++ G  +H L LK G  S  F+ N+L+AMY KC     A ++F+ M
Sbjct: 197 TLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETM 256

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREM---QRVGLVTNAYTFVAALQACEDSSFE 176
               ++V WNS++ A S +G   E  G+F+ +   +  GLV +  T V  + AC      
Sbjct: 257 -RNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEV 315

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            +GM +H    K G   +V V N+L+ MY++CG + EA  +      K+ VSWN+++ G+
Sbjct: 316 RMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGY 375

Query: 237 VQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            +   +    +  +E+Q   + + ++V  +N + A      LL+ KE+H YA + GF+ D
Sbjct: 376 SKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKD 435

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             + N  +  YAKC  ++   RVF  M  +   SW  +I  +AQN    K+L+LF  +  
Sbjct: 436 ELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMD 495

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
            G+D D   IGS+L+AC+ LK +   KEIHG+++R GL  D  I  +++ +Y +C ++  
Sbjct: 496 SGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLL 555

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
            + +F+ +E+K +V W  MI+ +  N L  EAL+ F  M    ++   I +   L A S 
Sbjct: 556 GKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQ 615

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           +S L+ GKE++ F ++   + +  V  +L+DMYA+CG ++ +  +F+ V  KD  +W  +
Sbjct: 616 VSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVI 675

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I   G+HG G  AI+LF  M+ +   PD  TFL +L AC+H+GL+ EG K+L  M+  Y 
Sbjct: 676 IAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYG 735

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  EHYAC+VD+LGRA  L EA + V  M  EP + +W +LL +CR + + E+GE V+
Sbjct: 736 VKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVS 795

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           KKLLEL+P    NYVL+SN++A   KW +V +VR RM+ +GL K  G SWIEIG  ++ F
Sbjct: 796 KKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRF 855

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           +  D S SES +I +   ++ +K+ +  GY   T  VLH +EEE K+++L  HSE+LAI+
Sbjct: 856 LVSDGSLSESKKIQQTWIKLEKKISKI-GYKPDTSCVLHELEEEGKIKILKSHSEKLAIS 914

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G+L + +G+ +R+ KNLR+CVDCH+  KLVS++  R+++VRD  RFHHF+ G+C+CGD+
Sbjct: 915 FGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDF 974

Query: 835 W 835
           W
Sbjct: 975 W 975



 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 180/624 (28%), Positives = 315/624 (50%), Gaps = 19/624 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-LVAMYAKCYDFRKARQLFDRMGEK 122
           +++AC   K++  G K+H LV        D ++++ ++AMY+ C     +R +FD   EK
Sbjct: 98  LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFRE-MQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            D+ L+N+++S YS +    +A+ LF E +    L  + +T     +AC   +   LG  
Sbjct: 158 -DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEA 216

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  +K+G     +V NALIAMY +CG +  A  V   + N++ VSWNS++    +N  
Sbjct: 217 VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGG 276

Query: 242 YCKAMQFFREL---QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           + +    F+ L   +  G  PD    V  + A   +G +  G  +H  A K G   ++ +
Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTV 336

Query: 299 GNTLMDMYAKCCCVNYMG--RVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            N+L+DMY+KC    Y+G  R  + M   ++ +SW TII GY++        EL + +Q 
Sbjct: 337 NNSLVDMYSKC---GYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQR 393

Query: 356 -EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNID 413
            E +  + + + +VL ACSG   +   KEIHGY  R G L D ++ NA V  Y KC ++D
Sbjct: 394 EEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLD 453

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  VF  +E K V SW ++I ++  NG   ++L+LF +M ++ ++ D  T+ S L A +
Sbjct: 454 CAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACA 513

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            L  L+ GKE++GF++R G  L+  +  SL+ +Y +C ++ +   +F+ ++ K L+ W  
Sbjct: 514 RLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNV 573

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRCD 592
           MI     +     A+D F +M +    P  I    +L ACS    +  GK+     ++  
Sbjct: 574 MITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAH 633

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
              D +      L+D+  +   +E++      +  E    VW  ++    +H +  L  I
Sbjct: 634 LSEDAFVT--CALIDMYAKCGCMEQSQNIFDRVN-EKDEAVWNVIIAGYGIHGHG-LKAI 689

Query: 653 VAKKLLELDPGNPGNYVLISNVFA 676
              +L++   G P ++  +  + A
Sbjct: 690 ELFELMQNKGGRPDSFTFLGVLIA 713



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 241/474 (50%), Gaps = 14/474 (2%)

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAA----LQACEDSSFETLGMEIHAATVKSGQNL 193
           SG   +AL L     + G V+++     A    L+AC       +G ++HA  V +   L
Sbjct: 66  SGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHA-LVSASHKL 124

Query: 194 Q--VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
           +  V ++  +IAMY+ CG  +++ GV    + KD   +N++L+G+ +N L+  A+  F E
Sbjct: 125 RNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLE 184

Query: 252 LQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           L  A    PD         A   + ++  G+ +HA A+K G  SD  +GN L+ MY KC 
Sbjct: 185 LLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCG 244

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL---EGLDADVMIIGS 367
            V    +VF  M  ++ +SW +++   ++N    +   +F+ + +   EGL  DV  + +
Sbjct: 245 FVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVT 304

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKD 426
           V+ AC+ +  +     +HG   + G+++ V + N++VD+Y KCG +  +R +F+    K+
Sbjct: 305 VIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKN 364

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMN-EANVESDSITLVSALSAASSLSILKKGKELN 485
           VVSW ++I  Y   G      EL   M  E  V  + +T+++ L A S    L   KE++
Sbjct: 365 VVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIH 424

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
           G+  R GF  +  VA++ V  YA+C +LD A +VF  ++ K +  W ++I A+  +G   
Sbjct: 425 GYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPG 484

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM-RCDYQLDPW 598
            ++DLF  M      PD  T  +LL AC+    +  GK+    M R   +LD +
Sbjct: 485 KSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEF 538


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 302/838 (36%), Positives = 504/838 (60%), Gaps = 5/838 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVS--QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY +CGS+ +A Q++ K+S  +RTV +WNAM+  Y+  G   + L+   +M+  G++ D 
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            T    + +C     L+ G +IH   ++ G      + N ++ MYAKC    +AR++FD+
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M EK+ VV W   I  Y+  G+   A  +F++M++ G+V N  T+++ L A    +    
Sbjct: 187 M-EKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKW 245

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  +H+  + +G      V  AL+ MYA+CG   +   V  +L N+D ++WN+M+ G  +
Sbjct: 246 GKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAE 305

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
              + +A + + ++Q  G  P+++  V  ++A      L  GKE+H+   K GF SD+ +
Sbjct: 306 GGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGV 365

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+ MY++C  +     VF +M  +D ISWT +I G A++    +AL +++ +Q  G+
Sbjct: 366 QNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGV 425

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
           + + +   S+L ACS    +   + IH  ++  GL +D  + N +V++Y  CG++  +R 
Sbjct: 426 EPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQ 485

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ +  +D+V++ +MI  Y  + L  EAL+LF  + E  ++ D +T ++ L+A ++   
Sbjct: 486 VFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGS 545

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L+  +E++  + + GF  + SV ++LV  YA+CG+   A+ VF  +  +++I W ++I  
Sbjct: 546 LEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGG 605

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
           +  HGRG+ A+ LF +M+ E   PD +TF++LL ACSH+GL+ EG+++   M  D+ + P
Sbjct: 606 SAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIP 665

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHY C+VDLLGRA  L+EA   +++M  +    +W ALLGACR+H N  + E  A+  
Sbjct: 666 TIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESS 725

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           L+LD  N   YV +S+++AA+  W    ++R  M   G+ K PG SWI++G+K+H F+A 
Sbjct: 726 LKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAE 785

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D+SH +S++IY +L  +T  ++ + GYV  T+ V+H+V+E EK   +  HSERLAIAYG+
Sbjct: 786 DRSHPQSEKIYAELDRLTHAMKMK-GYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGL 844

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +  G+ I I KNLRVC DCH+  K +S++  RE++ RD NRFHHF+ GVCSCGDYW
Sbjct: 845 ISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  305 bits (782), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 164/540 (30%), Positives = 297/540 (55%), Gaps = 2/540 (0%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G  V++  +  ++K C  +KDL  G ++H  +++       + VN+L+ MY +C    +A
Sbjct: 18  GAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEA 77

Query: 113 RQLFDRMGEKEDVV-LWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           RQ++ ++   E  V  WN+++  Y   G   +AL L R+MQ+ GL  +  T ++ L +C+
Sbjct: 78  RQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCK 137

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
                  G EIH   +++G    V VAN ++ MYA+CG + EA  V  ++E K  VSW  
Sbjct: 138 SPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTI 197

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
            + G+        A + F++++  G  P+++  ++ ++A      L  GK +H+  +  G
Sbjct: 198 TIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAG 257

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
             SD  +G  L+ MYAKC       +VF ++  +D I+W T+I G A+     +A E++ 
Sbjct: 258 HESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYN 317

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
            +Q EG+  + +    +L AC     +   KEIH  + + G  SD+ + NA++ +Y +CG
Sbjct: 318 QMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCG 377

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
           +I  +R VF+ +  KDV+SWT+MI     +G   EAL ++  M +A VE + +T  S L+
Sbjct: 378 SIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILN 437

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           A SS + L+ G+ ++  ++  G   +  V ++LV+MY+ CG++  A +VF+ +  +D++ 
Sbjct: 438 ACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVA 497

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           + +MI     H  GK A+ LF +++ E   PD +T++ +L AC++SG +   ++   ++R
Sbjct: 498 YNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVR 557



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/597 (27%), Positives = 299/597 (50%), Gaps = 17/597 (2%)

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
           A+ + + +Q+ G   N+  ++  L+ C +      G ++H   ++       Y  NALI 
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 204 MYARCGKMTEAAGVLYQLENKDSV--SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           MY +CG + EA  V  +L   +    SWN+M+ G++Q     KA++  R++Q  G  PD+
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
              ++ +S+    G L  G+E+H  A++ G + D+++ N +++MYAKC  +     VF +
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
           M  +  +SWT  I GYA       A E+F+ ++ EG+  + +   SVL A S    +   
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246

Query: 382 KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
           K +H  I+  G  SD  +  A+V +Y KCG+    R VFE + ++D+++W +MI      
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
           G   EA E++  M    V  + IT V  L+A  + + L  GKE++  + + GF  +  V 
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           ++L+ MY+RCG++  A  VF+ +  KD+I WT+MI      G G  A+ ++ +M+     
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426

Query: 561 PDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYA-CLVDLLGRANHLEEA 618
           P+ +T+ ++L ACS    +  G++   +++      D    H    LV++      +++A
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDA---HVGNTLVNMYSMCGSVKDA 483

Query: 619 YQ-FVRSMQIEPTAEVWCALLGACRVHS-NKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
            Q F R +Q +  A  + A++G    H+  KE  ++  +   E    +   Y+ + N  A
Sbjct: 484 RQVFDRMIQRDIVA--YNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 541

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
            S   +   ++   +R  G       S   +GN + S  A+  S S++  +++K+ +
Sbjct: 542 NSGSLEWAREIHTLVRKGGF-----FSDTSVGNALVSTYAKCGSFSDASIVFEKMTK 593


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 323/850 (38%), Positives = 518/850 (60%), Gaps = 27/850 (3%)

Query: 7   SVLDAEQLFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           +V  A  +F  +SQ R+   W  +L + V +      + TY  M VLGI  D + FP ++
Sbjct: 47  AVSGAPSIF--ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALL 104

Query: 66  KACAMLKDLDCGAKIHGLVLKCGY--DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           KA A L+D++ G +IH  V K GY  DS   + N+LV +Y KC DF    ++FDR+ E+ 
Sbjct: 105 KAVADLQDMELGKQIHAHVYKFGYGVDSVT-VANTLVNLYRKCGDFGAVYKVFDRISERN 163

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE---TLGM 180
            V  WNS+IS+  +  +   AL  FR M    +  +++T V+ + AC +        +G 
Sbjct: 164 QVS-WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  ++ G+ L  ++ N L+AMY + GK+  +  +L     +D V+WN++L+   QN+
Sbjct: 223 QVHAYGLRKGE-LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ-IG 299
              +A+++ RE+   G +PD+    + + A   L  L  GKELHAYA+K G + +   +G
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GL 358
           + L+DMY  C  V    RVF  M  +    W  +IAGY+QN    +AL LF  ++   GL
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
            A+   +  V+ AC      S+ + IHG+++++GL  D  + N ++D+Y + G ID +  
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLM-----------NEANVESDSITLV 466
           +F  +E +D+V+W +MI+ YV +    +AL L + M           +  +++ +SITL+
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           + L + ++LS L KGKE++ + I+     + +V S+LVDMYA+CG L ++ KVF+ +  K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           ++I W  +I A G+HG G+ AIDL   M  +   P+ +TF+++  ACSHSG+++EG +  
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE-PTAEVWCALLGACRVHS 645
            +M+ DY ++P  +HYAC+VDLLGRA  ++EAYQ +  M  +   A  W +LLGA R+H+
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           N E+GEI A+ L++L+P    +YVL++N+++++  W    +VR  M+  G++K PG SWI
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
           E G+++H F+A D SH +S+++   L  + E++ +E GYV  T  VLHNVEE+EK  +L 
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE-GYVPDTSCVLHNVEEDEKEILLC 820

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
           GHSE+LAIA+G+L ++ G++IR+ KNLRVC DCH   K +S++  RE+++RD  RFH F+
Sbjct: 821 GHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFK 880

Query: 826 AGVCSCGDYW 835
            G CSCGDYW
Sbjct: 881 NGTCSCGDYW 890



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 172/615 (27%), Positives = 314/615 (51%), Gaps = 33/615 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG      ++FD++S+R   +WN+++ +  S  +    LE +  M    +   +FT
Sbjct: 142 LYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 201

Query: 61  FPCVIKACA---MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              V+ AC+   M + L  G ++H   L+ G +   FI+N+LVAMY K      ++ L  
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLG 260

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
             G + D+V WN+++S+   + Q LEAL   REM   G+  + +T  + L AC       
Sbjct: 261 SFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319

Query: 178 LGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            G E+HA  +K+G  +   +V +AL+ MY  C ++     V   + ++    WN+M+ G+
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379

Query: 237 VQNDLYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            QN+   +A+  F  + + AG   +       V A  R G     + +H + +K+G   D
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ- 354
             + NTLMDMY++   ++   R+F +M  +D ++W T+I GY  +  H  AL L   +Q 
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499

Query: 355 LE----------GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIV 403
           LE           L  + + + ++L +C+ L  +++ KEIH Y I+  L +D+ + +A+V
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y KCG +  SR VF+ I  K+V++W  +I +Y  +G   EA++L  +M    V+ + +
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFN 521
           T +S  +A S   ++ +G  +  ++++  + +E S    + +VD+  R G +  A ++ N
Sbjct: 620 TFISVFAACSHSGMVDEGLRI-FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 678

Query: 522 CVQTKDLI---LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
            +  +D      W+S++ A+ +H     G++A     ++E       H   LA +Y  S 
Sbjct: 679 -MMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN--VASHYVLLANIY--SS 733

Query: 576 SGLINEGKKFLEIMR 590
           +GL ++  +    M+
Sbjct: 734 AGLWDKATEVRRNMK 748


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 323/850 (38%), Positives = 518/850 (60%), Gaps = 27/850 (3%)

Query: 7   SVLDAEQLFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           +V  A  +F  +SQ R+   W  +L + V +      + TY  M VLGI  D + FP ++
Sbjct: 47  AVSGAPSIF--ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALL 104

Query: 66  KACAMLKDLDCGAKIHGLVLKCGY--DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           KA A L+D++ G +IH  V K GY  DS   + N+LV +Y KC DF    ++FDR+ E+ 
Sbjct: 105 KAVADLQDMELGKQIHAHVYKFGYGVDSVT-VANTLVNLYRKCGDFGAVYKVFDRISERN 163

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE---TLGM 180
            V  WNS+IS+  +  +   AL  FR M    +  +++T V+ + AC +        +G 
Sbjct: 164 QVS-WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  ++ G+ L  ++ N L+AMY + GK+  +  +L     +D V+WN++L+   QN+
Sbjct: 223 QVHAYGLRKGE-LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ-IG 299
              +A+++ RE+   G +PD+    + + A   L  L  GKELHAYA+K G + +   +G
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GL 358
           + L+DMY  C  V    RVF  M  +    W  +IAGY+QN    +AL LF  ++   GL
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
            A+   +  V+ AC      S+ + IHG+++++GL  D  + N ++D+Y + G ID +  
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLM-----------NEANVESDSITLV 466
           +F  +E +D+V+W +MI+ YV +    +AL L + M           +  +++ +SITL+
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           + L + ++LS L KGKE++ + I+     + +V S+LVDMYA+CG L ++ KVF+ +  K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           ++I W  +I A G+HG G+ AIDL   M  +   P+ +TF+++  ACSHSG+++EG +  
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE-PTAEVWCALLGACRVHS 645
            +M+ DY ++P  +HYAC+VDLLGRA  ++EAYQ +  M  +   A  W +LLGA R+H+
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           N E+GEI A+ L++L+P    +YVL++N+++++  W    +VR  M+  G++K PG SWI
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
           E G+++H F+A D SH +S+++   L  + E++ +E GYV  T  VLHNVEE+EK  +L 
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE-GYVPDTSCVLHNVEEDEKEILLC 820

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
           GHSE+LAIA+G+L ++ G++IR+ KNLRVC DCH   K +S++  RE+++RD  RFH F+
Sbjct: 821 GHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFK 880

Query: 826 AGVCSCGDYW 835
            G CSCGDYW
Sbjct: 881 NGTCSCGDYW 890



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 172/615 (27%), Positives = 314/615 (51%), Gaps = 33/615 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG      ++FD++S+R   +WN+++ +  S  +    LE +  M    +   +FT
Sbjct: 142 LYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 201

Query: 61  FPCVIKACA---MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              V+ AC+   M + L  G ++H   L+ G +   FI+N+LVAMY K      ++ L  
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLG 260

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
             G + D+V WN+++S+   + Q LEAL   REM   G+  + +T  + L AC       
Sbjct: 261 SFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319

Query: 178 LGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            G E+HA  +K+G  +   +V +AL+ MY  C ++     V   + ++    WN+M+ G+
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379

Query: 237 VQNDLYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            QN+   +A+  F  + + AG   +       V A  R G     + +H + +K+G   D
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ- 354
             + NTLMDMY++   ++   R+F +M  +D ++W T+I GY  +  H  AL L   +Q 
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499

Query: 355 LE----------GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIV 403
           LE           L  + + + ++L +C+ L  +++ KEIH Y I+  L +D+ + +A+V
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y KCG +  SR VF+ I  K+V++W  +I +Y  +G   EA++L  +M    V+ + +
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFN 521
           T +S  +A S   ++ +G  +  ++++  + +E S    + +VD+  R G +  A ++ N
Sbjct: 620 TFISVFAACSHSGMVDEGLRI-FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 678

Query: 522 CVQTKDLI---LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
            +  +D      W+S++ A+ +H     G++A     ++E       H   LA +Y  S 
Sbjct: 679 -MMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN--VASHYVLLANIY--SS 733

Query: 576 SGLINEGKKFLEIMR 590
           +GL ++  +    M+
Sbjct: 734 AGLWDKATEVRRNMK 748


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 317/870 (36%), Positives = 488/870 (56%), Gaps = 38/870 (4%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YGKC  V  A ++FD +  R V TWN++   YV+ G P + L  + +M +  +  +  T 
Sbjct: 85  YGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTV 144

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++  C+ L+DL  G +IHG V++ G     F+ ++ V  YAKC   R+A+ +FD M  
Sbjct: 145 SSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPH 204

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV WNS+ S Y   G   + L +FREM   G+  +  T    L AC D      G  
Sbjct: 205 R-DVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKA 263

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   +K G    V+V+NAL+ +Y  C  + EA  V   + +++ ++WNS+ + +V    
Sbjct: 264 IHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGF 323

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             K +  FRE+   G KPD +   + + A  +L +L +GK +H +A+K G V D+ +   
Sbjct: 324 PQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTA 383

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+++YA C CV     VF  M  ++ ++W ++ + Y       K L +FR + L G+  D
Sbjct: 384 LVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPD 443

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFE 420
           ++ + S+L ACS L+ +   K IHG+ +R G+  D+ + NA++ +Y KC  +  ++ VF+
Sbjct: 444 LVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFD 503

Query: 421 SIESKDVVSWTSMISSY-----------------------------------VHNGLANE 445
            I  ++V SW  ++++Y                                   V N    E
Sbjct: 504 LIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEE 563

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A+E+F  M     + D  T+ S L A S    L+ GKE++ ++ R   + + +  ++LVD
Sbjct: 564 AMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVD 623

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MYA+CG L ++  VF+ +  KD+  W +MI ANG+HG GK A+ LF KM      PD  T
Sbjct: 624 MYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSAT 683

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F  +L ACSHS L+ EG +    M  D+ ++P  EHY C+VD+  RA  LEEAY F++ M
Sbjct: 684 FTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRM 743

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
            +EPTA  W A L  CRV+ N EL +I AKKL E+DP    NYV + N+   ++ W +  
Sbjct: 744 PMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEAS 803

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
           ++R  M+  G+ KTPG SW  +GN++H+F+A DKS+ ESD+IY  L E+  K+ +  GY 
Sbjct: 804 KIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKI-KAAGYK 862

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
             T +VLH++++EEK + L  HSE+LA+A+G+L     S IR+ KNLR+C DCH+  K +
Sbjct: 863 PDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYM 922

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S + G  +VVRD+ RFHHF+ G CSC D+W
Sbjct: 923 SNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  295 bits (755), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 197/668 (29%), Positives = 321/668 (48%), Gaps = 48/668 (7%)

Query: 34  VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD 93
           + +G P   ++ Y+  R  GI  D   F  V KACA  +D     + H    +CG  S  
Sbjct: 16  IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
            I N+ +  Y KC     AR++FD +  + DVV WNS+ + Y   G   + L +FR+M  
Sbjct: 76  SIGNAFIHAYGKCKCVEGARRVFDDLVAR-DVVTWNSLSACYVNCGFPQQGLNVFRKMGL 134

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
             +  N  T  + L  C D      G EIH   V+ G    V+V++A +  YA+C  + E
Sbjct: 135 NKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVRE 194

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V   + ++D V+WNS+ + +V      K +  FRE+   G KPD V     +SA   
Sbjct: 195 AQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSD 254

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           L +L +GK +H +A+K G V ++ + N L+++Y  C CV     VF  M  ++ I+W ++
Sbjct: 255 LQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSL 314

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
            + Y       K L +FR + L G+  D M + S+L ACS LK +   K IHG+ ++ G+
Sbjct: 315 ASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGM 374

Query: 394 -SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
             D+ +  A+V++Y  C  +  ++ VF+ +  ++VV+W S+ S YV+ G   + L +F  
Sbjct: 375 VEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFRE 434

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M    V+ D +T++S L A S L  LK GK ++GF +R G   +  V ++L+ +YA+C  
Sbjct: 435 MVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVC 494

Query: 513 LDIANKVFNCVQTKDLILWTSMINA--------NGLH----------------------- 541
           +  A  VF+ +  +++  W  ++ A         GL+                       
Sbjct: 495 VREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGG 554

Query: 542 ----GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
                R + A+++F KM+   F PD  T  ++L ACS S  +  GK+    + C Y    
Sbjct: 555 CVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKE----IHC-YVFRH 609

Query: 598 WPE----HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN-KELGEI 652
           W +        LVD+  +   L  +      M I+     W  ++ A  +H N KE   +
Sbjct: 610 WKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFS-WNTMIFANGMHGNGKEALSL 668

Query: 653 VAKKLLEL 660
             K LL +
Sbjct: 669 FEKMLLSM 676



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 242/526 (46%), Gaps = 45/526 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  C  V +A+ +FD +  R V TWN++   YV+ G P + L  +  M + G+  D   
Sbjct: 286 LYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMA 345

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ AC+ LKDL  G  IHG  +K G     F+  +LV +YA C   R+A+ +FD M 
Sbjct: 346 MSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP 405

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + +VV WNS+ S Y   G   + L +FREM   G+  +  T ++ L AC D      G 
Sbjct: 406 HR-NVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGK 464

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   V+ G    V+V NAL+++YA+C  + EA  V   + +++  SWN +LT +  N 
Sbjct: 465 VIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNK 524

Query: 241 LYCK-----------------------------------AMQFFRELQGAGQKPDQVCTV 265
            Y K                                   AM+ FR++Q  G KPD+    
Sbjct: 525 EYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIY 584

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           + + A      L  GKE+H Y  +     DL   N L+DMYAKC  ++    VF  M  +
Sbjct: 585 SILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK 644

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           D  SW T+I     +    +AL LF  + L  +  D      VL ACS    + +  +I 
Sbjct: 645 DVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIF 704

Query: 386 GYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV-VSWTSMISS---YVH 439
             + R  L   +      +VD+Y + G ++ +    + +  +   ++W + ++    Y +
Sbjct: 705 NSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKN 764

Query: 440 NGLAN-EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
             LA   A +LF +  + N  ++ +TL + L  A   S   K ++L
Sbjct: 765 VELAKISAKKLFEI--DPNGSANYVTLFNILVTAKLWSEASKIRKL 808


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  610 bits (1573), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 316/877 (36%), Positives = 503/877 (57%), Gaps = 79/877 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G V DA ++FDK+S+R VF+W A++  Y   G+    ++ +  M   G+  D F 
Sbjct: 133 VYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFV 192

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V KAC+ LK+   G  ++  +L  G++    +  S++ M+ KC     AR+ F+ + 
Sbjct: 193 FPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI- 251

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E +DV +WN ++S Y++ G+  +AL    +M+  G+  +  T+                 
Sbjct: 252 EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW----------------- 294

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-----NKDSVSWNSMLTG 235
                             NA+I+ YA+ G+  EA+    ++        + VSW +++ G
Sbjct: 295 ------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK-QGFVS 294
             QN    +A+  FR++   G KP+ +   +AVSA   L  L +G+E+H Y IK +   S
Sbjct: 337 SEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDS 396

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           DL +GN+L+D YAKC  V    R F  +   D +SW  ++AGYA    H +A+EL   ++
Sbjct: 397 DLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK 456

Query: 355 LEGLDADVMI-----------------------------------IGSVLMACSGLKCMS 379
            +G++ D++                                    I   L AC  ++ + 
Sbjct: 457 FQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLK 516

Query: 380 QTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             KEIHGY++R  +     + +A++ +Y  C +++ + +VF  + ++DVV W S+IS+  
Sbjct: 517 LGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACA 576

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            +G +  AL+L   MN +NVE +++T+VSAL A S L+ L++GKE++ FIIR G +    
Sbjct: 577 QSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNF 636

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           + +SL+DMY RCG++  + ++F+ +  +DL+ W  MI+  G+HG G  A++LF +     
Sbjct: 637 ILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMG 696

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
             P+HITF  LL ACSHSGLI EG K+ ++M+ +Y +DP  E YAC+VDLL RA    E 
Sbjct: 697 LKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNET 756

Query: 619 YQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
            +F+  M  EP A VW +LLGACR+H N +L E  A+ L EL+P + GNYVL++N+++A+
Sbjct: 757 LEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAA 816

Query: 679 RKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKL 738
            +W+D  ++R  M+  G+ K PG SWIE+  K+HSF+  D SH   ++I  K+  +   +
Sbjct: 817 GRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDI 876

Query: 739 EREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDC 798
            +E GYV  T FVL +V+E+EK   L GHSE++A+A+G++ +T G+ +RI KNLRVC DC
Sbjct: 877 -KEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDC 935

Query: 799 HSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           HS  K +S++  R++++RD  RFHHF  GVCSCGDYW
Sbjct: 936 HSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 161/596 (27%), Positives = 289/596 (48%), Gaps = 71/596 (11%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +++ C  L +L  G ++H  ++  G D  +F+ + L+ +Y +      AR++FD+M 
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +V  W +I+  Y   G   E + LF  M   G+  + + F    +AC +     +G 
Sbjct: 152 ER-NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +++   +  G      V  +++ M+ +CG+M  A     ++E KD   WN M++G+    
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + KA++   +++ +G KPDQV     +S   + G     +E   Y ++ G + D +   
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQF---EEASKYFLEMGGLKDFK--- 324

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
                                    + +SWT +IAG  QN    +AL +FR + LEG+  
Sbjct: 325 ------------------------PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKP 360

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYSRNV 418
           + + I S + AC+ L  +   +EIHGY I+  +  SDL++ N++VD Y KC +++ +R  
Sbjct: 361 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK 420

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI--------------- 463
           F  I+  D+VSW +M++ Y   G   EA+EL   M    +E D I               
Sbjct: 421 FGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDG 480

Query: 464 --------------------TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
                               T+  AL+A   +  LK GKE++G+++R    L   V S+L
Sbjct: 481 KAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSAL 540

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           + MY+ C +L++A  VF+ + T+D+++W S+I+A    GR   A+DL  +M   +   + 
Sbjct: 541 ISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNT 600

Query: 564 ITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
           +T ++ L ACS    + +GK+  + I+RC   LD        L+D+ GR   ++++
Sbjct: 601 VTMVSALPACSKLAALRQGKEIHQFIIRCG--LDTCNFILNSLIDMYGRCGSIQKS 654



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 233/482 (48%), Gaps = 38/482 (7%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
           + + LQ C       LG ++HA  V +G ++  ++ + L+ +Y + G + +A  +  ++ 
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
            ++  SW +++  +     Y + ++ F  +   G +PD         A   L N   GK+
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           ++ Y +  GF  +  +  +++DM+ KC  ++   R F ++  +D   W  +++GY     
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI 402
             KAL+    ++L G+  D +   +++   SG     Q +E   Y +  G          
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAII---SGYAQSGQFEEASKYFLEMG---------- 318

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
                  G  D+  N         VVSWT++I+    NG   EAL +F  M    V+ +S
Sbjct: 319 -------GLKDFKPN---------VVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNS 362

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFN 521
           IT+ SA+SA ++LS+L+ G+E++G+ I+ +  + +  V +SLVD YA+C ++++A + F 
Sbjct: 363 ITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFG 422

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            ++  DL+ W +M+    L G  + AI+L  +M+ +   PD IT+  L+   +  G   +
Sbjct: 423 MIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYG---D 479

Query: 582 GKKFLEIMRCDYQ--LDPWPEHYACLVDLLGRANHL---EEAYQFVRSMQIEPTAEVWCA 636
           GK  LE  +  +   +DP     +  +   G+  +L   +E + +V    IE +  V  A
Sbjct: 480 GKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSA 539

Query: 637 LL 638
           L+
Sbjct: 540 LI 541



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 161/366 (43%), Gaps = 9/366 (2%)

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCV----NYMGRVFYQMT-AQDFISWTTIIAGYAQ 339
            +A+   F    +  + L  +  + CC+    N   +   ++T A+  I+  +      +
Sbjct: 7   PFALNSNFAIQPKGTSPLQTLPTRNCCIVASTNTKSQNLRKLTNARQRITGFSGGGSVHR 66

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL 399
           N     A  L  ++ L   D  + I  S+L  C  L  +    ++H  ++  G+     L
Sbjct: 67  NGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFL 126

Query: 400 NA-IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            + +++VY + G ++ +R +F+ +  ++V SWT+++  Y   G   E ++LFYLM    V
Sbjct: 127 GSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGV 186

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
             D         A S L   + GK++  +++  GF     V  S++DM+ +CG +DIA +
Sbjct: 187 RPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARR 246

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
            F  ++ KD+ +W  M++     G  K A+     M+     PD +T+ A++   + SG 
Sbjct: 247 FFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQ 306

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE---PTAEVWC 635
             E  K+   M       P    +  L+    +  +  EA    R M +E   P +    
Sbjct: 307 FEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIA 366

Query: 636 ALLGAC 641
           + + AC
Sbjct: 367 SAVSAC 372


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  609 bits (1571), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 325/818 (39%), Positives = 506/818 (61%), Gaps = 43/818 (5%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV--NSLVAMYAKCYDFR 110
           G S D F FP V+KA A +++L  G +IH  V K GY S   +   N+LV MY KC    
Sbjct: 5   GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
            A ++FDR+ E+ D V WNSIISA     +   A+  FR M   G   +++T V+   AC
Sbjct: 65  DAYKVFDRITER-DQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALAC 123

Query: 171 EDSSFET---LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
            +        LG +IH    + G + + +  NAL+AMYA+ G++ +A  +L   E++D V
Sbjct: 124 SNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLV 182

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           +WNSM++ F QN+ + +A+ F R +   G KPD V   + + A   L  L  GKE+HAYA
Sbjct: 183 TWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYA 242

Query: 288 IK-QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
           ++    + +  +G+ L+DMY  C  V     VF  +  +    W  +IAGYAQ+    KA
Sbjct: 243 LRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKA 302

Query: 347 LELFRTVQLE---GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAI 402
           L LF  +++E   GL ++   + S++ A    + +S+ + IHGY+I++GL ++  + NA+
Sbjct: 303 LMLF--IEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNAL 360

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN-------- 454
           +D+Y + G+I  S+ +F+S+E +D+VSW ++I+SYV  G +++AL L + M         
Sbjct: 361 IDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTY 420

Query: 455 --------EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
                   +   + +SITL++ L   +SLS L KGKE++ + IR     + +V S+LVDM
Sbjct: 421 DGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDM 480

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE-----SFAP 561
           YA+CG L++A +VF+ +  +++I W  +I A G+HG+GK +++LF  M AE        P
Sbjct: 481 YAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKP 540

Query: 562 DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
             +TF+AL  +CSHSG+++EG      M+ ++ ++P P+HYAC+VDL+GRA  +EEAY  
Sbjct: 541 TEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGL 600

Query: 622 VRSMQIEPTA----EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           V +M   P+       W +LLGACR++ N E+GEI A+ LL+L P    +YVL+SN++++
Sbjct: 601 VNTM---PSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSS 657

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           +  W     +R RM+  G+KK PG SWIE G+++H F+A D SH +S++++  L  ++E+
Sbjct: 658 AGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSER 717

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVD 797
           L++EG YV  T  VLH+++EEEK  +L GHSE+LAIA+G+L +  G+ IR+ KNLRVC D
Sbjct: 718 LKKEG-YVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 776

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CH+  K +S++  RE+++RDA RFHHF+ G CSCGDYW
Sbjct: 777 CHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 169/623 (27%), Positives = 309/623 (49%), Gaps = 39/623 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + DA ++FD++++R   +WN+++ A     E    ++ +  M + G    +FT
Sbjct: 56  MYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFT 115

Query: 61  FPCVIKACAMLKDLD---CGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              +  AC+ L+  D    G +IHG   + G+  T F  N+L+AMYAK      A+ L  
Sbjct: 116 LVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRT-FSNNALMAMYAKLGRLDDAKSLL- 173

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            + E  D+V WNS+IS++S + + +EAL   R M   G+  +  TF + L AC       
Sbjct: 174 VLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLR 233

Query: 178 LGMEIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            G EIHA  +++   ++  +V +AL+ MY  CG++     V   + ++    WN+M+ G+
Sbjct: 234 TGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGY 293

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNA-VSASGRLGNLLNGKELHAYAIKQGFVSD 295
            Q++   KA+  F E++ A        T+++ V A  R   +   + +H Y IK+G  ++
Sbjct: 294 AQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETN 353

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA----QNNCHLKALELFR 351
             + N L+DMY++   +    R+F  M  +D +SW TII  Y      ++  L   E+ R
Sbjct: 354 RYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQR 413

Query: 352 TVQLEGLDADV------------MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVI 398
             +    D D             + + +VL  C+ L  +++ KEIH Y IR  L S + +
Sbjct: 414 IEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTV 473

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM----- 453
            +A+VD+Y KCG ++ +R VF+ +  ++V++W  +I +Y  +G   E+LELF  M     
Sbjct: 474 GSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGA 533

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGA 512
               V+   +T ++  ++ S   ++ +G  L +      G        + +VD+  R G 
Sbjct: 534 KGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGK 593

Query: 513 LDIANKVFNCVQT--KDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFL 567
           ++ A  + N + +    +  W+S++ A  ++     G++A +   +++ +     H   L
Sbjct: 594 VEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPD--VASHYVLL 651

Query: 568 ALLYACSHSGLINEGKKFLEIMR 590
           + +Y  S +GL ++       M+
Sbjct: 652 SNIY--SSAGLWDKAMNLRRRMK 672



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 165/309 (53%), Gaps = 6/309 (1%)

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--VSDLQIGNTLMDMYAKCCC 311
           G+G  PD       + A   +  L  GK++HA+  K G+   S + I NTL++MY KC  
Sbjct: 3   GSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGG 62

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           +    +VF ++T +D +SW +II+   +      A++ FR + +EG +     + S+ +A
Sbjct: 63  LGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALA 122

Query: 372 CSGLK---CMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
           CS L+    +   K+IHG   RKG       NA++ +Y K G +D ++++    E +D+V
Sbjct: 123 CSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLV 182

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           +W SMISS+  N    EAL    LM    V+ D +T  S L A S L +L+ GKE++ + 
Sbjct: 183 TWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYA 242

Query: 489 IRKGFNLEGS-VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
           +R    +E S V S+LVDMY  CG ++    VF+ V  + + LW +MI         + A
Sbjct: 243 LRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKA 302

Query: 548 IDLFYKMEA 556
           + LF +MEA
Sbjct: 303 LMLFIEMEA 311


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 329/844 (38%), Positives = 496/844 (58%), Gaps = 11/844 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MY  CGS  D+  +FD +  + +F WNA++ +Y  N     VLET+  M     +  D F
Sbjct: 129 MYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHF 188

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+PCVIKACA + D+  G  +HGLV+K G     F+ N+LV+ Y        A QLFD M
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV----GLVTNAYTFVAALQACEDSSF 175
            E+ ++V WNS+I  +S +G   E+  L  EM         + +  T V  L  C     
Sbjct: 249 PER-NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             LG  +H   VK   + ++ + NAL+ MY++CG +T A  +     NK+ VSWN+M+ G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367

Query: 236 FVQNDLYCKAMQFFRELQGAGQ--KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           F             R++   G+  K D+V  +NAV        L + KELH Y++KQ FV
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            +  + N  +  YAKC  ++Y  RVF+ + ++   SW  +I G+AQ+N    +L+    +
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 487

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
           ++ GL  D   + S+L ACS LK +   KE+HG+IIR  L  DL +  +++ +Y  CG +
Sbjct: 488 KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 547

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
              + +F+++E K +VSW ++I+ Y+ NG  + AL +F  M    ++   I+++    A 
Sbjct: 548 CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           S L  L+ G+E + + ++     +  +A SL+DMYA+ G++  ++KVFN ++ K    W 
Sbjct: 608 SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 667

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           +MI   G+HG  K AI LF +M+     PD +TFL +L AC+HSGLI+EG ++L+ M+  
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGE 651
           + L P  +HYAC++D+LGRA  L++A + V   M  E    +W +LL +CR+H N E+GE
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
            VA KL EL+P  P NYVL+SN++A   KW+DV +VR RM    L+K  G SWIE+  K+
Sbjct: 788 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKV 847

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
            SF+  ++     +EI K L  I E    + GY   T  V H++ EEEK++ L GHSE+L
Sbjct: 848 FSFVVGERFLDGFEEI-KSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKL 906

Query: 772 AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           A+ YG++K++EG+ IR+ KNLR+CVDCH+  KL+S++  RE+VVRD  RFHHF+ GVCSC
Sbjct: 907 ALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSC 966

Query: 832 GDYW 835
           GDYW
Sbjct: 967 GDYW 970



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 261/534 (48%), Gaps = 15/534 (2%)

Query: 55  SVDAF-----TFPCVIKACAMLKDLDCGAKIHGLVL-KCGYDSTDFIVNSLVAMYAKCYD 108
           S DAF         +++A    KD++ G KIH LV       + D +   ++ MYA C  
Sbjct: 76  SSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGS 135

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAAL 167
              +R +FD +  K ++  WN++IS+YS +    E L  F EM     L+ + +T+   +
Sbjct: 136 PDDSRFVFDALRSK-NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVI 194

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           +AC   S   +G+ +H   VK+G    V+V NAL++ Y   G +T+A  +   +  ++ V
Sbjct: 195 KACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLV 254

Query: 228 SWNSMLTGFVQNDLYCKAMQFFREL---QGAGQ-KPDQVCTVNAVSASGRLGNLLNGKEL 283
           SWNSM+  F  N    ++     E+    G G   PD    V  +    R   +  GK +
Sbjct: 255 SWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 314

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           H +A+K     +L + N LMDMY+KC C+     +F     ++ +SW T++ G++     
Sbjct: 315 HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDT 374

Query: 344 LKALELFRTVQLEGLD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILN 400
               ++ R +   G D  AD + I + +  C     +   KE+H Y +++  + + ++ N
Sbjct: 375 HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN 434

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A V  Y KCG++ Y++ VF  I SK V SW ++I  +  +     +L+    M  + +  
Sbjct: 435 AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLP 494

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           DS T+ S LSA S L  L+ GKE++GFIIR     +  V  S++ +Y  CG L     +F
Sbjct: 495 DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           + ++ K L+ W ++I     +G    A+ +F +M         I+ + +  ACS
Sbjct: 555 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 201/392 (51%), Gaps = 8/392 (2%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KP 259
           +I MYA CG   ++  V   L +K+   WN++++ + +N+LY + ++ F E+       P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D       + A   + ++  G  +H   +K G V D+ +GN L+  Y     V    ++F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD----ADVMIIGSVLMACSGL 375
             M  ++ +SW ++I  ++ N    ++  L   +  E  D     DV  + +VL  C+  
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305

Query: 376 KCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           + +   K +HG+ ++  L  +LV+ NA++D+Y KCG I  ++ +F+   +K+VVSW +M+
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365

Query: 435 SSYVHNGLANEALELF--YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
             +   G  +   ++    L    +V++D +T+++A+      S L   KEL+ + +++ 
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           F     VA++ V  YA+CG+L  A +VF+ +++K +  W ++I  +      ++++D   
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           +M+     PD  T  +LL ACS    +  GK+
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 125/250 (50%), Gaps = 16/250 (6%)

Query: 350 FRTVQL------EGLDADVMI---IGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVI 398
           FRTVQ          DA +++   +G +L A    K +   ++IH  +    +  +D V+
Sbjct: 63  FRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL 122

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNEAN 457
              I+ +Y  CG+ D SR VF+++ SK++  W ++ISSY  N L +E LE F  +++  +
Sbjct: 123 CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTD 182

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           +  D  T    + A + +S +  G  ++G +++ G   +  V ++LV  Y   G +  A 
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 242

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE----SFAPDHITFLALLYAC 573
           ++F+ +  ++L+ W SMI     +G  + +  L  +M  E    +F PD  T + +L  C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302

Query: 574 SHSGLINEGK 583
           +    I  GK
Sbjct: 303 AREREIGLGK 312


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 301/790 (38%), Positives = 484/790 (61%), Gaps = 18/790 (2%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVL--KCGYDSTDFIV-NSLVAMYAKCYDFRKA 112
           VD  ++  V++ C+ ++ L+ G + H LV     G D  D ++   LV MY KC D   A
Sbjct: 89  VDDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENA 148

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTF------VAA 166
           R++FD M +  DV +W +++S Y+ +G   E + LFR+M   G+  +AYT       +A 
Sbjct: 149 RRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAG 208

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L + ED      G  +H    K G   Q  V NAL+A YA+  +  +A  V   + ++D 
Sbjct: 209 LGSIED------GEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDV 262

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           +SWNSM++G   N LY KA++ F  +   G++ D    ++ + A   L  L  G+ +H Y
Sbjct: 263 ISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGY 322

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
           ++K GF+S   + N L+DMY+ C       ++F  M  ++ +SWT +I  Y +   + K 
Sbjct: 323 SVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKV 382

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDV 405
             LF+ + LEG   D+  I S L A +G + +   K +HGY IR G+   L + NA++++
Sbjct: 383 AGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEM 442

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y KCGN++ ++ +F+ + SKD++SW ++I  Y  N LANEA  LF  M    +  +++T+
Sbjct: 443 YVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEM-LLQLRPNAVTM 501

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
              L AA+SLS L++G+E++ + +R+G+  +  VA++L+DMY +CGAL +A ++F+ +  
Sbjct: 502 TCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSN 561

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           K+LI WT M+   G+HGRG+ AI LF +M     APD  +F A+LYACSHSGL +EG +F
Sbjct: 562 KNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRF 621

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
            + MR +++++P  +HY C+VDLL    +L+EAY+F+ SM IEP + +W +LL  CR+H 
Sbjct: 622 FDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHR 681

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           N +L E VA+++ EL+P N G YVL++N++A + +W+ V +++ ++ G GL++  G SWI
Sbjct: 682 NVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWI 741

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
           E   K+H FIA +++H +   I + L E+ ++++ E G+  + ++ L   +     + L 
Sbjct: 742 EAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEE-GHDPKKKYALMGADNAVHGEALC 800

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
           GHS +LA+A+GVL  +EG LIR+TKN RVC  CH   K +S++  RE+++RD+NRFHHFE
Sbjct: 801 GHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFE 860

Query: 826 AGVCSCGDYW 835
            G CSC  YW
Sbjct: 861 QGRCSCRGYW 870



 Score =  279 bits (713), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 174/578 (30%), Positives = 304/578 (52%), Gaps = 9/578 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRT-VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KCG + +A ++FD++ Q + V  W A++  Y   G+    +  + +M   G+  DA+
Sbjct: 138 MYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAY 197

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T  CV+K  A L  ++ G  +HGL+ K G+ S   + N+L+A YAK    + A  +FD M
Sbjct: 198 TISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGM 257

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + DV+ WNS+IS  +++G   +A+ LF  M   G   ++ T ++ L AC +     LG
Sbjct: 258 PHR-DVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLG 316

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H  +VK+G   Q  +AN L+ MY+ C        +   +  K+ VSW +M+T + + 
Sbjct: 317 RVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRA 376

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            LY K    F+E+   G +PD     +A+ A      L +GK +H YAI+ G    L + 
Sbjct: 377 GLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVT 436

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N LM+MY KC  +     +F  + ++D ISW T+I GY++NN   +A  LF  + L+ L 
Sbjct: 437 NALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LR 495

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNV 418
            + + +  +L A + L  + + +E+H Y +R+G L D  + NA++D+Y KCG +  +R +
Sbjct: 496 PNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRL 555

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ + +K+++SWT M++ Y  +G   +A+ LF  M  + +  D+ +  + L A S   + 
Sbjct: 556 FDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLR 615

Query: 479 KKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
            +G       +RK   +E  +   + +VD+    G L  A +  + +  + D  +W S++
Sbjct: 616 DEGWRFFD-AMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLL 674

Query: 536 NANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYA 572
               +H   K+A ++  ++ E E     +   LA +YA
Sbjct: 675 RGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYA 712


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 323/841 (38%), Positives = 504/841 (59%), Gaps = 9/841 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAF 59
           MY  C S  D+  +F+   ++ +F WNA+L  Y+ N      +  +  M  L   V D F
Sbjct: 138 MYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNF 197

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T PCVIKAC  + D+  G  +HG  LK    S  F+ N+L+AMY K      A ++FD+M
Sbjct: 198 TLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKM 257

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQR--VGLVTNAYTFVAALQACEDSSFET 177
            ++ ++V WNS++ A   +G   E+ GLF+ +     GL+ +  T V  +  C       
Sbjct: 258 PQR-NLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVR 316

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LGM  H   +K G   ++ V ++L+ MY++CG + EA  VL+    K+ +SWNSM+ G+ 
Sbjct: 317 LGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEAR-VLFDTNEKNVISWNSMIGGYS 375

Query: 238 QNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV-SD 295
           ++  +  A +  R++Q   + K ++V  +N +         L  KE+H YA++ GF+ SD
Sbjct: 376 KDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSD 435

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             + N  +  YAKC  ++Y   VF  M ++   SW  +I G+ QN    KAL+L+  ++ 
Sbjct: 436 ELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRG 495

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
            GL+ D+  I S+L AC+ LK +S  KEIHG ++R G   D  I  ++V +Y +CG I  
Sbjct: 496 SGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILL 555

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           ++  F+++E K++V W +MI+ +  N    +AL++F+ M  + +  D I+++ AL A S 
Sbjct: 556 AKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQ 615

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           +S L+ GKEL+ F ++        V  SL+DMYA+CG ++ +  +F+ V  K  + W  +
Sbjct: 616 VSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVL 675

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I   G+HG G+ AI+LF  M+   F PD +TF+ALL AC+H+GL+ EG ++L  M+  + 
Sbjct: 676 ITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFG 735

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  EHYAC+VD+LGRA  L EA + V  +  +P + +W +LL +CR + + ++GE VA
Sbjct: 736 IKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVA 795

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
            KLLEL P    NYVLISN +A   KW +V ++R RM+  GL+K  G SWIEIG K+  F
Sbjct: 796 NKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRF 855

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           +  D+S  +S +I +   E+ +K+ +  GY   T  VLH +EE+EK+++L  HSE+LAI+
Sbjct: 856 LVGDESLLQSMKIQQTWIELEKKINKI-GYKPDTSCVLHELEEDEKIKILRNHSEKLAIS 914

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G+L + +G+ +R+ KNLR+CVDCH+  KLVS++  RE++VRD  RFHHF+ G CSCGDY
Sbjct: 915 FGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDY 974

Query: 835 W 835
           W
Sbjct: 975 W 975



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 226/441 (51%), Gaps = 11/441 (2%)

Query: 167 LQACEDSSFETLGMEIH--AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
           LQ C +     +G +IH   +T    QN  V +   L+ MY+ C    ++  V      K
Sbjct: 100 LQLCGEYKNIEIGRKIHNFISTSPHFQN-DVVLITRLVTMYSICDSPYDSCLVFNASRRK 158

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKEL 283
           +   WN++L+G+++N L+  A+  F E+    +  PD       + A   + ++  G+ +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           H +A+K   +SD+ +GN L+ MY K   V    +VF +M  ++ +SW +++    +N   
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278

Query: 344 LKALELFRTV--QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILN 400
            ++  LF+ +    EGL  DV  + +V+  C+    +      HG  ++ GL  +L + +
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNS 338

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN-EANVE 459
           +++D+Y KCG +  +R +F++ E K+V+SW SMI  Y  +     A EL   M  E  V+
Sbjct: 339 SLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVK 397

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGF-NLEGSVASSLVDMYARCGALDIANK 518
            + +TL++ L          K KE++G+ +R GF   +  VA++ V  YA+CG+L  A  
Sbjct: 398 VNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEG 457

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           VF  +++K +  W ++I  +  +G  + A+DL+  M      PD  T  +LL AC+    
Sbjct: 458 VFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKS 517

Query: 579 INEGKKFL-EIMRCDYQLDPW 598
           ++ GK+    ++R  ++LD +
Sbjct: 518 LSCGKEIHGSMLRNGFELDEF 538



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 114/227 (50%), Gaps = 5/227 (2%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFES 421
           +IG +L  C   K +   ++IH +I       +D+V++  +V +Y  C +   S  VF +
Sbjct: 95  LIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNA 154

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKK 480
              K++  W +++S Y+ N L  +A+ +F  +++      D+ TL   + A   +  ++ 
Sbjct: 155 SRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRL 214

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           G+ ++GF ++     +  V ++L+ MY + G ++ A KVF+ +  ++L+ W S++ A   
Sbjct: 215 GEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLE 274

Query: 541 HGRGKVAIDLFYKM--EAESFAPDHITFLALLYACSHSGLINEGKKF 585
           +G  + +  LF  +    E   PD  T + ++  C+  G +  G  F
Sbjct: 275 NGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVF 321


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 312/807 (38%), Positives = 499/807 (61%), Gaps = 24/807 (2%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY--DSTDFIVNSLVAMYAKC 106
           M VLGI  D + FP ++KA A L+D++ G +IH  V K GY  DS   + N+LV +Y KC
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVT-VANTLVNLYRKC 59

Query: 107 YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
            DF    ++FDR+ E+  V  WNS+IS+  +  +   AL  FR M    +  +++T V+ 
Sbjct: 60  GDFGAVYKVFDRISERNQVS-WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSV 118

Query: 167 LQACEDSSFE---TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN 223
           + AC +        +G ++HA  ++ G+ L  ++ N L+AMY + GK+  +  +L     
Sbjct: 119 VTACSNLPMPEGLMMGKQVHAYGLRKGE-LNSFIINTLVAMYGKLGKLASSKVLLGSFGG 177

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           +D V+WN++L+   QN+   +A+++ RE+   G +PD+    + + A   L  L  GKEL
Sbjct: 178 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 237

Query: 284 HAYAIKQGFVSDLQ-IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           HAYA+K G + +   +G+ L+DMY  C  V    RVF  M  +    W  +IAGY+QN  
Sbjct: 238 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 297

Query: 343 HLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILN 400
             +AL LF  ++   GL A+   +  V+ AC      S+ + IHG+++++GL  D  + N
Sbjct: 298 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN 357

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM------- 453
            ++D+Y + G ID +  +F  +E +D+V+W +MI+ YV +    +AL L + M       
Sbjct: 358 TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 417

Query: 454 ----NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
               +  +++ +SITL++ L + ++LS L KGKE++ + I+     + +V S+LVDMYA+
Sbjct: 418 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAK 477

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CG L ++ KVF+ +  K++I W  +I A G+HG G+ AIDL   M  +   P+ +TF+++
Sbjct: 478 CGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 537

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE- 628
             ACSHSG+++EG +   +M+ DY ++P  +HYAC+VDLLGRA  ++EAYQ +  M  + 
Sbjct: 538 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF 597

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
             A  W +LLGA R+H+N E+GEI A+ L++L+P    +YVL++N+++++  W    +VR
Sbjct: 598 NKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVR 657

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
             M+  G++K PG SWIE G+++H F+A D SH +S+++   L  + E++ +E GYV  T
Sbjct: 658 RNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE-GYVPDT 716

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
             VLHNVEE+EK  +L GHSE+LAIA+G+L ++ G++IR+ KNLRVC DCH   K +S++
Sbjct: 717 SCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKI 776

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
             RE+++RD  RFH F+ G CSCGDYW
Sbjct: 777 VDREIILRDVRRFHRFKNGTCSCGDYW 803



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 181/661 (27%), Positives = 329/661 (49%), Gaps = 50/661 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG      ++FD++S+R   +WN+++ +  S  +    LE +  M    +   +FT
Sbjct: 55  LYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 114

Query: 61  FPCVIKACA---MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              V+ AC+   M + L  G ++H   L+ G +   FI+N+LVAMY K      ++ L  
Sbjct: 115 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLG 173

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
             G + D+V WN+++S+   + Q LEAL   REM   G+  + +T  + L AC       
Sbjct: 174 SFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 232

Query: 178 LGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            G E+HA  +K+G  +   +V +AL+ MY  C ++     V   + ++    WN+M+ G+
Sbjct: 233 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 292

Query: 237 VQNDLYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            QN+   +A+  F  + + AG   +       V A  R G     + +H + +K+G   D
Sbjct: 293 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 352

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ- 354
             + NTLMDMY++   ++   R+F +M  +D ++W T+I GY  +  H  AL L   +Q 
Sbjct: 353 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 412

Query: 355 LE----------GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIV 403
           LE           L  + + + ++L +C+ L  +++ KEIH Y I+  L +D+ + +A+V
Sbjct: 413 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 472

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y KCG +  SR VF+ I  K+V++W  +I +Y  +G   EA++L  +M    V+ + +
Sbjct: 473 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 532

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFN 521
           T +S  +A S   ++ +G  +  ++++  + +E S    + +VD+  R G +  A ++ N
Sbjct: 533 TFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 591

Query: 522 CVQTKDLI---LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
            +  +D      W+S++ A+ +H     G++A     ++E       H   LA +Y  S 
Sbjct: 592 -MMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN--VASHYVLLANIY--SS 646

Query: 576 SGLINEGKKFLEIMRCD-YQLDP---WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           +GL ++  +    M+    + +P   W EH              +E ++FV      P +
Sbjct: 647 AGLWDKATEVRRNMKEQGVRKEPGCSWIEHG-------------DEVHKFVAGDSSHPQS 693

Query: 632 E 632
           E
Sbjct: 694 E 694


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 307/836 (36%), Positives = 494/836 (59%), Gaps = 3/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G ++ A ++FD +  +   +W AM+  +  NG     +  +  M   GI    + 
Sbjct: 156 LYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYV 215

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+  C  +K  D G ++H LV K G     ++ N+LV +Y++  +F  A ++F +M 
Sbjct: 216 FSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQ 275

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K++V  +NS+IS  +  G    AL LF +M+R  L  +  T  + L AC  +     G 
Sbjct: 276 SKDEVS-FNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGE 334

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  +K+G +  + V  AL+ +Y  C  +  A  +    + ++ V WN ML  F + D
Sbjct: 335 QLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLD 394

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              ++ + FR++Q  G  P+Q    + +     +G L  G+++H   IK GF  ++ + +
Sbjct: 395 NLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCS 454

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAK   ++    +   +T  D +SWT +I+GYAQ+N   +AL+ F+ +   G+ +
Sbjct: 455 VLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQS 514

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D +   S + AC+G++ ++Q ++IH      G S DL I NA+V +Y +CG I  +   F
Sbjct: 515 DNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEF 574

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E I++KD +SW  +IS +  +G   +AL++F  MN A +E+   T  SA+SAA++++ +K
Sbjct: 575 EKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIK 634

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GK+++  II++GF+ +  V+++L+  YA+CG+++ A + F  +  K+ + W +MI    
Sbjct: 635 QGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYS 694

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG G  A++LF KM+     P+H+TF+ +L ACSH GL+ +G  + E M  ++ L P P
Sbjct: 695 QHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKP 754

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            HYAC+VDL+ RA  L  A +F+  M IEP A +W  LL AC VH N E+GE  A+ LLE
Sbjct: 755 AHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLE 814

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P +   YVL+SN++A S KW   +Q R  MR  G+KK PG SWIE+ N +H+F   D+
Sbjct: 815 LEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDR 874

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H  +D+IY+ LAE+ +K   E GY      +L++VE+E+K   +Y HSE+LAI +G+L 
Sbjct: 875 LHPLADKIYEFLAELNKK-AAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLS 933

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            ++   I + KNLRVC DCHS+ K VS++  R ++VRDA RFHHFE G+CSC DYW
Sbjct: 934 LSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 169/620 (27%), Positives = 315/620 (50%), Gaps = 4/620 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   G +    ++F+ +  R+V +W+ ++  ++      RVL+ +S M    +S    +
Sbjct: 54  VYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEIS 113

Query: 61  FPCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V++AC+  +  +    +IH  ++  G   +  I N L+ +YAK      AR++FD +
Sbjct: 114 FASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNL 173

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K D V W ++IS +S +G   EA+ LF EM   G+    Y F + L  C       +G
Sbjct: 174 CTK-DSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVG 232

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++HA   K G +L+ YV NAL+ +Y+R      A  V  ++++KD VS+NS+++G  Q 
Sbjct: 233 EQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQ 292

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A++ F +++    KPD V   + +SA    G L  G++LH+Y IK G  SD+ + 
Sbjct: 293 GFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVE 352

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+D+Y  C  +     +F     ++ + W  ++  + + +   ++  +FR +Q++GL 
Sbjct: 353 GALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLI 412

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            +     S+L  C+ +  +   ++IH  +I+ G   ++ + + ++D+Y K G +D +  +
Sbjct: 413 PNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVI 472

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
             ++   DVVSWT++IS Y  + L  EAL+ F  M    ++SD+I   SA+SA + +  L
Sbjct: 473 LRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQAL 532

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            +G++++      G++ + S+ ++LV +YARCG +  A   F  +  KD I W  +I+  
Sbjct: 533 NQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGF 592

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
              G  + A+ +F +M          TF + + A ++   I +GK+ +  M      D  
Sbjct: 593 AQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQ-IHAMIIKRGFDSD 651

Query: 599 PEHYACLVDLLGRANHLEEA 618
            E    L+    +   +E+A
Sbjct: 652 IEVSNALITFYAKCGSIEDA 671



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/579 (26%), Positives = 283/579 (48%), Gaps = 16/579 (2%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M   GI  +  T+  ++  C     L    K+HG +LK G+ +   + N LV +Y    D
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
                ++F+ M  +  V  W+ IIS +         L LF  M    +     +F + L+
Sbjct: 61  LDGVVKVFEDMPNR-SVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLR 119

Query: 169 ACEDSSFETLGM----EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
           AC   S   +G+    +IHA  +  G      ++N LI +YA+ G +  A  V   L  K
Sbjct: 120 AC---SGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTK 176

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
           DSVSW +M++GF QN    +A+  F E+  AG  P      + +S   ++     G++LH
Sbjct: 177 DSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLH 236

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
           A   K G   +  + N L+ +Y++        +VF +M ++D +S+ ++I+G AQ     
Sbjct: 237 ALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSD 296

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIV 403
            ALELF  ++ + L  D + + S+L AC+    + + +++H Y+I+ G+ SD+++  A++
Sbjct: 297 GALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALL 356

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y  C +I  +  +F + ++++VV W  M+ ++      +E+  +F  M    +  +  
Sbjct: 357 DLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQF 416

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T  S L   +S+  L  G++++  +I+ GF     V S L+DMYA+ G LD A+ +   +
Sbjct: 417 TYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL 476

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
              D++ WT++I+    H     A+  F +M       D+I F + + AC+    +N+G+
Sbjct: 477 TEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGR 536

Query: 584 KFLEIMRCDYQLDPWPEHYA---CLVDLLGRANHLEEAY 619
           +    +     +  + E  +    LV L  R   ++EAY
Sbjct: 537 Q----IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAY 571



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 250/500 (50%), Gaps = 10/500 (2%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M+  G+  N  T++  L  C +S       ++H   +K G   +  + N L+ +Y   G 
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           +     V   + N+   SW+ +++GF++  +  + +  F  +      P ++   + + A
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 271 -SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
            SG    +   +++HA  I  G +    I N L+ +YAK   +    +VF  +  +D +S
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W  +I+G++QN    +A+ LF  +   G+     +  SVL  C+ +K     +++H  + 
Sbjct: 181 WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVF 240

Query: 390 RKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           + G S +  + NA+V +Y +  N   +  VF  ++SKD VS+ S+IS     G ++ ALE
Sbjct: 241 KYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALE 300

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           LF  M    ++ D +T+ S LSA +S   L KG++L+ ++I+ G + +  V  +L+D+Y 
Sbjct: 301 LFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYV 360

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
            C  +  A+++F   QT++++LW  M+ A G       +  +F +M+ +   P+  T+ +
Sbjct: 361 NCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPS 420

Query: 569 LLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYAC--LVDLLGRANHLEEAYQFVRSM 625
           +L  C+  G ++ G++   ++++  +Q +     Y C  L+D+  +   L+ A+  +R++
Sbjct: 421 ILRTCTSVGALDLGEQIHTQVIKTGFQFNV----YVCSVLIDMYAKHGKLDTAHVILRTL 476

Query: 626 QIEPTAEVWCALLGACRVHS 645
             E     W AL+     H+
Sbjct: 477 T-EDDVVSWTALISGYAQHN 495


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 322/841 (38%), Positives = 488/841 (58%), Gaps = 8/841 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MY  CG  L++  +FD++  + +F WNA++  YV N      + T+  +  V     D F
Sbjct: 152 MYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNF 211

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFPC+IKAC    D+  G  +HG+ +K G     F+ N+++A+Y KC    +A +LFD+M
Sbjct: 212 TFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM 271

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG--LVTNAYTFVAALQACEDSSFET 177
            E ++++ WNS+I  +S +G  LEA   FR +   G  L+ +  T V  L  C       
Sbjct: 272 PE-QNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           +GM IH   VK G   ++ V NALI MY++CG ++EAA +  ++ENK  VSWNSM+  + 
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390

Query: 238 QNDLYCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +     +     R++  +    + ++V  +N + A      LL+ + LH Y+++  F   
Sbjct: 391 REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK 450

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             I N  +  YAKC  + +   VF+ M  +   SW  +I G+AQN   +KAL+ +  +  
Sbjct: 451 ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTR 510

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
            G+  D   I S+L+AC  L  +   KEIHG+++R GL  +  +  +++ +Y  C    Y
Sbjct: 511 LGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFY 570

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
            R  FE++  K+ V W +M+S Y  N L NEAL LF  M    +E D I + S L A S 
Sbjct: 571 GRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQ 630

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           LS L  GKE++ F ++     +  VA SL+DMYA+ G L  + ++FN +  K++  W  M
Sbjct: 631 LSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVM 690

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I   G+HG+G  A++LF  M+     PD  TFL +L AC H+GL++EG  +L  M+  Y+
Sbjct: 691 ITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYK 750

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           L+P  EHYAC++D+LGRA  L EA  F+  M  EP A++W +LL +   + + E+GE  A
Sbjct: 751 LEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFA 810

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           +KLL L+     +Y+L+SN++A + KW  V  VR +M+   L+K  G SWIE+  K++SF
Sbjct: 811 EKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSF 870

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           IA + S+  SDEI +K+    EK   E GY      VLH +EE EK ++L GHSE++AI 
Sbjct: 871 IAGENSNPSSDEI-RKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAIC 929

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G L + EG+ +RI+KNLR+C DCH+  K +S+   RE+V+RD  RFHHF+ G+CSCGDY
Sbjct: 930 FGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDY 989

Query: 835 W 835
           W
Sbjct: 990 W 990



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 226/425 (53%), Gaps = 7/425 (1%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANA-LIAMYARCGKMTEAAGVLYQLENKD 225
           LQ C       +G ++      S Q    +V N  LI MY+ CG   E+  V  +L NK+
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELH 284
              WN++++G+V+N+LY +A+  F EL    + +PD       + A     ++  GK +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
             A+K G + DL +GN ++ +Y KC  ++    +F +M  Q+ ISW ++I G+++N   L
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWL 293

Query: 345 KALELFRTV--QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNA 401
           +A   FR++    +GL  DV  + ++L  CSG   +     IHG  ++ GL  +L++ NA
Sbjct: 294 EAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNA 353

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF--YLMNEANVE 459
           ++D+Y KCG +  +  +F  IE+K VVSW SMI +Y   G   E  +L     M E  +E
Sbjct: 354 LIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELME 413

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            + +T+++ L A    S L   + L+G+ +R  F  +  + ++ +  YA+CG+L  A  V
Sbjct: 414 VNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHV 473

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  + TK +  W ++I  +  +G    A+D +++M      PD  + ++LL AC   GL+
Sbjct: 474 FFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533

Query: 580 NEGKK 584
             GK+
Sbjct: 534 QYGKE 538


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 322/841 (38%), Positives = 487/841 (57%), Gaps = 8/841 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MY  CG  L++  +FD++  + +F WNA++  YV N      + T+  +  V     D F
Sbjct: 152 MYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNF 211

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFPC+IKAC    D+  G  +HG+ +K G     F+ N+++A+Y KC    +A +LFD+M
Sbjct: 212 TFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM 271

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG--LVTNAYTFVAALQACEDSSFET 177
            E ++++ WNS+I  +S +G  LEA   FR +   G  L+ +  T V  L  C       
Sbjct: 272 PE-QNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           +GM IH   VK G   ++ V NALI MY++CG ++EAA +  ++ENK  VSWNSM+  + 
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390

Query: 238 QNDLYCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +     +     R++  +    + ++V  +N + A      LL+ + LH Y+++  F   
Sbjct: 391 REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK 450

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             I N  +  YAKC  + +   VF+ M  +   SW  +I G+AQN   +KAL+ +  +  
Sbjct: 451 ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTR 510

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
            G+  D   I S+L+AC  L  +   KEIHG+++R GL  +  +  +++ +Y  C    Y
Sbjct: 511 LGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFY 570

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
            R  FE +  K+ V W +M+S Y  N L NEAL LF  M    +E D I + S L A S 
Sbjct: 571 GRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQ 630

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           LS L  GKE++ F ++     +  VA SL+DMYA+ G L  + ++FN +  K++  W  M
Sbjct: 631 LSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVM 690

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I   G+HG+G  A++LF  M+     PD  TFL +L AC H+GL++EG  +L  M+  Y+
Sbjct: 691 ITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYK 750

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           L+P  EHYAC++D+LGRA  L EA  F+  M  EP A++W +LL +   + + E+GE  A
Sbjct: 751 LEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFA 810

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           +KLL L+     +Y+L+SN++A + KW  V  VR +M+   L+K  G SWIE+  K++SF
Sbjct: 811 EKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSF 870

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           IA + S+  SDEI +K+    EK   E GY      VLH +EE EK ++L GHSE++AI 
Sbjct: 871 IAGENSNPSSDEI-RKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAIC 929

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G L + EG+ +RI+KNLR+C DCH+  K +S+   RE+V+RD  RFHHF+ G+CSCGDY
Sbjct: 930 FGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDY 989

Query: 835 W 835
           W
Sbjct: 990 W 990



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 226/425 (53%), Gaps = 7/425 (1%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANA-LIAMYARCGKMTEAAGVLYQLENKD 225
           LQ C       +G ++      S Q    +V N  LI MY+ CG   E+  V  +L NK+
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELH 284
              WN++++G+V+N+LY +A+  F EL    + +PD       + A     ++  GK +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
             A+K G + DL +GN ++ +Y KC  ++    +F +M  Q+ ISW ++I G+++N   L
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWL 293

Query: 345 KALELFRTV--QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNA 401
           +A   FR++    +GL  DV  + ++L  CSG   +     IHG  ++ GL  +L++ NA
Sbjct: 294 EAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNA 353

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF--YLMNEANVE 459
           ++D+Y KCG +  +  +F  IE+K VVSW SMI +Y   G   E  +L     M E  +E
Sbjct: 354 LIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELME 413

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            + +T+++ L A    S L   + L+G+ +R  F  +  + ++ +  YA+CG+L  A  V
Sbjct: 414 VNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHV 473

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  + TK +  W ++I  +  +G    A+D +++M      PD  + ++LL AC   GL+
Sbjct: 474 FFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533

Query: 580 NEGKK 584
             GK+
Sbjct: 534 QYGKE 538


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 305/841 (36%), Positives = 499/841 (59%), Gaps = 10/841 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y +C     A  +FD++      +W++++ AY +NG P   L  +  MR  G+  + F 
Sbjct: 46  LYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFA 105

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR-- 118
            P V+K CA   D+  GA++H L +        F+ N+LVA+Y       +AR++FD   
Sbjct: 106 LPVVLK-CA--PDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYV 162

Query: 119 -MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            +G + + V WN++ISAY  + Q  +A+G+FREM   G   N + F   + AC  S    
Sbjct: 163 GVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLE 222

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G ++H A V++G    V+ ANAL+ MY++ G +  AA V  ++   D VSWN+ ++G V
Sbjct: 223 AGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCV 282

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            +    +A++   +++ +G  P+     + + A    G    G+++H + +K     D  
Sbjct: 283 THGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEF 342

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +   L+DMYAK   ++   +VF  M  +D I W  +I+G + +  H + L LF  ++ EG
Sbjct: 343 VAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEG 402

Query: 358 LDADV--MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
           LD DV    + SVL + +  + +  T+++H    + GL SD  ++N ++D Y KCG +DY
Sbjct: 403 LDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDY 462

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +  VF+   S D++S T+M+++        +A++LF  M    +E DS  L S L+A +S
Sbjct: 463 AIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTS 522

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           LS  ++GK+++  +I++ F  +    ++LV  YA+CG+++ A+  F+ +  + ++ W++M
Sbjct: 523 LSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAM 582

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I     HG GK A+DLF++M  E  AP+HIT  ++L AC+H+GL+++ KK+ E M+  + 
Sbjct: 583 IGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFG 642

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           +D   EHYAC++D+LGRA  LE+A + V +M  +  A VW ALLGA RVH + ELG + A
Sbjct: 643 IDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAA 702

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           +KL  L+P   G +VL++N +A++  W ++ +VR  M+ S +KK P  SW+EI +K+H+F
Sbjct: 703 EKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTF 762

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           I  DKSH  + +IY KLAE+ + L  + GYV   +  LH+V+  EK  +L  HSERLA+A
Sbjct: 763 IVGDKSHPMTRDIYGKLAELGD-LMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVA 821

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           + ++ +  G+ IR+ KNLR+C DCH   K +S++  RE+++RD NRFHHF  G CSCGDY
Sbjct: 822 FALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDY 881

Query: 835 W 835
           W
Sbjct: 882 W 882



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 178/618 (28%), Positives = 317/618 (51%), Gaps = 27/618 (4%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           + L  GA +H  +LK G  +     N L+ +Y++C     AR +FD + +   V  W+S+
Sbjct: 18  RSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDEIPDPCHVS-WSSL 74

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           ++AYS +G   +AL  FR M+  G+  N +     L+   D  F   G ++HA  V +  
Sbjct: 75  VTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRF---GAQVHALAVATRL 131

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQL----ENKDSVSWNSMLTGFVQNDLYCKAMQ 247
              V+VANAL+A+Y   G + EA  +  +       +++VSWN+M++ +V+ND    A+ 
Sbjct: 132 VHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIG 191

Query: 248 FFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
            FRE+  +G++P++    C VNA + S    +L  G+++H   ++ G+  D+   N L+D
Sbjct: 192 VFREMVWSGERPNEFGFSCVVNACTGS---RDLEAGRQVHGAVVRTGYEKDVFTANALVD 248

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           MY+K   +     VF +M A D +SW   I+G   +    +ALEL   ++  GL  +V  
Sbjct: 249 MYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFT 308

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL--VILNAIVDVYGKCGNIDYSRNVFESI 422
           + SVL AC+G    +  ++IHG+++ K ++D    +   +VD+Y K G +D +R VF+ +
Sbjct: 309 LSSVLKACAGAGAFNLGRQIHGFMV-KAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFM 367

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD--SITLVSALSAASSLSILKK 480
             +D++ W ++IS   H+G   E L LF+ M +  ++ D    TL S L + +S   +  
Sbjct: 368 PRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICH 427

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
            ++++    + G   +  V + L+D Y +CG LD A KVF   ++ D+I  T+M+ A   
Sbjct: 428 TRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQ 487

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWP 599
              G+ AI LF +M  +   PD     +LL AC+      +GK+    +++  +  D + 
Sbjct: 488 CDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFA 547

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            +   LV    +   +E+A      +  E     W A++G    H + +    +  ++  
Sbjct: 548 GN--ALVYAYAKCGSIEDADMAFSGLP-ERGIVSWSAMIGGLAQHGHGKRALDLFHRM-- 602

Query: 660 LDPGNPGNYVLISNVFAA 677
           LD G   N++ +++V +A
Sbjct: 603 LDEGVAPNHITLTSVLSA 620



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 204/409 (49%), Gaps = 27/409 (6%)

Query: 269 SASGRLG---NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           SA  R G   +L  G  LH++ +K G ++     N L+ +Y++C   +    VF ++   
Sbjct: 9   SALARFGTSRSLFAGAHLHSHLLKSGLLAGFS--NHLLTLYSRCRLPSAARAVFDEIPDP 66

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
             +SW++++  Y+ N     AL  FR ++  G+  +   +  VL     ++  +Q   + 
Sbjct: 67  CHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRFGAQVHAL- 125

Query: 386 GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI----ESKDVVSWTSMISSYVHNG 441
             +  + + D+ + NA+V VYG  G +D +R +F+        ++ VSW +MIS+YV N 
Sbjct: 126 -AVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKND 184

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
            + +A+ +F  M  +    +       ++A +    L+ G++++G ++R G+  +   A+
Sbjct: 185 QSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTAN 244

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           +LVDMY++ G +++A  VF  +   D++ W + I+    HG    A++L  +M++    P
Sbjct: 245 ALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVP 304

Query: 562 DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC-LVDLLGRANHLEEAYQ 620
           +  T  ++L AC+ +G  N G++    M     +  + E  A  LVD+  +   L++A +
Sbjct: 305 NVFTLSSVLKACAGAGAFNLGRQIHGFMV--KAVADFDEFVAVGLVDMYAKHGFLDDARK 362

Query: 621 FVRSMQIEPTAE--VWCALLGACRVHSNKELGEIVA------KKLLELD 661
               M   P  +  +W AL+  C  H  +  GE+++      K+ L+LD
Sbjct: 363 VFDFM---PRRDLILWNALISGCS-HDGRH-GEVLSLFHRMRKEGLDLD 406



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 156/360 (43%), Gaps = 39/360 (10%)

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIES 424
           IGS L      + +     +H ++++ GL      N ++ +Y +C     +R VF+ I  
Sbjct: 7   IGSALARFGTSRSLFAGAHLHSHLLKSGLL-AGFSNHLLTLYSRCRLPSAARAVFDEIPD 65

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
              VSW+S++++Y +NG+  +AL  F  M    V  +   L   L  A     ++ G ++
Sbjct: 66  PCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---VRFGAQV 122

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN----CVQTKDLILWTSMINANGL 540
           +   +      +  VA++LV +Y   G +D A ++F+        ++ + W +MI+A   
Sbjct: 123 HALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVK 182

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWP 599
           + +   AI +F +M      P+   F  ++ AC+ S  +  G++    ++R  Y+ D + 
Sbjct: 183 NDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFT 242

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV--WCALLGACRVHSNKELGEIVAKKL 657
            +   LVD+  +   +E A      M   P A+V  W A +  C  H +        + L
Sbjct: 243 AN--ALVDMYSKLGDIEMAATVFEKM---PAADVVSWNAFISGCVTHGHDHRA---LELL 294

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           L++         L+ NVF  S               S LK   G+    +G +IH F+ +
Sbjct: 295 LQMKSSG-----LVPNVFTLS---------------SVLKACAGAGAFNLGRQIHGFMVK 334


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 305/846 (36%), Positives = 499/846 (58%), Gaps = 15/846 (1%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y +CG + DA ++FD +  R   +WN+M+G   SNG     ++ +S+M   G  + + T
Sbjct: 248  VYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVT 307

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGY----DSTDFIVNS------LVAMYAKCYDFR 110
               V+ ACA L     G  +HG  +K G     DS    ++       LV MY KC D  
Sbjct: 308  VLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMA 367

Query: 111  KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
             AR++FD M  K +V +WN I+  Y+  G+  E+L LF +M  +G+  + +     L+  
Sbjct: 368  SARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCI 427

Query: 171  EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
               S    G+  H   VK G   Q  V NALI+ YA+   + +A  V  ++  +D++SWN
Sbjct: 428  TCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWN 487

Query: 231  SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
            S+++G   N L  +A++ F  +   GQ+ D V  ++ + A  +      G+ +H Y++K 
Sbjct: 488  SVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKT 547

Query: 291  GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
            G + +  + N L+DMY+ C       ++F  M  ++ +SWT +I  Y +     K   L 
Sbjct: 548  GLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLL 607

Query: 351  RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKC 409
            + + L+G+  DV  + S L A +G + + Q K +HGY IR G+  L+ + NA++++Y KC
Sbjct: 608  QEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKC 667

Query: 410  GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
             N++ +R +F+ + +KDV+SW ++I  Y  N   NE+  LF  M       +++T+   L
Sbjct: 668  RNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDM-LLQFRPNAVTMTCIL 726

Query: 470  SAASSLSILKKGKELNGFIIRKGFNLEGSVAS-SLVDMYARCGALDIANKVFNCVQTKDL 528
             AA+S+S L++G+E++ + +R+GF LE S AS +LVDMY +CGAL +A  +F+ +  K+L
Sbjct: 727  PAAASISSLERGREIHAYALRRGF-LEDSYASNALVDMYVKCGALLVARVLFDRLTKKNL 785

Query: 529  ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
            I WT MI   G+HG GK AI LF +M      PD  +F A+LYAC HSGL  EG++F + 
Sbjct: 786  ISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKA 845

Query: 589  MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
            M+ +Y+++P  +HY C+VDLL R   L+EA +F+ SM IEP + +W +LL  CR+H N +
Sbjct: 846  MQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVK 905

Query: 649  LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
            L E VA K+ +L+P N G YVL++N++A + +W+ V++++ ++ G GL++  G SWIE+ 
Sbjct: 906  LAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVR 965

Query: 709  NKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHS 768
            +K+H FIA +++H + + I + L ++  ++ +E G+  + ++ L   ++    + L GHS
Sbjct: 966  SKVHVFIADNRNHPDWNRIAEFLDDVARRMRQE-GHDPKKKYALMGADDAVHDEALCGHS 1024

Query: 769  ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
             +LA+A+GVL   EG  IR+TKN +VC  CH   K +S++  RE+++RD++RFH FE G 
Sbjct: 1025 SKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGR 1084

Query: 829  CSCGDY 834
            CSC  Y
Sbjct: 1085 CSCRGY 1090



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 175/601 (29%), Positives = 306/601 (50%), Gaps = 22/601 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRT--VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           Y KCG + +A  +FD +  +   V  W +++ AY   G+    +  + +M+  G+S DA 
Sbjct: 146 YLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAH 205

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              CV+K  + L  L  G  IHGL+ K G      + N+L+A+Y++C     A ++FD M
Sbjct: 206 AVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSM 265

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               D + WNS+I    ++G    A+ LF +M   G   ++ T ++ L AC    +  +G
Sbjct: 266 -HPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIG 324

Query: 180 MEIHAATVKSG-----QNLQVYVANA-----LIAMYARCGKMTEAAGVLYQLENKDSVS- 228
             +H  +VKSG      ++Q  + +A     L+ MY +CG M  A  V   + +K +V  
Sbjct: 325 KAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHV 384

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ---VCTVNAVSASGRLGNLLNGKELHA 285
           WN ++ G+ +   + +++  F ++   G  PD+    C +  ++    L    +G   H 
Sbjct: 385 WNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITC---LSCARDGLVAHG 441

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
           Y +K GF +   + N L+  YAK   +     VF +M  QD ISW ++I+G + N  + +
Sbjct: 442 YIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSE 501

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVD 404
           A+ELF  +  +G + D + + SVL AC+  +     + +HGY ++ GL  +  + NA++D
Sbjct: 502 AIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLD 561

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
           +Y  C +   +  +F S+  K+VVSWT+MI+SY+  GL ++   L   M    +  D   
Sbjct: 562 MYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFA 621

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
           + SAL A +    LK+GK ++G+ IR G      VA++L++MY +C  ++ A  +F+ V 
Sbjct: 622 VTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVT 681

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            KD+I W ++I     +     +  LF  M  + F P+ +T   +L A +    +  G++
Sbjct: 682 NKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGRE 740

Query: 585 F 585
            
Sbjct: 741 I 741



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 170/554 (30%), Positives = 275/554 (49%), Gaps = 19/554 (3%)

Query: 49  MRVLGI--SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDST----DFIVNSLVAM 102
           +R+LG    VD  ++  V++ C   + L+   + H L+      +T      +   LV  
Sbjct: 86  LRLLGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLA 145

Query: 103 YAKCYDFRKARQLFDRMGEKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAY 161
           Y KC D  +AR +FD M  +  DV +W S++SAY+ +G   EA+ LFR+MQ  G+  +A+
Sbjct: 146 YLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAH 205

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
                L+        T G  IH    K G      VANALIA+Y+RCG+M +AA V   +
Sbjct: 206 AVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSM 265

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             +D++SWNSM+ G   N  +  A+  F ++   G +   V  ++ + A   LG  L GK
Sbjct: 266 HPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGK 325

Query: 282 ELHAYAIKQGF----------VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-W 330
            +H Y++K G           + D  +G+ L+ MY KC  +    RVF  M+++  +  W
Sbjct: 326 AVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVW 385

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
             I+ GYA+     ++L LF  +   G+  D   I  +L   + L C       HGYI++
Sbjct: 386 NLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVK 445

Query: 391 KGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
            G  +   + NA++  Y K   I  +  VF  +  +D +SW S+IS    NGL +EA+EL
Sbjct: 446 LGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIEL 505

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           F  M     E DS+TL+S L A +       G+ ++G+ ++ G   E S+A++L+DMY+ 
Sbjct: 506 FIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSN 565

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           C      N++F  +  K+++ WT+MI +    G       L  +M  +   PD     + 
Sbjct: 566 CSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSA 625

Query: 570 LYACSHSGLINEGK 583
           L+A +    + +GK
Sbjct: 626 LHAFAGDESLKQGK 639


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 302/774 (39%), Positives = 472/774 (60%), Gaps = 4/774 (0%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++AC   K L    KIH   LK   ++   +++ L  +Y  C     AR+LFD +    
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI-PNP 72

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            V+LWN II AY+ +G    A+ L+  M  +G+  N YT+   L+AC        G+EIH
Sbjct: 73  SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           +     G    V+V  AL+  YA+CG + EA  +   + ++D V+WN+M+ G     L  
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
            A+Q   ++Q  G  P+    V  +   G    L +GK LH Y +++ F + + +G  L+
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLL 252

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL-EGLDADV 362
           DMYAKC C+ Y  ++F  M  ++ +SW+ +I GY  ++C  +ALELF  + L + +D   
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTP 312

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFES 421
           + +GSVL AC+ L  +S+ +++H YII+ G + D+++ N ++ +Y KCG ID +   F+ 
Sbjct: 313 VTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDE 372

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  KD VS+++++S  V NG A  AL +F +M  + ++ D  T++  L A S L+ L+ G
Sbjct: 373 MNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG 432

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
              +G++I +GF  +  + ++L+DMY++CG +  A +VFN +   D++ W +MI   G+H
Sbjct: 433 FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIH 492

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G G  A+ LF+ + A    PD ITF+ LL +CSHSGL+ EG+ + + M  D+ + P  EH
Sbjct: 493 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEH 552

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
             C+VD+LGRA  ++EA+ F+R+M  EP   +W ALL ACR+H N ELGE V+KK+  L 
Sbjct: 553 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 612

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
           P + GN+VL+SN+++A+ +W D   +R+  +  GLKK PG SWIEI   +H+F+  D+SH
Sbjct: 613 PESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSH 672

Query: 722 SESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKST 781
            +  +I +KL E+  +++R  GY A+  FV  +VEEEEK Q+L  HSE+LAIA+G+L   
Sbjct: 673 LQLSQINRKLEELLVEMKRL-GYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLK 731

Query: 782 EGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            G  I +TKNLRVC DCH+  K ++ +  RE+ VRDANRFHHF+ G C+CGD+W
Sbjct: 732 AGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 183/575 (31%), Positives = 312/575 (54%), Gaps = 9/575 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  C  V+ A +LFD++   +V  WN ++ AY  NG     ++ Y  M  LG+  + +T
Sbjct: 52  LYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYT 111

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P V+KAC+ L  ++ G +IH      G +S  F+  +LV  YAKC    +A++LF  M 
Sbjct: 112 YPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS 171

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV WN++I+  S  G C +A+ L  +MQ  G+  N+ T V  L    ++     G 
Sbjct: 172 HR-DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGK 230

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   V+   +  V V   L+ MYA+C  +  A  +   +  ++ VSW++M+ G+V +D
Sbjct: 231 ALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASD 290

Query: 241 LYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +A++ F ++       P  V   + + A  +L +L  G++LH Y IK G V D+ +G
Sbjct: 291 CMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLG 350

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           NTL+ MYAKC  ++   R F +M  +D +S++ I++G  QN     AL +FR +QL G+D
Sbjct: 351 NTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGID 410

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D+  +  VL ACS L  +      HGY+I +G  +D +I NA++D+Y KCG I ++R V
Sbjct: 411 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 470

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  ++  D+VSW +MI  Y  +GL  EAL LF+ +    ++ D IT +  LS+ S   ++
Sbjct: 471 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 530

Query: 479 KKGKELNGFIIRKGFNLEGSVAS--SLVDMYARCGALDIANK-VFNCVQTKDLILWTSMI 535
            +G+ L    + + F++   +     +VD+  R G +D A+  + N     D+ +W++++
Sbjct: 531 MEGR-LWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALL 589

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           +A  +H   ++  ++  K+  +S  P+      LL
Sbjct: 590 SACRIHKNIELGEEVSKKI--QSLGPESTGNFVLL 622



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 221/423 (52%), Gaps = 2/423 (0%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
            ++  L+AC  S   T   +IH   +K+  N    V + L  +Y  C ++  A  +  ++
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
            N   + WN ++  +  N  +  A+  +  +   G +P++      + A   L  + +G 
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           E+H++A   G  SD+ +   L+D YAKC  +    R+F  M+ +D ++W  +IAG +   
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILN 400
               A++L   +Q EG+  +   I  VL      K +   K +HGY +R+   + +V+  
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVE 459
            ++D+Y KC  + Y+R +F+ +  ++ VSW++MI  YV +    EALELF  ++ +  ++
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
              +TL S L A + L+ L +G++L+ +II+ G  L+  + ++L+ MYA+CG +D A + 
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F+ +  KD + ++++++    +G   VA+ +F  M+     PD  T L +L ACSH   +
Sbjct: 370 FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 580 NEG 582
             G
Sbjct: 430 QHG 432


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 302/774 (39%), Positives = 472/774 (60%), Gaps = 4/774 (0%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++AC   K L    KIH   LK   ++   +++ L  +Y  C     AR+LFD +    
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI-PNP 72

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            V+LWN II AY+ +G    A+ L+  M  +G+  N YT+   L+AC        G+EIH
Sbjct: 73  SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           +     G    V+V  AL+  YA+CG + EA  +   + ++D V+WN+M+ G     L  
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
            A+Q   ++Q  G  P+    V  +   G    L +GK LH Y +++ F + + +G  L+
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLL 252

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL-EGLDADV 362
           DMYAKC C+ Y  ++F  M  ++ +SW+ +I GY  ++C  +ALELF  + L + +D   
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTP 312

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFES 421
           + +GSVL AC+ L  +S+ +++H YII+ G + D+++ N ++ +Y KCG ID +   F+ 
Sbjct: 313 VTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDX 372

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  KD VS+++++S  V NG A  AL +F +M  + ++ D  T++  L A S L+ L+ G
Sbjct: 373 MNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG 432

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
              +G++I +GF  +  + ++L+DMY++CG +  A +VFN +   D++ W +MI   G+H
Sbjct: 433 FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIH 492

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G G  A+ LF+ + A    PD ITF+ LL +CSHSGL+ EG+ + + M  D+ + P  EH
Sbjct: 493 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEH 552

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
             C+VD+LGRA  ++EA+ F+R+M  EP   +W ALL ACR+H N ELGE V+KK+  L 
Sbjct: 553 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 612

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
           P + GN+VL+SN+++A+ +W D   +R+  +  GLKK PG SWIEI   +H+F+  D+SH
Sbjct: 613 PESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSH 672

Query: 722 SESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKST 781
            +  +I +KL E+  +++R  GY A+  FV  +VEEEEK Q+L  HSE+LAIA+G+L   
Sbjct: 673 LQLSQINRKLEELLVEMKRL-GYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLK 731

Query: 782 EGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            G  I +TKNLRVC DCH+  K ++ +  RE+ VRDANRFHHF+ G C+CGD+W
Sbjct: 732 AGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 183/575 (31%), Positives = 311/575 (54%), Gaps = 9/575 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  C  V+ A +LFD++   +V  WN ++ AY  NG     ++ Y  M  LG+  + +T
Sbjct: 52  LYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYT 111

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P V+KAC+ L  ++ G +IH      G +S  F+  +LV  YAKC    +A++LF  M 
Sbjct: 112 YPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS 171

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV WN++I+  S  G C +A+ L  +MQ  G+  N+ T V  L    ++     G 
Sbjct: 172 HR-DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGK 230

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   V+   +  V V   L+ MYA+C  +  A  +   +  ++ VSW++M+ G+V +D
Sbjct: 231 ALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSD 290

Query: 241 LYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +A++ F ++       P  V   + + A  +L +L  G++LH Y IK G V D+ +G
Sbjct: 291 CMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLG 350

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           NTL+ MYAKC  ++   R F  M  +D +S++ I++G  QN     AL +FR +QL G+D
Sbjct: 351 NTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGID 410

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D+  +  VL ACS L  +      HGY+I +G  +D +I NA++D+Y KCG I ++R V
Sbjct: 411 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 470

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  ++  D+VSW +MI  Y  +GL  EAL LF+ +    ++ D IT +  LS+ S   ++
Sbjct: 471 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 530

Query: 479 KKGKELNGFIIRKGFNLEGSVAS--SLVDMYARCGALDIANK-VFNCVQTKDLILWTSMI 535
            +G+ L    + + F++   +     +VD+  R G +D A+  + N     D+ +W++++
Sbjct: 531 MEGR-LWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALL 589

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           +A  +H   ++  ++  K+  +S  P+      LL
Sbjct: 590 SACRIHKNIELGEEVSKKI--QSLGPESTGNFVLL 622



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 221/423 (52%), Gaps = 2/423 (0%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
            ++  L+AC  S   T   +IH   +K+  N    V + L  +Y  C ++  A  +  ++
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
            N   + WN ++  +  N  +  A+  +  +   G +P++      + A   L  + +G 
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           E+H++A   G  SD+ +   L+D YAKC  +    R+F  M+ +D ++W  +IAG +   
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILN 400
               A++L   +Q EG+  +   I  VL      K +   K +HGY +R+   + +V+  
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVE 459
            ++D+Y KC  + Y+R +F+ +  ++ VSW++MI  YV +    EALELF  ++ +  ++
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
              +TL S L A + L+ L +G++L+ +II+ G  L+  + ++L+ MYA+CG +D A + 
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F+ +  KD + ++++++    +G   VA+ +F  M+     PD  T L +L ACSH   +
Sbjct: 370 FDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 580 NEG 582
             G
Sbjct: 430 QHG 432


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 303/781 (38%), Positives = 478/781 (61%), Gaps = 5/781 (0%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D   +  +++ CA  K +  G ++  ++   G      +   LV MY KC D ++ R +F
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           D++ E + + LWN +IS YS SG   E++ LF++M  +G+  N+YTF + L+     +  
Sbjct: 209 DKLSESK-IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARV 267

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G ++H    K G N    V N+LI+ Y    K+  A  +  +L ++D +SWNSM++G+
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGY 327

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS-D 295
           V+N L  + ++ F ++   G   D    VN   A   +G LL GK LH+Y+IK   +  +
Sbjct: 328 VKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDRE 387

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           ++  NTL+DMY+KC  +N   RVF +M  +  +SWT++I GY +      A++LF  ++ 
Sbjct: 388 VRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKS 447

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
            G+  DV  + S+L AC+    +   K +H YI    L ++  + NA+ D+Y KCG++  
Sbjct: 448 RGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKD 507

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           + +VF  ++ KDV+SW +MI  Y  N L NEAL LF  M   + + D  T+   L A +S
Sbjct: 508 AHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACAS 566

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L+ L KG+E++G+ +R G++ +  V +++VDMY +CG L +A  +F+ +  KDL+ WT M
Sbjct: 567 LAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVM 626

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I   G+HG G  AI+ F +M      PD ++F+++LYACSHSGL++EG K   IM+ + Q
Sbjct: 627 IAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQ 686

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           ++P  EHYAC+VDLL R  +L +A++F+++M I+P A +W ALL  CR+H + +L E VA
Sbjct: 687 IEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVA 746

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           +++ EL+P N G YVL++N++A + KW++V+++R ++   GLKK PG SWIEI  KI+ F
Sbjct: 747 ERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIF 806

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           +A D S  ++ +I   L  +  K++ E GY  +T + L N +E EK   L GHSE+LA+A
Sbjct: 807 VAGDCSKPQAKKIELLLKRLRSKMKEE-GYSPKTAYALLNADEREKEVALCGHSEKLAMA 865

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G+L    G  IR+TKNLRVC DCH   K +S+   RE+++RD++RFHHF+ G CSC  Y
Sbjct: 866 FGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGY 925

Query: 835 W 835
           W
Sbjct: 926 W 926



 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 189/580 (32%), Positives = 320/580 (55%), Gaps = 13/580 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +   +FDK+S+  +F WN M+  Y  +G     +  + +M  LGI  +++T
Sbjct: 194 MYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYT 253

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++K  A +  ++ G ++HGL+ K G++S + +VNSL++ Y      R A++LFD + 
Sbjct: 254 FSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELT 313

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ DV+ WNS+IS Y  +G     + +F +M   G+  +  T V    AC +     LG 
Sbjct: 314 DR-DVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK 372

Query: 181 EIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +H+ ++K+   + +V   N L+ MY++CG +  A  V  +++ K  VSW SM+TG+V+ 
Sbjct: 373 VLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVRE 432

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L   A++ F E++  G  PD     + ++A    GNL +GK +H Y  +    ++  + 
Sbjct: 433 GLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVS 492

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L DMYAKC  +     VF  M  +D ISW T+I GY +N+   +AL LF  +Q E   
Sbjct: 493 NALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-K 551

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            D   +  +L AC+ L  + + +EIHGY +R G S D  + NA+VD+Y KCG +  +R++
Sbjct: 552 PDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSL 611

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ I +KD+VSWT MI+ Y  +G  +EA+  F  M    +E D ++ +S L A S   +L
Sbjct: 612 FDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLL 671

Query: 479 KKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
            +G ++   I++K   +E ++   + +VD+ AR G L  A+K    +  K D  +W +++
Sbjct: 672 DEGWKIFN-IMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALL 730

Query: 536 NANGLHGRGKVA---IDLFYKMEAESFAPDHITFLALLYA 572
               +H   K+A    +  +++E E+    +   LA +YA
Sbjct: 731 CGCRIHHDVKLAEKVAERIFELEPENTG--YYVLLANIYA 768



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 2/151 (1%)

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I  +   G    A+EL  L +  N   D     S L   +    ++ G+ +   I   G 
Sbjct: 124 IVEFCEVGDLKNAMEL--LCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGV 181

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
            ++G +   LV MY +CG L     VF+ +    + LW  MI+     G    +I+LF +
Sbjct: 182 MIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQ 241

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKK 584
           M      P+  TF ++L   +    + EG++
Sbjct: 242 MLELGIKPNSYTFSSILKCFAAVARVEEGRQ 272


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 305/825 (36%), Positives = 487/825 (59%), Gaps = 16/825 (1%)

Query: 15  FDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDL 74
           F   +       NA +  +   G+    +E  ++ +   + ++++    V++ CA  K L
Sbjct: 53  FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLNSYC--SVLQLCAEKKSL 110

Query: 75  DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
           + G ++H +++  G    + +   LV MY  C D  + R++FD++   + V LWN ++S 
Sbjct: 111 EDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI-MNDKVFLWNLLMSE 169

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM-----EIHAATVKS 189
           Y+  G   E++ LF++MQ++G+V N YTF   L+      F  LG       +H   +K 
Sbjct: 170 YAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKC-----FAALGKVKECKRVHGYVLKL 224

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G      V N+LIA Y + G +  A  +  +L   D VSWNSM+ G V N      ++ F
Sbjct: 225 GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIF 284

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            ++   G + D    V+ + A   +GNL  G+ LH + +K  F  ++   NTL+DMY+KC
Sbjct: 285 IQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKC 344

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             +N    VF +M     +SWT+IIA Y +   +  A+ LF  +Q +G+  D+  + S++
Sbjct: 345 GNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIV 404

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            AC+    + + +++H Y+I+ G+ S+L + NA++++Y KCG+++ +R VF  I  KD+V
Sbjct: 405 HACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIV 464

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           SW +MI  Y  N L NEALELF  M +   + D IT+   L A + L+ L KG+E++G I
Sbjct: 465 SWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHI 523

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           +R+G+  +  VA +LVDMYA+CG L +A  +F+ +  KDLI WT MI   G+HG G  AI
Sbjct: 524 LRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAI 583

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
             F +M      PD  +F A+L ACSHSGL+NEG KF   MR +  ++P  EHYAC+VDL
Sbjct: 584 STFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDL 643

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
           L R  +L +AY+F+ SM I+P   +W  LL  CR+H + +L E VA+ + EL+P N   Y
Sbjct: 644 LARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYY 703

Query: 669 VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
           V+++NV+A + KW++V+++R RM+  G K+ PG SWIE+G K + F+A +  H ++ +I 
Sbjct: 704 VVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKID 763

Query: 729 KKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRI 788
             L+++T +++ E  Y +  ++VL N ++ EK  +  GHSE+ A+A+G+L    G  +R+
Sbjct: 764 VLLSKLTMQMQNE-DYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRV 822

Query: 789 TKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
           +KN RVC DCH   K +S+    E+V+RD+NRFHHF+ G+CSC D
Sbjct: 823 SKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867



 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 188/550 (34%), Positives = 298/550 (54%), Gaps = 5/550 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG ++   ++FDK+    VF WN ++  Y   G     +  + +M+ LG+  + +T
Sbjct: 138 MYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYT 197

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F CV+K  A L  +    ++HG VLK G+ S   +VNSL+A Y K      A  LFD + 
Sbjct: 198 FTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS 257

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  DVV WNS+I+    +G     L +F +M  +G+  +  T V+ L AC +    +LG 
Sbjct: 258 E-PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGR 316

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   VK+  + +V  +N L+ MY++CG +  A  V  ++ +   VSW S++  +V+  
Sbjct: 317 ALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREG 376

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           LY  A+  F E+Q  G +PD     + V A     +L  G+++H+Y IK G  S+L + N
Sbjct: 377 LYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTN 436

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++MYAKC  V     VF ++  +D +SW T+I GY+QN    +ALELF  +Q +    
Sbjct: 437 ALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKP 495

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D + +  VL AC+GL  + + +EIHG+I+R+G  SDL +  A+VD+Y KCG +  ++ +F
Sbjct: 496 DDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLF 555

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + I  KD++SWT MI+ Y  +G  NEA+  F  M  A +E D  +  + L+A S   +L 
Sbjct: 556 DMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLN 615

Query: 480 KG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           +G K  N      G   +    + +VD+ AR G L  A K    +  K D  +W  +++ 
Sbjct: 616 EGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 675

Query: 538 NGLHGRGKVA 547
             +H   K+A
Sbjct: 676 CRIHHDVKLA 685


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 297/841 (35%), Positives = 490/841 (58%), Gaps = 12/841 (1%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y +CG + DA Q+FD +  R   +WN+ +  Y SNG   R ++ +S+M   G  + + T
Sbjct: 242  LYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVT 301

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGY--------DSTDFIVNS-LVAMYAKCYDFRK 111
               V+ ACA L     G  +HG  +K G            D  + S LV MY KC D   
Sbjct: 302  VLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGS 361

Query: 112  ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
            AR++FD M  K +V +WN I+  Y+ + +  E+L LF +M  +G+  + +     L+   
Sbjct: 362  ARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCIT 421

Query: 172  DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
              S    G+  H   VK G   Q  V NALI+ YA+   +  A  V  ++ ++D++SWNS
Sbjct: 422  CLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNS 481

Query: 232  MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
            +++G   N L  +A++ F  +   G + D    ++ + A  R      G+ +H Y++K G
Sbjct: 482  VISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTG 541

Query: 292  FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
             + +  + N L+DMY+ C   +   ++F  M  ++ +SWT +I  Y +     K   L +
Sbjct: 542  LIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQ 601

Query: 352  TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCG 410
             + L+G+  DV  + SVL   +G + + Q K +HGY IR G+  L+ + NA++++Y  C 
Sbjct: 602  EMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCR 661

Query: 411  NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            N++ +R VF+ + +KD++SW ++I  Y  N  ANE+  LF  M     + +++T+   L 
Sbjct: 662  NMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDM-LLQFKPNTVTMTCILP 720

Query: 471  AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
            A +S+S L++G+E++ + +R+GF  +   +++LVDMY +CGAL +A  +F+ +  K+LI 
Sbjct: 721  AVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLIS 780

Query: 531  WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
            WT MI   G+HG GK A+ LF +M      PD  +F A+LYAC HSGL  EG KF   MR
Sbjct: 781  WTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMR 840

Query: 591  CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
             +Y+++P  +HY C+VDLL    +L+EA++F+ SM IEP + +W +LL  CR+H + +L 
Sbjct: 841  KEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLA 900

Query: 651  EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
            E VA ++ +L+P N G YVL++N++A + +W+ V++++ ++ G GL++  G SWIE+  K
Sbjct: 901  EKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGK 960

Query: 711  IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSER 770
            +H FIA +++H E + I + L  +  ++ RE G+  + ++ L    +    + L GHS +
Sbjct: 961  VHVFIADNRNHPEWNRIAEFLDHVARRM-REEGHDPKKKYSLMGANDAVHDEALCGHSSK 1019

Query: 771  LAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCS 830
            LA+ +GVL   EG  IR+TKN +VC  CH   K +S++  RE+++RD++RFHHFE G CS
Sbjct: 1020 LAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCS 1079

Query: 831  C 831
            C
Sbjct: 1080 C 1080



 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 178/600 (29%), Positives = 305/600 (50%), Gaps = 21/600 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRT--VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           Y KCG +  A  +FD++  R   V  W +++ AY   G+    +  + +M+  G+S DA 
Sbjct: 140 YLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAH 199

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              CV+K  A L  +  G  IHGL+ K G      + N+L+A+Y++C     A Q+FD M
Sbjct: 200 AVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSM 259

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               D + WNS IS Y ++G    A+ LF +M   G   ++ T ++ L AC +  FE +G
Sbjct: 260 -HARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVG 318

Query: 180 MEIHAATVKSG-----QNLQVYVANA----LIAMYARCGKMTEAAGVLYQLENKDSVS-W 229
             +H  ++KSG     +++Q  +  A    L+ MY +CG M  A  V   + +K +V  W
Sbjct: 319 KVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVW 378

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ---VCTVNAVSASGRLGNLLNGKELHAY 286
           N ++ G+ +   + +++  F ++   G  PD+    C +  ++    L    +G   H Y
Sbjct: 379 NLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITC---LSCARDGLVAHGY 435

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            +K GF +   + N L+  YAK   ++    VF +M  QD ISW ++I+G   N  + +A
Sbjct: 436 LVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEA 495

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDV 405
           +ELF  + ++G + D   + SVL AC+        + +HGY ++ GL  +  + NA++D+
Sbjct: 496 IELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDM 555

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y  C +   +  +F ++  K+VVSWT+MI+SY   GL ++   L   M    ++ D   +
Sbjct: 556 YSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAV 615

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S L   +    LK+GK ++G+ IR G      VA++L++MY  C  ++ A  VF+ V  
Sbjct: 616 TSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTN 675

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           KD+I W ++I     +     +  LF  M  + F P+ +T   +L A +    +  G++ 
Sbjct: 676 KDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREI 734



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 168/554 (30%), Positives = 275/554 (49%), Gaps = 23/554 (4%)

Query: 49  MRVLGI--SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-----LVA 101
           +R+LG    V   ++  V++ C   + L+   + H LV       T  I+ S     LV 
Sbjct: 83  LRLLGSDGGVGVRSYCAVVQLCGEERSLEAARRAHALVRA----GTGGIIGSVLGKRLVL 138

Query: 102 MYAKCYDFRKARQLFDRMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
            Y KC D   AR +FD M  +  DV +W S++SAY+ +G   E + LFR+MQ  G+  +A
Sbjct: 139 AYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDA 198

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
           +     L+        T G  IH    K G      VANALIA+Y+RCG M +A  V   
Sbjct: 199 HAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDS 258

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +  +D++SWNS ++G+  N  + +A+  F ++   G +   V  ++ + A   LG  L G
Sbjct: 259 MHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVG 318

Query: 281 KELHAYAIKQGFVSDLQ---------IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-W 330
           K +H Y++K G + DL+         +G+ L+ MY KC  +    RVF  M ++  +  W
Sbjct: 319 KVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVW 378

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
             I+ GYA+     ++L LF  +   G+  D   +  +L   + L C       HGY+++
Sbjct: 379 NLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVK 438

Query: 391 KGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
            G  +   + NA++  Y K   ID +  VF+ +  +D +SW S+IS    NGL +EA+EL
Sbjct: 439 LGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIEL 498

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           F  M     E DS TL+S L A +       G+ ++G+ ++ G   E S+A++L+DMY+ 
Sbjct: 499 FVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSN 558

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           C      N++F  +  K+++ WT+MI +    G       L  +M  +   PD     ++
Sbjct: 559 CSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSV 618

Query: 570 LYACSHSGLINEGK 583
           L+  +    + +GK
Sbjct: 619 LHGFAGDESLKQGK 632


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 304/825 (36%), Positives = 484/825 (58%), Gaps = 16/825 (1%)

Query: 15   FDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDL 74
            F   +       NA +  +   G+    +E  ++ +   + ++++    V++ CA  K L
Sbjct: 328  FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLNSYC--SVLQLCAEKKSL 385

Query: 75   DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
            + G ++H +++  G    + +   LV MY  C D  + R++FD++   + V LWN ++S 
Sbjct: 386  EDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI-MNDKVFLWNLLMSE 444

Query: 135  YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM-----EIHAATVKS 189
            Y+  G   E++ LF++MQ++G+V N YTF   L+      F  LG       +H   +K 
Sbjct: 445  YAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKC-----FAALGKVKECKRVHGYVLKL 499

Query: 190  GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
            G      V N+LIA Y + G +  A  +  +L   D VSWNSM+ G V N      ++ F
Sbjct: 500  GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIF 559

Query: 250  RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
             ++   G + D    V+ + A   +GNL  G+ LH + +K  F  ++   NTL+DMY+KC
Sbjct: 560  IQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKC 619

Query: 310  CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
              +N    VF +M     +SWT+ IA Y +   +  A+ LF  +Q +G+  D+  + S++
Sbjct: 620  GNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIV 679

Query: 370  MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
             AC+    + + +++H Y+I+ G+ S+L + NA++++Y KCG+++ +R VF  I  KD+V
Sbjct: 680  HACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIV 739

Query: 429  SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
            SW +MI  Y  N L NEALELF  M +   + D IT+   L A + L+ L KG+E++G I
Sbjct: 740  SWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHI 798

Query: 489  IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
            +R+G+  +  VA +LVDMYA+CG L +A  +F+ +  KDLI WT MI   G+HG G  AI
Sbjct: 799  LRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAI 858

Query: 549  DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
              F +M      PD  +F  +L ACSHSGL+NEG KF   MR +  ++P  EHYAC+VDL
Sbjct: 859  STFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDL 918

Query: 609  LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
            L R  +L +AY+F+ SM I+P   +W  LL  CR+H + +L E VA+ + EL+P N   Y
Sbjct: 919  LARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYY 978

Query: 669  VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
            V+++NV+A + KW++V+++R RM+  G K+ PG SWIE+G K + F+A +  H ++  I 
Sbjct: 979  VVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRID 1038

Query: 729  KKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRI 788
              L ++T +++ E  Y +  ++VL N ++ EK  +  GHSE+ A+A+G+L    G  +R+
Sbjct: 1039 VLLRKLTMQMQNE-DYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRV 1097

Query: 789  TKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
            +KN RVC DCH   K +S+   RE+V+RD+NRFHHF+ G+CSC D
Sbjct: 1098 SKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142



 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 187/550 (34%), Positives = 296/550 (53%), Gaps = 5/550 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG ++   ++FDK+    VF WN ++  Y   G     +  + +M+ LG+  + +T
Sbjct: 413 MYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYT 472

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F CV+K  A L  +    ++HG VLK G+ S   +VNSL+A Y K      A  LFD + 
Sbjct: 473 FTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS 532

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  DVV WNS+I+    +G     L +F +M  +G+  +  T V+ L A  +    +LG 
Sbjct: 533 EP-DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGR 591

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   VK+  + +V  +N L+ MY++CG +  A  V  ++ +   VSW S +  +V+  
Sbjct: 592 ALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREG 651

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           LY  A+  F E+Q  G +PD     + V A     +L  G+++H+Y IK G  S+L + N
Sbjct: 652 LYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTN 711

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++MYAKC  V     VF ++  +D +SW T+I GY+QN+   +ALELF  +Q +    
Sbjct: 712 ALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKP 770

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D + +  VL AC+GL  + + +EIHG+I+R+G  SDL +  A+VD+Y KCG +  ++ +F
Sbjct: 771 DDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLF 830

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + I  KD++SWT MI+ Y  +G  NEA+  F  M  A +E D  +    L+A S   +L 
Sbjct: 831 DMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLN 890

Query: 480 KG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           +G K  N      G   +    + +VD+ AR G L  A K    +  K D  +W  +++ 
Sbjct: 891 EGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 950

Query: 538 NGLHGRGKVA 547
             +H   K+A
Sbjct: 951 CRIHHDVKLA 960


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 318/845 (37%), Positives = 493/845 (58%), Gaps = 12/845 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAF 59
           MY  CGS  D+  +FD + ++ +F WNA++ +Y  N     VLE + +M    G+  D F
Sbjct: 126 MYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNF 185

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFPCV+KACA + ++  G  +HGLV+K       F+ N+LV+ Y        A ++F  M
Sbjct: 186 TFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIM 245

Query: 120 GEKEDVVLWNSIISAYSASG---QCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSF 175
            E+ ++V WNS+I  +S +G   +C   LG   E    +    +  T    L  C     
Sbjct: 246 PER-NLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDRE 304

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             +G  +H   +K   + +V V NAL+ MY++CG + +A  +     NK+ VSWN+M+ G
Sbjct: 305 IGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGG 364

Query: 236 FVQNDLYCKAMQFFRE-LQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           F       K     R+ L G G  + D+V  +NAV        L N KELH Y++KQ FV
Sbjct: 365 FSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFV 424

Query: 294 SDLQ-IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            + + + N  +  YAKC  ++Y  RVF  + ++   SW  +I GY+Q++    +L+ +  
Sbjct: 425 HNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQ 484

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGN 411
           ++  GL  D+  + S+L ACS +K +   KE+HG IIR  L  D  +  +++ +Y  CG 
Sbjct: 485 MKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGE 544

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           +  +  +F+++E K +VSW +M++ Y+ NG    AL LF  M    V+   I+++S   A
Sbjct: 545 LSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGA 604

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            S L  L+ G+E +G+ ++        +A S++DMYA+ G++  + KVFN ++ + +  W
Sbjct: 605 CSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASW 664

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            +M+   G+HGR K AI LF +M+     PD +TFL +L AC+HSGL++EG  +L+ M+ 
Sbjct: 665 NAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKT 724

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQF-VRSMQIEPTAEVWCALLGACRVHSNKELG 650
            + ++P  +HYAC++D+L RA  L+EA +     M  EP   +W  LL +CR+H N E+G
Sbjct: 725 LFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMG 784

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
           E +A KL   +P  P NYVL+SN++A S KW +V +VR RM+   L+K  G SWIE+  K
Sbjct: 785 EKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGK 844

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSER 770
           + SF+A + S    +EI K L  + E+   + GY   T  V H++ EEEK + L GHSE+
Sbjct: 845 VFSFVAGESSLDGFEEI-KSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEK 903

Query: 771 LAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCS 830
           LAI YG+++++EG+ +R+ KNLR+CVDCH+  KL+S++  RE+VVRD  RFHHF+ G CS
Sbjct: 904 LAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCS 963

Query: 831 CGDYW 835
           CGDYW
Sbjct: 964 CGDYW 968



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 161/550 (29%), Positives = 274/550 (49%), Gaps = 18/550 (3%)

Query: 40  LRVLETYSRMRVLGISVDAFTFPCVI-----KACAMLKDLDCGAKIHGLVLKCGYDSTDF 94
           L+V+E + R      S DAF           +A    KD+  G KIH LV +    S D 
Sbjct: 60  LQVIEEFDREE--KSSSDAFLLLREALGLLLQASGRRKDIQLGRKIHQLVSESARLSNDD 117

Query: 95  IV-NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM-Q 152
           ++   ++ MY+ C     +R +FD +  K+++  WN++IS+YS +      L +F +M  
Sbjct: 118 VLCTRVITMYSMCGSPDDSRSVFDAL-RKKNLFQWNAVISSYSRNELYHNVLEMFVKMIT 176

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
             GL+ + +TF   ++AC   S   +G+ +H   VK+     V+V+NAL++ Y   G ++
Sbjct: 177 ESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVS 236

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK----PDQVCTVNAV 268
           +A  V   +  ++ VSWNSM+  F  N L  +      ++     +    PD       +
Sbjct: 237 DALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVL 296

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
               R   +  GK +H  A+K     ++ + N LMDMY+KC C+N    +F     ++ +
Sbjct: 297 PVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVV 356

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEG--LDADVMIIGSVLMACSGLKCMSQTKEIHG 386
           SW T++ G++      K  +L R +   G  L AD + I + +  C     +   KE+H 
Sbjct: 357 SWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHC 416

Query: 387 YIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           Y +++    ++ ++ NA V  Y KCG++ Y+  VF SI SK V SW ++I  Y  +    
Sbjct: 417 YSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPR 476

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
            +L+ ++ M  + +  D  T+ S LSA S +  LK GKE++G IIR     +  V  SL+
Sbjct: 477 LSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLL 536

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
            +Y  CG L  A+ +F+ ++ K L+ W +M+N    +G  + A+ LF +M      P  I
Sbjct: 537 SLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEI 596

Query: 565 TFLALLYACS 574
           + +++  ACS
Sbjct: 597 SMMSVFGACS 606



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 211/418 (50%), Gaps = 12/418 (2%)

Query: 178 LGMEIHAATVKSGQ--NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           LG +IH    +S +  N  V +   +I MY+ CG   ++  V   L  K+   WN++++ 
Sbjct: 99  LGRKIHQLVSESARLSNDDV-LCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISS 157

Query: 236 FVQNDLYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
           + +N+LY   ++ F + +  +G  PD       V A   +  +  G  +H   +K   V 
Sbjct: 158 YSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVE 217

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN----NCHLKALELF 350
           D+ + N L+  Y     V+   RVF  M  ++ +SW ++I  ++ N     C L   ++ 
Sbjct: 218 DVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMM 277

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
                     DV  + +VL  C+  + +   K +HG  ++  L  ++V+ NA++D+Y KC
Sbjct: 278 EKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKC 337

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF--YLMNEANVESDSITLVS 467
           G I+ ++ +F+   +K+VVSW +M+  +   G  ++  +L    L    ++ +D +T+++
Sbjct: 338 GCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILN 397

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGS-VASSLVDMYARCGALDIANKVFNCVQTK 526
           A+      S+L   KEL+ + +++ F      VA++ V  YA+CG+L  A++VF  +++K
Sbjct: 398 AVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSK 457

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            +  W ++I         ++++D +++M++    PD  T  +LL ACS    +  GK+
Sbjct: 458 TVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKE 515


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 321/839 (38%), Positives = 483/839 (57%), Gaps = 18/839 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MY  CGS  D+   FD +  + +F WNA++ +Y  N     VLE + +M     +  D F
Sbjct: 129 MYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNF 188

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFPCVIKACA + D+  G  +HGLV+K G     F+ N+LV+ Y        A +LFD M
Sbjct: 189 TFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIM 248

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E+ ++V WNS+I  +S +G      G F        + +  T V  L  C       +G
Sbjct: 249 PER-NLVSWNSMIRVFSDNGDD----GAF--------MPDVATVVTVLPVCAREREIGVG 295

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   VK   + ++ V NAL+ MY++ G + ++  +     NK+ VSWN+M+ GF   
Sbjct: 296 KGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAE 355

Query: 240 DLYCKAMQFFRELQGAGQ--KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
                     R++    +  K D+V  +NAV        L + KELH Y++KQ FV D  
Sbjct: 356 GDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDEL 415

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N  +  YAKC  ++Y  RVF+ + ++   SW  +I GYAQ++    +L+    ++  G
Sbjct: 416 LANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSG 475

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           L  D   + S+L ACS LK +   KE+HG+IIR  L  DL +  +++ +Y  CG +   +
Sbjct: 476 LLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQ 535

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F+++E   +VSW ++I+ ++ NG    AL LF  M    ++   I++++   A S L 
Sbjct: 536 VLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLP 595

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L+ G+E + + ++        +A S++DMYA+ GA+  ++KVFN ++ K    W +MI 
Sbjct: 596 SLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIM 655

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
             G+HGR K AI LF +M+     PD +TFL +L AC+HSGL++EG ++L+ M+  + L 
Sbjct: 656 GYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLK 715

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  +HYAC++D+LGRA  L+ A +    M  EP   +W +LL  CR+H N E+GE VA K
Sbjct: 716 PNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAK 775

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L  L+P  P NYVL+SN++A   KW DV QVR RM+   L+K  G SWIE+  K+ SF+ 
Sbjct: 776 LFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVV 835

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            ++     +EI K L  I E    + GY   T  V H++ EEEK++ L GHSE+LAI YG
Sbjct: 836 GERFLDGFEEI-KSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYG 894

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++K++EG+ +R+ KNLR+CVDCH+  KL+S++  RE+VVRD  RFHHF  G CSCGDYW
Sbjct: 895 LIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 256/517 (49%), Gaps = 20/517 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVL-KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           +++A    KD++ G KIH LV       S D +   ++ MYA C     +R  FD +  K
Sbjct: 90  LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGME 181
            ++  WN++IS+YS +    E L +F +M  +  L+ + +TF   ++AC   S   +G+ 
Sbjct: 150 -NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLA 208

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   VK+G    ++V NAL++ Y   G +++A  +   +  ++ VSWNSM+  F  N  
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG- 267

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
                            PD    V  +    R   +  GK +H +A+K     +L + N 
Sbjct: 268 -----------DDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNA 316

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY-AQNNCHLKALELFRTVQL--EGL 358
           LMDMY+K  C+     +F     ++ +SW T++ G+ A+ + H    +L R +    E +
Sbjct: 317 LMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIH-GTFDLLRQMLAGSEDV 375

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRN 417
            AD + I + +  C     +   KE+H Y +++  + D ++ NA V  Y KCG++ Y++ 
Sbjct: 376 KADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQR 435

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  I SK + SW ++I  Y  +     +L+    M  + +  D+ T+ S LSA S L  
Sbjct: 436 VFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKS 495

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L+ GKE++GFIIR     +  V  S++ +Y  CG L     +F+ ++   L+ W ++I  
Sbjct: 496 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITG 555

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +  +G  + A+ LF +M      P  I+ + +  ACS
Sbjct: 556 HLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACS 592



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 196/388 (50%), Gaps = 16/388 (4%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ-FFRELQGAGQKP 259
           +I MYA CG   ++      L +K+   WN++++ + +N+LY + ++ F + +      P
Sbjct: 126 IITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLP 185

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D       + A   + ++  G  +H   +K G V DL +GN L+  Y     V+   ++F
Sbjct: 186 DNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLF 245

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
             M  ++ +SW ++I  ++ N                    DV  + +VL  C+  + + 
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNG------------DDGAFMPDVATVVTVLPVCAREREIG 293

Query: 380 QTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             K +HG+ ++  L  +LV+ NA++D+Y K G I  S+ +F+   +K+VVSW +M+  + 
Sbjct: 294 VGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFS 353

Query: 439 HNGLANEALELF--YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
             G  +   +L    L    +V++D +T+++A+      S+L   KEL+ + +++ F  +
Sbjct: 354 AEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYD 413

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             +A++ V  YA+CG+L  A +VF+ +++K L  W ++I         ++++D   +M+ 
Sbjct: 414 ELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKN 473

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKK 584
               PD+ T  +LL ACS    +  GK+
Sbjct: 474 SGLLPDNFTVCSLLSACSKLKSLRLGKE 501



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 24/246 (9%)

Query: 350 FRTVQ-LEGLD---ADVMII-----GSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVI 398
           FR VQ   G D   +DV ++     G +L A    K +   ++IH  +    +  SD V+
Sbjct: 63  FRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVL 122

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNEAN 457
              I+ +Y  CG+ D SR+ F+++ SK++  W ++ISSY  N L +E LE+F  ++++ +
Sbjct: 123 CTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTH 182

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           +  D+ T    + A + +S +  G  ++G +++ G   +  V ++LV  Y   G +  A 
Sbjct: 183 LLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDAL 242

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           K+F+ +  ++L+ W SMI     +G            +  +F PD  T + +L  C+   
Sbjct: 243 KLFDIMPERNLVSWNSMIRVFSDNG------------DDGAFMPDVATVVTVLPVCARER 290

Query: 578 LINEGK 583
            I  GK
Sbjct: 291 EIGVGK 296


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 311/826 (37%), Positives = 510/826 (61%), Gaps = 8/826 (0%)

Query: 14  LFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           +F +VS  + V+ WN+++ A+  NG   + LE Y ++R   +S D +TFP VIKACA L 
Sbjct: 61  VFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D + G  ++  +L+ G++S  ++ N+LV MY++     +ARQ+FD M  + D+V WNS+I
Sbjct: 121 DAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR-DLVSWNSLI 179

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           S YS+ G   EAL ++ E++   +V +++T  + L A  +      G  +H  T+KSG N
Sbjct: 180 SGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVN 239

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
               V N L+AMY +  + T+A  V  ++  +DSV++N+M+ G+++ ++  ++++ F  L
Sbjct: 240 SVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF--L 297

Query: 253 QGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           +   Q KPD +   + + A G L +L   K ++ Y ++ GFV +  + N L+D+YAKC  
Sbjct: 298 ENLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGD 357

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           +     VF  M  +D +SW +II+GY Q+   ++A++LF+ + +    AD +    ++  
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISL 417

Query: 372 CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
            + L  +   K +H   I+ G+  DL + NA++D+Y KCG +  S  +F S+ + D V+W
Sbjct: 418 STRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTW 477

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
            ++IS+ V  G     L++   M +  V  D  T +  L   +SL+  + GKE++  ++R
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR 537

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
            G+  E  + ++L++MY++CG L+ + +VF  +  +D++ WT MI A G++G G+ A++ 
Sbjct: 538 FGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALES 597

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLG 610
           F  ME     PD + F+AL+YACSHSGL+ +G    E M+  Y++DP  EHYAC+VDLL 
Sbjct: 598 FVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLS 657

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVL 670
           R+  + +A +F+++M IEP A +W ++L ACR   + E  E V+++++EL+P +PG  +L
Sbjct: 658 RSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSIL 717

Query: 671 ISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKK 730
            SN +AA RKW  V  +R  +R   +KK PG SWIEIG K+H F + D S  +S+ I+K 
Sbjct: 718 ASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKS 777

Query: 731 LAEITEKLEREGGYVAQTQFVLHNV-EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRIT 789
           L EI   L  + GY+  ++ V  N+ EEEEK +++ GHSERLAIA+G+L +  G+ +++ 
Sbjct: 778 L-EILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVM 836

Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           KNLRVC DCH   KL+S++ GRE++VRDANRFH F+ G+CSC D W
Sbjct: 837 KNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 176/607 (28%), Positives = 320/607 (52%), Gaps = 17/607 (2%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           +IH LV+  G D +DF    L+  Y+       +  +F R+   ++V +WNSII A+S +
Sbjct: 25  RIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKN 84

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G   +AL  + +++   +  + YTF + ++AC       +G  ++   ++ G    +YV 
Sbjct: 85  GWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVG 144

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           NAL+ MY+R G ++ A  V  ++  +D VSWNS+++G+  +  Y +A++ + EL+ +   
Sbjct: 145 NALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIV 204

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           PD     + + A   L  +  G+ LH + +K G  S   + N L+ MY K        RV
Sbjct: 205 PDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRV 264

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD---ADVMIIGSVLMACSGL 375
           F +M  +D +++ T+I GY +     +++++F    LE LD    D++ + SVL AC  L
Sbjct: 265 FDEMVVRDSVTYNTMICGYLKLEMVEESVKMF----LENLDQFKPDILTVTSVLCACGHL 320

Query: 376 KCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           + +S  K I+ Y++R G   +  + N ++DVY KCG++  +R+VF S+E KD VSW S+I
Sbjct: 321 RDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSII 380

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           S Y+ +G   EA++LF +M     ++D IT +  +S ++ L+ LK GK L+   I+ G  
Sbjct: 381 SGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIY 440

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
           ++ SV+++L+DMYA+CG +  + K+FN + T D + W ++I+A    G     + +  +M
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQM 500

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRAN 613
                 PD  TFL  L  C+       GK+    ++R  Y+ +   +    L+++  +  
Sbjct: 501 RKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESE--LQIGNALIEMYSKCG 558

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGN--PGNYVLI 671
            LE +++    M        W  ++ A  ++     GE   +  ++++     P + V I
Sbjct: 559 CLESSFRVFERMSRRDVV-TWTGMIYAYGMYGE---GEKALESFVDMEKSGIVPDSVVFI 614

Query: 672 SNVFAAS 678
           + ++A S
Sbjct: 615 ALIYACS 621



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 167/542 (30%), Positives = 281/542 (51%), Gaps = 9/542 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + G +  A Q+FD++  R + +WN+++  Y S+G     LE Y  +R   I  D+FT
Sbjct: 150 MYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFT 209

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ A A L  +  G  +HG  LK G +S   + N L+AMY K      AR++FD M 
Sbjct: 210 VSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMV 269

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V +N++I  Y       E++ +F E        +  T  + L AC      +L  
Sbjct: 270 VR-DSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAK 327

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            I+   +++G  L+  V N LI +YA+CG M  A  V   +E KD+VSWNS+++G++Q+ 
Sbjct: 328 YIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSG 387

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +AM+ F+ +    ++ D +  +  +S S RL +L  GK LH+  IK G   DL + N
Sbjct: 388 DLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSN 447

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  V    ++F  M   D ++W T+I+   +       L++   ++   +  
Sbjct: 448 ALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVP 507

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D+      L  C+ L      KEIH  ++R G  S+L I NA++++Y KCG ++ S  VF
Sbjct: 508 DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVF 567

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  +DVV+WT MI +Y   G   +ALE F  M ++ +  DS+  ++ + A S   +++
Sbjct: 568 ERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVE 627

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           KG  L  F  ++  + ++  +   + +VD+ +R   +  A +    +  + D  +W S++
Sbjct: 628 KG--LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVL 685

Query: 536 NA 537
            A
Sbjct: 686 RA 687


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 310/849 (36%), Positives = 496/849 (58%), Gaps = 34/849 (4%)

Query: 18   VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCG 77
            V +R+   W  +L +   +      + TY+ M       D F FP V+KA A + DL  G
Sbjct: 290  VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349

Query: 78   AKIHGLVLKCGY--DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
             +IH  V K G+   S+  + NSLV MY KC D   ARQ+FD + ++ D V WNS+I+  
Sbjct: 350  KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDR-DHVSWNSMIATL 408

Query: 136  SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED-SSFETLGMEIHAATVKSGQNLQ 194
                +   +L LFR M    +   ++T V+   AC        LG ++HA T+++G +L+
Sbjct: 409  CRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLR 467

Query: 195  VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
             Y  NAL+ MYAR G++ +A  +    + KD VSWN++++   QND + +A+ +   +  
Sbjct: 468  TYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIV 527

Query: 255  AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVN 313
             G +PD V   + + A  +L  L  G+E+H YA++ G  + +  +G  L+DMY  C    
Sbjct: 528  DGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPK 587

Query: 314  YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMAC 372
                VF  +  +    W  ++AGYA+N    +AL LF  +  E     +     SVL AC
Sbjct: 588  KGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPAC 647

Query: 373  SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
               K  S  + IHGYI+++G   D  + NA++D+Y + G ++ S+ +F  +  +D+VSW 
Sbjct: 648  VRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWN 707

Query: 432  SMISSYVHNGLANEALELFYLMNEANVE------------------SDSITLVSALSAAS 473
            +MI+  +  G  ++AL L + M     E                   +S+TL++ L   +
Sbjct: 708  TMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCA 767

Query: 474  SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            +L+ L KGKE++ + +++   ++ +V S+LVDMYA+CG L++A++VF+ +  +++I W  
Sbjct: 768  ALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNV 827

Query: 534  MINANGLHGRGKVAIDLFYKMEA------ESFAPDHITFLALLYACSHSGLINEGKKFLE 587
            +I A G+HG+G+ A++LF  M A      E   P+ +T++A+  ACSHSG+++EG     
Sbjct: 828  LIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFH 887

Query: 588  IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE-PTAEVWCALLGACRVHSN 646
             M+  + ++P  +HYACLVDLLGR+  ++EAY+ + +M       + W +LLGACR+H +
Sbjct: 888  TMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQS 947

Query: 647  KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
             E GEI AK L  L+P    +YVL+SN+++++  W     VR +M+  G++K PG SWIE
Sbjct: 948  VEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIE 1007

Query: 707  IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
             G+++H F++ D SH +S E+++ L  +++++ +EG YV     VLHNV++EEK  ML G
Sbjct: 1008 HGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEG-YVPDISCVLHNVDDEEKETMLCG 1066

Query: 767  HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
            HSERLAIA+G+L +  G+ IR+ KNLRVC DCH   K++S++  RE+++RD  RFHHF  
Sbjct: 1067 HSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFAN 1126

Query: 827  GVCSCGDYW 835
            G CSCGDYW
Sbjct: 1127 GTCSCGDYW 1135



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 293/615 (47%), Gaps = 40/615 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG +  A Q+FD +  R   +WN+M+       E    L  +  M    +   +FT
Sbjct: 376 MYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFT 435

Query: 61  FPCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V  AC+ ++  +  G ++H   L+ G D   +  N+LV MYA+      A+ LF   
Sbjct: 436 LVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVF 494

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K D+V WN++IS+ S + +  EAL     M   G+  +  T  + L AC       +G
Sbjct: 495 DGK-DLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIG 553

Query: 180 MEIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            EIH   +++G  ++  +V  AL+ MY  C +  +   V   +  +    WN++L G+ +
Sbjct: 554 REIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYAR 613

Query: 239 NDLYCKAMQFFRELQGAGQK-PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           N+   +A++ F E+    +  P+     + + A  R     + + +H Y +K+GF  D  
Sbjct: 614 NEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKY 673

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL-- 355
           + N LMDMY++   V     +F +M  +D +SW T+I G      +  AL L   +Q   
Sbjct: 674 VQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQ 733

Query: 356 --EGLDADV--------------MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
             +G D  V              + + +VL  C+ L  + + KEIH Y +++ L+ D+ +
Sbjct: 734 GEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAV 793

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM----- 453
            +A+VD+Y KCG ++ +  VF+ +  ++V++W  +I +Y  +G   EALELF +M     
Sbjct: 794 GSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGG 853

Query: 454 -NEANVESDSITLVSALSAASSLSILKKGKEL-NGFIIRKGFNLEGSVASSLVDMYARCG 511
            N   +  + +T ++  +A S   ++ +G  L +      G    G   + LVD+  R G
Sbjct: 854 SNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSG 913

Query: 512 ALDIANKVFNCVQT--KDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITF 566
            +  A ++ N + +    +  W+S++ A  +H     G++A    + +E       H   
Sbjct: 914 RVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPN--VASHYVL 971

Query: 567 LALLYACSHSGLINE 581
           ++ +Y  S +GL ++
Sbjct: 972 MSNIY--SSAGLWDQ 984



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 243/527 (46%), Gaps = 51/527 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + G V DA+ LF     + + +WN ++ +   N      L     M V G+  D  T
Sbjct: 477 MYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVT 536

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+ L+ L  G +IH   L+ G      F+  +LV MY  C   +K R +FD +
Sbjct: 537 LASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGV 596

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETL 178
             +  V +WN++++ Y+ +    +AL LF EM        NA TF + L AC      + 
Sbjct: 597 -VRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSD 655

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
              IH   VK G     YV NAL+ MY+R G++  +  +  ++  +D VSWN+M+TG + 
Sbjct: 656 KEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIV 715

Query: 239 NDLYCKAMQFFRELQ------------------GAGQKPDQVCTVNAVSASGRLGNLLNG 280
              Y  A+    E+Q                  G   KP+ V  +  +     L  L  G
Sbjct: 716 CGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKG 775

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           KE+HAYA+KQ    D+ +G+ L+DMYAKC C+N   RVF QM  ++ I+W  +I  Y  +
Sbjct: 776 KEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMH 835

Query: 341 NCHLKALELFRTVQLEG------LDADVMIIGSVLMACS-------GLKCMSQTKEIHGY 387
               +ALELFR +   G      +  + +   ++  ACS       GL      K  HG 
Sbjct: 836 GKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGV 895

Query: 388 IIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIES--KDVVSWTSMISS-YVHNGLAN 444
             R           +VD+ G+ G +  +  +  ++ S    V +W+S++ +  +H  +  
Sbjct: 896 EPRGDH-----YACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEF 950

Query: 445 ---EALELFYLMNEANVESDSITLVSALSAA----SSLSILKKGKEL 484
               A  LF L  E NV S  + + +  S+A     +L + KK KE+
Sbjct: 951 GEIAAKHLFVL--EPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEM 995


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 321/836 (38%), Positives = 488/836 (58%), Gaps = 11/836 (1%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
            MY  CGS  D+  +FD +  + +F WNA++ +Y  N     VLET+  M     +  D F
Sbjct: 484  MYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHF 543

Query: 60   TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
            T+PCVIKACA + D+  G  +HGLV+K G     F+ N+LV+ Y        A QLFD M
Sbjct: 544  TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 603

Query: 120  GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV----GLVTNAYTFVAALQACEDSSF 175
             E+ ++V WNS+I  +S +G   E+  L  EM         + +  T V  L  C     
Sbjct: 604  PER-NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 662

Query: 176  ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              LG  +H   VK   + ++ + NAL+ MY++CG +T A  +     NK+ VSWN+M+ G
Sbjct: 663  IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 722

Query: 236  FVQNDLYCKAMQFFRELQGAGQ--KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            F             R++   G+  K D+V  +NAV        L + KELH Y++KQ FV
Sbjct: 723  FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 782

Query: 294  SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
             +  + N  +  YAKC  ++Y  RVF+ + ++   SW  +I G+AQ+N    +L+    +
Sbjct: 783  YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 842

Query: 354  QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
            ++ GL  D   + S+L ACS LK +   KE+HG+IIR  L  DL +  +++ +Y  CG +
Sbjct: 843  KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 902

Query: 413  DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
               + +F+++E K +VSW ++I+ Y+ NG  + AL +F  M    ++   I+++    A 
Sbjct: 903  CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 962

Query: 473  SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
            S L  L+ G+E + + ++     +  +A SL+DMYA+ G++  ++KVFN ++ K    W 
Sbjct: 963  SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 1022

Query: 533  SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
            +MI   G+HG  K AI LF +M+     PD +TFL +L AC+HSGLI+EG ++L+ M+  
Sbjct: 1023 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 1082

Query: 593  YQLDPWPEHYACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGE 651
            + L P  +HYAC++D+LGRA  L++A + V   M  E    +W +LL +CR+H N E+GE
Sbjct: 1083 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 1142

Query: 652  IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
             VA KL EL+P  P NYVL+SN++A   KW+DV +VR RM    L+K  G SWIE+  K+
Sbjct: 1143 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKV 1202

Query: 712  HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
             SF+  ++     +EI K L  I E    + GY   T  V H++ EEEK++ L GHSE+L
Sbjct: 1203 FSFVVGERFLDGFEEI-KSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKL 1261

Query: 772  AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
            A+ YG++K++EG+ IR+ KNLR+CVDCH+  KL+S++  RE+VVRD  RFHHF+ G
Sbjct: 1262 ALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 257/520 (49%), Gaps = 10/520 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVL-KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           +++A    KD++ G KIH LV       + D +   ++ MYA C     +R +FD +  K
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGME 181
            ++  WN++IS+YS +    E L  F EM     L+ + +T+   ++AC   S   +G+ 
Sbjct: 505 -NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 563

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   VK+G    V+V NAL++ Y   G +T+A  +   +  ++ VSWNSM+  F  N  
Sbjct: 564 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 623

Query: 242 YCKAMQFFREL---QGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
             ++     E+    G G   PD    V  +    R   +  GK +H +A+K     +L 
Sbjct: 624 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 683

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N LMDMY+KC C+     +F     ++ +SW T++ G++         ++ R +   G
Sbjct: 684 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 743

Query: 358 LD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDY 414
            D  AD + I + +  C     +   KE+H Y +++  + + ++ NA V  Y KCG++ Y
Sbjct: 744 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 803

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           ++ VF  I SK V SW ++I  +  +     +L+    M  + +  DS T+ S LSA S 
Sbjct: 804 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 863

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L  L+ GKE++GFIIR     +  V  S++ +Y  CG L     +F+ ++ K L+ W ++
Sbjct: 864 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 923

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           I     +G    A+ +F +M         I+ + +  ACS
Sbjct: 924 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 963



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 201/392 (51%), Gaps = 8/392 (2%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KP 259
           +I MYA CG   ++  V   L +K+   WN++++ + +N+LY + ++ F E+       P
Sbjct: 481 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 540

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D       + A   + ++  G  +H   +K G V D+ +GN L+  Y     V    ++F
Sbjct: 541 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 600

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD----ADVMIIGSVLMACSGL 375
             M  ++ +SW ++I  ++ N    ++  L   +  E  D     DV  + +VL  C+  
Sbjct: 601 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 660

Query: 376 KCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           + +   K +HG+ ++  L  +LV+ NA++D+Y KCG I  ++ +F+   +K+VVSW +M+
Sbjct: 661 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 720

Query: 435 SSYVHNGLANEALELFYLM--NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
             +   G  +   ++   M     +V++D +T+++A+      S L   KEL+ + +++ 
Sbjct: 721 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 780

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           F     VA++ V  YA+CG+L  A +VF+ +++K +  W ++I  +      ++++D   
Sbjct: 781 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 840

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           +M+     PD  T  +LL ACS    +  GK+
Sbjct: 841 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 872



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 125/250 (50%), Gaps = 16/250 (6%)

Query: 350 FRTVQL------EGLDADVMI---IGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVI 398
           FRTVQ          DA +++   +G +L A    K +   ++IH  +    +  +D V+
Sbjct: 418 FRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL 477

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNEAN 457
              I+ +Y  CG+ D SR VF+++ SK++  W ++ISSY  N L +E LE F  +++  +
Sbjct: 478 CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTD 537

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           +  D  T    + A + +S +  G  ++G +++ G   +  V ++LV  Y   G +  A 
Sbjct: 538 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 597

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE----SFAPDHITFLALLYAC 573
           ++F+ +  ++L+ W SMI     +G  + +  L  +M  E    +F PD  T + +L  C
Sbjct: 598 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 657

Query: 574 SHSGLINEGK 583
           +    I  GK
Sbjct: 658 AREREIGLGK 667


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 308/763 (40%), Positives = 470/763 (61%), Gaps = 14/763 (1%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H L++  G   ++FI   LV +YA   D   +R  FD++ +++DV  WNS+ISAY  +
Sbjct: 94  RLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQI-QRKDVYTWNSMISAYVRN 152

Query: 139 GQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETL--GMEIHAATVKSGQNLQV 195
           G   EA+  F ++  V     + YTF   L+AC+     TL  G +IH    K G    V
Sbjct: 153 GHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ-----TLVDGRKIHCWVFKLGFQWDV 207

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           +VA +LI MY+R G +  A  +   +  +D  SWN+M++G +QN    +A+    E++  
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           G   D V   + +    +LG++     +H Y IK G   +L + N L++MYAK   +   
Sbjct: 268 GINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDA 327

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
            +VF QM  +D +SW +IIA Y QN+  + A   F  +QL GL+ D++ + S+    +  
Sbjct: 328 QKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQS 387

Query: 376 KCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +    ++ +HG+I+R+G  +  +VI NA++D+Y K G ID +  VF  I  KDVVSW ++
Sbjct: 388 RDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTL 447

Query: 434 ISSYVHNGLANEALELFYLMNEAN-VESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           IS Y  NGLA+EA+E++ +M E   ++ +  T VS L+A + +  L++G  ++G +I+  
Sbjct: 448 ISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTN 507

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
            +L+  V + L+D+Y +CG L  A  +F  V  +  + W ++I+ +G+HG G+ A+ LF 
Sbjct: 508 LHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFR 567

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           +M+ E   PDH+TF++LL ACSHSGL++EGK F  +M+ +Y + P  +HY C+VDLLGRA
Sbjct: 568 EMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ-EYGIKPSLKHYGCMVDLLGRA 626

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
             LE AY F++ M + P A +W ALLGACR+H N ELG+  + +L E+D  N G YVL+S
Sbjct: 627 GFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLS 686

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           N++A   KW+ V++VR   R  GLKKTPG S IE+  ++  F   ++SH +  EIY +L 
Sbjct: 687 NIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELR 746

Query: 733 EITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNL 792
            +T K+ +  GY+    FVL +VEE+EK  +L  HSERLAIA+G++ +   S IRI KNL
Sbjct: 747 ILTAKM-KSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNL 805

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           RVC DCH+  K +SR+  RE+VVRD+ RFHHF+ G+CSCGDYW
Sbjct: 806 RVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848



 Score =  286 bits (732), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 176/580 (30%), Positives = 308/580 (53%), Gaps = 14/580 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLET-YSRMRVLGISVDAF 59
           +Y   G V  +   FD++ ++ V+TWN+M+ AYV NG     ++  Y  + V     D +
Sbjct: 117 LYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFY 176

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP V+KAC  L D   G KIH  V K G+    F+  SL+ MY++      AR LFD M
Sbjct: 177 TFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDM 233

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + D+  WN++IS    +G   +AL +  EM+  G+  ++ T  + L  C      +  
Sbjct: 234 PFR-DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTA 292

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH   +K G   +++V+NALI MYA+ G + +A  V  Q+  +D VSWNS++  + QN
Sbjct: 293 TLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQN 352

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD-LQI 298
           D    A  FF ++Q  G +PD +  V+  S + +  +  N + +H + +++G++ + + I
Sbjct: 353 DDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVI 412

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV-QLEG 357
           GN +MDMYAK   ++   +VF  +  +D +SW T+I+GY QN    +A+E++R + +   
Sbjct: 413 GNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECRE 472

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           +  +     S+L A + +  + Q   IHG++I+  L  D+ +   ++D+YGKCG +  + 
Sbjct: 473 IKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAM 532

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F  +  +  V W ++IS +  +G   +AL+LF  M +  V+ D +T +S LSA S   
Sbjct: 533 CLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSG 592

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMI 535
           ++ +GK     +   G          +VD+  R G L++A + + +     D  +W +++
Sbjct: 593 LVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALL 652

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
            A  +HG    GK A D  +++++E+    +   L+ +YA
Sbjct: 653 GACRIHGNIELGKFASDRLFEVDSENVG--YYVLLSNIYA 690



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 273/509 (53%), Gaps = 21/509 (4%)

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           L   +HA  V SG+    +++  L+ +YA  G ++ + G   Q++ KD  +WNSM++ +V
Sbjct: 91  LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYV 150

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           +N  + +A+  F +L    +      T   V  + +   L++G+++H +  K GF  D+ 
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ--TLVDGRKIHCWVFKLGFQWDVF 208

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +  +L+ MY++   V     +F  M  +D  SW  +I+G  QN    +AL++   ++LEG
Sbjct: 209 VAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 268

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           ++ D + + S+L  C+ L  +S    IH Y+I+ GL  +L + NA++++Y K GN+  ++
Sbjct: 269 INMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQ 328

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF+ +  +DVVSW S+I++Y  N     A   F+ M    +E D +TLVS  S A+   
Sbjct: 329 KVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSR 388

Query: 477 ILKKGKELNGFIIRKGFNLEGSV-ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             K  + ++GFI+R+G+ +E  V  ++++DMYA+ G +D A+KVFN +  KD++ W ++I
Sbjct: 389 DYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLI 448

Query: 536 NANGLHGRGKVAIDLFYKMEA-ESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDY 593
           +    +G    AI+++  ME       +  T++++L A +H G + +G +    +++ + 
Sbjct: 449 SGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNL 508

Query: 594 QLDPWPEHYACLVDLLGRANHLEEA----YQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
            LD +     CL+DL G+   L +A    YQ  R   +      W A++    +H +   
Sbjct: 509 HLDVFVG--TCLIDLYGKCGRLVDAMCLFYQVPRESSVP-----WNAIISCHGIHGH--- 558

Query: 650 GEIVAKKLLEL-DPGNPGNYVLISNVFAA 677
           GE   K   E+ D G   ++V   ++ +A
Sbjct: 559 GEKALKLFREMQDEGVKPDHVTFISLLSA 587


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 295/835 (35%), Positives = 487/835 (58%), Gaps = 5/835 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KC     A ++FD++      +W++++ AY +NG P   ++ +  MR  G+  + F  
Sbjct: 47  YSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFAL 106

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+K    + D   GA++H + +  G+ S  F+ N+LVAMY        AR++FD  G 
Sbjct: 107 PVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGS 163

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + + V WN ++SAY  + QC +A+ +F EM   G+    + F   + AC  S     G +
Sbjct: 164 ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQ 223

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  V+ G    V+ ANAL+ MY + G++  A+ +  ++ + D VSWN++++G V N  
Sbjct: 224 VHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGH 283

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++   +++ +G  P+     + + A    G    G+++H + IK    SD  IG  
Sbjct: 284 DHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVG 343

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAK   ++   +VF  M+ +D I W  +I+G +    H +A  +F  ++ EGL  +
Sbjct: 344 LVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVN 403

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFE 420
              + +VL + + L+  S T+++H    + G + D  ++N ++D Y KC  +  +  VFE
Sbjct: 404 RTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFE 463

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
              S D+++ TSMI++         A++LF  M    +E D   L S L+A +SLS  ++
Sbjct: 464 ECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++  +I++ F  +    ++LV  YA+CG+++ A   F+ +  + ++ W++MI     
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 583

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG GK A++LF +M  E   P+HIT  ++L AC+H+GL++E K++   M+  + +D   E
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE 643

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY+C++DLLGRA  L++A + V SM  +  A VW ALLGA RVH + ELG++ A+KL  L
Sbjct: 644 HYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFIL 703

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           +P   G +VL++N +A+S  W +V +VR  M+ S +KK P  SW+E+ +K+H+FI  DKS
Sbjct: 704 EPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKS 763

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H  + EIY KL E+ + L  + GY+      LH+++  EK  +L  HSERLA+A+ +L +
Sbjct: 764 HPMTKEIYSKLDELGD-LMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLST 822

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             G+ IR+ KNLR+C DCH   K +S +  RE+++RD NRFHHF  G CSCGDYW
Sbjct: 823 PPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 178/612 (29%), Positives = 311/612 (50%), Gaps = 30/612 (4%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           GA +H  +LK G+ ++  + N L++ Y+KC     AR++FD + +   V  W+S+++AYS
Sbjct: 23  GAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEIPDPCHVS-WSSLVTAYS 79

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +G    A+  F  M+  G+  N +     L+   D+    LG ++HA  + +G    V+
Sbjct: 80  NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQ---LGAQVHAMAMATGFGSDVF 136

Query: 197 VANALIAMYARCGKMTEAAGVLYQL-ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           VANAL+AMY   G M +A  V  +    +++VSWN +++ +V+ND    A+Q F E+  +
Sbjct: 137 VANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196

Query: 256 GQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           G +P +    C VNA + S    N+  G+++HA  ++ G+  D+   N L+DMY K   V
Sbjct: 197 GIQPTEFGFSCVVNACTGS---RNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 253

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
           +    +F +M   D +SW  +I+G   N    +A+EL   ++  GL  +V ++ S+L AC
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 313

Query: 373 SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           +G       ++IHG++I+    SD  I   +VD+Y K   +D +  VF+ +  +D++ W 
Sbjct: 314 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWN 373

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           ++IS   H G  +EA  +FY + +  +  +  TL + L + +SL      ++++    + 
Sbjct: 374 ALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKI 433

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           GF  +  V + L+D Y +C  L  A +VF    + D+I  TSMI A      G+ AI LF
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLF 493

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLG 610
            +M  +   PD     +LL AC+      +GK+    +++  +  D +  +   LV    
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN--ALVYTYA 551

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL-----DPGNP 665
           +   +E+A +   S   E     W A++G    H +        K+ LEL     D G  
Sbjct: 552 KCGSIEDA-ELAFSSLPERGVVSWSAMIGGLAQHGH-------GKRALELFGRMVDEGIN 603

Query: 666 GNYVLISNVFAA 677
            N++ +++V  A
Sbjct: 604 PNHITMTSVLCA 615



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 224/443 (50%), Gaps = 5/443 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G V  A  +F+K+    V +WNA++   V NG   R +E   +M+  G+  + F 
Sbjct: 246 MYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFM 305

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++KACA     D G +IHG ++K   DS D+I   LV MYAK +    A ++FD M 
Sbjct: 306 LSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS 365

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D++LWN++IS  S  G+  EA  +F  +++ GL  N  T  A L++       +   
Sbjct: 366 HR-DLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATR 424

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA   K G     +V N LI  Y +C  +++A  V  +  + D ++  SM+T   Q D
Sbjct: 425 QVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCD 484

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++ F E+   G +PD     + ++A   L     GK++HA+ IK+ F+SD   GN
Sbjct: 485 HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 544

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+  YAKC  +      F  +  +  +SW+ +I G AQ+    +ALELF  +  EG++ 
Sbjct: 545 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINP 604

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV--ILNAIVDVYGKCGNIDYSRNV 418
           + + + SVL AC+    + + K     +      D      + ++D+ G+ G +D +  +
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL 664

Query: 419 FESIESKDVVS-WTSMI-SSYVH 439
             S+  +   S W +++ +S VH
Sbjct: 665 VNSMPFQANASVWGALLGASRVH 687



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 214/425 (50%), Gaps = 19/425 (4%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M+  G ++   T  AA QA         G  +HA  +KSG      + N LI+ Y++C +
Sbjct: 1   MRSAGTISQQLTRYAAAQAL------LPGAHLHANLLKSG--FLASLRNHLISFYSKCRR 52

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
              A  V  ++ +   VSW+S++T +  N L   A+Q F      G + + VC  N  + 
Sbjct: 53  PCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFH-----GMRAEGVCC-NEFAL 106

Query: 271 SGRLGNLLN---GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM-TAQD 326
              L  + +   G ++HA A+  GF SD+ + N L+ MY     ++   RVF +  + ++
Sbjct: 107 PVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERN 166

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SW  +++ Y +N+    A+++F  +   G+         V+ AC+G + +   +++H 
Sbjct: 167 AVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHA 226

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
            ++R G   D+   NA+VD+Y K G +D +  +FE +   DVVSW ++IS  V NG  + 
Sbjct: 227 MVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHR 286

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A+EL   M  + +  +   L S L A +       G++++GF+I+   + +  +   LVD
Sbjct: 287 AIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVD 346

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MYA+   LD A KVF+ +  +DLILW ++I+     GR   A  +FY +  E    +  T
Sbjct: 347 MYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTT 406

Query: 566 FLALL 570
             A+L
Sbjct: 407 LAAVL 411



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 42/350 (12%)

Query: 383 EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
            +H  +++ G     + N ++  Y KC     +R VF+ I     VSW+S++++Y +NGL
Sbjct: 25  HLHANLLKSGFL-ASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
              A++ F+ M    V  +   L   L       +   G +++   +  GF  +  VA++
Sbjct: 84  PRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL---GAQVHAMAMATGFGSDVFVANA 140

Query: 503 LVDMYARCGALDIANKVFNCVQT-KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           LV MY   G +D A +VF+   + ++ + W  +++A   + +   AI +F +M      P
Sbjct: 141 LVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 200

Query: 562 DHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
               F  ++ AC+ S  I+ G++    ++R  Y+ D +  +   LVD+  +   ++ A  
Sbjct: 201 TEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTAN--ALVDMYVKMGRVDIASV 258

Query: 621 FVRSMQIEPTAEV--WCALLGACRV--HSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
               M   P ++V  W AL+  C +  H ++ +     + LL++         L+ NVF 
Sbjct: 259 IFEKM---PDSDVVSWNALISGCVLNGHDHRAI-----ELLLQMKSSG-----LVPNVF- 304

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
                         M  S LK   G+   ++G +IH F+   K++++SD+
Sbjct: 305 --------------MLSSILKACAGAGAFDLGRQIHGFMI--KANADSDD 338


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 305/786 (38%), Positives = 469/786 (59%), Gaps = 13/786 (1%)

Query: 56   VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            +D   +  +++ CA  K L  G  +H ++   G      +   LV MY  C   R+ R++
Sbjct: 449  LDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRI 508

Query: 116  FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            FD +     V LWN ++S Y+  G   E++ LF++MQ++G+  N+YTF   L+      F
Sbjct: 509  FDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKC-----F 563

Query: 176  ETLGM-----EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
             TLG       IH    K G      V N+LIA Y + G++  A  +  +L ++D VSWN
Sbjct: 564  ATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWN 623

Query: 231  SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
            SM++G V N     A++FF ++       D    VN+V+A   +G+L  G+ LH   +K 
Sbjct: 624  SMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKA 683

Query: 291  GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
             F  ++   NTL+DMY+KC  +N   + F +M  +  +SWT++IA Y +   +  A+ LF
Sbjct: 684  CFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLF 743

Query: 351  RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
              ++ +G+  DV  + SVL AC+    + + +++H YI +  ++  L + NA++D+Y KC
Sbjct: 744  YEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKC 803

Query: 410  GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
            G+++ +  VF  I  KD+VSW +MI  Y  N L NEAL+LF  M + +   D IT+   L
Sbjct: 804  GSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLL 862

Query: 470  SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
             A  SL+ L+ G+ ++G I+R G++ E  VA++L+DMY +CG+L  A  +F+ +  KDLI
Sbjct: 863  PACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLI 922

Query: 530  LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
             WT MI+  G+HG G  AI  F KM      PD ITF ++LYACSHSGL+NEG  F   M
Sbjct: 923  TWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSM 982

Query: 590  RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
              +  ++P  EHYAC+VDLL R  +L +AY  + +M I+P A +W ALL  CR+H + EL
Sbjct: 983  ISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVEL 1042

Query: 650  GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
             E VA+ + EL+P N G YVL++N++A + KW++V+++R R+   GLKK+PG SWIE+  
Sbjct: 1043 AEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQG 1102

Query: 710  KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
            K  +F++ D +H ++  I+  L  +  K++ E G+  + ++ L N  + EK   L GHSE
Sbjct: 1103 KFTTFVSADTAHPQAKSIFSLLNNLRIKMKNE-GHSPKMRYALINAGDMEKEVALCGHSE 1161

Query: 770  RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
            +LA+A+G+L    G  IR+ KNLRVC DCH   K +S+   RE+++RD+NRFHHF+ G C
Sbjct: 1162 KLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFC 1221

Query: 830  SCGDYW 835
            SC D+W
Sbjct: 1222 SCRDFW 1227



 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 192/600 (32%), Positives = 321/600 (53%), Gaps = 25/600 (4%)

Query: 1    MYGKCGSVLDAEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
            MY  CG++ +  ++FD + S   VF WN M+  Y   G+    +  + +M+ LGI+ +++
Sbjct: 495  MYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSY 554

Query: 60   TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
            TF C++K  A L  +    +IHG V K G+ S + +VNSL+A Y K  +   A +LFD +
Sbjct: 555  TFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDEL 614

Query: 120  GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            G++ DVV WNS+IS    +G    AL  F +M  + +  +  T V ++ AC +    +LG
Sbjct: 615  GDR-DVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLG 673

Query: 180  MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
              +H   VK+  + +V   N L+ MY++CG + +A     ++  K  VSW S++  +V+ 
Sbjct: 674  RALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVRE 733

Query: 240  DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             LY  A++ F E++  G  PD     + + A     +L  G+++H Y  K      L + 
Sbjct: 734  GLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVS 793

Query: 300  NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            N LMDMYAKC  +     VF Q+  +D +SW T+I GY++N+   +AL+LF  +Q E   
Sbjct: 794  NALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-R 852

Query: 360  ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
             D + +  +L AC  L  +   + IHG I+R G  S+L + NA++D+Y KCG++ ++R +
Sbjct: 853  PDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLL 912

Query: 419  FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
            F+ I  KD+++WT MIS    +GL NEA+  F  M  A ++ D IT  S L A S   +L
Sbjct: 913  FDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLL 972

Query: 479  KKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQT----KDLILWT 532
             +G      +I +  N+E  +   + +VD+ AR G L   +K +N ++T     D  +W 
Sbjct: 973  NEGWGFFNSMISE-CNMEPKLEHYACMVDLLARTGNL---SKAYNLIETMPIKPDATIWG 1028

Query: 533  SMINANGLHGRGKVAIDLFYKMEAESF--APDHITFLALLYACSHSGLINEGKKFLEIMR 590
            +++    +H      ++L  K+    F   PD+  +  LL     + +  E +K+ E+ +
Sbjct: 1029 ALLCGCRIHHD----VELAEKVAEHVFELEPDNAGYYVLL-----ANIYAEAEKWEEVKK 1079



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 146/298 (48%), Gaps = 8/298 (2%)

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVD 404
           A+EL R  Q   LD +     S+L  C+  KC+ + K +H  I   G+    +L A +V 
Sbjct: 437 AVELLRMSQKSELDLNAY--SSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVF 494

Query: 405 VYGKCGNIDYSRNVFESIESKD-VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           +Y  CG +   R +F+ I S + V  W  M+S Y   G   E++ LF  M +  +  +S 
Sbjct: 495 MYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSY 554

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T    L   ++L  + + K ++G + + GF    +V +SL+  Y + G +D A+K+F+ +
Sbjct: 555 TFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDEL 614

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
             +D++ W SMI+   ++G    A++ F +M       D  T +  + AC++ G ++ G+
Sbjct: 615 GDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGR 674

Query: 584 KFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
               + ++  +  +    +   L+D+  +  +L +A Q    M  + T   W +L+ A
Sbjct: 675 ALHGQGVKACFSREVMFNNT--LLDMYSKCGNLNDAIQAFEKMG-QKTVVSWTSLIAA 729



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 6/163 (3%)

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I  +   G    A+EL  +  ++ ++ ++ +  S L   +    L++GK ++  I   G 
Sbjct: 425 ICKFCEVGDLRNAVELLRMSQKSELDLNAYS--SILQLCAEHKCLQEGKMVHSVISSNGI 482

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMINANGLHGRGKVAIDLFY 552
            +EG + + LV MY  CGAL    ++F+ + + + + LW  M++     G  + +I LF 
Sbjct: 483 PIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFK 542

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           KM+      +  TF  +L   +  G + E K+   I  C Y+L
Sbjct: 543 KMQKLGITGNSYTFSCILKCFATLGRVGECKR---IHGCVYKL 582


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 306/836 (36%), Positives = 482/836 (57%), Gaps = 3/836 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y + G V  A ++FD +  +   +W AM+     N   +  +  +  M VLGI    + 
Sbjct: 214  LYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYA 273

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            F  V+ AC  ++ L+ G ++HGLVLK G+ S  ++ N+LV++Y        A  +F  M 
Sbjct: 274  FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMS 333

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            ++ D V +N++I+  S  G   +A+ LF+ MQ  GL  ++ T  + + AC        G 
Sbjct: 334  QR-DAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQ 392

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            ++HA T K G      +  AL+ +YA+C  +  A     + E ++ V WN ML  +   D
Sbjct: 393  QLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLD 452

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                + + FR++Q     P+Q    + +    RLG+L  G+++H+  IK  F  +  + +
Sbjct: 453  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCS 512

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+DMYAK   ++    +  +   +D +SWTT+IAGY Q N   KAL  FR +   G+ +
Sbjct: 513  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 572

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
            D + + + + AC+GL+ + + ++IH      G S DL   NA+V +Y KCGNI+ +   F
Sbjct: 573  DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAF 632

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            E  E+ D ++W +++S +  +G   EAL +F  MN   ++S++ T  SA+ AAS  + +K
Sbjct: 633  EQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMK 692

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            +GK+++  I + G++ E  V ++++ MYA+CG++  A K F  +  K+ + W +MINA  
Sbjct: 693  QGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYS 752

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             HG G  A+D F +M   +  P+H+T + +L ACSH GL+++G ++ E M  +Y L P P
Sbjct: 753  KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKP 812

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            EHY C+VD+L RA  L  A  F+  M IEP A VW  LL AC VH N E+GE  A  LLE
Sbjct: 813  EHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 872

Query: 660  LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            L+P +   YVL+SN++A  RKW   +  R +M+  G+KK PG SWIE+ N IHSF   D+
Sbjct: 873  LEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 932

Query: 720  SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            +H  +DEI++   ++T++   E GYV     +L  +++E+K   ++ HSE+LAI++G+L 
Sbjct: 933  NHPLADEIHEYFKDLTKR-ASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLS 991

Query: 780  STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                  I + KNLRVC DCH + K VS++  RE++VRDA RFHHFE G CSC DYW
Sbjct: 992  LPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 159/581 (27%), Positives = 299/581 (51%), Gaps = 3/581 (0%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A ++FD++ +RT+FTWN M+    S     +V   + RM    ++ +  TF  V+
Sbjct: 117 GDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVL 176

Query: 66  KAC-AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           +AC       D   +IH  ++  G   +  + N L+ +Y++     +AR++FD +  K D
Sbjct: 177 EACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLK-D 235

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
              W ++IS  S +   +EA+ LF +M  +G++   Y F + L AC+      +G ++H 
Sbjct: 236 HSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 295

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             +K G +   YV NAL+++Y   G +  A  +   +  +D+V++N+++ G  Q     K
Sbjct: 296 LVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 355

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           AM+ F+ +Q  G +PD     + V A    G L +G++LHAY  K GF S+ +I   L++
Sbjct: 356 AMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLN 415

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +YAKC  +      F +   ++ + W  ++  Y   +    +  +FR +Q+E +  +   
Sbjct: 416 LYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 475

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
             S+L  C  L  +   ++IH  II+     +  + + ++D+Y K G +D + ++     
Sbjct: 476 YPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 535

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            KDVVSWT+MI+ Y      ++AL  F  M +  + SD + L +A+SA + L  LK+G++
Sbjct: 536 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 595

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++      GF+ +    ++LV +Y++CG ++ A   F   +  D I W ++++     G 
Sbjct: 596 IHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGN 655

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            + A+ +F +M  E    ++ TF + + A S +  + +GK+
Sbjct: 656 NEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQ 696



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 189/691 (27%), Positives = 326/691 (47%), Gaps = 26/691 (3%)

Query: 53  GISVDAFTFPCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
           GI  +  T   +++ C      LD G K+H  +LK G+D+   +   L+  Y    D   
Sbjct: 62  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A ++FD M E+  +  WN +I   ++     +   LF  M    +  N  TF   L+AC 
Sbjct: 122 ALKVFDEMPERT-IFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACR 180

Query: 172 DSS--FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
             S  F+ +  +IHA  +  G      V N LI +Y+R G +  A  V   L  KD  SW
Sbjct: 181 GGSVAFDVVE-QIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSW 239

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
            +M++G  +N+   +A++ F ++   G  P      + +SA  ++ +L  G++LH   +K
Sbjct: 240 VAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 299

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
            GF SD  + N L+ +Y     +     +F  M+ +D +++ T+I G +Q     KA+EL
Sbjct: 300 LGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 359

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
           F+ +QL+GL+ D   + S+++ACS    +   +++H Y  + G  S+  I  A++++Y K
Sbjct: 360 FKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAK 419

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE---SDSITL 465
           C +I+ + N F   E ++VV W  M+ +Y   GL ++    F +  +  +E    +  T 
Sbjct: 420 CSDIETALNYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTY 476

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S L     L  L+ G++++  II+  F L   V S L+DMYA+ G LD A  +      
Sbjct: 477 PSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 536

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           KD++ WT+MI     +     A+  F +M       D +     + AC+    + EG++ 
Sbjct: 537 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ- 595

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV-WCALL-GACRV 643
           +    C             LV L  +  ++EEAY  +   Q E    + W AL+ G  + 
Sbjct: 596 IHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAY--LAFEQTEAGDNIAWNALVSGFQQS 653

Query: 644 HSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASR--KWKDVEQVRMRMRGSGLKKTPG 701
            +N+E   + A+  +  +  +  N+   S V AAS     K  +QV      + + KT  
Sbjct: 654 GNNEEALRVFAR--MNREGIDSNNFTFGSAVKAASETANMKQGKQVH-----AVITKTGY 706

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
            S  E+ N I S  A+  S S++ + + +L+
Sbjct: 707 DSETEVCNAIISMYAKCGSISDAKKQFLELS 737


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 304/789 (38%), Positives = 488/789 (61%), Gaps = 18/789 (2%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D  T   V++ CA  K L  G ++   +   G+     + + L  MY  C D ++A ++
Sbjct: 92  IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRV 151

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD++ + E  + WN +++  + SG    ++GLF++M   G+  ++YTF     +C   SF
Sbjct: 152 FDQV-KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF-----SCVSKSF 205

Query: 176 ETL-----GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
            +L     G ++H   +KSG   +  V N+L+A Y +  ++  A  V  ++  +D +SWN
Sbjct: 206 SSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWN 265

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPD--QVCTVNAVSASGRLGNLLNGKELHAYAI 288
           S++ G+V N L  K +  F ++  +G + D   + +V A  A  RL +L  G+ +H + +
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISL--GRAVHCFGV 323

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K  F  + +  NTL+DMY+KC  ++    VF +M+ +  +S+T++IAGYA+     +A++
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVK 383

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYG 407
           LF  ++ EG+  DV  + +VL  C+  + + + K +H +I    +  D+ + NA++D+Y 
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYA 443

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLV 466
           KCG++  +  VF  +  KD++SW ++I  Y  N  ANEAL LF  L+ E     D  T+ 
Sbjct: 444 KCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVA 503

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
             L A +SLS   KG+E++G+I+R G+  +  VA+SLVDMYA+CGAL +A  +F+ + +K
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSK 563

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           DL+ WT MI   G+HG GK AI LF +M      PD I+F++LLYACSHSGL++EG +F 
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFF 623

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
            IMR + +++P  EHYAC+VD+L R  +L +AY+F+ +M I P A +W ALL  CR+H +
Sbjct: 624 NIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHD 683

Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            +L E VA+K+ EL+P N G YVL++N++A + KW++V+++R R+   GL+K PG SWIE
Sbjct: 684 VKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIE 743

Query: 707 IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
           I  +++ F+A D S+ E+++I   L  +  ++  E GY   T++ L + EE EK + L G
Sbjct: 744 IKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEE-GYSPLTKYALIDAEEMEKEEALCG 802

Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
           HSE+LA+A G++ S  G +IR+TKNLRVC DCH   K +S+L  RE+V+RD+NRFH F+ 
Sbjct: 803 HSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKD 862

Query: 827 GVCSCGDYW 835
           G CSC  +W
Sbjct: 863 GHCSCRGFW 871



 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 201/599 (33%), Positives = 321/599 (53%), Gaps = 22/599 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG + +A ++FD+V       WN ++     +G+    +  + +M   G+ +D++T
Sbjct: 138 MYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F CV K+ + L+ ++ G ++HG +LK G+   + + NSLVA Y K +    AR++FD M 
Sbjct: 198 FSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMT 257

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DV+ WNSII+ Y ++G   + L +F +M   G+  +  T V+    C DS   +LG 
Sbjct: 258 ER-DVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGR 316

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   VK+  + +    N L+ MY++CG +  A  V  ++  +  VS+ SM+ G+ +  
Sbjct: 317 AVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREG 376

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAV---SASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           L  +A++ F E++  G  PD V TV AV    A  RL  L  GK +H +  +     D+ 
Sbjct: 377 LAGEAVKLFEEMEEEGISPD-VYTVTAVLNCCARNRL--LDEGKRVHEWIKENDMGFDIF 433

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N LMDMYAKC  +     VF +M  +D ISW T+I GY++N    +AL LF  + +E 
Sbjct: 434 VSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEK 493

Query: 358 -LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYS 415
               D   +  VL AC+ L    + +EIHGYI+R G  SD  + N++VD+Y KCG +  +
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           R +F+ I SKD+VSWT MI+ Y  +G   EA+ LF  M +A +E D I+ VS L A S  
Sbjct: 554 RLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHS 613

Query: 476 SILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANK-VFNCVQTKDLILWT 532
            ++ +G      I+R    +E +V   + +VDM AR G L  A + + N     D  +W 
Sbjct: 614 GLVDEGWRFFN-IMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWG 672

Query: 533 SMINANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           +++    +H   K+A  +  K+ E E     +   +A +YA        E +K+ E+ R
Sbjct: 673 ALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYA--------EAEKWEEVKR 723



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 1/226 (0%)

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
           D D   + SVL  C+  K +   KE+  +I   G   D  + + +  +Y  CG++  +  
Sbjct: 91  DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASR 150

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ ++ +  + W  +++    +G  + ++ LF  M  + VE DS T      + SSL  
Sbjct: 151 VFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           +  G++L+G+I++ GF    SV +SLV  Y +   +D A KVF+ +  +D+I W S+IN 
Sbjct: 211 VNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIING 270

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
              +G  +  + +F +M       D  T +++   C+ S LI+ G+
Sbjct: 271 YVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGR 316


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 294/798 (36%), Positives = 478/798 (59%), Gaps = 6/798 (0%)

Query: 39  PLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS 98
           P  VL+   R    G  VD++ +  ++++C   KDL  G ++H  +L+CG     +I N+
Sbjct: 12  PADVLQYLHRK---GPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNT 68

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
           L+ +YA C    +ARQLFD+   K  VV WN +IS Y+  G   EA  LF  MQ+  L  
Sbjct: 69  LLKLYAHCGSVNEARQLFDKFSNK-SVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEP 127

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           + +TFV+ L AC   +    G EIH   +++G      V NALI+MYA+CG + +A  V 
Sbjct: 128 DKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVF 187

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
             + ++D VSW ++   + ++    ++++ +  +     +P ++  +N +SA G L  L 
Sbjct: 188 DAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALE 247

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
            GK++HA+ ++  + SD+++   L  MY KC        VF  ++ +D I+W T+I G+ 
Sbjct: 248 KGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFV 307

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLV 397
            +    +A   F  +  EG+  D     +VL AC+    +++ KEIH    + GL SD+ 
Sbjct: 308 DSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVR 367

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
             NA++++Y K G++  +R VF+ +  +DVVSWT+++  Y       E+   F  M +  
Sbjct: 368 FGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQG 427

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           V+++ IT +  L A S+   LK GKE++  +++ G   + +V ++L+ MY +CG+++ A 
Sbjct: 428 VKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAI 487

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           +VF  +  +D++ W ++I   G +GRG  A+  +  M++E   P+  TF+ +L AC    
Sbjct: 488 RVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCN 547

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L+ EG++    M  DY + P  +HYAC+VD+L RA HL EA   + ++ ++P+A +W AL
Sbjct: 548 LVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGAL 607

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           L ACR+H N E+GE  A+  L+L+P N G YV +S ++AA+  W+DV ++R  M+  G+K
Sbjct: 608 LAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVK 667

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K PG SWIEI  ++HSF+ARD+SH  + EIY +L E  +K  +  GYV  T+FV+H++++
Sbjct: 668 KEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAEL-ETLKKQMKSLGYVPDTRFVMHDLDD 726

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           E K + +  HSE+LAIAYG++ +  G+ IRI+KNLRVC DCH+  K +S++  RE++ RD
Sbjct: 727 EGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARD 786

Query: 818 ANRFHHFEAGVCSCGDYW 835
           A+RFHHF+ G CSCGDYW
Sbjct: 787 AHRFHHFKNGECSCGDYW 804



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 174/544 (31%), Positives = 293/544 (53%), Gaps = 4/544 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CGSV +A QLFDK S ++V +WN M+  Y   G        ++ M+   +  D FT
Sbjct: 72  LYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFT 131

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ AC+    L+ G +IH  V++ G  +   + N+L++MYAKC   R AR++FD M 
Sbjct: 132 FVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMA 191

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +++V  W ++  AY+ SG   E+L  +  M +  +  +  T++  L AC   +    G 
Sbjct: 192 SRDEVS-WTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGK 250

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  V+S  +  V V+ AL  MY +CG   +A  V   L  +D ++WN+M+ GFV + 
Sbjct: 251 QIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSG 310

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F  +   G  PD+      +SA  R G L  GKE+HA A K G VSD++ GN
Sbjct: 311 QLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGN 370

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++MY+K   +    +VF +M  +D +SWTT++  YA  +  +++   F+ +  +G+ A
Sbjct: 371 ALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKA 430

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           + +    VL ACS    +   KEIH  +++ G L+DL + NA++ +Y KCG+++ +  VF
Sbjct: 431 NKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVF 490

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  +DVV+W ++I     NG   EAL+ + +M    +  ++ T V+ LSA    ++++
Sbjct: 491 EGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVE 550

Query: 480 KGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           +G+    F+ +  G        + +VD+ AR G L  A  V   +  K    +W +++ A
Sbjct: 551 EGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAA 610

Query: 538 NGLH 541
             +H
Sbjct: 611 CRIH 614


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 301/839 (35%), Positives = 492/839 (58%), Gaps = 9/839 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G V  A ++F+++S R   +W AML  Y  NG     +  Y +M   G+    + 
Sbjct: 86  LYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYV 145

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC      + G  +H  V K G  S   + N+L+A+Y +      A ++F  M 
Sbjct: 146 LSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEM- 204

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V +N++IS ++  G    AL +F EM+  G   +  T  + L AC        G 
Sbjct: 205 PYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGK 264

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  +K+G +    +  +L+ +Y +CG + EA  +    +  + V WN ML  + Q  
Sbjct: 265 QLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQIS 324

Query: 241 LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
              K+   F ++  AG +P++    C +   + +G + NL  G+++H  +IK GF SD+ 
Sbjct: 325 DLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEI-NL--GEQIHLLSIKTGFESDMY 381

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +   L+DMY+K   ++   R+   + A+D +SWT++IAGY Q+    +ALE F+ +QL G
Sbjct: 382 VSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFG 441

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           +  D + + S + AC+G+K M Q ++IH  +   G S D+ I NA+V++Y +CG    + 
Sbjct: 442 IWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAF 501

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           ++FE+IE KD ++W  M+S +  +GL  EALE+F  M +A V+ +  T VS++SA+++L+
Sbjct: 502 SLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLA 561

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            +K+GK+++  +I+ G   E  VA++L+ +Y +CG+++ A   F  +  ++ + W ++I 
Sbjct: 562 DIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIIT 621

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           +   HG G  A+DLF +M+ E   P+ +TF+ +L ACSH GL+ EG  + + M  ++ + 
Sbjct: 622 SCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIH 681

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P P+HYAC+VD+LGRA  L+ A +FV  M +   A VW  LL ACRVH N E+GE+ AK 
Sbjct: 682 PRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKY 741

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           LLEL+P +  +YVL+SN +A + KW   + VR  M+  G++K PG SWIE+ N +H+F  
Sbjct: 742 LLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFV 801

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D+ H  + +IYK LA++ ++L +  GY+    F+ H  E+E+K    + HSE+LA+A+G
Sbjct: 802 GDRLHPLAHQIYKYLADLDDRLAKI-GYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFG 860

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++       +R+ KNLRVC DCH++ K  S + GRE+V+RD  RFHHF  G CSCGD+W
Sbjct: 861 LMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 175/633 (27%), Positives = 323/633 (51%), Gaps = 13/633 (2%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYS----RMRVLGISVDAFTFPCVIKAC-AMLK 72
           +++R   + N  L  ++++ +P ++L  ++    + R LG SVD   F C ++ C   +K
Sbjct: 1   MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLG-SVD---FACALRECRGSVK 56

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
                  IH   + CG        N L+ +YAK    ++AR++F+++  +++V  W +++
Sbjct: 57  HWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVS-WVAML 115

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           S Y+ +G   EA+GL+ +M   G+V   Y   + L AC  ++    G  +HA   K G  
Sbjct: 116 SGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSC 175

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
            +  V NALIA+Y R G ++ A  V  ++   D V++N++++   Q      A++ F E+
Sbjct: 176 SETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEM 235

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           + +G  PD V   + ++A   +G+L  GK+LH+Y +K G   D  I  +L+D+Y KC  +
Sbjct: 236 RLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVI 295

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
                +F      + + W  ++  Y Q +   K+ +LF  +   G+  +      +L  C
Sbjct: 296 VEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTC 355

Query: 373 SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           +    ++  ++IH   I+ G  SD+ +   ++D+Y K G +D +R + E +E+KDVVSWT
Sbjct: 356 TYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWT 415

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           SMI+ YV +    EALE F  M    +  D+I L SA+SA + +  +++G++++  +   
Sbjct: 416 SMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVS 475

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           G++ + S+ ++LV++YARCG    A  +F  ++ KD I W  M++     G  + A+++F
Sbjct: 476 GYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVF 535

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
            KM       +  TF++ + A ++   I +GK+ +             E    L+ L G+
Sbjct: 536 IKMYQAGVKYNVFTFVSSISASANLADIKQGKQ-IHATVIKTGCTSETEVANALISLYGK 594

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
              +E+A      M  E     W  ++ +C  H
Sbjct: 595 CGSIEDAKMQFFEMS-ERNHVSWNTIITSCSQH 626


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 304/836 (36%), Positives = 485/836 (58%), Gaps = 3/836 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y + G V  A ++FD +  +   +W AM+     N      +  +  M VLGI    + 
Sbjct: 231  LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            F  V+ AC  ++ L+ G ++HGLVLK G+ S  ++ N+LV++Y    +   A  +F  M 
Sbjct: 291  FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            ++ D V +N++I+  S  G   +A+ LF+ M   GL  ++ T  + + AC        G 
Sbjct: 351  QR-DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            ++HA T K G      +  AL+ +YA+C  +  A     + E ++ V WN ML  +   D
Sbjct: 410  QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                + + FR++Q     P+Q    + +    RLG+L  G+++H+  IK  F  +  + +
Sbjct: 470  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+DMYAK   ++    +  +   +D +SWTT+IAGY Q N   KAL  FR +   G+ +
Sbjct: 530  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
            D + + + + AC+GL+ + + ++IH      G S DL   NA+V +Y +CG I+ S   F
Sbjct: 590  DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            E  E+ D ++W +++S +  +G   EAL +F  MN   +++++ T  SA+ AAS  + +K
Sbjct: 650  EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            +GK+++  I + G++ E  V ++L+ MYA+CG++  A K F  V TK+ + W ++INA  
Sbjct: 710  QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 769

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             HG G  A+D F +M   +  P+H+T + +L ACSH GL+++G  + E M  +Y L P P
Sbjct: 770  KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            EHY C+VD+L RA  L  A +F++ M I+P A VW  LL AC VH N E+GE  A  LLE
Sbjct: 830  EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889

Query: 660  LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            L+P +   YVL+SN++A S+KW   +  R +M+  G+KK PG SWIE+ N IHSF   D+
Sbjct: 890  LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 949

Query: 720  SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            +H  +DEI++   ++T++   E GYV     +L+ ++ E+K  +++ HSE+LAI++G+L 
Sbjct: 950  NHPLADEIHEYFQDLTKR-ASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1008

Query: 780  STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                  I + KNLRVC DCH++ K VS++  RE++VRDA RFHHFE G CSC DYW
Sbjct: 1009 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 170/643 (26%), Positives = 320/643 (49%), Gaps = 9/643 (1%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A ++FD++ +RT+FTWN M+    S      V   + RM    ++ +  TF  V+
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193

Query: 66  KAC-AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           +AC       D   +IH  +L  G   +  + N L+ +Y++      AR++FD +  K D
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-D 252

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
              W ++IS  S +    EA+ LF +M  +G++   Y F + L AC+      +G ++H 
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             +K G +   YV NAL+++Y   G +  A  +   +  +D+V++N+++ G  Q     K
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           AM+ F+ +   G +PD     + V A    G L  G++LHAY  K GF S+ +I   L++
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 432

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +YAKC  +      F +   ++ + W  ++  Y   +    +  +FR +Q+E +  +   
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
             S+L  C  L  +   ++IH  II+     +  + + ++D+Y K G +D + ++     
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            KDVVSWT+MI+ Y      ++AL  F  M +  + SD + L +A+SA + L  LK+G++
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++      GF+ +    ++LV +Y+RCG ++ +   F   +  D I W ++++     G 
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM-RCDYQLDPWPEHY 602
            + A+ +F +M  E    ++ TF + + A S +  + +GK+   ++ +  Y  D   E  
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY--DSETEVC 730

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEV-WCALLGACRVH 644
             L+ +  +   + +A +  + +++    EV W A++ A   H
Sbjct: 731 NALISMYAKCGSISDAEK--QFLEVSTKNEVSWNAIINAYSKH 771



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 203/744 (27%), Positives = 338/744 (45%), Gaps = 42/744 (5%)

Query: 17  KVSQRTVFTW--------NAMLGAYVSNGEPL---RVLETYSRMRVLGISVDAFTFPCVI 65
           K+  RTVF           A +  Y+S  E     R+    +R    GI  +  T   ++
Sbjct: 36  KLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVENR----GIRPNHQTLKWLL 91

Query: 66  KACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           + C      LD G K+H  +LK G DS   +   L   Y    D   A ++FD M E+  
Sbjct: 92  EGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT- 150

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS--FETLGMEI 182
           +  WN +I   ++     E  GLF  M    +  N  TF   L+AC   S  F+ +  +I
Sbjct: 151 IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE-QI 209

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA  +  G      V N LI +Y+R G +  A  V   L  KD  SW +M++G  +N+  
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A++ F ++   G  P      + +SA  ++ +L  G++LH   +K GF SD  + N L
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           + +Y     +     +F  M+ +D +++ T+I G +Q     KA+ELF+ + L+GL+ D 
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFES 421
             + S+++ACS    + + +++H Y  + G  S+  I  A++++Y KC +I+ + + F  
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE---SDSITLVSALSAASSLSIL 478
            E ++VV W  M+ +Y   GL ++    F +  +  +E    +  T  S L     L  L
Sbjct: 450 TEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + G++++  II+  F L   V S L+DMYA+ G LD A  +      KD++ WT+MI   
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             +     A+  F +M       D +     + AC+    + EG++ +    C       
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSD 625

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV-WCALLGACRVHSNKELGEIVAKKL 657
                 LV L  R   +EE+Y  +   Q E    + W AL+   +   N E    V  ++
Sbjct: 626 LPFQNALVTLYSRCGKIEESY--LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683

Query: 658 LELDPGNPGNYVLISNVFAASR--KWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
                 N  N+   S V AAS     K  +QV      + + KT   S  E+ N + S  
Sbjct: 684 NREGIDN-NNFTFGSAVKAASETANMKQGKQVH-----AVITKTGYDSETEVCNALISMY 737

Query: 716 ARDKSHSESDEIYKKLAEITEKLE 739
           A+  S S+++   K+  E++ K E
Sbjct: 738 AKCGSISDAE---KQFLEVSTKNE 758


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 304/836 (36%), Positives = 485/836 (58%), Gaps = 3/836 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y + G V  A ++FD +  +   +W AM+     N      +  +  M VLGI    + 
Sbjct: 191  LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 250

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            F  V+ AC  ++ L+ G ++HGLVLK G+ S  ++ N+LV++Y    +   A  +F  M 
Sbjct: 251  FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 310

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            ++ D V +N++I+  S  G   +A+ LF+ M   GL  ++ T  + + AC        G 
Sbjct: 311  QR-DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 369

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            ++HA T K G      +  AL+ +YA+C  +  A     + E ++ V WN ML  +   D
Sbjct: 370  QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 429

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                + + FR++Q     P+Q    + +    RLG+L  G+++H+  IK  F  +  + +
Sbjct: 430  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 489

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+DMYAK   ++    +  +   +D +SWTT+IAGY Q N   KAL  FR +   G+ +
Sbjct: 490  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 549

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
            D + + + + AC+GL+ + + ++IH      G S DL   NA+V +Y +CG I+ S   F
Sbjct: 550  DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 609

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            E  E+ D ++W +++S +  +G   EAL +F  MN   +++++ T  SA+ AAS  + +K
Sbjct: 610  EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 669

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            +GK+++  I + G++ E  V ++L+ MYA+CG++  A K F  V TK+ + W ++INA  
Sbjct: 670  QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 729

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             HG G  A+D F +M   +  P+H+T + +L ACSH GL+++G  + E M  +Y L P P
Sbjct: 730  KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 789

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            EHY C+VD+L RA  L  A +F++ M I+P A VW  LL AC VH N E+GE  A  LLE
Sbjct: 790  EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 849

Query: 660  LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            L+P +   YVL+SN++A S+KW   +  R +M+  G+KK PG SWIE+ N IHSF   D+
Sbjct: 850  LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 909

Query: 720  SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            +H  +DEI++   ++T++   E GYV     +L+ ++ E+K  +++ HSE+LAI++G+L 
Sbjct: 910  NHPLADEIHEYFQDLTKR-ASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 968

Query: 780  STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                  I + KNLRVC DCH++ K VS++  RE++VRDA RFHHFE G CSC DYW
Sbjct: 969  LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 170/643 (26%), Positives = 320/643 (49%), Gaps = 9/643 (1%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A ++FD++ +RT+FTWN M+    S      V   + RM    ++ +  TF  V+
Sbjct: 94  GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 153

Query: 66  KAC-AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           +AC       D   +IH  +L  G   +  + N L+ +Y++      AR++FD +  K D
Sbjct: 154 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-D 212

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
              W ++IS  S +    EA+ LF +M  +G++   Y F + L AC+      +G ++H 
Sbjct: 213 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 272

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             +K G +   YV NAL+++Y   G +  A  +   +  +D+V++N+++ G  Q     K
Sbjct: 273 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 332

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           AM+ F+ +   G +PD     + V A    G L  G++LHAY  K GF S+ +I   L++
Sbjct: 333 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 392

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +YAKC  +      F +   ++ + W  ++  Y   +    +  +FR +Q+E +  +   
Sbjct: 393 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 452

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
             S+L  C  L  +   ++IH  II+     +  + + ++D+Y K G +D + ++     
Sbjct: 453 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 512

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            KDVVSWT+MI+ Y      ++AL  F  M +  + SD + L +A+SA + L  LK+G++
Sbjct: 513 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 572

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++      GF+ +    ++LV +Y+RCG ++ +   F   +  D I W ++++     G 
Sbjct: 573 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 632

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM-RCDYQLDPWPEHY 602
            + A+ +F +M  E    ++ TF + + A S +  + +GK+   ++ +  Y  D   E  
Sbjct: 633 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY--DSETEVC 690

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEV-WCALLGACRVH 644
             L+ +  +   + +A +  + +++    EV W A++ A   H
Sbjct: 691 NALISMYAKCGSISDAEK--QFLEVSTKNEVSWNAIINAYSKH 731



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 198/725 (27%), Positives = 332/725 (45%), Gaps = 34/725 (4%)

Query: 28  AMLGAYVSNGEPL---RVLETYSRMRVLGISVDAFTFPCVIKACAMLK-DLDCGAKIHGL 83
           A +  Y+S  E     R+    +R    GI  +  T   +++ C      LD G K+H  
Sbjct: 15  AAISVYISEDESFQEKRIDSVENR----GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQ 70

Query: 84  VLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE 143
           +LK G DS   +   L   Y    D   A ++FD M E+  +  WN +I   ++     E
Sbjct: 71  ILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT-IFTWNKMIKELASRNLIGE 129

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSS--FETLGMEIHAATVKSGQNLQVYVANAL 201
             GLF  M    +  N  TF   L+AC   S  F+ +  +IHA  +  G      V N L
Sbjct: 130 VFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE-QIHARILYQGLRDSTVVCNPL 188

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           I +Y+R G +  A  V   L  KD  SW +M++G  +N+   +A++ F ++   G  P  
Sbjct: 189 IDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 248

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
               + +SA  ++ +L  G++LH   +K GF SD  + N L+ +Y     +     +F  
Sbjct: 249 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 308

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
           M+ +D +++ T+I G +Q     KA+ELF+ + L+GL+ D   + S+++ACS    + + 
Sbjct: 309 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 368

Query: 382 KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
           +++H Y  + G  S+  I  A++++Y KC +I+ + + F   E ++VV W  M+ +Y   
Sbjct: 369 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY--- 425

Query: 441 GLANEALELFYLMNEANVE---SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           GL ++    F +  +  +E    +  T  S L     L  L+ G++++  II+  F L  
Sbjct: 426 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 485

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            V S L+DMYA+ G LD A  +      KD++ WT+MI     +     A+  F +M   
Sbjct: 486 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 545

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
               D +     + AC+    + EG++ +    C             LV L  R   +EE
Sbjct: 546 GIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 604

Query: 618 AYQFVRSMQIEPTAEV-WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           +Y  +   Q E    + W AL+   +   N E    V  ++      N  N+   S V A
Sbjct: 605 SY--LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN-NNFTFGSAVKA 661

Query: 677 ASR--KWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
           AS     K  +QV      + + KT   S  E+ N + S  A+  S S+++   K+  E+
Sbjct: 662 ASETANMKQGKQVH-----AVITKTGYDSETEVCNALISMYAKCGSISDAE---KQFLEV 713

Query: 735 TEKLE 739
           + K E
Sbjct: 714 STKNE 718


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 285/715 (39%), Positives = 446/715 (62%), Gaps = 2/715 (0%)

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D +  +  +S     G+  EALG+   M   G    +  F   LQ C        G E
Sbjct: 58  KVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGRE 117

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HAA +KSG     Y+ N L++MYA+CG +T+A  V   + +++ VSW +M+  FV  + 
Sbjct: 118 VHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQ 177

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A + +  ++ AG KPD+V  V+ ++A      L  G+++H    K G   + ++G +
Sbjct: 178 NLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTS 237

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ MYAKC  ++    +F ++  ++ ++WT +IAGYAQ      ALEL   +Q   +  +
Sbjct: 238 LVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPN 297

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
            +   S+L  C+    +   K++H YII+ G   ++ ++NA++ +Y KCG +  +R +F 
Sbjct: 298 KITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFG 357

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  +DVV+WT+M++ Y   G  +EA++LF  M +  ++ D +T  SAL++ SS + L++
Sbjct: 358 DLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQE 417

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK ++  ++  G++L+  + S+LV MYA+CG++D A  VFN +  ++++ WT+MI     
Sbjct: 418 GKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQ 477

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HGR + A++ F +M+ +   PD +TF ++L AC+H GL+ EG+K    M  DY + P  E
Sbjct: 478 HGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVE 537

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY+C VDLLGRA HLEEA   + +M  +P   VW ALL ACR+HS+ E GE  A+ +L+L
Sbjct: 538 HYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKL 597

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP + G YV +SN++AA+ +++D E+VR  M    + K PG SWIE+  K+H F   DKS
Sbjct: 598 DPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKS 657

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H E+ EIY +L ++TE++ +E GYV  T+FVLH+V+EE+KVQ L  HSERLAI YG++K+
Sbjct: 658 HPEAKEIYAELGKLTEQI-KEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKT 716

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             G+ IRI KNLRVC DCH+  K +S++ GRE++ RDA+RFHHF  GVCSCGD+W
Sbjct: 717 PPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 160/558 (28%), Positives = 295/558 (52%), Gaps = 14/558 (2%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN 97
           E L +L T   M + G  V +  F  +++ CA L+ L+ G ++H  +LK G     ++ N
Sbjct: 79  EALGILNT---MILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLEN 135

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
           +L++MYAKC     AR++FD + ++ ++V W ++I A+ A  Q LEA   +  M+  G  
Sbjct: 136 TLLSMYAKCGSLTDARRVFDGIRDR-NIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            +  TFV+ L A  +     +G ++H    K+G  L+  V  +L+ MYA+CG +++A  +
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             +L  K+ V+W  ++ G+ Q      A++   ++Q A   P+++   + +        L
Sbjct: 255 FDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLAL 314

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
            +GK++H Y I+ G+  ++ + N L+ MY KC  +    ++F  +  +D ++WT ++ GY
Sbjct: 315 EHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGY 374

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
           AQ   H +A++LFR +Q +G+  D M   S L +CS    + + K IH  ++  G S D+
Sbjct: 375 AQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDV 434

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            + +A+V +Y KCG++D +R VF  +  ++VV+WT+MI+    +G   EALE F  M + 
Sbjct: 435 YLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQ 494

Query: 457 NVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
            ++ D +T  S LSA + + ++++G K      +  G        S  VD+  R G L+ 
Sbjct: 495 GIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEE 554

Query: 516 A-NKVFNCVQTKDLILWTSMINANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLY 571
           A N +          +W ++++A  +H    RG+ A +   K++ +    D   ++AL  
Sbjct: 555 AENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPD----DDGAYVALSN 610

Query: 572 ACSHSGLINEGKKFLEIM 589
             + +G   + +K  ++M
Sbjct: 611 IYAAAGRYEDAEKVRQVM 628



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 241/439 (54%), Gaps = 4/439 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA ++FD +  R + +W AM+ A+V+  + L   + Y  M++ G   D  T
Sbjct: 140 MYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVT 199

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ A    + L  G K+H  + K G +    +  SLV MYAKC D  KA+ +FD++ 
Sbjct: 200 FVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLP 259

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK +VV W  +I+ Y+  GQ   AL L  +MQ+  +  N  T+ + LQ C        G 
Sbjct: 260 EK-NVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGK 318

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   ++SG   +++V NALI MY +CG + EA  +   L ++D V+W +M+TG+ Q  
Sbjct: 319 KVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLG 378

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +A+  FR +Q  G KPD++   +A+++      L  GK +H   +  G+  D+ + +
Sbjct: 379 FHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQS 438

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYAKC  ++    VF QM+ ++ ++WT +I G AQ+    +ALE F  ++ +G+  
Sbjct: 439 ALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKP 498

Query: 361 DVMIIGSVLMACSGLKCMSQ-TKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNV 418
           D +   SVL AC+ +  + +  K      +  G+  +V   +  VD+ G+ G+++ + NV
Sbjct: 499 DKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENV 558

Query: 419 FESIESKDVVS-WTSMISS 436
             ++  +   S W +++S+
Sbjct: 559 ILTMPFQPGPSVWGALLSA 577


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 315/785 (40%), Positives = 466/785 (59%), Gaps = 6/785 (0%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
           + D FTFPCVIKAC    D   G  IHG+V+K G     F+ N+L+AMY K      A +
Sbjct: 28  NADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVK 87

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ--RVGLVTNAYTFVAALQACED 172
           +F  M  + ++V WNSIIS +S +G   +   +  EM     GL+ +  T V  L  C  
Sbjct: 88  VFHYMPVR-NLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAR 146

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
                +G+ IH   VK G +  V V N+L+ MY++CG +TEA  +  +   K++VSWN+M
Sbjct: 147 EVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTM 206

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           + G        +A   FRE+Q     + ++V  +N + A   +  L + KELH Y+I+ G
Sbjct: 207 IGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHG 266

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F  D  + N  +  YAKC  +    RVFY M  +   SW  +I G AQN    KAL L+ 
Sbjct: 267 FQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYI 326

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCG 410
            +   GL  D   IGS+L+A + LK +   KE+HG+++R GL  D  I  +++ +Y  CG
Sbjct: 327 QMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCG 386

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
               +R +F+ +E K  VSW +MIS Y  NGL  +AL LF  +     +   I +VS L 
Sbjct: 387 ESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLG 446

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           A S  S L+ GKE + + ++     +  VA S +DMYA+ G +  +  VF+ ++ KDL  
Sbjct: 447 ACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLAS 506

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W ++I A G+HG G+ +I+LF +M      PD  TF+ +L  CSH+GL+ EG K+   M+
Sbjct: 507 WNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQ 566

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
             + ++P  EHYAC++D+LGRA  L++A + V  M  +P + VW +LL  CR     E+G
Sbjct: 567 NFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIG 626

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
           +IVA+KLLEL+P N  NYV +SN++A S +W DV +VR  ++  GL+K  G SWIE+G K
Sbjct: 627 QIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGK 686

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSER 770
           +HSF+A D    +S E+     ++ +K+ +  GY   T  VLH+V+EE+K++ L GHSE+
Sbjct: 687 VHSFVAGDNLLPQSKEMSMTWRKLEKKMCKI-GYKPNTSAVLHDVDEEKKIEKLRGHSEK 745

Query: 771 LAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCS 830
           LAI +G+L +T+G+ +RI KNLR+CVDCH+  K +S + GRE+++RD  RFHHF+ G+CS
Sbjct: 746 LAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCS 805

Query: 831 CGDYW 835
           CGDYW
Sbjct: 806 CGDYW 810



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 170/543 (31%), Positives = 275/543 (50%), Gaps = 9/543 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV--LGISVDA 58
           MYGK G V  A ++F  +  R + +WN+++  +  NG      +    M     G+  D 
Sbjct: 75  MYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDI 134

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            T   V+  CA   D+  G +IHGL +K G      + NSLV MY+KC    +A+ LFD+
Sbjct: 135 ATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDK 194

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQAC-EDSSFE 176
              +++ V WN++I      G   EA  LFREMQ +  +  N  T +  L AC E S   
Sbjct: 195 -NNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLR 253

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +L  E+H  +++ G      VAN  +A YA+CG +  A  V Y +E K   SWN+++ G 
Sbjct: 254 SL-KELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGC 312

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            QN    KA+  + ++  +G  PD     + + AS  L +L  GKE+H + ++ G   D 
Sbjct: 313 AQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDS 372

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            IG +L+ +Y  C   +    +F  M  +  +SW  +I+GY+QN     AL LFR +  +
Sbjct: 373 FIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSD 432

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
           G     + + SVL ACS    +   KE H Y ++  L  D+ +  + +D+Y K G I  S
Sbjct: 433 GFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKES 492

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           R+VF+ +++KD+ SW ++I++Y  +G   E++ELF  M +     D  T +  L+  S  
Sbjct: 493 RSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHA 552

Query: 476 SILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK-VFNCVQTKDLILWTS 533
            ++++G K  N      G   +    + ++DM  R G LD A + V    +  D  +W+S
Sbjct: 553 GLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSS 612

Query: 534 MIN 536
           +++
Sbjct: 613 LLS 615



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 6/207 (2%)

Query: 438 VH-NGLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
           VH N L ++A+++F  L+ +    +D+ T    + A +       G+ ++G +I+ G  L
Sbjct: 5   VHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLL 64

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  V ++L+ MY + G +D A KVF+ +  ++L+ W S+I+    +G  K   D+  +M 
Sbjct: 65  DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMM 124

Query: 556 A--ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           A  E   PD  T + +L  C+    +  G + +  +     L         LVD+  +  
Sbjct: 125 AGEEGLLPDIATLVTVLPVCAREVDVQMGIR-IHGLAVKLGLSEDVRVNNSLVDMYSKCG 183

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGA 640
           +L EA Q +        A  W  ++G 
Sbjct: 184 YLTEA-QMLFDKNNRKNAVSWNTMIGG 209


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 301/765 (39%), Positives = 452/765 (59%), Gaps = 3/765 (0%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           K+L      H  ++     +  F+   LV  Y+       AR +FD+  + + + L N++
Sbjct: 43  KNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGL-LCNAM 101

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           +  Y  SG+  E L LF  M+   L  ++ +   AL+AC  S    +GMEI ++ V+ G 
Sbjct: 102 LCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGM 161

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
               +V +++I+   + GK+ EA  V   + NKD V WNS++ G+VQ   +  A Q F E
Sbjct: 162 EKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFE 221

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           + G+G KP  +   + + A G +GNL  GK +H Y +  G  +D+ +  + +DMY+K   
Sbjct: 222 MHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGD 281

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           +     VFY+M  ++ +SW  +I+G  +N    ++ +LF  +       D+  I S+L  
Sbjct: 282 IESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQG 341

Query: 372 CSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           CS    ++  K +HG  IR   S+L++  AIVD+Y KCG++  +  VF  ++ ++V++WT
Sbjct: 342 CSQTASLATGKILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWT 401

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           +M+     NG A +AL LF  M E  + ++S+T VS + + + L  LK+G+ ++G + R 
Sbjct: 402 AMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRL 461

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKVAIDL 550
           GF  +    ++LVDMYA+CG +++A ++F+    +KD++LW SMI   G+HG G  A+ +
Sbjct: 462 GFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGI 521

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLG 610
           ++KM  E   P+  TFL+LL ACSHS L+ +G      M  D+ + P  +HYACLVDLL 
Sbjct: 522 YHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLS 581

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVL 670
           RA   EEA   +  M  +P   V  ALL  CR H N  LG   + KLL LD  NPG Y++
Sbjct: 582 RAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIM 641

Query: 671 ISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKK 730
           +SN++A +R+W  V+ +R  MR  GLKKTPG S +E GN +H+F A D SH   +EIY  
Sbjct: 642 LSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHF 701

Query: 731 LAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITK 790
           L  +   +E   GYV  T  VL +V+EE KV+ML+GHSERLAIA+G+L +  GSLIRITK
Sbjct: 702 LESLRSAVETS-GYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITK 760

Query: 791 NLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           NLRVC DCH+  K +S++  RE++VRDANRFHHF  G CSCGDYW
Sbjct: 761 NLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/523 (30%), Positives = 270/523 (51%), Gaps = 9/523 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y    S+  A  +FD+  Q      NAML  Y+ +G     LE +  MR   + VD+ + 
Sbjct: 74  YSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSC 133

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              +KACA   D + G +I    ++ G +   F+ +S+++   K     +A+++FD M  
Sbjct: 134 TFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPN 193

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DVV WNSII  Y  +G    A  LF EM   G+  +  T  + +QAC       LG  
Sbjct: 194 K-DVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKC 252

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +  G    + V  + + MY++ G +  A  V Y++  ++ VSWN+M++G V+N L
Sbjct: 253 MHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGL 312

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             ++   F  L  +    D    V+ +    +  +L  GK LH  AI+  F S+L +   
Sbjct: 313 VGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTA 371

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++D+Y+KC  +     VF +M  ++ I+WT ++ G AQN     AL LF  +Q EG+ A+
Sbjct: 372 IVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAAN 431

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
            +   S++ +C+ L  + + + IHG++ R G + D+V + A+VD+Y KCG I+ +  +F 
Sbjct: 432 SVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFS 491

Query: 421 --SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
             SI SKDVV W SMI+ Y  +G   +A+ +++ M E  ++ +  T +S LSA S   ++
Sbjct: 492 HGSI-SKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLV 550

Query: 479 KKGKELNGFIIRKG--FNLEGSVASSLVDMYARCGALDIANKV 519
           ++G  L   + R      +E   A  LVD+ +R G  + A  +
Sbjct: 551 EQGISLFNSMERDHNIRPIEKHYA-CLVDLLSRAGRFEEAQAL 592



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 138/271 (50%), Gaps = 3/271 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  A  +F K+  R + +WNAM+   V NG      + + R+       D  T
Sbjct: 275 MYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTT 334

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +++ C+    L  G  +HG  ++  ++S   +  ++V +Y+KC   ++A  +F+RM 
Sbjct: 335 IVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMK 393

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ +V+ W +++   + +G   +AL LF +MQ  G+  N+ TFV+ + +C        G 
Sbjct: 394 DR-NVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGR 452

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQN 239
            IH    + G    +    AL+ MYA+CGK+  A  +      +KD V WNSM+TG+  +
Sbjct: 453 SIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMH 512

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
               +A+  + ++   G KP+Q   ++ +SA
Sbjct: 513 GHGYQAVGIYHKMIEEGLKPNQTTFLSLLSA 543



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 118/224 (52%), Gaps = 3/224 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCGS+  A  +F+++  R V TW AML     NG     L  +++M+  GI+ ++ T
Sbjct: 375 LYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVT 434

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ +CA L  L  G  IHG + + G+      + +LV MYAKC     A ++F    
Sbjct: 435 FVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGS 494

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             +DVVLWNS+I+ Y   G   +A+G++ +M   GL  N  TF++ L AC  S     G+
Sbjct: 495 ISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGI 554

Query: 181 EIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLE 222
            +   +++   N++    +   L+ + +R G+  EA  ++ ++ 
Sbjct: 555 SLF-NSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMP 597


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 309/762 (40%), Positives = 465/762 (61%), Gaps = 14/762 (1%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +H L++  G   + FI   LV +YA   D   +R  FD++ +K DV  WNS+ISAY  +G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQK-DVYAWNSMISAYVHNG 196

Query: 140 QCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETL--GMEIHAATVKSGQNLQVY 196
              EA+G F ++  V  +  + YTF   L+AC      TL  G +IH    K G    V+
Sbjct: 197 HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG-----TLVDGRKIHCWAFKLGFQWNVF 251

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           VA +LI MY+R G    A  +   +  +D  SWN+M++G +QN    +A+    E++  G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            K + V  V+ +    +LG++     +H Y IK G   DL + N L++MYAK   +    
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           + F QM   D +SW +IIA Y QN+  + A   F  +QL G   D++ + S+    +  +
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431

Query: 377 CMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
               ++ +HG+I+R+G  + D+VI NA+VD+Y K G +D +  VFE I  KDV+SW ++I
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLI 491

Query: 435 SSYVHNGLANEALELFYLMNE-ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           + Y  NGLA+EA+E++ +M E   +  +  T VS L A + +  L++G +++G +I+   
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNL 551

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
           +L+  VA+ L+D+Y +CG L  A  +F  V  +  + W ++I+ +G+HG  +  + LF +
Sbjct: 552 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGE 611

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           M  E   PDH+TF++LL ACSHSG + EGK    +M+ +Y + P  +HY C+VDLLGRA 
Sbjct: 612 MLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAG 670

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISN 673
           +LE AY F++ M ++P A +W ALLGACR+H N ELG+  + +L E+D  N G YVL+SN
Sbjct: 671 YLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSN 730

Query: 674 VFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
           ++A   KW+ V++VR   R  GLKKTPG S IE+  K+  F   ++SH +  EIY++L  
Sbjct: 731 IYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRV 790

Query: 734 ITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLR 793
           +T K+ +  GY+    FVL +VEE+EK  +L  HSERLAIA+G++ +   S IRI KNLR
Sbjct: 791 LTAKM-KSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLR 849

Query: 794 VCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           VC DCH+  K +SR+  RE+VVRD+NRFHHF+ G+CSCGDYW
Sbjct: 850 VCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 178/580 (30%), Positives = 308/580 (53%), Gaps = 14/580 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           +Y   G V  +   FD++ Q+ V+ WN+M+ AYV NG     +  + ++ ++  I  D +
Sbjct: 160 LYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFY 219

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP V+KAC  L D   G KIH    K G+    F+  SL+ MY++      AR LFD M
Sbjct: 220 TFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDM 276

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + D+  WN++IS    +G   +AL +  EM+  G+  N  T V+ L  C      +  
Sbjct: 277 PFR-DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTA 335

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           M IH   +K G    ++V+NALI MYA+ G + +A     Q+   D VSWNS++  + QN
Sbjct: 336 MLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQN 395

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV-SDLQI 298
           D    A  FF ++Q  G +PD +  V+  S   +  +  N + +H + +++G++  D+ I
Sbjct: 396 DDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVI 455

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV-QLEG 357
           GN ++DMYAK   ++   +VF  +  +D ISW T+I GYAQN    +A+E+++ + + + 
Sbjct: 456 GNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKE 515

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           +  +     S+L A + +  + Q  +IHG +I+  L  D+ +   ++DVYGKCG +  + 
Sbjct: 516 IIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAM 575

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           ++F  +  +  V+W ++IS +  +G A + L+LF  M +  V+ D +T VS LSA S   
Sbjct: 576 SLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSG 635

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMI 535
            +++GK     +   G          +VD+  R G L++A + + +     D  +W +++
Sbjct: 636 FVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALL 695

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
            A  +HG    GK A D  +++++++    +   L+ +YA
Sbjct: 696 GACRIHGNIELGKFASDRLFEVDSKNVG--YYVLLSNIYA 733



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 145/292 (49%), Gaps = 5/292 (1%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
            K LHA  +  G V  + I   L+++YA    V+     F Q+  +D  +W ++I+ Y  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194

Query: 340 NNCHLKALELFRTVQL-EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLV 397
           N    +A+  F  + L   +  D      VL AC  L      ++IH +  + G   ++ 
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTL---VDGRKIHCWAFKLGFQWNVF 251

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           +  +++ +Y + G    +R++F+ +  +D+ SW +MIS  + NG A +AL++   M    
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           ++ + +T+VS L     L  +     ++ ++I+ G   +  V+++L++MYA+ G L+ A 
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           K F  +   D++ W S+I A   +     A   F KM+   F PD +T ++L
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL 423


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 305/828 (36%), Positives = 484/828 (58%), Gaps = 9/828 (1%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           ++QLFD+  Q+ +   N +L  +  N +    L  +  +R  G   D  +  CV+K C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L D   G ++H   +KCG+     +  SLV MY K        ++FD M  K +VV W S
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVK-NVVSWTS 163

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +++ Y  +G   +AL LF +MQ  G+  N +TF A L           G+++H   +KSG
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +  ++V N+++ MY++   +++A  V   +EN+++VSWNSM+ GFV N L  +A + F 
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            ++  G K  Q      +     +  +   K+LH   IK G   DL I   LM  Y+KC 
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343

Query: 311 CVNYMGRVFYQMTA-QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
            ++   ++F  M   Q+ +SWT II+GY QN    +A+ LF  ++ EG+  +     ++L
Sbjct: 344 EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTIL 403

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            A + +       +IH  +++    +   +  A+ D Y K G+ + +  +FE I+ KD+V
Sbjct: 404 TANAAV----SPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIV 459

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILKKGKELNGF 487
           +W++M+S Y   G    A+++F  + +  VE +  T  S L+A A+  + +++GK+ +  
Sbjct: 460 AWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSC 519

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
            I+ GF+    V+S+LV MYA+ G ++ AN+VF     +DL+ W SMI+    HG GK +
Sbjct: 520 SIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKS 579

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           + +F +M +++   D ITF+ ++ AC+H+GL+NEG+++ ++M  DY + P  EHY+C+VD
Sbjct: 580 LKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVD 639

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
           L  RA  LE+A   +  M     A +W  LL ACRVH N +LGE+ A+KL+ L P +   
Sbjct: 640 LYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAA 699

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
           YVL+SN++A +  W++  +VR  M    +KK  G SWIE+ NK  SF+A D SH +SD I
Sbjct: 700 YVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRI 759

Query: 728 YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIR 787
           Y KL E++ +L ++ GY   T++VLH+VEEE K  +L  HSERLAIA+G++ +  G+ I+
Sbjct: 760 YLKLEELSIRL-KDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQ 818

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           I KNLRVC DCH+  KL+S++ GR++VVRD+NRFHHF+ G CSCGDYW
Sbjct: 819 IVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 296/547 (54%), Gaps = 12/547 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K  SV D E++FD++  + V +W ++L  Y  NG   + L+ +S+M++ GI  + FT
Sbjct: 136 MYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFT 195

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+   A    ++ G ++H +V+K G DST F+ NS+V MY+K      A+ +FD M 
Sbjct: 196 FAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM- 254

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  + V WNS+I+ +  +G  LEA  LF  M+  G+      F   ++ C +    +   
Sbjct: 255 ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAK 314

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLTGFVQN 239
           ++H   +K+G +  + +  AL+  Y++C ++ +A  +   +   ++ VSW ++++G+VQN
Sbjct: 315 QLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQN 374

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +AM  F +++  G +P+       ++A+      ++  ++HA  +K  + +   +G
Sbjct: 375 GRTDRAMNLFCQMRREGVRPNHFTYSTILTANA----AVSPSQIHALVVKTNYENSPSVG 430

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L D Y+K    N   ++F  +  +D ++W+ +++GYAQ      A+++F  +  EG++
Sbjct: 431 TALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVE 490

Query: 360 ADVMIIGSVLMACSGLKC-MSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRN 417
            +     SVL AC+     + Q K+ H   I+ G S+ L + +A+V +Y K GNI+ +  
Sbjct: 491 PNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANE 550

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+    +D+VSW SMIS Y  +G   ++L++F  M   N+E D IT +  +SA +   +
Sbjct: 551 VFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGL 610

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSM 534
           + +G+     ++ K +++  ++   S +VD+Y+R G L+ A  + N +       +W ++
Sbjct: 611 VNEGQRYFDLMV-KDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTL 669

Query: 535 INANGLH 541
           + A  +H
Sbjct: 670 LAACRVH 676


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 287/784 (36%), Positives = 475/784 (60%), Gaps = 3/784 (0%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G  VD++ +  ++++C   KDL  G ++H  +L+ G     +I+N+L+ +Y  C    +A
Sbjct: 39  GSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEA 98

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           R+LFD+   K  VV WN +IS Y+  G   EA  LF  MQ+ GL  + +TFV+ L AC  
Sbjct: 99  RRLFDKFSNK-SVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSS 157

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
            +    G E+H   +++G      V NALI+MYA+CG + +A  V   + ++D VSW ++
Sbjct: 158 PAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTL 217

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
              + ++    ++++ +  +   G +P ++  +N +SA G L  L  GK++HA  ++   
Sbjct: 218 TGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEH 277

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            SD+++   L  MY KC  V     VF  +  +D I+W T+I G   +    +A  +F  
Sbjct: 278 HSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHR 337

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGN 411
           +  E +  D +   ++L AC+    ++  KEIH   ++ GL SD+   NA++++Y K G+
Sbjct: 338 MLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGS 397

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           +  +R VF+ +  +DVVSWT+++  Y   G   E+   F  M +  VE++ IT +  L A
Sbjct: 398 MKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKA 457

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            S+   LK GKE++  +++ G   + +VA++L+ MY +CG+++ A +V   + T+D++ W
Sbjct: 458 CSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTW 517

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            ++I     +GRG  A+  F  M++E   P+  TF+ ++ AC    L+ EG++    MR 
Sbjct: 518 NTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRK 577

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
           DY + P  +HYAC+VD+L RA HL EA   + +M  +P+A +W ALL ACR H N E+GE
Sbjct: 578 DYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGE 637

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
             A++ L+L+P N G YV +S ++AA+  W+DV ++R  M+  G+KK PG SWIE+  ++
Sbjct: 638 QAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEV 697

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
           HSF+A D+SH  ++EIY +L  +T+++ +  GYV  T+FV+H++++E K + +  HSE+L
Sbjct: 698 HSFVAGDQSHPRTEEIYSELEALTKQI-KSLGYVPDTRFVMHDLDQEGKERAVCHHSEKL 756

Query: 772 AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           AIAYG++ +   + IR++KNLRVC DCH+  K +S++ GRE++ RDA+RFHHF+ G CSC
Sbjct: 757 AIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSC 816

Query: 832 GDYW 835
           GDYW
Sbjct: 817 GDYW 820



 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 183/597 (30%), Positives = 324/597 (54%), Gaps = 13/597 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CGSV +A +LFDK S ++V +WN M+  Y   G        ++ M+  G+  D FT
Sbjct: 88  LYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFT 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ AC+    L+ G ++H  V++ G  +   + N+L++MYAKC   R AR++FD M 
Sbjct: 148 FVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMA 207

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V W ++  AY+ SG   E+L  +  M + G+  +  T++  L AC   +    G 
Sbjct: 208 SR-DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGK 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  V+S  +  V V+ AL  MY +CG + +A  V   L N+D ++WN+M+ G V + 
Sbjct: 267 QIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSG 326

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F  +      PD+V  +  +SA  R G L  GKE+HA A+K G VSD++ GN
Sbjct: 327 QLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGN 386

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++MY+K   +    +VF +M  +D +SWT ++ GYA     +++   F+ +  +G++A
Sbjct: 387 ALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEA 446

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           + +    VL ACS    +   KEIH  +++ G+ +DL + NA++ +Y KCG+++ +  V 
Sbjct: 447 NKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVS 506

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E + ++DVV+W ++I     NG   EAL+ F +M    +  ++ T V+ +SA    ++++
Sbjct: 507 EGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVE 566

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           +G+      +RK + +  +    + +VD+ AR G L  A  V   +  K    +W +++ 
Sbjct: 567 EGRRQFAS-MRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLA 625

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           A   HG    G+ A +   K+E ++      T+++L +  + +G+  +  K  ++M+
Sbjct: 626 ACRAHGNVEIGEQAAEQCLKLEPQNAG----TYVSLSFIYAAAGMWRDVAKLRKLMK 678



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 236/440 (53%), Gaps = 1/440 (0%)

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           + + + + G   ++Y +V  LQ+C  +    +G ++H   ++ G    VY+ N L+ +Y 
Sbjct: 31  VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
            CG + EA  +  +  NK  VSWN M++G+    L  +A   F  +Q  G +PD+   V+
Sbjct: 91  HCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVS 150

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            +SA      L  G+E+H   ++ G  ++  +GN L+ MYAKC  V    RVF  M ++D
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRD 210

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SWTT+   YA++    ++L+ +  +  EG+    +   +VL AC  L  + + K+IH 
Sbjct: 211 EVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHA 270

Query: 387 YIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
            I+  +  SD+ +  A+  +Y KCG +  +R VFE + ++DV++W +MI   V +G   E
Sbjct: 271 QIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEE 330

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A  +F+ M +  V  D +T ++ LSA +    L  GKE++   ++ G   +    ++L++
Sbjct: 331 AHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALIN 390

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY++ G++  A +VF+ +  +D++ WT+++      G+   +   F KM  +    + IT
Sbjct: 391 MYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKIT 450

Query: 566 FLALLYACSHSGLINEGKKF 585
           ++ +L ACS+   +  GK+ 
Sbjct: 451 YMCVLKACSNPVALKWGKEI 470



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 141/251 (56%), Gaps = 2/251 (0%)

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVY 406
           ++ + +  +G   D      +L +C   K ++  K++H +I+R G+  ++ I+N ++ +Y
Sbjct: 30  DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
             CG+++ +R +F+   +K VVSW  MIS Y H GL  EA  LF LM +  +E D  T V
Sbjct: 90  VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           S LSA SS + L  G+E++  ++  G     +V ++L+ MYA+CG++  A +VF+ + ++
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR 209

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF- 585
           D + WT++  A    G  + ++  ++ M  E   P  IT++ +L AC     + +GK+  
Sbjct: 210 DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269

Query: 586 LEIMRCDYQLD 596
            +I+  ++  D
Sbjct: 270 AQIVESEHHSD 280


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 290/784 (36%), Positives = 468/784 (59%), Gaps = 3/784 (0%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G  +D+ T+  + + C  L+D   G ++   +++ G     + +N+L+ +Y+ C +  +A
Sbjct: 52  GNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEA 111

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           RQ+FD + E + VV WN++I+ Y+  G   EA  LFR+M   GL  +  TF++ L AC  
Sbjct: 112 RQIFDSV-ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSS 170

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
            +    G E+HA  V +G      +  AL++MY + G M +A  V   L  +D  ++N M
Sbjct: 171 PAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVM 230

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           + G+ ++  + KA + F  +Q  G KP+++  ++ +        L  GK +HA  +  G 
Sbjct: 231 VGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGL 290

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
           V D+++  +L+ MY  C  +    RVF  M  +D +SWT +I GYA+N     A  LF T
Sbjct: 291 VDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFAT 350

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGN 411
           +Q EG+  D +    ++ AC+    ++  +EIH  +   G  +DL++  A+V +Y KCG 
Sbjct: 351 MQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGA 410

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           I  +R VF+++  +DVVSW++MI +YV NG   EA E F+LM  +N+E D +T ++ L+A
Sbjct: 411 IKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNA 470

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
              L  L  G E+    I+        + ++L+ M A+ G+++ A  +F+ +  +D+I W
Sbjct: 471 CGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITW 530

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            +MI    LHG  + A+ LF +M  E F P+ +TF+ +L ACS +G ++EG++F   +  
Sbjct: 531 NAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLE 590

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
              + P  + Y C+VDLLGRA  L+EA   ++SM ++PT+ +W +LL ACR+H N ++ E
Sbjct: 591 GRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAE 650

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
             A++ L +DP +   YV +S+++AA+  W++V +VR  M   G++K  G +WIE+  K+
Sbjct: 651 RAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKV 710

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
           H+F+  D+SH    EIY +LA +   ++RE GY+  TQ VLH+V E++K + +  HSE+L
Sbjct: 711 HTFVVEDRSHPLVGEIYAELARLMNAIKRE-GYIPITQNVLHDVGEQQKEEAISYHSEKL 769

Query: 772 AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           AIAYGVL    G+ IRI KNLRVC DCHS  K +S++ GRE++ RDA+RFHHF+ GVCSC
Sbjct: 770 AIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSC 829

Query: 832 GDYW 835
           GDYW
Sbjct: 830 GDYW 833



 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 168/550 (30%), Positives = 279/550 (50%), Gaps = 4/550 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CG+V +A Q+FD V  +TV TWNA++  Y   G        + +M   G+     T
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIIT 160

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC+    L+ G ++H  V+  G+ S   I  +LV+MY K      ARQ+FD + 
Sbjct: 161 FLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGL- 219

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              DV  +N ++  Y+ SG   +A  LF  MQ+VGL  N  +F++ L  C        G 
Sbjct: 220 HIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGK 279

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  + +G    + VA +LI MY  CG +  A  V   ++ +D VSW  M+ G+ +N 
Sbjct: 280 AVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENG 339

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A   F  +Q  G +PD++  ++ ++A     NL + +E+H+     GF +DL +  
Sbjct: 340 NIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVST 399

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYAKC  +    +VF  M  +D +SW+ +I  Y +N    +A E F  ++   ++ 
Sbjct: 400 ALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEP 459

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVF 419
           D +   ++L AC  L  +    EI+   I+  L   V L NA++ +  K G+++ +R +F
Sbjct: 460 DGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIF 519

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           +++  +DV++W +MI  Y  +G A EAL LF  M +     +S+T V  LSA S    + 
Sbjct: 520 DTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVD 579

Query: 480 KGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMINA 537
           +G+    +++  +G      +   +VD+  R G LD A  +   +  K    +W+S++ A
Sbjct: 580 EGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVA 639

Query: 538 NGLHGRGKVA 547
             +HG   VA
Sbjct: 640 CRIHGNLDVA 649



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 184/378 (48%), Gaps = 4/378 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CGS+  A ++FD +  R V +W  M+  Y  NG        ++ M+  GI  D  T
Sbjct: 303 MYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRIT 362

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++ ACA+  +L+   +IH  V   G+ +   +  +LV MYAKC   + ARQ+FD M 
Sbjct: 363 YMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAM- 421

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV W+++I AY  +G   EA   F  M+R  +  +  T++  L AC       +GM
Sbjct: 422 PRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGM 481

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EI+   +K+     V + NALI M A+ G +  A  +   +  +D ++WN+M+ G+  + 
Sbjct: 482 EIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHG 541

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK-QGFVSDLQIG 299
              +A+  F  +     +P+ V  V  +SA  R G +  G+    Y ++ +G V  +++ 
Sbjct: 542 NAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLY 601

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTT-IIAGYAQNNCHLKALELFRTVQLEG 357
             ++D+  +   ++    +   M  +   S W++ ++A     N  +      R + ++ 
Sbjct: 602 GCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDP 661

Query: 358 LDADVMIIGSVLMACSGL 375
            D  V +  S + A +G+
Sbjct: 662 YDGAVYVQLSHMYAAAGM 679



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 3/150 (2%)

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           S++     AN+ L+    + E     DS T V      + L     GK++   II+ G  
Sbjct: 33  STFTRRVGANDVLQR---LGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQ 89

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
           L     ++L+ +Y+ CG +  A ++F+ V+ K ++ W ++I      G  K A  LF +M
Sbjct: 90  LNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQM 149

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKK 584
             E   P  ITFL++L ACS    +N GK+
Sbjct: 150 VDEGLEPSIITFLSVLDACSSPAGLNWGKE 179


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 304/789 (38%), Positives = 485/789 (61%), Gaps = 18/789 (2%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D  T   V++ CA  K L  G ++   +   G+     + + L  MY  C D ++A ++
Sbjct: 92  IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD + + E  + WN +++  + SG    ++GLF++M   G+  ++YTF     +C   SF
Sbjct: 152 FDEV-KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF-----SCVSKSF 205

Query: 176 ETL-----GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
            +L     G ++H   +KSG   +  V N+L+A Y +  ++  A  V  ++  +D +SWN
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 265

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPD--QVCTVNAVSASGRLGNLLNGKELHAYAI 288
           S++ G+V N L  K +  F ++  +G + D   + +V A  A  RL +L  G+ +H+  +
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGV 323

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K  F  + +  NTL+DMY+KC  ++    VF +M+ +  +S+T++IAGYA+     +A++
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYG 407
           LF  ++ EG+  DV  + +VL  C+  + + + K +H +I    L  D+ + NA++D+Y 
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLV 466
           KCG++  +  VF  +  KD++SW ++I  Y  N  ANEAL LF  L+ E     D  T+ 
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
             L A +SLS   KG+E++G+I+R G+  +  VA+SLVDMYA+CGAL +A+ +F+ + +K
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK 563

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           DL+ WT MI   G+HG GK AI LF +M       D I+F++LLYACSHSGL++EG +F 
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 623

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
            IMR + +++P  EHYAC+VD+L R   L +AY+F+ +M I P A +W ALL  CR+H +
Sbjct: 624 NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHD 683

Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            +L E VA+K+ EL+P N G YVL++N++A + KW+ V+++R R+   GL+K PG SWIE
Sbjct: 684 VKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743

Query: 707 IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
           I  +++ F+A D S+ E++ I   L ++  ++  E GY   T++ L + EE EK + L G
Sbjct: 744 IKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEE-GYSPLTKYALIDAEEMEKEEALCG 802

Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
           HSE+LA+A G++ S  G +IR+TKNLRVC DCH   K +S+L  RE+V+RD+NRFH F+ 
Sbjct: 803 HSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKD 862

Query: 827 GVCSCGDYW 835
           G CSC  +W
Sbjct: 863 GHCSCRGFW 871



 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 195/579 (33%), Positives = 312/579 (53%), Gaps = 10/579 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG + +A ++FD+V       WN ++     +G+    +  + +M   G+ +D++T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F CV K+ + L+ +  G ++HG +LK G+   + + NSLVA Y K      AR++FD M 
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DV+ WNSII+ Y ++G   + L +F +M   G+  +  T V+    C DS   +LG 
Sbjct: 258 ER-DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H+  VK+  + +    N L+ MY++CG +  A  V  ++ ++  VS+ SM+ G+ +  
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAV-SASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           L  +A++ F E++  G  PD V TV AV +   R   L  GK +H +  +     D+ + 
Sbjct: 377 LAGEAVKLFEEMEEEGISPD-VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-L 358
           N LMDMYAKC  +     VF +M  +D ISW TII GY++N    +AL LF  +  E   
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRN 417
             D   +  VL AC+ L    + +EIHGYI+R G  SD  + N++VD+Y KCG +  +  
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 555

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F+ I SKD+VSWT MI+ Y  +G   EA+ LF  M +A +E+D I+ VS L A S   +
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 615

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANK-VFNCVQTKDLILWTSM 534
           + +G      I+R    +E +V   + +VDM AR G L  A + + N     D  +W ++
Sbjct: 616 VDEGWRFFN-IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674

Query: 535 INANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYA 572
           +    +H   K+A  +  K+ E E     +   +A +YA
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYA 713



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 131/270 (48%), Gaps = 6/270 (2%)

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
           D D   + SVL  C+  K +   KE+  +I   G   D  + + +  +Y  CG++  +  
Sbjct: 91  DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ ++ +  + W  +++    +G  + ++ LF  M  + VE DS T      + SSL  
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           +  G++L+GFI++ GF    SV +SLV  Y +   +D A KVF+ +  +D+I W S+IN 
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF--LEIMRCDYQL 595
              +G  +  + +F +M       D  T +++   C+ S LI+ G+    + +  C  + 
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           D +      L+D+  +   L+ A    R M
Sbjct: 331 DRFCN---TLLDMYSKCGDLDSAKAVFREM 357


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 309/762 (40%), Positives = 463/762 (60%), Gaps = 14/762 (1%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +H L++  G   + FI   LV +YA   D   +R  FD++ +K DV  WNS+ISAY  +G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQK-DVYTWNSMISAYVHNG 196

Query: 140 QCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETL--GMEIHAATVKSGQNLQVY 196
              EA+G F ++  V  +  + YTF   L+AC      TL  G  IH    K G    V+
Sbjct: 197 HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG-----TLVDGRRIHCWAFKLGFQWNVF 251

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           VA +LI MY+R G    A  +   +  +D  SWN+M++G +QN    +A+    E++  G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            K + V  V+ +    +LG++     +H Y IK G   DL + N L++MYAK   +    
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           + F QM   D +SW +IIA Y QN+  + A   F  +QL G   D++ + S+    +  +
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431

Query: 377 CMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
               ++ +HG+I+R+G  + D+VI NA+VD+Y K G +D +  VFE I  KDV+SW ++I
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLI 491

Query: 435 SSYVHNGLANEALELFYLMNE-ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           + Y  NGLA+EA+E++ +M E   +  +  T VS L A + +  L++G  ++G +I+   
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNL 551

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
           +L+  VA+ L+D+Y +CG L  A  +F  V  +  + W ++I+ +G+HG  +  + LF +
Sbjct: 552 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGE 611

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           M  E   PDH+TF++LL ACSHSG + EGK    +M+ +Y + P  +HY C+VDLLGRA 
Sbjct: 612 MLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAG 670

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISN 673
           +LE AY F++ M ++P A +W ALLGACR+H N ELG+  + +L E+D  N G YVL+SN
Sbjct: 671 YLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSN 730

Query: 674 VFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
           ++A   KW+ V++VR   R  GLKKTPG S IE+  K+  F   ++SH +  EIY++L  
Sbjct: 731 IYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRV 790

Query: 734 ITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLR 793
           +T K+ +  GY+    FVL +VEE+EK  +L  HSERLAIA+G++ +   S IRI KNLR
Sbjct: 791 LTAKM-KSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLR 849

Query: 794 VCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           VC DCH+  K +SR+  RE+VVRD+NRFHHF+ G+CSCGDYW
Sbjct: 850 VCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  281 bits (720), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 178/580 (30%), Positives = 307/580 (52%), Gaps = 14/580 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           +Y   G V  +   FD++ Q+ V+TWN+M+ AYV NG     +  + ++ ++  I  D +
Sbjct: 160 LYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFY 219

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP V+KAC  L D   G +IH    K G+    F+  SL+ MY++      AR LFD M
Sbjct: 220 TFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDM 276

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + D+  WN++IS    +G   +AL +  EM+  G+  N  T V+ L  C      +  
Sbjct: 277 PFR-DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTA 335

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           M IH   +K G    ++V+NALI MYA+ G + +A     Q+   D VSWNS++  + QN
Sbjct: 336 MLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQN 395

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV-SDLQI 298
           D    A  FF ++Q  G +PD +  V+  S   +  +  N + +H + +++G++  D+ I
Sbjct: 396 DDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVI 455

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV-QLEG 357
           GN ++DMYAK   ++   +VF  +  +D ISW T+I GYAQN    +A+E+++ + + + 
Sbjct: 456 GNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKE 515

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           +  +     S+L A + +  + Q   IHG +I+  L  D+ +   ++DVYGKCG +  + 
Sbjct: 516 IIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAM 575

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           ++F  +  +  V+W ++IS +  +G A + L+LF  M +  V+ D +T VS LSA S   
Sbjct: 576 SLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSG 635

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
            +++GK     +   G          +VD+  R G L++A      +  + D  +W +++
Sbjct: 636 FVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALL 695

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
            A  +HG    GK A D  +++++++    +   L+ +YA
Sbjct: 696 GACRIHGNIELGKFASDRLFEVDSKNVG--YYVLLSNIYA 733



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 144/291 (49%), Gaps = 5/291 (1%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K LHA  +  G V  + I   L+++YA    V+     F Q+  +D  +W ++I+ Y  N
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHN 195

Query: 341 NCHLKALELFRTVQL-EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
               +A+  F  + L   +  D      VL AC  L      + IH +  + G   ++ +
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTL---VDGRRIHCWAFKLGFQWNVFV 252

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
             +++ +Y + G    +R++F+ +  +D+ SW +MIS  + NG A +AL++   M    +
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           + + +T+VS L     L  +     ++ ++I+ G   +  V+++L++MYA+ G L+ A K
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARK 372

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
            F  +   D++ W S+I A   +     A   F KM+   F PD +T ++L
Sbjct: 373 AFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL 423


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  580 bits (1495), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 298/836 (35%), Positives = 489/836 (58%), Gaps = 3/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G V  A+ +F+++  +   +W AM+     NG     +  + +M    +    + 
Sbjct: 156 LYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYV 215

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC  ++    G ++HG ++K G  S  F+ N+LV +Y++  +   A Q+F +M 
Sbjct: 216 FSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM- 274

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D + +NS+IS  +  G    AL LF +MQ   +  +  T  + L AC        G 
Sbjct: 275 HRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGK 334

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  +K G +  + +  +L+ +Y +C  +  A       E ++ V WN ML  + Q  
Sbjct: 335 QLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLG 394

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              ++   F ++Q  G  P+Q    + +     LG L  G+++H   IK GF  ++ + +
Sbjct: 395 NLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCS 454

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAK   ++    +  ++  +D +SWT +IAGY Q++   +AL+LF+ ++ +G+ +
Sbjct: 455 VLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRS 514

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D +   S + AC+G++ ++Q ++IH      G S DL I NA+V +Y +CG    +   F
Sbjct: 515 DNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAF 574

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E I++KD +SW ++IS +  +G   EAL++F  MN+A VE++  T  SA+SA ++ + +K
Sbjct: 575 EKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIK 634

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GK+++  +I+ G++ E   ++ L+ +Y++CG+++ A + F  +  K+++ W +MI    
Sbjct: 635 QGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYS 694

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG G  A+ LF +M+     P+H+TF+ +L ACSH GL+NEG  +   M  ++ L P P
Sbjct: 695 QHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKP 754

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C+VDLLGRA  L  A +F+  M IEP A +W  LL AC VH N E+GE  A+ LLE
Sbjct: 755 EHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLE 814

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P +   YVL+SN++A S KW   ++ R  M+  G+KK PG SWIE+ N IH+F   D+
Sbjct: 815 LEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDR 874

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H  +++IY+ + ++ E+   E GYV     +L++VE+E+K    Y HSE+LA+A+G+L 
Sbjct: 875 LHPLAEQIYEYIDDLNER-AGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLS 933

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            T    IR+ KNLRVC DCH++ K VS++  R +VVRDA RFHHFE GVCSC DYW
Sbjct: 934 LTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 184/646 (28%), Positives = 329/646 (50%), Gaps = 5/646 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   G V +A +LFD +    V  WN ++   ++     +VL  +S M    ++ D  T
Sbjct: 54  IYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDEST 113

Query: 61  FPCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V++AC+  K       +IH  ++  G+ S+  + N L+ +Y+K      A+ +F+R+
Sbjct: 114 FASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL 173

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K D V W ++IS  S +G+  EA+ LF +M +  ++   Y F + L AC       LG
Sbjct: 174 FLK-DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG 232

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H   VK G + + +V NAL+ +Y+R G +  A  +  ++  +D +S+NS+++G  Q 
Sbjct: 233 EQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQR 292

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+Q F ++Q    KPD V   + +SA   +G    GK+LH+Y IK G  SDL I 
Sbjct: 293 GFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIE 352

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            +L+D+Y KC  +      F     ++ + W  ++  Y Q     ++  +F  +Q+EGL 
Sbjct: 353 GSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLM 412

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            +     S+L  C+ L  +   ++IH  +I+ G   ++ + + ++D+Y K G +D +R +
Sbjct: 413 PNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGI 472

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
            + +  +DVVSWT+MI+ Y  + L  EAL+LF  M    + SD+I   SA+SA + +  L
Sbjct: 473 LQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQAL 532

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            +G++++      G++ + S+ ++LV +YARCG    A   F  +  KD I W ++I+  
Sbjct: 533 NQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGF 592

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
              G  + A+ +F +M       +  TF + + A +++  I +GK+ +  M      D  
Sbjct: 593 AQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQ-IHAMMIKTGYDSE 651

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
            E    L+ L  +   +E+A +    M  E     W A++     H
Sbjct: 652 TEASNVLITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMITGYSQH 696



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/539 (28%), Positives = 280/539 (51%), Gaps = 5/539 (0%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M   GI  +  T+  + + C     L    K+H  + K G+D  D + + L+ +Y    +
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              A +LFD +    +V  WN +IS   A     + LGLF  M    +  +  TF + L+
Sbjct: 61  VDNAIKLFDDI-PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLR 119

Query: 169 ACE--DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           AC    + F+ +  +IHA  +  G      V N LI +Y++ G +  A  V  +L  KDS
Sbjct: 120 ACSGGKAPFQ-VTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDS 178

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           VSW +M++G  QN    +A+  F ++  +   P      + +SA  ++     G++LH +
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            +K G  S+  + N L+ +Y++   +    ++F +M  +D IS+ ++I+G AQ     +A
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDV 405
           L+LF  +QL+ +  D + + S+L AC+ +    + K++H Y+I+ G+ SDL+I  +++D+
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y KC +I+ +   F + E+++VV W  M+ +Y   G  +E+  +F  M    +  +  T 
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S L   +SL  L  G++++  +I+ GF     V S L+DMYA+ G LD A  +   ++ 
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLRE 478

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           +D++ WT+MI     H     A+ LF +ME +    D+I F + + AC+    +N+G++
Sbjct: 479 EDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQ 537



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 209/420 (49%), Gaps = 35/420 (8%)

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G+LL+ K+LHA   K GF  +  +G+ L+D+Y     V+   ++F  + + +   W  +I
Sbjct: 24  GSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVI 83

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ-TKEIHGYIIRKGL 393
           +G        + L LF  +  E +  D     SVL ACSG K   Q T++IH  II  G 
Sbjct: 84  SGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGF 143

Query: 394 -SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
            S  ++ N ++D+Y K G++D ++ VFE +  KD VSW +MIS    NG  +EA+ LF  
Sbjct: 144 GSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQ 203

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M+++ V        S LSA + + + K G++L+GFI++ G + E  V ++LV +Y+R G 
Sbjct: 204 MHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGN 263

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           L  A ++F+ +  +D I + S+I+     G    A+ LF KM+ +   PD +T  +LL A
Sbjct: 264 LIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSA 323

Query: 573 CSHSG--------------------LINEGKKFLEIMRC-------DYQLDPWPEH---Y 602
           C+  G                    LI EG      ++C       +Y L    E+   +
Sbjct: 324 CASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLW 383

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIE---PTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
             ++   G+  +L E+Y     MQIE   P    + ++L  C      +LGE +  ++++
Sbjct: 384 NVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIK 443


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 298/836 (35%), Positives = 483/836 (57%), Gaps = 3/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G V  A Q+F ++S R   +W AML  Y  +G        YS+M    +    + 
Sbjct: 87  LYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYV 146

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC   K    G  IH  V K  + S  F+ N+L+A+Y     F+ A ++F  M 
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDM- 205

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V +N++IS ++  G    AL +F EMQ  GL  +  T  + L AC        G 
Sbjct: 206 LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGK 265

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  +K+G +       +L+ +Y +CG +  A  +    +  + V WN ML  + Q  
Sbjct: 266 QLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQIS 325

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              K+ + F ++Q  G  P+Q      +      G +  G+++H+ +IK GF SD+ +  
Sbjct: 326 DLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+K  C++   ++   +  +D +SWT++IAGY Q++   +AL  F+ +Q  G+  
Sbjct: 386 VLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWP 445

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D + + S   AC+G+K M Q  +IH  +   G + D+ I N +V++Y +CG  + + ++F
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLF 505

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             IE KD ++W  +IS +  + L  +AL +F  M +A  + +  T +SA+SA ++L+ +K
Sbjct: 506 REIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIK 565

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GK+++G  ++ G   E  VA++L+ +Y +CG+++ A  +F+ +  ++ + W ++I +  
Sbjct: 566 QGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCS 625

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HGRG  A+DLF +M+ E   P+ +TF+ +L ACSH GL+ EG  + + M   Y L+P P
Sbjct: 626 QHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIP 685

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           +HYAC+VD+LGRA  L+ A +FV  M I   A +W  LL AC+VH N E+GE+ AK LLE
Sbjct: 686 DHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLE 745

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P +  +YVL+SN +A + KW + +QVR  M+  G++K PG SWIE+ N +H+F   D+
Sbjct: 746 LEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDR 805

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H  SD+IYK L+E+ ++L +  GY  +   + H  E+E+K    + HSE+LA+A+G++ 
Sbjct: 806 LHPLSDQIYKFLSELNDRLSKI-GYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMT 864

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                 +R+ KNLRVC DCHS+ K  S +  RE+V+RD  RFHHF +G CSCGDYW
Sbjct: 865 LPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 173/622 (27%), Positives = 299/622 (48%), Gaps = 15/622 (2%)

Query: 30  LGAYVSNGEPLRVLETY----SRMRVLGISVDAFTFPCVIKACAMLKD-LDCGAKIHGLV 84
           L  ++    P ++L       S  R LG S D     C ++AC    +      +IH   
Sbjct: 14  LAKFIVPDNPEKILSLVAAKASHHRALG-SAD---LTCALQACRGRGNRWPLVLEIHATS 69

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           +  G  +   I N L+ +YAK     +ARQ+F  +  + D V W +++S Y+ SG   EA
Sbjct: 70  VVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR-DHVSWVAMLSGYAQSGLGKEA 128

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
             L+ +M    ++   Y   + L AC        G  IHA   K     + +V NALIA+
Sbjct: 129 FRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIAL 188

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           Y   G    A  V   +   D V++N++++G  Q      A+Q F E+Q +G +PD V  
Sbjct: 189 YLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTV 248

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
            + ++A   +G+L  GK+LH+Y +K G   D     +L+D+Y KC  +     +F     
Sbjct: 249 ASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDR 308

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
            + + W  ++  Y Q +   K+ E+F  +Q  G+  +      +L  C+    +   ++I
Sbjct: 309 TNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQI 368

Query: 385 HGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           H   I+ G  SD+ +   ++D+Y K G +D +R + E +E +DVVSWTSMI+ YV +   
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFC 428

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
            EAL  F  M +  V  D+I L SA SA + +  +++G +++  +   G+  + S+ ++L
Sbjct: 429 EEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTL 488

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           V++YARCG  + A  +F  ++ KD I W  +I+  G     K A+ +F KM       + 
Sbjct: 489 VNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNV 548

Query: 564 ITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV 622
            TF++ + A ++   I +GK+     ++  +  +   E    L+ L G+   +E+A    
Sbjct: 549 FTFISAISALANLADIKQGKQVHGRAVKTGHTSE--TEVANALISLYGKCGSIEDAKMIF 606

Query: 623 RSMQIEPTAEVWCALLGACRVH 644
             M +      W  ++ +C  H
Sbjct: 607 SEMSLRNEVS-WNTIITSCSQH 627



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 153/578 (26%), Positives = 281/578 (48%), Gaps = 26/578 (4%)

Query: 166 ALQACEDSSFE-TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
           ALQAC        L +EIHA +V  G      + N LI +YA+ G + +A  V  +L ++
Sbjct: 48  ALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR 107

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
           D VSW +ML+G+ Q+ L  +A + + ++      P      + +SA  +      G+ +H
Sbjct: 108 DHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
           A   KQ F S+  +GN L+ +Y          RVF  M   D +++ T+I+G+AQ     
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIV 403
            AL++F  +QL GL  D + + S+L AC+ +  + + K++H Y+++ G+S D +   +++
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLL 287

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y KCG+I+ + ++F   +  +VV W  M+ +Y       ++ E+F  M    +  +  
Sbjct: 288 DLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQF 347

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T    L   +    ++ G++++   I+ GF  +  V+  L+DMY++ G LD A K+   +
Sbjct: 348 TYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEML 407

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS-----HSGL 578
           + +D++ WTSMI     H   + A+  F +M+     PD+I   +   AC+       GL
Sbjct: 408 EKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL 467

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV-WCAL 637
               + ++     D  +      +  LV+L  R    EEA+   R  +IE   E+ W  L
Sbjct: 468 QIHARVYVSGYAADISI------WNTLVNLYARCGRSEEAFSLFR--EIEHKDEITWNGL 519

Query: 638 L---GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
           +   G  R++       +V  K+ +   G   N     +  +A     D++Q + ++ G 
Sbjct: 520 ISGFGQSRLYKQ---ALMVFMKMGQ--AGAKYNVFTFISAISALANLADIKQGK-QVHGR 573

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
            + KT  +S  E+ N + S   +  S  ++  I+ +++
Sbjct: 574 AV-KTGHTSETEVANALISLYGKCGSIEDAKMIFSEMS 610


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 293/835 (35%), Positives = 487/835 (58%), Gaps = 5/835 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KC     A + FD++      +W++++ AY +NG P   ++ +  MR  G+  + F  
Sbjct: 47  YSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFAL 106

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+K    + D   GA++H + +  G+ S  F+ N+LVAMY        AR++F+    
Sbjct: 107 PVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADS 163

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + + V WN ++SAY  + QC +A+ +F EM   G+    + F   + AC  S     G +
Sbjct: 164 ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ 223

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  V+ G +  V+ ANAL+ MY + G++  A+ +  ++ + D VSWN++++G V N  
Sbjct: 224 VHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGH 283

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++   +++ +G  P+     + + A    G    G+++H + IK    SD  IG  
Sbjct: 284 DHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVG 343

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAK   ++   +VF  M  +D I    +I+G +    H +AL LF  ++ EGL  +
Sbjct: 344 LVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVN 403

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFE 420
              + +VL + + L+  S T+++H   ++ G + D  ++N ++D Y KC  +  +  VFE
Sbjct: 404 RTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFE 463

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
              S D+++ TSMI++         A++LF  M    +E D   L S L+A +SLS  ++
Sbjct: 464 ECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++  +I++ F  +    ++LV  YA+CG+++ A   F+ +  + ++ W++MI     
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 583

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG GK A++LF +M  E   P+HIT  ++L AC+H+GL++E K++   M+  + +D   E
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE 643

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY+C++DLLGRA  L++A + V SM  +  A +W ALLGA RVH + ELG++ A+KL  L
Sbjct: 644 HYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFIL 703

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           +P   G +VL++N +A++  W +V +VR  M+ S +KK P  SWIE+ +K+H+FI  DKS
Sbjct: 704 EPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKS 763

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H  + EIY KL E+ + L  + G+V      LH+++  EK  +L  HSERLA+A+ +L +
Sbjct: 764 HPMTKEIYAKLVELGD-LMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLST 822

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             G+ IR+ KNLR+C DCH   K +S++  RE+++RD NRFHHF  G CSCGDYW
Sbjct: 823 PPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 183/612 (29%), Positives = 311/612 (50%), Gaps = 30/612 (4%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           GA +H  +LK G  S     N L++ Y+KC     AR+ FD + +   V  W+S+++AYS
Sbjct: 23  GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVS-WSSLVTAYS 79

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +G    A+  F  M+  G+  N +     L+   D+    LG ++HA  + +G    V+
Sbjct: 80  NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVF 136

Query: 197 VANALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           VANAL+AMY   G M +A  V  + ++ +++VSWN +++ +V+ND    A+Q F E+  +
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196

Query: 256 GQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           G +P +    C VNA + S    N+  G+++HA  ++ G+  D+   N L+DMY K   V
Sbjct: 197 GIQPTEFGFSCVVNACTGS---RNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRV 253

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
           +    +F +M   D +SW  +I+G   N    +A+EL   ++  GL  +V  + S+L AC
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313

Query: 373 SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           SG       ++IHG++I+    SD  I   +VD+Y K   +D +R VF+ +  +D++   
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCN 373

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           ++IS   H G  +EAL LFY + +  +  +  TL + L + +SL      ++++   ++ 
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKI 433

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           GF  +  V + L+D Y +C  L  AN+VF    + D+I  TSMI A      G+ AI LF
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLF 493

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLG 610
            +M  +   PD     +LL AC+      +GK+    +++  +  D +  +   LV    
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN--ALVYTYA 551

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL-----DPGNP 665
           +   +E+A +   S   E     W A++G    H +        K+ LEL     D G  
Sbjct: 552 KCGSIEDA-ELAFSSLPERGVVSWSAMIGGLAQHGH-------GKRALELFGRMVDEGIN 603

Query: 666 GNYVLISNVFAA 677
            N++ +++V  A
Sbjct: 604 PNHITMTSVLCA 615



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 228/443 (51%), Gaps = 5/443 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G V  A  +F+K+    V +WNA++   V NG   R +E   +M+  G+  + FT
Sbjct: 246 MYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFT 305

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++KAC+     D G +IHG ++K   DS D+I   LV MYAK +    AR++FD M 
Sbjct: 306 LSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMF 365

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D++L N++IS  S  G+  EAL LF E+++ GL  N  T  A L++       +   
Sbjct: 366 HR-DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTR 424

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  VK G     +V N LI  Y +C  +++A  V  +  + D ++  SM+T   Q D
Sbjct: 425 QVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCD 484

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++ F E+   G +PD     + ++A   L     GK++HA+ IK+ F+SD   GN
Sbjct: 485 HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 544

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+  YAKC  +      F  +  +  +SW+ +I G AQ+    +ALELF  +  EG++ 
Sbjct: 545 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINP 604

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV--ILNAIVDVYGKCGNIDYSRNV 418
           + + + SVL AC+    + + K     +      D      + ++D+ G+ G +D +  +
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL 664

Query: 419 FESIESKDVVS-WTSMI-SSYVH 439
             S+  +   S W +++ +S VH
Sbjct: 665 VNSMPFQANASIWGALLGASRVH 687



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 214/424 (50%), Gaps = 17/424 (4%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M+  G ++   T  AA QA         G  +HA+ +KSG        N LI+ Y++C +
Sbjct: 1   MRSAGTISQQLTRYAAAQAL------LPGAHLHASLLKSGS--LASFRNHLISFYSKCRR 52

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ--VCTVNAV 268
              A     ++ +   VSW+S++T +  N L   A+Q F  ++  G   ++  +  V   
Sbjct: 53  PCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC 112

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DF 327
               RL     G ++HA A+  GF SD+ + N L+ MY     ++   RVF +  ++ + 
Sbjct: 113 VPDARL-----GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNA 167

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW  +++ Y +N+    A+++F  +   G+         V+ AC+G + +   +++H  
Sbjct: 168 VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAM 227

Query: 388 IIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           ++R G   D+   NA+VD+Y K G +D +  +FE +   DVVSW ++IS  V NG  + A
Sbjct: 228 VVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 287

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           +EL   M  + +  +  TL S L A S       G++++GF+I+   + +  +   LVDM
Sbjct: 288 IELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           YA+   LD A KVF+ +  +DLIL  ++I+     GR   A+ LFY++  E    +  T 
Sbjct: 348 YAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTL 407

Query: 567 LALL 570
            A+L
Sbjct: 408 AAVL 411



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 156/350 (44%), Gaps = 42/350 (12%)

Query: 383 EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
            +H  +++ G S     N ++  Y KC     +R  F+ I     VSW+S++++Y +NGL
Sbjct: 25  HLHASLLKSG-SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGL 83

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
              A++ F+ M    V  +   L   L       +   G +++   +  GF  +  VA++
Sbjct: 84  PRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GAQVHAMAMATGFGSDVFVANA 140

Query: 503 LVDMYARCGALDIANKVFNCVQT-KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           LV MY   G +D A +VFN   + ++ + W  +++A   + +   AI +F +M      P
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 200

Query: 562 DHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
               F  ++ AC+ S  I  G++    ++R  Y  D +  +   LVD+  +   ++ A  
Sbjct: 201 TEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTAN--ALVDMYMKMGRVDIASV 258

Query: 621 FVRSMQIEPTAEV--WCALLGACRV--HSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
               M   P ++V  W AL+  C +  H ++ +  ++  K   L P          NVF 
Sbjct: 259 IFEKM---PDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP----------NVFT 305

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
            S               S LK   G+   ++G +IH F+   K++++SD+
Sbjct: 306 LS---------------SILKACSGAGAFDLGRQIHGFMI--KANADSDD 338


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 293/835 (35%), Positives = 488/835 (58%), Gaps = 5/835 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KC     A ++FD++      +W++++ AY +NG P   ++ +  MR  G+  + F  
Sbjct: 47  YSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFAL 106

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+K    + D   GA++H + +  G+ S  F+ N+LVAMY        AR++F+    
Sbjct: 107 PVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADS 163

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + + V WN ++SAY  + QC +A+ +F EM   G+    + F   + AC  S     G +
Sbjct: 164 ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ 223

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  V+ G +  V+ ANAL+ MY + G++  A+ +  ++ + D VSWN++++G V N  
Sbjct: 224 VHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGH 283

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++   +++ +G  P+     + + A    G    G+++H + IK    SD  IG  
Sbjct: 284 DHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVG 343

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAK   ++   +VF  M  +D I    +I+G +    H +AL LF  ++ EGL  +
Sbjct: 344 LVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVN 403

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFE 420
              + +VL + + L+  S T+++H   ++ G + D  ++N ++D Y KC  +  +  VFE
Sbjct: 404 RTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFE 463

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
              S D+++ TSMI++         A++LF  M    +E D   L S L+A +SLS  ++
Sbjct: 464 ECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++  +I++ F  +    ++LV  YA+CG+++ A   F+ +  + ++ W++MI     
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 583

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG GK A++LF +M  E   P+HIT  ++L AC+H+GL++E K++   M+  + +D   E
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE 643

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY+C++DLLGRA  L++A + V SM  +  A +W ALLGA RVH + ELG++ A+KL  L
Sbjct: 644 HYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFIL 703

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           +P   G +VL++N +A++  W +V +VR  M+ S +KK P  SWIE+ +K+H+FI  DKS
Sbjct: 704 EPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKS 763

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H  + EIY KL E+ + L  + G+V      LH+++  EK  +L  HSERLA+A+ +L +
Sbjct: 764 HPMTKEIYAKLVELGD-LMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLST 822

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             G+ IR+ KNLR+C DCH   K +S++  RE+++RD NRFHHF  G CSCGDYW
Sbjct: 823 PPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 183/612 (29%), Positives = 312/612 (50%), Gaps = 30/612 (4%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           GA +H  +LK G  S     N L++ Y+KC     AR++FD + +   V  W+S+++AYS
Sbjct: 23  GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVS-WSSLVTAYS 79

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +G    A+  F  M+  G+  N +     L+   D+    LG ++HA  + +G    V+
Sbjct: 80  NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVF 136

Query: 197 VANALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           VANAL+AMY   G M +A  V  + ++ +++VSWN +++ +V+ND    A+Q F E+  +
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196

Query: 256 GQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           G +P +    C VNA + S    N+  G+++HA  ++ G+  D+   N L+DMY K   V
Sbjct: 197 GIQPTEFGFSCVVNACTGS---RNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRV 253

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
           +    +F +M   D +SW  +I+G   N    +A+EL   ++  GL  +V  + S+L AC
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313

Query: 373 SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           SG       ++IHG++I+    SD  I   +VD+Y K   +D +R VF+ +  +D++   
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCN 373

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           ++IS   H G  +EAL LFY + +  +  +  TL + L + +SL      ++++   ++ 
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKI 433

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           GF  +  V + L+D Y +C  L  AN+VF    + D+I  TSMI A      G+ AI LF
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLF 493

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLG 610
            +M  +   PD     +LL AC+      +GK+    +++  +  D +  +   LV    
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN--ALVYTYA 551

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL-----DPGNP 665
           +   +E+A +   S   E     W A++G    H +        K+ LEL     D G  
Sbjct: 552 KCGSIEDA-ELAFSSLPERGVVSWSAMIGGLAQHGH-------GKRALELFGRMVDEGIN 603

Query: 666 GNYVLISNVFAA 677
            N++ +++V  A
Sbjct: 604 PNHITMTSVLCA 615



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 228/443 (51%), Gaps = 5/443 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G V  A  +F+K+    V +WNA++   V NG   R +E   +M+  G+  + FT
Sbjct: 246 MYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFT 305

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++KAC+     D G +IHG ++K   DS D+I   LV MYAK +    AR++FD M 
Sbjct: 306 LSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMF 365

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D++L N++IS  S  G+  EAL LF E+++ GL  N  T  A L++       +   
Sbjct: 366 HR-DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTR 424

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  VK G     +V N LI  Y +C  +++A  V  +  + D ++  SM+T   Q D
Sbjct: 425 QVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCD 484

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++ F E+   G +PD     + ++A   L     GK++HA+ IK+ F+SD   GN
Sbjct: 485 HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 544

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+  YAKC  +      F  +  +  +SW+ +I G AQ+    +ALELF  +  EG++ 
Sbjct: 545 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINP 604

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV--ILNAIVDVYGKCGNIDYSRNV 418
           + + + SVL AC+    + + K     +      D      + ++D+ G+ G +D +  +
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL 664

Query: 419 FESIESKDVVS-WTSMI-SSYVH 439
             S+  +   S W +++ +S VH
Sbjct: 665 VNSMPFQANASIWGALLGASRVH 687



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 215/424 (50%), Gaps = 17/424 (4%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M+  G ++   T  AA QA         G  +HA+ +KSG        N LI+ Y++C +
Sbjct: 1   MRSAGTISQQLTRYAAAQAL------LPGAHLHASLLKSGS--LASFRNHLISFYSKCRR 52

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ--VCTVNAV 268
              A  V  ++ +   VSW+S++T +  N L   A+Q F  ++  G   ++  +  V   
Sbjct: 53  PCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC 112

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DF 327
               RL     G ++HA A+  GF SD+ + N L+ MY     ++   RVF +  ++ + 
Sbjct: 113 VPDARL-----GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNA 167

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW  +++ Y +N+    A+++F  +   G+         V+ AC+G + +   +++H  
Sbjct: 168 VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAM 227

Query: 388 IIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           ++R G   D+   NA+VD+Y K G +D +  +FE +   DVVSW ++IS  V NG  + A
Sbjct: 228 VVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 287

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           +EL   M  + +  +  TL S L A S       G++++GF+I+   + +  +   LVDM
Sbjct: 288 IELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           YA+   LD A KVF+ +  +DLIL  ++I+     GR   A+ LFY++  E    +  T 
Sbjct: 348 YAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTL 407

Query: 567 LALL 570
            A+L
Sbjct: 408 AAVL 411



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 157/350 (44%), Gaps = 42/350 (12%)

Query: 383 EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
            +H  +++ G S     N ++  Y KC     +R VF+ I     VSW+S++++Y +NGL
Sbjct: 25  HLHASLLKSG-SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
              A++ F+ M    V  +   L   L       +   G +++   +  GF  +  VA++
Sbjct: 84  PRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GAQVHAMAMATGFGSDVFVANA 140

Query: 503 LVDMYARCGALDIANKVFNCVQT-KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           LV MY   G +D A +VFN   + ++ + W  +++A   + +   AI +F +M      P
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 200

Query: 562 DHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
               F  ++ AC+ S  I  G++    ++R  Y  D +  +   LVD+  +   ++ A  
Sbjct: 201 TEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTAN--ALVDMYMKMGRVDIASV 258

Query: 621 FVRSMQIEPTAEV--WCALLGACRV--HSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
               M   P ++V  W AL+  C +  H ++ +  ++  K   L P          NVF 
Sbjct: 259 IFEKM---PDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP----------NVFT 305

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
            S               S LK   G+   ++G +IH F+   K++++SD+
Sbjct: 306 LS---------------SILKACSGAGAFDLGRQIHGFMI--KANADSDD 338


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 285/706 (40%), Positives = 434/706 (61%), Gaps = 2/706 (0%)

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           ++  ++  G  +   G FRE+ R G   + YT    ++AC D     +G  IH    K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +L  +V  AL+ MY +C ++ +A  +  +++ +D V+W  M+ G+ +     +++  F 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           +++  G  PD+V  V  V A  +LG +   + +  Y  ++ F  D+ +G  ++DMYAKC 
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
           CV     +F +M  ++ ISW+ +IA Y  +    KAL+LFR +   G+  D + + S+L 
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           ACS LK +   + IH  + + GL  D  +  A+VD+YGKC  I+ +R +F+ +  +D+V+
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           WT MI  Y   G ANE+L LF  M E  V  D + +V+ + A + L  + K + ++ +I 
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 360

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           RK F L+  + ++++DM+A+CG ++ A ++F+ ++ K++I W++MI A G HG+G+ A+D
Sbjct: 361 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 420

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLL 609
           LF  M      P+ IT ++LLYACSH+GL+ EG +F  +M  DY +    +HY C+VDLL
Sbjct: 421 LFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLL 480

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV 669
           GRA  L+EA + + SM +E    +W A LGACR H +  L E  A  LLEL P NPG+Y+
Sbjct: 481 GRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYI 540

Query: 670 LISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYK 729
           L+SN++A + +W+DV + R  M    LKK PG +WIE+ NK H F   D +H  S EIY+
Sbjct: 541 LLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYE 600

Query: 730 KLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRIT 789
            L  +  KLE   GYV  T FVLH+V+EE K+ +LY HSE+LAIA+G++ + E + IRI 
Sbjct: 601 MLKSLGNKLELV-GYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRII 659

Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           KNLRVC DCH+FCKLVS + GR ++VRDANRFHHF+ G CSCGDYW
Sbjct: 660 KNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 170/552 (30%), Positives = 289/552 (52%), Gaps = 13/552 (2%)

Query: 29  MLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
           M+G +   G+ +    T+  +   G   D +T P VI+AC  LK+L  G  IH +V K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
            D   F+  +LV MY KC +   AR LFD+M E+ D+V W  +I  Y+  G+  E+L LF
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQER-DLVTWTVMIGGYAECGKANESLVLF 119

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            +M+  G+V +    V  + AC           I     +    L V +  A+I MYA+C
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G +  A  +  ++E K+ +SW++M+  +  +    KA+  FR +  +G  PD++   + +
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            A   L NL  G+ +H    K G   D  +   L+DMY KC  +     +F +M  +D +
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           +WT +I GYA+     ++L LF  ++ EG+  D + + +V+ AC+ L  M + + I  YI
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 359

Query: 389 IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
            RK    D+++  A++D++ KCG ++ +R +F+ +E K+V+SW++MI++Y ++G   +AL
Sbjct: 360 QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 419

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVD 505
           +LF +M  + +  + ITLVS L A S   ++++G      ++ + +++   V   + +VD
Sbjct: 420 DLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFS-LMWEDYSVRADVKHYTCVVD 478

Query: 506 MYARCGALDIANKVFNCVQT-KDLILWTSMINANGLHGR----GKVAIDLFYKMEAESFA 560
           +  R G LD A K+   +   KD  LW + + A   H       K A  L   +E +   
Sbjct: 479 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSL---LELQPQN 535

Query: 561 PDHITFLALLYA 572
           P H   L+ +YA
Sbjct: 536 PGHYILLSNIYA 547



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 228/444 (51%), Gaps = 14/444 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  + DA  LFDK+ +R + TW  M+G Y   G+    L  + +MR  G+  D   
Sbjct: 74  MYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVA 133

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA L  +     I   + +  +     +  +++ MYAKC     AR++FDRM 
Sbjct: 134 MVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME 193

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK +V+ W+++I+AY   GQ  +AL LFR M   G++ +  T  + L AC D     +G 
Sbjct: 194 EK-NVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGR 252

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH    K G +L  +V  AL+ MY +C ++ +A  +  ++  +D V+W  M+ G+ +  
Sbjct: 253 LIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECG 312

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +++  F +++  G  PD+V  V  V A  +LG +   + +  Y  ++ F  D+ +G 
Sbjct: 313 NANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGT 372

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++DM+AKC CV     +F +M  ++ ISW+ +IA Y  +    KAL+LF  +   G+  
Sbjct: 373 AMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILP 432

Query: 361 DVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           + + + S+L ACS       GL+  S   E   Y +R   +D+     +VD+ G+ G +D
Sbjct: 433 NKITLVSLLYACSHAGLVEEGLRFFSLMWE--DYSVR---ADVKHYTCVVDLLGRAGRLD 487

Query: 414 YSRNVFESIE-SKDVVSWTSMISS 436
            +  + ES+   KD   W + + +
Sbjct: 488 EALKLIESMTVEKDEGLWGAFLGA 511


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 281/706 (39%), Positives = 444/706 (62%), Gaps = 3/706 (0%)

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           +S    +G+  EALG+   M   G    +  F   LQ C        G E+HAA +KSG 
Sbjct: 19  VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
               Y+ N L++MYA+CG +T+A  V   + +++ VSW +M+  FV  +   +A + +  
Sbjct: 79  QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           ++ AG KPD+V  V+ ++A      L  G+++H   ++ G   + ++G +L+ MYAKC  
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGD 198

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           ++    +F ++  ++ ++WT +IAGYAQ      ALEL  T+Q   +  + +   S+L  
Sbjct: 199 ISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQG 258

Query: 372 CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           C+    +   K++H YII+ G   +L ++N+++ +Y KCG ++ +R +F  +  +DVV+W
Sbjct: 259 CTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTW 318

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
           T+M++ Y   G  +EA+ LF  M +  ++ D +T  S L++ SS + L++GK ++  ++ 
Sbjct: 319 TAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVH 378

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN-GLHGRGKVAID 549
            G+NL+  + S+LV MYA+CG++D A+ VFN +  ++++ WT++I      HGR + A++
Sbjct: 379 AGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALE 438

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLL 609
            F +M+ +   PD +TF ++L AC+H GL+ EG+K    M  DY + P  EHY+C VDLL
Sbjct: 439 YFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLL 498

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV 669
           GRA HLEEA   + SM   P   VW ALL ACRVHS+ E GE  A+ +L+LDP + G YV
Sbjct: 499 GRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYV 558

Query: 670 LISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYK 729
            +S+++AA+ +++D E+VR  M    + K PG SWIE+  K+H F   DKSH ES++IY 
Sbjct: 559 ALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYV 618

Query: 730 KLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRIT 789
           +L ++TE++ +E GYV  T+FVLH+V+EE+K ++L+ HSERLAI YG++K+  G  IRI 
Sbjct: 619 ELGKLTEQI-KEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIV 677

Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           KNLRVC DCH+  K +S++ GRE++ RDA RFHHF  GVCSCGD+W
Sbjct: 678 KNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 158/559 (28%), Positives = 296/559 (52%), Gaps = 15/559 (2%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN 97
           E L ++ T   M + G  V +  F  +++ CA L+ L+ G ++H  +LK G     ++ N
Sbjct: 30  EALGIMNT---MILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLEN 86

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
           +L++MYAKC     AR++FD + ++ ++V W ++I A+ A  + LEA   +  M+  G  
Sbjct: 87  TLLSMYAKCGSLTDARRVFDSIRDR-NIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCK 145

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            +  TFV+ L A  +     LG ++H   V++G  L+  V  +L+ MYA+CG +++A  +
Sbjct: 146 PDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVI 205

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             +L  K+ V+W  ++ G+ Q      A++    +Q A   P+++   + +        L
Sbjct: 206 FDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAAL 265

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
            +GK++H Y I+ G+  +L + N+L+ MY KC  +    ++F  +  +D ++WT ++ GY
Sbjct: 266 EHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGY 325

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
           AQ   H +A+ LFR +Q +G+  D M   SVL +CS    + + K IH  ++  G + D+
Sbjct: 326 AQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDV 385

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS-YVHNGLANEALELFYLMNE 455
            + +A+V +Y KCG++D +  VF  +  ++VV+WT++I+     +G   EALE F  M +
Sbjct: 386 YLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKK 445

Query: 456 ANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
             ++ D +T  S LSA + + ++++G K      +  G        S  VD+  R G L+
Sbjct: 446 QGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLE 505

Query: 515 IA-NKVFNCVQTKDLILWTSMINANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALL 570
            A N + +        +W ++++A  +H    RG+ A +   K++ +    D   ++AL 
Sbjct: 506 EAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPD----DDGAYVALS 561

Query: 571 YACSHSGLINEGKKFLEIM 589
              + +G   + +K  ++M
Sbjct: 562 SIYAAAGRYEDAEKVRQVM 580



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 240/440 (54%), Gaps = 5/440 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA ++FD +  R + +W AM+ A+V+  + L   + Y  M++ G   D  T
Sbjct: 91  MYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVT 150

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ A    + L  G K+H  +++ G +    +  SLV MYAKC D  KAR +FDR+ 
Sbjct: 151 FVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLP 210

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK +VV W  +I+ Y+  GQ   AL L   MQ+  +  N  TF + LQ C   +    G 
Sbjct: 211 EK-NVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGK 269

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   ++SG   +++V N+LI MY +CG + EA  +   L ++D V+W +M+TG+ Q  
Sbjct: 270 KVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLG 329

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +A+  FR +Q  G KPD++   + +++      L  GK +H   +  G+  D+ + +
Sbjct: 330 FHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQS 389

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG-YAQNNCHLKALELFRTVQLEGLD 359
            L+ MYAKC  ++    VF QM+ ++ ++WT II G  AQ+    +ALE F  ++ +G+ 
Sbjct: 390 ALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIK 449

Query: 360 ADVMIIGSVLMACSGLKCMSQ-TKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRN 417
            D +   SVL AC+ +  + +  K      +  G+  +V   +  VD+ G+ G+++ + N
Sbjct: 450 PDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAEN 509

Query: 418 VFESIESKDVVS-WTSMISS 436
           V  S+      S W +++S+
Sbjct: 510 VILSMPFIPGPSVWGALLSA 529


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 284/773 (36%), Positives = 467/773 (60%), Gaps = 7/773 (0%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++ C  +K+L    +I  LV+K G  +       LV++++K     +A ++F+ + +K 
Sbjct: 55  LLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D  L+++++  Y+ +     AL     M+   +    Y F   L+ C D++    G EIH
Sbjct: 112 DA-LYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIH 170

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              + +     V+    ++ MYA+C ++ +A  +  ++  +D VSWN+++ GF QN    
Sbjct: 171 GQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAK 230

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           KA++    +Q  GQ+PD +  V  + A+  +G L+ GK +H YAI+ GF   + I   L 
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMY+KC  V     +F  M  +  +SW +++ GY QN    KA+ +F  +  EG+D   +
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            I   L AC+ L  + + K +H ++ +  L SD+ ++N+++ +Y KC  +D + ++F ++
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             +  VSW +MI  Y  NG  +EAL  F  M    ++ DS T+VS + A + LS+ +  K
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
            ++G IIR   +    V ++LVDMY++CGA+ +A K+F+ +  + +I W +MI+  G HG
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
            G+ A+DLF KM+  +  P+ IT+L+++ ACSHSGL++EG +  + M+ DY L+P  +HY
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHY 590

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
             +VDLLGRA  ++EA+ F+ +M I P   V+ A+LGAC++H N E+GE  AKKL EL+P
Sbjct: 591 GAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNP 650

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
              G +VL++N++A++ KW  V +VR  M   GLKKTPG S +E+ N++HSF +   +H 
Sbjct: 651 DEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHP 710

Query: 723 ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE 782
           +S  IY  L E+  ++ +  GYV  T  +L +VE++ + Q+L  HSE+LAIA+G+L ++ 
Sbjct: 711 QSKRIYAFLEELVYEI-KAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSP 768

Query: 783 GSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G+ I + KNLRVC DCH+  K +S + GRE++VRD  RFHHF+ G+CSCGDYW
Sbjct: 769 GTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  283 bits (723), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 172/546 (31%), Positives = 285/546 (52%), Gaps = 8/546 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++ K GS+ +A ++F+ +  +    ++ ML  Y  N      L    RMR   +    + 
Sbjct: 90  LFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYN 149

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++K C    DL  G +IHG ++   + +  F +  +V MYAKC     A ++FDRM 
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP 209

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D+V WN+II+ +S +G   +AL L   MQ  G   ++ T V  L A  D     +G 
Sbjct: 210 ER-DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGK 268

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +++G    V ++ AL  MY++CG +  A  +   ++ K  VSWNSM+ G+VQN 
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA+  F ++   G  P  V  + A+ A   LG+L  GK +H +  +    SD+ + N
Sbjct: 329 EPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMN 388

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MY+KC  V+    +F  +  +  +SW  +I GYAQN    +AL  F  ++  G+  
Sbjct: 389 SLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKP 448

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D   + SV+ A + L      K IHG IIR  L  ++ +  A+VD+Y KCG I  +R +F
Sbjct: 449 DSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLF 508

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + I  + V++W +MI  Y  +GL   AL+LF  M +  VE + IT +S +SA S   ++ 
Sbjct: 509 DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVD 568

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMI 535
           +G  L  F  +++ + LE S+    ++VD+  R G +  A + + N   +  + ++ +M+
Sbjct: 569 EG--LRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAML 626

Query: 536 NANGLH 541
            A  +H
Sbjct: 627 GACKIH 632



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 182/355 (51%), Gaps = 9/355 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV  A  +FD + Q+TV +WN+M+  YV NGEP + +  + +M   GI     T
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + ACA L DL+ G  +H  V +    S   ++NSL++MY+KC     A  +F+ + 
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  V  WN++I  Y+ +G+  EAL  F EM+ +G+  +++T V+ + A  + S      
Sbjct: 412 GRTHVS-WNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   ++S  +  ++V  AL+ MY++CG +  A  +   + ++  ++WN+M+ G+  + 
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L   A+  F +++    +P+ +  ++ +SA    G L++    H  ++KQ +  +     
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSG-LVDEGLRHFKSMKQDYGLEPS--- 586

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             MD Y     V+ +GR      A DFI    I  G       L A ++ + +++
Sbjct: 587 --MDHYG--AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEV 637


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 294/836 (35%), Positives = 489/836 (58%), Gaps = 5/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            Y KC     A ++FD++      +W++++ AY +N  P   L  +  MR   +  + F 
Sbjct: 46  FYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFV 105

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            P V+K CA   D   G ++H L +  G     F+ N+LVAMY       +AR +FD  G
Sbjct: 106 LPVVLK-CA--PDAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAG 162

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + + V WN ++SAY  + +C  A+ +F EM   G+  N + F   + AC  S     G 
Sbjct: 163 CERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGR 222

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +++G +  V+ ANAL+ MY++ G +  AA V  ++   D VSWN+ ++G V + 
Sbjct: 223 KVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHG 282

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++   +++ +G  P+     + + A    G    G+++H + +K    SD  I  
Sbjct: 283 HDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAF 342

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAK   ++   +VF  +  +D + W  +I+G +    H +AL LF  ++ EG D 
Sbjct: 343 GLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDV 402

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           +   + +VL + + L+ +S T+++H    + G LSD  ++N ++D Y KC  ++Y+  VF
Sbjct: 403 NRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVF 462

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E   S D++++TSMI++        +A++LF  M    ++ D   L S L+A +SLS  +
Sbjct: 463 EKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYE 522

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GK+++  +I++ F  +    ++LV  YA+CG+++ A+  F+ +  K ++ W++MI    
Sbjct: 523 QGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLA 582

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG GK A+D+F++M  E  +P+HIT  ++L AC+H+GL++E K++   M+  + ++   
Sbjct: 583 QHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTE 642

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC++DLLGRA  L++A + V SM  +  A VW ALL A RVH + ELG + A+KL  
Sbjct: 643 EHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFI 702

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P   G +VL++N +A++  W DV +VR  M+ S +KK P  SW+E+ +K+H+FI  DK
Sbjct: 703 LEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDK 762

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH  + +IY KL E+ + L  + GYV   +  LH+V++ EK  +L  HSERLA+A+ ++ 
Sbjct: 763 SHPRARDIYAKLDELGD-LMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALIS 821

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +  G+ IR+ KNLR+C DCH+  K +S +  RE+++RD NRFHHF  G CSC DYW
Sbjct: 822 TPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 177/607 (29%), Positives = 308/607 (50%), Gaps = 20/607 (3%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           GA IH  +LK G  +     N L++ Y+KC     AR++FD + +   V  W+S+++AYS
Sbjct: 23  GAHIHAHLLKSGLFAV--FRNHLLSFYSKCRLPGSARRVFDEIPDPCHVS-WSSLVTAYS 79

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +    +ALG FR M+   +  N +     L+   D+ F   G ++HA  + +G    ++
Sbjct: 80  NNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF---GTQLHALAMATGLGGDIF 136

Query: 197 VANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           VANAL+AMY   G + EA  V  +    +++VSWN +++ +V+ND    A++ F E+   
Sbjct: 137 VANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWG 196

Query: 256 GQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           G +P++    C VNA + S    +L  G+++HA  I+ G+  D+   N L+DMY+K   +
Sbjct: 197 GVQPNEFGFSCVVNACTGS---RDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDI 253

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
                VF ++   D +SW   I+G   +     ALEL   ++  GL  +V  + S+L AC
Sbjct: 254 RMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKAC 313

Query: 373 SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           +G    +  ++IHG++++    SD  I   +VD+Y K G +D ++ VF+ I  +D+V W 
Sbjct: 314 AGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWN 373

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           ++IS   H     EAL LF  M +   + +  TL + L + +SL  +   ++++    + 
Sbjct: 374 ALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKL 433

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           GF  +  V + L+D Y +C  L+ A +VF    + D+I +TSMI A      G+ AI LF
Sbjct: 434 GFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLF 493

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLG 610
            +M  +   PD     +LL AC+      +GK+    +++  +  D +  +   LV    
Sbjct: 494 MEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGN--ALVYTYA 551

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVL 670
           +   +E+A     S   E     W A++G    H + +    V  ++  +D     N++ 
Sbjct: 552 KCGSIEDA-DLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRM--VDEHISPNHIT 608

Query: 671 ISNVFAA 677
           +++V  A
Sbjct: 609 MTSVLCA 615



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 190/373 (50%), Gaps = 19/373 (5%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +LL G  +HA+ +K G  +  +  N L+  Y+KC       RVF ++     +SW++++ 
Sbjct: 19  SLLQGAHIHAHLLKSGLFAVFR--NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVT 76

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT---KEIHGYIIRKG 392
            Y+ N     AL  FR+++   +  +  ++  V      LKC        ++H   +  G
Sbjct: 77  AYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVV------LKCAPDAGFGTQLHALAMATG 130

Query: 393 L-SDLVILNAIVDVYGKCGNIDYSRNVF-ESIESKDVVSWTSMISSYVHNGLANEALELF 450
           L  D+ + NA+V +YG  G +D +R VF E+   ++ VSW  ++S+YV N   + A+++F
Sbjct: 131 LGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVF 190

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
             M    V+ +       ++A +    L+ G++++  +IR G++ +   A++LVDMY++ 
Sbjct: 191 GEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKL 250

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G + +A  VF  V   D++ W + I+   LHG  + A++L  +M++    P+  T  ++L
Sbjct: 251 GDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSIL 310

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC--LVDLLGRANHLEEAYQFVRSMQIE 628
            AC+ SG  N G++    M    + +   ++Y    LVD+  +   L++A + V     +
Sbjct: 311 KACAGSGAFNLGRQIHGFM---VKANADSDNYIAFGLVDMYAKHGLLDDAKK-VFDWIPQ 366

Query: 629 PTAEVWCALLGAC 641
               +W AL+  C
Sbjct: 367 RDLVLWNALISGC 379



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 107/467 (22%), Positives = 197/467 (42%), Gaps = 63/467 (13%)

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIES 424
           IG +L   +  + + Q   IH ++++ GL   V  N ++  Y KC     +R VF+ I  
Sbjct: 7   IGPLLTRYAATQSLLQGAHIHAHLLKSGLF-AVFRNHLLSFYSKCRLPGSARRVFDEIPD 65

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
              VSW+S++++Y +N +  +AL  F  M   +V  +   L   L  A        G +L
Sbjct: 66  PCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF---GTQL 122

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR 543
           +   +  G   +  VA++LV MY   G +D A  VF+     ++ + W  +++A   + R
Sbjct: 123 HALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDR 182

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHY 602
              A+ +F +M      P+   F  ++ AC+ S  +  G+K    ++R  Y  D +  + 
Sbjct: 183 CSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTAN- 241

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
             LVD+  +   +  A   V     E     W A +  C +H + +      + LL++  
Sbjct: 242 -ALVDMYSKLGDIRMA-AVVFGKVPETDVVSWNAFISGCVLHGHDQHA---LELLLQMKS 296

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
                  L+ NVF  S               S LK   GS    +G +IH F+   K+++
Sbjct: 297 SG-----LVPNVFTLS---------------SILKACAGSGAFNLGRQIHGFMV--KANA 334

Query: 723 ESD--------EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG------HS 768
           +SD        ++Y K   + +  ++   ++ Q   VL N        ++ G      H+
Sbjct: 335 DSDNYIAFGLVDMYAKHG-LLDDAKKVFDWIPQRDLVLWNA-------LISGCSHGAQHA 386

Query: 769 ERLAI-------AYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
           E L++        + V ++T  ++++ T +L    D      L  +L
Sbjct: 387 EALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKL 433


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 292/781 (37%), Positives = 460/781 (58%), Gaps = 3/781 (0%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D+ T+  + + C ML+D   G ++   +++ G     + +N+L+ +++ C +  +ARQ 
Sbjct: 59  IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD + E + VV WN+II+ Y+  G   EA  LFR+M    +  +  TF+  L AC   + 
Sbjct: 119 FDSV-ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAG 177

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             LG E HA  +K G      +  AL++MY + G M  A  V   L  +D  ++N M+ G
Sbjct: 178 LKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGG 237

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           + ++    KA Q F  +Q  G KP+++  ++ +        L  GK +HA  +  G V D
Sbjct: 238 YAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDD 297

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           +++   L+ MY  C  +    RVF +M  +D +SWT +I GYA+N+    A  LF T+Q 
Sbjct: 298 VRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQE 357

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
           EG+  D +    ++ AC+    +S  +EIH  ++R G  +DL++  A+V +Y KCG I  
Sbjct: 358 EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKD 417

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R VF+++  +DVVSW++MI +YV NG   EA E F+LM   NVE D +T ++ L+A   
Sbjct: 418 ARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGH 477

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L  L  G E+    I+        V ++L++M  + G+++ A  +F  +  +D++ W  M
Sbjct: 478 LGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVM 537

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I    LHG  + A+DLF +M  E F P+ +TF+ +L ACS +G + EG++F   +     
Sbjct: 538 IGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRG 597

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  E Y C+VDLLGRA  L+EA   +  M ++P + +W  LL ACR++ N ++ E  A
Sbjct: 598 IVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAA 657

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           ++ L  +P +   YV +S+++AA+  W++V +VR  M   G++K  G +WIE+  K+H+F
Sbjct: 658 ERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTF 717

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           +  D+SH ++ EIY +LA +   ++RE GY+  TQ VLHNV E+EK + +  HSE+LAIA
Sbjct: 718 VVEDRSHPQAGEIYAELARLMTAIKRE-GYIPVTQNVLHNVGEQEKEEAISYHSEKLAIA 776

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           YGVL    G+ IRI KNLRVC DCHS  K +S++ GRE++ RDA+RFHHF+ GVCSCGDY
Sbjct: 777 YGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDY 836

Query: 835 W 835
           W
Sbjct: 837 W 837



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 171/550 (31%), Positives = 286/550 (52%), Gaps = 4/550 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++  CG++L+A Q FD V  +TV TWNA++  Y   G        + +M    +     T
Sbjct: 105 LHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIIT 164

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC+    L  G + H  V+K G+ S   I  +LV+MY K      ARQ+FD + 
Sbjct: 165 FLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGL- 223

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K DV  +N +I  Y+ SG   +A  LF  MQ+ G   N  +F++ L  C        G 
Sbjct: 224 YKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGK 283

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  + +G    V VA ALI MY  CG +  A  V  +++ +D VSW  M+ G+ +N 
Sbjct: 284 AVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENS 343

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A   F  +Q  G +PD++  ++ ++A     +L   +E+H+  ++ GF +DL +  
Sbjct: 344 NIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDT 403

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYAKC  +    +VF  M+ +D +SW+ +I  Y +N C  +A E F  ++   ++ 
Sbjct: 404 ALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEP 463

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           DV+   ++L AC  L  +    EI+   I+  L S + + NA++++  K G+I+ +R +F
Sbjct: 464 DVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIF 523

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E++  +DVV+W  MI  Y  +G A EAL+LF  M +     +S+T V  LSA S    ++
Sbjct: 524 ENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVE 583

Query: 480 KGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           +G+    +++  +G      +   +VD+  R G LD A  + N +  K +  +W++++ A
Sbjct: 584 EGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAA 643

Query: 538 NGLHGRGKVA 547
             ++G   VA
Sbjct: 644 CRIYGNLDVA 653



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 185/380 (48%), Gaps = 8/380 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CGS+  A ++FDK+  R V +W  M+  Y  N         ++ M+  GI  D  T
Sbjct: 307 MYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRIT 366

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +I ACA   DL    +IH  V++ G+ +   +  +LV MYAKC   + ARQ+FD M 
Sbjct: 367 YIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAM- 425

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV W+++I AY  +G   EA   F  M+R  +  +  T++  L AC       LGM
Sbjct: 426 SRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGM 485

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EI+   +K+     + V NALI M  + G +  A  +   +  +D V+WN M+ G+  + 
Sbjct: 486 EIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHG 545

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK-QGFVSDLQIG 299
              +A+  F  +     +P+ V  V  +SA  R G +  G+   +Y +  +G V  +++ 
Sbjct: 546 NAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELY 605

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAG---YAQNNCHLKALELFRTVQL 355
             ++D+  +   ++    +  +M  +   S W+T++A    Y   +   +A E  R +  
Sbjct: 606 GCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAE--RCLMS 663

Query: 356 EGLDADVMIIGSVLMACSGL 375
           E  D  V +  S + A +G+
Sbjct: 664 EPYDGAVYVQLSHMYAAAGM 683



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 68/140 (48%)

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A ++ + + E +   DS T V        L     GK++   II+ G  L     ++L+ 
Sbjct: 45  ANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIK 104

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           +++ CG +  A + F+ V+ K ++ W ++I      G  K A  LF +M  E+  P  IT
Sbjct: 105 LHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIIT 164

Query: 566 FLALLYACSHSGLINEGKKF 585
           FL +L ACS    +  GK+F
Sbjct: 165 FLIVLDACSSPAGLKLGKEF 184


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 295/839 (35%), Positives = 489/839 (58%), Gaps = 9/839 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G V  A ++F+++S R   +W A+L  Y  NG     +  Y  M   G+    + 
Sbjct: 86  LYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYV 145

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ AC   +    G  IH  V K G+ S  F+ N+L+++Y +C  FR A ++F  M 
Sbjct: 146 LSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDM- 204

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V +N++IS ++  G    ALG+F EMQ  GL  ++ T  + L AC        G 
Sbjct: 205 LYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGK 264

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  +K+G +L   +  +L+ +Y + G + EA  +    +  + V WN ML  + Q D
Sbjct: 265 QLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQID 324

Query: 241 LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
              K+   F  +  AG +P++    C +   + +G +G    G+++H+  IK GF SD+ 
Sbjct: 325 DLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGL---GEQIHSLTIKNGFQSDMY 381

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +   L+DMY+K   ++   R+   +  +D +SWT++IAGY Q+    +ALE F+ +Q  G
Sbjct: 382 VSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACG 441

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           +  D + + S + AC+G+K + Q  +IH  +   G S D+ I N +V +Y +CG    + 
Sbjct: 442 IWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAF 501

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           + FE+IE K+ ++W  +IS +  +GL  EAL++F  M++A  + +  T VS++SA+++L+
Sbjct: 502 SSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLA 561

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            +K+GK+++  +I+ G+  E  ++++L+ +Y +CG+++ A   F  +  ++ + W ++I 
Sbjct: 562 DIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIIT 621

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
               HGRG  A+DLF +M+ +   P  +TF+ +L ACSH GL+ EG  + + M  ++ + 
Sbjct: 622 CCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIH 681

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P P+HYAC+VD+LGRA  L+ A +FV  M I   + VW  LL AC+VH N E+GE  AK 
Sbjct: 682 PRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKH 741

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           LLEL+P +  +YVL+SN +A + KW   +Q+R  M+  G++K PG SWIE+ N +H+F  
Sbjct: 742 LLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFV 801

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D+ H  +D+IY  L+ + ++L +  GY  +   + H  E+E K    + HSE+LA+A+G
Sbjct: 802 GDRLHPLADQIYNFLSHLNDRLYKI-GYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFG 860

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++       +R+ KNLRVC DCH++ K  S + GRE+V+RD  RFHHF  G CSCGDYW
Sbjct: 861 LMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 168/604 (27%), Positives = 308/604 (50%), Gaps = 6/604 (0%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKAC-AMLKDLDC 76
           ++ R   ++N  L  +++  +P ++L  ++      + + A  F C ++AC    +    
Sbjct: 1   MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
             +IH   + CG      I N L+ +YAK    R+AR++F+ +  +++V  W +++S Y+
Sbjct: 61  VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVS-WVAVLSGYA 119

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +G   EA+ L+REM R G+V   Y   + L AC  +    LG  IH    K G   + +
Sbjct: 120 QNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETF 179

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V NALI++Y RC     A  V   +   DSV++N++++G  Q     +A+  F E+Q +G
Sbjct: 180 VGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSG 239

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             PD V   + ++A   +G+L  GK+LH+Y +K G   D  +  +L+D+Y K   +    
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           ++F      + + W  ++  Y Q +   K+ ++F  +   G+  +      +L  C+   
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG 359

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +   ++IH   I+ G  SD+ +   ++D+Y K G +D ++ + + IE KDVVSWTSMI+
Sbjct: 360 EIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIA 419

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            YV +    EALE F  M    +  D+I L SA+SA + +  + +G +++  +   G++ 
Sbjct: 420 GYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSA 479

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           + S+ + LV +YARCG    A   F  ++ K+ I W  +I+     G  + A+ +F KM+
Sbjct: 480 DVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMD 539

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANH 614
                 +  TF++ + A ++   I +GK+    +++  Y  +   E    L+ L G+   
Sbjct: 540 QAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSE--TEISNALISLYGKCGS 597

Query: 615 LEEA 618
           +E+A
Sbjct: 598 IEDA 601


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/839 (35%), Positives = 493/839 (58%), Gaps = 9/839 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            Y KC     A ++FD+       +W++++ AY +N  P   L  +  MR  G+  + F 
Sbjct: 46  FYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFA 105

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            P V+K CA   D   G ++H + +  G     F+ N+LVAMY       +AR++FD   
Sbjct: 106 LPIVLK-CA--PDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAA 162

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              + V WN ++SA+  + +C +A+ LF EM   G+  N + F   + AC  S     G 
Sbjct: 163 RDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGR 222

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  V++G +  V+ ANAL+ MY++ G +  AA V  ++   D VSWN+ ++G V + 
Sbjct: 223 KVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHG 282

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAV---SASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
               A++   +++ +G  P+ V T++++    A    G    G+++H + IK    SD  
Sbjct: 283 HDQHALELLLQMKSSGLVPN-VFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDY 341

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           IG  L+DMYAK   ++   +VF  +  +D + W  +I+G +   CH ++L LF  ++ EG
Sbjct: 342 IGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEG 401

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSR 416
            D +   + +VL + + L+ +S T ++H    + G LSD  ++N ++D Y KC  + Y+ 
Sbjct: 402 SDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYAN 461

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VFE   S +++++TSMI++        +A++LF  M    +E D   L S L+A +SLS
Sbjct: 462 KVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 521

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
             ++GK+++  +I++ F  +    ++LV  YA+CG+++ A+  F+ +  K ++ W++MI 
Sbjct: 522 AYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIG 581

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
               HG GK A+D+F +M  E  AP+HIT  ++L AC+H+GL++E K +   M+  + +D
Sbjct: 582 GLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGID 641

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
              EHY+C++DLLGRA  L++A + V SM  E  A VW ALL A RVH + ELG++ A+K
Sbjct: 642 RTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEK 701

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L  L+P   G +VL++N +A++  W +V +VR  M+ S +KK P  SW+E+ +++H+FI 
Sbjct: 702 LFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIV 761

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            DKSH  + +IY KL E+ + L  + GYV   +  LH+V++ EK  +L  HSERLA+A+ 
Sbjct: 762 GDKSHPRARDIYAKLEELGD-LMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFA 820

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ +  G+ IR+ KNLR+C DCH   K +S++  RE+++RD NRFHHF  G CSCGDYW
Sbjct: 821 LISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 185/617 (29%), Positives = 315/617 (51%), Gaps = 22/617 (3%)

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW 128
           A  + L  GA IH  +LK G        N L++ Y+KC     AR++FD   +   V  W
Sbjct: 15  AATQSLFLGAHIHAHLLKSGL--LHAFRNHLLSFYSKCRLPGSARRVFDETPDPCHVS-W 71

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           +S+++AYS +    EAL  FR M+  G+  N +     L+   D+    LG+++HA  V 
Sbjct: 72  SSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG---LGVQVHAVAVS 128

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQ-LENKDSVSWNSMLTGFVQNDLYCKAMQ 247
           +G +  ++VANAL+AMY   G + EA  V  +   ++++VSWN M++ FV+ND    A++
Sbjct: 129 TGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVE 188

Query: 248 FFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
            F E+  +G +P++    C VNA + S    +L  G+++HA  ++ G+  D+   N L+D
Sbjct: 189 LFGEMVWSGVRPNEFGFSCVVNACTGS---RDLEAGRKVHAMVVRTGYDKDVFTANALVD 245

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           MY+K   ++    VF ++   D +SW   I+G   +     ALEL   ++  GL  +V  
Sbjct: 246 MYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFT 305

Query: 365 IGSVL--MACSGLKCMSQTKEIHGYIIRK-GLSDLVILNAIVDVYGKCGNIDYSRNVFES 421
           + S+L   A +G    +  ++IHG++I+    SD  I  A+VD+Y K G +D +R VFE 
Sbjct: 306 LSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEW 365

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           I  KD++ W ++IS   H G   E+L LF  M +   + +  TL + L + +SL  +   
Sbjct: 366 IPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDT 425

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
            +++    + GF  +  V + L+D Y +C  L  ANKVF    + ++I +TSMI A    
Sbjct: 426 TQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQC 485

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPE 600
             G+ AI LF +M  +   PD     +LL AC+      +GK+    +++  +  D +  
Sbjct: 486 DHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAG 545

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           +   LV    +   +E+A     S   +     W A++G    H + +    V +++  +
Sbjct: 546 N--ALVYTYAKCGSIEDA-DLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRM--V 600

Query: 661 DPGNPGNYVLISNVFAA 677
           D     N++ +++V  A
Sbjct: 601 DERIAPNHITLTSVLCA 617


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 296/836 (35%), Positives = 483/836 (57%), Gaps = 3/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G V  A Q+F ++S R   +W AML  Y   G        YS+M    +    + 
Sbjct: 87  LYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYV 146

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC   K    G  IH  V K  + S  F+ N+L+A+Y     F+ A ++F  M 
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDM- 205

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V +N++IS ++  G    AL +F EMQ  GL  +  T  + L AC        G 
Sbjct: 206 LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGK 265

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  +K+G +       +L+ +Y +CG +  A  +    +  + V WN ML  + Q  
Sbjct: 266 QLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQIS 325

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              K+ + F ++Q  G  P++      +      G +  G+++H+ +IK GF SD+ +  
Sbjct: 326 DLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+K  C++   ++   +  +D +SWT++IAGY Q++   +AL  F+ +Q  G+  
Sbjct: 386 VLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWP 445

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D + + S   AC+G+K M Q  +IH  +   G + D+ I N +V++Y +CG  + + ++F
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLF 505

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I+ KD ++W  +IS +  + L  +AL +F  M++A  + +  T +SA+SA ++L+ +K
Sbjct: 506 REIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIK 565

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GK+++G  ++ G   E  VA++L+ +Y +CG+++ A  +F+ +  ++ + W ++I +  
Sbjct: 566 QGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCS 625

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HGRG  A+DLF +M+ E   P+ +TF+ +L ACSH GL+ EG  + + M   Y L+P P
Sbjct: 626 QHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIP 685

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           +HYAC+VD+LGRA  L+ A +FV  M I   A +W  LL AC+VH N E+GE+ AK LLE
Sbjct: 686 DHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLE 745

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P +  +YVL+SN +A + KW + +QVR  M+  G++K PG SWIE+ N +H+F   D+
Sbjct: 746 LEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDR 805

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H  SD+IYK L+E+ ++L +  GY  +   + H  E+E+K    + HSE+LA+A+G++ 
Sbjct: 806 LHPLSDQIYKFLSELNDRLSKI-GYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMT 864

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                 +R+ KNLRVC DCHS+ K  S +  RE+V+RD  RFHHF +G CSCGDYW
Sbjct: 865 LPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 170/622 (27%), Positives = 296/622 (47%), Gaps = 15/622 (2%)

Query: 30  LGAYVSNGEPLRVLETY----SRMRVLGISVDAFTFPCVIKACAMLKD-LDCGAKIHGLV 84
           L  ++    P ++L       S  R LG S D     C ++AC    +      +IH   
Sbjct: 14  LAKFIVPDNPEKILSLVAAKASHHRALG-SAD---LTCALQACRGRGNRWPLVLEIHATS 69

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           +  G  +   I N L+ +YAK     +ARQ+F  +  + D V W +++S Y+  G   EA
Sbjct: 70  VVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR-DHVSWVAMLSGYAQRGLGKEA 128

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
             L+ +M    ++   Y   + L AC        G  IHA   K     + +V NALIA+
Sbjct: 129 FRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIAL 188

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           Y   G    A  V   +   D V++N++++G  Q      A+Q F E+Q +G +PD V  
Sbjct: 189 YLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTV 248

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
            + ++A   +G+L  GK+LH+Y +K G   D     +L+D+Y KC  +     +F     
Sbjct: 249 ASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDR 308

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
            + + W  ++  Y Q +   K+ E+F  +Q  G+  +      +L  C+    +   ++I
Sbjct: 309 TNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQI 368

Query: 385 HGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           H   I+ G  SD+ +   ++D+Y K   +D +R + E +E +DVVSWTSMI+ YV +   
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFC 428

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
            EAL  F  M +  V  D+I L SA SA + +  +++G +++  +   G+  + S+ ++L
Sbjct: 429 EEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTL 488

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           V++YARCG  + A  +F  +  KD I W  +I+  G     + A+ +F KM       + 
Sbjct: 489 VNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNV 548

Query: 564 ITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV 622
            TF++ + A ++   I +GK+     ++  +  +   E    L+ L G+   +E+A    
Sbjct: 549 FTFISAISALANLADIKQGKQVHGRAVKTGHTSE--TEVANALISLYGKCGSIEDAKMIF 606

Query: 623 RSMQIEPTAEVWCALLGACRVH 644
             M +      W  ++ +C  H
Sbjct: 607 SEMSLRNEVS-WNTIITSCSQH 627



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/575 (26%), Positives = 276/575 (48%), Gaps = 20/575 (3%)

Query: 166 ALQACEDSSFE-TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
           ALQAC        L +EIHA +V  G      + N LI +YA+ G + +A  V  +L ++
Sbjct: 48  ALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR 107

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
           D VSW +ML+G+ Q  L  +A + + ++      P      + +SA  +      G+ +H
Sbjct: 108 DHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
           A   KQ F S+  +GN L+ +Y          RVF  M   D +++ T+I+G+AQ     
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIV 403
            AL++F  +QL GL  D + + S+L AC+ +  + + K++H Y+++ G+S D +   +++
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLL 287

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y KCG+I+ + ++F   +  +VV W  M+ +Y       ++ E+F  M    +  +  
Sbjct: 288 DLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKF 347

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T    L   +    ++ G++++   I+ GF  +  V+  L+DMY++   LD A K+   +
Sbjct: 348 TYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEML 407

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS-----HSGL 578
           + +D++ WTSMI     H   + A+  F +M+     PD+I   +   AC+       GL
Sbjct: 408 EKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL 467

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV-WCAL 637
               + ++     D  +      +  LV+L  R    EEA+   R  +I+   E+ W  L
Sbjct: 468 QIHARVYVSGYAADISI------WNTLVNLYARCGRSEEAFSLFR--EIDHKDEITWNGL 519

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           +         E   +V  K+ +   G   N     +  +A     D++Q + ++ G  + 
Sbjct: 520 ISGFGQSRLYEQALMVFMKMSQ--AGAKYNVFTFISAISALANLADIKQGK-QVHGRAV- 575

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           KT  +S  E+ N + S   +  S  ++  I+ +++
Sbjct: 576 KTGHTSETEVANALISLYGKCGSIEDAKMIFSEMS 610


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 298/773 (38%), Positives = 467/773 (60%), Gaps = 17/773 (2%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G   H  ++  G     F+ N+L+ MY+KC     ARQ+FD   E+ D+V WN+I+ AY+
Sbjct: 96  GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPER-DLVTWNAILGAYA 154

Query: 137 AS-----GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           AS     G   E L LFR ++     T   T    L+ C +S        +H   +K G 
Sbjct: 155 ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 214

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
              V+V+ AL+ +Y++CG+M +A  +   +  +D V WN ML G+VQ  L  +A Q F E
Sbjct: 215 EWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSE 274

Query: 252 LQGAGQKPDQVCT---VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
              +G +PD+      +N    +G   +L  GK++H  A+K G  SD+ + N+L++MY+K
Sbjct: 275 FHRSGLRPDEFSVQLILNGCLWAGT-DDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSK 333

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
             C  +   VF  M   D ISW ++I+  AQ++   +++ LF  +  EGL  D   + S+
Sbjct: 334 MGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASI 393

Query: 369 LMACSGLKC-----MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            +A +   C     + Q K+IH + I+ G  SDL + + I+D+Y KCG++  +  VF  I
Sbjct: 394 TLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYI 453

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
            + D V+WTSMIS  V NG  ++AL +++ M ++ V  D  T  + + A+S ++ L++G+
Sbjct: 454 SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGR 513

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           +L+  +I+     +  V +SLVDMYA+CG ++ A ++F  +  +++ LW +M+     HG
Sbjct: 514 QLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHG 573

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
             + A++LF  M++    PD ++F+ +L ACSH+GL +E  ++L  M  DY ++P  EHY
Sbjct: 574 NAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHY 633

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
           +CLVD LGRA  ++EA + + +M  + +A +  ALLGACR+  + E G+ VA +L  L+P
Sbjct: 634 SCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEP 693

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
            +   YVL+SN++AA+ +W DV   R  M+   +KK PG SWI++ N +H F+  D+SH 
Sbjct: 694 FDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHP 753

Query: 723 ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE 782
           ++D IY K+ E+ + + RE GYV  T+FVL +VE+EEK + LY HSE+LAIAYG++ +  
Sbjct: 754 QADIIYDKVEEMMKTI-REDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPA 812

Query: 783 GSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            + IR+ KNLRVC DCH+  K +S++F RE+V+RDANRFHHF  GVCSCGDYW
Sbjct: 813 STTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865



 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 175/540 (32%), Positives = 277/540 (51%), Gaps = 15/540 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVS-----NGEPLRVLETYSRMRVLGIS 55
           MY KCGS+  A Q+FD   +R + TWNA+LGAY +     +G     L  +  +R    S
Sbjct: 121 MYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGS 180

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
               T   V+K C     L     +HG  +K G +   F+  +LV +Y+KC   R AR L
Sbjct: 181 TTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLL 240

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M E+ DVVLWN ++  Y   G   EA  LF E  R GL  + ++    L  C  +  
Sbjct: 241 FDWMRER-DVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGT 299

Query: 176 ET--LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
           +   LG ++H   VKSG +  V VAN+L+ MY++ G    A  V   +++ D +SWNSM+
Sbjct: 300 DDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMI 359

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQ-----VCTVNAVSASGRLGNLLNGKELHAYAI 288
           +   Q+ L  +++  F +L   G KPD      +    A  A G L  L  GK++HA+AI
Sbjct: 360 SSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAI 419

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K GF SDL + + ++DMY KC  +   G VF  ++A D ++WT++I+G   N    +AL 
Sbjct: 420 KAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALR 479

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYG 407
           ++  ++   +  D     +++ A S +  + Q +++H  +I+   +SD  +  ++VD+Y 
Sbjct: 480 IYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYA 539

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KCGNI+ +  +F+ +  +++  W +M+     +G A EA+ LF  M    +E D ++ + 
Sbjct: 540 KCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIG 599

Query: 468 ALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
            LSA S   +  +  E L+      G   E    S LVD   R G +  A+KV   +  K
Sbjct: 600 ILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 659



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 2/236 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +++A  +F+ +S      W +M+   V NG   + L  Y RMR   +  D +T
Sbjct: 436 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 495

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IKA + +  L+ G ++H  V+K    S  F+  SLV MYAKC +   A +LF +M 
Sbjct: 496 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 555

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + ++ LWN+++   +  G   EA+ LF+ M+  G+  +  +F+  L AC  +   +   
Sbjct: 556 VR-NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAY 614

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           E +H+     G   ++   + L+    R G + EA  V+  +  K S S N  L G
Sbjct: 615 EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 670



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 5/114 (4%)

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           L  A S   L  GK  +  I+  G   +  ++++L+ MY++CG+L  A +VF+    +DL
Sbjct: 84  LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 143

Query: 529 ILWTSMINA-----NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           + W +++ A     +   G  +  + LF  + A   +   +T   +L  C +SG
Sbjct: 144 VTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSG 197


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 310/826 (37%), Positives = 508/826 (61%), Gaps = 8/826 (0%)

Query: 14  LFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           +F +VS  + V+ WN+++ A+  NG     LE Y ++R   +S D +TFP VIKACA L 
Sbjct: 61  VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D + G  ++  +L  G++S  F+ N+LV MY++     +ARQ+FD M  + D+V WNS+I
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLI 179

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           S YS+ G   EAL ++ E++   +V +++T  + L A  +      G  +H   +KSG N
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
             V V N L+AMY +  + T+A  V  +++ +DSVS+N+M+ G+++ ++  ++++ F  L
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--L 297

Query: 253 QGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           +   Q KPD +   + + A G L +L   K ++ Y +K GFV +  + N L+D+YAKC  
Sbjct: 298 ENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           +     VF  M  +D +SW +II+GY Q+   ++A++LF+ + +    AD +    ++  
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417

Query: 372 CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
            + L  +   K +H   I+ G+  DL + NA++D+Y KCG +  S  +F S+ + D V+W
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTW 477

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
            ++IS+ V  G     L++   M ++ V  D  T +  L   +SL+  + GKE++  ++R
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR 537

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
            G+  E  + ++L++MY++CG L+ +++VF  +  +D++ WT MI A G++G G+ A++ 
Sbjct: 538 FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALET 597

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLG 610
           F  ME     PD + F+A++YACSHSGL++EG    E M+  Y++DP  EHYAC+VDLL 
Sbjct: 598 FADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLS 657

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVL 670
           R+  + +A +F+++M I+P A +W ++L ACR   + E  E V+++++EL+P +PG  +L
Sbjct: 658 RSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSIL 717

Query: 671 ISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKK 730
            SN +AA RKW  V  +R  ++   + K PG SWIE+G  +H F + D S  +S+ IYK 
Sbjct: 718 ASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKS 777

Query: 731 LAEITEKLEREGGYVAQTQFVLHNV-EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRIT 789
           L EI   L  + GY+   + V  N+ EEEEK +++ GHSERLAIA+G+L +  G+ +++ 
Sbjct: 778 L-EILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVM 836

Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           KNLRVC DCH   KL+S++ GRE++VRDANRFH F+ G CSC D W
Sbjct: 837 KNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 168/527 (31%), Positives = 291/527 (55%), Gaps = 8/527 (1%)

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P + +A +   +L+   +IH LV+  G DS+DF    L+  Y+   +   +  +F R+  
Sbjct: 8   PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            ++V LWNSII A+S +G   EAL  + +++   +  + YTF + ++AC       +G  
Sbjct: 68  AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           ++   +  G    ++V NAL+ MY+R G +T A  V  ++  +D VSWNS+++G+  +  
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           Y +A++ + EL+ +   PD     + + A G L  +  G+ LH +A+K G  S + + N 
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD-- 359
           L+ MY K        RVF +M  +D +S+ T+I GY +     +++ +F    LE LD  
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF----LENLDQF 303

Query: 360 -ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D++ + SVL AC  L+ +S  K I+ Y+++ G   +  + N ++DVY KCG++  +R+
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF S+E KD VSW S+IS Y+ +G   EA++LF +M     ++D IT +  +S ++ L+ 
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           LK GK L+   I+ G  ++ SV+++L+DMYA+CG +  + K+F+ + T D + W ++I+A
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
               G     + +  +M      PD  TFL  L  C+       GK+
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 167/542 (30%), Positives = 280/542 (51%), Gaps = 9/542 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + G +  A Q+FD++  R + +WN+++  Y S+G     LE Y  ++   I  D+FT
Sbjct: 150 MYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFT 209

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ A   L  +  G  +HG  LK G +S   + N LVAMY K      AR++FD M 
Sbjct: 210 VSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEM- 268

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  D V +N++I  Y       E++ +F E        +  T  + L+AC      +L  
Sbjct: 269 DVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAK 327

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            I+   +K+G  L+  V N LI +YA+CG M  A  V   +E KD+VSWNS+++G++Q+ 
Sbjct: 328 YIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSG 387

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +AM+ F+ +    ++ D +  +  +S S RL +L  GK LH+  IK G   DL + N
Sbjct: 388 DLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN 447

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  V    ++F  M   D ++W T+I+   +       L++   ++   +  
Sbjct: 448 ALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVP 507

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D+      L  C+ L      KEIH  ++R G  S+L I NA++++Y KCG ++ S  VF
Sbjct: 508 DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVF 567

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  +DVV+WT MI +Y   G   +ALE F  M ++ +  DS+  ++ + A S   ++ 
Sbjct: 568 ERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVD 627

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           +G  L  F  ++  + ++  +   + +VD+ +R   +  A +    +  K D  +W S++
Sbjct: 628 EG--LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685

Query: 536 NA 537
            A
Sbjct: 686 RA 687


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 296/820 (36%), Positives = 474/820 (57%), Gaps = 39/820 (4%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G+ V++ T+ C+I+ CA L+  + G  +H  + + G     ++ NSL+  Y+K  D    
Sbjct: 73  GLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASV 132

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
            Q+F RM  + DVV W+S+I+AY+ +    +A   F  M+   +  N  TF++ L+AC +
Sbjct: 133 EQVFRRMTLR-DVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNN 191

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
            S      EIH     SG    V VA ALI MY++CG+++ A  +  +++ ++ VSW ++
Sbjct: 192 YSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAI 251

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           +    Q+    +A + + ++  AG  P+ V  V+ +++      L  G+ +H++  ++G 
Sbjct: 252 IQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL 311

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-----AL 347
            +D+ + N L+ MY KC C+      F +M+ +D ISW+ +IAGYAQ+    K       
Sbjct: 312 ETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVF 371

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVY 406
           +L   ++ EG+  + +   S+L ACS    + Q ++IH  I + G  SD  +  AI ++Y
Sbjct: 372 QLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMY 431

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV-------- 458
            KCG+I  +  VF  +E+K+VV+W S+++ Y+  G    A ++F  M+  NV        
Sbjct: 432 AKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIA 491

Query: 459 -----------------------ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
                                  + D +T++S L A  +LS L++GK ++   ++ G   
Sbjct: 492 GYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLES 551

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  VA+SL+ MY++CG +  A  VF+ +  +D + W +M+   G HG G  A+DLF +M 
Sbjct: 552 DTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRML 611

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
            E   P+ ITF A++ AC  +GL+ EG++   IM+ D+++ P  +HY C+VDLLGRA  L
Sbjct: 612 KERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRL 671

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           +EA +F++ M  EP   VW ALLGAC+ H N +L E  A  +L L+P N   YV +SN++
Sbjct: 672 QEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIY 731

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           A + +W D  +VR  M   GLKK  G S IEI  +IH+F+A D +H E D I+ +L  +T
Sbjct: 732 AQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLT 791

Query: 736 EKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVC 795
           +++ +E GY    +FVLH+V+E +K + L  HSE+LAIAYG+LK+  G+ IRI KNLRVC
Sbjct: 792 KEM-KEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVC 850

Query: 796 VDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            DCH+  K +S++  RE+V RDANRFH+F+ G CSCGD+W
Sbjct: 851 GDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 168/586 (28%), Positives = 298/586 (50%), Gaps = 42/586 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G V   EQ+F +++ R V TW++M+ AY  N  P +  +T+ RM+   I  +  TF
Sbjct: 123 YSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITF 182

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++KAC     L+   +IH +V   G ++   +  +L+ MY+KC +   A ++F +M E
Sbjct: 183 LSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKE 242

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + +VV W +II A +   +  EA  L+ +M + G+  NA TFV+ L +C        G  
Sbjct: 243 R-NVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRR 301

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH+   + G    V VANALI MY +C  + +A     ++  +D +SW++M+ G+ Q+  
Sbjct: 302 IHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGY 361

Query: 242 YCK-----AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             K       Q    ++  G  P++V  ++ + A    G L  G+++HA   K GF SD 
Sbjct: 362 QDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDR 421

Query: 297 QIGNTLMDMYAKCCCV-------------------------------NYMGRVFYQMTAQ 325
            +   + +MYAKC  +                                   +VF +M+ +
Sbjct: 422 SLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTR 481

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           + +SW  +IAGYAQ+    K  EL  ++++EG   D + I S+L AC  L  + + K +H
Sbjct: 482 NVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVH 541

Query: 386 GYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
              ++ GL SD V+  +++ +Y KCG +  +R VF+ I ++D V+W +M++ Y  +G+  
Sbjct: 542 AEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGP 601

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SS 502
           EA++LF  M +  V  + IT  + +SA     ++++G+E+   I+++ F ++        
Sbjct: 602 EAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFR-IMQEDFRMKPGKQHYGC 660

Query: 503 LVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA 547
           +VD+  R G L  A +    +  + D+ +W +++ A   H   ++A
Sbjct: 661 MVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLA 706



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 235/478 (49%), Gaps = 46/478 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F K+ +R V +W A++ A   + +     E Y +M   GIS +A T
Sbjct: 223 MYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVT 282

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ +C   + L+ G +IH  + + G ++   + N+L+ MY KC   + AR+ FDRM 
Sbjct: 283 FVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMS 342

Query: 121 EKEDVVLWNSIISAYSASG-----QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            K DV+ W+++I+ Y+ SG        E   L   M+R G+  N  TF++ L+AC     
Sbjct: 343 -KRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGA 401

Query: 176 ETLGMEIHAATVKSG----QNLQVYVAN---------------------------ALIAM 204
              G +IHA   K G    ++LQ  + N                           +L+ M
Sbjct: 402 LEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTM 461

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           Y +CG +T A  V  ++  ++ VSWN M+ G+ Q+    K  +    ++  G +PD+V  
Sbjct: 462 YIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTI 521

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           ++ + A G L  L  GK +HA A+K G  SD  +  +L+ MY+KC  V     VF +++ 
Sbjct: 522 ISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISN 581

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D ++W  ++AGY Q+    +A++LF+ +  E +  + +   +V+ AC     + + +EI
Sbjct: 582 RDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREI 641

Query: 385 -----HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
                  + ++ G         +VD+ G+ G +  +    + +    D+  W +++ +
Sbjct: 642 FRIMQEDFRMKPGKQH---YGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGA 696



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 242/483 (50%), Gaps = 37/483 (7%)

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
           +G+  EA+ L   +++ GL+ N+ T+   ++ C        G  +H    + G  + +Y+
Sbjct: 56  AGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYL 115

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
            N+LI  Y++ G +     V  ++  +D V+W+SM+  +  N+   KA   F  ++ A  
Sbjct: 116 GNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANI 175

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +P+++  ++ + A      L   +E+H      G  +D+ +   L+ MY+KC  ++    
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACE 235

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           +F +M  ++ +SWT II   AQ+    +A EL+  +   G+  + +   S+L +C+  + 
Sbjct: 236 IFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEA 295

Query: 378 MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           +++ + IH +I  +GL +D+V+ NA++ +Y KC  I  +R  F+ +  +DV+SW++MI+ 
Sbjct: 296 LNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAG 355

Query: 437 YVHNGLA-----NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           Y  +G       +E  +L   M    V  + +T +S L A S    L++G++++  I + 
Sbjct: 356 YAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKV 415

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA-------------- 537
           GF  + S+ +++ +MYA+CG++  A +VF+ ++ K+++ W S++                
Sbjct: 416 GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVF 475

Query: 538 ---------------NGLHGRGKVA--IDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
                           G    G +A   +L   M+ E F PD +T +++L AC     + 
Sbjct: 476 SEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALE 535

Query: 581 EGK 583
            GK
Sbjct: 536 RGK 538



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 128/246 (52%), Gaps = 11/246 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  AE++F ++S R V +WN M+  Y  +G+  +V E  S M+V G   D  T
Sbjct: 461 MYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVT 520

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +++AC  L  L+ G  +H   +K G +S   +  SL+ MY+KC +  +AR +FD++ 
Sbjct: 521 IISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKIS 580

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V WN++++ Y   G   EA+ LF+ M +  +  N  TF A + AC  +     G 
Sbjct: 581 NR-DTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGR 639

Query: 181 EIHAA-----TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLT 234
           EI         +K G+  Q Y    ++ +  R G++ EA   + ++  +  +S W+++L 
Sbjct: 640 EIFRIMQEDFRMKPGK--QHY--GCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLG 695

Query: 235 GFVQND 240
               +D
Sbjct: 696 ACKSHD 701



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 79/150 (52%)

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
           G   EA++L  ++ +  +  +S T    +   + L   + GK ++  +   G  ++  + 
Sbjct: 57  GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           +SL++ Y++ G +    +VF  +  +D++ W+SMI A   +     A D F +M+  +  
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMR 590
           P+ ITFL++L AC++  ++ + ++   +++
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVK 206


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 283/773 (36%), Positives = 465/773 (60%), Gaps = 7/773 (0%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++ C  +K+L    +I  LV+K G  +       LV++++K     +A ++F+ + +K 
Sbjct: 55  LLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D  L+++++  Y+ +     AL     M+   +    Y F   L+ C D++    G EIH
Sbjct: 112 DA-LYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIH 170

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              + +     V+    ++ MYA+C ++ +A  +  ++  +D VSWN+++ GF QN    
Sbjct: 171 GQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAK 230

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           KA++    +Q  GQ+PD +  V  + A+  +G L+ GK +H YAI+ GF   + I   L 
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMY+KC  V     +F  M  +  +SW +++ GY QN    KA+ +F  +  EG+D   +
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            I   L AC+ L  + + K +H ++ +  L SD+ ++N+++ +Y KC  +D + ++F ++
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             +  VSW +MI  Y  NG  +EAL  F  M    ++ DS T+VS + A + LS+ +  K
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
            ++G IIR   +    V ++LVDMY++CGA+ +A K+F+ +  + +I W +MI+  G HG
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
            G+ A+DLF KM+  +  P+ IT+L+++ ACSHSGL++EG +  + M+ DY L+P  +HY
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHY 590

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
             +VDLLGRA  ++EA+ F+ +M I P   V+ A  GAC++H N E+GE  AKKL EL+P
Sbjct: 591 GAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNP 650

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
              G +VL++N++A++ KW  V +VR  M   GLKKTPG S +E+ N++HSF +   +H 
Sbjct: 651 DEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHP 710

Query: 723 ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE 782
           +S  IY  L E+  ++ +  GYV  T  +L +VE++ + Q+L  HSE+LAIA+G+L ++ 
Sbjct: 711 QSKRIYAFLEELVYEI-KAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSP 768

Query: 783 GSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G+ I + KNLRVC DCH+  K +S + GRE++VRD  RFHHF+ G+CSCGDYW
Sbjct: 769 GTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 167/517 (32%), Positives = 271/517 (52%), Gaps = 7/517 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++ K GS+ +A ++F+ +  +    ++ ML  Y  N      L    RMR   +    + 
Sbjct: 90  LFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYN 149

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++K C    DL  G +IHG ++   + +  F +  +V MYAKC     A ++FDRM 
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP 209

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D+V WN+II+ +S +G   +AL L   MQ  G   ++ T V  L A  D     +G 
Sbjct: 210 ER-DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGK 268

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +++G    V ++ AL  MY++CG +  A  +   ++ K  VSWNSM+ G+VQN 
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA+  F ++   G  P  V  + A+ A   LG+L  GK +H +  +    SD+ + N
Sbjct: 329 EPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMN 388

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MY+KC  V+    +F  +  +  +SW  +I GYAQN    +AL  F  ++  G+  
Sbjct: 389 SLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKP 448

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D   + SV+ A + L      K IHG IIR  L  ++ +  A+VD+Y KCG I  +R +F
Sbjct: 449 DSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLF 508

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + I  + V++W +MI  Y  +GL   AL+LF  M +  VE + IT +S +SA S   ++ 
Sbjct: 509 DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVD 568

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGAL 513
           +G  L  F  +++ + LE S+    ++VD+  R G +
Sbjct: 569 EG--LRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRI 603



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 213/430 (49%), Gaps = 13/430 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  + DA ++FD++ +R + +WN ++  +  NG   + LE   RM+  G   D+ T
Sbjct: 191 MYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSIT 250

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ A A +  L  G  IHG  ++ G+     I  +L  MY+KC     AR +FD M 
Sbjct: 251 LVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMD 310

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K  VV WNS++  Y  +G+  +A+ +F +M   G+     T + AL AC D      G 
Sbjct: 311 QKT-VVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK 369

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    +      + V N+LI+MY++C ++  A+ +   L  +  VSWN+M+ G+ QN 
Sbjct: 370 FVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNG 429

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E++  G KPD    V+ + A   L    + K +H   I+     ++ +  
Sbjct: 430 RVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTT 489

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  ++   ++F  ++ +  I+W  +I GY  +     AL+LF  ++   ++ 
Sbjct: 490 ALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEP 549

Query: 361 DVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           + +   SV+ ACS       GL+     K+ +G         +    A+VD+ G+ G I 
Sbjct: 550 NDITYLSVISACSHSGLVDEGLRHFKSMKQDYGL-----EPSMDHYGAMVDLLGRAGRIK 604

Query: 414 YSRNVFESIE 423
            + +  E++ 
Sbjct: 605 EAWDFIENMP 614



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 181/355 (50%), Gaps = 9/355 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV  A  +FD + Q+TV +WN+M+  YV NGEP + +  + +M   GI     T
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + ACA L DL+ G  +H  V +    S   ++NSL++MY+KC     A  +F+ + 
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  V  WN++I  Y+ +G+  EAL  F EM+ +G+  +++T V+ + A  + S      
Sbjct: 412 GRTHVS-WNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   ++S  +  ++V  AL+ MY++CG +  A  +   + ++  ++WN+M+ G+  + 
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L   A+  F +++    +P+ +  ++ +SA    G L++    H  ++KQ +  +     
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSG-LVDEGLRHFKSMKQDYGLEPS--- 586

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             MD Y     V+ +GR      A DFI    I  G         A ++ + +++
Sbjct: 587 --MDHYG--AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEV 637


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 304/836 (36%), Positives = 494/836 (59%), Gaps = 3/836 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y K G +  A+++FD + +R   +W AML     +G     +  + +M   G+    + 
Sbjct: 214  LYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYI 273

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            F  V+ AC  ++    G ++HGLVLK G+    ++ N+LV +Y++  +F  A Q+F+ M 
Sbjct: 274  FSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAML 333

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            ++++V  +NS+IS  S  G   +AL LF++M    L  +  T  + L AC       +G 
Sbjct: 334  QRDEVS-YNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGK 392

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            + H+  +K+G +  + +  AL+ +Y +C  +  A       E ++ V WN ML  +   D
Sbjct: 393  QFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLD 452

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               ++ + F ++Q  G +P+Q    + +     L  +  G+++H   +K GF  ++ + +
Sbjct: 453  NLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSS 512

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+DMYAK   +++  ++F ++  +D +SWT +IAGYAQ+    +AL LF+ +Q +G+ +
Sbjct: 513  VLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHS 572

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVF 419
            D +   S + AC+G++ ++Q ++IH      G SD L + NA+V +Y +CG +  +   F
Sbjct: 573  DNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAF 632

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            + I SKD +SW S+IS +  +G   EAL LF  M++A  E +S T   A+SAA++++ +K
Sbjct: 633  DKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVK 692

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
             GK+++  II+ G + E  V++ L+ +YA+CG +D A + F  +  K+ I W +M+    
Sbjct: 693  LGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYS 752

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             HG G  A+ LF  M+     P+H+TF+ +L ACSH GL++EG K+ + MR  + L P P
Sbjct: 753  QHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKP 812

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            EHYAC+VDLLGR+  L  A +FV  M I+P A V   LL AC VH N ++GE  A  LLE
Sbjct: 813  EHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLE 872

Query: 660  LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            L+P +   YVL+SN++A + KW   ++ R  M+  G+KK PG SWIE+ N +H+F A D+
Sbjct: 873  LEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQ 932

Query: 720  SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
             H   D+IY+ L ++ E L  E GY+ QT  +L++ E  +K      HSE+LAIA+G+L 
Sbjct: 933  KHPNVDKIYEYLRDLNE-LAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLS 991

Query: 780  STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             +  + I + KNLRVC DCH++ K VS++  R +VVRD+ RFHHF+ G+CSC DYW
Sbjct: 992  LSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 173/568 (30%), Positives = 302/568 (53%), Gaps = 3/568 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   G +  A  +FD++  R +  WN +L  +V+     RVL  + RM    +  D  T
Sbjct: 112 LYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERT 171

Query: 61  FPCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +  V++ C        C  KIH   +  GY+++ F+ N L+ +Y K      A+++FD +
Sbjct: 172 YAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGL 231

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +K D V W +++S  S SG   EA+ LF +M   G+    Y F + L AC    F  +G
Sbjct: 232 -QKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVG 290

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H   +K G +L+ YV NAL+ +Y+R G    A  V   +  +D VS+NS+++G  Q 
Sbjct: 291 EQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQ 350

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               KA++ F+++     KPD V   + +SA   +G LL GK+ H+YAIK G  SD+ + 
Sbjct: 351 GYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILE 410

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+D+Y KC  +      F     ++ + W  ++  Y   +   ++ ++F  +Q+EG++
Sbjct: 411 GALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIE 470

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            +     S+L  CS L+ +   ++IH  +++ G   ++ + + ++D+Y K G +D++  +
Sbjct: 471 PNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKI 530

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  ++ KDVVSWT+MI+ Y  +    EAL LF  M +  + SD+I   SA+SA + +  L
Sbjct: 531 FRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQAL 590

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            +G++++      G++ + SV ++LV +YARCG +  A   F+ + +KD I W S+I+  
Sbjct: 591 NQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGF 650

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITF 566
              G  + A+ LF +M       +  TF
Sbjct: 651 AQSGHCEEALSLFSQMSKAGQEINSFTF 678



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 159/539 (29%), Positives = 282/539 (52%), Gaps = 5/539 (0%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M   G+  ++ T+  ++  C        G K+HG +LK G+ +   +   L+ +Y    D
Sbjct: 59  MEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD 118

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              A  +FD M  +  +  WN ++  + A       LGLFR M +  +  +  T+   L+
Sbjct: 119 LDGAVTVFDEMPVRP-LSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLR 177

Query: 169 ACE--DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
            C   D  F  +  +IHA T+  G    ++V N LI +Y + G +  A  V   L+ +DS
Sbjct: 178 GCGGGDVPFHCV-EKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDS 236

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           VSW +ML+G  Q+    +A+  F ++  +G  P      + +SA  ++     G++LH  
Sbjct: 237 VSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGL 296

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            +KQGF  +  + N L+ +Y++        +VF  M  +D +S+ ++I+G +Q     KA
Sbjct: 297 VLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKA 356

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDV 405
           LELF+ + L+ L  D + + S+L ACS +  +   K+ H Y I+ G+ SD+++  A++D+
Sbjct: 357 LELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDL 416

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y KC +I  +   F S E+++VV W  M+ +Y      NE+ ++F  M    +E +  T 
Sbjct: 417 YVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTY 476

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S L   SSL  +  G++++  +++ GF     V+S L+DMYA+ G LD A K+F  ++ 
Sbjct: 477 PSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKE 536

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           KD++ WT+MI     H +   A++LF +M+ +    D+I F + + AC+    +N+G++
Sbjct: 537 KDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQ 595



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 256/514 (49%), Gaps = 6/514 (1%)

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
           AYS        +     M+  G+  N+ T++  L  C  S + + G ++H   +K G   
Sbjct: 42  AYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCA 101

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
           +V +   L+ +Y   G +  A  V  ++  +    WN +L  FV   +  + +  FR + 
Sbjct: 102 EVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRML 161

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
               KPD+      +   G      +  E +HA  I  G+ + L + N L+D+Y K   +
Sbjct: 162 QEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFL 221

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
           N   +VF  +  +D +SW  +++G +Q+ C  +A+ LF  +   G+     I  SVL AC
Sbjct: 222 NSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSAC 281

Query: 373 SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           + ++     +++HG ++++G S +  + NA+V +Y + GN   +  VF ++  +D VS+ 
Sbjct: 282 TKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYN 341

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           S+IS     G +++ALELF  M    ++ D +T+ S LSA SS+  L  GK+ + + I+ 
Sbjct: 342 SLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKA 401

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           G + +  +  +L+D+Y +C  +  A++ F   +T++++LW  M+ A GL      +  +F
Sbjct: 402 GMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIF 461

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLG 610
            +M+ E   P+  T+ ++L  CS    ++ G++   ++++  +Q + +    + L+D+  
Sbjct: 462 TQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVS--SVLIDMYA 519

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
           +   L+ A +  R ++ E     W A++     H
Sbjct: 520 KLGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQH 552



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 208/434 (47%), Gaps = 21/434 (4%)

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G   +G +LH   +K GF +++ +   LMD+Y     ++    VF +M  +    W  ++
Sbjct: 82  GWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVL 141

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG----LKCMSQTKEIHGYIIR 390
             +       + L LFR +  E +  D      VL  C G      C+   ++IH   I 
Sbjct: 142 HRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCV---EKIHARTIT 198

Query: 391 KGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
            G  + L + N ++D+Y K G ++ ++ VF+ ++ +D VSW +M+S    +G   EA+ L
Sbjct: 199 HGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLL 258

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           F  M+ + V        S LSA + +   K G++L+G ++++GF+LE  V ++LV +Y+R
Sbjct: 259 FCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSR 318

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
            G    A +VFN +  +D + + S+I+     G    A++LF KM  +   PD +T  +L
Sbjct: 319 LGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASL 378

Query: 570 LYACSHSGLINEGKKFLEI-----MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           L ACS  G +  GK+F        M  D  L+        L+DL  + + ++ A++F  S
Sbjct: 379 LSACSSVGALLVGKQFHSYAIKAGMSSDIILE------GALLDLYVKCSDIKTAHEFFLS 432

Query: 625 MQIEPTAEVWCALLGACRVHSN-KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKD 683
            + E    +W  +L A  +  N  E  +I  +  +E    N   Y  I    ++ R    
Sbjct: 433 TETENVV-LWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDL 491

Query: 684 VEQVRMRMRGSGLK 697
            EQ+  ++  +G +
Sbjct: 492 GEQIHTQVLKTGFQ 505



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 136/307 (44%), Gaps = 10/307 (3%)

Query: 325 QDFISWTTIIA-GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
           Q F+   T ++  Y+ +      +     ++  G+ A+      +L  C      S   +
Sbjct: 30  QKFLEHNTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWK 89

Query: 384 IHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           +HG I++ G  +++V+   ++D+Y   G++D +  VF+ +  + +  W  ++  +V   +
Sbjct: 90  LHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKM 149

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSI-LKKGKELNGFIIRKGFNLEGSVAS 501
           A   L LF  M +  V+ D  T    L       +     ++++   I  G+     V +
Sbjct: 150 AGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCN 209

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
            L+D+Y + G L+ A KVF+ +Q +D + W +M++     G  + A+ LF +M      P
Sbjct: 210 PLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYP 269

Query: 562 DHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYAC--LVDLLGRANHLEEA 618
               F ++L AC+       G++    +++  + L    E Y C  LV L  R  +   A
Sbjct: 270 TPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSL----ETYVCNALVTLYSRLGNFIPA 325

Query: 619 YQFVRSM 625
            Q   +M
Sbjct: 326 EQVFNAM 332


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 297/836 (35%), Positives = 478/836 (57%), Gaps = 3/836 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y KCGS   A ++F ++ +R V +W A++  +V+ G     +  +  MR  G+  + FT
Sbjct: 172  VYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFT 231

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            +   +KAC+M  DL+ G ++H   +K G  S  F+ ++LV +YAKC +   A ++F  M 
Sbjct: 232  YATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCM- 290

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             K++ V WN++++ ++  G   + L LF  M    +  + +T    L+ C +S     G 
Sbjct: 291  PKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQ 350

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             +H+  ++ G  L  +++  L+ MY++CG   +A  V  ++E+ D VSW++++T   Q  
Sbjct: 351  IVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKG 410

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               +A + F+ ++ +G  P+Q    + VSA+  LG+L  G+ +HA   K GF  D  + N
Sbjct: 411  QSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCN 470

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+ MY K   V    RVF   T +D ISW  +++G+  N      L +F  +  EG + 
Sbjct: 471  ALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNP 530

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
            ++    S+L +CS L  +   K++H  I++  L  +  +  A+VD+Y K   ++ +  +F
Sbjct: 531  NMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIF 590

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
              +  +D+ +WT +++ Y  +G   +A++ F  M    V+ +  TL S+LS  S ++ L 
Sbjct: 591  NRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLD 650

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
             G++L+   I+ G + +  VAS+LVDMYA+CG ++ A  VF+ + ++D + W ++I    
Sbjct: 651  SGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYS 710

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             HG+G  A+  F  M  E   PD +TF+ +L ACSH GLI EGKK    +   Y + P  
Sbjct: 711  QHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTI 770

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            EHYAC+VD+LGRA    E   F+  M++     +W  +LGAC++H N E GE  A KL E
Sbjct: 771  EHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFE 830

Query: 660  LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            L+P    NY+L+SN+FAA   W DV  VR  M   G+KK PG SW+E+  ++H F++ D 
Sbjct: 831  LEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDG 890

Query: 720  SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            SH +  EI+ KL ++ +KL    GY   T  VLHNV + EK ++L+ HSERLA+A+ +L 
Sbjct: 891  SHPKIREIHLKLQDLHQKL-MSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLS 949

Query: 780  STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            ++    IRI KNLR+C DCH F K +S +  +ELVVRD N FHHF+ G CSC ++W
Sbjct: 950  TSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 162/551 (29%), Positives = 284/551 (51%), Gaps = 7/551 (1%)

Query: 41  RVLETYSRMRVL-GISVDA----FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI 95
           ++ ET  + R+  G+  D+      +  +++ CA   DL+ G  IHG V+K G +    +
Sbjct: 106 KIPETVEKKRIWRGLDFDSKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHL 165

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            NSLV +YAKC     A ++F  + E+ DVV W ++I+ + A G    A+ LF EM+R G
Sbjct: 166 WNSLVNVYAKCGSANYACKVFGEIPER-DVVSWTALITGFVAEGYGSGAVNLFCEMRREG 224

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           +  N +T+  AL+AC        G ++HA  +K G    ++V +AL+ +YA+CG+M  A 
Sbjct: 225 VEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAE 284

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            V   +  +++VSWN++L GF Q     K +  F  + G+     +      +      G
Sbjct: 285 RVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSG 344

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           NL  G+ +H+ AI+ G   D  I   L+DMY+KC       +VF ++   D +SW+ II 
Sbjct: 345 NLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIIT 404

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
              Q     +A E+F+ ++  G+  +   + S++ A + L  +   + IH  + + G   
Sbjct: 405 CLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEY 464

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           D  + NA+V +Y K G++     VFE+  ++D++SW +++S +  N   +  L +F  M 
Sbjct: 465 DNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQML 524

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
                 +  T +S L + SSLS +  GK+++  I++   +    V ++LVDMYA+   L+
Sbjct: 525 AEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLE 584

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A  +FN +  +DL  WT ++      G+G+ A+  F +M+ E   P+  T  + L  CS
Sbjct: 585 DAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCS 644

Query: 575 HSGLINEGKKF 585
               ++ G++ 
Sbjct: 645 RIATLDSGRQL 655



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 151/521 (28%), Positives = 257/521 (49%), Gaps = 10/521 (1%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
           +   L+ C        G  IH   +KSG N   ++ N+L+ +YA+CG    A  V  ++ 
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
            +D VSW +++TGFV       A+  F E++  G + ++     A+ A     +L  GK+
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           +HA AIK G  SDL +G+ L+D+YAKC  +    RVF  M  Q+ +SW  ++ G+AQ   
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNA 401
             K L LF  +    ++     + +VL  C+    +   + +H   IR G   D  I   
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           +VD+Y KCG    +  VF  IE  DVVSW+++I+     G + EA E+F  M  + V  +
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
             TL S +SAA+ L  L  G+ ++  + + GF  + +V ++LV MY + G++    +VF 
Sbjct: 431 QFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFE 490

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
               +DLI W ++++    +      + +F +M AE F P+  TF+++L +CS    ++ 
Sbjct: 491 ATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDL 550

Query: 582 GKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           GK+   +I++    LD        LVD+  +   LE+A      + I+     W  ++  
Sbjct: 551 GKQVHAQIVK--NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAG 607

Query: 641 CRVHSNKELGEIVAKKLLEL--DPGNPGNYVLISNVFAASR 679
              ++    GE   K  +++  +   P  + L S++   SR
Sbjct: 608 ---YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSR 645


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 296/836 (35%), Positives = 483/836 (57%), Gaps = 4/836 (0%)

Query: 2    YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
            YG  G V +A++LF+++    V +W +++  Y  +G P  VL  Y RMR  G+S +  TF
Sbjct: 891  YGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTF 950

Query: 62   PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              V  +C +L+D   G ++ G +++ G++ +  + NSL++M++      +A  +FD M E
Sbjct: 951  ATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNE 1010

Query: 122  KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
              D++ WN++ISAY+  G C E+L  F  M+ +   TN+ T  + L  C        G  
Sbjct: 1011 C-DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRG 1069

Query: 182  IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            IH   VK G +  V + N L+ +Y+  G+  +A  V   +  +D +SWNSM+  +VQ+  
Sbjct: 1070 IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGK 1129

Query: 242  YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
                ++   EL   G+  + V   +A++A      L+  K +HA  I  GF   L +GN 
Sbjct: 1130 CLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA 1189

Query: 302  LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
            L+ MY K   +    +V   M   D ++W  +I G+A+N    +A++ ++ ++ +G+ A+
Sbjct: 1190 LVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPAN 1249

Query: 362  VMIIGSVLMACSGLK-CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
             + + SVL ACS     +     IH +I+  G  SD  + N+++ +Y KCG+++ S  +F
Sbjct: 1250 YITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIF 1309

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            + + +K  ++W +M+++  H+G   EAL++F  M    V  D  +    L+A ++L++L+
Sbjct: 1310 DGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLE 1369

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            +G++L+G +I+ GF  +  V ++ +DMY +CG +    K+      +  + W  +I+A  
Sbjct: 1370 EGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFA 1429

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             HG  + A + F++M      PDH+TF++LL AC+H GL++EG  + + M  ++ + P  
Sbjct: 1430 RHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGI 1489

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            EH  C++DLLGR+  L  A  F++ M + P    W +LL ACR+H N EL    A+ LLE
Sbjct: 1490 EHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLE 1549

Query: 660  LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            LDP +   YVL SNV A S KW+DVE +R  M  + +KK P  SW+++ +K+HSF   +K
Sbjct: 1550 LDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEK 1609

Query: 720  SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
             H ++  I  KL E+  K+ +E GYV  T F LH+++EE+K   L+ HSERLA+A+G++ 
Sbjct: 1610 YHPQASRISAKLGELM-KMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLIN 1668

Query: 780  STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            + E S +RI KNLRVC DCHS  K VS + GR++V+RD  RFHHF  G CSCGDYW
Sbjct: 1669 TPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score =  301 bits (772), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 169/550 (30%), Positives = 299/550 (54%), Gaps = 2/550 (0%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
           ++  LQ C D   +  G  IH   + +G    +++   LI  Y + G +  A  V   + 
Sbjct: 33  YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMP 92

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
            +  VSW +M++G+ QN  + KA   F +++  G K +Q    +A+ A   L  L  G +
Sbjct: 93  ERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQ 152

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           +     K  FV +L + + L+D ++KC  +     +F  M  +D +SW  +I GYA    
Sbjct: 153 VQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGF 212

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI 402
              +  +FR++   GL  D   +GSVL A +    +    +IHG I + G     I+  +
Sbjct: 213 ADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGL 272

Query: 403 -VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN-EALELFYLMNEANVES 460
            ++ Y K G++  ++++ + +  KD+ S T++I+ Y H G+ + +AL+LF  MN+ N+  
Sbjct: 273 LINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGM 332

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D + L S L+  ++L+    G +++ F ++   + + ++ ++L+DMYA+ G ++ A + F
Sbjct: 333 DDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAF 392

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
           + ++ K++I WTS+I+    HG G +A+ L+ KME++ F P+ +TFL+LL+ACSH+GL  
Sbjct: 393 DEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTA 452

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           EG +    M   Y + P  EHY+C+VDL  R   LEEAY  +  + I+  A +W A+LGA
Sbjct: 453 EGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGA 512

Query: 641 CRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTP 700
             ++    LG+  A  L  + P N  NYV+++++++A+  W D  ++R  M     KK  
Sbjct: 513 SSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNA 572

Query: 701 GSSWIEIGNK 710
           G S+ +   K
Sbjct: 573 GYSFFQATKK 582



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 185/676 (27%), Positives = 342/676 (50%), Gaps = 9/676 (1%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MY K G++  A  +FD++  R   +W+ ML  YV  G     +  + +M  LG+  + F 
Sbjct: 788  MYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFM 847

Query: 61   FPCVIKACAMLKDL-DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
               +I AC+    + D G ++HG V+K G     ++  +LV  Y        A++LF+ M
Sbjct: 848  VASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM 907

Query: 120  GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             +  +VV W S++  YS SG   E L +++ M++ G+  N  TF     +C     + LG
Sbjct: 908  PD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 966

Query: 180  MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             ++    ++ G    V VAN+LI+M++    + EA  V   +   D +SWN+M++ +  +
Sbjct: 967  YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 1026

Query: 240  DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             L  ++++ F  ++    + +     + +S    + NL  G+ +H   +K G  S++ I 
Sbjct: 1027 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 1086

Query: 300  NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            NTL+ +Y++         VF  MT +D ISW +++A Y Q+   L  L++   +   G  
Sbjct: 1087 NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKV 1146

Query: 360  ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNV 418
             + +   S L ACS  +C+ ++K +H  II  G  D +I+ NA+V +YGK G +  ++ V
Sbjct: 1147 MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 1206

Query: 419  FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL-SI 477
             +++   D V+W ++I  +  N   NEA++ + L+ E  + ++ IT+VS L A S+   +
Sbjct: 1207 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDL 1266

Query: 478  LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
            LK G  ++  I+  GF  +  V +SL+ MYA+CG L+ +N +F+ +  K  I W +M+ A
Sbjct: 1267 LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAA 1326

Query: 538  NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLD 596
            N  HG G+ A+ +F +M       D  +F   L A ++  ++ EG++    +++  ++ D
Sbjct: 1327 NAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESD 1386

Query: 597  PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
                + A  +D+ G+   + +  + +    I  +   W  L+ A   H   +       +
Sbjct: 1387 LHVTNAA--MDMYGKCGEMHDVLKML-PQPINRSRLSWNILISAFARHGCFQKARETFHE 1443

Query: 657  LLELDPGNPGNYVLIS 672
            +L+L P  P +   +S
Sbjct: 1444 MLKLGP-KPDHVTFVS 1458



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 161/552 (29%), Positives = 287/552 (51%), Gaps = 7/552 (1%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            M+    SV +A  +FD +++  + +WNAM+ AY  +G     L  +  MR L    ++ T
Sbjct: 991  MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 1050

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               ++  C+ + +L  G  IHGLV+K G DS   I N+L+ +Y++      A  +F  M 
Sbjct: 1051 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 1110

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            E+ D++ WNS+++ Y   G+CL+ L +  E+ ++G V N  TF +AL AC +        
Sbjct: 1111 ER-DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESK 1169

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             +HA  + +G +  + V NAL+ MY + G M EA  VL  +   D V+WN+++ G  +N+
Sbjct: 1170 IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENE 1229

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL-NGKELHAYAIKQGFVSDLQIG 299
               +A++ ++ ++  G   + +  V+ + A     +LL +G  +HA+ +  GF SD  + 
Sbjct: 1230 EPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVK 1289

Query: 300  NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            N+L+ MYAKC  +N    +F  +  +  I+W  ++A  A + C  +AL++F  ++  G++
Sbjct: 1290 NSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVN 1349

Query: 360  ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
             D       L A + L  + + +++HG +I+ G  SDL + NA +D+YGKCG +     +
Sbjct: 1350 LDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKM 1409

Query: 419  FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
                 ++  +SW  +IS++  +G   +A E F+ M +   + D +T VS LSA +   ++
Sbjct: 1410 LPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLV 1469

Query: 479  KKGKELNGFIIRKGFNLEG-SVASSLVDMYARCGALDIANKVFN--CVQTKDLILWTSMI 535
             +G      + R+     G      ++D+  R G L  A        V   DL  W S++
Sbjct: 1470 DEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLA-WRSLL 1528

Query: 536  NANGLHGRGKVA 547
             A  +HG  ++A
Sbjct: 1529 AACRIHGNLELA 1540



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 273/557 (49%), Gaps = 12/557 (2%)

Query: 41  RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV 100
           R+ E    +      +D   +  +++ C   K    G  IH  ++  G+ S   +   L+
Sbjct: 13  RLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLI 72

Query: 101 AMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
             Y K  D   AR +FD M E+  VV W +++S YS +G+  +A  LF +M+  G+  N 
Sbjct: 73  IFYVKVGDVIAARNVFDGMPERS-VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQ 131

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
           +T+ +AL+AC       +G+++     K      ++V +AL+  +++CGKM +A+ +   
Sbjct: 132 FTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGT 191

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +  +D VSWN+M+ G+        +   FR +   G  PD     + + AS   G L+  
Sbjct: 192 MMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIA 251

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
            ++H    + G+ S   +   L++ YAK   +     +   M  +D  S T +I GYA  
Sbjct: 252 NQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHE 311

Query: 341 NCH-LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
             + + AL+LF+ +    +  D +I+ S+L  C+ L   +   +IH + ++   S D+ +
Sbjct: 312 GIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAM 371

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            NA++D+Y K G I+ ++  F+ +E K+V+SWTS+IS Y  +G  + A+ L+  M     
Sbjct: 372 GNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGF 431

Query: 459 ESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           + + +T +S L A S   +  +G E  N  + +          S +VD++AR G L+ A 
Sbjct: 432 KPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAY 491

Query: 518 KVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYAC 573
            +   +  K +  LW +++ A+ ++G    GK A    + M+ E    + + ++ L    
Sbjct: 492 NLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPE----NSVNYVVLASIY 547

Query: 574 SHSGLINEGKKFLEIMR 590
           S +GL ++  K  ++M 
Sbjct: 548 SAAGLWDDAWKIRKLME 564



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 238/483 (49%), Gaps = 19/483 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G V+ A  +FD + +R+V +W AM+  Y  NG   +    +S MR  G+  + FT+
Sbjct: 75  YVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTY 134

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              ++AC  L+ LD G ++ G + K  +    F+ ++LV  ++KC     A  LF  M E
Sbjct: 135 GSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMME 194

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV WN++I  Y+  G   ++  +FR M R GLV + YT  + L+A  +     +  +
Sbjct: 195 R-DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQ 253

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH    + G      V   LI  YA+ G +  A  +   +  KD  S  +++TG+    +
Sbjct: 254 IHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGI 313

Query: 242 Y-CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           Y   A+  F+E+       D V   + ++    L +   G ++HA+A+K     D+ +GN
Sbjct: 314 YSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGN 373

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAK   +    R F +M  ++ ISWT++I+GYA++     A+ L++ ++ +G   
Sbjct: 374 ALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKP 433

Query: 361 DVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           + +   S+L ACS       G +C +    ++ Y I+         + +VD++ + G ++
Sbjct: 434 NDVTFLSLLFACSHTGLTAEGCECFNNM--VNKYNIKPRAEH---YSCMVDLFARQGLLE 488

Query: 414 YSRNVFESIESKDVVS-WTSMI---SSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
            + N+   I+ K   S W +++   S Y +  L  EA    + M   N   + + L S  
Sbjct: 489 EAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPEN-SVNYVVLASIY 547

Query: 470 SAA 472
           SAA
Sbjct: 548 SAA 550



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 258/521 (49%), Gaps = 5/521 (0%)

Query: 56   VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            ++A  FP  +K  + +     G  +H   +    +   F  N+L+ MY+K  +   AR +
Sbjct: 744  LNAVNFP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYV 801

Query: 116  FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            FD M  + +   W++++S Y   G   EA+GLF +M  +G+  N +   + + AC  S +
Sbjct: 802  FDEMRHRNEAS-WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGY 860

Query: 176  -ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
                G ++H   VK+G    VYV  AL+  Y   G +  A  +  ++ + + VSW S++ 
Sbjct: 861  MADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMV 920

Query: 235  GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            G+  +    + +  ++ ++  G   +Q       S+ G L + + G ++  + I+ GF  
Sbjct: 921  GYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFED 980

Query: 295  DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
             + + N+L+ M++    V     VF  M   D ISW  +I+ YA +    ++L  F  ++
Sbjct: 981  SVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 1040

Query: 355  LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
                + +   + S+L  CS +  +   + IHG +++ GL S++ I N ++ +Y + G  +
Sbjct: 1041 HLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSE 1100

Query: 414  YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
             +  VF+++  +D++SW SM++ YV +G   + L++   + +     + +T  SAL+A S
Sbjct: 1101 DAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACS 1160

Query: 474  SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            +   L + K ++  II  GF+    V ++LV MY + G +  A KV   +   D + W +
Sbjct: 1161 NPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNA 1220

Query: 534  MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            +I  +  +     A+  +  +  +    ++IT +++L ACS
Sbjct: 1221 LIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 1261



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 1/140 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + DA++ FD++ ++ V +W +++  Y  +G     +  Y +M   G   +  T
Sbjct: 378 MYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVT 437

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC+       G +  + +V K          + +V ++A+     +A  L  ++
Sbjct: 438 FLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKI 497

Query: 120 GEKEDVVLWNSIISAYSASG 139
             K +  LW +I+ A S  G
Sbjct: 498 DIKHNASLWGAILGASSIYG 517



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 19/238 (7%)

Query: 351 RTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK---GLSDLVILNAIVDVY 406
           R+VQL G L   V  +GS L    G++ + + K +  +  +K    +S +   +A++   
Sbjct: 641 RSVQLNGNLTVSVDEVGSAL----GMRQVEKPKTVGSHTGQKQWAPVSTITTASALI--- 693

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
               N     N  E ++  D+   TS   S     L  +  ++F      +     +  V
Sbjct: 694 ----NETPVENFAEQVKDDDLK--TSNAGSRRWGCLDGDIAKVFLQQQHTDYGIRCLNAV 747

Query: 467 S-ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
           +  L   S ++    GK L+ F I    NL     ++L++MY++ G ++ A  VF+ ++ 
Sbjct: 748 NFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRH 807

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG-LINEG 582
           ++   W++M++     G  + A+ LF +M      P+     +L+ ACS SG + +EG
Sbjct: 808 RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEG 865


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 295/838 (35%), Positives = 487/838 (58%), Gaps = 6/838 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +YG  G V  + ++F+++  R V +W +++  Y   GEP  V++ Y  MR  G+  +  +
Sbjct: 204  LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENS 263

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               VI +C +LKD   G +I G V+K G +S   + NSL++M+    +   A  +F+++ 
Sbjct: 264  MSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQIS 323

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            E+ D + WNSI++AY+ +G   E+  +F  M+R     N+ T    L    D   +  G 
Sbjct: 324  ER-DTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGR 382

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             IH   VK G +  V V N L+ MYA  G+  EA  V  Q+  KD +SWNS++  FV + 
Sbjct: 383  GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDG 442

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                A+     +   G+  + V   +A++A         G+ LH   +  G   +  IGN
Sbjct: 443  RSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGN 502

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+ MY K   ++   RV  QM  +D ++W  +I GYA+N    KAL  F+T+++EG+ A
Sbjct: 503  ALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSA 562

Query: 361  DVMIIGSVLMAC--SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
            + + + SVL AC   G   + + K +H YI+  G  SD  + N+++ +Y KCG++  S++
Sbjct: 563  NYITVVSVLSACLVPG-DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 621

Query: 418  VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            +F  ++++ +++W +++++  H+G   E L+L   M    +  D  +    LSAA+ L++
Sbjct: 622  LFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAV 681

Query: 478  LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
            L++G++L+G  ++ GF L+  + ++  DMY++CG +    K+      + L  W  +I+A
Sbjct: 682  LEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 741

Query: 538  NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
             G HG  +   + F++M      P H+TF++LL ACSH GL+++G  + +++  D+ L+P
Sbjct: 742  LGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEP 801

Query: 598  WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
              EH  C++DLLGR+  L EA  F+  M ++P   VW +LL +C++H + + G   A+ L
Sbjct: 802  AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENL 861

Query: 658  LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
             +L+P +   +VL SN+FA + +W+DVE VR +M    +KK    SW+++ +K+ SF   
Sbjct: 862  SKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG 921

Query: 718  DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
            D++H ++ EIY KL +I +KL +E GYVA T   L + +EE+K   L+ HSERLA+AY +
Sbjct: 922  DRTHPQTMEIYAKLEDI-KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 980

Query: 778  LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            + + EGS +RI KNLR+C DCHS  K VSR+ GR +V+RD  RFHHFE+G+CSC DYW
Sbjct: 981  MSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038



 Score =  285 bits (730), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 187/680 (27%), Positives = 333/680 (48%), Gaps = 43/680 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G V  A  LFDK+  R   +WN M+   V  G  L  +E + +M  LGI   +F 
Sbjct: 102 MYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFV 161

Query: 61  FPCVIKAC----AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
              ++ AC    +M ++   G ++HG V K G  S  ++  +++ +Y        +R++F
Sbjct: 162 IASLVTACGRSGSMFRE---GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 218

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           + M ++ +VV W S++  YS  G+  E + +++ M+  G+  N  +    + +C     E
Sbjct: 219 EEMPDR-NVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDE 277

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +LG +I    +KSG   ++ V N+LI+M+   G +  A  +  Q+  +D++SWNS++  +
Sbjct: 278 SLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAY 337

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            QN    ++ + F  ++    + +       +S  G + +   G+ +H   +K GF S +
Sbjct: 338 AQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVV 397

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + NTL+ MYA          VF QM  +D ISW +++A +  +   L AL +  ++   
Sbjct: 398 CVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRT 457

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYS 415
           G   + +   S L AC   +   + + +HG ++  GL D  +I NA+V +YGK G +  S
Sbjct: 458 GKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTS 517

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA-SS 474
           R V   +  +DVV+W ++I  Y  N   ++AL  F  +    V ++ IT+VS LSA    
Sbjct: 518 RRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVP 577

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
             +L++GK L+ +I+  GF  +  V +SL+ MYA+CG L  +  +FN +  + +I W ++
Sbjct: 578 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAI 637

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRCDY 593
           + AN  HG G+  + L  KM +   + D  +F   L A +   ++ EG++   + ++  +
Sbjct: 638 LAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 697

Query: 594 QLDPW----------------------P-------EHYACLVDLLGRANHLE---EAYQF 621
           +LD +                      P         +  L+  LGR  + E   E +  
Sbjct: 698 ELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHE 757

Query: 622 VRSMQIEPTAEVWCALLGAC 641
           +  M I+P    + +LL AC
Sbjct: 758 MLEMGIKPGHVTFVSLLTAC 777



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 269/506 (53%), Gaps = 10/506 (1%)

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           ET G  +HA  VK    L V   N LI MY + G++  A  +  ++  ++ VSWN+M++G
Sbjct: 74  ETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSG 133

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVS 294
            V+  LY + M+FF+++   G KP      + V+A GR G++   G ++H +  K G +S
Sbjct: 134 IVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLS 193

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D+ +   ++ +Y     V+   +VF +M  ++ +SWT+++ GY+      + ++++++++
Sbjct: 194 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMR 253

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
            EG++ +   +  V+ +C  LK  S  ++I G +I+ GL S L + N+++ ++G  GN+D
Sbjct: 254 GEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVD 313

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           Y+  +F  I  +D +SW S++++Y  NG   E+  +F LM   + E +S T+ + LS   
Sbjct: 314 YANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLG 373

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            +   K G+ ++G +++ GF+    V ++L+ MYA  G  + A+ VF  + TKDLI W S
Sbjct: 374 DVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNS 433

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           ++ +    GR   A+ +   M     + +++TF + L AC      ++G+    ++    
Sbjct: 434 LMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSG 493

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV--WCALLGACRVHSNKELGE 651
             D      A LV + G+   +  + + +  M   P  +V  W AL+G    + + +   
Sbjct: 494 LFDNQIIGNA-LVSMYGKIGGMSTSRRVLLQM---PRRDVVAWNALIGGYAENEDPDKA- 548

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAA 677
           + A + L ++ G   NY+ + +V +A
Sbjct: 549 LAAFQTLRVE-GVSANYITVVSVLSA 573



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 261/512 (50%), Gaps = 4/512 (0%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G  +H L +K     +    N+L+ MY K    + AR LFD+M  + +V  WN+++S   
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVS-WNTMMSGIV 135

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS-SFETLGMEIHAATVKSGQNLQV 195
             G  LE +  F++M  +G+  +++   + + AC  S S    G+++H    KSG    V
Sbjct: 136 RVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 195

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           YV+ A++ +Y   G ++ +  V  ++ +++ VSW S++ G+       + +  ++ ++G 
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGE 255

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           G + ++      +S+ G L +   G+++    IK G  S L + N+L+ M+     V+Y 
Sbjct: 256 GVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYA 315

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
             +F Q++ +D ISW +I+A YAQN    ++  +F  ++    + +   + ++L     +
Sbjct: 316 NYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDV 375

Query: 376 KCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
                 + IHG +++ G   +V + N ++ +Y   G  + +  VF+ + +KD++SW S++
Sbjct: 376 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLM 435

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           +S+V++G + +AL +   M       + +T  SAL+A  S     KG+ L+G ++  G  
Sbjct: 436 ASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLF 495

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
               + ++LV MY + G +  + +V   +  +D++ W ++I     +     A+  F  +
Sbjct: 496 DNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTL 555

Query: 555 EAESFAPDHITFLALLYACSHSG-LINEGKKF 585
             E  + ++IT +++L AC   G L+  GK  
Sbjct: 556 RVEGVSANYITVVSVLSACLVPGDLLERGKPL 587


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 297/838 (35%), Positives = 483/838 (57%), Gaps = 6/838 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YG  G V  + ++F+++  R V +W +++  Y   GEP  V++ Y  MR  G+  +  +
Sbjct: 103 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 162

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +C +LKD   G +I G V+K G +S   + NSL++M     +   A  +FD+M 
Sbjct: 163 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 222

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D + WNSI +AY+ +G   E+  +F  M+R     N+ T    L        +  G 
Sbjct: 223 ER-DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 281

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   VK G +  V V N L+ MYA  G+  EA  V  Q+  KD +SWNS++  FV + 
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 341

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+     +  +G+  + V   +A++A         G+ LH   +  G   +  IGN
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 401

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MY K   ++   RV  QM  +D ++W  +I GYA++    KAL  F+T+++EG+ +
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 461

Query: 361 DVMIIGSVLMAC--SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
           + + + SVL AC   G   + + K +H YI+  G  SD  + N+++ +Y KCG++  S++
Sbjct: 462 NYITVVSVLSACLLPG-DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  ++++++++W +M+++  H+G   E L+L   M    V  D  +    LSAA+ L++
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L++G++L+G  ++ GF  +  + ++  DMY++CG +    K+      + L  W  +I+A
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 640

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G HG  +     F++M      P H+TF++LL ACSH GL+++G  + +++  D+ L+P
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 700

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EH  C++DLLGR+  L EA  F+  M ++P   VW +LL +C++H N + G   A+ L
Sbjct: 701 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 760

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
            +L+P +   YVL SN+FA + +W+DVE VR +M    +KK    SW+++ +K+ SF   
Sbjct: 761 SKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG 820

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D++H ++ EIY KL +I +KL +E GYVA T   L + +EE+K   L+ HSERLA+AY +
Sbjct: 821 DRTHPQTMEIYAKLEDI-KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 879

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + + EGS +RI KNLR+C DCHS  K VSR+ GR +V+RD  RFHHFE G+CSC DYW
Sbjct: 880 MSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 191/681 (28%), Positives = 326/681 (47%), Gaps = 45/681 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G V  A  LFD +  R   +WN M+   V  G  L  +E + +M  LGI   +F 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 61  FPCVIKAC----AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
              ++ AC    +M ++   G ++HG V K G  S  ++  +++ +Y        +R++F
Sbjct: 61  IASLVTACGRSGSMFRE---GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           + M ++ +VV W S++  YS  G+  E + +++ M+  G+  N  +    + +C     E
Sbjct: 118 EEMPDR-NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 176

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +LG +I    VKSG   ++ V N+LI+M    G +  A  +  Q+  +D++SWNS+   +
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            QN    ++ + F  ++    + +       +S  G + +   G+ +H   +K GF S +
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + NTL+ MYA          VF QM  +D ISW +++A +  +   L AL L  ++   
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
           G   + +   S L AC       + + +HG ++  GL  + +I NA+V +YGK G +  S
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 416

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA-SS 474
           R V   +  +DVV+W ++I  Y  +   ++AL  F  M    V S+ IT+VS LSA    
Sbjct: 417 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 476

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
             +L++GK L+ +I+  GF  +  V +SL+ MYA+CG L  +  +FN +  +++I W +M
Sbjct: 477 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAM 536

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-------- 586
           + AN  HG G+  + L  KM +   + D  +F   L A +   ++ EG++          
Sbjct: 537 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 596

Query: 587 ------------------EIMRCDYQLDP-----WPEHYACLVDLLGRANHLEE---AYQ 620
                             EI      L P      P  +  L+  LGR  + EE    + 
Sbjct: 597 EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS-WNILISALGRHGYFEEVCATFH 655

Query: 621 FVRSMQIEPTAEVWCALLGAC 641
            +  M I+P    + +LL AC
Sbjct: 656 EMLEMGIKPGHVTFVSLLTAC 676


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/758 (39%), Positives = 450/758 (59%), Gaps = 4/758 (0%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           IH  ++K    +  F+   L+ +Y+       AR +FD+    E  V  N++I+ +  + 
Sbjct: 66  IHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVC-NAMIAGFLRNQ 124

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
           Q +E   LFR M    +  N+YT + AL+AC D   + +GMEI  A V+ G +L +YV +
Sbjct: 125 QHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGS 184

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP 259
           +++    + G + +A  V   +  KD V WNS++ G+VQ  L+ +++Q F E+ G G +P
Sbjct: 185 SMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRP 244

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
             V   N + A G+ G    G   H+Y +  G  +D+ +  +L+DMY+          VF
Sbjct: 245 SPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVF 304

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
             M ++  ISW  +I+GY QN    ++  LFR +   G   D   + S++  CS    + 
Sbjct: 305 DSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLE 364

Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             + +H  IIRK L S LV+  AIVD+Y KCG I  +  VF  +  K+V++WT+M+    
Sbjct: 365 NGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLS 424

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NG A +AL+LF  M E  V ++S+TLVS +   + L  L KG+ ++   IR G+  +  
Sbjct: 425 QNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAV 484

Query: 499 VASSLVDMYARCGALDIANKVFNC-VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
           + S+L+DMYA+CG +  A K+FN     KD+IL  SMI   G+HG G+ A+ ++ +M  E
Sbjct: 485 ITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEE 544

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              P+  TF++LL ACSHSGL+ EGK     M  D+ + P  +HYACLVDL  RA  LEE
Sbjct: 545 RLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEE 604

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           A + V+ M  +P+ +V  ALL  CR H N  +G  +A +L+ LD  N G YV++SN++A 
Sbjct: 605 ADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAE 664

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           +RKW+ V  +R  MR  G+KK PG S IE+GNK+++F A D SH    +IY+ L  +  +
Sbjct: 665 ARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLE 724

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVD 797
           +E E GY+  T  VL +V E  KV++L+GHSERLAIA+G+L +  GSLI+ITKNLRVCVD
Sbjct: 725 VEAE-GYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVD 783

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CH+  K +S++  RE++VRDANRFHHF  G CSC D+W
Sbjct: 784 CHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 272/522 (52%), Gaps = 4/522 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   G +  A  +FD+ S       NAM+  ++ N + + V   +  M    I ++++T
Sbjct: 88  VYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYT 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               +KAC  L D + G +I    ++ G+    ++ +S+V    K      A+++FD M 
Sbjct: 148 CMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMP 207

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK DVV WNSII  Y   G   E++ +F EM   GL  +  T    L+AC  S  + +GM
Sbjct: 208 EK-DVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGM 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             H+  +  G    V+V  +L+ MY+  G    AA V   + ++  +SWN+M++G+VQN 
Sbjct: 267 CAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNG 326

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +  ++   FR L  +G   D    V+ +    +  +L NG+ LH+  I++   S L +  
Sbjct: 327 MIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLST 386

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++DMY+KC  +     VF +M  ++ I+WT ++ G +QN     AL+LF  +Q E + A
Sbjct: 387 AIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAA 446

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           + + + S++  C+ L  +++ + +H + IR G + D VI +A++D+Y KCG I  +  +F
Sbjct: 447 NSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLF 506

Query: 420 ES-IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
            +    KDV+   SMI  Y  +G    AL ++  M E  ++ +  T VS L+A S   ++
Sbjct: 507 NNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLV 566

Query: 479 KKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKV 519
           ++GK L   + R      +    + LVD+++R G L+ A+++
Sbjct: 567 EEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADEL 608



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 2/237 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A  +F ++ ++ V TW AML     NG     L+ + +M+   ++ ++ T
Sbjct: 391 MYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVT 450

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++  CA L  L  G  +H   ++ GY     I ++L+ MYAKC     A +LF+   
Sbjct: 451 LVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEF 510

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             +DV+L NS+I  Y   G    ALG++  M    L  N  TFV+ L AC  S     G 
Sbjct: 511 HLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGK 570

Query: 181 EI-HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
            + H+         Q      L+ +++R G++ EA  ++ Q+  + S     ++L+G
Sbjct: 571 ALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSG 627



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 146/309 (47%), Gaps = 1/309 (0%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            L++ K +HA  IK    ++  +   L+ +Y+    + +   VF Q +  +      +IA
Sbjct: 59  TLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIA 118

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
           G+ +N  H++   LFR +    ++ +       L AC+ L       EI    +R+G   
Sbjct: 119 GFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHL 178

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
            L + +++V+   K G +  ++ VF+ +  KDVV W S+I  YV  GL  E++++F  M 
Sbjct: 179 HLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMI 238

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              +    +T+ + L A     + K G   + +++  G   +  V +SLVDMY+  G   
Sbjct: 239 GGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTG 298

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A  VF+ + ++ LI W +MI+    +G    +  LF ++       D  T ++L+  CS
Sbjct: 299 SAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCS 358

Query: 575 HSGLINEGK 583
            +  +  G+
Sbjct: 359 QTSDLENGR 367


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 301/791 (38%), Positives = 469/791 (59%), Gaps = 56/791 (7%)

Query: 100 VAMYAKCYDFRKARQLFDRMGEKEDVVLW-NSIISAYSASGQCLEALGLFREMQRVGLVT 158
           V  Y +C    +A  L  R+      V W N++I      G   + LG + +MQR+G + 
Sbjct: 66  VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           + YTF   L+AC +      G  +HA    +G    V++ N+++AMY RCG + +A  + 
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185

Query: 219 YQ-LENK--DSVSWNSMLTGFVQNDLYCKAMQF-FRELQGAGQK--PDQVCTVNAVSASG 272
            + LE K  D VSWNS+L  +VQ      A++  FR       K  PD +  VN + A  
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF------------- 319
            +  L +GK++H ++++ G V D+ +GN L+ MYAKC  +N   +VF             
Sbjct: 246 SVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNA 305

Query: 320 -----------------YQMTAQ-----DFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
                            ++M  +     D I+W+ +IAGYAQ     +AL++FR +QL G
Sbjct: 306 MVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYG 365

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS--------DLVILNAIVDVYGKC 409
           L+ +V+ + S+L  C+ +  +   K+ H Y+I+  L+        DL++LN ++D+Y KC
Sbjct: 366 LEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKC 425

Query: 410 GNIDYSRNVFESIESKD--VVSWTSMISSYVHNGLANEALELF--YLMNEANVESDSITL 465
            +   +R++F+SIE KD  VV+WT MI  Y  +G AN+AL+LF      + +++ ++ TL
Sbjct: 426 KSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTL 485

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEG-SVASSLVDMYARCGALDIANKVFNCVQ 524
             AL A + L  L+ G++L+ + +R     E   V + L+DMY++ G +D A  VF+ ++
Sbjct: 486 SCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMK 545

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            ++++ WTS++   G+HGRG+ A+ LF +M+   FA D ITFL +LYACSHSG++++G  
Sbjct: 546 LRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMI 605

Query: 585 FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
           +   M   + + P  EHYAC+VDLLGRA  L EA + +++M +EPTA VW ALL A R+H
Sbjct: 606 YFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIH 665

Query: 645 SNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSW 704
           +N ELGE  A KL EL   N G+Y L+SN++A +R+WKDV ++R  M+ +G++K PG SW
Sbjct: 666 ANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSW 725

Query: 705 IEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQML 764
           I+      +F   D+SH ES++IY  L ++ +++ ++ GYV QT F LH+V++EEK  +L
Sbjct: 726 IQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRI-KDMGYVPQTSFALHDVDDEEKGDLL 784

Query: 765 YGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHF 824
           + HSE+LA+AYG+L +  G  IRI KNLR+C DCHS    +S +   E+V+RD++RFHHF
Sbjct: 785 FEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHF 844

Query: 825 EAGVCSCGDYW 835
           + G CSC  YW
Sbjct: 845 KKGSCSCRSYW 855



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 203/635 (31%), Positives = 313/635 (49%), Gaps = 70/635 (11%)

Query: 2   YGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           Y +CG+  +A  L  ++  S  TVF WNA++   V  G     L  Y +M+ LG   D +
Sbjct: 69  YIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHY 128

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP V+KAC  +  L  GA +H +V   G  S  FI NS+VAMY +C     A Q+FD +
Sbjct: 129 TFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV 188

Query: 120 GEK--EDVVLWNSIISAYSASGQCLEALGLFREMQR---VGLVTNAYTFVAALQACEDSS 174
            E+  ED+V WNSI++AY   GQ   AL +   M     + L  +A T V  L AC    
Sbjct: 189 LERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVF 248

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G ++H  +V++G    V+V NAL++MYA+C KM EA  V   ++ KD VSWN+M+T
Sbjct: 249 ALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVT 308

Query: 235 GFVQNDLY-----------------------------------CKAMQFFRELQGAGQKP 259
           G+ Q   +                                    +A+  FR++Q  G +P
Sbjct: 309 GYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEP 368

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-------VSDLQIGNTLMDMYAKCCCV 312
           + V   + +S    +G LL GK+ HAY IK            DL + N L+DMYAKC   
Sbjct: 369 NVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSY 428

Query: 313 NYMGRVFYQMTAQD--FISWTTIIAGYAQNNCHLKALELFRTV--QLEGLDADVMIIGSV 368
                +F  +  +D   ++WT +I GYAQ+     AL+LF  +  Q   L  +   +   
Sbjct: 429 RVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCA 488

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLSD--LVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           LMAC+ L  +   +++H Y +R       L + N ++D+Y K G+ID +R VF++++ ++
Sbjct: 489 LMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRN 548

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG----- 481
           VVSWTS+++ Y  +G   EAL LF  M +     D IT +  L A S   ++ +G     
Sbjct: 549 VVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFH 608

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMINANGL 540
             + GF I  G        + +VD+  R G L+ A ++  N       ++W ++++A+ +
Sbjct: 609 DMVKGFGITPG----AEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRI 664

Query: 541 HGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           H     G+ A     ++ AE+      T L+ LYA
Sbjct: 665 HANIELGEYAASKLTELGAEN--DGSYTLLSNLYA 697



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 162/534 (30%), Positives = 257/534 (48%), Gaps = 70/534 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTV---FTWNAMLGAYVSNGEPLRVLETYSRM---RVLGI 54
           MYG+CG++ DA Q+FD+V +R +    +WN++L AYV  G+    L    RM     L +
Sbjct: 171 MYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKL 230

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
             DA T   ++ ACA +  L  G ++HG  ++ G     F+ N+LV+MYAKC    +A +
Sbjct: 231 RPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANK 290

Query: 115 LFDRMGEKE----------------------------------DVVLWNSIISAYSASGQ 140
           +F+ + +K+                                  DV+ W+++I+ Y+  G 
Sbjct: 291 VFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGH 350

Query: 141 CLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ------ 194
             EAL +FR+MQ  GL  N  T  + L  C        G + HA  +K+  NL       
Sbjct: 351 GFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKED 410

Query: 195 -VYVANALIAMYARCGKMTEAAGVLYQLENKDS--VSWNSMLTGFVQNDLYCKAMQFFRE 251
            + V N LI MYA+C     A  +   +E KD   V+W  M+ G+ Q+     A++ F +
Sbjct: 411 DLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQ 470

Query: 252 L--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD-LQIGNTLMDMYAK 308
           +  Q    KP+      A+ A  RLG L  G++LHAYA++    S+ L +GN L+DMY+K
Sbjct: 471 IFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSK 530

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
              ++    VF  M  ++ +SWT+++ GY  +    +AL LF  +Q  G   D +    V
Sbjct: 531 SGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVV 590

Query: 369 LMACSGLKCMSQ-----TKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE--S 421
           L ACS    + Q        + G+ I  G      +   VD+ G+ G ++ +  + +  S
Sbjct: 591 LYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACM---VDLLGRAGRLNEAMELIKNMS 647

Query: 422 IESKDVVSWTSMIS-SYVHNGLANEALELFYL--MNEANVESD-SITLVSALSA 471
           +E   VV W +++S S +H   AN  L  +    + E   E+D S TL+S L A
Sbjct: 648 MEPTAVV-WVALLSASRIH---ANIELGEYAASKLTELGAENDGSYTLLSNLYA 697



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 13/226 (5%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI--ES 424
           S+L  C   K +   K  H  I   G +++   +  V  Y +CG    + ++ + +    
Sbjct: 35  SLLRQC---KTLINAKLAHQQIFVHGFTEM--FSYAVGAYIECGASAEAVSLLQRLIPSH 89

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
             V  W ++I   V  GL ++ L  +  M       D  T    L A   +  L+ G  +
Sbjct: 90  STVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASV 149

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV---QTKDLILWTSMINANGLH 541
           +  +   G      + +S+V MY RCGALD A+++F+ V   + +D++ W S++ A    
Sbjct: 150 HAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQG 209

Query: 542 GRGKVAIDLFYKMEAE---SFAPDHITFLALLYACSHSGLINEGKK 584
           G+ + A+ + ++M         PD IT + +L AC+    +  GK+
Sbjct: 210 GQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQ 255


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 280/773 (36%), Positives = 466/773 (60%), Gaps = 7/773 (0%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++ C  +K+L    +   L++K G  S       LV+++ K     +A ++F  + +K 
Sbjct: 83  LLELCTSMKELH---QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKI 139

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D  L+++++  Y+ +    +A+  F  M+  G+    Y F   L+ C D++    G EIH
Sbjct: 140 DE-LYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIH 198

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              + +G    V+    ++ MYA+C  + EA  +  ++  +D V WN++++G+ QN    
Sbjct: 199 CQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGK 258

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
            A++    +Q  G++PD +  V+ + A   +G+L  G+ +H Y+++ GF S + +   L+
Sbjct: 259 TALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALV 318

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMY+KC  V     +F +MT +  +SW ++I GY QN     A+E+F+ +  E ++   +
Sbjct: 319 DMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNV 378

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            +   L AC+ L  + Q + +H  + +  L SD+ ++N+++ +Y KC  +D +  +FE++
Sbjct: 379 TVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENL 438

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
           + K +VSW +MI  Y  NG  NEA++ F  M   N++ DS T+VS + A + LS+L + K
Sbjct: 439 QHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAK 498

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
            ++G +IR   +    VA++LVDMYA+CGA+  A K+F+ +  + +  W +MI+  G HG
Sbjct: 499 WIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHG 558

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
            GK A++LF KM+ E   P+ +TFL +L ACSHSGL+ EG ++   M+ DY L+P  +HY
Sbjct: 559 LGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHY 618

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
             +VDLLGRAN L EA+ F++ M IEP   V+ A+LGACR+H N ELGE  A ++ +LDP
Sbjct: 619 GAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDP 678

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
            + G +VL++N++A +  W  V +VR  M   G++KTPG S +E+ N++H+F +   SH 
Sbjct: 679 DDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHP 738

Query: 723 ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE 782
           ++ +IY  L  +  ++ +  GY+  T  V H+VE+  K Q+L  HSE+LAIA+ +L ++ 
Sbjct: 739 QAKKIYAFLETLGNRI-KAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSP 796

Query: 783 GSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G+ I + KNLRVC DCH+  K +S +  RE++VRD  RFHHF+ G CSCGDYW
Sbjct: 797 GTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 214/431 (49%), Gaps = 3/431 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  V +A ++FD++ +R +  WN ++  Y  NG     LE   RM+  G   D+ T
Sbjct: 219 MYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSIT 278

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A A +  L  G  IHG  ++ G++S   +  +LV MY+KC     AR +FDRM 
Sbjct: 279 IVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMT 338

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  VV WNS+I  Y  +G    A+ +F++M    +     T + AL AC D      G 
Sbjct: 339 GKT-VVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGR 397

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    +      V V N+LI+MY++C ++  AA +   L++K  VSWN+M+ G+ QN 
Sbjct: 398 FVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNG 457

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+ +F ++Q    KPD    V+ + A   L  L   K +H   I+     ++ +  
Sbjct: 458 RINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVAT 517

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  V+   ++F  M  +   +W  +I GY  +     ALELF  ++ E +  
Sbjct: 518 ALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKP 577

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVI-LNAIVDVYGKCGNIDYSRNV 418
           + +    VL ACS    + +  +  G + +  GL   +    A+VD+ G+   ++ + + 
Sbjct: 578 NEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDF 637

Query: 419 FESIESKDVVS 429
            + +  +  +S
Sbjct: 638 IQKMPIEPAIS 648



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 182/360 (50%), Gaps = 19/360 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV  A  +FD+++ +TV +WN+M+  YV NG+P   +E + +M    + +   T
Sbjct: 320 MYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVT 379

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + ACA L D++ G  +H L+ +    S   ++NSL++MY+KC     A ++F+ + 
Sbjct: 380 VMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQ 439

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  +V WN++I  Y+ +G+  EA+  F +MQ   +  +++T V+ + A  + S      
Sbjct: 440 HKT-LVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAK 498

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +++  +  V+VA AL+ MYA+CG +  A  +   ++ +   +WN+M+ G+  + 
Sbjct: 499 WIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHG 558

Query: 241 LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRL--GNLLNGKELHAYAIKQGFVSD 295
           L   A++ F +++    KP++V   C ++A S SG +  G    G     Y ++      
Sbjct: 559 LGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPA---- 614

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
                  MD Y     V+ +GR      A DFI    I    +     L A  + + V+L
Sbjct: 615 -------MDHYG--AMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVEL 665


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 300/789 (38%), Positives = 476/789 (60%), Gaps = 21/789 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDS-----TDFIV--NSLVAMYAKCYDFRKARQLF 116
           ++++C   K L  G  IH  +LKC + +     T+F V    LV +Y  C + + AR +F
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74

Query: 117 DRMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           D+M  + ++VVLWN +I AY+ +G   EA+ L+ +M   G+  N +TF   L+AC     
Sbjct: 75  DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
            + G EIH    +      VYV+ AL+  YA+CG + +A  V  ++  +D V+WNSM++G
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISG 194

Query: 236 F-VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
           F +    Y +  +   ++Q     P+    V  + A  ++ +L +GKE+H + +++GFV 
Sbjct: 195 FSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVG 253

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQM-TAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           D+ +G  ++D+Y KC C++Y  R+F  M   ++ ++W+ ++  Y   +   +ALELF   
Sbjct: 254 DVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELF--C 311

Query: 354 QLEGLDADVMIIGSVLMA-----CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYG 407
           QL  L  DV+++ +V +A     C+ L  +S    +H Y I+ G   DL++ N ++ +Y 
Sbjct: 312 QLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYA 371

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KCG I+ +   F  ++ +D VS+T++IS YV NG + E L +F  M  + +  +  TL S
Sbjct: 372 KCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLAS 431

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            L A + L+ L  G   + + I  GF  +  + ++L+DMYA+CG +D A KVF+ +  + 
Sbjct: 432 VLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRG 491

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           ++ W +MI A G+HG G  A+ LF  M++E   PD +TF+ L+ ACSHSGL+ EGK +  
Sbjct: 492 IVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFN 551

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
            M  D+ + P  EHYAC+VDLL RA   +E + F+  M +EP   VW ALL ACRV+ N 
Sbjct: 552 AMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNV 611

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           ELGE V+KK+ +L P + GN+VL+SN+++A  +W D  QVR   +  G +K+PG SWIEI
Sbjct: 612 ELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEI 671

Query: 708 GNKIHSFIARD-KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
              +H+F+    +SH +  +I  KL E+  +++R  GY A++ +V  +VEEEEK ++L  
Sbjct: 672 SGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRL-GYQAESSYVFQDVEEEEKERVLLY 730

Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
           HSE+LAIA+G+L  +    I +TKNLRVC DCH+  K +S +  R++ VRDA+RFHHF+ 
Sbjct: 731 HSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKD 790

Query: 827 GVCSCGDYW 835
           G+C+CGD+W
Sbjct: 791 GICNCGDFW 799



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 180/550 (32%), Positives = 287/550 (52%), Gaps = 18/550 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRT--VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           +Y  C  +  A  +FDK+  R   V  WN ++ AY  NG     ++ Y +M   GI+ + 
Sbjct: 60  LYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNR 119

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           FTFP V+KAC+ LK+   G +IH  + +   +S  ++  +LV  YAKC     A+++FD+
Sbjct: 120 FTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDK 179

Query: 119 MGEKEDVVLWNSIISAYSA-SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           M  K DVV WNS+IS +S   G   E   L  +MQ   +  N+ T V  L A    +   
Sbjct: 180 M-HKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLR 237

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGF 236
            G EIH   V+ G    V V   ++ +Y +C  +  A  +   +   K+ V+W++M+  +
Sbjct: 238 HGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAY 297

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS------GRLGNLLNGKELHAYAIKQ 290
           V  D   +A++ F +L       D V  ++AV+ +        L +L  G  LH YAIK 
Sbjct: 298 VVCDFMREALELFCQLL---MLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKS 354

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           GFV DL +GNTL+ MYAKC  +N   R F +M  +D +S+T II+GY QN    + L +F
Sbjct: 355 GFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMF 414

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
             +QL G++ +   + SVL AC+ L  +      H Y I  G + D +I NA++D+Y KC
Sbjct: 415 LEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKC 474

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G ID +R VF+ +  + +VSW +MI +Y  +G+  EAL LF  M    ++ D +T +  +
Sbjct: 475 GKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLI 534

Query: 470 SAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKD 527
           SA S   ++ +GK   N      G        + +VD+ +R G   ++ + +       D
Sbjct: 535 SACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPD 594

Query: 528 LILWTSMINA 537
           + +W ++++A
Sbjct: 595 VRVWGALLSA 604


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 304/839 (36%), Positives = 469/839 (55%), Gaps = 30/839 (3%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y K G V  A  LFDK+ +R    WN ML AYV N      L  +S     G   D   
Sbjct: 761  IYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSN 820

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              CVI       D+    K H   +K              A   K + F +   +F    
Sbjct: 821  LHCVIGGVN--SDVSNNRKRHAEQVK--------------AYAMKMFPFDQGSNIF---- 860

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
                   WN  ++ +  +GQ + A+  F+ + R  +  ++ T V  L A   +    LG 
Sbjct: 861  ------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGE 914

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +IHA  +KS     V V+N+L+ MY++ G +  A          D +SWN+M++ + QN+
Sbjct: 915  QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSA--SGRLGNLLN-GKELHAYAIKQGFVSDLQ 297
            L  +A+  FR+L   G KPDQ    + + A  +G  G     G ++H YAIK G ++D  
Sbjct: 975  LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034

Query: 298  IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
            +   L+D+Y+K   ++    + +     D  SW  I+ GY ++N   KALE F  +   G
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMG 1094

Query: 358  LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
            +  D + + + + A   L  + Q K+I  Y I+ G + DL + + ++D+Y KCG++  + 
Sbjct: 1095 IPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL 1154

Query: 417  NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
             +F  I   D V+WT+MIS Y+ NG  + AL +++LM  + V+ D  T  + + A+S L+
Sbjct: 1155 ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLT 1214

Query: 477  ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
             L++GK+++  +++  ++L+  V +SLVDMY +CG++  A +VF  +  + ++ W +M+ 
Sbjct: 1215 ALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLL 1274

Query: 537  ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
                HG    A++LF  M++    PD +TF+ +L ACSHSGL +E  K+ + M   Y + 
Sbjct: 1275 GLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGIT 1334

Query: 597  PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
            P  EHY+CLVD LGRA  ++EA   + SM  + +A ++ ALLGACR   + E  + VA K
Sbjct: 1335 PEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADK 1394

Query: 657  LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
            LL LDP +   YVL+SN++AASR+W DV   R  M+   +KK PG SWI++ NK+H F+ 
Sbjct: 1395 LLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVV 1454

Query: 717  RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
             D+SH ++  IY+K+ ++ +++  EG YV  T F L +VEEEEK + LY HSE+LAIA+G
Sbjct: 1455 DDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFG 1514

Query: 777  VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            ++ +   + IR+ KNLRVC DCHS  K +S+L  RE+V+RDANRFHHF  G CSCGDYW
Sbjct: 1515 LISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 190/650 (29%), Positives = 314/650 (48%), Gaps = 43/650 (6%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEP-----LRVLETYSRMRVLGIS 55
            MY KCGS+  A Q+FDK S R + TWN++L AY    +      L     +  +R  G S
Sbjct: 655  MYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFS 714

Query: 56   VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            +   T   ++K C +   +     +HG  +K G++   F+  +LV +Y K     +AR L
Sbjct: 715  ITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLL 774

Query: 116  FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            FD+M E+ D VLWN ++ AY  +    EAL  F    R G   +               F
Sbjct: 775  FDKMPER-DAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPD---------------F 818

Query: 176  ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              L   I         N + + A  + A   +     + + +          +WN  LT 
Sbjct: 819  SNLHCVIGGVNSDVSNNRKRH-AEQVKAYAMKMFPFDQGSNIF---------AWNKKLTE 868

Query: 236  FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            F+       A+  F+ L  +    D V  V  +SA+    +L  G+++HA  IK  F   
Sbjct: 869  FLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPV 928

Query: 296  LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            + + N+LM+MY+K   V    + F      D ISW T+I+ YAQNN  ++A+  FR +  
Sbjct: 929  VPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988

Query: 356  EGLDADVMIIGSVLMACSG---LKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGN 411
            +GL  D   + SVL ACS     +  +   ++H Y I+ G ++D  +  A++D+Y K G 
Sbjct: 989  DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048

Query: 412  IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
            +D +  +       D+ SW +++  Y+ +  + +ALE F LM+E  +  D ITL +A+ A
Sbjct: 1049 MDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108

Query: 472  ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            +  L  LK+GK++  + I+ GFN +  V+S ++DMY +CG +  A ++F  +   D + W
Sbjct: 1109 SGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAW 1168

Query: 532  TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMR 590
            T+MI+    +G    A+ +++ M      PD  TF  L+ A S    + +GK+    +++
Sbjct: 1169 TTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVK 1228

Query: 591  CDYQLDPWPEHY--ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
             DY LD    H+    LVD+  +   +++AY+  R M +      W A+L
Sbjct: 1229 LDYSLD----HFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVV-FWNAML 1273



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 248/534 (46%), Gaps = 47/534 (8%)

Query: 66   KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
            ++   + DL  G + H  ++  G     ++ N+L+ MY+KC     ARQ+FD+  ++ D+
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR-DL 677

Query: 126  VLWNSIISAY-----SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            V WNSI++AY     S+    LE   LF  ++  G      T    L+ C  S F  +  
Sbjct: 678  VTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSE 737

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             +H   VK G  L ++V+ AL+ +Y + G + +A  +  ++  +D+V WN ML  +V+N 
Sbjct: 738  TVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENS 797

Query: 241  LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
               +A++FF     +G  PD     C +  V++     ++ N ++ HA  +K        
Sbjct: 798  FQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNS-----DVSNNRKRHAEQVKA------- 845

Query: 298  IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
                            Y  ++F      +  +W   +  +      + A++ F+T+    
Sbjct: 846  ----------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889

Query: 358  LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSR 416
            +  D + +  +L A  G   +   ++IH  +I+   + +V + N+++++Y K G +  + 
Sbjct: 890  IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 417  NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
              F +    D++SW +MISSY  N L  EA+  F  +    ++ D  TL S L A S+  
Sbjct: 950  KTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGD 1009

Query: 477  ---ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
                   G +++ + I+ G   +  V+++L+D+Y++ G +D A  + +     DL  W +
Sbjct: 1010 EGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNA 1069

Query: 534  MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG-LIN--EGKK 584
            ++       + + A++ F  M       D IT   L  A   SG LIN  +GK+
Sbjct: 1070 IMFGYIKSNKSRKALEHFSLMHEMGIPIDEIT---LATAIKASGCLINLKQGKQ 1120



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 8/224 (3%)

Query: 382 KEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
           K  H  I+  G L D  + N ++ +Y KCG++  +R VF+    +D+V+W S++++Y   
Sbjct: 631 KRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQF 690

Query: 441 GLAN-----EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
             ++     E   LF L+ E       +TL   L        ++  + ++G+ ++ GF L
Sbjct: 691 ADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFEL 750

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  V+ +LV++Y + G +  A  +F+ +  +D +LW  M+ A   +     A+  F    
Sbjct: 751 DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFH 810

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
              F PD  + L  +    +S + N  K+  E ++  Y +  +P
Sbjct: 811 RSGFXPD-FSNLHCVIGGVNSDVSNNRKRHAEQVKA-YAMKMFP 852


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 291/820 (35%), Positives = 471/820 (57%), Gaps = 39/820 (4%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G+ V++ T+ CVI+ CA  +  + G  +H  + + G +   ++ NSL+  Y+K  D   A
Sbjct: 51  GLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASA 110

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
            Q+F RM  + DVV W+S+I+AY+ +    +A   F  M    +  N  TF++ L+AC +
Sbjct: 111 EQVFRRMTLR-DVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNN 169

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
            S    G +IH      G    V VA ALI MY++CG+++ A  V +++  ++ VSW ++
Sbjct: 170 YSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAI 229

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           +    Q+    +A + + ++  AG  P+ V  V+ +++      L  G+ +H++  ++G 
Sbjct: 230 IQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL 289

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-----AL 347
            +D+ + N L+ MY KC  V     +F +M+ +D ISW+ +IAGYAQ+    K       
Sbjct: 290 ETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVF 349

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVY 406
           +L   ++ EG+  + +   S+L AC+    + Q ++IH  + + G   D  +  AI ++Y
Sbjct: 350 QLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMY 409

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTS-------------------------------MIS 435
            KCG+I  +  VF  + +K+VV+WTS                               MI+
Sbjct: 410 AKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIA 469

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  NG   +  EL   M     + D +T+++ L A  +L+ L++GK ++   ++ G   
Sbjct: 470 GYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLES 529

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  VA+SL+ MY++CG +  A  VF+ +  +D + W +M+   G HG G  A+DLF +M 
Sbjct: 530 DTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRML 589

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
            E  +P+ IT  A++ ACS +GL+ EG++   +M+ D+++ P  +HY C+VDLLGRA  L
Sbjct: 590 KERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRL 649

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           +EA +F++SM  EP   VW ALLGAC+ H+N +L E  A  +LEL+P     Y+ +SN++
Sbjct: 650 QEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIY 709

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           A + +W D  +VR  M   GLKK  G S IEI  +IH+F+A D +H E D I+ +L  +T
Sbjct: 710 AQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLT 769

Query: 736 EKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVC 795
           +++ +E GY    +FVLH+V++ +K + L  HSE+LAIAYG+LK+  G+ IRI KNLRVC
Sbjct: 770 KEM-KEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVC 828

Query: 796 VDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            DCH+  K +S++  RE+V RDANRFH+F  G CSCGD+W
Sbjct: 829 GDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 180/630 (28%), Positives = 320/630 (50%), Gaps = 47/630 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K   V  AEQ+F +++ R V TW++M+ AY  N  P +  +T+ RM    I  +  TF
Sbjct: 101 YSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITF 160

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++KAC     L+ G KIH +V   G ++   +  +L+ MY+KC +   A ++F +M E
Sbjct: 161 LSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTE 220

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + +VV W +II A +   +  EA  L+ +M + G+  NA TFV+ L +C        G  
Sbjct: 221 R-NVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRR 279

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH+   + G    + VANALI MY +C  + EA  +  ++  +D +SW++M+ G+ Q+  
Sbjct: 280 IHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGY 339

Query: 242 YCK-----AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             K       Q    ++  G  P++V  ++ + A    G L  G+++HA   K GF  D 
Sbjct: 340 KDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDR 399

Query: 297 QIGNTLMDMYAKCCCV-------------------------------NYMGRVFYQMTAQ 325
            +   + +MYAKC  +                               +   +VF +M  +
Sbjct: 400 SLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTR 459

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           + +SW  +IAGYAQN   +K  EL  +++ EG   D + + ++L AC  L  + + K +H
Sbjct: 460 NVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVH 519

Query: 386 GYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
              ++ GL SD V+  +++ +Y KCG +  +R VF+ + ++D V+W +M++ Y  +G   
Sbjct: 520 AEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGL 579

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SS 502
           EA++LF  M +  V  + ITL + +SA S   ++++G+E+   ++++ F +         
Sbjct: 580 EAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFR-MMQEDFKMTPRKQHYGC 638

Query: 503 LVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYK-MEAE-SF 559
           +VD+  R G L  A +    +  + D+ +W +++ A   H   ++A    +  +E E S+
Sbjct: 639 MVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSY 698

Query: 560 APDHITFLALLYACSHSGLINEGKKFLEIM 589
           A  +IT L+ +YA   +G  ++  K   +M
Sbjct: 699 ASVYIT-LSNIYA--QAGRWDDSTKVRRVM 725



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 237/479 (49%), Gaps = 48/479 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F K+++R V +W A++ A   + +     E Y +M   GIS +A T
Sbjct: 201 MYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVT 260

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ +C   + L+ G +IH  + + G ++   + N+L+ MY KC   ++AR++FDRM 
Sbjct: 261 FVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMS 320

Query: 121 EKEDVVLWNSIISAYSASG-----QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            K DV+ W+++I+ Y+ SG        E   L   M+R G+  N  TF++ L+AC     
Sbjct: 321 -KRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGA 379

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK----------- 224
              G +IHA   K G  L   +  A+  MYA+CG + EA  V  ++ NK           
Sbjct: 380 LEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSM 439

Query: 225 --------------------DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
                               + VSWN M+ G+ QN    K  +    ++  G +PD+V  
Sbjct: 440 YIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTV 499

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           +  + A G L  L  GK +HA A+K G  SD  +  +L+ MY+KC  V     VF +M+ 
Sbjct: 500 ITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSN 559

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D ++W  ++AGY Q+   L+A++LF+ +  E +  + + + +V+ ACS    + + +E 
Sbjct: 560 RDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGRE- 618

Query: 385 HGYIIRKGLSDLVIL------NAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
              I R    D  +         +VD+ G+ G +  +    +S+    D+  W +++ +
Sbjct: 619 ---IFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGA 674


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 304/839 (36%), Positives = 469/839 (55%), Gaps = 30/839 (3%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y K G V  A  LFDK+ +R    WN ML AYV N      L  +S     G   D   
Sbjct: 761  IYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSN 820

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              CVI       D+    K H   +K              A   K + F +   +F    
Sbjct: 821  LHCVIGGVN--SDVSNNRKRHAEQVK--------------AYAMKMFPFDQGSNIF---- 860

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
                   WN  ++ +  +GQ + A+  F+ + R  +  ++ T V  L A   +    LG 
Sbjct: 861  ------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGE 914

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +IHA  +KS     V V+N+L+ MY++ G +  A          D +SWN+M++ + QN+
Sbjct: 915  QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSA--SGRLGNLLN-GKELHAYAIKQGFVSDLQ 297
            L  +A+  FR+L   G KPDQ    + + A  +G  G     G ++H YAIK G ++D  
Sbjct: 975  LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034

Query: 298  IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
            +   L+D+Y+K   ++    + +     D  SW  I+ GY ++N   KALE F  +   G
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMG 1094

Query: 358  LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
            +  D + + + + A   L  + Q K+I  Y I+ G + DL + + ++D+Y KCG++  + 
Sbjct: 1095 IPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL 1154

Query: 417  NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
             +F  I   D V+WT+MIS Y+ NG  + AL +++LM  + V+ D  T  + + A+S L+
Sbjct: 1155 ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLT 1214

Query: 477  ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
             L++GK+++  +++  ++L+  V +SLVDMY +CG++  A +VF  +  + ++ W +M+ 
Sbjct: 1215 ALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLL 1274

Query: 537  ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
                HG    A++LF  M++    PD +TF+ +L ACSHSGL +E  K+ + M   Y + 
Sbjct: 1275 GLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGIT 1334

Query: 597  PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
            P  EHY+CLVD LGRA  ++EA   + SM  + +A ++ ALLGACR   + E  + VA K
Sbjct: 1335 PEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADK 1394

Query: 657  LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
            LL LDP +   YVL+SN++AASR+W DV   R  M+   +KK PG SWI++ NK+H F+ 
Sbjct: 1395 LLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVV 1454

Query: 717  RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
             D+SH ++  IY+K+ ++ +++  EG YV  T F L +VEEEEK + LY HSE+LAIA+G
Sbjct: 1455 DDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFG 1514

Query: 777  VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            ++ +   + IR+ KNLRVC DCHS  K +S+L  RE+V+RDANRFHHF  G CSCGDYW
Sbjct: 1515 LISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 190/650 (29%), Positives = 314/650 (48%), Gaps = 43/650 (6%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEP-----LRVLETYSRMRVLGIS 55
            MY KCGS+  A Q+FDK S R + TWN++L AY    +      L     +  +R  G S
Sbjct: 655  MYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFS 714

Query: 56   VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            +   T   ++K C +   +     +HG  +K G++   F+  +LV +Y K     +AR L
Sbjct: 715  ITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLL 774

Query: 116  FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            FD+M E+ D VLWN ++ AY  +    EAL  F    R G   +               F
Sbjct: 775  FDKMPER-DAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPD---------------F 818

Query: 176  ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              L   I         N + + A  + A   +     + + +          +WN  LT 
Sbjct: 819  SNLHCVIGGVNSDVSNNRKRH-AEQVKAYAMKMFPFDQGSNIF---------AWNKKLTE 868

Query: 236  FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            F+       A+  F+ L  +    D V  V  +SA+    +L  G+++HA  IK  F   
Sbjct: 869  FLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPV 928

Query: 296  LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            + + N+LM+MY+K   V    + F      D ISW T+I+ YAQNN  ++A+  FR +  
Sbjct: 929  VPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988

Query: 356  EGLDADVMIIGSVLMACSG---LKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGN 411
            +GL  D   + SVL ACS     +  +   ++H Y I+ G ++D  +  A++D+Y K G 
Sbjct: 989  DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048

Query: 412  IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
            +D +  +       D+ SW +++  Y+ +  + +ALE F LM+E  +  D ITL +A+ A
Sbjct: 1049 MDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108

Query: 472  ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            +  L  LK+GK++  + I+ GFN +  V+S ++DMY +CG +  A ++F  +   D + W
Sbjct: 1109 SGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAW 1168

Query: 532  TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMR 590
            T+MI+    +G    A+ +++ M      PD  TF  L+ A S    + +GK+    +++
Sbjct: 1169 TTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVK 1228

Query: 591  CDYQLDPWPEHY--ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
             DY LD    H+    LVD+  +   +++AY+  R M +      W A+L
Sbjct: 1229 LDYSLD----HFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVV-FWNAML 1273



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 248/534 (46%), Gaps = 47/534 (8%)

Query: 66   KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
            ++   + DL  G + H  ++  G     ++ N+L+ MY+KC     ARQ+FD+  ++ D+
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR-DL 677

Query: 126  VLWNSIISAY-----SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            V WNSI++AY     S+    LE   LF  ++  G      T    L+ C  S F  +  
Sbjct: 678  VTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSE 737

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             +H   VK G  L ++V+ AL+ +Y + G + +A  +  ++  +D+V WN ML  +V+N 
Sbjct: 738  TVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENS 797

Query: 241  LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
               +A++FF     +G  PD     C +  V++     ++ N ++ HA  +K        
Sbjct: 798  FQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNS-----DVSNNRKRHAEQVKA------- 845

Query: 298  IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
                            Y  ++F      +  +W   +  +      + A++ F+T+    
Sbjct: 846  ----------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889

Query: 358  LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSR 416
            +  D + +  +L A  G   +   ++IH  +I+   + +V + N+++++Y K G +  + 
Sbjct: 890  IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 417  NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
              F +    D++SW +MISSY  N L  EA+  F  +    ++ D  TL S L A S+  
Sbjct: 950  KTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGD 1009

Query: 477  ---ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
                   G +++ + I+ G   +  V+++L+D+Y++ G +D A  + +     DL  W +
Sbjct: 1010 EGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNA 1069

Query: 534  MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG-LIN--EGKK 584
            ++       + + A++ F  M       D IT   L  A   SG LIN  +GK+
Sbjct: 1070 IMFGYIKSNKSRKALEHFSLMHEMGIPIDEIT---LATAIKASGCLINLKQGKQ 1120



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 8/224 (3%)

Query: 382 KEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
           K  H  I+  G L D  + N ++ +Y KCG++  +R VF+    +D+V+W S++++Y   
Sbjct: 631 KRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQF 690

Query: 441 GLAN-----EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
             ++     E   LF L+ E       +TL   L        ++  + ++G+ ++ GF L
Sbjct: 691 ADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFEL 750

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  V+ +LV++Y + G +  A  +F+ +  +D +LW  M+ A   +     A+  F    
Sbjct: 751 DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFH 810

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
              F PD  + L  +    +S + N  K+  E ++  Y +  +P
Sbjct: 811 RSGFFPD-FSNLHCVIGGVNSDVSNNRKRHAEQVKA-YAMKMFP 852


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 293/837 (35%), Positives = 484/837 (57%), Gaps = 4/837 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRV-LETYSRMRVLGISVDAF 59
           MYGKCG++LDA+ +F++++++ V TWNAMLG Y   G   ++ +E ++RM + G+  +  
Sbjct: 102 MYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVI 161

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  V+ +      L  G  IH  V +  +    F+  +LV  Y KC     AR++FD M
Sbjct: 162 TFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM 221

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             +  V  WNS+ISAYS S +  EA  +F+ MQ+ G   +  TF++ L AC +      G
Sbjct: 222 PCR-SVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHG 280

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +  +  ++   L ++V  ALI MYARC    +AA V  +++  + ++W++++T F  +
Sbjct: 281 KHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADH 340

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+++FR +Q  G  P++V  ++ ++       L     +H    + G      + 
Sbjct: 341 GHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMR 400

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+++Y +C   +    VF Q+   + ISW ++I  Y Q   H  AL+LFRT+Q +G+ 
Sbjct: 401 NALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQ 460

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            D +   ++L AC+        K +H  +   GL    ++  ++V++Y K G +D +  +
Sbjct: 461 PDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVI 520

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
            + ++ + + +W  +I+ Y  +G + EALE +  +    +  D +T +S L+A +S + L
Sbjct: 521 LQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSL 580

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            +GK ++   +  G + +  V ++L +MY++CG+++ A ++F+ +  +  + W  M+ A 
Sbjct: 581 AEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAY 640

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             HG  +  + L  KME E    + ITF+++L +CSH+GLI EG ++   +  D  ++  
Sbjct: 641 AQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVK 700

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY CLVDLLGRA  L+EA +++  M +EP    W +LLGACRV  + + G++ A KLL
Sbjct: 701 TEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLL 760

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           ELDPGN    V++SN+++    WK+  ++R  M    +KK PG S I++ NK+H F  RD
Sbjct: 761 ELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRD 820

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            SH  + EIY K+ E+   + RE GYV  T+ VLH+V+EE+K  +L  HSE+LAIA+G++
Sbjct: 821 TSHPRAAEIYDKVEELCFAM-REAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLI 879

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            + E S + I KNLRVC DCH+  K +S++ GRE+VVRD +RFHHF  G CSC DYW
Sbjct: 880 STPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 194/651 (29%), Positives = 330/651 (50%), Gaps = 7/651 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGS+ DA   F K+  R V +WN M+ AY S       L  +  M + G++ +A T
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +C   ++L  G  +H L L+ G+     +  +L+ MY KC     A+ +F+ M 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 121 EKEDVVLWNSIISAYSASGQCLE-ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           EK +VV WN+++  YS  G C + A+ LF  M   G+  N  TF+  L +  D      G
Sbjct: 121 EK-NVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH+   +S  +L V+V  AL+  Y +CG +T+A  V   +  +   +WNSM++ +  +
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +   +A   F+ +Q  G++ D+V  ++ + A      L +GK +     +  F  DL +G
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG 299

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+ MYA+C       +VF +M   + I+W+ II  +A +    +AL  FR +Q EG+ 
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNV 418
            + +   S+L   +    + +   IH  I   GL D   + NA+V+VYG+C + D +R V
Sbjct: 360 PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTV 419

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +E  +++SW SMI  YV     ++AL+LF  M +  ++ D +  ++ L A +  S  
Sbjct: 420 FDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHG 479

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           +  K ++  +   G      V +SLV+MYA+ G LD+A  +   +  + +  W  +IN  
Sbjct: 480 RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGY 539

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDP 597
            LHGR + A++ + K++ E+   D +TF+++L AC+ S  + EGK      + C    D 
Sbjct: 540 ALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDV 599

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
             ++   L ++  +   +E A +   SM I  +A  W  +L A   H   E
Sbjct: 600 IVKN--ALTNMYSKCGSMENARRIFDSMPIR-SAVSWNGMLQAYAQHGESE 647


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  560 bits (1444), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 312/868 (35%), Positives = 481/868 (55%), Gaps = 90/868 (10%)

Query: 52  LGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG--------------------YDS 91
            G  V    F  ++K C   + ++   +IH  ++ CG                    Y S
Sbjct: 25  FGRDVSPTHFASLLKEC---RSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVS 81

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
              +   +VA Y  C   + A  + +R+      V WN ++  +   G    A+G+   M
Sbjct: 82  PKSLGTGVVASYLACGATKDALSVLERV-TPSPAVWWNLLVREHIKEGHLDRAIGVSCRM 140

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
            R G   + +T   AL+AC +      G  +H     +G    V+V NAL+AMY+RCG +
Sbjct: 141 LRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSL 200

Query: 212 TEAAGVLYQLENK---DSVSWNSMLTGFVQNDLYCKAMQFFREL------QGAGQKPDQV 262
            +A+ V  ++  K   D +SWNS++   V+      A++ F E+      +   ++ D +
Sbjct: 201 EDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDII 260

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
             VN + A   L  L   KE+H+YAI+ G  +D  + N L+D YAKC  +N   +VF  M
Sbjct: 261 SIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVM 320

Query: 323 TAQDFISW-----------------------------------TTIIAGYAQNNCHLKAL 347
             +D +SW                                   + +IAGYAQ  C  +AL
Sbjct: 321 EFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEAL 380

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-------------S 394
           + F+ + L+G + + + I S+L AC+ L  +SQ  EIH Y ++K L              
Sbjct: 381 DAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGE 440

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIE--SKDVVSWTSMISSYVHNGLANEALELFYL 452
           DL++ NA++D+Y KC +   +R++F+SI    ++VV+WT MI  Y   G +N+AL++F  
Sbjct: 441 DLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSE 500

Query: 453 M--NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV---ASSLVDMY 507
           M      V  ++ T+   L A + L+ L+ GK+++ ++ R     E SV   A+ L+DMY
Sbjct: 501 MISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRH-HEYEPSVYFVANCLIDMY 559

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           ++CG +D A  VF+ +  ++ + WTSM++  G+HGRGK A+D+F KM+   F PD I+FL
Sbjct: 560 SKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFL 619

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
            LLYACSHSG++++G  + +IMR DY +    EHYAC++DLL R   L++A++ ++ M +
Sbjct: 620 VLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPM 679

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
           EP+A +W ALL ACRVHSN EL E    KL+ +   N G+Y LISN++A +R+WKDV ++
Sbjct: 680 EPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARI 739

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           R  M+ SG+KK PG SW++      SF   D+SH  S EIY  L  +  ++ +  GYV +
Sbjct: 740 RQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRI-KVMGYVPE 798

Query: 748 TQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSR 807
           T F LH+V++EEK  +L  HSE+LA+AYG+L ++ G  IRITKNLRVC DCHS    +S+
Sbjct: 799 TNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISK 858

Query: 808 LFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +   E++VRD++RFHHF+ G CSCG YW
Sbjct: 859 IVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 188/626 (30%), Positives = 309/626 (49%), Gaps = 71/626 (11%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG+  DA  + ++V+      WN ++  ++  G   R +    RM   G   D FT 
Sbjct: 93  YLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTL 152

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P  +KAC  L    CG  +HGL+   G++S  F+ N+LVAMY++C     A  +FD +  
Sbjct: 153 PYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITR 212

Query: 122 K--EDVVLWNSIISAYSASGQCLEALGLFREMQRV------GLVTNAYTFVAALQACEDS 173
           K  +DV+ WNSI++A+        AL LF EM  +         ++  + V  L AC   
Sbjct: 213 KGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASL 272

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                  EIH+  +++G     +V NALI  YA+CG M +A  V   +E KD VSWN+M+
Sbjct: 273 KALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMV 332

Query: 234 TGFVQNDLYCKAMQFFRELQGA-----------------------------------GQK 258
           TG+ Q+  +  A + F  ++                                     G +
Sbjct: 333 TGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSE 392

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS------------DLQIGNTLMDMY 306
           P+ V  ++ +SA   LG L  G E+HAY++K+  +S            DL + N L+DMY
Sbjct: 393 PNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMY 452

Query: 307 AKCCCVNYMGRVFYQMT--AQDFISWTTIIAGYAQNNCHLKALELFRTV--QLEGLDADV 362
           +KC        +F  +    ++ ++WT +I GYAQ      AL++F  +  +   +  + 
Sbjct: 453 SKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNA 512

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKG---LSDLVILNAIVDVYGKCGNIDYSRNVF 419
             I  +LMAC+ L  +   K+IH Y+ R      S   + N ++D+Y KCG++D +RNVF
Sbjct: 513 YTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVF 572

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           +S+  ++ VSWTSM+S Y  +G   EAL++F  M +A    D I+ +  L A S   ++ 
Sbjct: 573 DSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVD 632

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMI 535
           +G  LN F I+R+ +++  S    + ++D+ ARCG LD A K    +  +   ++W +++
Sbjct: 633 QG--LNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALL 690

Query: 536 NANGLHGR---GKVAIDLFYKMEAES 558
           +A  +H      + A++    M+AE+
Sbjct: 691 SACRVHSNVELAEYALNKLVNMKAEN 716



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 142/549 (25%), Positives = 246/549 (44%), Gaps = 91/549 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR---TVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----- 52
           MY +CGS+ DA  +FD+++++    V +WN+++ A+V    P   LE +S M ++     
Sbjct: 193 MYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKA 252

Query: 53  -GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
                D  +   ++ ACA LK L    +IH   ++ G  +  F+ N+L+  YAKC     
Sbjct: 253 TNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMND 312

Query: 112 ARQLFDRMGEKE----------------------------------DVVLWNSIISAYSA 137
           A ++F+ M  K+                                  DV+ W+++I+ Y+ 
Sbjct: 313 AVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQ 372

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS-------- 189
            G   EAL  F++M   G   N+ T ++ L AC      + GMEIHA ++K         
Sbjct: 373 RGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDND 432

Query: 190 ------GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS--VSWNSMLTGFVQNDL 241
                 G++L VY  NALI MY++C     A  +   +  ++   V+W  M+ G+ Q   
Sbjct: 433 FGGDGDGEDLMVY--NALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGD 490

Query: 242 YCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG--FVSDLQ 297
              A++ F E+  +     P+       + A   L  L  GK++HAY  +      S   
Sbjct: 491 SNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYF 550

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N L+DMY+KC  V+    VF  M  ++ +SWT++++GY  +    +AL++F  +Q  G
Sbjct: 551 VANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAG 610

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-------------AIVD 404
              D +    +L ACS           H  ++ +GL+   I+               ++D
Sbjct: 611 FVPDDISFLVLLYACS-----------HSGMVDQGLNYFDIMRRDYDVVASAEHYACVID 659

Query: 405 VYGKCGNIDYS-RNVFESIESKDVVSWTSMISS-YVHNGLANEALELFYLMNEANVESDS 462
           +  +CG +D + + + E       V W +++S+  VH+ +      L  L+N       S
Sbjct: 660 LLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGS 719

Query: 463 ITLVSALSA 471
            TL+S + A
Sbjct: 720 YTLISNIYA 728


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 281/785 (35%), Positives = 471/785 (60%), Gaps = 9/785 (1%)

Query: 54  ISVDAFTFPCVI--KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
           I    +  P  I  + C  LK+L    +I  L++K G+ +       L++++ K     +
Sbjct: 38  IPSHVYRHPSAILLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITE 94

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A ++F+ +  K DV L+++++  Y+ +    +A+  +  M+   ++   Y F   LQ   
Sbjct: 95  AARVFEPVEHKLDV-LYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSG 153

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           ++     G EIH   + +G    ++   A++ +YA+C ++ +A  +  ++  +D VSWN+
Sbjct: 154 ENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNT 213

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++ G+ QN    +A+Q   ++Q AGQKPD +  V+ + A   L  L  G+ +H YA + G
Sbjct: 214 VVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAG 273

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F   + +   ++D Y KC  V     VF  M++++ +SW T+I GYAQN    +A   F 
Sbjct: 274 FEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFL 333

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCG 410
            +  EG++   + +   L AC+ L  + + + +H  +  K +  D+ ++N+++ +Y KC 
Sbjct: 334 KMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCK 393

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            +D + +VF +++ K VV+W +MI  Y  NG  NEAL LF  M   +++ DS TLVS ++
Sbjct: 394 RVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVIT 453

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           A + LS+ ++ K ++G  IR   +    V ++L+D +A+CGA+  A K+F+ +Q + +I 
Sbjct: 454 ALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVIT 513

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W +MI+  G +G G+ A+DLF +M+  S  P+ ITFL+++ ACSHSGL+ EG  + E M+
Sbjct: 514 WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMK 573

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
            +Y L+P  +HY  +VDLLGRA  L++A++F++ M ++P   V  A+LGACR+H N ELG
Sbjct: 574 ENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELG 633

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
           E  A +L +LDP + G +VL++N++A++  W  V +VR  M   G++KTPG S +E+ N+
Sbjct: 634 EKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNE 693

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSER 770
           +H+F +   +H +S  IY  L  + +++ +  GYV  T  + H+VEE+ K Q+L  HSER
Sbjct: 694 VHTFYSGSTNHPQSKRIYAYLETLGDEM-KAAGYVPDTNSI-HDVEEDVKEQLLSSHSER 751

Query: 771 LAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCS 830
           LAIA+G+L +  G+ I I KNLRVC DCH   K +S + GRE++VRD  RFHHF+ G+CS
Sbjct: 752 LAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICS 811

Query: 831 CGDYW 835
           CGDYW
Sbjct: 812 CGDYW 816



 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/546 (29%), Positives = 286/546 (52%), Gaps = 8/546 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++ K  S+ +A ++F+ V  +    ++ ML  Y  N      +  Y RMR   +    + 
Sbjct: 85  LFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYD 144

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +++      DL  G +IHG+V+  G+ S  F + ++V +YAKC     A ++F+RM 
Sbjct: 145 FTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP 204

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ D+V WN++++ Y+ +G    A+ +  +MQ  G   ++ T V+ L A  D     +G 
Sbjct: 205 QR-DLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGR 263

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH    ++G    V VA A++  Y +CG +  A  V   + +++ VSWN+M+ G+ QN 
Sbjct: 264 SIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNG 323

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F ++   G +P  V  + A+ A   LG+L  G+ +H    ++    D+ + N
Sbjct: 324 ESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMN 383

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MY+KC  V+    VF  +  +  ++W  +I GYAQN C  +AL LF  +Q   +  
Sbjct: 384 SLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKP 443

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D   + SV+ A + L    Q K IHG  IR  +  ++ +  A++D + KCG I  +R +F
Sbjct: 444 DSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLF 503

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + ++ + V++W +MI  Y  NG   EAL+LF  M   +V+ + IT +S ++A S   +++
Sbjct: 504 DLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVE 563

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMI 535
           +G  +  F  +++ + LE ++    ++VD+  R G LD A K    +  K  + +  +M+
Sbjct: 564 EG--MYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAML 621

Query: 536 NANGLH 541
            A  +H
Sbjct: 622 GACRIH 627


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 283/788 (35%), Positives = 462/788 (58%), Gaps = 5/788 (0%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           MR  G+  + F  P V+K    + D   GA++H + +  G+ S  F+ N+LVAMY     
Sbjct: 1   MRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              AR++FD  G + + V WN ++SAY  + QC +A+ +F EM   G+    + F   + 
Sbjct: 58  MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           AC  S     G ++HA  V+ G    V+ ANAL+ MY + G++  A+ +  ++ + D VS
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           WN++++G V N    +A++   +++ +G  P+     + + A    G    G+++H + I
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 237

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K    SD  IG  L+DMYAK   ++   +VF  M+ +D I W  +I+G +    H +A  
Sbjct: 238 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFS 297

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYG 407
           +F  ++ EGL  +   + +VL + + L+  S T+++H    + G + D  ++N ++D Y 
Sbjct: 298 IFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYW 357

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KC  +  +  VFE   S D+++ TSMI++         A++LF  M    +E D   L S
Sbjct: 358 KCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 417

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            L+A +SLS  ++GK+++  +I++ F  +    ++LV  YA+CG+++ A   F+ +  + 
Sbjct: 418 LLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG 477

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           ++ W++MI     HG GK A++LF +M  E   P+HIT  ++L AC+H+GL++E K++  
Sbjct: 478 VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFN 537

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
            M+  + +D   EHY+C++DLLGRA  L++A + V SM  +  A VW ALLGA RVH + 
Sbjct: 538 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDP 597

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           ELG++ A+KL  L+P   G +VL++N +A+S  W +V +VR  M+ S +KK P  SW+E+
Sbjct: 598 ELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEV 657

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGH 767
            +K+H+FI  DKSH  + EIY KL E+ + L  + GY+      LH+++  EK  +L  H
Sbjct: 658 KDKVHTFIVGDKSHPMTKEIYSKLDELGD-LMSKAGYIPNVDVDLHDLDRSEKELLLSHH 716

Query: 768 SERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
           SERLA+A+ +L +  G+ IR+ KNLR+C DCH   K +S +  RE+++RD NRFHHF  G
Sbjct: 717 SERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDG 776

Query: 828 VCSCGDYW 835
            CSCGDYW
Sbjct: 777 TCSCGDYW 784



 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 178/597 (29%), Positives = 313/597 (52%), Gaps = 12/597 (2%)

Query: 1   MYGKCGSVLDAEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MYG  G + DA ++FD+  S+R   +WN ++ AYV N +    ++ +  M   GI    F
Sbjct: 51  MYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEF 110

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
            F CV+ AC   +++D G ++H +V++ GY+   F  N+LV MY K      A  +F++M
Sbjct: 111 GFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKM 170

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +  DVV WN++IS    +G    A+ L  +M+  GLV N +   + L+AC  +    LG
Sbjct: 171 PD-SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 229

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH   +K+  +   Y+   L+ MYA+   + +A  V   + ++D + WN++++G    
Sbjct: 230 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHG 289

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             + +A   F  L+  G   ++      + ++  L      +++HA A K GF+ D  + 
Sbjct: 290 GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVV 349

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+D Y KC C++   RVF + ++ D I+ T++I   +Q +    A++LF  +  +GL+
Sbjct: 350 NGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 409

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYII-RKGLSDLVILNAIVDVYGKCGNIDYSRNV 418
            D  ++ S+L AC+ L    Q K++H ++I R+ +SD    NA+V  Y KCG+I+ +   
Sbjct: 410 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELA 469

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F S+  + VVSW++MI     +G    ALELF  M +  +  + IT+ S L A +   ++
Sbjct: 470 FSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLV 529

Query: 479 KKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
            + K   N      G +      S ++D+  R G LD A ++ N +  + +  +W +++ 
Sbjct: 530 DEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLG 589

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           A+ +H     GK+A +  + +E E  +  H+  LA  YA   SG+ NE  K  ++M+
Sbjct: 590 ASRVHKDPELGKLAAEKLFILEPEK-SGTHV-LLANTYAS--SGMWNEVAKVRKLMK 642


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 292/832 (35%), Positives = 479/832 (57%), Gaps = 4/832 (0%)

Query: 2    YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
            YG  G V +A++LF+++    V +W +++  Y  +G P  VL  Y RMR  G+S +  TF
Sbjct: 241  YGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTF 300

Query: 62   PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              V  +C +L+D   G ++ G +++ G++ +  + NSL++M++      +A  +FD M E
Sbjct: 301  ATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNE 360

Query: 122  KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
              D++ WN++ISAY+  G C E+L  F  M+ +   TN+ T  + L  C        G  
Sbjct: 361  C-DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRG 419

Query: 182  IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            IH   VK G +  V + N L+ +Y+  G+  +A  V   +  +D +SWNSM+  +VQ+  
Sbjct: 420  IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGK 479

Query: 242  YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
                ++   EL   G+  + V   +A++A      L+  K +HA  I  GF   L +GN 
Sbjct: 480  CLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA 539

Query: 302  LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
            L+ MY K   +    +V   M   D ++W  +I G+A+N    +A++ ++ ++ +G+ A+
Sbjct: 540  LVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPAN 599

Query: 362  VMIIGSVLMACSGLK-CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
             + + SVL ACS     +     IH +I+  G  SD  + N+++ +Y KCG+++ S  +F
Sbjct: 600  YITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIF 659

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            + + +K  ++W +M+++  H+G   EAL++F  M    V  D  +    L+A ++L++L+
Sbjct: 660  DGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLE 719

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            +G++L+G +I+ GF  +  V ++ +DMY +CG +    K+      +  + W  +I+A  
Sbjct: 720  EGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFA 779

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             HG  + A + F++M      PDH+TF++LL AC+H GL++EG  + + M  ++ + P  
Sbjct: 780  RHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGI 839

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            EH  C++DLLGR+  L  A  F++ M + P    W +LL ACR+H N EL    A+ LLE
Sbjct: 840  EHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLE 899

Query: 660  LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            LDP +   YVL SNV A S KW+DVE +R  M  + +KK P  SW+++ +K+HSF   +K
Sbjct: 900  LDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEK 959

Query: 720  SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
             H ++  I  KL E+  K+ +E GYV  T F LH+++EE+K   L+ HSERLA+A+G++ 
Sbjct: 960  YHPQASRISAKLGELM-KMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLIN 1018

Query: 780  STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
            + E S +RI KNLRVC DCHS  K VS + GR++V+RD  RFHHF  G CSC
Sbjct: 1019 TPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 185/676 (27%), Positives = 342/676 (50%), Gaps = 9/676 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G++  A  +FD++  R   +W+ ML  YV  G     +  + +M  LG+  + F 
Sbjct: 138 MYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFM 197

Query: 61  FPCVIKACAMLKDL-DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              +I AC+    + D G ++HG V+K G     ++  +LV  Y        A++LF+ M
Sbjct: 198 VASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM 257

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +  +VV W S++  YS SG   E L +++ M++ G+  N  TF     +C     + LG
Sbjct: 258 PD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 316

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++    ++ G    V VAN+LI+M++    + EA  V   +   D +SWN+M++ +  +
Sbjct: 317 YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 376

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L  ++++ F  ++    + +     + +S    + NL  G+ +H   +K G  S++ I 
Sbjct: 377 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 436

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           NTL+ +Y++         VF  MT +D ISW +++A Y Q+   L  L++   +   G  
Sbjct: 437 NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKV 496

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNV 418
            + +   S L ACS  +C+ ++K +H  II  G  D +I+ NA+V +YGK G +  ++ V
Sbjct: 497 MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 556

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL-SI 477
            +++   D V+W ++I  +  N   NEA++ + L+ E  + ++ IT+VS L A S+   +
Sbjct: 557 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDL 616

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           LK G  ++  I+  GF  +  V +SL+ MYA+CG L+ +N +F+ +  K  I W +M+ A
Sbjct: 617 LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAA 676

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLD 596
           N  HG G+ A+ +F +M       D  +F   L A ++  ++ EG++    +++  ++ D
Sbjct: 677 NAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESD 736

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
               + A  +D+ G+   + +  + +    I  +   W  L+ A   H   +       +
Sbjct: 737 LHVTNAA--MDMYGKCGEMHDVLKML-PQPINRSRLSWNILISAFARHGCFQKARETFHE 793

Query: 657 LLELDPGNPGNYVLIS 672
           +L+L P  P +   +S
Sbjct: 794 MLKLGP-KPDHVTFVS 808



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 161/552 (29%), Positives = 287/552 (51%), Gaps = 7/552 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+    SV +A  +FD +++  + +WNAM+ AY  +G     L  +  MR L    ++ T
Sbjct: 341 MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 400

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++  C+ + +L  G  IHGLV+K G DS   I N+L+ +Y++      A  +F  M 
Sbjct: 401 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 460

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D++ WNS+++ Y   G+CL+ L +  E+ ++G V N  TF +AL AC +        
Sbjct: 461 ER-DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESK 519

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  + +G +  + V NAL+ MY + G M EA  VL  +   D V+WN+++ G  +N+
Sbjct: 520 IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENE 579

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL-NGKELHAYAIKQGFVSDLQIG 299
              +A++ ++ ++  G   + +  V+ + A     +LL +G  +HA+ +  GF SD  + 
Sbjct: 580 EPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVK 639

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+ MYAKC  +N    +F  +  +  I+W  ++A  A + C  +AL++F  ++  G++
Sbjct: 640 NSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVN 699

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D       L A + L  + + +++HG +I+ G  SDL + NA +D+YGKCG +     +
Sbjct: 700 LDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKM 759

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
                ++  +SW  +IS++  +G   +A E F+ M +   + D +T VS LSA +   ++
Sbjct: 760 LPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLV 819

Query: 479 KKGKELNGFIIRKGFNLEG-SVASSLVDMYARCGALDIANKVFN--CVQTKDLILWTSMI 535
            +G      + R+     G      ++D+  R G L  A        V   DL  W S++
Sbjct: 820 DEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLA-WRSLL 878

Query: 536 NANGLHGRGKVA 547
            A  +HG  ++A
Sbjct: 879 AACRIHGNLELA 890



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 258/521 (49%), Gaps = 5/521 (0%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           ++A  FP  +K  + +     G  +H   +    +   F  N+L+ MY+K  +   AR +
Sbjct: 94  LNAVNFP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYV 151

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M  + +   W++++S Y   G   EA+GLF +M  +G+  N +   + + AC  S +
Sbjct: 152 FDEMRHRNEAS-WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGY 210

Query: 176 -ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G ++H   VK+G    VYV  AL+  Y   G +  A  +  ++ + + VSW S++ 
Sbjct: 211 MADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMV 270

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
           G+  +    + +  ++ ++  G   +Q       S+ G L + + G ++  + I+ GF  
Sbjct: 271 GYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFED 330

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
            + + N+L+ M++    V     VF  M   D ISW  +I+ YA +    ++L  F  ++
Sbjct: 331 SVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 390

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
               + +   + S+L  CS +  +   + IHG +++ GL S++ I N ++ +Y + G  +
Sbjct: 391 HLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSE 450

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  VF+++  +D++SW SM++ YV +G   + L++   + +     + +T  SAL+A S
Sbjct: 451 DAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACS 510

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           +   L + K ++  II  GF+    V ++LV MY + G +  A KV   +   D + W +
Sbjct: 511 NPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNA 570

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +I  +  +     A+  +  +  +    ++IT +++L ACS
Sbjct: 571 LIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 611



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 1/116 (0%)

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            L   S ++    GK L+ F I    NL     ++L++MY++ G ++ A  VF+ ++ ++
Sbjct: 100 PLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRN 159

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG-LINEG 582
              W++M++     G  + A+ LF +M      P+     +L+ ACS SG + +EG
Sbjct: 160 EASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEG 215


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 311/844 (36%), Positives = 479/844 (56%), Gaps = 20/844 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC S+ D E++F ++  R   +W  ++ AY  +G+  R +  + RM+  G+  DA T
Sbjct: 71  LYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVT 130

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+KACA L DL  G  IH  +++ G +    + N L+ +Y  C     A  LF+RM 
Sbjct: 131 FLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM- 189

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+V WN+ I+A + SG    AL LF+ MQ  G+     T V  L  C          
Sbjct: 190 -ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKI---RQAR 245

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH+   +SG    + V+ AL + YAR G + +A  V  +   +D VSWN+ML  + Q+ 
Sbjct: 246 AIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHG 305

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F  +   G  P +V  VNA +      +L  G+ +HA A+++G   D+ +GN
Sbjct: 306 HMSEAALLFARMLHEGIPPSKVTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGN 362

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY +C       R  ++    + +SW T+IAG +Q     +ALELF+ +QLEG+  
Sbjct: 363 ALLDMYTRCGSPEE-ARHLFEGIPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAP 421

Query: 361 DVMIIGSVLMACSG----LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
                 ++L A +      + M++ +++H  I+  G  S+  I  A+V +Y  CG ID +
Sbjct: 422 VRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEA 481

Query: 416 RNVFE--SIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
              F+  ++E + DVVSW ++ISS   +G    AL  F  M+   V  + IT V+ L A 
Sbjct: 482 AASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDAC 541

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT-KDLILW 531
           +  + L +G  ++  +   G      VA++L  MY RCG+L+ A ++F  V   +D++++
Sbjct: 542 AGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIF 601

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            +MI A   +G    A+ LF++M+ E   PD  +F+++L ACSH GL +EG +    MR 
Sbjct: 602 NAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQ 661

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
            Y + P  +HYAC VD+LGRA  L +A + +R M ++PT  VW  LLGACR + + + G 
Sbjct: 662 SYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGR 721

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
           +    + ELDPG+   YV++SN+ A + KW +  +VR  M   GL+K  G SWIEI +++
Sbjct: 722 LANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRV 781

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
           H F+A D+SH  S+EIY++L  +  ++ RE GYV  T+ VL  V+E EK ++L  HSERL
Sbjct: 782 HEFVAGDRSHPRSEEIYRELERLHAEI-REIGYVPDTRLVLRKVDEAEKERLLCQHSERL 840

Query: 772 AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           AIA GV+ S+  + +R+ KNLRVC DCH+  K +S++  +E+VVRD +RFHHF  G CSC
Sbjct: 841 AIALGVMSSSTDT-VRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSC 899

Query: 832 GDYW 835
           GDYW
Sbjct: 900 GDYW 903



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 162/585 (27%), Positives = 292/585 (49%), Gaps = 20/585 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++A    + L  G +IH  ++  G +  + + N L+ +Y KC       ++F R+ E  
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLE--EELGNHLLRLYLKCESLGDVEEVFSRL-EVR 91

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D   W +II+AY+  GQ   A+ +F  MQ+ G+  +A TF+A L+AC      + G  IH
Sbjct: 92  DEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH 151

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           A  V+SG   +  +AN L+ +Y  CG +  A  +L++   +D VSWN+ +    Q+    
Sbjct: 152 AWIVESGLEGKSVLANLLLHIYGSCGCVASAM-LLFERMERDLVSWNAAIAANAQSGDLD 210

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
            A++ F+ +Q  G +P ++  V  +S   +   +   + +H+   + G    L +   L 
Sbjct: 211 MALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALA 267

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
             YA+   ++    VF +   +D +SW  ++  YAQ+    +A  LF  +  EG+    +
Sbjct: 268 SAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKV 327

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESI 422
            + +    CS L+     + IH   + KGL  D+V+ NA++D+Y +CG+ + +R++FE I
Sbjct: 328 TLVNASTGCSSLRF---GRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI 384

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS----LSIL 478
              + VSW +MI+     G    ALELF  M    +     T ++ L A +S       +
Sbjct: 385 PG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN---CVQTKDLILWTSMI 535
            +G++L+  I+  G+  E ++ +++V MYA CGA+D A   F         D++ W ++I
Sbjct: 444 AEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAII 503

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           ++   HG GK A+  F +M+    AP+ IT +A+L AC+ +  + EG    + +R    +
Sbjct: 504 SSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLR-HSGM 562

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           +        L  + GR   LE A +    + +E    ++ A++ A
Sbjct: 563 ESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 229/446 (51%), Gaps = 16/446 (3%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           T     V  L+A  D    + G  IHA  V  G  L+  + N L+ +Y +C  + +   V
Sbjct: 27  TRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLG--LEEELGNHLLRLYLKCESLGDVEEV 84

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             +LE +D  SW +++T + ++    +A+  F  +Q  G + D V  +  + A  RLG+L
Sbjct: 85  FSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDL 144

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+ +HA+ ++ G      + N L+ +Y  C CV     +F +M  +D +SW   IA  
Sbjct: 145 SQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAAN 203

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-L 396
           AQ+     ALELF+ +QLEG+    + +   L  C+ ++   Q + IH  +   GL   L
Sbjct: 204 AQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIR---QARAIHSIVRESGLEQTL 260

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           V+  A+   Y + G++D ++ VF+    +DVVSW +M+ +Y  +G  +EA  LF  M   
Sbjct: 261 VVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE 320

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +    +TLV+A +  SS   L+ G+ ++   + KG + +  + ++L+DMY RCG+ + A
Sbjct: 321 GIPPSKVTLVNASTGCSS---LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEA 377

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS-- 574
             +F  +   + + W +MI  +   G+ K A++LF +M+ E  AP   T+L LL A +  
Sbjct: 378 RHLFEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASN 436

Query: 575 --HSGLINEGKKF-LEIMRCDYQLDP 597
              +  + EG+K    I+ C Y  +P
Sbjct: 437 PEEARAMAEGRKLHSRIVSCGYASEP 462



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 156/307 (50%), Gaps = 11/307 (3%)

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           +L A    + +SQ + IH  I+  GL +  + N ++ +Y KC ++     VF  +E +D 
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLEE-ELGNHLLRLYLKCESLGDVEEVFSRLEVRDE 93

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
            SWT++I++Y  +G A  A+ +F+ M +  V  D++T ++ L A + L  L +G+ ++ +
Sbjct: 94  ASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAW 153

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
           I+  G   +  +A+ L+ +Y  CG +  A  +F  ++ +DL+ W + I AN   G   +A
Sbjct: 154 IVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMA 212

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           ++LF +M+ E   P  IT +  L  C+    I + +    I+R +  L+        L  
Sbjct: 213 LELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVR-ESGLEQTLVVSTALAS 268

Query: 608 LLGRANHLEEAYQ-FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
              R  HL++A + F R+ + +  +  W A+LGA   H +     ++  ++L    G P 
Sbjct: 269 AYARLGHLDQAKEVFDRAAERDVVS--WNAMLGAYAQHGHMSEAALLFARMLH--EGIPP 324

Query: 667 NYVLISN 673
           + V + N
Sbjct: 325 SKVTLVN 331


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 299/823 (36%), Positives = 477/823 (57%), Gaps = 44/823 (5%)

Query: 41  RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV 100
           + + TY+ M   G+  D F FP V+KA A ++DL+ G ++H  V K G      + NSLV
Sbjct: 68  QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127

Query: 101 AMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
            MY KC D   AR++FD +  ++DV  WNS+I+A     +   A+ LFR M    +   +
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVS-WNSMINAACRFEEWELAVHLFRLMLLENVGPTS 186

Query: 161 YTFVAALQACED-SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
           +T V+   AC +  +   LG ++HA  +++G + + +  NAL+ MYA+ G++ EA  +  
Sbjct: 187 FTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFD 245

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
             ++KD VSWN++++   QND + +A+ +   +  +G +P+ V   + + A   L  L  
Sbjct: 246 VFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGC 305

Query: 280 GKELHAYAI-KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           GKE+HA+ +     + +  +G  L+DMY  C        VF  M  +    W  +IAGY 
Sbjct: 306 GKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYV 365

Query: 339 QNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
           +N    +A+ELF  +  E GL  + + + SVL AC   +     + IH  +++ G   D 
Sbjct: 366 RNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDK 425

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            + NA++D+Y + G I+ +R++F S+  KD+VSW +MI+ YV  G  ++AL L + M   
Sbjct: 426 YVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 485

Query: 457 NVE------------------SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
             E                   +S+TL++ L   ++L+ L KGKE++ + +++  + + +
Sbjct: 486 QAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVA 545

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE- 557
           V S+LVDMYA+CG L+++  VF  +  +++I W  +I A G+HG+G+ A+ LF +M  E 
Sbjct: 546 VGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEG 605

Query: 558 ----SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
                  P+ +T++A+  + SHSG+++EG      M+  + ++P  +HYACLVDLLGR+ 
Sbjct: 606 DNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSG 665

Query: 614 HLEEAYQFVRSMQIE-PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
            +EEAY  +++M       + W +LLGAC++H N E+GEI AK L  LDP          
Sbjct: 666 QIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDP---------- 715

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           NV     K      +  +M+  G++K PG SWIE G+++H F+A D SH +S E+++ L 
Sbjct: 716 NVLDYGTKQS---MLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLE 772

Query: 733 EITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNL 792
            ++ ++++EG YV  T  VLHNV EEEK  ML GHSERLAIA+G+L ++ G+ IR+ KNL
Sbjct: 773 TLSLRMKKEG-YVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNL 831

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           RVC DCH   K +S++  RE+++RD  RFHHF  G CSCGDYW
Sbjct: 832 RVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 169/576 (29%), Positives = 286/576 (49%), Gaps = 42/576 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG +  A ++FD+++ R   +WN+M+ A     E    +  +  M +  +   +FT
Sbjct: 129 MYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFT 188

Query: 61  FPCVIKACA-MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V  AC+ ++  L  G ++H  VL+ G D   F  N+LV MYAK     +A+ LFD  
Sbjct: 189 LVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVF 247

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +K D+V WN+IIS+ S + +  EAL     M + G+  N  T  + L AC        G
Sbjct: 248 DDK-DLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCG 306

Query: 180 MEIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            EIHA  + +   ++  +V  AL+ MY  C +  +   V   +  +    WN+M+ G+V+
Sbjct: 307 KEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVR 366

Query: 239 NDLYCKAMQFFRELQ-GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           N+   +A++ F E+    G  P+ V   + + A  R  + L+ + +H+  +K GF  D  
Sbjct: 367 NEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKY 426

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE- 356
           + N LMDMY++   +     +F  M  +D +SW T+I GY     H  AL L   +Q   
Sbjct: 427 VQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 486

Query: 357 -----------------GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
                             L  + + + +VL  C+ L  + + KEIH Y +++ LS D+ +
Sbjct: 487 AEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAV 546

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM----- 453
            +A+VD+Y KCG ++ SR VFE +  ++V++W  +I +Y  +G   EAL+LF  M     
Sbjct: 547 GSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGD 606

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK---GFNLEGSVASSLVDMYARC 510
           N   +  + +T ++  ++ S   ++ +G  LN F   K   G        + LVD+  R 
Sbjct: 607 NNREIRPNEVTYIAIFASLSHSGMVDEG--LNLFYTMKAKHGIEPTSDHYACLVDLLGRS 664

Query: 511 GALDIANKVFNCVQT-----KDLILWTSMINANGLH 541
           G ++ A   +N ++T     K +  W+S++ A  +H
Sbjct: 665 GQIEEA---YNLIKTMPSNMKKVDAWSSLLGACKIH 697



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 236/485 (48%), Gaps = 57/485 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G V +A+ LFD    + + +WN ++ +   N      L     M   G+  +  T
Sbjct: 230 MYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVT 289

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-----LVAMYAKCYDFRKARQL 115
              V+ AC+ L+ L CG +IH  VL     + D I NS     LV MY  C    K R +
Sbjct: 290 LASVLPACSHLEMLGCGKEIHAFVLM----NNDLIENSFVGCALVDMYCNCKQPEKGRLV 345

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACE--D 172
           FD M  +  + +WN++I+ Y  +    EA+ LF EM   +GL  N+ T  + L AC   +
Sbjct: 346 FDGMFRRT-IAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCE 404

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
           S  +  G  IH+  VK G     YV NAL+ MY+R G++  A  +   +  KD VSWN+M
Sbjct: 405 SFLDKEG--IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTM 462

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQ-------------------KPDQVCTVNAVSASGR 273
           +TG+V    +  A+    ++Q  GQ                   KP+ V  +  +     
Sbjct: 463 ITGYVVCGRHDDALNLLHDMQ-RGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAA 521

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           L  L  GKE+HAYA+KQ    D+ +G+ L+DMYAKC C+N    VF QM+ ++ I+W  +
Sbjct: 522 LAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVL 581

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           I  Y  +    +AL+LFR +  EG D +  I  + +   +    +S     H  ++ +GL
Sbjct: 582 IMAYGMHGKGEEALKLFRRMVEEG-DNNREIRPNEVTYIAIFASLS-----HSGMVDEGL 635

Query: 394 SDLVILNA-------------IVDVYGKCGNIDYSRNVFESIES--KDVVSWTSMISS-Y 437
           +    + A             +VD+ G+ G I+ + N+ +++ S  K V +W+S++ +  
Sbjct: 636 NLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACK 695

Query: 438 VHNGL 442
           +H  L
Sbjct: 696 IHQNL 700



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 3/159 (1%)

Query: 423 ESKDVVSWTSMISSYVHNGLA-NEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           E +    W S + S   +    ++A+  +  M  A V  D+    + L A + +  L  G
Sbjct: 45  EPRLPSEWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLG 104

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           K+L+  + + G  L  +V +SLV+MY +CG +D A +VF+ +  +D + W SMINA    
Sbjct: 105 KQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRF 164

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
              ++A+ LF  M  E+  P   T +++ +ACS+  LIN
Sbjct: 165 EEWELAVHLFRLMLLENVGPTSFTLVSVAHACSN--LIN 201


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 287/722 (39%), Positives = 453/722 (62%), Gaps = 17/722 (2%)

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL---- 178
           E  + WN +++  + SG    ++GLF++M   G+  ++YTF     +C   SF +L    
Sbjct: 7   EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF-----SCVSKSFSSLRSVH 61

Query: 179 -GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G ++H   +KSG   +  V N+L+A Y +  ++  A  V  ++  +D +SWNS++ G+V
Sbjct: 62  GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 121

Query: 238 QNDLYCKAMQFFRELQGAGQKPD--QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            N L  K +  F ++  +G + D   + +V A  A  RL +L  G+ +H+  +K  F  +
Sbjct: 122 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGVKACFSRE 179

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            +  NTL+DMY+KC  ++    VF +M+ +  +S+T++IAGYA+     +A++LF  ++ 
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
           EG+  DV  + +VL  C+  + + + K +H +I    L  D+ + NA++D+Y KCG++  
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAAS 473
           +  VF  +  KD++SW ++I  Y  N  ANEAL LF  L+ E     D  T+   L A +
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 359

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           SLS   KG+E++G+I+R G+  +  VA+SLVDMYA+CGAL +A+ +F+ + +KDL+ WT 
Sbjct: 360 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 419

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           MI   G+HG GK AI LF +M       D I+F++LLYACSHSGL++EG +F  IMR + 
Sbjct: 420 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 479

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
           +++P  EHYAC+VD+L R   L +AY+F+ +M I P A +W ALL  CR+H + +L E V
Sbjct: 480 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 539

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHS 713
           A+K+ EL+P N G YVL++N++A + KW+ V+++R R+   GL+K PG SWIEI  +++ 
Sbjct: 540 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNI 599

Query: 714 FIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAI 773
           F+A D S+ E++ I   L ++  ++  E GY   T++ L + EE EK + L GHSE+LA+
Sbjct: 600 FVAGDSSNPETENIEAFLRKVRARMIEE-GYSPLTKYALIDAEEMEKEEALCGHSEKLAM 658

Query: 774 AYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
           A G++ S  G +IR+TKNLRVC DCH   K +S+L  RE+V+RD+NRFH F+ G CSC  
Sbjct: 659 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 718

Query: 834 YW 835
           +W
Sbjct: 719 FW 720



 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 185/564 (32%), Positives = 299/564 (53%), Gaps = 8/564 (1%)

Query: 15  FDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDL 74
           FD+V       WN ++     +G+    +  + +M   G+ +D++TF CV K+ + L+ +
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 75  DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
             G ++HG +LK G+   + + NSLVA Y K      AR++FD M E+ DV+ WNSII+ 
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER-DVISWNSIING 119

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
           Y ++G   + L +F +M   G+  +  T V+    C DS   +LG  +H+  VK+  + +
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
               N L+ MY++CG +  A  V  ++ ++  VS+ SM+ G+ +  L  +A++ F E++ 
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G  PD       ++   R   L  GK +H +  +     D+ + N LMDMYAKC  +  
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACS 373
              VF +M  +D ISW TII GY++N    +AL LF  +  E     D   +  VL AC+
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 359

Query: 374 GLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L    + +EIHGYI+R G  SD  + N++VD+Y KCG +  +  +F+ I SKD+VSWT 
Sbjct: 360 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 419

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MI+ Y  +G   EA+ LF  M +A +E+D I+ VS L A S   ++ +G      I+R  
Sbjct: 420 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN-IMRHE 478

Query: 493 FNLEGSVA--SSLVDMYARCGALDIANK-VFNCVQTKDLILWTSMINANGLHGRGKVAID 549
             +E +V   + +VDM AR G L  A + + N     D  +W +++    +H   K+A  
Sbjct: 479 CKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 538

Query: 550 LFYKM-EAESFAPDHITFLALLYA 572
           +  K+ E E     +   +A +YA
Sbjct: 539 VAEKVFELEPENTGYYVLMANIYA 562



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 201/374 (53%), Gaps = 2/374 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            Y K   V  A ++FD++++R V +WN+++  YVSNG   + L  + +M V GI +D  T
Sbjct: 88  FYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLAT 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V   CA  + +  G  +H + +K  +   D   N+L+ MY+KC D   A+ +F  M 
Sbjct: 148 IVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 207

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++  VV + S+I+ Y+  G   EA+ LF EM+  G+  + YT  A L  C        G 
Sbjct: 208 DR-SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    ++     ++V+NAL+ MYA+CG M EA  V  ++  KD +SWN+++ G+ +N 
Sbjct: 267 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 326

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +A+  F  L    +  PD+      + A   L     G+E+H Y ++ G+ SD  + 
Sbjct: 327 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 386

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+DMYAKC  +     +F  + ++D +SWT +IAGY  +    +A+ LF  ++  G++
Sbjct: 387 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 446

Query: 360 ADVMIIGSVLMACS 373
           AD +   S+L ACS
Sbjct: 447 ADEISFVSLLYACS 460



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 2/276 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A+ +F ++S R+V ++ +M+  Y   G     ++ +  M   GIS D +T
Sbjct: 189 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 248

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+  CA  + LD G ++H  + +       F+ N+L+ MYAKC   ++A  +F  M 
Sbjct: 249 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 308

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFR-EMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            K D++ WN+II  YS +    EAL LF   ++      +  T    L AC   S    G
Sbjct: 309 VK-DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 367

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            EIH   +++G     +VAN+L+ MYA+CG +  A  +   + +KD VSW  M+ G+  +
Sbjct: 368 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH 427

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
               +A+  F +++ AG + D++  V+ + A    G
Sbjct: 428 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 463



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 5/209 (2%)

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ ++ +  + W  +++    +G  + ++ LF  M  + VE DS T      + SSL  +
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             G++L+GFI++ GF    SV +SLV  Y +   +D A KVF+ +  +D+I W S+IN  
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF--LEIMRCDYQLD 596
             +G  +  + +F +M       D  T +++   C+ S LI+ G+    + +  C  + D
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSM 625
            +      L+D+  +   L+ A    R M
Sbjct: 181 RFCN---TLLDMYSKCGDLDSAKAVFREM 206


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 292/836 (34%), Positives = 476/836 (56%), Gaps = 7/836 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YG  G V + + +F ++ +  + +W +++  Y  NG    V+  Y R+R  G+  +    
Sbjct: 104 YGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAM 163

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             VI++C +L D   G ++ G V+K G D+T  + NSL++M+  C    +A  +FD M E
Sbjct: 164 ATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKE 223

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D + WNSII+A   +G C ++L  F +M+     T+  T  A L  C  +     G  
Sbjct: 224 R-DTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRG 282

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   VKSG    V V N+L++MY++ GK  +A  V +++  +D +SWNSM+   V N  
Sbjct: 283 LHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGN 342

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           Y +A++   E+    +  + V    A+SA   L  L   K +HA+ I  G   +L IGN 
Sbjct: 343 YPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNA 399

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ MY K   +    RV   M  +D ++W  +I G+A N     A+E F  ++ EG+  +
Sbjct: 400 LVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVN 459

Query: 362 VMIIGSVLMA-CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
            + I ++L A  S    +     IH +I+  G   +  + ++++ +Y +CG+++ S  +F
Sbjct: 460 YITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIF 519

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + + +K+  +W +++S+  H G   EAL+L   M    +  D  +   A +   +L++L 
Sbjct: 520 DVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLD 579

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +G++L+  II+ GF     V ++ +DMY +CG +D   ++    +++    W  +I+A  
Sbjct: 580 EGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALA 639

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG  + A + F++M      PDH+TF++LL ACSH GL++EG  +   M   + +    
Sbjct: 640 RHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGI 699

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EH  C++DLLGRA  L EA  F+  M + PT  VW +LL AC++H N EL    A +L E
Sbjct: 700 EHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFE 759

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LD  +   YVL SNV A++R+W+DVE VR +M    +KK P  SW+++ N++ +F   D+
Sbjct: 760 LDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQ 819

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H ++ EIY KL E+ +K+ RE GY+  T + L + +EE+K   L+ HSER+A+A+G++ 
Sbjct: 820 YHPQNAEIYAKLEEL-KKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLIN 878

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S+EGS +RI KNLRVC DCHS  K+VS++ GR++++RDA RFHHF +G CSC DYW
Sbjct: 879 SSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  285 bits (730), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 177/653 (27%), Positives = 335/653 (51%), Gaps = 21/653 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K GS+  A+ +FDK+ +R   +WN ++  +V  G   + ++ +  M   G+   ++ 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 61  FPCVIKACAMLKDLDCGA-KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              ++ AC     +  GA ++H  V+KCG     F+  SL+  Y       +   +F  +
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E+ ++V W S++  Y+ +G   E + ++R ++R G+  N       +++C     + LG
Sbjct: 121 -EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++  + +KSG +  V VAN+LI+M+  C  + EA+ V   ++ +D++SWNS++T  V N
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               K++++F +++    K D +     +   G   NL  G+ LH   +K G  S++ + 
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+ MY++         VF++M  +D ISW +++A +  N  + +ALEL   +      
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            + +   + L AC  L+ +   K +H ++I  GL  +L+I NA+V +YGK G++  ++ V
Sbjct: 360 TNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRV 416

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSI 477
            + +  +D V+W ++I  +  N   N A+E F L+ E  V  + IT+V+ LSA  S   +
Sbjct: 417 CKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDL 476

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L  G  ++  I+  GF LE  V SSL+ MYA+CG L+ +N +F+ +  K+   W ++++A
Sbjct: 477 LDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSA 536

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM------RC 591
           N  +G G+ A+ L  KM  +    D  +F        +  L++EG++   ++        
Sbjct: 537 NAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESN 596

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
           DY L+         +D+ G+   +++ ++ +   +   +   W  L+ A   H
Sbjct: 597 DYVLN-------ATMDMYGKCGEIDDVFRILPQPR-SRSQRSWNILISALARH 641



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 162/565 (28%), Positives = 286/565 (50%), Gaps = 15/565 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+G C S+ +A  +FD + +R   +WN+++ A V NG   + LE +S+MR      D  T
Sbjct: 204 MFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYIT 263

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++  C   ++L  G  +HG+V+K G +S   + NSL++MY++      A  +F +M 
Sbjct: 264 ISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMR 323

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D++ WNS+++++  +G    AL L  EM +    TN  TF  AL AC +   ETL +
Sbjct: 324 ER-DLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYN--LETLKI 380

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +  G +  + + NAL+ MY + G M  A  V   + ++D V+WN+++ G   N 
Sbjct: 381 -VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNK 439

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIG 299
               A++ F  L+  G   + +  VN +SA     +LL+ G  +HA+ +  GF  +  + 
Sbjct: 440 EPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQ 499

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           ++L+ MYA+C  +N    +F  +  ++  +W  I++  A      +AL+L   ++ +G+ 
Sbjct: 500 SSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIH 559

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D             L  + + +++H  II+ G  S+  +LNA +D+YGKCG ID    +
Sbjct: 560 LDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRI 619

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
                S+   SW  +IS+   +G   +A E F+ M +  +  D +T VS LSA S   ++
Sbjct: 620 LPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLV 679

Query: 479 KKGKELNGFIIRKGFNLEGSVAS--SLVDMYARCGALDIANKVFN--CVQTKDLILWTSM 534
            +G      +  K F +   +     ++D+  R G L  A    N   V   DL+ W S+
Sbjct: 680 DEGLAYFSSMSTK-FGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLV-WRSL 737

Query: 535 INANGLHGR---GKVAIDLFYKMEA 556
           + A  +HG     + A D  +++++
Sbjct: 738 LAACKIHGNLELARKAADRLFELDS 762


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 295/798 (36%), Positives = 460/798 (57%), Gaps = 61/798 (7%)

Query: 95  IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW-NSIISAYSASGQCLEALGLFREMQR 153
           +  +L+  Y        A  L +R+      V W N +I      G   +   L+R+M+ 
Sbjct: 193 LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKS 252

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
           +G   + YTF    +AC + S  +LG  +HA   +SG    V+V NA+++MY +CG +  
Sbjct: 253 LGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRH 312

Query: 214 AAGVLYQLENK---DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG-QKPDQVCTVNAVS 269
           A  +   L ++   D VSWNS+++ ++       A+  F ++       PD +  VN + 
Sbjct: 313 AHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILP 372

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A   L   L G+++H ++I+ G V D+ +GN ++DMYAKC  +    +VF +M  +D +S
Sbjct: 373 ACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVS 432

Query: 330 W-----------------------------------TTIIAGYAQNNCHLKALELFRTVQ 354
           W                                   T +I GYAQ     +AL++FR + 
Sbjct: 433 WNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMC 492

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR---------KGLSDLVILNAIVDV 405
             G   +V+ + S+L AC  +  +   KE H Y I+          G  DL ++N ++D+
Sbjct: 493 DCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDM 552

Query: 406 YGKCGNIDYSRNVFESIESKD--VVSWTSMISSYVHNGLANEALELFYLM--NEANVESD 461
           Y KC + + +R +F+S+  KD  VV+WT MI  Y  +G AN AL+LF  M   + +++ +
Sbjct: 553 YAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPN 612

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV----ASSLVDMYARCGALDIAN 517
             TL  AL A + L+ L+ G++++ +++R   N  GSV    A+ L+DMY++ G +D A 
Sbjct: 613 DFTLSCALVACARLAALRFGRQVHAYVLR---NFYGSVMLFVANCLIDMYSKSGDVDTAQ 669

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            VF+ +  ++ + WTS++   G+HGRG+ A+ +F +M      PD ITFL +LYACSHSG
Sbjct: 670 IVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSG 729

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           +++ G  F   M  D+ +DP PEHYAC+VDL GRA  L EA + +  M +EPT  VW AL
Sbjct: 730 MVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVAL 789

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           L ACR+HSN ELGE  A +LLEL+ GN G+Y L+SN++A +R+WKDV ++R  M+ +G+K
Sbjct: 790 LSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIK 849

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K PG SWI+    + +F   D+SH +S +IY+ LA++ +++ +  GYV QT F LH+V++
Sbjct: 850 KRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRI-KAIGYVPQTSFALHDVDD 908

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           EEK  +L+ HSE+LA+AYG+L     + IRITKNLR+C DCHS    +S++   E+++RD
Sbjct: 909 EEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRD 968

Query: 818 ANRFHHFEAGVCSCGDYW 835
           ++RFHHF+ G CSC  YW
Sbjct: 969 SSRFHHFKNGSCSCKGYW 986



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 190/613 (30%), Positives = 316/613 (51%), Gaps = 63/613 (10%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
           S  +VF WN ++   +  G P  V   Y +M+ LG + D +TFP V KACA L  L  GA
Sbjct: 220 SPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGA 279

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK--EDVVLWNSIISAYS 136
            +H  V + G+ S  F+ N++V+MY KC   R A  +FD +  +  +D+V WNS++SAY 
Sbjct: 280 SLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYM 339

Query: 137 ASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
            +     AL LF +M    L++ +  + V  L AC   +    G ++H  +++SG    V
Sbjct: 340 WASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDV 399

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM----------------------- 232
           +V NA++ MYA+CGKM EA  V  +++ KD VSWN+M                       
Sbjct: 400 FVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEE 459

Query: 233 ------------LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
                       +TG+ Q    C+A+  FR++   G +P+ V  V+ +SA   +G LL+G
Sbjct: 460 NIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHG 519

Query: 281 KELHAYAIK--------QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ--DFISW 330
           KE H YAIK             DL++ N L+DMYAKC       ++F  ++ +  D ++W
Sbjct: 520 KETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTW 579

Query: 331 TTIIAGYAQNNCHLKALELFRTV--QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           T +I GYAQ+     AL+LF  +    + +  +   +   L+AC+ L  +   +++H Y+
Sbjct: 580 TVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYV 639

Query: 389 IRK--GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           +R   G   L + N ++D+Y K G++D ++ VF+++  ++ VSWTS+++ Y  +G   +A
Sbjct: 640 LRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDA 699

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF-IIRKGFNLEGSVA--SSL 503
           L +F  M +  +  D IT +  L A S   ++  G  +N F  + K F ++      + +
Sbjct: 700 LRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHG--INFFNRMSKDFGVDPGPEHYACM 757

Query: 504 VDMYARCGALDIANKVFNCVQTKDL-ILWTSMINANGLHGR---GKVAIDLFYKMEAESF 559
           VD++ R G L  A K+ N +  +   ++W ++++A  LH     G+ A +    +E ES 
Sbjct: 758 VDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRL--LELESG 815

Query: 560 APDHITFLALLYA 572
                T L+ +YA
Sbjct: 816 NDGSYTLLSNIYA 828



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 235/516 (45%), Gaps = 73/516 (14%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTV---FTWNAMLGAYVSNGEPLRVLETYSRMRVLGI-SV 56
           MYGKCG++  A  +FD +  R +    +WN+++ AY+   +    L  + +M    + S 
Sbjct: 303 MYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSP 362

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D  +   ++ ACA L     G ++HG  ++ G     F+ N++V MYAKC    +A ++F
Sbjct: 363 DVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVF 422

Query: 117 DRMGEKE----------------------------------DVVLWNSIISAYSASGQCL 142
            RM  K+                                  DVV W ++I+ Y+  GQ  
Sbjct: 423 QRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGC 482

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL--------Q 194
           EAL +FR+M   G   N  T V+ L AC        G E H   +K   NL         
Sbjct: 483 EALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADD 542

Query: 195 VYVANALIAMYARCGKMTEAAGVLY---QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
           + V N LI MYA+C + TE A  ++     +++D V+W  M+ G+ Q+     A+Q F  
Sbjct: 543 LKVINGLIDMYAKC-QSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSG 601

Query: 252 LQGAGQ--KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS-DLQIGNTLMDMYAK 308
           +    +  KP+      A+ A  RL  L  G+++HAY ++  + S  L + N L+DMY+K
Sbjct: 602 MFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSK 661

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
              V+    VF  M  ++ +SWT+++ GY  +     AL +F  ++   L  D +    V
Sbjct: 662 SGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVV 721

Query: 369 LMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES 421
           L ACS       G+   ++  +  G  +  G      +   VD++G+ G +  +  +   
Sbjct: 722 LYACSHSGMVDHGINFFNRMSKDFG--VDPGPEHYACM---VDLWGRAGRLGEAMKLINE 776

Query: 422 IESKDV-VSWTSMISS-YVHNGL------ANEALEL 449
           +  +   V W +++S+  +H+ +      AN  LEL
Sbjct: 777 MPMEPTPVVWVALLSACRLHSNVELGEFAANRLLEL 812



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 174/339 (51%), Gaps = 14/339 (4%)

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
           C    ++A     +L + K LH  +I QG +    +   L+  Y       Y   +  ++
Sbjct: 160 CATIPITALKECNSLAHAKLLHQQSIMQGLL--FHLATNLIGTYIASNSTAYAILLLERL 217

Query: 323 --TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
             +      W  +I              L+R ++  G   D      V  AC+ L  +S 
Sbjct: 218 PPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSL 277

Query: 381 TKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK---DVVSWTSMISS 436
              +H  + R G  S++ + NA+V +YGKCG + ++ N+F+ +  +   D+VSW S++S+
Sbjct: 278 GASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSA 337

Query: 437 YVHNGLANEALELFYLMNEANVES-DSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
           Y+    AN AL LF+ M   ++ S D I+LV+ L A +SL+   +G++++GF IR G   
Sbjct: 338 YMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVD 397

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  V +++VDMYA+CG ++ ANKVF  ++ KD++ W +M+      GR + A+ LF +M 
Sbjct: 398 DVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMT 457

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMR--CD 592
            E+   D +T+ A++   +  G   +G + L++ R  CD
Sbjct: 458 EENIELDVVTWTAVITGYAQRG---QGCEALDVFRQMCD 493


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 297/838 (35%), Positives = 475/838 (56%), Gaps = 8/838 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
             YG  GSV +A +LF+++ +  + +W +++  Y  NG    VL  Y  +R  G+     T
Sbjct: 293  FYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNT 352

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF-IVNSLVAMYAKCYDFRKARQLFDRM 119
               VI+ C M  D   G +I G V+K G D++   + NSL++M+       +A ++F+ M
Sbjct: 353  MATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNM 412

Query: 120  GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             E+ D + WNSII+A + +G+  E+LG F  M+R    T+  T  A L AC  +     G
Sbjct: 413  QER-DTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWG 471

Query: 180  MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
              +H    KSG    V V N+L++MYA+ G   +A  V + +  +D +SWNSM+   V++
Sbjct: 472  RGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVED 531

Query: 240  DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              Y  A+    E+    +  + V    A+SA   L  L   K +HA+ I      +L IG
Sbjct: 532  GKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIG 588

Query: 300  NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            NTL+ MY K   ++   +V   M  +D ++W  +I G+A +      ++ F  ++ EGL 
Sbjct: 589  NTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLL 648

Query: 360  ADVMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
            ++ + I ++L  C S    +     IH +I+  G   D  + ++++ +Y +CG+++ S  
Sbjct: 649  SNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSY 708

Query: 418  VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            +F+ + +K+  +W ++ S+  H G   EAL+    M    V+ D  +   AL+   +L++
Sbjct: 709  IFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTV 768

Query: 478  LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
            L +G++L+ +II+ GF L+  V ++ +DMY +CG +D   ++    + +    W  +I+A
Sbjct: 769  LDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISA 828

Query: 538  NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
               HG  + A + F++M      PDH+TF++LL ACSH GL++EG  +   M  ++ +  
Sbjct: 829  LARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPT 888

Query: 598  WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
              EH  C++DLLGR+  L EA  F+  M + P   VW +LL AC+VH N ELG   A +L
Sbjct: 889  AIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRL 948

Query: 658  LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
             EL+  +   YVL SNV A++++W DVE VR +M    LKK P  SWI++ NK+ +F   
Sbjct: 949  FELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMG 1008

Query: 718  DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
            D+ H +S +IY KL E+  K+ RE G++  T + L + +EE+K   L+ HSER+A+A+G+
Sbjct: 1009 DQFHPQSAQIYAKLEEL-RKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGL 1067

Query: 778  LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            + S EGS +RI KNLRVC DCHS  KLVS++ GR++VVRD+ RFHHF  G CSC DYW
Sbjct: 1068 INSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 173/649 (26%), Positives = 333/649 (51%), Gaps = 12/649 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K GS+  A+ +FDK+  R   +WN M+  +V  G   + ++ +  M   G++  ++ 
Sbjct: 191 MYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYV 250

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              ++ AC     +  GA+ IHG V+KCG  S  F+  SL+  Y       +A +LF+ +
Sbjct: 251 IASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEI 310

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E+ ++V W S++  Y+ +G   E L ++R ++  GL+    T    ++ C     +T+G
Sbjct: 311 -EEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMG 369

Query: 180 MEIHAATVKSGQNL-QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            +I    +KSG +   V VAN+LI+M+     + EA+ V   ++ +D++SWNS++T    
Sbjct: 370 YQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAH 429

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N  + +++  F  ++    K D +     + A G   +L  G+ LH    K G  S++ +
Sbjct: 430 NGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCV 489

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N+L+ MYA+         VF+ M A+D ISW +++A + ++  +  A+ L   +     
Sbjct: 490 CNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRK 549

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             + +   + L AC  L+   + K +H ++I   +  +L+I N +V +YGK G +D ++ 
Sbjct: 550 AMNYVTFTTALSACYNLE---KLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQK 606

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS- 476
           V + +  +DVV+W ++I  +  +   N  ++ F LM    + S+ IT+V+ L    S   
Sbjct: 607 VCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDY 666

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           +LK G  ++  I+  GF L+  V SSL+ MYA+CG L+ ++ +F+ +  K+   W ++ +
Sbjct: 667 LLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFS 726

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQL 595
           AN  +G G+ A+    +M  +    D  +F   L    +  +++EG++    I++  ++L
Sbjct: 727 ANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFEL 786

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
           D +       +D+ G+   +++ ++ +   +I  +   W  L+ A   H
Sbjct: 787 DEYV--LNATMDMYGKCGEIDDVFRILPIPKIR-SKRSWNILISALARH 832



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 150/584 (25%), Positives = 280/584 (47%), Gaps = 20/584 (3%)

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           K  + + + + G  +H L +K       F  N+LV MY+K    + A+ +FD+M ++ D 
Sbjct: 155 KGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDA 214

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM-EIHA 184
             WN++IS +   G   +A+  F  M   G+  ++Y   + + AC+ S   T G  +IH 
Sbjct: 215 S-WNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHG 273

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             VK G    V+V  +L+  Y   G ++EA  +  ++E  + VSW S++  +  N    +
Sbjct: 274 YVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKE 333

Query: 245 AMQFFRELQGAGQKPDQVCTVNA----VSASGRLGNLLNGKELHAYAIKQGF-VSDLQIG 299
            +  +R L+  G     +CT N     +   G  G+   G ++    IK G   S + + 
Sbjct: 334 VLNIYRHLRHNG----LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVA 389

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+ M+     V    RVF  M  +D ISW +II   A N    ++L  F  ++     
Sbjct: 390 NSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPK 449

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D + I ++L AC   + +   + +HG I + GL S++ + N+++ +Y + G+ + +  V
Sbjct: 450 TDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELV 509

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F ++ ++D++SW SM++S+V +G  + A+ L   M +     + +T  +ALSA  +   L
Sbjct: 510 FHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN---L 566

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           +K K ++ F+I    +    + ++LV MY + G +D A KV   +  +D++ W ++I  +
Sbjct: 567 EKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGH 626

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC-SHSGLINEGKKF-LEIMRCDYQLD 596
                    I  F  M  E    ++IT + LL  C S   L+  G      I+   ++LD
Sbjct: 627 ADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELD 686

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            + +  + L+ +  +   L  +  ++  +     +  W A+  A
Sbjct: 687 TYVQ--SSLITMYAQCGDLNTS-SYIFDVLANKNSSTWNAIFSA 727



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 252/504 (50%), Gaps = 12/504 (2%)

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           +G  +HA  VK       +  N L+ MY++ G +  A  V  ++ +++  SWN+M++GFV
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDL 296
           +   Y KAMQFF  +   G  P      + V+A  R G +  G +++H Y +K G +S++
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +G +L+  Y     V+   ++F ++   + +SWT+++  YA N    + L ++R ++  
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDY 414
           GL      + +V+  C      +   +I G +I+ GL  S + + N+++ ++G   +++ 
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEE 404

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +  VF +++ +D +SW S+I++  HNG   E+L  F+ M   + ++D IT+ + L A  S
Sbjct: 405 ASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGS 464

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
              LK G+ L+G I + G      V +SL+ MYA+ G+ + A  VF+ +  +DLI W SM
Sbjct: 465 AQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSM 524

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           + ++   G+   AI L  +M     A +++TF   L AC +   +     F+      + 
Sbjct: 525 MASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIHFAVHHN 584

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS-NKELGEIV 653
           L         LV + G+   ++EA +  + M  E     W AL+G    H+ +K+    +
Sbjct: 585 LIIG----NTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALIGG---HADDKDPNATI 636

Query: 654 AKKLLELDPGNPGNYVLISNVFAA 677
               L    G   NY+ I N+   
Sbjct: 637 QAFNLMRREGLLSNYITIVNLLGT 660


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 287/809 (35%), Positives = 473/809 (58%), Gaps = 8/809 (0%)

Query: 34  VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD 93
           ++NG   + + T   M   G   D  T+   +K C   +  D G  +H  + +       
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
             +NSL+++Y+KC  + KA  +F  MG   D++ W++++S ++ +     AL  F +M  
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARC-GKM 211
            G   N Y F AA +AC  + F ++G  I    VK+G     V V   LI M+ +  G +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  V  ++  +++V+W  M+T  +Q     +A+  F E+  +G +PD+      +SA 
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISAC 281

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM---GRVFYQMTAQDFI 328
             +  LL G++LH+ AI+ G   D  +G  L++MYAKC     M    ++F Q+   +  
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341

Query: 329 SWTTIIAGYAQNNCH-LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           SWT +I GY Q   +  +AL+LFR + L  +  +     S L AC+ L  +   +++  +
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401

Query: 388 IIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            ++ G S +  + N+++ +Y + G ID +R  F+ +  K+++S+ ++I +Y  N  + EA
Sbjct: 402 AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEA 461

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           LELF  + +  + + + T  S LS A+S+  + KG++++  +I+ G  L  SV ++L+ M
Sbjct: 462 LELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISM 521

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y+RCG ++ A +VF  ++ +++I WTS+I     HG    A++LF+KM  E   P+ +T+
Sbjct: 522 YSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTY 581

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           +A+L ACSH GL+NEG K  + M  ++ + P  EHYAC+VD+LGR+  L EA QF+ SM 
Sbjct: 582 IAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMP 641

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
            +  A VW   LGACRVH N ELG+  AK ++E +P +P  Y+L+SN++A++ KW +V  
Sbjct: 642 YKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSN 701

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           +R  M+   L K  G SW+E+ NK+H F   D SH ++ EIY +L  ++ K+++  GYV 
Sbjct: 702 IRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKL-GYVP 760

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
              FVLH+VEEE+K ++L+ HSE++A+A+G++ +++   IR+ KNLR+C DCHS  K +S
Sbjct: 761 NLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYIS 820

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
              GRE++VRDANRFHH + G CSC +YW
Sbjct: 821 MATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 173/587 (29%), Positives = 298/587 (50%), Gaps = 16/587 (2%)

Query: 1   MYGKCGSVLDAEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           +Y KCG    A  +F  + S R + +W+AM+  + +N    R L T+  M   G   + +
Sbjct: 110 LYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEY 169

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN-SLVAMYAKCY-DFRKARQLFD 117
            F    +AC+  + +  G  I G V+K GY  +D  V   L+ M+ K   D   A ++F+
Sbjct: 170 CFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFE 229

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           +M E+ + V W  +I+     G   EA+ LF EM   G   + +T    + AC +     
Sbjct: 230 KMPER-NAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLL 288

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARC---GKMTEAAGVLYQLENKDSVSWNSMLT 234
           LG ++H+  ++ G  L   V   LI MYA+C   G M  A  +  Q+ + +  SW +M+T
Sbjct: 289 LGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMIT 348

Query: 235 GFVQNDLYC-KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           G+VQ   Y  +A+  FR +      P+     + + A   L  L  G+++  +A+K GF 
Sbjct: 349 GYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFS 408

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S   + N+L+ MYA+   ++   + F  +  ++ IS+ T+I  YA+N    +ALELF  +
Sbjct: 409 SVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
           + +G+ A      S+L   + +  + + ++IH  +I+ GL  +  + NA++ +Y +CGNI
Sbjct: 469 EDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNI 528

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + +  VFE +E ++V+SWTS+I+ +  +G A +ALELF+ M E  V  + +T ++ LSA 
Sbjct: 529 ESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSAC 588

Query: 473 SSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLIL 530
           S + ++ +G K         G        + +VD+  R G+L  A +  N +  K D ++
Sbjct: 589 SHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALV 648

Query: 531 WTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           W + + A  +HG    GK A  +   +E E   P     L+ LYA +
Sbjct: 649 WRTFLGACRVHGNLELGKHAAKMI--IEQEPHDPAAYILLSNLYAST 693


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 294/761 (38%), Positives = 460/761 (60%), Gaps = 9/761 (1%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H L++  G   + F+   L+  YA   D   AR  FD++ + +DV  WNS+ISAY+  
Sbjct: 61  QLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQI-QTKDVYTWNSMISAYARI 119

Query: 139 GQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
           G    A+  F E      L ++ YTF   ++AC +      G ++H   +K G    VY+
Sbjct: 120 GHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLD---DGRKVHCLVLKLGFECDVYI 176

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
           A + I  Y+R G ++ A  +   +  +D  +WN+M++GF  N    +A++ F E++    
Sbjct: 177 AASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSV 236

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
             D V   + +    +L ++++G  +H YAIK G   DL + N L++MYAK   +     
Sbjct: 237 SMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAET 296

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           +F QM  +D +SW +++A + QN   + AL ++  +   G+  D++ + S+    + L  
Sbjct: 297 IFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGN 356

Query: 378 MSQTKEIHGYIIRK--GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
              ++ IHG++ R+   L D+ + NAI+D+Y K G ID +R VFE +  KDV+SW S+I+
Sbjct: 357 FLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLIT 416

Query: 436 SYVHNGLANEALELFYLMNE-ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
            Y  NGLANEA++++  M   +    +  T VS L+A S L  LK+G + +G +I+    
Sbjct: 417 GYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLY 476

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            +  V++ LVDMY +CG L  A  +F  V  +  + W ++I+ +GLHG G  A+ LF +M
Sbjct: 477 FDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEM 536

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
           ++E   PDHITF++LL ACSHSGL++EG+   ++M+  Y + P  +HY C+VDL GRA H
Sbjct: 537 QSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGH 596

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNV 674
           LE+A+ FV++M + P   VW ALLGACR+H N EL   V+  LL+++  N G YVL+SN+
Sbjct: 597 LEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNI 656

Query: 675 FAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
           +A    W+ V++VR   R  GLKKTPG S IE+  KI  F   +++H + +EIY +L  +
Sbjct: 657 YAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNL 716

Query: 735 TEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRV 794
           T K+ +  GYV    FVL +VE++EK  +L  HSERLA+A+G++ +   + ++I KNLRV
Sbjct: 717 TAKM-KSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRV 775

Query: 795 CVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           C DCH+  K +S++  RE++VRD+NRFHHF+ GVCSCGDYW
Sbjct: 776 CGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 167/547 (30%), Positives = 294/547 (53%), Gaps = 12/547 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAFT 60
           Y   G +  A   FD++  + V+TWN+M+ AY   G     ++ ++  +    +  D +T
Sbjct: 85  YAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYT 144

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP VI+AC    +LD G K+H LVLK G++   +I  S +  Y++      A  LFD M 
Sbjct: 145 FPPVIRACG---NLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMM 201

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+  WN++IS +  +G+  EAL +F EM+   +  ++ T  + L  C        G+
Sbjct: 202 IR-DIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGV 260

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +K G    ++V NALI MYA+ G++  A  +  Q++ +D VSWNS+L  F QN 
Sbjct: 261 LIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNK 320

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIG 299
               A+  + ++   G  PD +  V+  S +  LGN L+ + +H +  ++  F+ D+ +G
Sbjct: 321 KPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALG 380

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-LEGL 358
           N ++DMYAK   ++   +VF  +  +D ISW ++I GY+QN    +A++++ +++   G 
Sbjct: 381 NAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGA 440

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             +     S+L A S L  + Q  + HG +I+  L  D+ +   +VD+YGKCG +  + +
Sbjct: 441 VPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALS 500

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  +  +  VSW ++IS +  +G   +A++LF  M    V+ D IT VS LSA S   +
Sbjct: 501 LFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGL 560

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSM 534
           + +G+     ++++ + +  S+     +VD++ R G L+ A N V N     D+ +W ++
Sbjct: 561 VDEGQWCFQ-LMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGAL 619

Query: 535 INANGLH 541
           + A  +H
Sbjct: 620 LGACRIH 626



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 242/472 (51%), Gaps = 11/472 (2%)

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           L  ++HA  V SG+   ++++  LI  YA  G +  A     Q++ KD  +WNSM++ + 
Sbjct: 58  LAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYA 117

Query: 238 QNDLYCKAMQFFRE-LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           +   +  A+  F E L  +  + D       + A    GNL +G+++H   +K GF  D+
Sbjct: 118 RIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDV 174

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            I  + +  Y++   V+    +F  M  +D  +W  +I+G+  N    +ALE+F  ++ +
Sbjct: 175 YIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFK 234

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
            +  D + I S+L  C  L  +     IH Y I+ GL  DL + NA++++Y K G +  +
Sbjct: 235 SVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSA 294

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             +F  ++ +D+VSW S+++++  N     AL ++  M+   V  D +TLVS  S A+ L
Sbjct: 295 ETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAEL 354

Query: 476 SILKKGKELNGFIIRKGFNLEG-SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
                 + ++GF+ R+ + L   ++ ++++DMYA+ G +D A KVF  +  KD+I W S+
Sbjct: 355 GNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSL 414

Query: 535 INANGLHGRGKVAIDLFYKMEAESFA-PDHITFLALLYACSHSGLINEG-KKFLEIMRCD 592
           I     +G    AID++  M   S A P+  T++++L A S  G + +G K   ++++  
Sbjct: 415 ITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNF 474

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
              D +     CLVD+ G+   L +A      +  + +   W A++    +H
Sbjct: 475 LYFDIFVS--TCLVDMYGKCGKLADALSLFYEVPHQSSVS-WNAIISCHGLH 523



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 222/473 (46%), Gaps = 57/473 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  AE +F+++  R + +WN++L A+  N +P+  L  Y++M  +G+  D  T
Sbjct: 284 MYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLT 343

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVL-KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              +    A L +      IHG V  +C +     + N+++ MYAK      AR++F+ +
Sbjct: 344 LVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGL 403

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETL 178
             K DV+ WNS+I+ YS +G   EA+ ++  M+   G V N  T+V+ L A         
Sbjct: 404 PVK-DVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQ 462

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           GM+ H   +K+     ++V+  L+ MY +CGK+ +A  + Y++ ++ SVSWN++++    
Sbjct: 463 GMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGL 522

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK-----ELHAYAIKQGFV 293
           +    KA++ F+E+Q  G KPD +  V+ +SA    G +  G+         Y I+    
Sbjct: 523 HGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPS-- 580

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
                    +  Y   C V+  GR                 AG+ +     KA    + +
Sbjct: 581 ---------LKHYG--CMVDLFGR-----------------AGHLE-----KAFNFVKNM 607

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN-- 411
            +     DV + G++L AC   + +   + +  ++++    ++     + ++Y K G+  
Sbjct: 608 PVR---PDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWE 664

Query: 412 -IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
            +D  R++      K    W+S+          ++ +++FY  N+ + + + I
Sbjct: 665 GVDEVRSLARDRGLKKTPGWSSI--------EVDKKIDVFYTGNQTHPKCEEI 709


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 302/828 (36%), Positives = 465/828 (56%), Gaps = 9/828 (1%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A QLFD+   + +  +N +L  +  N      L  +  +   G+ VD  T  C +K C +
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L D   G ++H   LK G+     +  SLV MY K  DF   R +FD MG K +VV W S
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIK-NVVSWTS 175

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           ++S Y+ +G   E + L  +MQ  G+  N +TF   L A  D S    G+++HA  VK+G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
                +V NALI MY +   + +A  V   +  +DSV+WN M+ G+     Y +  Q F 
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            ++ AG K  +     A+    +   L   K+LH   +K G+     I   LM  Y+KC 
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355

Query: 311 CVNYMGRVFYQM-TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
            V+   ++F     A + ++WT +I G+ QNN + KA++LF  +  EG+  +     +VL
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL 415

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
                 K  S   ++H  II+     +  +  A++D Y K GN+  S  VF SI +KD+V
Sbjct: 416 AG----KPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIV 471

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILKKGKELNGF 487
           +W++M++       + +A+E+F  + +  V+ +  T  S ++A +SS + ++ GK+++  
Sbjct: 472 AWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT 531

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
            ++ G +    V+S+L+ MY++ G ++ A KVF   + +D++ W SMI   G HG  K A
Sbjct: 532 AVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKA 591

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           +++F  M+ +    D +TF+ +L AC+H+GL+ EG+K+  IM  DY +D   EHY+C+VD
Sbjct: 592 LEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVD 651

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
           L  RA   ++A   +  M    +  +W  LL ACRVH N ELG++ A+KL+ L P +   
Sbjct: 652 LYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVG 711

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
           YVL+SN+ A +  W++   VR  M    +KK  G SWIEI N+I SF+A D SH  SD +
Sbjct: 712 YVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLV 771

Query: 728 YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIR 787
           Y KL E++ KL ++ GY   T +V H+VEEE K  +L  HSERLAIAYG++    G+ I+
Sbjct: 772 YAKLEELSIKL-KDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQ 830

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           I KNLR+C DCH+  +L+S +  R L+VRD+NRFHHF+ GVCSCG YW
Sbjct: 831 IEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 162/547 (29%), Positives = 285/547 (52%), Gaps = 12/547 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K     D   +FD++  + V +W ++L  Y  NG    V+   ++M++ G++ + FT
Sbjct: 148 MYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFT 207

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ A A    ++ G ++H +++K G++ T F+ N+L+ MY K      A  +FD M 
Sbjct: 208 FATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMV 267

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V WN +I  Y+A G  LE   +F  M+  G+  +   F  AL+ C          
Sbjct: 268 VR-DSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTK 326

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQN 239
           ++H   VK+G      +  AL+  Y++C  + EA  +    +   + V+W +M+ GFVQN
Sbjct: 327 QLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQN 386

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +   KA+  F ++   G +P+   T + V A G+  +LL+  +LHA  IK  +     + 
Sbjct: 387 NNNKKAVDLFCQMSREGVRPNHF-TYSTVLA-GKPSSLLS--QLHAQIIKAYYEKVPSVA 442

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+D Y K   V    RVFY + A+D ++W+ ++ G AQ     KA+E+F  +  EG+ 
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVK 502

Query: 360 ADVMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRN 417
            +     SV+ AC S    +   K+IH   ++ G S+ L + +A++ +Y K GNI+ +  
Sbjct: 503 PNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEK 562

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF   E +D+VSW SMI+ Y  +G A +ALE+F +M    +  D +T +  L+A +   +
Sbjct: 563 VFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGL 622

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSM 534
           +++G++    +I K ++++      S +VD+Y+R G  D A  + N +       +W ++
Sbjct: 623 VEEGEKYFNIMI-KDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681

Query: 535 INANGLH 541
           + A  +H
Sbjct: 682 LAACRVH 688



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 228/449 (50%), Gaps = 13/449 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   V DAE +FD +  R   TWN M+G Y + G  L   + + RMR+ G+ +    
Sbjct: 249 MYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTV 308

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +K C+  ++L+   ++H  V+K GY+    I  +L+  Y+KC    +A +LF    
Sbjct: 309 FCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMAD 368

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              +VV W ++I  +  +    +A+ LF +M R G+  N +T+   L     S    L  
Sbjct: 369 AAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS----LLS 424

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +K+       VA AL+  Y + G + E+A V Y +  KD V+W++MLTG  Q  
Sbjct: 425 QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTR 484

Query: 241 LYCKAMQFFRELQGAGQKPDQVC---TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
              KAM+ F +L   G KP++      +NA S+S     + +GK++HA A+K G  + L 
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSA--ATVEHGKQIHATAVKSGKSNALC 542

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + + L+ MY+K   +    +VF +   +D +SW ++I GY Q+    KALE+F+ +Q +G
Sbjct: 543 VSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQG 602

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYS 415
           L  D +    VL AC+    + + ++    +I+    D      + +VD+Y + G  D +
Sbjct: 603 LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKA 662

Query: 416 RNVFESIE-SKDVVSWTSMISS-YVHNGL 442
            ++   +        W +++++  VH  L
Sbjct: 663 MDIINGMPFPASPTIWRTLLAACRVHRNL 691



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 24/347 (6%)

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           Y  ++F +   +D   +  ++  +++NN   +AL LF+ +   GL  D + +   L  C 
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115

Query: 374 GLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L      +++H   ++ G L D+ +  ++VD+Y K  + +  R +F+ +  K+VVSWTS
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           ++S Y  NGL +E + L   M    V  +  T  + L A +  SI++ G +++  I++ G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           F     V ++L+ MY +   +  A  VF+ +  +D + W  MI      G       +F+
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 553 KMEAESFAPDHITFLALLYACS-----------HSGLINEGKKFLEIMRCDYQLDPWPEH 601
           +M           F   L  CS           H G++  G +F + +R           
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIR----------- 344

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
              L+    + + ++EA++             W A++G    ++N +
Sbjct: 345 -TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNK 390


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 301/828 (36%), Positives = 474/828 (57%), Gaps = 9/828 (1%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A+QLFD+   R +   N +L  Y    +    L  +  +   G+S D++T  CV+  CA 
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
             +   G ++H   +KCG      + NSLV MY K  + R  R++FD MG++ DVV WNS
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDR-DVVSWNS 173

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +++ YS +    +   LF  MQ  G   + YT    + A  +     +GM+IHA  VK G
Sbjct: 174 LLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLG 233

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
              +  V N+LI+M ++ G + +A  V   +ENKDSVSWNSM+ G V N    +A + F 
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFN 293

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            +Q AG KP      + + +   L  L   + LH   +K G  ++  +   LM    KC 
Sbjct: 294 NMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCK 353

Query: 311 CVNYMGRVFYQMTA-QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
            ++    +F  M   Q  +SWT +I+GY QN    +A+ LF  ++ EG+  +     ++L
Sbjct: 354 EIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL 413

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
                +       EIH  +I+        +  A++D + K GNI  +  VFE IE+KDV+
Sbjct: 414 TVQHAVF----ISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVI 469

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI-LKKGKELNGF 487
           +W++M++ Y   G   EA ++F+ +    ++ +  T  S ++A ++ +  +++GK+ + +
Sbjct: 470 AWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAY 529

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
            I+   N    V+SSLV +YA+ G ++ A+++F   + +DL+ W SMI+    HG+ K A
Sbjct: 530 AIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKA 589

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           +++F +M+  +   D ITF+ ++ AC+H+GL+ +G+ +  IM  D+ ++P  EHY+C++D
Sbjct: 590 LEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMID 649

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
           L  RA  L +A   +  M   P A VW  +L A RVH N ELG++ A+K++ L+P +   
Sbjct: 650 LYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAA 709

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
           YVL+SN++AA+  W +   VR  M    +KK PG SWIE+ NK +SF+A D SH  SD I
Sbjct: 710 YVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHI 769

Query: 728 YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIR 787
           Y KL+E+  +L R+ GY   T +V H++E+E+K  +L  HSERLAIA+G++ +     ++
Sbjct: 770 YSKLSELNTRL-RDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQ 828

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           I KNLRVC DCHSF KLVS +  R +VVRD+NRFHHF+ G+CSCGDYW
Sbjct: 829 IVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 173/570 (30%), Positives = 299/570 (52%), Gaps = 17/570 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G+V D  ++FD++  R V +WN++L  Y  N    +V E +  M+V G   D +T
Sbjct: 146 MYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYT 205

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI A A    +  G +IH LV+K G+++   + NSL++M +K    R AR +FD M 
Sbjct: 206 VSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNM- 264

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E +D V WNS+I+ +  +GQ LEA   F  MQ  G      TF + +++C  +S + LG+
Sbjct: 265 ENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSC--ASLKELGL 322

Query: 181 --EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS-VSWNSMLTGFV 237
              +H  T+KSG +    V  AL+    +C ++ +A  +   +    S VSW +M++G++
Sbjct: 323 VRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYL 382

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN    +A+  F  ++  G KP+       ++      + +   E+HA  IK  +     
Sbjct: 383 QNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQ----HAVFISEIHAEVIKTNYEKSSS 438

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +G  L+D + K   ++   +VF  +  +D I+W+ ++AGYAQ     +A ++F  +  EG
Sbjct: 439 VGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREG 498

Query: 358 LDADVMIIGSVLMACSG-LKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYS 415
           +  +     S++ AC+     + Q K+ H Y I+  L++ L + +++V +Y K GNI+ +
Sbjct: 499 IKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESA 558

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             +F+  + +D+VSW SMIS Y  +G A +ALE+F  M + N+E D+IT +  +SA +  
Sbjct: 559 HEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHA 618

Query: 476 SILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTS 533
            ++ KG+   N  I     N      S ++D+Y+R G L  A  + N +       +W  
Sbjct: 619 GLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRI 678

Query: 534 MINANGLHGR---GKVAIDLFYKMEAESFA 560
           ++ A+ +H     GK+A +    +E +  A
Sbjct: 679 VLAASRVHRNIELGKLAAEKIISLEPQHSA 708



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/308 (20%), Positives = 130/308 (42%), Gaps = 41/308 (13%)

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           +++ +F+    +D+     ++  Y       EAL LF  +  + +  DS T+   LS  +
Sbjct: 54  FAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCA 113

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
                  G++++   ++ G     SV +SLVDMY + G +    +VF+ +  +D++ W S
Sbjct: 114 GSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNS 173

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           ++     +       +LF  M+ E + PD+ T   ++ A ++ G +  G   ++I     
Sbjct: 174 LLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIG---MQIHALVV 230

Query: 594 QLDPWPEHYAC--LVDLLGRANHLE-------------------------------EAYQ 620
           +L    E   C  L+ +L ++  L                                EA++
Sbjct: 231 KLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFE 290

Query: 621 FVRSMQI---EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
              +MQ+   +PT   + +++ +C   S KELG +       L  G   N  +++ +  A
Sbjct: 291 TFNNMQLAGAKPTHATFASVIKSCA--SLKELGLVRVLHCKTLKSGLSTNQNVLTALMVA 348

Query: 678 SRKWKDVE 685
             K K+++
Sbjct: 349 LTKCKEID 356


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 309/844 (36%), Positives = 480/844 (56%), Gaps = 20/844 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC S+ D E++F ++  R   +W  ++ AY  +G+  R +  + RM+  G+  DA T
Sbjct: 71  LYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVT 130

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+KACA L DL  G  IH  +++ G      + N L+ +Y  C     A  LF++M 
Sbjct: 131 FLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM- 189

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+V WN+ I+A + SG    AL LF+ MQ  G+     T V AL  C   +      
Sbjct: 190 -ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVC---ATIRQAQ 245

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH    +SG    + V+ AL + YAR G + +A  V  +   +D VSWN+ML  + Q+ 
Sbjct: 246 AIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHG 305

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F  +   G  P +V  VNA +      +L  G+ +H  A+++G   D+ +GN
Sbjct: 306 HMSEAALLFARMLHEGISPSKVTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGN 362

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY +C        +F ++   + +SW T+IAG +Q     +A+ELF+ +QLEG+  
Sbjct: 363 ALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAP 421

Query: 361 DVMIIGSVLMACSG----LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
                 ++L A +      + M++ +++H  I+  G  S+  I  A+V +Y  CG ID +
Sbjct: 422 VRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEA 481

Query: 416 RNVFE--SIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
              F+  ++E + DVVSW ++ISS   +G    AL  F  M+   V  + IT V+ L A 
Sbjct: 482 AASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDAC 541

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT-KDLILW 531
           +  + L +G+ ++  +   G      VA++L  MY RCG+L+ A ++F  V   +D++++
Sbjct: 542 AGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIF 601

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            +MI A   +G    A+ LF++M+ E   PD  +F+++L ACSH GL +EG +    MR 
Sbjct: 602 NAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQ 661

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
            Y + P  +HYAC VD+LGRA  L +A + +R M ++PT  VW  LLGACR + + + G 
Sbjct: 662 SYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGR 721

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
           +    + ELDPG+   YV++SN+ A + KW +  +VR  M   GL+K  G SWIEI +++
Sbjct: 722 LANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRV 781

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
           H F+A D+SH  S+EIY++L  +  ++ RE GYV  T+ VL  V+E EK ++L  HSERL
Sbjct: 782 HEFVAGDRSHPRSEEIYRELERLHAEI-REIGYVPDTRLVLRKVDEAEKERLLCQHSERL 840

Query: 772 AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           AIA GV+ S+  + +R+ KNLRVC DCH+  K +S++  +E+VVRD +RFHHF  G CSC
Sbjct: 841 AIALGVMSSSTDT-VRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSC 899

Query: 832 GDYW 835
           GDYW
Sbjct: 900 GDYW 903



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 162/585 (27%), Positives = 293/585 (50%), Gaps = 20/585 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++A    + L  G +IH  ++  G +  + + N L+ +Y KC       ++F R+ E  
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLE--EELGNHLLRLYLKCESLGDVEEVFSRL-EVR 91

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D   W +II+AY+  GQ   A+G+F  MQ+ G+  +A TF+A L+AC      + G  IH
Sbjct: 92  DEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH 151

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           A  V+SG   +  +AN L+ +Y  CG +  A  +L++   +D VSWN+ +    Q+    
Sbjct: 152 AWIVESGLKGKSVLANLLLHIYGSCGCVASAM-LLFEKMERDLVSWNAAIAANAQSGDLG 210

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
            A++ F+ +Q  G +P ++  V A++       +   + +H    + G    L +   L 
Sbjct: 211 IALELFQRMQLEGVRPARITLVIALTVC---ATIRQAQAIHFIVRESGLEQTLVVSTALA 267

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
             YA+   +     VF +   +D +SW  ++  YAQ+    +A  LF  +  EG+    +
Sbjct: 268 SAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKV 327

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESI 422
            + +    CS L+     + IHG  + KGL  D+V+ NA++D+Y +CG+ + +R++F+ I
Sbjct: 328 TLVNASTGCSSLRF---GRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI 384

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS----LSIL 478
              + VSW +MI+     G    A+ELF  M    +     T ++ L A +S       +
Sbjct: 385 PC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN---CVQTKDLILWTSMI 535
            +G++L+  I+  G+  E ++ +++V MYA CGA+D A   F         D++ W ++I
Sbjct: 444 AEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAII 503

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           ++   HG GK A+  F +M+    AP+ IT +A+L AC+ +  + EG+   + +R    +
Sbjct: 504 SSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLR-HSGM 562

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           +        L  + GR   LE A +    + +E    ++ A++ A
Sbjct: 563 ESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 283/585 (48%), Gaps = 28/585 (4%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           T     V  L+A  D    + G  IHA  V  G  L+  + N L+ +Y +C  + +   V
Sbjct: 27  TRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLG--LEEELGNHLLRLYLKCESLGDVEEV 84

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             +LE +D  SW +++T + ++    +A+  F  +Q  G + D V  +  + A  RLG+L
Sbjct: 85  FSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDL 144

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+ +HA+ ++ G      + N L+ +Y  C CV     +F +M  +D +SW   IA  
Sbjct: 145 SQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAAN 203

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-L 396
           AQ+     ALELF+ +QLEG+    + +   L  C+ ++   Q + IH  +   GL   L
Sbjct: 204 AQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIR---QAQAIHFIVRESGLEQTL 260

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           V+  A+   Y + G++  ++ VF+    +DVVSW +M+ +Y  +G  +EA  LF  M   
Sbjct: 261 VVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE 320

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +    +TLV+A +  SSL     G+ ++G  + KG + +  + ++L+DMY RCG+ + A
Sbjct: 321 GISPSKVTLVNASTGCSSLRF---GRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEA 377

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS-- 574
             +F  +   + + W +MI  +   G+ K A++LF +M+ E  AP   T+L LL A +  
Sbjct: 378 RHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASN 436

Query: 575 --HSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
              +  + EG+K    I+ C Y  +P       +V +      ++EA    +   +E   
Sbjct: 437 PEEARAMAEGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRH 494

Query: 632 EV--WCALLGACRVHSN--KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
           +V  W A++ +   H +  + LG      L  + P N    V + +  A +    + E V
Sbjct: 495 DVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAP-NQITCVAVLDACAGAAALTEGEIV 553

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
              +R SG++     S + +   + S   R  S   + EI++K+A
Sbjct: 554 HDHLRHSGME-----SNLFVATALASMYGRCGSLESAREIFEKVA 593


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/786 (35%), Positives = 476/786 (60%), Gaps = 8/786 (1%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D  T+  ++K+C   ++   G  +H  +++ G +    ++N+L+++Y+KC D   AR +F
Sbjct: 43  DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 102

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           + MG K D+V W++++S ++ +    +A+  F +M  +G   N Y F A ++AC ++++ 
Sbjct: 103 EGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYA 162

Query: 177 TLGMEIHAATVKSGQ-NLQVYVANALIAMYAR-CGKMTEAAGVLYQLENKDSVSWNSMLT 234
            +G  I+   VK+G     V V   LI M+ +  G +  A  V  ++  ++ V+W  M+T
Sbjct: 163 WVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMIT 222

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            F Q      A+  F +++ +G  PD+    + +SA   LG L  GK+LH+  I+ G   
Sbjct: 223 RFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLAL 282

Query: 295 DLQIGNTLMDMYAKCCC---VNYMGRVFYQMTAQDFISWTTIIAGYAQN-NCHLKALELF 350
           D+ +G +L+DMYAKC     V+   +VF QM   + +SWT II  Y Q+  C  +A+ELF
Sbjct: 283 DVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELF 342

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKC 409
             +    +  +     SVL AC  L      ++++ Y ++ G++ +  + N+++ +Y + 
Sbjct: 343 CKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARS 402

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G ++ +R  F+ +  K++VS+ +++  Y  N  + EA  LF  + +  +   + T  S L
Sbjct: 403 GRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLL 462

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           S A+S+  + KG++++G +++ G+     + ++L+ MY+RCG ++ A +VFN ++ +++I
Sbjct: 463 SGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI 522

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            WTSMI     HG    A+++F+KM      P+ IT++A+L ACSH G+I+EG+K    M
Sbjct: 523 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSM 582

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
             ++ + P  EHYAC+VDLLGR+  L EA +F+ SM +   A VW  LLGACRVH N EL
Sbjct: 583 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTEL 642

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
           G   A+ +LE +P +P  Y+L+SN+ A++ +WKDV ++R  M+   L K  G SWIE+ N
Sbjct: 643 GRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVEN 702

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           ++H F   + SH ++ +IY++L ++  K+ +E GY+  T FVLH++EEE+K Q L+ HSE
Sbjct: 703 RVHRFHVGETSHPQAWQIYQELDQLASKI-KEMGYIPDTDFVLHDIEEEQKEQFLFQHSE 761

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           ++A+A+G++ +++   IRI KNLRVC DCH+  K +S   GRE+VVRD+NRFHH + GVC
Sbjct: 762 KIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVC 821

Query: 830 SCGDYW 835
           SC DYW
Sbjct: 822 SCNDYW 827



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 166/585 (28%), Positives = 309/585 (52%), Gaps = 16/585 (2%)

Query: 1   MYGKCGSVLDAEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           +Y KCG    A  +F+ + ++R + +W+AM+  + +N    + + T+  M  LG   + +
Sbjct: 88  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 147

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN-SLVAMYAK-CYDFRKARQLFD 117
            F  VI+AC+       G  I+G V+K GY   D  V   L+ M+ K   D   A ++FD
Sbjct: 148 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 207

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           +M E+ ++V W  +I+ ++  G   +A+ LF +M+  G V + +T+ + L AC +     
Sbjct: 208 KMPER-NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLA 266

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARC---GKMTEAAGVLYQLENKDSVSWNSMLT 234
           LG ++H+  ++ G  L V V  +L+ MYA+C   G + ++  V  Q+   + +SW +++T
Sbjct: 267 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 326

Query: 235 GFVQN-DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            +VQ+ +   +A++ F ++     +P+     + + A G L +   G+++++YA+K G  
Sbjct: 327 AYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA 386

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S   +GN+L+ MYA+   +    + F  +  ++ +S+  I+ GYA+N    +A  LF  +
Sbjct: 387 SVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 446

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
              G+        S+L   + +  M + ++IHG +++ G  S+  I NA++ +Y +CGNI
Sbjct: 447 ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNI 506

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + +  VF  +E ++V+SWTSMI+ +  +G A  ALE+F+ M E   + + IT V+ LSA 
Sbjct: 507 EAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC 566

Query: 473 SSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLIL 530
           S + ++ +G K  N      G        + +VD+  R G L  A +  N +    D ++
Sbjct: 567 SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV 626

Query: 531 WTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           W +++ A  +HG    G+ A ++   +E E   P     L+ L+A
Sbjct: 627 WRTLLGACRVHGNTELGRHAAEMI--LEQEPDDPAAYILLSNLHA 669



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 250/500 (50%), Gaps = 28/500 (5%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A ++FDK+ +R + TW  M+  +   G     ++ +  M + G   D FT+  V+
Sbjct: 197 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 256

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY---DFRKARQLFDRMGEK 122
            AC  L  L  G ++H  V++ G      +  SLV MYAKC        +R++F++M E 
Sbjct: 257 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE- 315

Query: 123 EDVVLWNSIISAYSASGQC-LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            +V+ W +II+AY  SG+C  EA+ LF +M    +  N ++F + L+AC + S    G +
Sbjct: 316 HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 375

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +++  VK G      V N+LI+MYAR G+M +A      L  K+ VS+N+++ G+ +N  
Sbjct: 376 VYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK 435

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A   F E+   G         + +S +  +G +  G+++H   +K G+ S+  I N 
Sbjct: 436 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 495

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ MY++C  +    +VF +M  ++ ISWT++I G+A++    +ALE+F  +   G   +
Sbjct: 496 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 555

Query: 362 VMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            +   +VL ACS       G K  +   + HG + R     +     +VD+ G+ G +  
Sbjct: 556 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR-----MEHYACMVDLLGRSGLLVE 610

Query: 415 SRNVFESIE-SKDVVSWTSMISS-YVHNG--LANEALELFYLMNEANVESDSITLVSALS 470
           +     S+    D + W +++ +  VH    L   A E+  ++ +   +  +  L+S L 
Sbjct: 611 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEM--ILEQEPDDPAAYILLSNLH 668

Query: 471 AASS-----LSILKKGKELN 485
           A++      + I K  KE N
Sbjct: 669 ASAGQWKDVVKIRKSMKERN 688


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/786 (35%), Positives = 476/786 (60%), Gaps = 8/786 (1%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D  T+  ++K+C   ++   G  +H  +++ G +    ++N+L+++Y+KC D   AR +F
Sbjct: 25  DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 84

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           + MG K D+V W++++S ++ +    +A+  F +M  +G   N Y F A ++AC ++++ 
Sbjct: 85  EGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYA 144

Query: 177 TLGMEIHAATVKSGQ-NLQVYVANALIAMYAR-CGKMTEAAGVLYQLENKDSVSWNSMLT 234
            +G  I+   VK+G     V V   LI M+ +  G +  A  V  ++  ++ V+W  M+T
Sbjct: 145 WVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMIT 204

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            F Q      A+  F +++ +G  PD+    + +SA   LG L  GK+LH+  I+ G   
Sbjct: 205 RFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLAL 264

Query: 295 DLQIGNTLMDMYAKCCC---VNYMGRVFYQMTAQDFISWTTIIAGYAQN-NCHLKALELF 350
           D+ +G +L+DMYAKC     V+   +VF QM   + +SWT II  Y Q+  C  +A+ELF
Sbjct: 265 DVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELF 324

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKC 409
             +    +  +     SVL AC  L      ++++ Y ++ G++ +  + N+++ +Y + 
Sbjct: 325 CKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARS 384

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G ++ +R  F+ +  K++VS+ +++  Y  N  + EA  LF  + +  +   + T  S L
Sbjct: 385 GRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLL 444

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           S A+S+  + KG++++G +++ G+     + ++L+ MY+RCG ++ A +VFN ++ +++I
Sbjct: 445 SGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI 504

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            WTSMI     HG    A+++F+KM      P+ IT++A+L ACSH G+I+EG+K    M
Sbjct: 505 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSM 564

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
             ++ + P  EHYAC+VDLLGR+  L EA +F+ SM +   A VW  LLGACRVH N EL
Sbjct: 565 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTEL 624

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
           G   A+ +LE +P +P  Y+L+SN+ A++ +WKDV ++R  M+   L K  G SWIE+ N
Sbjct: 625 GRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVEN 684

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           ++H F   + SH ++ +IY++L ++  K+ +E GY+  T FVLH++EEE+K Q L+ HSE
Sbjct: 685 RVHRFHVGETSHPQAWQIYQELDQLASKI-KEMGYIPDTDFVLHDIEEEQKEQFLFQHSE 743

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           ++A+A+G++ +++   IRI KNLRVC DCH+  K +S   GRE+VVRD+NRFHH + GVC
Sbjct: 744 KIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVC 803

Query: 830 SCGDYW 835
           SC DYW
Sbjct: 804 SCNDYW 809



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 166/585 (28%), Positives = 309/585 (52%), Gaps = 16/585 (2%)

Query: 1   MYGKCGSVLDAEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           +Y KCG    A  +F+ + ++R + +W+AM+  + +N    + + T+  M  LG   + +
Sbjct: 70  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN-SLVAMYAK-CYDFRKARQLFD 117
            F  VI+AC+       G  I+G V+K GY   D  V   L+ M+ K   D   A ++FD
Sbjct: 130 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 189

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           +M E+ ++V W  +I+ ++  G   +A+ LF +M+  G V + +T+ + L AC +     
Sbjct: 190 KMPER-NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLA 248

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARC---GKMTEAAGVLYQLENKDSVSWNSMLT 234
           LG ++H+  ++ G  L V V  +L+ MYA+C   G + ++  V  Q+   + +SW +++T
Sbjct: 249 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 308

Query: 235 GFVQN-DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            +VQ+ +   +A++ F ++     +P+     + + A G L +   G+++++YA+K G  
Sbjct: 309 AYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA 368

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S   +GN+L+ MYA+   +    + F  +  ++ +S+  I+ GYA+N    +A  LF  +
Sbjct: 369 SVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 428

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
              G+        S+L   + +  M + ++IHG +++ G  S+  I NA++ +Y +CGNI
Sbjct: 429 ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNI 488

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + +  VF  +E ++V+SWTSMI+ +  +G A  ALE+F+ M E   + + IT V+ LSA 
Sbjct: 489 EAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC 548

Query: 473 SSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLIL 530
           S + ++ +G K  N      G        + +VD+  R G L  A +  N +    D ++
Sbjct: 549 SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV 608

Query: 531 WTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           W +++ A  +HG    G+ A ++   +E E   P     L+ L+A
Sbjct: 609 WRTLLGACRVHGNTELGRHAAEMI--LEQEPDDPAAYILLSNLHA 651



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 250/500 (50%), Gaps = 28/500 (5%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A ++FDK+ +R + TW  M+  +   G     ++ +  M + G   D FT+  V+
Sbjct: 179 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 238

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY---DFRKARQLFDRMGEK 122
            AC  L  L  G ++H  V++ G      +  SLV MYAKC        +R++F++M E 
Sbjct: 239 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE- 297

Query: 123 EDVVLWNSIISAYSASGQC-LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            +V+ W +II+AY  SG+C  EA+ LF +M    +  N ++F + L+AC + S    G +
Sbjct: 298 HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 357

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +++  VK G      V N+LI+MYAR G+M +A      L  K+ VS+N+++ G+ +N  
Sbjct: 358 VYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK 417

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A   F E+   G         + +S +  +G +  G+++H   +K G+ S+  I N 
Sbjct: 418 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 477

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ MY++C  +    +VF +M  ++ ISWT++I G+A++    +ALE+F  +   G   +
Sbjct: 478 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 537

Query: 362 VMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            +   +VL ACS       G K  +   + HG + R     +     +VD+ G+ G +  
Sbjct: 538 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR-----MEHYACMVDLLGRSGLLVE 592

Query: 415 SRNVFESIE-SKDVVSWTSMISS-YVHNG--LANEALELFYLMNEANVESDSITLVSALS 470
           +     S+    D + W +++ +  VH    L   A E+  ++ +   +  +  L+S L 
Sbjct: 593 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEM--ILEQEPDDPAAYILLSNLH 650

Query: 471 AASS-----LSILKKGKELN 485
           A++      + I K  KE N
Sbjct: 651 ASAGQWKDVVKIRKSMKERN 670


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 294/767 (38%), Positives = 460/767 (59%), Gaps = 12/767 (1%)

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           +++   K+H L+L  G      +   L+ +Y    D   +R  FD +  K+++  WNSII
Sbjct: 34  NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYI-HKKNIFSWNSII 92

Query: 133 SAYSASGQCLEALG----LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           SAY   G+  EA+     LF       L  + YTF   L+AC        G ++H    K
Sbjct: 93  SAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSL---VDGKKVHCCVFK 149

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            G    V+VA +L+ +Y+R G +  A  V   +  KD  SWN+M++GF QN     A+  
Sbjct: 150 MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGV 209

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
              ++G G K D +   + +    +  +++NG  +H + +K G  SD+ + N L++MY+K
Sbjct: 210 LNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSK 269

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
              +     VF QM  +D +SW +IIA Y QNN    AL  F+ +QL G+  D++ + S+
Sbjct: 270 FGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
               S L     ++ I G++IR+     D+VI NA+V++Y K G ++ +  VF+ +  KD
Sbjct: 330 TSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKD 389

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEA-NVESDSITLVSALSAASSLSILKKGKELN 485
            +SW ++++ Y  NGLA+EA++ + +M E  +   +  T VS + A S +  L++G +++
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIH 449

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
             +I+    L+  VA+ L+D+Y +CG L+ A  +F  +     + W ++I + G+HGRG+
Sbjct: 450 AKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGE 509

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A+ LF  M AE    DHITF++LL ACSHSGL++EG+K  +IM+ +Y + P  +HY C+
Sbjct: 510 EALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCM 569

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           VDLLGRA +LE+AY+ VR+M I+P A +W ALL AC+++ N ELG + + +LLE+D  N 
Sbjct: 570 VDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENV 629

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
           G YVL+SN++A + KW+ V +VR   R  GL+KTPG S + +G+K   F   +++H +  
Sbjct: 630 GYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYT 689

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
           EIYK+L  ++ K+ +  GYV    FV  ++EE+EK Q+L  HSERLAIA+G++ +   S 
Sbjct: 690 EIYKELKVLSAKM-KSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSP 748

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           IRI KNLRVC DCH+  K +SR+  RE+VVRD+NRFHHF+ G+CSC 
Sbjct: 749 IRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 174/586 (29%), Positives = 315/586 (53%), Gaps = 22/586 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----GISV 56
           +Y   G +  +   FD + ++ +F+WN+++ AYV  G+    +   +++  +     +  
Sbjct: 63  LYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRP 122

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D +TFP ++KAC  L D   G K+H  V K G++   F+  SLV +Y++      A ++F
Sbjct: 123 DFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVF 179

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
             M  K DV  WN++IS +  +G    ALG+   M+  G+  +  T  + L  C  S   
Sbjct: 180 VDMPVK-DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDV 238

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G+ IH   +K G +  V+V+NALI MY++ G++ +A  V  Q+E +D VSWNS++  +
Sbjct: 239 INGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY 298

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS-D 295
            QN+    A++FF+ +Q  G +PD +  V+  S   +L +    + +  + I++ ++  D
Sbjct: 299 EQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKD 358

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + IGN L++MYAK   +N    VF Q+  +D ISW T++ GY QN    +A++ +  ++ 
Sbjct: 359 VVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME- 417

Query: 356 EGLD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
           E  D   +     S++ A S +  + Q  +IH  +I+  L  D+ +   ++D+YGKCG +
Sbjct: 418 ECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRL 477

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + + ++F  I     V W ++I+S   +G   EAL+LF  M    V++D IT VS LSA 
Sbjct: 478 EDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSAC 537

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANK-VFNCVQTKDLI 529
           S   ++ +G++    I++K + ++ S+     +VD+  R G L+ A + V N     D  
Sbjct: 538 SHSGLVDEGQKCFD-IMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDAS 596

Query: 530 LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +W ++++A  ++G    G +A D   ++++E+    +   L+ +YA
Sbjct: 597 IWGALLSACKIYGNAELGTLASDRLLEVDSENVG--YYVLLSNIYA 640


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 302/828 (36%), Positives = 465/828 (56%), Gaps = 9/828 (1%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A QLFD+   + +  +N +L  +  N      L  +  +   G+ VD  T  C +K C +
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L D   G ++H   LK G+     +  SLV MY K  DF   R +FD MG K +VV W S
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIK-NVVSWTS 175

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           ++S Y+ +G   E + L  +MQ  G+  N +TF   L A  D S    G+++HA  VK+G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
                +V NALI MY +   + +A  V   +  +DSV+WN M+ G+     Y +  Q F 
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            ++ AG K  +     A+    +   L   K+LH   +K G+     I   LM  Y+KC 
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355

Query: 311 CVNYMGRVFYQM-TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
            V+   ++F     A + ++WT +I G+ QNN + KA++LF  +  EG+  +     +VL
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL 415

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
                 K  S   ++H  II+     +  +  A++D Y K GN+  S  VF SI +KD+V
Sbjct: 416 AG----KPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIV 471

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILKKGKELNGF 487
           +W++M++       + +A+E+F  + +  V+ +  T  S ++A +SS + ++ GK+++  
Sbjct: 472 AWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT 531

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
            ++ G +    V+S+L+ MY++ G ++ A KVF   + +D++ W SMI   G HG  K A
Sbjct: 532 AVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKA 591

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           +++F  M+ +    D +TF+ +L AC+H+GL+ EG+K+  IM  DY +D   EHY+C+VD
Sbjct: 592 LEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVD 651

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
           L  RA   ++A   +  M    +  +W  LL ACRVH N ELG++ A+KL+ L P +   
Sbjct: 652 LYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVG 711

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
           YVL+SN+ A +  W++   VR  M    +KK  G SWIEI N+I SF+A D SH  SD +
Sbjct: 712 YVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLV 771

Query: 728 YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIR 787
           Y KL E++ KL ++ GY   T +V H+VEEE K  +L  HSERLAIAYG++    G+ I+
Sbjct: 772 YAKLEELSIKL-KDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQ 830

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           I KNLR+C DCH+  +L+S +  R L+VRD+NRFHHF+ GVCSCG YW
Sbjct: 831 IEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 162/547 (29%), Positives = 286/547 (52%), Gaps = 12/547 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K     D   +FD++  + V +W ++L  Y  NG    V+   ++M++ G++ + FT
Sbjct: 148 MYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFT 207

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ A A    ++ G ++H +++K G++ T F+ N+L+ MY K      A  +FD M 
Sbjct: 208 FATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMV 267

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V WN +I  Y+A G  LE   +F  M+  G+  +   F  AL+ C          
Sbjct: 268 VR-DSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTK 326

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQN 239
           ++H   VK+G      +  AL+  Y++C  + EA  +    +   + V+W +M+ GFVQN
Sbjct: 327 QLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQN 386

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +   KA+  F ++   G +P+   T + V A G+  +LL+  +LHA  IK  +     + 
Sbjct: 387 NNNEKAVDLFCQMSREGVRPNHF-TYSTVLA-GKPSSLLS--QLHAQIIKAYYEKVPSVA 442

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+D Y K   V    RVFY + A+D ++W+ ++ G AQ     KA+E+F  +  EG+ 
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVK 502

Query: 360 ADVMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRN 417
            +     SV+ AC S    +   K+IH   ++ G S+ L + +A++ +Y K GNI+ +  
Sbjct: 503 PNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEK 562

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF   E +D+VSW SMI+ Y  +G A +ALE+F +M    +  D +T +  L+A +   +
Sbjct: 563 VFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGL 622

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSM 534
           +++G++    +I K ++++  +   S +VD+Y+R G  D A  + N +       +W ++
Sbjct: 623 VEEGEKYFNIMI-KDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681

Query: 535 INANGLH 541
           + A  +H
Sbjct: 682 LAACRVH 688



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 229/449 (51%), Gaps = 13/449 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   V DAE +FD +  R   TWN M+G Y + G  L   + + RMR+ G+ +    
Sbjct: 249 MYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTV 308

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +K C+  ++L+   ++H  V+K GY+    I  +L+  Y+KC    +A +LF    
Sbjct: 309 FCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMAD 368

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              +VV W ++I  +  +    +A+ LF +M R G+  N +T+   L     S    L  
Sbjct: 369 AAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS----LLS 424

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +K+       VA AL+  Y + G + E+A V Y +  KD V+W++MLTG  Q  
Sbjct: 425 QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTR 484

Query: 241 LYCKAMQFFRELQGAGQKPDQVC---TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
              KAM+ F +L   G KP++      +NA S+S     + +GK++HA A+K G  + L 
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSA--ATVEHGKQIHATAVKSGKSNALC 542

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + + L+ MY+K   +    +VF +   +D +SW ++I GY Q+    KALE+F+ +Q +G
Sbjct: 543 VSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQG 602

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYS 415
           L  D +    VL AC+    + + ++    +I+    D  I   + +VD+Y + G  D +
Sbjct: 603 LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKA 662

Query: 416 RNVFESIE-SKDVVSWTSMISS-YVHNGL 442
            ++   +        W +++++  VH  L
Sbjct: 663 MDIINGMPFPASPTIWRTLLAACRVHRNL 691



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 154/347 (44%), Gaps = 24/347 (6%)

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           Y  ++F +   +D   +  ++  +++NN   +AL LF+ +   GL  D + +   L  C 
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115

Query: 374 GLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L      +++H   ++ G L D+ +  ++VD+Y K  + +  R +F+ +  K+VVSWTS
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           ++S Y  NGL +E + L   M    V  +  T  + L A +  SI++ G +++  I++ G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           F     V ++L+ MY +   +  A  VF+ +  +D + W  MI      G       +F+
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 553 KMEAESFAPDHITFLALLYACS-----------HSGLINEGKKFLEIMRCDYQLDPWPEH 601
           +M           F   L  CS           H G++  G +F + +R           
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIR----------- 344

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
              L+    + + ++EA++             W A++G    ++N E
Sbjct: 345 -TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNE 390


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 295/746 (39%), Positives = 453/746 (60%), Gaps = 14/746 (1%)

Query: 95  IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFRE-MQR 153
           I   LV +Y    +   AR  FD +  + DV  WN +IS Y  +G   E +  F   M  
Sbjct: 88  ISAKLVNLYCYLGNVALARYTFDHIHNR-DVYAWNLMISGYGRAGYSSEVIRCFSLFMLS 146

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            GL  +  TF + L+AC +    T G +IH   +K G    VYVA +LI +Y R G +  
Sbjct: 147 SGLQPDYRTFPSVLKACRNV---TDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVN 203

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +  ++  +D  SWN+M++G+ Q+    +A+     L+      D V  V+ +SA   
Sbjct: 204 ARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSLLSACTE 259

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
            G+   G  +H+Y+IK G  S+L + N L+D+YA+   +    +VF +M  +D ISW +I
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSI 319

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG- 392
           I  Y  N   L+A+ LF+ ++L  +  D + + S+    S L  +   + + G+ +RKG 
Sbjct: 320 IKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGW 379

Query: 393 -LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
            L D+ I NA+V +Y K G +D +R VF  + +KDV+SW ++IS Y  NG A+EA+E++ 
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYN 439

Query: 452 LMNE--ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           +M E    + ++  T VS L A S    L++G +L+G +++ G  L+  V +SL DMY +
Sbjct: 440 IMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGK 499

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CG LD A  +F  +   + + W ++I  +G HG G+ A+ LF +M  E   PDHITF+ L
Sbjct: 500 CGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTL 559

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           L ACSHSGL++EG+   E+M+ DY + P  +HY C+VDL GRA  LE A  F++SM ++P
Sbjct: 560 LSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQP 619

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
            A +W ALL ACRVH N +LG+I ++ L E++P + G +VL+SN++A++ KW+ V+++R 
Sbjct: 620 DASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRS 679

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
              G GL+KTPG S +E+ NK+  F   +++H   +E+Y++L  + EKL+   GYV   +
Sbjct: 680 ITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMV-GYVPDHR 738

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
           FVL +VE++EK  +L  HSERLA+A+ ++ +   + IRI KNLRVC DCHS  K +S++ 
Sbjct: 739 FVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKIT 798

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
            RE++VRD+NRFHHF+ GVCSCGDYW
Sbjct: 799 EREIIVRDSNRFHHFKNGVCSCGDYW 824



 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 180/581 (30%), Positives = 315/581 (54%), Gaps = 25/581 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAF 59
           +Y   G+V  A   FD +  R V+ WN M+  Y   G    V+  +S  M   G+  D  
Sbjct: 95  LYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYR 154

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP V+KAC  + D   G KIH L LK G+    ++  SL+ +Y +      AR LFD M
Sbjct: 155 TFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEM 211

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + D+  WN++IS Y  SG   EAL L   ++ +    ++ T V+ L AC ++     G
Sbjct: 212 PTR-DMGSWNAMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSLLSACTEAGDFNRG 266

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           + IH+ ++K G   +++V+N LI +YA  G + +   V  ++  +D +SWNS++  +  N
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELN 326

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG-FVSDLQI 298
           +   +A+  F+E++ +  +PD +  ++  S   +LG +   + +  + +++G F+ D+ I
Sbjct: 327 EQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITI 386

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG- 357
           GN ++ MYAK   V+    VF  +  +D ISW TII+GYAQN    +A+E++  ++ EG 
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGG 446

Query: 358 -LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
            + A+     SVL ACS    + Q  ++HG +++ GL  D+ +  ++ D+YGKCG +D +
Sbjct: 447 EISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDA 506

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
            ++F  I   + V W ++I+ +  +G   +A+ LF  M +  V+ D IT V+ LSA S  
Sbjct: 507 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 566

Query: 476 SILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQTKDLILWT 532
            ++ +G E    +++  + +  S+     +VD+Y R G L+IA N + +     D  +W 
Sbjct: 567 GLVDEG-EWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWG 625

Query: 533 SMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALL 570
           ++++A  +HG    GK+A +  +++E     P+H+ +  LL
Sbjct: 626 ALLSACRVHGNVDLGKIASEHLFEVE-----PEHVGYHVLL 661


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 301/837 (35%), Positives = 476/837 (56%), Gaps = 29/837 (3%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y KCG + DA  LFD + +R V  WN ML  YV  G      + +S     G+  D F+
Sbjct: 771  IYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFS 830

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               ++                  V +  +D   ++ + + A  AK         L D   
Sbjct: 831  VQLILNG----------------VSEVNWDEGKWLADQVQAYAAKL-------SLSD--- 864

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  DV  WN  +S    +G    A+  F  M  + +  +A T +  L A   +    LG 
Sbjct: 865  DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGK 924

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            ++H   VKSG +  V VAN+L+ MY++ G    A  V   +++ D +SWNSM++   Q+ 
Sbjct: 925  QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 984

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIG 299
            L  +++  F +L   G KPD     + + A   L + LN  +++H +A+K G ++D  + 
Sbjct: 985  LEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVA 1044

Query: 300  NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             TL+D+Y+K   +     +F      D   W  ++ GY   N   KALELF  +   G  
Sbjct: 1045 TTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEK 1104

Query: 360  ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            +D + + +   AC  L  + Q K+IH + I+ G  SDL + + I+D+Y KCG++  +  V
Sbjct: 1105 SDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIV 1164

Query: 419  FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
            F  I + D V+WTSMIS  V NG  ++AL +++ M ++ V  D  T  + + A+S ++ L
Sbjct: 1165 FNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTAL 1224

Query: 479  KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            ++G++L+  +I+     +  V +SLVDMYA+CG ++ A ++F  +  +++ LW +M+   
Sbjct: 1225 EQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGL 1284

Query: 539  GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
              HG  + A++LF  M++    PD ++F+ +L ACSH+GL +E  ++L  M  DY ++P 
Sbjct: 1285 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPE 1344

Query: 599  PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
             EHY+CLVD LGRA  ++EA + + +M  + +A +  ALLGACR+  + E G+ VA +L 
Sbjct: 1345 IEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLF 1404

Query: 659  ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
             L+P +   YVL+SN++AA+ +W DV   R  M+   +KK PG SWI++ N +H F+  D
Sbjct: 1405 ALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDD 1464

Query: 719  KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            +SH ++D IY K+ E+ + + RE GYV  T+FVL +VE+EEK + LY HSE+LAIAYG++
Sbjct: 1465 RSHPQADIIYDKVEEMMKTI-REDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLI 1523

Query: 779  KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             +   + IR+ KNLRVC DCH+  K +S++F RE+V+RDANRFHHF  GVCSCGDYW
Sbjct: 1524 STPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 196/656 (29%), Positives = 330/656 (50%), Gaps = 37/656 (5%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVS-----NGEPLRVLETYSRMRVLGIS 55
            MY KCGS+  A Q+FD   +R + TWNA+LGAY +     +G     L  +  +R    S
Sbjct: 665  MYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGS 724

Query: 56   VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
                T   V+K C     L     +HG  +K G +   F+  +LV +Y+KC   R AR L
Sbjct: 725  TTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLL 784

Query: 116  FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            FD M E+ DVVLWN ++  Y   G   EA  LF E  R GL  + ++    L    + ++
Sbjct: 785  FDWMRER-DVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNW 843

Query: 176  ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
            +             G+    ++A+ + A          AA +    +N D   WN  L+ 
Sbjct: 844  D------------EGK----WLADQVQAY---------AAKLSLSDDNPDVFCWNKKLSE 878

Query: 236  FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
             +       A++ F  + G     D V  +  ++A     +L  GK++H  A+K G  SD
Sbjct: 879  CLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSD 938

Query: 296  LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            + + N+L++MY+K  C  +   VF  M   D ISW ++I+  AQ++   +++ LF  +  
Sbjct: 939  VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH 998

Query: 356  EGLDADVMIIGSVLMACSGL-KCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNID 413
            EGL  D   + SVL ACS L   ++ +++IH + ++ G ++D  +   ++DVY K G ++
Sbjct: 999  EGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKME 1058

Query: 414  YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
             +  +F++ +  D+  W +M+  Y+      +ALELF L++++  +SD ITL +A  A  
Sbjct: 1059 EAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACG 1118

Query: 474  SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
             L +L +GK+++   I+ GF+ +  V S ++DMY +CG +  A  VFN +   D + WTS
Sbjct: 1119 CLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTS 1178

Query: 534  MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCD 592
            MI+    +G    A+ ++++M      PD  TF  L+ A S    + +G++    +++ D
Sbjct: 1179 MISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLD 1238

Query: 593  YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
               DP+      LVD+  +  ++E+AY+  + M +   A +W A+L     H N E
Sbjct: 1239 CVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVRNIA-LWNAMLVGLAQHGNAE 1291



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 247/532 (46%), Gaps = 39/532 (7%)

Query: 64   VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
            +++      +L  G   H  ++  G     F+ N+L+ MY+KC     ARQ+FD   E+ 
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPER- 685

Query: 124  DVVLWNSIISAYSAS-----GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
            D+V WN+I+ AY+AS     G   E L LFR ++     T   T    L+ C +S     
Sbjct: 686  DLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWA 745

Query: 179  GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
               +H   +K G    V+V+ AL+ +Y++CG+M +A  +   +  +D V WN ML G+VQ
Sbjct: 746  AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 805

Query: 239  NDLYCKAMQFFRELQGAGQKPDQVCT---VNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
              L  +A Q F E   +G +PD+      +N VS            ++ AYA K     D
Sbjct: 806  LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDD 865

Query: 296  LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
                                          D   W   ++       +  A+E F  +  
Sbjct: 866  ----------------------------NPDVFCWNKKLSECLWAGDNWGAIECFVNMNG 897

Query: 356  EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
              +D D + +  VL A +G   +   K++HG  ++ GL SD+ + N++V++Y K G   +
Sbjct: 898  LNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYF 957

Query: 415  SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
            +R VF  ++  D++SW SMISS   + L  E++ LF  +    ++ D  TL S L A SS
Sbjct: 958  AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSS 1017

Query: 475  L-SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            L   L   ++++   ++ G   +  VA++L+D+Y++ G ++ A  +F      DL  W +
Sbjct: 1018 LIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNA 1077

Query: 534  MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
            M+    +   GK A++LF  +       D IT      AC    L+++GK+ 
Sbjct: 1078 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQI 1129


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 300/799 (37%), Positives = 449/799 (56%), Gaps = 65/799 (8%)

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
           +VA Y  C     A  + +R+      V WN +I  +   G+   A+ +   M R G   
Sbjct: 95  VVASYLACGATDYALLVLERV-TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRP 153

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           + +T    L+AC +      G   H     +G    V++ NAL+AMY+RCG + EA+ + 
Sbjct: 154 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 213

Query: 219 YQLENK---DSVSWNSMLTGFVQNDLYCKAMQFFREL------QGAGQKPDQVCTVNAVS 269
            ++  +   D +SWNS+++  V++     A+  F ++      +   ++ D +  VN + 
Sbjct: 214 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 273

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A G L  +   KE+H  AI+ G   D+ +GN L+D YAKC  +    +VF  M  +D +S
Sbjct: 274 ACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 333

Query: 330 W-----------------------------------TTIIAGYAQNNCHLKALELFRTVQ 354
           W                                   T +IAGY+Q  C  +AL LFR + 
Sbjct: 334 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 393

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-----------SDLVILNAIV 403
             G   + + I SVL AC+ L   SQ  EIH Y ++  L            DL++ NA++
Sbjct: 394 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 453

Query: 404 DVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNGLANEALELFYLM--NEANVE 459
           D+Y KC +   +R++F+ I  E ++VV+WT MI  +   G +N+AL+LF  M      V 
Sbjct: 454 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 513

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS---VASSLVDMYARCGALDIA 516
            ++ T+   L A + L+ ++ GK+++ +++R     E S   VA+ L+DMY++CG +D A
Sbjct: 514 PNAYTISCILMACAHLAAIRIGKQIHAYVLRH-HRYESSAYFVANCLIDMYSKCGDVDTA 572

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             VF+ +  K  I WTSM+   G+HGRG  A+D+F KM    F PD ITFL +LYACSH 
Sbjct: 573 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 632

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           G++++G  + + M  DY L P  EHYAC +DLL R+  L++A++ V+ M +EPTA VW A
Sbjct: 633 GMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVA 692

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL ACRVHSN EL E    KL+E++  N G+Y LISN++A + +WKDV ++R  M+ SG+
Sbjct: 693 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 752

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           KK PG SW++      SF   D+SH  S +IY  L  + +++ +  GYV +T F LH+V+
Sbjct: 753 KKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRI-KAMGYVPETNFALHDVD 811

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EEEK  +L  HSE+LA+AYG+L ++ G  IRITKNLRVC DCHS    +S++   E+VVR
Sbjct: 812 EEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVR 871

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D +RFHHF+ G CSCG YW
Sbjct: 872 DPSRFHHFKNGSCSCGGYW 890



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 182/622 (29%), Positives = 301/622 (48%), Gaps = 65/622 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG+   A  + ++V+      WN ++  ++  G     +    RM   G   D FT 
Sbjct: 99  YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTL 158

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+KAC  L    CG+  HGL+   G++S  FI N+LVAMY++C    +A  +FD + +
Sbjct: 159 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 218

Query: 122 K--EDVVLWNSIISAYSASGQCLEALGLFREM------QRVGLVTNAYTFVAALQACEDS 173
           +  +DV+ WNSI+SA+  S     AL LF +M      +     ++  + V  L AC   
Sbjct: 219 RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL 278

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                  E+H   +++G    V+V NALI  YA+CG M  A  V   +E KD VSWN+M+
Sbjct: 279 KAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 338

Query: 234 TGFVQNDLY---------------------------------C--KAMQFFRELQGAGQK 258
            G+ Q+  +                                 C  +A+  FR++  +G  
Sbjct: 339 AGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL 398

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS----------DLQIGNTLMDMYAK 308
           P+ V  ++ +SA   LG    G E+HAY++K   ++          DL + N L+DMY+K
Sbjct: 399 PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 458

Query: 309 CCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE--GLDADVMI 364
           C        +F    +  ++ ++WT +I G+AQ      AL+LF  +  E  G+  +   
Sbjct: 459 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 518

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYSRNVFES 421
           I  +LMAC+ L  +   K+IH Y++R      S   + N ++D+Y KCG++D +R+VF+S
Sbjct: 519 ISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDS 578

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  K  +SWTSM++ Y  +G  +EAL++F  M +A    D IT +  L A S   ++ +G
Sbjct: 579 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 638

Query: 482 -KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMINANG 539
               +      G        +  +D+ AR G LD A   V +       ++W ++++A  
Sbjct: 639 LSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACR 698

Query: 540 LHGRGKV---AIDLFYKMEAES 558
           +H   ++   A++   +M AE+
Sbjct: 699 VHSNVELAEHALNKLVEMNAEN 720



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 239/508 (47%), Gaps = 61/508 (12%)

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           +   ++A Y  CG    A  VL ++    +V WN ++   ++      A+     +  AG
Sbjct: 91  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            +PD     + + A G L +   G   H      GF S++ I N L+ MY++C  +    
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210

Query: 317 RVFYQMTAQ---DFISWTTIIAGYAQNNCHLKALELFRTVQL------EGLDADVMIIGS 367
            +F ++T +   D ISW +I++ + +++    AL+LF  + L          +D++ I +
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L AC  LK + QTKE+HG  IR G   D+ + NA++D Y KCG ++ +  VF  +E KD
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESD------------------------- 461
           VVSW +M++ Y  +G    A ELF  M + N+  D                         
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390

Query: 462 ----------SITLVSALSAASSLSILKKGKELNGFIIRK----------GFNLEGSVAS 501
                      +T++S LSA +SL    +G E++ + ++           G + +  V +
Sbjct: 391 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 450

Query: 502 SLVDMYARCGALDIANKVFNCV--QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
           +L+DMY++C +   A  +F+ +  + ++++ WT MI  +  +G    A+ LF +M +E +
Sbjct: 451 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 510

Query: 560 --APDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA-CLVDLLGRANHLE 616
             AP+  T   +L AC+H   I  GK+    +   ++ +      A CL+D+  +   ++
Sbjct: 511 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 570

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVH 644
            A     SM  + +A  W +++    +H
Sbjct: 571 TARHVFDSMS-QKSAISWTSMMTGYGMH 597



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 249/549 (45%), Gaps = 89/549 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR---TVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----- 52
           MY +CGS+ +A  +FD+++QR    V +WN+++ A+V +      L+ +S+M ++     
Sbjct: 199 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 258

Query: 53  -GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY---- 107
                D  +   ++ AC  LK +    ++HG  ++ G     F+ N+L+  YAKC     
Sbjct: 259 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMEN 318

Query: 108 ---------------------------DFRKARQLFDRMGEKE---DVVLWNSIISAYSA 137
                                      +F  A +LF  M ++    DVV W ++I+ YS 
Sbjct: 319 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQ 378

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS-------- 189
            G   EAL LFR+M   G + N  T ++ L AC      + G EIHA ++K+        
Sbjct: 379 RGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDND 438

Query: 190 --GQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQNDLYCKA 245
             G++  + V NALI MY++C     A  +     LE ++ V+W  M+ G  Q      A
Sbjct: 439 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 498

Query: 246 MQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV--SDLQIGNT 301
           ++ F E+  +  G  P+       + A   L  +  GK++HAY ++      S   + N 
Sbjct: 499 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANC 558

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMY+KC  V+    VF  M+ +  ISWT+++ GY  +    +AL++F  ++  G   D
Sbjct: 559 LIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 618

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------------IVDVYGK 408
            +    VL ACS           H  ++ +GLS    ++A              +D+  +
Sbjct: 619 DITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLAR 667

Query: 409 CGNIDYS-RNVFESIESKDVVSWTSMISS-YVHNG--LANEALELFYLMNEANVESDSIT 464
            G +D + R V +       V W +++S+  VH+   LA  AL     MN  N    S T
Sbjct: 668 SGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN--DGSYT 725

Query: 465 LVSALSAAS 473
           L+S + A +
Sbjct: 726 LISNIYATA 734



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 152/310 (49%), Gaps = 10/310 (3%)

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
           + F+S   +G  ++  Y  C   +Y   V  ++T    + W  +I  + +      A+ +
Sbjct: 83  EPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINV 142

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
              +   G   D   +  VL AC  L         HG I   G  S++ I NA+V +Y +
Sbjct: 143 SCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSR 202

Query: 409 CGNIDYSRNVFESIESK---DVVSWTSMISSYVHNGLANEALELFYLMN------EANVE 459
           CG+++ +  +F+ I  +   DV+SW S++S++V +  A  AL+LF  M         N  
Sbjct: 203 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 262

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
           SD I++V+ L A  SL  + + KE++G  IR G   +  V ++L+D YA+CG ++ A KV
Sbjct: 263 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKV 322

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           FN ++ KD++ W +M+      G  + A +LF  M  E+   D +T+ A++   S  G  
Sbjct: 323 FNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCS 382

Query: 580 NEGKKFLEIM 589
           +E       M
Sbjct: 383 HEALNLFRQM 392



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
           S+ + +V  Y  CGA D A  V   V     + W  +I  +   GR   AI++  +M   
Sbjct: 90  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 149

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD-YQLDPWPEHYAC--LVDLLGRANH 614
              PDH T   +L AC        G  F  ++ C+ ++ +     + C  LV +  R   
Sbjct: 150 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNV----FICNALVAMYSRCGS 205

Query: 615 LEEAYQFVRSMQIEPTAEV--WCALLGACRVHSNKELGEIVAKKLLELDPGNPGN----Y 668
           LEEA      +      +V  W +++ A    SN      +  K+  +    P N     
Sbjct: 206 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 265

Query: 669 VLISNVFAASRKWKDVEQVR 688
           + I N+  A    K V Q +
Sbjct: 266 ISIVNILPACGSLKAVPQTK 285


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 300/799 (37%), Positives = 449/799 (56%), Gaps = 65/799 (8%)

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
           +VA Y  C     A  + +R+      V WN +I  +   G+   A+ +   M R G   
Sbjct: 102 VVASYLACGATDYALLVLERV-TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRP 160

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           + +T    L+AC +      G   H     +G    V++ NAL+AMY+RCG + EA+ + 
Sbjct: 161 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 220

Query: 219 YQLENK---DSVSWNSMLTGFVQNDLYCKAMQFFREL------QGAGQKPDQVCTVNAVS 269
            ++  +   D +SWNS+++  V++     A+  F ++      +   ++ D +  VN + 
Sbjct: 221 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 280

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A G L  +   KE+H  AI+ G   D+ +GN L+D YAKC  +    +VF  M  +D +S
Sbjct: 281 ACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 340

Query: 330 W-----------------------------------TTIIAGYAQNNCHLKALELFRTVQ 354
           W                                   T +IAGY+Q  C  +AL LFR + 
Sbjct: 341 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 400

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-----------SDLVILNAIV 403
             G   + + I SVL AC+ L   SQ  EIH Y ++  L            DL++ NA++
Sbjct: 401 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 460

Query: 404 DVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNGLANEALELFYLM--NEANVE 459
           D+Y KC +   +R++F+ I  E ++VV+WT MI  +   G +N+AL+LF  M      V 
Sbjct: 461 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 520

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS---VASSLVDMYARCGALDIA 516
            ++ T+   L A + L+ ++ GK+++ +++R     E S   VA+ L+DMY++CG +D A
Sbjct: 521 PNAYTISCILMACAHLAAIRIGKQIHAYVLRH-HRYESSAYFVANCLIDMYSKCGDVDTA 579

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             VF+ +  K  I WTSM+   G+HGRG  A+D+F KM    F PD ITFL +LYACSH 
Sbjct: 580 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 639

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           G++++G  + + M  DY L P  EHYAC +DLL R+  L++A++ V+ M +EPTA VW A
Sbjct: 640 GMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVA 699

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL ACRVHSN EL E    KL+E++  N G+Y LISN++A + +WKDV ++R  M+ SG+
Sbjct: 700 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 759

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           KK PG SW++      SF   D+SH  S +IY  L  + +++ +  GYV +T F LH+V+
Sbjct: 760 KKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRI-KAMGYVPETNFALHDVD 818

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EEEK  +L  HSE+LA+AYG+L ++ G  IRITKNLRVC DCHS    +S++   E+VVR
Sbjct: 819 EEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVR 878

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D +RFHHF+ G CSCG YW
Sbjct: 879 DPSRFHHFKNGSCSCGGYW 897



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 182/622 (29%), Positives = 301/622 (48%), Gaps = 65/622 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG+   A  + ++V+      WN ++  ++  G     +    RM   G   D FT 
Sbjct: 106 YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTL 165

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+KAC  L    CG+  HGL+   G++S  FI N+LVAMY++C    +A  +FD + +
Sbjct: 166 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 225

Query: 122 K--EDVVLWNSIISAYSASGQCLEALGLFREM------QRVGLVTNAYTFVAALQACEDS 173
           +  +DV+ WNSI+SA+  S     AL LF +M      +     ++  + V  L AC   
Sbjct: 226 RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL 285

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                  E+H   +++G    V+V NALI  YA+CG M  A  V   +E KD VSWN+M+
Sbjct: 286 KAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 345

Query: 234 TGFVQNDLY---------------------------------C--KAMQFFRELQGAGQK 258
            G+ Q+  +                                 C  +A+  FR++  +G  
Sbjct: 346 AGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL 405

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS----------DLQIGNTLMDMYAK 308
           P+ V  ++ +SA   LG    G E+HAY++K   ++          DL + N L+DMY+K
Sbjct: 406 PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 465

Query: 309 CCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE--GLDADVMI 364
           C        +F    +  ++ ++WT +I G+AQ      AL+LF  +  E  G+  +   
Sbjct: 466 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 525

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYSRNVFES 421
           I  +LMAC+ L  +   K+IH Y++R      S   + N ++D+Y KCG++D +R+VF+S
Sbjct: 526 ISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDS 585

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  K  +SWTSM++ Y  +G  +EAL++F  M +A    D IT +  L A S   ++ +G
Sbjct: 586 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 645

Query: 482 -KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMINANG 539
               +      G        +  +D+ AR G LD A   V +       ++W ++++A  
Sbjct: 646 LSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACR 705

Query: 540 LHGRGKV---AIDLFYKMEAES 558
           +H   ++   A++   +M AE+
Sbjct: 706 VHSNVELAEHALNKLVEMNAEN 727



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 239/508 (47%), Gaps = 61/508 (12%)

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           +   ++A Y  CG    A  VL ++    +V WN ++   ++      A+     +  AG
Sbjct: 98  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            +PD     + + A G L +   G   H      GF S++ I N L+ MY++C  +    
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217

Query: 317 RVFYQMTAQ---DFISWTTIIAGYAQNNCHLKALELFRTVQL------EGLDADVMIIGS 367
            +F ++T +   D ISW +I++ + +++    AL+LF  + L          +D++ I +
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L AC  LK + QTKE+HG  IR G   D+ + NA++D Y KCG ++ +  VF  +E KD
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESD------------------------- 461
           VVSW +M++ Y  +G    A ELF  M + N+  D                         
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397

Query: 462 ----------SITLVSALSAASSLSILKKGKELNGFIIRK----------GFNLEGSVAS 501
                      +T++S LSA +SL    +G E++ + ++           G + +  V +
Sbjct: 398 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 457

Query: 502 SLVDMYARCGALDIANKVFNCV--QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
           +L+DMY++C +   A  +F+ +  + ++++ WT MI  +  +G    A+ LF +M +E +
Sbjct: 458 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 517

Query: 560 --APDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA-CLVDLLGRANHLE 616
             AP+  T   +L AC+H   I  GK+    +   ++ +      A CL+D+  +   ++
Sbjct: 518 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 577

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVH 644
            A     SM  + +A  W +++    +H
Sbjct: 578 TARHVFDSMS-QKSAISWTSMMTGYGMH 604



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 249/549 (45%), Gaps = 89/549 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR---TVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----- 52
           MY +CGS+ +A  +FD+++QR    V +WN+++ A+V +      L+ +S+M ++     
Sbjct: 206 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 265

Query: 53  -GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY---- 107
                D  +   ++ AC  LK +    ++HG  ++ G     F+ N+L+  YAKC     
Sbjct: 266 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMEN 325

Query: 108 ---------------------------DFRKARQLFDRMGEKE---DVVLWNSIISAYSA 137
                                      +F  A +LF  M ++    DVV W ++I+ YS 
Sbjct: 326 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQ 385

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS-------- 189
            G   EAL LFR+M   G + N  T ++ L AC      + G EIHA ++K+        
Sbjct: 386 RGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDND 445

Query: 190 --GQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQNDLYCKA 245
             G++  + V NALI MY++C     A  +     LE ++ V+W  M+ G  Q      A
Sbjct: 446 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 505

Query: 246 MQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV--SDLQIGNT 301
           ++ F E+  +  G  P+       + A   L  +  GK++HAY ++      S   + N 
Sbjct: 506 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANC 565

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMY+KC  V+    VF  M+ +  ISWT+++ GY  +    +AL++F  ++  G   D
Sbjct: 566 LIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 625

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------------IVDVYGK 408
            +    VL ACS           H  ++ +GLS    ++A              +D+  +
Sbjct: 626 DITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLAR 674

Query: 409 CGNIDYS-RNVFESIESKDVVSWTSMISS-YVHNG--LANEALELFYLMNEANVESDSIT 464
            G +D + R V +       V W +++S+  VH+   LA  AL     MN  N    S T
Sbjct: 675 SGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN--DGSYT 732

Query: 465 LVSALSAAS 473
           L+S + A +
Sbjct: 733 LISNIYATA 741



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 152/310 (49%), Gaps = 10/310 (3%)

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
           + F+S   +G  ++  Y  C   +Y   V  ++T    + W  +I  + +      A+ +
Sbjct: 90  EPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINV 149

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
              +   G   D   +  VL AC  L         HG I   G  S++ I NA+V +Y +
Sbjct: 150 SCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSR 209

Query: 409 CGNIDYSRNVFESIESK---DVVSWTSMISSYVHNGLANEALELFYLMN------EANVE 459
           CG+++ +  +F+ I  +   DV+SW S++S++V +  A  AL+LF  M         N  
Sbjct: 210 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 269

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
           SD I++V+ L A  SL  + + KE++G  IR G   +  V ++L+D YA+CG ++ A KV
Sbjct: 270 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKV 329

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           FN ++ KD++ W +M+      G  + A +LF  M  E+   D +T+ A++   S  G  
Sbjct: 330 FNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCS 389

Query: 580 NEGKKFLEIM 589
           +E       M
Sbjct: 390 HEALNLFRQM 399



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
           S+ + +V  Y  CGA D A  V   V     + W  +I  +   GR   AI++  +M   
Sbjct: 97  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 156

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD-YQLDPWPEHYAC--LVDLLGRANH 614
              PDH T   +L AC        G  F  ++ C+ ++ +     + C  LV +  R   
Sbjct: 157 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNV----FICNALVAMYSRCGS 212

Query: 615 LEEAYQFVRSMQIEPTAEV--WCALLGACRVHSNKELGEIVAKKLLELDPGNPGN----Y 668
           LEEA      +      +V  W +++ A    SN      +  K+  +    P N     
Sbjct: 213 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 272

Query: 669 VLISNVFAASRKWKDVEQVR 688
           + I N+  A    K V Q +
Sbjct: 273 ISIVNILPACGSLKAVPQTK 292


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 292/741 (39%), Positives = 444/741 (59%), Gaps = 18/741 (2%)

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA--LGLFREMQRVGLVTNAYTFVAALQ 168
           +A  LFD++    DV  +N +I AYS+S     A  L L+R M R  +  N YTF  AL+
Sbjct: 75  RAHHLFDQI-PSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALK 133

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           AC   +    G  IH   + +G    ++V+ AL+ MY +C  + +AA +   +  +D V+
Sbjct: 134 ACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVA 193

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQK--PDQVCTVNAVSASGRLGNLLNGKELHAY 286
           WN+ML G+  + +Y  A+     +Q    +  P+    V  +    + G L  G  +HAY
Sbjct: 194 WNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAY 253

Query: 287 AI----------KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
            I          K      + +G  L+DMYAKC  + Y  RVF  M A++ ++W+ +I G
Sbjct: 254 RIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGG 313

Query: 337 YAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-S 394
           +   +   +A  LF+ +  +GL       I S L AC+ L  +   +++H  + + G+ +
Sbjct: 314 FVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHA 373

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           DL   N+++ +Y K G ID +  +F+ +  KD VS+++++S YV NG A EA  +F  M 
Sbjct: 374 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 433

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
             NVE D+ T+VS + A S L+ L+ G+  +G +I +G   E S+ ++L+DMYA+CG +D
Sbjct: 434 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID 493

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           ++ +VFN + ++D++ W +MI   G+HG GK A  LF +M    F PD +TF+ LL ACS
Sbjct: 494 LSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 553

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           HSGL+ EGK +  +MR  Y L P  EHY C+VDLL R   L+EAY+F++SM +     VW
Sbjct: 554 HSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVW 613

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALLGACRV+ N +LG+ V++ + EL P   GN+VL+SN+++A+ ++ +  +VR+  +  
Sbjct: 614 VALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQ 673

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           G KK+PG SWIEI   +H+F+  D+SH +S EIY++L  I   +++  GY   T FVL +
Sbjct: 674 GFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKL-GYQPDTSFVLQD 732

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           +EEEEK + L  HSE+LAIAYG+L  +E   I +TKNLRVC DCH+  K +S L  R ++
Sbjct: 733 LEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAII 792

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           VRDANRFHHF+ G CSCGD+W
Sbjct: 793 VRDANRFHHFKNGQCSCGDFW 813



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 172/553 (31%), Positives = 282/553 (50%), Gaps = 25/553 (4%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRV--LETYSRMRVLGISVDAFTFPC 63
           G +  A  LFD++    V T+N ++ AY S+        L  Y RM    ++ + +TFP 
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
            +KAC+ L D  CG  IH   +  G  +  F+  +L+ MY KC     A  +F  M  + 
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR- 189

Query: 124 DVVLWNSIISAYSASGQCLEALG--LFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           D+V WN++++ Y+  G    A+   L  +MQ   L  NA T VA L           G  
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 182 IHA----ATVKSGQNLQ------VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           +HA    A + S +N +      V +  AL+ MYA+CG +  A  V   +  ++ V+W++
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 309

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAG---QKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           ++ GFV      +A   F+ +   G     P  + +  A+ A   L +L  G++LHA   
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS--ALRACASLDHLRMGEQLHALLA 367

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K G  +DL  GN+L+ MYAK   ++    +F +M  +D +S++ +++GY QN    +A  
Sbjct: 368 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 427

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYG 407
           +F+ +Q   ++ D   + S++ ACS L  +   +  HG +I +GL S+  I NA++D+Y 
Sbjct: 428 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYA 487

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KCG ID SR VF  + S+D+VSW +MI+ Y  +GL  EA  LF  MN      D +T + 
Sbjct: 488 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 547

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS--SLVDMYARCGALDIANKVFNCVQT 525
            LSA S   ++ +GK     ++R G+ L   +     +VD+ +R G LD A +    +  
Sbjct: 548 LLSACSHSGLVIEGKHWF-HVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPL 606

Query: 526 K-DLILWTSMINA 537
           + D+ +W +++ A
Sbjct: 607 RADVRVWVALLGA 619



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 224/455 (49%), Gaps = 23/455 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY--SRMRVLGISVDA 58
           MY KC  + DA  +F  +  R +  WNAML  Y  +G     +      +M++  +  +A
Sbjct: 169 MYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNA 228

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDS--------TDFIV--NSLVAMYAKCYD 108
            T   ++   A    L  G  +H   ++    S        TD ++   +L+ MYAKC  
Sbjct: 229 STLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGS 288

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVA-AL 167
              AR++FD M  + +V  W+++I  +    +  +A  LF+ M   GL   + T +A AL
Sbjct: 289 LLYARRVFDAMPARNEVT-WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASAL 347

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           +AC       +G ++HA   KSG +  +   N+L++MYA+ G + +A  +  ++  KD+V
Sbjct: 348 RACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 407

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           S++++++G+VQN    +A   F+++Q    +PD    V+ + A   L  L +G+  H   
Sbjct: 408 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 467

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           I +G  S+  I N L+DMYAKC  ++   +VF  M ++D +SW T+IAGY  +    +A 
Sbjct: 468 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 527

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAI 402
            LF  +   G   D +    +L ACS    + + K       HGY +   +   + +   
Sbjct: 528 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICM--- 584

Query: 403 VDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           VD+  + G +D +    +S+  + DV  W +++ +
Sbjct: 585 VDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 198/423 (46%), Gaps = 43/423 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS-VDAF 59
           MY KCGS+L A ++FD +  R   TW+A++G +V      +    +  M   G+  +   
Sbjct: 282 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 341

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +    ++ACA L  L  G ++H L+ K G  +     NSL++MYAK     +A  LFD M
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K D V +++++S Y  +G+  EA  +F++MQ   +  +A T V+ + AC   +    G
Sbjct: 402 AVK-DTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 460

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
              H + +  G   +  + NALI MYA+CG++  +  V   + ++D VSWN+M+ G+  +
Sbjct: 461 RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIH 520

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L  +A   F E+   G  PD V  +  +SA    G ++ GK    + ++ G+      G
Sbjct: 521 GLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF-HVMRHGY------G 573

Query: 300 NTL-MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            T  M+ Y   C V+ + R  +   A +FI                         Q   L
Sbjct: 574 LTPRMEHY--ICMVDLLSRGGFLDEAYEFI-------------------------QSMPL 606

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIR---KGLSDLVILNAIVDVYGKCGNIDYS 415
            ADV +  ++L AC   K +   K++   I     +G  + V+L+   ++Y   G  D +
Sbjct: 607 RADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLS---NIYSAAGRFDEA 663

Query: 416 RNV 418
             V
Sbjct: 664 AEV 666


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 293/836 (35%), Positives = 479/836 (57%), Gaps = 3/836 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y K G +  A+++F+ +  + + TW AM+     NG     +  +  M    I    + 
Sbjct: 204  LYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYV 263

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               V+ A   ++  + G ++H LV+K G+ S  ++ N LVA+Y++      A ++F  M 
Sbjct: 264  LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMN 323

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             + D V +NS+IS     G    AL LF +MQR  L  +  T  + L AC        GM
Sbjct: 324  SR-DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGM 382

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            ++H+  +K+G +  + +  +L+ +Y++C  +  A       E ++ V WN ML  + Q D
Sbjct: 383  QLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLD 442

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                + + FR++Q  G  P+Q    + +     LG L  G+++H + IK GF  ++ + +
Sbjct: 443  NLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCS 502

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+DMYAK   +    R+  ++   D +SWT +IAGY Q++   +AL+LF  ++  G+  
Sbjct: 503  VLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQF 562

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
            D +   S + AC+G++ + Q ++IH      G  +DL I NA++ +Y +CG I  +   F
Sbjct: 563  DNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAF 622

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            E I  K+ +SW S++S    +G   EAL++F  M     E +  T  SA+SAA+SL+ +K
Sbjct: 623  EKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIK 682

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            +G++++  +++ G++ E  V++SL+ +YA+ G++  A + FN +  +++I W +MI    
Sbjct: 683  QGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYS 742

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             HG G  A+ LF +M+     P+H+TF+ +L ACSH GL+ EG  + E M   + L P  
Sbjct: 743  QHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKS 802

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            EHY C+VDLLGRA  L+ A ++++ M I   A +W  LL AC +H N E+GE  A  LLE
Sbjct: 803  EHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLE 862

Query: 660  LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            L+P +   YVLISN++A SR+W   +  R  M+  G+KK PG SWIE+ N +H+F A DK
Sbjct: 863  LEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDK 922

Query: 720  SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
             H  +++IY+ +  +  +   E GYV  +  +L+  E+ +K  + + HSE+LAIA+G+L 
Sbjct: 923  LHPLTNQIYEYIGHLNRRTS-EIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLS 981

Query: 780  STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                  IR+ KNLRVC DCH++ K VS++  R ++VRDA+RFHHF+ GVCSC D+W
Sbjct: 982  LGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 176/646 (27%), Positives = 335/646 (51%), Gaps = 7/646 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G    A ++FD+ S R+VF+WN M+  +V+     +V   + RM   GI+ + +TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 62  PCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             V+KAC       +   ++H      G+DS+  + N L+ +Y+K      A+++F+ + 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+V W ++IS  S +G   EA+ LF +M    +    Y   + L A        LG 
Sbjct: 223 MK-DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGE 281

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +K G + + YV N L+A+Y+R  K+  A  +   + ++D VS+NS+++G VQ  
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ F ++Q    KPD +   + +SA   +G L  G +LH++AIK G  +D+ +  
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEG 401

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+D+Y+KC  V    + F     ++ + W  ++  Y Q +    + E+FR +Q+EG+  
Sbjct: 402 SLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP 461

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           +     S+L  C+ L  +   ++IH ++I+ G   ++ + + ++D+Y K G +  +  + 
Sbjct: 462 NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRIL 521

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +   DVVSWT+MI+ YV + + +EAL+LF  M    ++ D+I   SA+SA + +  L+
Sbjct: 522 RRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALR 581

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +G++++      GF  + S+ ++L+ +YARCG +  A   F  +  K+ I W S+++   
Sbjct: 582 QGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLA 641

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPW 598
             G  + A+ +F +M       +  T+ + + A +    I +G++    +++  Y  D  
Sbjct: 642 QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY--DSE 699

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
            E    L+ L  ++  + +A++    M  E     W A++     H
Sbjct: 700 REVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQH 744



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 276/539 (51%), Gaps = 5/539 (0%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M   G+  +   +  +++ C     L    ++H  + K G+D    +++SLV  Y +  D
Sbjct: 49  MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              A ++FD    +  V  WN +I  + A     +   LFR M   G+  N YTF   L+
Sbjct: 109 QHGAVKVFDENSNR-SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLK 167

Query: 169 AC--EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           AC   D +F  +  ++H+ T   G +    VAN LI +Y++ G +  A  V   +  KD 
Sbjct: 168 ACVGGDIAFNYVK-QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDI 226

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           V+W +M++G  QN L  +A+  F ++  +   P      + +SAS ++     G++LH  
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            IK GF S+  + N L+ +Y++   +    R+F  M ++D +S+ ++I+G  Q     +A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDV 405
           LELF  +Q + L  D + + S+L AC+ +  + +  ++H + I+ G+S D+++  +++D+
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDL 406

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y KC +++ +   F   E++++V W  M+ +Y      +++ E+F  M    +  +  T 
Sbjct: 407 YSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTY 466

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S L   +SL  L  G++++  +I+ GF L   V S L+DMYA+ G L +A ++   +  
Sbjct: 467 PSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE 526

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            D++ WT+MI     H     A+ LF +ME      D+I F + + AC+    + +G++
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 184/369 (49%), Gaps = 6/369 (1%)

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G+L     LH    K GF  +  + ++L+D Y +    +   +VF + + +   SW  +I
Sbjct: 72  GSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMI 131

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK-CMSQTKEIHGYIIRKGL 393
             +     + +   LFR +  EG+  +      VL AC G     +  K++H      G 
Sbjct: 132 HVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGF 191

Query: 394 -SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
            S  ++ N ++D+Y K G I+ ++ VF  I  KD+V+W +MIS    NGL  EA+ LF  
Sbjct: 192 DSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCD 251

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M+ + +      L S LSA++ + + + G++L+  +I+ GF+ E  V + LV +Y+R   
Sbjct: 252 MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           L  A ++F+ + ++D + + S+I+     G    A++LF KM+ +   PD IT  +LL A
Sbjct: 312 LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371

Query: 573 CSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           C+  G +++G +     ++     D   E    L+DL  +   +E A++F    + E   
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADIILE--GSLLDLYSKCADVETAHKFFLXTETENIV 429

Query: 632 EVWCALLGA 640
            +W  +L A
Sbjct: 430 -LWNVMLVA 437


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 285/809 (35%), Positives = 472/809 (58%), Gaps = 8/809 (0%)

Query: 34  VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD 93
           ++NG   + + T   M   G   D  T+   +K C   +  D G  +H  + +       
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
             +NSL+++Y+KC  + KA  +F  MG   D++ W++++S ++ +     AL  F +M  
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARC-GKM 211
            G   N Y F AA +AC  + F ++G  I    +K+G     V V   LI M+ +  G +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  V  ++  +++V+W  M+T  +Q     +A+  F ++  +G +PD+      +SA 
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISAC 281

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM---GRVFYQMTAQDFI 328
             +  LL G++LH+ AI+ G   D  +G  L++MYAKC     M    ++F Q+   +  
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341

Query: 329 SWTTIIAGYAQNNCH-LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           SWT +I GY Q   +  +AL+LFR + L  +  +     S L AC+ L  +   +++  +
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401

Query: 388 IIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            ++ G S +  + N+++ +Y + G ID +R  F+ +  K+++S+ ++I +Y  N  + EA
Sbjct: 402 AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEA 461

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           LELF  + +  + + + T  S LS A+S+  + KG++++  +I+ G  L  SV ++L+ M
Sbjct: 462 LELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISM 521

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y+RCG ++ A +VF  ++ +++I WTS+I     HG    A++LF+KM  E   P+ +T+
Sbjct: 522 YSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTY 581

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           +A+L ACSH GL+NEG K  + M  ++ + P  EHYAC+VD+LGR+  L EA QF+ SM 
Sbjct: 582 IAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMP 641

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
            +  A VW   LGACRVH N ELG+  AK ++E +P +P  Y+L+SN++A+  KW +V  
Sbjct: 642 YKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSN 701

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           +R  M+   L K  G SW+E+ NK+H F   D SH ++ EIY +L  ++ K+++  GYV 
Sbjct: 702 IRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKL-GYVP 760

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
              FVLH+VEEE+K ++L+ HSE++A+A+G++ +++   IR+ KNLR+C DCHS  K +S
Sbjct: 761 NLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYIS 820

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
              GRE++VRDANRFHH + G CSC +YW
Sbjct: 821 MATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 172/585 (29%), Positives = 297/585 (50%), Gaps = 16/585 (2%)

Query: 1   MYGKCGSVLDAEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           +Y KCG    A  +F  + S R + +W+AM+  + +N    R L T+  M   G   + +
Sbjct: 110 LYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEY 169

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN-SLVAMYAKCY-DFRKARQLFD 117
            F    +AC+  + +  G  I G V+K GY  +D  V   L+ M+ K   D   A ++F+
Sbjct: 170 CFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFE 229

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           +M E+ + V W  +I+     G   EA+ LF +M   G   + +T    + AC +     
Sbjct: 230 KMPER-NAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLL 288

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARC---GKMTEAAGVLYQLENKDSVSWNSMLT 234
           LG ++H+  ++ G  L   V   LI MYA+C   G M  A  +  Q+ + +  SW +M+T
Sbjct: 289 LGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMIT 348

Query: 235 GFVQNDLYC-KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           G+VQ   Y  +A+  FR +      P+     + + A   L  L  G+++  +A+K GF 
Sbjct: 349 GYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFS 408

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S   + N+L+ MYA+   ++   + F  +  ++ IS+ T+I  YA+N    +ALELF  +
Sbjct: 409 SVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
           + +G+ A      S+L   + +  + + ++IH  +I+ GL  +  + NA++ +Y +CGNI
Sbjct: 469 EDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNI 528

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + +  VFE +E ++V+SWTS+I+ +  +G A +ALELF+ M E  V  + +T ++ LSA 
Sbjct: 529 ESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSAC 588

Query: 473 SSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLIL 530
           S + ++ +G K         G        + +VD+  R G+L  A +  N +  K D ++
Sbjct: 589 SHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALV 648

Query: 531 WTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           W + + A  +HG    GK A  +   +E E   P     L+ LYA
Sbjct: 649 WRTFLGACRVHGNLELGKHAAKMI--IEQEPHDPAAYILLSNLYA 691


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 293/836 (35%), Positives = 479/836 (57%), Gaps = 3/836 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y K G +  A+++F+ +  + + TW AM+     NG     +  +  M    I    + 
Sbjct: 204  LYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYV 263

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               V+ A   ++  + G ++H LV+K G+ S  ++ N LVA+Y++      A ++F  M 
Sbjct: 264  LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMN 323

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             + D V +NS+IS     G    AL LF +MQR  L  +  T  + L AC        GM
Sbjct: 324  SR-DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGM 382

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            ++H+  +K+G +  + +  +L+ +Y++C  +  A       E ++ V WN ML  + Q D
Sbjct: 383  QLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLD 442

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                + + FR++Q  G  P+Q    + +     LG L  G+++H + IK GF  ++ + +
Sbjct: 443  NLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCS 502

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+DMYAK   +    R+  ++   D +SWT +IAGY Q++   +AL+LF  ++  G+  
Sbjct: 503  VLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQF 562

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
            D +   S + AC+G++ + Q ++IH      G  +DL I NA++ +Y +CG I  +   F
Sbjct: 563  DNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAF 622

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            E I  K+ +SW S++S    +G   EAL++F  M     E +  T  SA+SAA+SL+ +K
Sbjct: 623  EKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIK 682

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            +G++++  +++ G++ E  V++SL+ +YA+ G++  A + FN +  +++I W +MI    
Sbjct: 683  QGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYS 742

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             HG G  A+ LF +M+     P+H+TF+ +L ACSH GL+ EG  + E M   + L P  
Sbjct: 743  QHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKS 802

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            EHY C+VDLLGRA  L+ A ++++ M I   A +W  LL AC +H N E+GE  A  LLE
Sbjct: 803  EHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLE 862

Query: 660  LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            L+P +   YVLISN++A SR+W   +  R  M+  G+KK PG SWIE+ N +H+F A DK
Sbjct: 863  LEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDK 922

Query: 720  SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
             H  +++IY+ +  +  +   E GYV  +  +L+  E+ +K  + + HSE+LAIA+G+L 
Sbjct: 923  LHPLTNQIYEYIGHLNRRTS-EIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLS 981

Query: 780  STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                  IR+ KNLRVC DCH++ K VS++  R ++VRDA+RFHHF+ GVCSC D+W
Sbjct: 982  LGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 176/646 (27%), Positives = 335/646 (51%), Gaps = 7/646 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G    A ++FD+ S R+VF+WN M+  +V+     +V   + RM   GI+ + +TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 62  PCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             V+KAC       +   ++H      G+DS+  + N L+ +Y+K      A+++F+ + 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+V W ++IS  S +G   EA+ LF +M    +    Y   + L A        LG 
Sbjct: 223 MK-DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGE 281

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +K G + + YV N L+A+Y+R  K+  A  +   + ++D VS+NS+++G VQ  
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ F ++Q    KPD +   + +SA   +G L  G +LH++AIK G  +D+ +  
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEG 401

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+D+Y+KC  V    + F     ++ + W  ++  Y Q +    + E+FR +Q+EG+  
Sbjct: 402 SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP 461

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           +     S+L  C+ L  +   ++IH ++I+ G   ++ + + ++D+Y K G +  +  + 
Sbjct: 462 NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRIL 521

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +   DVVSWT+MI+ YV + + +EAL+LF  M    ++ D+I   SA+SA + +  L+
Sbjct: 522 RRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALR 581

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +G++++      GF  + S+ ++L+ +YARCG +  A   F  +  K+ I W S+++   
Sbjct: 582 QGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLA 641

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPW 598
             G  + A+ +F +M       +  T+ + + A +    I +G++    +++  Y  D  
Sbjct: 642 QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY--DSE 699

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
            E    L+ L  ++  + +A++    M  E     W A++     H
Sbjct: 700 REVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQH 744



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 277/539 (51%), Gaps = 5/539 (0%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M   G+  +   +  +++ C     L    ++H  + K G+D    +++SLV  Y +  D
Sbjct: 49  MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              A ++FD    +  V  WN +I  + A     +   LFR M   G+  N YTF   L+
Sbjct: 109 QHGAVKVFDENSNR-SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLK 167

Query: 169 AC--EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           AC   D +F  +  ++H+ T   G +    VAN LI +Y++ G +  A  V   +  KD 
Sbjct: 168 ACVGGDIAFNYVK-QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDI 226

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           V+W +M++G  QN L  +A+  F ++  +   P      + +SAS ++     G++LH  
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            IK GF S+  + N L+ +Y++   +    R+F  M ++D +S+ ++I+G  Q     +A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDV 405
           LELF  +Q + L  D + + S+L AC+ +  + +  ++H + I+ G+S D+++  +++D+
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDL 406

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y KC +++ +   F + E++++V W  M+ +Y      +++ E+F  M    +  +  T 
Sbjct: 407 YSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTY 466

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S L   +SL  L  G++++  +I+ GF L   V S L+DMYA+ G L +A ++   +  
Sbjct: 467 PSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE 526

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            D++ WT+MI     H     A+ LF +ME      D+I F + + AC+    + +G++
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G+L     LH    K GF  +  + ++L+D Y +    +   +VF + + +   SW  +I
Sbjct: 72  GSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMI 131

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK-CMSQTKEIHGYIIRKGL 393
             +     + +   LFR +  EG+  +      VL AC G     +  K++H      G 
Sbjct: 132 HVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGF 191

Query: 394 -SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
            S  ++ N ++D+Y K G I+ ++ VF  I  KD+V+W +MIS    NGL  EA+ LF  
Sbjct: 192 DSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCD 251

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M+ + +      L S LSA++ + + + G++L+  +I+ GF+ E  V + LV +Y+R   
Sbjct: 252 MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           L  A ++F+ + ++D + + S+I+     G    A++LF KM+ +   PD IT  +LL A
Sbjct: 312 LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371

Query: 573 CSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           C+  G +++G +     ++     D   E    L+DL  +   +E A++F  + + E   
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADIILE--GSLLDLYSKCADVETAHKFFLTTETENIV 429

Query: 632 EVWCALLGA 640
            +W  +L A
Sbjct: 430 -LWNVMLVA 437


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 309/860 (35%), Positives = 495/860 (57%), Gaps = 37/860 (4%)

Query: 1    MYGKCGSVLD-AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR--VLG--IS 55
            MYG    ++D A + FD +  R + + N+M+  Y   G+ +   + +S M+  V+G  + 
Sbjct: 220  MYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLK 279

Query: 56   VDAFTFPCVIKACAMLKDLDCGAKIHGLVL---------KCGYDSTDFIVNSLVAMYAKC 106
             + +TF  +I A        C     GLVL         K G+    ++ ++LV+ +AK 
Sbjct: 280  PNEYTFGSLISAT-------CSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKA 332

Query: 107  YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFV- 164
                 A+ +F +M  + +VV  N +I       +  EA+ LF EM+  V L  N+Y  + 
Sbjct: 333  GSIGYAKNIFQKMSYR-NVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIIL 391

Query: 165  ---AALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQ 220
                     E+   +  G E+HA  ++SG  N Q+ + N LI MYA+CG + +A  V   
Sbjct: 392  TAFPEFHVLENGKRK--GSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRL 449

Query: 221  LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
            ++NKDSV+WNSM+TG  QN  + +A++ F+E++     P     ++A+S+   LG +  G
Sbjct: 450  MDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVG 509

Query: 281  KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
            ++LH   +K G   D+ + N L+ +Y +C  V    + F  M   D +SW ++I   A +
Sbjct: 510  EQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADS 569

Query: 341  NCH-LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
                L+A+E F  +   G D + +   ++L A S L      K+IH  ++++ ++ D  I
Sbjct: 570  EPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAI 629

Query: 399  LNAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
             NA++  YGKCG++ Y  N+F  + + +D VSW SMIS Y+HN L  +A+++ + M +  
Sbjct: 630  ENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKG 689

Query: 458  VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
               D  T  + LSA ++++ L++G E++G  +R     +  + S+LVDMYA+CG +D A+
Sbjct: 690  QRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYAS 749

Query: 518  KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            + F  +  ++L  W SMI+    HG G  ++DLF +M+ +   PDH+TF+ +L ACSH+G
Sbjct: 750  RFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAG 809

Query: 578  LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
            L+NEG    + M   Y L P  EH++C+VDLLGR   L +   F+  M ++P   +W  +
Sbjct: 810  LVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTV 869

Query: 638  LGA-CRVHS-NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
            LGA CR +  N  LG   A+ LLE++P N  NY+L+SN++A+  KW DV + R+ MR + 
Sbjct: 870  LGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAF 929

Query: 696  LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
            +KK  G SW+ + + +H F+A DKSH E D IY+KL E+  K+ R  GY+ +T+F L+++
Sbjct: 930  VKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKM-RLAGYIPETRFALYDL 988

Query: 756  EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
            E E K ++L  HSE++A+A+ VL       IRI KNLRVC DCHS  K +S++  R++V+
Sbjct: 989  EGESKEELLSYHSEKIAVAF-VLTRPSKMPIRILKNLRVCGDCHSAFKYISQIVERQIVL 1047

Query: 816  RDANRFHHFEAGVCSCGDYW 835
            RD+NRFHHFE G CSCGD+W
Sbjct: 1048 RDSNRFHHFENGKCSCGDFW 1067



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 173/645 (26%), Positives = 326/645 (50%), Gaps = 26/645 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G +    ++FD++  R + +W+ ++  Y  N  P    E + +M   G   + + 
Sbjct: 117 IYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYA 176

Query: 61  FPCVIKACAMLKD--LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK-ARQLFD 117
           F  VI+AC    +  L  G +IHGL+ K  Y +     N L++MY         AR+ FD
Sbjct: 177 FGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFD 236

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV----GLVTNAYTFVAALQA-CED 172
            +  +  V L NS+IS Y   G  + A  +F  MQ+     GL  N YTF + + A C  
Sbjct: 237 SIWPRNLVSL-NSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSL 295

Query: 173 SSFETLGMEIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           ++   + +E     V KSG    +YV +AL++ +A+ G +  A  +  ++  ++ VS N 
Sbjct: 296 ANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNG 355

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGK----ELHAY 286
           ++ G V+     +A++ F E++ + +  P+    +  ++A      L NGK    E+HA+
Sbjct: 356 LIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMII--LTAFPEFHVLENGKRKGSEVHAF 413

Query: 287 AIKQGFV-SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
            I+ G + + + IGN L++MYAKC  +N    VF  M  +D ++W ++I G  QN   L+
Sbjct: 414 LIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLE 473

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVD 404
           A++ F+ ++   L      + S L +C+ L  +S  +++H   ++ GL  D+ + NA++ 
Sbjct: 474 AVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLA 533

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN-EALELFYLMNEANVESDSI 463
           +YG+CG +   +  F  +   D VSW S+I +   +  +  EA+E F +M  A  + + +
Sbjct: 534 LYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRV 593

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T ++ L+A SSLS+ + GK+++  ++++    + ++ ++L+  Y +CG +     +F+ +
Sbjct: 594 TFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRM 653

Query: 524 QTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
             + D + W SMI+    +     A+D+ + M  +    D  TF  +L AC+    +  G
Sbjct: 654 SDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERG 713

Query: 583 KKFLEIMRCDYQ--LDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
              +E+  C  +  L+      + LVD+  +   ++ A +F   M
Sbjct: 714 ---MEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMM 755



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 278/542 (51%), Gaps = 26/542 (4%)

Query: 65  IKACAMLKDLDCGAK----IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           I++ A      CG+K    +H  + K G+ +  F+ N+L+ +YA+  D    R++FD M 
Sbjct: 76  IESLAQRYRYSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMP 135

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL-- 178
            + ++V W+ +IS Y+ +    EA  LFR+M   G + N Y F + ++AC++     L  
Sbjct: 136 LR-NLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKF 194

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY-QLENKDSVSWNSMLTGFV 237
           GM+IH    K+     V  +N LI+MY     M + A   +  +  ++ VS NSM++ + 
Sbjct: 195 GMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYC 254

Query: 238 QNDLYCKAMQFF----RELQGAGQKPDQVCTVNAVSASGRLGN--LLNGKELHAYAIKQG 291
           Q      A   F    +E+ G G KP++    + +SA+  L N  L+  ++L     K G
Sbjct: 255 QRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSG 314

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F+ DL +G+ L+  +AK   + Y   +F +M+ ++ +S   +I G  +     +A+ELF 
Sbjct: 315 FLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFM 374

Query: 352 TVQ--LEGLDADVMIIGSVLMACSGLKCMSQTK----EIHGYIIRKGL--SDLVILNAIV 403
            ++  +E      MII   L A      +   K    E+H ++IR GL  + + I N ++
Sbjct: 375 EMKDSVELNPNSYMII---LTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLI 431

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           ++Y KCG I+ +  VF  +++KD V+W SMI+    N    EA++ F  M    +   + 
Sbjct: 432 NMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNF 491

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T++SALS+ +SL  +  G++L+   ++ G +L+ SV+++L+ +Y  CG +    K F+ +
Sbjct: 492 TMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLM 551

Query: 524 QTKDLILWTSMINANGLHGRGKV-AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
              D + W S+I A        + A++ F  M    + P+ +TF+ +L A S   L   G
Sbjct: 552 LDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELG 611

Query: 583 KK 584
           K+
Sbjct: 612 KQ 613



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 254/518 (49%), Gaps = 31/518 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H    K+G    +++ N LI +YAR G +     V  ++  ++ VSW+ +++G+ +N 
Sbjct: 94  ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNR 153

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN--LLNGKELHAYAIKQGFVSDLQI 298
           +  +A + FR++   G  P+     + + A    G   L  G ++H    K  +V+D+  
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTA 213

Query: 299 GNTLMDMYAKCC-CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE- 356
            N L+ MY      V+Y  R F  +  ++ +S  ++I+ Y Q    + A ++F T+Q E 
Sbjct: 214 SNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEV 273

Query: 357 ---GLDADVMIIGSVL-----MACSGLKCMSQ---TKEIHGYIIRKGLSDLVILNAIVDV 405
              GL  +    GS++     +A SGL  + Q     E  G+     L DL + +A+V  
Sbjct: 274 MGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGF-----LHDLYVGSALVSG 328

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           + K G+I Y++N+F+ +  ++VVS   +I   V      EA+ELF  M ++ VE +  + 
Sbjct: 329 FAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS-VELNPNSY 387

Query: 466 VSALSAASSLSIL----KKGKELNGFIIRKG-FNLEGSVASSLVDMYARCGALDIANKVF 520
           +  L+A     +L    +KG E++ F+IR G  N + ++ + L++MYA+CGA++ A  VF
Sbjct: 388 MIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVF 447

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
             +  KD + W SMI     + +   A+  F +M      P + T ++ L +C+  G I+
Sbjct: 448 RLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWIS 507

Query: 581 EGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
            G++   E ++    LD    +   L+ L G   +++E  Q   S+ ++     W +L+G
Sbjct: 508 VGEQLHCEGLKLGLDLDVSVSN--ALLALYGECGYVKEC-QKAFSLMLDYDHVSWNSLIG 564

Query: 640 ACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           A    S   + E V   L+ +  G   N V    + AA
Sbjct: 565 AL-ADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAA 601


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 291/776 (37%), Positives = 448/776 (57%), Gaps = 38/776 (4%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY------------------ 135
           +  N L+   +K      AR+LFD+M +K++   WN++IS+Y                  
Sbjct: 66  YQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYS-WNTMISSYVNVGRLVEARELFDGCSC 124

Query: 136 --------SASGQC-----LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
                     SG C     +EA  LFR M+  G   + +T  + L+ C        G  I
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNSMLTGFVQND 240
           H   VK+G    V+V   L+ MYA+C  ++EA  +   LE   K+ V W +M+TG+ QN 
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNG 244

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA++FFR +   G + +Q      ++A   +     G+++H + +K GF S++ + +
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQS 304

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  +     +   M   D +SW +++ G+ ++    +AL LF+ +    +  
Sbjct: 305 ALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKI 364

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVF 419
           D     SVL  C  +      K +HG II+ G  +  ++ NA+VD+Y K G++D +  VF
Sbjct: 365 DDYTFPSVLNCC--VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVF 422

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  KDV+SWTS+++ Y  N    E+L++F  M    V  D   + S LSA + L++L+
Sbjct: 423 EKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLE 482

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GK+++   I+ G     SV +SLV MYA+CG LD A+ +F  +Q KD+I WT++I    
Sbjct: 483 FGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYA 542

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            +G+G+ ++  +  M +    PD ITF+ LL+ACSH+GL++EG+K+ + M   Y + P P
Sbjct: 543 QNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGP 602

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC++DL GR+  L+EA Q +  M ++P A VW +LL ACRVH N EL E  A  L E
Sbjct: 603 EHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFE 662

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P N   YV++SN+++ASRKW DV ++R  M+  G+ K PG SW+EI +++++FI+ D+
Sbjct: 663 LEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDR 722

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H    EIY K+ EI  ++ +E GYV    F LH++++E K   L  HSE+LA+A+G+L 
Sbjct: 723 GHPREAEIYTKIDEIILRI-KEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLA 781

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +   + IRI KNLRVC DCHS  K +SR+F R +++RD+N FHHF  G CSCGDYW
Sbjct: 782 APPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837



 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 181/573 (31%), Positives = 304/573 (53%), Gaps = 37/573 (6%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE------------------------- 38
           K G V DA +LFDK+ Q+  ++WN M+ +YV+ G                          
Sbjct: 77  KSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISG 136

Query: 39  ------PLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDST 92
                  +   + +  MR+ G     FT   V++ C+ L  +  G  IHG V+K G++  
Sbjct: 137 YCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGN 196

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMG-EKEDVVLWNSIISAYSASGQCLEALGLFREM 151
            F+V  LV MYAKC    +A  LF  +  ++++ VLW ++++ Y+ +G   +A+  FR M
Sbjct: 197 VFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYM 256

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
              G+  N YTF   L AC        G ++H   VKSG    VYV +AL+ MYA+CG +
Sbjct: 257 HAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDL 316

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  +L  +E+ D VSWNS++ GFV++ L  +A++ F+ + G   K D   T  +V   
Sbjct: 317 KNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDY-TFPSVLNC 375

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             +G+ +N K +H   IK GF +   + N L+DMYAK   ++    VF +M  +D ISWT
Sbjct: 376 CVVGS-INPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWT 434

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
           +++ GYAQNN H ++L++F  +++ G++ D  I+ S+L AC+ L  +   K++H   I+ 
Sbjct: 435 SLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKS 494

Query: 392 GLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           GL     + N++V +Y KCG +D +  +F S++ KDV++WT++I  Y  NG    +L+ +
Sbjct: 495 GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFY 554

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYAR 509
             M  +    D IT +  L A S   ++ +G++    + +  G        + ++D++ R
Sbjct: 555 DAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGR 614

Query: 510 CGALDIANKVFNCVQTK-DLILWTSMINANGLH 541
            G LD A ++ + +  K D  +W S+++A  +H
Sbjct: 615 SGKLDEAKQLLDQMDVKPDATVWKSLLSACRVH 647



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 143/453 (31%), Positives = 238/453 (52%), Gaps = 19/453 (4%)

Query: 1   MYGKCGSVLDAEQLFD--KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY KC  V +AE LF   +  ++    W AM+  Y  NG+  + +E +  M   G+  + 
Sbjct: 206 MYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQ 265

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           +TFP ++ AC+ +     G ++HG ++K G+ S  ++ ++LV MYAKC D + A+ + + 
Sbjct: 266 YTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLET 325

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M E +DVV WNS++  +   G   EAL LF+ M    +  + YTF + L  C   S    
Sbjct: 326 M-EDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINP- 383

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
              +H   +K+G      V+NAL+ MYA+ G M  A  V  ++  KD +SW S++TG+ Q
Sbjct: 384 -KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQ 442

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N+ + ++++ F +++  G  PDQ    + +SA   L  L  GK++H   IK G      +
Sbjct: 443 NNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSV 502

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N+L+ MYAKC C++    +F  M  +D I+WT II GYAQN     +L+ +  +   G 
Sbjct: 503 YNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGT 562

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             D +    +L ACS       G K   Q  +++G  I+ G      +   +D++G+ G 
Sbjct: 563 RPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYG--IKPGPEHYACM---IDLFGRSGK 617

Query: 412 IDYSRNVFESIESK-DVVSWTSMISS-YVHNGL 442
           +D ++ + + ++ K D   W S++S+  VH  L
Sbjct: 618 LDEAKQLLDQMDVKPDATVWKSLLSACRVHENL 650


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 292/835 (34%), Positives = 478/835 (57%), Gaps = 6/835 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YG  G V  + ++F+++  R V +W +++  Y   GEP  V++ Y  MR  G+  +  +
Sbjct: 86  LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 145

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +C +LKD   G +I G V+K G +S   + NSL++M     +   A  +FD+M 
Sbjct: 146 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 205

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D + WNSI +AY+ +G   E+  +F  M+R     N+ T    L        +  G 
Sbjct: 206 ER-DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   VK G +  V V N L+ MYA  G+  EA  V  Q+  KD +SWNS++  FV + 
Sbjct: 265 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 324

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+     +  +G+  + V   +A++A         G+ LH   +  G   +  IGN
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 384

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MY K   ++   RV  QM  +D ++W  +I GYA++    KAL  F+T+++EG+ +
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 444

Query: 361 DVMIIGSVLMAC--SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
           + + + SVL AC   G   + + K +H YI+  G  SD  + N+++ +Y KCG++  S++
Sbjct: 445 NYITVVSVLSACLLPG-DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  ++++++++W +M+++  H+G   E L+L   M    V  D  +    LSAA+ L++
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L++G++L+G  ++ GF  +  + ++  DMY++CG +    K+      + L  W  +I+A
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 623

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G HG  +     F++M      P H+TF++LL ACSH GL+++G  + +++  D+ L+P
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 683

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EH  C++DLLGR+  L EA  F+  M ++P   VW +LL +C++H N + G   A+ L
Sbjct: 684 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 743

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
            +L+P +   YVL SN+FA + +W+DVE VR +M    +KK    SW+++ +K+ SF   
Sbjct: 744 SKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG 803

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D++H ++ EIY KL +I +KL +E GYVA T   L + +EE+K   L+ HSERLA+AY +
Sbjct: 804 DRTHPQTMEIYAKLEDI-KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 862

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           + + EGS +RI KNLR+C DCHS  K VSR+ GR +V+RD  RFHHFE G+   G
Sbjct: 863 MSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKG 917



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 182/661 (27%), Positives = 316/661 (47%), Gaps = 45/661 (6%)

Query: 21  RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKAC----AMLKDLDC 76
           R   +WN M+   V  G  L  +E + +M  LGI   +F    ++ AC    +M ++   
Sbjct: 4   RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE--- 60

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G ++HG V K G  S  ++  +++ +Y        +R++F+ M ++ +VV W S++  YS
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR-NVVSWTSLMVGYS 119

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
             G+  E + +++ M+  G+  N  +    + +C     E+LG +I    VKSG   ++ 
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V N+LI+M    G +  A  +  Q+  +D++SWNS+   + QN    ++ + F  ++   
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            + +       +S  G + +   G+ +H   +K GF S + + NTL+ MYA         
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            VF QM  +D ISW +++A +  +   L AL L  ++   G   + +   S L AC    
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
              + + +HG ++  GL  + +I NA+V +YGK G +  SR V   +  +DVV+W ++I 
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAA-SSLSILKKGKELNGFIIRKGFN 494
            Y  +   ++AL  F  M    V S+ IT+VS LSA      +L++GK L+ +I+  GF 
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 479

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            +  V +SL+ MYA+CG L  +  +FN +  +++I W +M+ AN  HG G+  + L  KM
Sbjct: 480 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFL--------------------------EI 588
            +   + D  +F   L A +   ++ EG++                            EI
Sbjct: 540 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 599

Query: 589 MRCDYQLDP-----WPEHYACLVDLLGRANHLEE---AYQFVRSMQIEPTAEVWCALLGA 640
                 L P      P  +  L+  LGR  + EE    +  +  M I+P    + +LL A
Sbjct: 600 GEVVKMLPPSVNRSLPS-WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 658

Query: 641 C 641
           C
Sbjct: 659 C 659



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 129/256 (50%), Gaps = 2/256 (0%)

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM-SQ 380
           M  ++ +SW T+++G  +   +L+ +E FR +   G+     +I S++ AC     M  +
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 381 TKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
             ++HG++ + G LSD+ +  AI+ +YG  G +  SR VFE +  ++VVSWTS++  Y  
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
            G   E ++++  M    V  +  ++   +S+   L     G+++ G +++ G   + +V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            +SL+ M    G +D AN +F+ +  +D I W S+  A   +G  + +  +F  M     
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240

Query: 560 APDHITFLALLYACSH 575
             +  T   LL    H
Sbjct: 241 EVNSTTVSTLLSVLGH 256


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 284/796 (35%), Positives = 462/796 (58%), Gaps = 48/796 (6%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK-------CYD 108
           V+   +  +I+ C        G  IH  ++  GY+   +++  ++ +YA+       CY 
Sbjct: 69  VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCY- 127

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              AR+LF+ M E+ ++  WN++I AY+     +EA G+F  M ++G+  + +TF +AL+
Sbjct: 128 ---ARKLFEEMPER-NLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALR 183

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
            C        G ++H+  +  G     +V NALI MYA+C        V  ++  ++ V+
Sbjct: 184 VCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVT 243

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGA--GQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           WNS+++   Q   +  A+  F  +Q +  G +PDQ      ++      N   G+++HA+
Sbjct: 244 WNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAH 303

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            I+     ++ +   L+ MY++C  +NY   +F +M  ++  SW ++I GY QN    +A
Sbjct: 304 LIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEA 363

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI-VDV 405
           L LF+ +QL G+  D   + S+L +C  L    + +E+H +I+R  + +  IL  + VD+
Sbjct: 364 LRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDM 423

Query: 406 YGKCGNIDYSRNVFESIESKD--VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           Y KCG++DY+  V++    KD     W S+++ Y + GL  E+   F  M E+++E D +
Sbjct: 424 YAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVL 483

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T+V+ ++    L +L+                     ++LVDMY++CGA+  A  VF+ +
Sbjct: 484 TMVTIVN----LLVLE---------------------TALVDMYSKCGAITKARTVFDNM 518

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
             K+++ W +MI+    HG  K A+ L+ +M  +   P+ +TFLA+L ACSH+GL+ EG 
Sbjct: 519 NGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGL 578

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRV 643
           +    M+ DY ++   EHY C+VDLLGRA  LE+A +FV  M IEP    W ALLGACRV
Sbjct: 579 RIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRV 638

Query: 644 HSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
           H + ++G + A++L ELDP NPG YV++SN++AA+ +WK+VE +R  M+  G+KK PG S
Sbjct: 639 HKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVS 698

Query: 704 WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREG-GYVAQTQFVLHNVEE---EE 759
           WIEI ++I  F A  K+H +++EIY  L  +T  L+ +G GY+  T F+L NV++   EE
Sbjct: 699 WIEINSEIQIFHAGSKTHPKTEEIYNNLRHLT--LQSKGLGYIPDTSFILQNVKDIKEEE 756

Query: 760 KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDAN 819
           + + L  HSERLA++ G++   + S IR+ KNLR+C DCH+  K +S++ GR ++ RD N
Sbjct: 757 EEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTN 816

Query: 820 RFHHFEAGVCSCGDYW 835
           RFHHFE G CSCGDYW
Sbjct: 817 RFHHFENGKCSCGDYW 832



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 161/575 (28%), Positives = 299/575 (52%), Gaps = 41/575 (7%)

Query: 1   MYGKCGSVLD---AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
           +Y + G + D   A +LF+++ +R +  WN M+ AY    + +     + RM  +G+  D
Sbjct: 115 LYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPD 174

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            FTF   ++ C  L+  D G ++H  ++ CG+    F+ N+L+ MYAKC D     ++FD
Sbjct: 175 NFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFD 234

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV--GLVTNAYTFVAALQACEDSSF 175
            MGE+  V  WNSIISA +  G   +AL LF  MQ    G+  + +TF   L  C +   
Sbjct: 235 EMGERNQVT-WNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRN 293

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           +  G +IHA  +++     + V   L+ MY+ CG++  A  +  ++  +++ SWNSM+ G
Sbjct: 294 DNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEG 353

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           + QN    +A++ F+++Q  G KPD     + +S+   L +   G+ELH + ++     +
Sbjct: 354 YQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEE 413

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS--WTTIIAGYAQNNCHLKALELFRTV 353
             +   L+DMYAKC  ++Y  +V+ Q   +D  +  W +I+AGYA      ++   F  +
Sbjct: 414 GILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEM 473

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
               ++ DV+ + ++                        ++ LV+  A+VD+Y KCG I 
Sbjct: 474 LESDIEYDVLTMVTI------------------------VNLLVLETALVDMYSKCGAIT 509

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +R VF+++  K++VSW +MIS Y  +G + EAL L+  M +  +  + +T ++ LSA S
Sbjct: 510 KARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACS 569

Query: 474 SLSILKKGKELNGFI-IRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLI 529
              ++++G  L  F  +++ +N+E      + +VD+  R G L+ A +    +  + ++ 
Sbjct: 570 HTGLVEEG--LRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVS 627

Query: 530 LWTSMINANGLH---GRGKVAIDLFYKMEAESFAP 561
            W +++ A  +H     G++A    ++++ ++  P
Sbjct: 628 TWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGP 662


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 296/763 (38%), Positives = 455/763 (59%), Gaps = 10/763 (1%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
            H  VLK G+DS  F+ N+L+ +Y +  D   AR+LFD M ++  V  W  +IS Y+ +G
Sbjct: 22  FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVT-WACLISGYTQNG 80

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS-FETLGMEIHAATVKSGQN-LQVYV 197
              +A G+ +EM   G + N + F +A++AC++S  +   G ++H   +++G N  +V V
Sbjct: 81  MPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAV 140

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
            N LI MYA+CG +  A  V   + +KDSVSWNSM+TG  QN  +  A++ +  ++  G 
Sbjct: 141 GNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGL 200

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
            P     ++A+S+   LG +L G++ H   IK G   D+ + NTL+ +YA+   +    +
Sbjct: 201 MPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQK 260

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHL-KALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           VF  M  +D +SW T+I   A +   + +A+E+F  +   G   + +   ++L   S L 
Sbjct: 261 VFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLS 320

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMI 434
               + +IH  I++  +  D  I NA++  YGK G ++    +F  + E +D VSW SMI
Sbjct: 321 TSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           S Y+HN L  +A++L +LM +     D  T  + LSA ++++ L+ G E++   IR    
Sbjct: 381 SGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLE 440

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            +  + S+LVDMY++CG +D A++ FN +  ++L  W SMI+    HG G  A+ LF +M
Sbjct: 441 SDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRM 500

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
           +     PDHITF+ +L ACSH GL++EG ++ + M   Y L P  EHY+C+VDLLGRA  
Sbjct: 501 KLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGE 560

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGA-CRVHSNK-ELGEIVAKKLLELDPGNPGNYVLIS 672
           L++   F+  M I+P   +W  +LGA CR +  K ELG   A+ L  +DP N  NYVL+S
Sbjct: 561 LDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLS 620

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           N++A+  KW+D+ + R  MR + +KK  G SW+ + + +H F+A D SH E   IY KL 
Sbjct: 621 NMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLK 680

Query: 733 EITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNL 792
           E+ +K+ R+ GYV Q +F L+++E E K ++L  HSE+LA+A+ VL    G  IRI KNL
Sbjct: 681 ELDKKI-RDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNL 738

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           RVC DCHS  K +S++  R +V+RD+NRFHHFE G CSC DYW
Sbjct: 739 RVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 170/572 (29%), Positives = 281/572 (49%), Gaps = 17/572 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G  + A +LFD++  R   TW  ++  Y  NG P         M   G   + F 
Sbjct: 44  VYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFA 103

Query: 61  FPCVIKAC--AMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFD 117
           F   I+AC  +ML     G ++HG  ++ G +     V N L+ MYAKC D   AR +F 
Sbjct: 104 FGSAIRACQESMLWRRK-GRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFG 162

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLE-ALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
            M +K D V WNS+I+    + +C E A+  +  M++ GL+ + +  ++AL +C      
Sbjct: 163 LMVDK-DSVSWNSMITGLDQN-KCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCI 220

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            LG + H   +K G ++ V V+N L+A+YA   ++ E   V   +  +D VSWN+++   
Sbjct: 221 LLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGAL 280

Query: 237 VQNDL-YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
             +     +A++ F E+  AG  P++V  +N ++    L       ++HA  +K     D
Sbjct: 281 ADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDD 340

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTA-QDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
             I N L+  Y K   +     +F +M+  +D +SW ++I+GY  N    KA++L   + 
Sbjct: 341 NAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMM 400

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
             G   D     +VL AC+ +  +    E+H   IR  L SD+VI +A+VD+Y KCG ID
Sbjct: 401 QRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRID 460

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           Y+   F  +  +++ SW SMIS Y  +G  + AL LF  M  +    D IT V  LSA S
Sbjct: 461 YASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACS 520

Query: 474 SLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILW 531
            + ++ +G E         G        S +VD+  R G LD      N +  K ++++W
Sbjct: 521 HIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIW 580

Query: 532 TSMINA----NGLHGR-GKVAIDLFYKMEAES 558
            +++ A    NG     G+ A ++ + M+ ++
Sbjct: 581 RTVLGACCRGNGRKTELGRRAAEMLFNMDPQN 612


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 286/730 (39%), Positives = 443/730 (60%), Gaps = 8/730 (1%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           ARQ+FDR+    D   +N++I AYS  G    A+ L+R M    +  N YTF   L+AC 
Sbjct: 52  ARQVFDRI-PAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACS 110

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
             +    G  IHA     G +  ++V+ ALI +Y RC +   AA V  ++  +D V+WN+
Sbjct: 111 ALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNA 170

Query: 232 MLTGFVQNDLYCKAMQFFRELQG-AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           ML G+  + +Y  A+    ++Q   G +P+    V+ +    + G L  G  +HAY ++ 
Sbjct: 171 MLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRA 230

Query: 291 GFVSD---LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
               +   + IG  L+DMYAKC  + Y  RVF+ MT ++ ++W+ +I G+   +   +A 
Sbjct: 231 YLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAF 290

Query: 348 ELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDV 405
            LF+ + +EG+       + S L  C+ L  +    ++H  + + G+ +DL   N+++ +
Sbjct: 291 NLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSM 350

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y K G I+ +  +F+ I  KD +S+ +++S YV NG A EA  +F  M   NV+ D  T+
Sbjct: 351 YAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATM 410

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
           VS + A S L+ L+ G+  +G +I +G  LE S+ +SL+DMYA+CG +D++ +VF+ +  
Sbjct: 411 VSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPA 470

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           +D++ W +MI   G+HG GK A  LF  M+ + F PD +TF+ L+ ACSHSGL+ EGK +
Sbjct: 471 RDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHW 530

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
            + M   Y + P  EHY C+VDLL R   L+EAYQF++SM ++    VW ALLGACR+H 
Sbjct: 531 FDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHK 590

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           N +LG+ V++ + +L P   GN+VL+SN+F+A+ ++ +  +VR+  +  G KK+PG SWI
Sbjct: 591 NIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWI 650

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
           EI   +H+F+  D+SH  S +IY +L  I   +++  GY A T FVL ++EEEEK + L 
Sbjct: 651 EINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKL-GYQADTSFVLQDLEEEEKEKALL 709

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
            HSE+LAIA+GVL   E   I +TKNLRVC DCH+  K ++ +  R ++VRDANRFHHF+
Sbjct: 710 YHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFK 769

Query: 826 AGVCSCGDYW 835
            G CSCGD+W
Sbjct: 770 NGQCSCGDFW 779



 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 168/549 (30%), Positives = 283/549 (51%), Gaps = 19/549 (3%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A Q+FD++       +NA++ AY   G     ++ Y  M    +  + +TFP V+
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KAC+ L DL  G  IH      G  +  F+  +L+ +Y +C  F  A  +F +M  + DV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMR-DV 165

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           V WN++++ Y+  G    A+    +MQ R GL  NA T V+ L           G  +HA
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225

Query: 185 ATVKS--GQN-LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
             +++   QN  QV +  AL+ MYA+C  +  A  V + +  ++ V+W++++ GFV  D 
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDR 285

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSAS------GRLGNLLNGKELHAYAIKQGFVSD 295
             +A   F+++   G     +C ++A S +        L +L  G +LHA   K G  +D
Sbjct: 286 MTEAFNLFKDMLVEG-----MCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHAD 340

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           L  GN+L+ MYAK   +N    +F ++  +D IS+  +++GY QN    +A  +F+ +Q 
Sbjct: 341 LTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQA 400

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
             +  D+  + S++ ACS L  +   +  HG +I +GL+ +  I N+++D+Y KCG ID 
Sbjct: 401 CNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDL 460

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           SR VF+ + ++D+VSW +MI+ Y  +GL  EA  LF  M     E D +T +  ++A S 
Sbjct: 461 SRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSH 520

Query: 475 LSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWT 532
             ++ +GK     +  K G          +VD+ AR G LD A +    +  K D+ +W 
Sbjct: 521 SGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWG 580

Query: 533 SMINANGLH 541
           +++ A  +H
Sbjct: 581 ALLGACRIH 589



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 224/447 (50%), Gaps = 15/447 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           +Y +C     A  +F K+  R V  WNAML  Y ++G     +     M+   G+  +A 
Sbjct: 143 LYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNAS 202

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD---FIVNSLVAMYAKCYDFRKARQLF 116
           T   ++   A    L  G  +H   L+   D  +    I  +L+ MYAKC     A ++F
Sbjct: 203 TLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVF 262

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVA-ALQACEDSSF 175
             M  + +V  W+++I  +    +  EA  LF++M   G+   + T VA AL+ C   + 
Sbjct: 263 HGMTVRNEVT-WSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLAD 321

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             +G ++HA   KSG +  +   N+L++MYA+ G + EA  +  ++  KD++S+ ++L+G
Sbjct: 322 LRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSG 381

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +VQN    +A   F+++Q    +PD    V+ + A   L  L +G+  H   I +G   +
Sbjct: 382 YVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALE 441

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             I N+L+DMYAKC  ++   +VF +M A+D +SW T+IAGY  +    +A  LF +++ 
Sbjct: 442 TSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKN 501

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKE-----IHGYIIRKGLSDLVILNAIVDVYGKCG 410
           +G + D +    ++ ACS    +++ K       H Y I   +   + +   VD+  + G
Sbjct: 502 QGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICM---VDLLARGG 558

Query: 411 NIDYSRNVFESIESK-DVVSWTSMISS 436
            +D +    +S+  K DV  W +++ +
Sbjct: 559 FLDEAYQFIQSMPLKADVRVWGALLGA 585



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 130/280 (46%), Gaps = 9/280 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + +A  LFD+++ +   ++ A+L  YV NG+       + +M+   +  D  T
Sbjct: 350 MYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIAT 409

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I AC+ L  L  G   HG V+  G      I NSL+ MYAKC     +RQ+FD+M 
Sbjct: 410 MVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMP 469

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+V WN++I+ Y   G   EA  LF  M+  G   +  TF+  + AC  S   T G 
Sbjct: 470 AR-DIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGK 528

Query: 181 E-IHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTGF 236
                 T K G    ++ Y+   ++ + AR G + EA   +  +  K  V  W ++L   
Sbjct: 529 HWFDTMTHKYGILPRMEHYI--CMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGAC 586

Query: 237 VQNDLYCKAMQFFRELQGAGQK--PDQVCTVNAVSASGRL 274
             +       Q  R +Q  G +   + V   N  SA+GR 
Sbjct: 587 RIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRF 626



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 6/234 (2%)

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G +  +R VF+ I + D  ++ ++I +Y   G  + A++L+  M    V  +  T    L
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
            A S+L+ L  G+ ++      G + +  V+++L+D+Y RC     A  VF  +  +D++
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACSHSGLINEGKKFLEI 588
            W +M+     HG    AI     M+      P+  T ++LL   +  G + +G      
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226

Query: 589 MRCDYQLDPWPEHY---ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
               Y LD   E       L+D+  +  HL  A +    M +      W AL+G
Sbjct: 227 CLRAY-LDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVR-NEVTWSALIG 278


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 271/732 (37%), Positives = 448/732 (61%), Gaps = 6/732 (0%)

Query: 108 DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
           + + AR +FD++  K  VVLWN +I  Y+ SG   +++ L+  M ++G+    +TF   L
Sbjct: 56  EIQLARHVFDQI-PKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLL 114

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL--ENKD 225
           +AC       LG  IH      G ++ +YV+ AL+ MYA+CG + +A  +   +  +++D
Sbjct: 115 KACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRD 174

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
            V+WN+M+  F  + L+ + +    ++Q AG  P+    V+ +   G+   L  GK +HA
Sbjct: 175 IVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHA 234

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
           Y I+  F  ++ +   L+DMYAKC  + Y  ++F  +  ++ + W+ +I GY  ++    
Sbjct: 235 YYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISD 294

Query: 346 ALELFRTVQ-LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIV 403
           AL L+  +  + GL+     + ++L AC+ L  + + K++H ++I+ G+  D  + N+++
Sbjct: 295 ALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLI 354

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
            +Y KCG +D +    + + +KD VS++++IS  V NG A +AL +F  M  + +     
Sbjct: 355 SMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLE 414

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T+++ L A S L+ L+ G   +G+ + +GF  + S+ ++++DMY++CG + I+ ++F+ +
Sbjct: 415 TMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRM 474

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           Q +D+I W +MI   G+HG    A+ LF +++A    PD +T +A+L ACSHSGL+ EGK
Sbjct: 475 QNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGK 534

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRV 643
            +   M  ++ + P   HY C+VDLL RA +L+EAY F++ M   P   +W ALL ACR 
Sbjct: 535 YWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRT 594

Query: 644 HSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
           H N E+GE V+KK+  L P   GN+VL+SN++++  +W D   +R   R  G KK+PG S
Sbjct: 595 HKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCS 654

Query: 704 WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
           W+EI   IH FI   +SH +S  I KKL E+  ++++  GY A + FVLH+VEEEEK Q+
Sbjct: 655 WVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKL-GYRADSSFVLHDVEEEEKEQI 713

Query: 764 LYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHH 823
           L  HSE++AIA+G+L ++  S I +TKNLR+CVDCHS  K ++ L  RE+ VRDA+RFHH
Sbjct: 714 LLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHH 773

Query: 824 FEAGVCSCGDYW 835
           F+ G+C+C D+W
Sbjct: 774 FKDGICNCQDFW 785



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 162/511 (31%), Positives = 275/511 (53%), Gaps = 6/511 (1%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +FD++ + +V  WN M+  Y  +G   + +  Y  M  LG++   FTFP ++KAC+ 
Sbjct: 60  ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-DVVLWN 129
           L+ L  G  IH      G     ++  +L+ MYAKC    +A+ LF+ +  ++ D+V WN
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           ++I+A+S      + +    +MQ+ G+  N+ T V+ L     ++    G  IHA  +++
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN 239

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
                V +  AL+ MYA+C  +  A  +   +  K+ V W++M+ G+V +D    A+  +
Sbjct: 240 FFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALY 299

Query: 250 RELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
            ++    G  P        + A  +L +L  GK+LH + IK G   D  +GN+L+ MYAK
Sbjct: 300 DDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAK 359

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  ++       +M A+D +S++ II+G  QN    KAL +FR +Q  G+   +  + ++
Sbjct: 360 CGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIAL 419

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           L ACS L  +      HGY + +G + D  I NAI+D+Y KCG I  SR +F+ ++++D+
Sbjct: 420 LPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDI 479

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           +SW +MI  Y  +GL  EAL LF  +    ++ D +TL++ LSA S   ++ +GK     
Sbjct: 480 ISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSS 539

Query: 488 IIRKGFNLEGSVAS--SLVDMYARCGALDIA 516
            + + FN++  +A    +VD+ AR G LD A
Sbjct: 540 -MSQNFNIKPRMAHYICMVDLLARAGNLDEA 569



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 233/445 (52%), Gaps = 13/445 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQ--RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY KCG +  A+ LF+ +S   R +  WNAM+ A+  +    + + + ++M+  G++ ++
Sbjct: 151 MYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNS 210

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            T   ++        L  G  IH   ++  +     +  +L+ MYAKC+    AR++F+ 
Sbjct: 211 STLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNT 270

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFET 177
           + +K DV  W+++I  Y       +AL L+ +M  + GL     T    L+AC   +   
Sbjct: 271 VNKKNDVC-WSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLK 329

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G ++H   +KSG +L   V N+LI+MYA+CG M  A G L ++  KD+VS++++++G V
Sbjct: 330 RGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCV 389

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN    KA+  FR++Q +G  P     +  + A   L  L +G   H Y + +GF +D  
Sbjct: 390 QNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTS 449

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           I N ++DMY+KC  +     +F +M  +D ISW T+I GY  +   ++AL LF+ +Q  G
Sbjct: 450 ICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALG 509

Query: 358 LDADVMIIGSVLMACSGLKCMSQTK-----EIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
           L  D + + +VL ACS    +++ K         + I+  ++  +    +VD+  + GN+
Sbjct: 510 LKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYI---CMVDLLARAGNL 566

Query: 413 DYSRNVFESIE-SKDVVSWTSMISS 436
           D +    + +    +V  W +++++
Sbjct: 567 DEAYTFIQRMPFVPNVRIWGALLAA 591


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 296/792 (37%), Positives = 457/792 (57%), Gaps = 58/792 (7%)

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLW-NSIISAYSASGQCLEALGLFREMQRVGLV 157
           +++MY       KA  +  R+      V W N +I      G   + L L+R MQR+G  
Sbjct: 83  IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 142

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            + YTF   L+AC +      G  +HA    SG    V+V N L++MY RCG    A  V
Sbjct: 143 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 202

Query: 218 LYQLENK---DSVSWNSMLTGFVQNDLYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGR 273
             ++  +   D VSWNS++  ++Q     +AM+ F R  +  G +PD V  VN + A   
Sbjct: 203 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 262

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW--- 330
           +G    GK++H YA++ G   D+ +GN ++DMYAKC  +    +VF +M  +D +SW   
Sbjct: 263 VGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAM 322

Query: 331 --------------------------------TTIIAGYAQNNCHLKALELFRTVQLEGL 358
                                           + +IAGYAQ     +AL++FR + L G 
Sbjct: 323 VTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGS 382

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS--------DLVILNAIVDVYGKCG 410
           + +V+ + S+L  C+    +   KE H + I+  L+        DL+++NA++D+Y KC 
Sbjct: 383 EPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCK 442

Query: 411 NIDYSRNVFESIESKD--VVSWTSMISSYVHNGLANEALELFYLMNEAN--VESDSITLV 466
           +   +R +F+ I  KD  VV+WT +I     +G ANEALELF  M + +  V  ++ T+ 
Sbjct: 443 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 502

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGS---VASSLVDMYARCGALDIANKVFNCV 523
            AL A + L  L+ G++++ +++R  F  E +   VA+ L+DMY++ G +D A  VF+ +
Sbjct: 503 CALMACARLGALRFGRQIHAYVLRNRF--ESAMLFVANCLIDMYSKSGDVDAARVVFDNM 560

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
             ++ + WTS++   G+HGRG+ A+ +FY+M+     PD +TF+ +LYACSHSG++++G 
Sbjct: 561 HQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGI 620

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRV 643
            +   M  D+ + P  EHYAC+VDLL RA  L+EA + +R M ++PT  VW ALL ACRV
Sbjct: 621 NYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRV 680

Query: 644 HSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
           ++N ELGE  A +LLEL+ GN G+Y L+SN++A +R WKDV ++R  M+ +G+KK PG S
Sbjct: 681 YANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCS 740

Query: 704 WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
           W++      +F A D SH  S +IY  L ++ +++ +  GYV   +F LH+V++EEK  +
Sbjct: 741 WVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRI-KALGYVPDNRFALHDVDDEEKGDL 799

Query: 764 LYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHH 823
           L  HSE+LA+AYG+L +  G+ IRITKNLR C DCHS    +S +   E++VRD++RFHH
Sbjct: 800 LSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHH 859

Query: 824 FEAGVCSCGDYW 835
           F+ G CSC  YW
Sbjct: 860 FKNGSCSCRGYW 871



 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 186/574 (32%), Positives = 293/574 (51%), Gaps = 57/574 (9%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
           S  TVF WN ++   V  G    VL+ Y RM+ LG   D +TFP V+KAC  +    CGA
Sbjct: 106 SSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGA 165

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE--DVVLWNSIISAYS 136
            +H +V   G++   F+ N LV+MY +C  +  ARQ+FD M E+   D+V WNSI++AY 
Sbjct: 166 SVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYM 225

Query: 137 ASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
             G  + A+ +F  M + +G+  +A + V  L AC      + G ++H   ++SG    V
Sbjct: 226 QGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 285

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF------------------- 236
           +V NA++ MYA+CG M EA  V  +++ KD VSWN+M+TG+                   
Sbjct: 286 FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 345

Query: 237 ----------------VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
                            Q  L  +A+  FR++   G +P+ V  V+ +S     G LL+G
Sbjct: 346 KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHG 405

Query: 281 KELHAYAIK-------QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD--FISWT 331
           KE H +AIK            DL + N L+DMY+KC        +F  +  +D   ++WT
Sbjct: 406 KETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWT 465

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVM----IIGSVLMACSGLKCMSQTKEIHGY 387
            +I G AQ+    +ALELF   Q+   D  VM     I   LMAC+ L  +   ++IH Y
Sbjct: 466 VLIGGNAQHGEANEALELFS--QMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAY 523

Query: 388 IIRKGLSD--LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           ++R       L + N ++D+Y K G++D +R VF+++  ++ VSWTS+++ Y  +G   E
Sbjct: 524 VLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEE 583

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLV 504
           AL++FY M +  +  D +T V  L A S   ++ +G    NG     G        + +V
Sbjct: 584 ALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMV 643

Query: 505 DMYARCGALDIANKVFNCVQTKDL-ILWTSMINA 537
           D+ +R G LD A ++   +  K    +W ++++A
Sbjct: 644 DLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 677



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 250/525 (47%), Gaps = 92/525 (17%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTV---FTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISV 56
           MYG+CG+  +A Q+FD++ +R V    +WN+++ AY+  G+ +R ++ + RM   LGI  
Sbjct: 189 MYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRP 248

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           DA +   V+ ACA +     G ++HG  L+ G     F+ N++V MYAKC    +A ++F
Sbjct: 249 DAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVF 308

Query: 117 DRMGEKE----------------------------------DVVLWNSIISAYSASGQCL 142
           +RM  K+                                  +VV W+++I+ Y+  G   
Sbjct: 309 ERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGF 368

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL-------QV 195
           EAL +FR+M   G   N  T V+ L  C  +     G E H   +K   NL        +
Sbjct: 369 EALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDL 428

Query: 196 YVANALIAMYARCGKMTEAAGVLYQL---ENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
            V NALI MY++C K  +AA  ++ L   +++  V+W  ++ G  Q+    +A++ F ++
Sbjct: 429 MVINALIDMYSKC-KSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 487

Query: 253 QGAGQKPDQVCTVNAVSAS------GRLGNLLNGKELHAYAIKQGFVSD-LQIGNTLMDM 305
                +PD     NA + S       RLG L  G+++HAY ++  F S  L + N L+DM
Sbjct: 488 ----LQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDM 543

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
           Y+K   V+    VF  M  ++ +SWT+++ GY  +    +AL++F  +Q   L  D +  
Sbjct: 544 YSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTF 603

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------------IVDVYGKCGNI 412
             VL ACS           H  ++ +G++    +N              +VD+  + G +
Sbjct: 604 VVVLYACS-----------HSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 652

Query: 413 DYSRNVFESIESKDVVS-WTSMISS---YVHNGL----ANEALEL 449
           D +  +   +  K   + W +++S+   Y +  L    AN+ LEL
Sbjct: 653 DEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLEL 697


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 296/792 (37%), Positives = 458/792 (57%), Gaps = 58/792 (7%)

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLW-NSIISAYSASGQCLEALGLFREMQRVGLV 157
           +++MY       KA  +  R+      V W N +I      G   + L L+R MQR+G  
Sbjct: 64  IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 123

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            + YTF   L+AC +      G  +HA    SG    V+V N L++MY RCG    A  V
Sbjct: 124 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 183

Query: 218 LYQLENK---DSVSWNSMLTGFVQNDLYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGR 273
             ++  +   D VSWNS++  ++Q     +AM+ F R  +  G +PD V  VN + A   
Sbjct: 184 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 243

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW--- 330
           +G    GK++H YA++ G   D+ +GN ++DMYAKC  +    +VF +M  +D +SW   
Sbjct: 244 VGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAM 303

Query: 331 --------------------------------TTIIAGYAQNNCHLKALELFRTVQLEGL 358
                                           + +IAGYAQ     +AL++FR ++L G 
Sbjct: 304 VTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGS 363

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS--------DLVILNAIVDVYGKCG 410
           + +V+ + S+L  C+    +   KE H + I+  L+        DL+++NA++D+Y KC 
Sbjct: 364 EPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCK 423

Query: 411 NIDYSRNVFESIESKD--VVSWTSMISSYVHNGLANEALELFYLMNEAN--VESDSITLV 466
           +   +R +F+ I  KD  VV+WT +I     +G ANEALELF  M + +  V  ++ T+ 
Sbjct: 424 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 483

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGS---VASSLVDMYARCGALDIANKVFNCV 523
            AL A + L  L+ G++++ +++R  F  E +   VA+ L+DMY++ G +D A  VF+ +
Sbjct: 484 CALMACARLGALRFGRQIHAYVLRNRF--ESAMLFVANCLIDMYSKSGDVDAARVVFDNM 541

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
             ++ + WTS++   G+HGRG+ A+ +FY+M+     PD +TF+ +LYACSHSG++++G 
Sbjct: 542 HQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGI 601

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRV 643
            +   M  D+ + P  EHYAC+VDLL RA  L+EA + +R M ++PT  VW ALL ACRV
Sbjct: 602 NYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRV 661

Query: 644 HSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
           ++N ELGE  A +LLEL+ GN G+Y L+SN++A +R WKDV ++R  M+ +G+KK PG S
Sbjct: 662 YANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCS 721

Query: 704 WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
           W++      +F A D SH  S +IY  L ++ +++ +  GYV   +F LH+V++EEK  +
Sbjct: 722 WVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRI-KALGYVPDNRFALHDVDDEEKGDL 780

Query: 764 LYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHH 823
           L  HSE+LA+AYG+L +  G+ IRITKNLR C DCHS    +S +   E++VRD++RFHH
Sbjct: 781 LSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHH 840

Query: 824 FEAGVCSCGDYW 835
           F+ G CSC  YW
Sbjct: 841 FKNGSCSCRGYW 852



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 186/574 (32%), Positives = 294/574 (51%), Gaps = 57/574 (9%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
           S  TVF WN ++   V  G    VL+ Y RM+ LG   D +TFP V+KAC  +    CGA
Sbjct: 87  SSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGA 146

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE--DVVLWNSIISAYS 136
            +H +V   G++   F+ N LV+MY +C  +  ARQ+FD M E+   D+V WNSI++AY 
Sbjct: 147 SVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYM 206

Query: 137 ASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
             G  + A+ +F  M + +G+  +A + V  L AC      + G ++H   ++SG    V
Sbjct: 207 QGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 266

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF------------------- 236
           +V NA++ MYA+CG M EA  V  +++ KD VSWN+M+TG+                   
Sbjct: 267 FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 326

Query: 237 ----------------VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
                            Q  L  +A+  FR+++  G +P+ V  V+ +S     G LL+G
Sbjct: 327 KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHG 386

Query: 281 KELHAYAIK-------QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD--FISWT 331
           KE H +AIK            DL + N L+DMY+KC        +F  +  +D   ++WT
Sbjct: 387 KETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWT 446

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVM----IIGSVLMACSGLKCMSQTKEIHGY 387
            +I G AQ+    +ALELF   Q+   D  VM     I   LMAC+ L  +   ++IH Y
Sbjct: 447 VLIGGNAQHGEANEALELFS--QMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAY 504

Query: 388 IIRKGLSD--LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           ++R       L + N ++D+Y K G++D +R VF+++  ++ VSWTS+++ Y  +G   E
Sbjct: 505 VLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEE 564

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLV 504
           AL++FY M +  +  D +T V  L A S   ++ +G    NG     G        + +V
Sbjct: 565 ALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMV 624

Query: 505 DMYARCGALDIANKVFNCVQTKDL-ILWTSMINA 537
           D+ +R G LD A ++   +  K    +W ++++A
Sbjct: 625 DLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 658



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 252/525 (48%), Gaps = 92/525 (17%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTV---FTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISV 56
           MYG+CG+  +A Q+FD++ +R V    +WN+++ AY+  G+ +R ++ + RM   LGI  
Sbjct: 170 MYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRP 229

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           DA +   V+ ACA +     G ++HG  L+ G     F+ N++V MYAKC    +A ++F
Sbjct: 230 DAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVF 289

Query: 117 DRMGEKE----------------------------------DVVLWNSIISAYSASGQCL 142
           +RM  K+                                  +VV W+++I+ Y+  G   
Sbjct: 290 ERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGF 349

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL-------QV 195
           EAL +FR+M+  G   N  T V+ L  C  +     G E H   +K   NL        +
Sbjct: 350 EALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDL 409

Query: 196 YVANALIAMYARCGKMTEAAGVLYQL---ENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
            V NALI MY++C K  +AA  ++ L   +++  V+W  ++ G  Q+    +A++ F ++
Sbjct: 410 MVINALIDMYSKC-KSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 468

Query: 253 QGAGQKPDQVCTVNAVSAS------GRLGNLLNGKELHAYAIKQGFVSD-LQIGNTLMDM 305
                +PD     NA + S       RLG L  G+++HAY ++  F S  L + N L+DM
Sbjct: 469 ----LQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDM 524

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
           Y+K   V+    VF  M  ++ +SWT+++ GY  +    +AL++F  +Q  GL  D +  
Sbjct: 525 YSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTF 584

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------------IVDVYGKCGNI 412
             VL ACS           H  ++ +G++    +N              +VD+  + G +
Sbjct: 585 VVVLYACS-----------HSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 633

Query: 413 DYSRNVFESIESKDVVS-WTSMISS---YVHNGL----ANEALEL 449
           D +  +   +  K   + W +++S+   Y +  L    AN+ LEL
Sbjct: 634 DEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLEL 678


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 290/741 (39%), Positives = 443/741 (59%), Gaps = 18/741 (2%)

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA--LGLFREMQRVGLVTNAYTFVAALQ 168
           +A  LFD++    DV  +N +I AYS+S     A  L L+R M R  +  N YTF  AL+
Sbjct: 75  RAHHLFDQI-PSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALK 133

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           AC   +    G  IH   + +G    ++V+ AL+ MY +C  + +AA +   +  +D V+
Sbjct: 134 ACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVA 193

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQK--PDQVCTVNAVSASGRLGNLLNGKELHAY 286
           WN+ML G+  + +Y  A+     +Q    +  P+    V  +    + G L  G  +HAY
Sbjct: 194 WNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAY 253

Query: 287 AI----------KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
            I          K      + +G  L+DMYAKC  + Y  RVF  M A++ ++W+ +I G
Sbjct: 254 CIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGG 313

Query: 337 YAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-S 394
           +   +   +A  LF+ +  +GL       I S L AC+ L  +   +++H  + + G+ +
Sbjct: 314 FVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHA 373

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           DL   N+++ +Y K G ID +  +F+ +  KD VS+++++S YV NG A EA  +F  M 
Sbjct: 374 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 433

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
             NVE D+ T+VS + A S L+ L+ G+  +G +I +G   E S+ ++L+DMYA+CG +D
Sbjct: 434 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID 493

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           ++ +VFN + ++D++ W +MI   G+HG GK A  LF +M    F PD +TF+ LL ACS
Sbjct: 494 LSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 553

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           HSGL+ EGK +  +M   Y L P  EHY C+VDLL R   L+EAY+F++SM +     VW
Sbjct: 554 HSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVW 613

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALLGACRV+ N +LG+ V++ + EL P   GN+VL+SN+++A+ ++ +  +VR+  +  
Sbjct: 614 VALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQ 673

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           G KK+PG SWIEI   +H+F+  D+SH +S EIY++L  I   +++  GY   T FVL +
Sbjct: 674 GFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKL-GYQPDTSFVLQD 732

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           +EEEEK + L  HSE+LAIAYG+L  +E   I +TKNLRVC DCH+  K +S +  R ++
Sbjct: 733 LEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAII 792

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           VRDANRFHHF+ G CSCGD+W
Sbjct: 793 VRDANRFHHFKNGQCSCGDFW 813



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 170/553 (30%), Positives = 278/553 (50%), Gaps = 25/553 (4%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRV--LETYSRMRVLGISVDAFTFPC 63
           G +  A  LFD++    V T+N ++ AY S+        L  Y RM    ++ + +TFP 
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
            +KAC+ L D  CG  IH   +  G  +  F+  +L+ MY KC     A  +F  M  + 
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR- 189

Query: 124 DVVLWNSIISAYSASGQCLEALG--LFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           D+V WN++++ Y+  G    A+   L  +MQ   L  NA T VA L           G  
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 182 IHAATV----------KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           +HA  +          KS     V +  AL+ MYA+CG +  A  V   +  ++ V+W++
Sbjct: 250 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 309

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAG---QKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           ++ GFV      +A   F+ +   G     P  + +  A+ A   L +L  G++LHA   
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS--ALRACASLDHLRMGEQLHALLA 367

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K G  +DL  GN+L+ MYAK   ++    +F +M  +D +S++ +++GY QN    +A  
Sbjct: 368 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 427

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYG 407
           +F+ +Q   ++ D   + S++ ACS L  +   +  HG +I +GL S+  I NA++D+Y 
Sbjct: 428 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYA 487

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KCG ID SR VF  + S+D+VSW +MI+ Y  +GL  EA  LF  MN      D +T + 
Sbjct: 488 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 547

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS--SLVDMYARCGALDIANKVFNCVQT 525
            LSA S   ++ +GK     ++  G+ L   +     +VD+ +R G LD A +    +  
Sbjct: 548 LLSACSHSGLVIEGKHWF-HVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPL 606

Query: 526 K-DLILWTSMINA 537
           + D+ +W +++ A
Sbjct: 607 RADVRVWVALLGA 619



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 226/455 (49%), Gaps = 23/455 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY--SRMRVLGISVDA 58
           MY KC  + DA  +F  +  R +  WNAML  Y  +G     +      +M++  +  +A
Sbjct: 169 MYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNA 228

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLK-CGYDS-------TDFIV--NSLVAMYAKCYD 108
            T   ++   A    L  G  +H   ++ C + +       TD ++   +L+ MYAKC  
Sbjct: 229 STLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGS 288

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVA-AL 167
              AR++FD M  + +V  W+++I  +    +  +A  LF+ M   GL   + T +A AL
Sbjct: 289 LLYARRVFDAMPARNEVT-WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASAL 347

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           +AC       +G ++HA   KSG +  +   N+L++MYA+ G + +A  +  ++  KD+V
Sbjct: 348 RACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 407

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           S++++++G+VQN    +A   F+++Q    +PD    V+ + A   L  L +G+  H   
Sbjct: 408 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 467

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           I +G  S+  I N L+DMYAKC  ++   +VF  M ++D +SW T+IAGY  +    +A 
Sbjct: 468 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 527

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAI 402
            LF  +   G   D +    +L ACS    + + K       HGY +   +   + +   
Sbjct: 528 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICM--- 584

Query: 403 VDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           VD+  + G +D +    +S+  + DV  W +++ +
Sbjct: 585 VDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 7/279 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  A  LFD+++ +   +++A++  YV NG        + +M+   +  DA T
Sbjct: 384 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 443

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I AC+ L  L  G   HG V+  G  S   I N+L+ MYAKC     +RQ+F+ M 
Sbjct: 444 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 503

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+V WN++I+ Y   G   EA  LF EM  +G   +  TF+  L AC  S     G 
Sbjct: 504 SR-DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 562

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG--- 235
              H      G   ++     ++ + +R G + EA   +  +  +  V  W ++L     
Sbjct: 563 HWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 622

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
           +   DL  K  +  +EL   G   + V   N  SA+GR 
Sbjct: 623 YKNIDLGKKVSRMIQELGPEGTG-NFVLLSNIYSAAGRF 660


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 304/830 (36%), Positives = 470/830 (56%), Gaps = 11/830 (1%)

Query: 11  AEQLFDKVSQR-TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           A    D++ +R      N +L  Y   G  L VL+ +S  R  G+ VD+ T  CV+KAC 
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW 128
            + D   G ++H L +KCG+D  +     SLV MY KC    +  ++F+ M  K++VV W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGM-PKKNVVTW 169

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
            S+++  + +    E + LF  M+  G+  N +TF + L A        LG  +HA +VK
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            G    V+V N+L+ MYA+CG + +A  V   +E +D VSWN+++ G   N+   +A+Q 
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           F E +    K  Q      +     L  L   ++LH+  +K GF     +   L D Y+K
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349

Query: 309 CCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
           C  +     +F   T +++ +SWT II+G  QN     A+ LF  ++ + +  +     +
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L A   +       +IH  +I+     +  +  A++  Y K G+ + + ++F+ IE KD
Sbjct: 410 MLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKD 465

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI-LKKGKELN 485
           VV+W++M+S +   G    A  LF  M    ++ +  T+ S + A +  S  + +G++ +
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
              I+  ++    V+S+LV MY+R G +D A  VF     +DL+ W SMI+    HG   
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSM 585

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            AI+ F +MEA     D +TFLA++  C+H+GL+ EG+++ + M  D++++P  EHYAC+
Sbjct: 586 KAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACM 645

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           VDL  RA  L+E    +R M     A VW  LLGACRVH N ELG+  A KLL L+P + 
Sbjct: 646 VDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDS 705

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
             YVL+SN++AA+ KWK+ ++VR  M    +KK  G SWI+I NK+HSFIA DKSH  SD
Sbjct: 706 STYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSD 765

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
           +IYKKL  I  +L+++ GY   T FVLH++ E++K  ML  HSERLA+A+G++ +  G+ 
Sbjct: 766 QIYKKLKVIITRLKQD-GYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTP 824

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++I KNLRVC DCH   K+VS +  RE+++RD +RFHHF  G CSCGD+W
Sbjct: 825 LQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 159/602 (26%), Positives = 296/602 (49%), Gaps = 19/602 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV +  ++F+ + ++ V TW ++L           V+  + RMR  GI  + FT
Sbjct: 144 MYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFT 203

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ A A    LD G ++H   +K G  S+ F+ NSL+ MYAKC     A+ +F+ M 
Sbjct: 204 FASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM- 262

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  D+V WN++++    +   LEAL LF E +         T+   ++ C +     L  
Sbjct: 263 ETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALAR 322

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQN 239
           ++H+  +K G +L   V  AL   Y++CG++ +A  +      +++ VSW ++++G +QN
Sbjct: 323 QLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQN 382

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A+  F  ++     P++      + AS  L  L    ++HA  IK  +     +G
Sbjct: 383 GDIPLAVVLFSRMREDRVMPNEFTYSAMLKAS--LSIL--PPQIHAQVIKTNYQHIPFVG 438

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+  Y+K         +F  +  +D ++W+ +++ +AQ      A  LF  + ++G+ 
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498

Query: 360 ADVMIIGSVLMACSGLKC-MSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRN 417
            +   I SV+ AC+     + Q ++ H   I+    D + + +A+V +Y + GNID ++ 
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VFE    +D+VSW SMIS Y  +G + +A+E F  M  + ++ D +T ++ +   +   +
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGL 618

Query: 478 LKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALD-IANKVFNCVQTKDLILWTSMI 535
           + +G++    ++R    N      + +VD+Y+R G LD   + + +       ++W +++
Sbjct: 619 VVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
            A  +H     GK + D    +E      D  T++ L    + +G   E  +  ++M  D
Sbjct: 679 GACRVHKNVELGKFSADKLLSLEPH----DSSTYVLLSNIYAAAGKWKERDEVRKLM--D 732

Query: 593 YQ 594
           Y+
Sbjct: 733 YR 734


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 289/812 (35%), Positives = 475/812 (58%), Gaps = 8/812 (0%)

Query: 27  NAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLK 86
           N+++      G+  + L     M+ L +SV+  T+  +++ C   +    G+++H  V K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 87  CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALG 146
                   + N+L++M+ +  D  +A  +F +M E+ D+  WN ++  Y+ +G   EAL 
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAER-DLFSWNVLVGGYAKAGYFDEALN 181

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           L+  M  VG+  + YTF   L+ C        G E+H   ++ G    V V NALI MY 
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +CG +  A  V  ++  +D +SWN+M++G+ +ND+  + ++ F  ++     PD +   +
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTS 301

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            +SA   LG+   G+E+H Y IK GFV+++ + N+L+ M++   C +    VF +M  +D
Sbjct: 302 VISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKD 361

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SWT +I+GY +N    KA+E +  ++ EG+  D + I SVL AC+GL  + +   +H 
Sbjct: 362 LVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHE 421

Query: 387 YIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           +  R GL+  VI+ N+++D+Y KC  ID +  VF  I +K+V+SWTS+I     N  + E
Sbjct: 422 FADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFE 481

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL  F  M   +++ +S+TLVS LSA + +  L  GKE++   +R G   +G + ++L+D
Sbjct: 482 ALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLD 540

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY RCG ++ A   FN  + KD+  W  ++      G+G +A++LF+KM      PD IT
Sbjct: 541 MYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEIT 599

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F +LL ACS SG++ +G ++ E M   + + P  +HYA +VDLLGRA  LE+AY+F++ M
Sbjct: 600 FTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKM 659

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
            I+P   +W ALL ACR++ N ELGE+ A+ + E+D  + G Y+L+ N++A S KW +V 
Sbjct: 660 PIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVA 719

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
           +VR  MR + L   PG SW+E+  ++H+F+  D  H +  EI   L    EK+E  G  +
Sbjct: 720 RVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATG--L 777

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
           + ++    +  +  K ++  GHSERLAIA+G++ +  G+ I +TKNL +C +CH+  K +
Sbjct: 778 SMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFI 837

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGD--YW 835
           S++  R + VRD  +FHHF+ GVCSCGD  YW
Sbjct: 838 SKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869



 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 204/597 (34%), Positives = 334/597 (55%), Gaps = 15/597 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ + G +++A  +F K+++R +F+WN ++G Y   G     L  Y RM  +GI  D +T
Sbjct: 138 MFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYT 197

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV++ C  L DL  G ++H  V++ G++S   +VN+L+ MY KC D   AR +FDRM 
Sbjct: 198 FPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRM- 256

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D + WN++IS Y  +  CLE L LF  M+   +  +  T  + + ACE    E LG 
Sbjct: 257 PRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR 316

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   +K+G   +V V N+LI M++  G   EA  V  ++E KD VSW +M++G+ +N 
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG 376

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  KA++ +  ++  G  PD++   + +SA   LG L  G  LH +A + G  S + + N
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVAN 436

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMY+KC C++    VF+++  ++ ISWT+II G   N    +AL  F+ + L  L  
Sbjct: 437 SLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SLKP 495

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           + + + SVL AC+ +  +S  KEIH + +R GL  D  + NA++D+Y +CG ++ + N F
Sbjct: 496 NSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF 555

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            S E KDV SW  +++ Y   G    A+ELF+ M E++V  D IT  S L A S   ++ 
Sbjct: 556 NSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVT 614

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMIN 536
            G E    +  K F++  ++   +S+VD+  R G L+ A +    +    D  +W +++N
Sbjct: 615 DGLEYFESMEHK-FHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           A  ++     G++A    ++M+ +S    +   L  LYA   SG  +E  +  +IMR
Sbjct: 674 ACRIYQNVELGELAAQHIFEMDTKSVG--YYILLCNLYA--DSGKWDEVARVRKIMR 726


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 290/745 (38%), Positives = 450/745 (60%), Gaps = 13/745 (1%)

Query: 95  IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFRE-MQR 153
           I   LV +Y    +   AR  FD + +  DV  WN +IS Y  +G   E +  F   M  
Sbjct: 88  ISAKLVNLYCYLGNVALARHTFDHI-QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLS 146

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            GL  +  TF + L+AC        G +IH   +K G    VYVA +LI +Y+R   +  
Sbjct: 147 SGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGN 203

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +  ++  +D  SWN+M++G+ Q+    +A+     L+      D V  V+ +SA   
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTE 259

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
            G+   G  +H+Y+IK G  S+L + N L+D+YA+   +    +VF +M  +D ISW +I
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG- 392
           I  Y  N   L+A+ LF+ ++L  +  D + + S+    S L  +   + + G+ +RKG 
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379

Query: 393 -LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
            L D+ I NA+V +Y K G +D +R VF  + + DV+SW ++IS Y  NG A+EA+E++ 
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439

Query: 452 LMNE-ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
           +M E   + ++  T VS L A S    L++G +L+G +++ G  L+  V +SL DMY +C
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G L+ A  +F  +   + + W ++I  +G HG G+ A+ LF +M  E   PDHITF+ LL
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            ACSHSGL++EG+   E+M+ DY + P  +HY C+VD+ GRA  LE A +F++SM ++P 
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619

Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
           A +W ALL ACRVH N +LG+I ++ L E++P + G +VL+SN++A++ KW+ V+++R  
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
             G GL+KTPG S +E+ NK+  F   +++H   +E+Y++L  +  KL +  GYV   +F
Sbjct: 680 AHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL-KMIGYVPDHRF 738

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
           VL +VE++EK  +L  HSERLAIA+ ++ +   + IRI KNLRVC DCHS  K +S++  
Sbjct: 739 VLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITE 798

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           RE++VRD+NRFHHF+ GVCSCGDYW
Sbjct: 799 REIIVRDSNRFHHFKNGVCSCGDYW 823



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 178/580 (30%), Positives = 318/580 (54%), Gaps = 24/580 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAF 59
           +Y   G+V  A   FD +  R V+ WN M+  Y   G    V+  +S  M   G++ D  
Sbjct: 95  LYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYR 154

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP V+KAC  + D   G KIH L LK G+    ++  SL+ +Y++      AR LFD M
Sbjct: 155 TFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + D+  WN++IS Y  SG   EAL L   ++ +    ++ T V+ L AC ++     G
Sbjct: 212 PVR-DMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRG 266

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           + IH+ ++K G   +++V+N LI +YA  G++ +   V  ++  +D +SWNS++  +  N
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG-FVSDLQI 298
           +   +A+  F+E++ +  +PD +  ++  S   +LG++   + +  + +++G F+ D+ I
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 386

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG- 357
           GN ++ MYAK   V+    VF  +   D ISW TII+GYAQN    +A+E++  ++ EG 
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 446

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           + A+     SVL ACS    + Q  ++HG +++ GL  D+ ++ ++ D+YGKCG ++ + 
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL 506

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           ++F  I   + V W ++I+ +  +G   +A+ LF  M +  V+ D IT V+ LSA S   
Sbjct: 507 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
           ++ +G+     +++  + +  S+     +VDMY R G L+ A K    +  + D  +W +
Sbjct: 567 LVDEGQWCFE-MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGA 625

Query: 534 MINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALL 570
           +++A  +HG    GK+A +  +++E     P+H+ +  LL
Sbjct: 626 LLSACRVHGNVDLGKIASEHLFEVE-----PEHVGYHVLL 660


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 301/811 (37%), Positives = 454/811 (55%), Gaps = 67/811 (8%)

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
           Y S   +   +VA Y  C     A  + +R+      V WN ++ A+   G+   A+G+ 
Sbjct: 79  YVSPKSLGTGVVASYLACGATSDALSVLERV-VPSPAVWWNLLVRAHIEEGRLDRAIGVS 137

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
             M R G   + +T   AL+AC +      G   H     +G    V+V NAL+AMY+R 
Sbjct: 138 CRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRS 197

Query: 209 GKMTEAAGVLYQLENK---DSVSWNSMLTGFVQNDLYCKAMQFFREL------QGAGQKP 259
           G + +A+ V  ++  K   D +SWNS++   V+      A+  F E+      +   ++ 
Sbjct: 198 GSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERS 257

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D +  VN + A   L  L   KE+H+YAI+ G  +D  + N L+D YAKC  +     VF
Sbjct: 258 DIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVF 317

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI--------------- 364
             M  +D +SW  ++ GY Q+     A ELF+ ++ E +  DV+                
Sbjct: 318 NVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQ 377

Query: 365 --------------------IGSVLMACSGLKCMSQTKEIHGYIIRKGL----------- 393
                               I S+L AC+ L  +SQ  E H Y ++K L           
Sbjct: 378 EALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDG 437

Query: 394 --SDLVILNAIVDVYGKCGNIDYSRNVFESIE--SKDVVSWTSMISSYVHNGLANEALEL 449
              DLV+ NA++D+Y KC +   +R +F SI    ++VV+WT MI  Y   G +N+AL+L
Sbjct: 438 DGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKL 497

Query: 450 FYLM--NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV---ASSLV 504
           F  M      V  ++ T+   L A + LS L+ GK+++ ++ R     E SV   A+ L+
Sbjct: 498 FSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRH-HEYESSVYFVANCLI 556

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMY++CG +D A  VF+ +  ++ + WTSM++  G+HGRGK A+D+F KM+   F PD I
Sbjct: 557 DMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDI 616

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           +FL LLYACSHSG++++G  + +IMR DY +    +HYAC++DLL R+  L++A++ ++ 
Sbjct: 617 SFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQE 676

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M +EP+A +W ALL ACRVHSN EL E    KL+ +   N G+Y LISN++A +R+WKDV
Sbjct: 677 MPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDV 736

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            ++R  M+ SG+KK PG SW++      SF   D+SH  S EIY  L  +  ++ +  GY
Sbjct: 737 ARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRI-KVMGY 795

Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
           V +T F LH+V++EEK  +L  HSE+LA+AYG+L ++ G  IRITKNLRVC DCHS    
Sbjct: 796 VPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIY 855

Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +S++   E++VRD++RFHHF+ G CSCG YW
Sbjct: 856 ISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 188/626 (30%), Positives = 305/626 (48%), Gaps = 71/626 (11%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG+  DA  + ++V       WN ++ A++  G   R +    RM   G   D FT 
Sbjct: 93  YLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTL 152

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P  +KAC  L     G+  HGL+   G++S  F+ N+LVAMY++      A  +FD +  
Sbjct: 153 PYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITR 212

Query: 122 K--EDVVLWNSIISAYSASGQCLEALGLFREMQRV------GLVTNAYTFVAALQACEDS 173
           K  +DV+ WNSI++A+        AL LF EM  +         ++  + V  L AC   
Sbjct: 213 KGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASL 272

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                  EIH+  +++G     +V NALI  YA+CG M +A  V   +E KD VSWN+M+
Sbjct: 273 KALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMV 332

Query: 234 TGFVQNDLYCKAMQFFREL---------------------QGAGQ--------------K 258
           TG+ Q+  +  A + F+ +                     +G GQ              +
Sbjct: 333 TGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSE 392

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS------------DLQIGNTLMDMY 306
           P+ V  ++ +SA   LG L  G E HAY++K+  +S            DL + N L+DMY
Sbjct: 393 PNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMY 452

Query: 307 AKCCCVNYMGRVFYQMT--AQDFISWTTIIAGYAQNNCHLKALELFRTV--QLEGLDADV 362
           +KC        +F  +    ++ ++WT +I GYAQ      AL+LF  +  +   +  + 
Sbjct: 453 SKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNA 512

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKG---LSDLVILNAIVDVYGKCGNIDYSRNVF 419
             I  +LMAC+ L  +   K+IH Y+ R      S   + N ++D+Y KCG++D +RNVF
Sbjct: 513 YTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVF 572

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           +S+  ++ VSWTSM+S Y  +G   EAL++F  M +A    D I+ +  L A S   ++ 
Sbjct: 573 DSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVD 632

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMI 535
           +G  L+ F I+R  + +  S    + ++D+ AR G LD A K    +  +    +W +++
Sbjct: 633 QG--LDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALL 690

Query: 536 NANGLHGR---GKVAIDLFYKMEAES 558
           +A  +H      + A++    M+AE+
Sbjct: 691 SACRVHSNVELAEYALNKLVSMKAEN 716



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/552 (25%), Positives = 245/552 (44%), Gaps = 93/552 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR---TVFTWNAMLGAYVSNGEPLRVLETYSRM------RV 51
           MY + GS+ DA  +FD+++++    V +WN+++ A+V    P   L+ +S M      + 
Sbjct: 193 MYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKA 252

Query: 52  LGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
                D  +   ++ ACA LK L    +IH   ++ G  +  F+ N+L+  YAKC   + 
Sbjct: 253 TNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKD 312

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR------------------ 153
           A  +F+ M E +DVV WN++++ Y+ SG+   A  LF+ M++                  
Sbjct: 313 AVNVFNVM-EFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYA 371

Query: 154 -----------------VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS------- 189
                             G   N+ T ++ L AC      + GME HA ++K        
Sbjct: 372 QRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDN 431

Query: 190 -----GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS--VSWNSMLTGFVQNDLY 242
                G    + V NALI MY++C     A  +   +  ++   V+W  M+ G+ Q    
Sbjct: 432 DFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDS 491

Query: 243 CKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG-FVSDLQ-I 298
             A++ F E+  +     P+       + A   L +L  GK++HAY  +   + S +  +
Sbjct: 492 NDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFV 551

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+DMY+KC  V+    VF  M  ++ +SWT++++GY  +    +AL++F  +Q  G 
Sbjct: 552 ANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGF 611

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------------IVDV 405
             D +    +L ACS           H  ++ +GL    I+ +             ++D+
Sbjct: 612 VPDDISFLVLLYACS-----------HSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDL 660

Query: 406 YGKCGNIDYS-RNVFESIESKDVVSWTSMISS-YVHNG--LANEALELFYLMNEANVESD 461
             + G +D + + + E         W +++S+  VH+   LA  AL     M   N    
Sbjct: 661 LARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAEN--DG 718

Query: 462 SITLVSALSAAS 473
           S TL+S + A +
Sbjct: 719 SYTLISNIYATA 730


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 264/656 (40%), Positives = 412/656 (62%), Gaps = 3/656 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +++ Q+L    A+ +I++Y     + EA  V   LE+   ++W S++  F    
Sbjct: 26  QLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQS 84

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L+ +A+  F E++ +G+ PD     + + +   + +L  G+ +H + ++ G   DL  GN
Sbjct: 85  LFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LM+MY+K   ++ + +VF  M  +D +S+ T+IAGYAQ+  +  AL + R +    L  
Sbjct: 145 ALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKP 204

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D   + SVL   S    + + KEIHGY+IRKG+ SD+ I +++VD+Y K   I+ S  VF
Sbjct: 205 DAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 264

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  +D +SW S+++ YV NG  NEAL LF  M  A V   ++   S + A + L+ L 
Sbjct: 265 SHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLH 324

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GK+L+G+++R GF     +AS+LVDMY++CG +  A K+F+ +   D + WT++I  + 
Sbjct: 325 LGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHA 384

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           LHG G  A+ LF +M+ +   P+ + F+A+L ACSH GL++E   +   M   Y L+   
Sbjct: 385 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 444

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYA + DLLGRA  LEEAY F+  M++EPT  VW  LL +C VH N EL E VA+K+  
Sbjct: 445 EHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 504

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           +D  N G YVL+ N++A++ +WK++ ++R+R+R  GL+K P  SWIE+ NK H F++ D+
Sbjct: 505 IDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDR 564

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH   D I + L  + E++E+E GYVA T  VLH+V+EE K ++L+GHSERLA+A+G++ 
Sbjct: 565 SHPSMDRINEFLKAVMEQMEKE-GYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIIN 623

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +  G+ IR+TKN+R+C DCH   K +S++  RE++VRD +RFHHF  G CSCGDYW
Sbjct: 624 TEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 240/460 (52%), Gaps = 17/460 (3%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           +A  +F  +    V  W +++  +       R L ++  MR  G   D   FP V+K+C 
Sbjct: 57  EALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCT 116

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
           M+ DL  G  +HG +++ G D   +  N+L+ MY+K       R++F+ M  K DVV +N
Sbjct: 117 MMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRK-DVVSYN 175

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           ++I+ Y+ SG   +AL + REM    L  +A+T  + L    +      G EIH   ++ 
Sbjct: 176 TVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRK 235

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G +  VY+ ++L+ MYA+  ++ ++  V   L  +DS+SWNS++ G+VQN  Y +A++ F
Sbjct: 236 GIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLF 295

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           R++  A  +P  V   + + A   L  L  GK+LH Y ++ GF  ++ I + L+DMY+KC
Sbjct: 296 RQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKC 355

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             +    ++F +M   D +SWT II G+A +    +A+ LF  ++ +G+  + +   +VL
Sbjct: 356 GNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 415

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSDLVILN-------AIVDVYGKCGNIDYSRNVFESI 422
            ACS +  +    E  GY     ++ +  LN       A+ D+ G+ G ++ + +    +
Sbjct: 416 TACSHVGLVD---EAWGYF--NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKM 470

Query: 423 ESKDVVS-WTSMISS-YVHNG--LANEALELFYLMNEANV 458
             +   S W++++SS  VH    LA +  E  + ++  N+
Sbjct: 471 RVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENM 510



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 192/406 (47%), Gaps = 26/406 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   +    ++F+ + ++ V ++N ++  Y  +G     L     M    +  DAFT
Sbjct: 149 MYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFT 208

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+   +   D+  G +IHG V++ G DS  +I +SLV MYAK      + ++F  + 
Sbjct: 209 LSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHL- 267

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D + WNS+++ Y  +G+  EAL LFR+M    +   A  F + + AC   +   LG 
Sbjct: 268 YRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGK 327

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   ++ G    +++A+AL+ MY++CG +  A  +  ++   D VSW +++ G   + 
Sbjct: 328 QLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHG 387

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E++  G KP+QV  V  ++A   +G +    E   Y      V  L   N
Sbjct: 388 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV---DEAWGYFNSMTKVYGL---N 441

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAGYAQNNCHLKALELF 350
             ++ YA     + +GR      A DFIS          W+T+++  + +    K LEL 
Sbjct: 442 QELEHYA--AVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVH----KNLELA 495

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR---KGL 393
             V  +    D   +G+ ++ C+      + KE+    +R   KGL
Sbjct: 496 EKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGL 541



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 107/221 (48%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           +I +++   + +K  SQ K++H   IR         + ++ +Y     +  +  VF+++E
Sbjct: 7   LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLE 66

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
           S  V++W S+I  +    L + AL  F  M  +    D     S L + + +  L+ G+ 
Sbjct: 67  SPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++GFI+R G + +    ++L++MY++   +D   KVF  +  KD++ + ++I      G 
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGM 186

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            + A+ +  +M      PD  T  ++L   S    + +GK+
Sbjct: 187 YEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKE 227


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 267/706 (37%), Positives = 430/706 (60%), Gaps = 3/706 (0%)

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           ++  Y+ S     AL  F  M+   +    Y F   L+ C D+S    G EIH + + SG
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +  ++    ++ MYA+C ++ +A  +  ++  +D V WN+M++G+ QN     A+    
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            +   G +PD +  V+ + A      L  G  +H Y ++ GF S + +   L+DMY+KC 
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            V+    +F  M  +  +SW ++I GY Q+     A+ +F+ +  EG+    + +   L 
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 371 ACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC+ L  + + K +H  + +  L SD+ ++N+++ +Y KC  +D + ++F+++ +K +VS
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           W +MI  Y  NG  NEAL  F  M   N++ DS T+VS + A + LSI ++ K ++G +I
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           R+  +    V ++LVDMYA+CGA+  A K+F+ +  + +I W +MI+  G HG GK +++
Sbjct: 361 RRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVE 420

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLL 609
           LF +M+  +  P+ ITFL  L ACSHSGL+ EG  F E M+ DY ++P  +HY  +VDLL
Sbjct: 421 LFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLL 480

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV 669
           GRA  L +A+ F++ M I+P   V+ A+LGAC++H N +LGE  A ++ +L+P + G +V
Sbjct: 481 GRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHV 540

Query: 670 LISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYK 729
           L++N++A +  W  V +VR  M  SGL+KTPG S +EIGN++HSF +   SH +S +IY 
Sbjct: 541 LLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYS 600

Query: 730 KLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRIT 789
            L  + +++ R  GYV  T  + H+VE++ KVQ+L  HSE+LAIA+G+L ++ G+ I I 
Sbjct: 601 YLETLVDEI-RAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIR 658

Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           KNLRVC DCH+  K +S + GRE++VRD +RFH F+ GVCSCGDYW
Sbjct: 659 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 175/556 (31%), Positives = 293/556 (52%), Gaps = 17/556 (3%)

Query: 29  MLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
           ML  Y  +      L  +SRM+   +    + F  ++K C    DL  G +IHG V+  G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
           +    F +  +V MYAKC     A  +FDRM E+ D+V WN++IS Y+ +G    AL L 
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPER-DLVCWNTMISGYAQNGFAKVALMLV 119

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
             M   G   ++ T V+ L A  D+    +GM +H   +++G    V V+ AL+ MY++C
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G ++ A  +   ++++  VSWNSM+ G+VQ+     AM  F+++   G +P  V  + A+
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            A   LG+L  GK +H    +    SD+ + N+L+ MY+KC  V+    +F  +  +  +
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           SW  +I GYAQN C  +AL  F  +Q   +  D   + SV+ A + L    Q K IHG +
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLV 359

Query: 389 IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           IR+ L  ++ ++ A+VD+Y KCG I  +R +F+ + ++ V++W +MI  Y  +GL   ++
Sbjct: 360 IRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSV 419

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF-IIRKGFNLEGSVA--SSLV 504
           ELF  M +  ++ + IT + ALSA S   ++++G  L  F  ++K + +E ++    ++V
Sbjct: 420 ELFKEMKKGTIKPNDITFLCALSACSHSGLVEEG--LCFFESMKKDYGIEPTMDHYGAMV 477

Query: 505 DMYARCGALDIANKVFNCVQTKD-LILWTSMINANGLHGRGKVAIDLFYKMEAESFA--P 561
           D+  R G L+ A      +  K  + ++ +M+ A  +H      +DL  K   E F   P
Sbjct: 478 DLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKN----VDLGEKAAFEIFKLNP 533

Query: 562 D---HITFLALLYACS 574
           D   +   LA +YA +
Sbjct: 534 DDGGYHVLLANIYATA 549



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 212/436 (48%), Gaps = 13/436 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  + DA  +FD++ +R +  WN M+  Y  NG     L    RM   G   D+ T
Sbjct: 74  MYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSIT 133

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A A  + L  G  +HG VL+ G++S   +  +LV MY+KC     AR +FD M 
Sbjct: 134 IVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMD 193

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  VV WNS+I  Y  SG    A+ +F++M   G+     T + AL AC D      G 
Sbjct: 194 HRT-VVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGK 252

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    +   +  V V N+LI+MY++C ++  AA +   L NK  VSWN+M+ G+ QN 
Sbjct: 253 FVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNG 312

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E+Q    KPD    V+ + A   L      K +H   I++    ++ +  
Sbjct: 313 CVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMT 372

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  ++   ++F  M A+  I+W  +I GY  +     ++ELF+ ++   +  
Sbjct: 373 ALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKP 432

Query: 361 DVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           + +     L ACS       GL      K+ +G  I   +       A+VD+ G+ G ++
Sbjct: 433 NDITFLCALSACSHSGLVEEGLCFFESMKKDYG--IEPTMDH---YGAMVDLLGRAGRLN 487

Query: 414 YSRNVFESIESKDVVS 429
            + +  + +  K  ++
Sbjct: 488 QAWDFIQKMPIKPGIT 503



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 173/355 (48%), Gaps = 9/355 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV  A  +FD +  RTV +WN+M+  YV +G+    +  + +M   G+     T
Sbjct: 175 MYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVT 234

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + ACA L DL+ G  +H LV +   DS   ++NSL++MY+KC     A  +F  + 
Sbjct: 235 VMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLR 294

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  +V WN++I  Y+ +G   EAL  F EMQ   +  +++T V+ + A  + S      
Sbjct: 295 NKT-LVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAK 353

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   ++   +  V+V  AL+ MYA+CG +  A  +   +  +  ++WN+M+ G+  + 
Sbjct: 354 WIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHG 413

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L   +++ F+E++    KP+ +  + A+SA    G +  G         +    D  I  
Sbjct: 414 LGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEG-----LCFFESMKKDYGIEP 468

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           T MD Y     V+ +GR      A DFI    I  G       L A ++ + V L
Sbjct: 469 T-MDHYG--AMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDL 520


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 289/793 (36%), Positives = 466/793 (58%), Gaps = 6/793 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           Y +    + +  +F  +S    V+ WN+++ A   NG   + L  Y+ MR   +  DAFT
Sbjct: 64  YAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFT 123

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP VI +CA + DL+ G  +H   ++ G++S  +I N+L+ MY++  D   AR +F+ M 
Sbjct: 124 FPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMS 183

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V WNS+IS Y ++G   +AL ++ + +  G+V + +T  + L AC        G+
Sbjct: 184 NR-DSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGV 242

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    K G    V + N L++MY +  ++ EA  V  ++  KDSV+WN+M+ G+ Q  
Sbjct: 243 AVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLG 302

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  +++ F ++   G  PD +   + + A G+ G+L  GK +H Y I  GF  D    N
Sbjct: 303 RHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACN 361

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  +     VF     +D ++W ++I GY Q+  + + LE F+ +++E    
Sbjct: 362 ILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KP 420

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D +    +L   S L  ++Q + IH  +I+ G  ++L+I N+++DVY KCG +D    VF
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVF 480

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             + + D++SW ++I+S VH        ++   M    +  D  T++  L   S L++ +
Sbjct: 481 SYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRR 540

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GKE++G+I + GF     + ++L++MY++CG+L+   KVF  ++ KD++ WT++I+A G
Sbjct: 541 QGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFG 600

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           ++G GK A+  F  ME     PD + F+A ++ACSHSG++ EG +F + M+ DY L+P  
Sbjct: 601 MYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRM 660

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC+VDLL R+  L +A +F+ SM ++P A +W ALL ACR   N  + + V+KK+LE
Sbjct: 661 EHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILE 720

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+  + G YVL+SN++A   KW  V+ VR  M+  GLKK PGSSWIEI  +++ F   DK
Sbjct: 721 LNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDK 780

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           S  + D++ K L E   +L  + GYVA  QF LH+VEE++K  ML GHSERLAIA+G+L 
Sbjct: 781 SFEQYDKV-KDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLN 839

Query: 780 STEGSLIRITKNL 792
           +  GS + I   L
Sbjct: 840 TKPGSPLLIFPTL 852



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 179/552 (32%), Positives = 302/552 (54%), Gaps = 10/552 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +   + +A  +F+++S R   +WN+++  Y SNG     L+ Y + R+ G+  D FT
Sbjct: 165 MYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFT 224

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  L  +  G  +HG++ K G      I N L++MY K    R+AR++F +M 
Sbjct: 225 MSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMA 284

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V WN++I  Y+  G+   ++ LF +M   G V +  +  + ++AC  S    +G 
Sbjct: 285 VK-DSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGK 342

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   + SG        N LI MYA+CG +  A  V    + KDSV+WNS++ G+ Q+ 
Sbjct: 343 FVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSG 402

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            Y + ++ F+ ++   +KPD V  V  +S   +L ++  G+ +H   IK GF ++L IGN
Sbjct: 403 YYKEGLESFKMMK-MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGN 461

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+D+YAKC  ++ + +VF  M+A D ISW T+IA     +      ++   ++ EGL  
Sbjct: 462 SLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMP 521

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D   +  +L  CS L    Q KEIHGYI + G  S++ I NA++++Y KCG+++    VF
Sbjct: 522 DEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVF 581

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + ++ KDVV+WT++IS++   G   +AL+ F  M  + V  DS+  ++ + A S   ++K
Sbjct: 582 KYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVK 641

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANK-VFNCVQTKDLILWTSMI 535
           +G  L  F  ++  +NLE  +   + +VD+ AR G L  A + + +     D  LW +++
Sbjct: 642 EG--LRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALL 699

Query: 536 NANGLHGRGKVA 547
           +A    G   +A
Sbjct: 700 SACRARGNTNIA 711



 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 183/617 (29%), Positives = 315/617 (51%), Gaps = 10/617 (1%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +H L++  G   +      L++ YA+  D   +  +F  +    +V LWNSII A + +G
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
              +ALG + EM+   L  +A+TF + + +C       LG  +H   ++ G    +Y+ N
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGN 160

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP 259
           ALI MY+R   +  A  V  ++ N+DSVSWNS+++G+  N  +  A+  + + +  G  P
Sbjct: 161 ALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVP 220

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D     + + A G L  +  G  +H    K G   D+ IGN L+ MY K   +    RVF
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF 280

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
            +M  +D ++W T+I GYAQ   H  +++LF  + ++G   D++ I S + AC     + 
Sbjct: 281 SKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQ 339

Query: 380 QTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             K +H Y+I  G   D V  N ++D+Y KCG++  ++ VF++ + KD V+W S+I+ Y 
Sbjct: 340 VGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYT 399

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            +G   E LE F +M +   + DS+T V  LS  S L+ + +G+ ++  +I+ GF  E  
Sbjct: 400 QSGYYKEGLESFKMM-KMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELI 458

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           + +SL+D+YA+CG +D   KVF+ +   D+I W ++I ++       V   +  +M  E 
Sbjct: 459 IGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEG 518

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
             PD  T L +L  CS   +  +GK+    I +  ++ +  P   A L+++  +   LE 
Sbjct: 519 LMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNV-PIGNA-LIEMYSKCGSLEN 576

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
             +  + M+ E     W AL+ A  ++   +   + A + +EL    P +   I+ +FA 
Sbjct: 577 CIKVFKYMK-EKDVVTWTALISAFGMYGEGK-KALKAFQDMELSGVLPDSVAFIAFIFAC 634

Query: 678 SRKWKDVEQVRM--RMR 692
           S      E +R   RM+
Sbjct: 635 SHSGMVKEGLRFFDRMK 651



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 2/218 (0%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVFESI-ES 424
           S+L   S  K   Q + +H  II  GLS  VI +  ++  Y +  +   S +VF SI  +
Sbjct: 24  SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
            +V  W S+I +  HNGL  +AL  +  M E  ++ D+ T  S +++ + +  L+ G  +
Sbjct: 84  NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +   +  GF  +  + ++L+DMY+R   LD A  VF  +  +D + W S+I+    +G  
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           + A+D+++K       PD  T  ++L AC     + EG
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 291/818 (35%), Positives = 466/818 (56%), Gaps = 44/818 (5%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D  TF  V+ +C+   D+  G  +H  +    ++    + N+L++MY KC     AR +F
Sbjct: 6   DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65

Query: 117 DRMGEKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           + M  ++ +VV WN++I+AY+ +G   EAL L+  M   GL T+  TFV+ L AC   S 
Sbjct: 66  ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SS 122

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G EIH     SG +    +ANAL+ MYAR G + +A  +   L+ +D  SWN+++  
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
             Q+  +  A++ F+E++    KP+    +N +S       L  G+++HA  +  GF SD
Sbjct: 183 HSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSD 241

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           L +   L++MY KC   +    VF +M  +D +SW  +I  Y QN    +ALEL++ + +
Sbjct: 242 LVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDM 301

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
           EG         S+L ACS +K ++Q + +H +I+ +GL S++ +  A+V++Y KCG+++ 
Sbjct: 302 EGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEE 361

Query: 415 SRNVFESIESKDVVSWTS----------------------------------MISSYVHN 440
           +R VF +++++D V+W++                                  MI++YV N
Sbjct: 362 ARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQN 421

Query: 441 GLANEALELFYLMN-EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           G A  A+++F  M   A ++ D++T ++ L A +SL  L + K L+  I          V
Sbjct: 422 GCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVV 481

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            ++L++MYARCG+L+ A ++F   + K ++ WT+M+ A   +GR   A+DLF +M+ E  
Sbjct: 482 TNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGV 541

Query: 560 APDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAY 619
            PD +T+ ++L+ C+H G + +G ++   M   + L P  +H+A +VDLLGR+  L +A 
Sbjct: 542 KPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAK 601

Query: 620 QFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASR 679
           + + SM  EP    W   L ACR+H   ELGE  A+++ ELDP +   Y+ +SN++AA  
Sbjct: 602 ELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHG 661

Query: 680 KWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLE 739
            W+ V  VR +M   GLKK PG S+IE+  K+H F +  K H  +DEI ++L  +   L 
Sbjct: 662 MWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRL-HGLM 720

Query: 740 REGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKST-EGSLIRITKNLRVCVDC 798
           R  GYV  T+ VLH+V E EK  ML  HSE++AIA+G++ S   G  IR+ KNLRVC DC
Sbjct: 721 RAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDC 780

Query: 799 HSFCKLVSRLFGRELVVRDANRFHHFEA-GVCSCGDYW 835
           H+  K ++R+ GR++++RD NRFH F + G CSCGDYW
Sbjct: 781 HTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 180/604 (29%), Positives = 308/604 (50%), Gaps = 48/604 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVS--QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MYGKC S++DA  +F+ +   QR V +WNAM+ AY  NG     L  Y RM + G+  D 
Sbjct: 51  MYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDH 110

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            TF  V+ AC+ L     G +IH  V   G DS   + N+LV MYA+      A+++F  
Sbjct: 111 VTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQS 167

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           + +  D   WN++I A+S SG    AL +F+EM +  +  N+ T++  +           
Sbjct: 168 L-QTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPE 225

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G +IHA  V +G +  + VA ALI MY +CG   EA  V  +++ +D VSWN M+  +VQ
Sbjct: 226 GRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQ 285

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N  + +A++ +++L   G K  +   V+ + A   +  L  G+ +H++ +++G  S++ +
Sbjct: 286 NGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAV 345

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA-------------------- 338
              L++MYAKC  +    +VF  M  +D ++W+T+I  YA                    
Sbjct: 346 ATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGS 405

Query: 339 --------------QNNCHLKALELFRTVQ-LEGLDADVMIIGSVLMACSGLKCMSQTKE 383
                         QN C + A+++FR +    GL  D +   +VL AC+ L  +S+ K 
Sbjct: 406 RDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKA 465

Query: 384 IHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           +H  I    L S++V+ N ++++Y +CG+++ +  +F + + K VVSWT+M++++   G 
Sbjct: 466 LHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGR 525

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVAS 501
             EAL+LF  M+   V+ D +T  S L   +    L++G +         G        +
Sbjct: 526 YAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFA 585

Query: 502 SLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR---GKVAIDLFYKMEAE 557
           ++VD+  R G L  A ++   +    D + W + + A  +HG+   G+ A +  Y+++  
Sbjct: 586 AMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPS 645

Query: 558 SFAP 561
           S AP
Sbjct: 646 STAP 649



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 209/387 (54%), Gaps = 9/387 (2%)

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
           ++PD V  +  + +    G++  G+ LH       F  D  +GN L+ MY KC  +    
Sbjct: 3   RQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDAR 62

Query: 317 RVFYQMT--AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
            VF  M    ++ +SW  +IA YAQN    +AL L+  + L+GL  D +   SVL ACS 
Sbjct: 63  SVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS 122

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L   +Q +EIH  +   GL     L NA+V +Y + G++  ++ +F+S++++D  SW ++
Sbjct: 123 L---AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I ++  +G  + AL +F  M + +++ +S T ++ +S  S+  +L +G++++  I+  GF
Sbjct: 180 ILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
           + +  VA++L++MY +CG+   A +VF+ ++ +D++ W  MI     +G    A++L+ K
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQK 298

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           ++ E F     TF+++L ACS    + +G + +     +  LD        LV++  +  
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGA 640
            LEEA +   +M+    A  W  L+GA
Sbjct: 358 SLEEARKVFNAMK-NRDAVAWSTLIGA 383


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 287/808 (35%), Positives = 473/808 (58%), Gaps = 6/808 (0%)

Query: 27  NAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLK 86
           N+++      G+  + L     M+ L +SV+  T+  +++ C   +    G+++H  V K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 87  CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALG 146
                   + N+L++M+ +  D  +A  +F +M E+ D+  WN ++  Y+ +G   EAL 
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAER-DLFSWNVLVGGYAKAGYFDEALN 181

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           L+  M  VG+  + YTF   L+ C        G E+H   ++ G    V V NALI MY 
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +CG +  A  V  ++  +D +SWN+M++G+ +ND+  + ++ F  ++     PD +   +
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTS 301

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            +SA   LG+   G+E+H Y IK GFV+++ + N+L+ M++   C +    VF +M  +D
Sbjct: 302 VISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKD 361

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SWT +I+GY +N    KA+E +  ++ EG+  D + I SVL AC+GL  + +   +H 
Sbjct: 362 LVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHE 421

Query: 387 YIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           +  R GL+  VI+ N+++D+Y KC  ID +  VF  I +K+V+SWTS+I     N  + E
Sbjct: 422 FADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFE 481

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL  F  M   +++ +S+TLVS LSA + +  L  GKE++   +R G   +G + ++L+D
Sbjct: 482 ALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLD 540

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY RCG ++ A   FN  + KD+  W  ++      G+G +A++LF+KM      PD IT
Sbjct: 541 MYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEIT 599

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F +LL ACS SG++ +G ++ E M   + + P  +HYA +VDLLGRA  LE+AY+F++ M
Sbjct: 600 FTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKM 659

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
            I+P   +W ALL ACR++ N ELGE+ A+ + E+D  + G Y+L+ N++A S KW +V 
Sbjct: 660 PIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVA 719

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
           +VR  MR + L   PG SW+E+  ++H+F+  D  H +  EI   L    EK+E  G  +
Sbjct: 720 RVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATG--L 777

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
           + ++    +  +  K ++  GHSERLAIA+G++ +  G+ I +TKNL +C +CH+  K +
Sbjct: 778 SMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFI 837

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGD 833
           S++  R + VRD  +FHHF+ GVCSCGD
Sbjct: 838 SKVVRRGISVRDTEQFHHFKDGVCSCGD 865



 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 204/597 (34%), Positives = 334/597 (55%), Gaps = 15/597 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ + G +++A  +F K+++R +F+WN ++G Y   G     L  Y RM  +GI  D +T
Sbjct: 138 MFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYT 197

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV++ C  L DL  G ++H  V++ G++S   +VN+L+ MY KC D   AR +FDRM 
Sbjct: 198 FPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRM- 256

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D + WN++IS Y  +  CLE L LF  M+   +  +  T  + + ACE    E LG 
Sbjct: 257 PRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR 316

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   +K+G   +V V N+LI M++  G   EA  V  ++E KD VSW +M++G+ +N 
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG 376

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  KA++ +  ++  G  PD++   + +SA   LG L  G  LH +A + G  S + + N
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVAN 436

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMY+KC C++    VF+++  ++ ISWT+II G   N    +AL  F+ + L  L  
Sbjct: 437 SLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SLKP 495

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           + + + SVL AC+ +  +S  KEIH + +R GL  D  + NA++D+Y +CG ++ + N F
Sbjct: 496 NSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF 555

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            S E KDV SW  +++ Y   G    A+ELF+ M E++V  D IT  S L A S   ++ 
Sbjct: 556 NSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVT 614

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMIN 536
            G E    +  K F++  ++   +S+VD+  R G L+ A +    +    D  +W +++N
Sbjct: 615 DGLEYFESMEHK-FHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           A  ++     G++A    ++M+ +S    +   L  LYA   SG  +E  +  +IMR
Sbjct: 674 ACRIYQNVELGELAAQHIFEMDTKSVG--YYILLCNLYA--DSGKWDEVARVRKIMR 726


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 291/763 (38%), Positives = 457/763 (59%), Gaps = 12/763 (1%)

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           +++   K+H L+L  G      +   L+ +Y    D   +R  FD +  K+++  WNSII
Sbjct: 34  NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYI-HKKNIFSWNSII 92

Query: 133 SAYSASGQCLEALG----LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           SAY   G+  EA+     LF       L  + YTF   L+AC        G ++H    K
Sbjct: 93  SAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSL---VDGKKVHCCVFK 149

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            G    V+VA +L+ +Y+R G +  A  V   +  KD  SWN+M++GF QN     A+  
Sbjct: 150 MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGV 209

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
              ++G G K D +   + +    +  +++NG  +H + +K G  SD+ + N L++MY+K
Sbjct: 210 LNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSK 269

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
              +     VF QM  +D +SW +IIA Y QNN    AL  F+ +QL G+  D++ + S+
Sbjct: 270 FGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
               S L     ++ I G++IR+     D+VI NA+V++Y K G ++ +  VF+ +  KD
Sbjct: 330 TSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKD 389

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEA-NVESDSITLVSALSAASSLSILKKGKELN 485
            +SW ++++ Y  NGLA+EA++ + +M E  +   +  T VS + A S +  L++G +++
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIH 449

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
             +I+    L+  VA+ L+D+Y +CG L+ A  +F  +     + W ++I + G+HGRG+
Sbjct: 450 AKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGE 509

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A+ LF  M AE    DHITF++LL ACSHSGL++EG+K  +IM+ +Y + P  +HY C+
Sbjct: 510 EALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCM 569

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           VDLLGRA +LE+AY+ VR+M I+P A +W ALL AC+++ N ELG + + +LLE+D  N 
Sbjct: 570 VDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENV 629

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
           G YVL+SN++A + KW+ V +VR   R  GL+KTPG S + +G+K   F   +++H +  
Sbjct: 630 GYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYT 689

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
           EIYK+L  ++ K+ +  GYV    FV  ++EE+EK Q+L  HSERLAIA+G++ +   S 
Sbjct: 690 EIYKELKVLSAKM-KSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSP 748

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
           IRI KNLRVC DCH+  K +SR+  RE+VVRD+NRFHHF+ G+
Sbjct: 749 IRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGI 791



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 174/586 (29%), Positives = 315/586 (53%), Gaps = 22/586 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----GISV 56
           +Y   G +  +   FD + ++ +F+WN+++ AYV  G+    +   +++  +     +  
Sbjct: 63  LYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRP 122

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D +TFP ++KAC  L D   G K+H  V K G++   F+  SLV +Y++      A ++F
Sbjct: 123 DFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVF 179

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
             M  K DV  WN++IS +  +G    ALG+   M+  G+  +  T  + L  C  S   
Sbjct: 180 VDMPVK-DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDV 238

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G+ IH   +K G +  V+V+NALI MY++ G++ +A  V  Q+E +D VSWNS++  +
Sbjct: 239 INGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY 298

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS-D 295
            QN+    A++FF+ +Q  G +PD +  V+  S   +L +    + +  + I++ ++  D
Sbjct: 299 EQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKD 358

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + IGN L++MYAK   +N    VF Q+  +D ISW T++ GY QN    +A++ +  ++ 
Sbjct: 359 VVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME- 417

Query: 356 EGLD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
           E  D   +     S++ A S +  + Q  +IH  +I+  L  D+ +   ++D+YGKCG +
Sbjct: 418 ECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRL 477

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + + ++F  I     V W ++I+S   +G   EAL+LF  M    V++D IT VS LSA 
Sbjct: 478 EDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSAC 537

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANK-VFNCVQTKDLI 529
           S   ++ +G++    I++K + ++ S+     +VD+  R G L+ A + V N     D  
Sbjct: 538 SHSGLVDEGQKCFD-IMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDAS 596

Query: 530 LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +W ++++A  ++G    G +A D   ++++E+    +   L+ +YA
Sbjct: 597 IWGALLSACKIYGNAELGTLASDRLLEVDSENVG--YYVLLSNIYA 640


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 300/837 (35%), Positives = 468/837 (55%), Gaps = 27/837 (3%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y K G + +A  LFD +  R V  WN M+ AYV  G     L  +S     G+  D  T
Sbjct: 771  IYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVT 830

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
                   C + +           V+K   +  ++ +  L A   K +       ++D   
Sbjct: 831  L------CTLAR-----------VVKSKQNVLEWQLKQLKAYGTKLF-------MYDDDD 866

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  DV+ WN  +S +   G+  EA+  F +M    +  +  TFV  L      +   LG 
Sbjct: 867  DGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGK 926

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +IH   V+SG +  V V N LI MY + G ++ A  V +Q+   D VSWN+M++G   + 
Sbjct: 927  QIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSG 986

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIG 299
            L   ++  F +L   G  PDQ    + + A   LG   +   ++HA A+K G V D  + 
Sbjct: 987  LEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVS 1046

Query: 300  NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             TL+D+Y+K   +     +F      D  SW  ++ GY  +    KAL L+  +Q  G  
Sbjct: 1047 TTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGER 1106

Query: 360  ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            A+ + + +   A  GL  + Q K+I   ++++G + DL +++ ++D+Y KCG ++ +R +
Sbjct: 1107 ANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRI 1166

Query: 419  FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
            F  I S D V+WT+MIS  V NG    AL  ++ M  + V+ D  T  + + A S L+ L
Sbjct: 1167 FNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTAL 1226

Query: 479  KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            ++G++++   ++     +  V +SLVDMYA+CG ++ A  +F    T  +  W +MI   
Sbjct: 1227 EQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGL 1286

Query: 539  GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
              HG  + A+  F +M++    PD +TF+ +L ACSHSGL++E  +    M+  Y ++P 
Sbjct: 1287 AQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPE 1346

Query: 599  PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
             EHY+CLVD L RA  + EA + + SM  E +A ++  LL ACRV  ++E G+ VA+KLL
Sbjct: 1347 IEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLL 1406

Query: 659  ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
             L+P +   YVL+SNV+AA+ +W++V   R  MR + +KK PG SW+++ NK+H F+A D
Sbjct: 1407 ALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGD 1466

Query: 719  KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            +SH E+D IY K+  I +++ RE GY+  T F L +VEEE+K   LY HSE+LAIAYG++
Sbjct: 1467 RSHEETDVIYNKVEYIMKRI-REEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLM 1525

Query: 779  KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            K+   + +R+ KNLRVC DCH+  K +S++F RE+V+RDANRFHHF +GVCSCGDYW
Sbjct: 1526 KTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 196/654 (29%), Positives = 319/654 (48%), Gaps = 36/654 (5%)

Query: 1    MYGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
            MY KCGS+  A +LFD    + R + TWNA+L A+            +  +R   +S   
Sbjct: 670  MYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARD--GFHLFRLLRRSFVSATR 727

Query: 59   FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
             T   V K C +         +HG  +K G     F+  +LV +YAK    R+AR LFD 
Sbjct: 728  HTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDG 787

Query: 119  MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
            MG + DVVLWN ++ AY  +G   EAL LF E  R GL              +D +  TL
Sbjct: 788  MGLR-DVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRP------------DDVTLCTL 834

Query: 179  GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
                 A  VKS QN+  +    L A        T+        +  D ++WN  L+ F+Q
Sbjct: 835  -----ARVVKSKQNVLEWQLKQLKAY------GTKLFMYDDDDDGSDVIAWNKTLSWFLQ 883

Query: 239  NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                 +A+  F ++  +    D +  V  +S    L  L  GK++H   ++ G    + +
Sbjct: 884  RGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSV 943

Query: 299  GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            GN L++MY K   V+    VF+QM   D +SW T+I+G A +     ++ +F  +   GL
Sbjct: 944  GNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGL 1003

Query: 359  DADVMIIGSVLMACSGL--KCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
              D   + SVL ACS L   C   T +IH   ++ G+  D  +   ++DVY K G ++ +
Sbjct: 1004 LPDQFTVASVLRACSSLGGGCHLAT-QIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA 1062

Query: 416  RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
              +F + +  D+ SW +M+  Y+ +G   +AL L+ LM E+   ++ ITL +A  AA  L
Sbjct: 1063 EFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGL 1122

Query: 476  SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
              LK+GK++   ++++GFNL+  V S ++DMY +CG ++ A ++FN + + D + WT+MI
Sbjct: 1123 VGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMI 1182

Query: 536  NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQ 594
            +    +G+ + A+  ++ M      PD  TF  L+ ACS    + +G++     ++ +  
Sbjct: 1183 SGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCA 1242

Query: 595  LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
             DP+      LVD+  +  ++E+A    +       A  W A++     H N E
Sbjct: 1243 FDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTSRIAS-WNAMIVGLAQHGNAE 1293



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 159/650 (24%), Positives = 290/650 (44%), Gaps = 52/650 (8%)

Query: 48   RMRVLGISVDAFTFPC-----------VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV 96
            R+R    + + F  P            +++      DL  G + H  +L  G+    F+ 
Sbjct: 605  RLRAATSTANPFIPPAHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLT 664

Query: 97   NSLVAMYAKCYDFRKARQLFDRMGE-KEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            N+L+ MY+KC     AR+LFD   +   D+V WN+I+SA++   +  +   LFR ++R  
Sbjct: 665  NNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKAR--DGFHLFRLLRRSF 722

Query: 156  LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
            +    +T     + C  S+  +    +H   VK G    V+VA AL+ +YA+ G++ EA 
Sbjct: 723  VSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREAR 782

Query: 216  GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV--CTVNAVSASGR 273
             +   +  +D V WN M+  +V   L  +A+  F E    G +PD V  CT+  V  S +
Sbjct: 783  VLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQ 842

Query: 274  LGNLLNG--KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
              N+L    K+L AY  K             + MY                   D I+W 
Sbjct: 843  --NVLEWQLKQLKAYGTK-------------LFMYDD------------DDDGSDVIAWN 875

Query: 332  TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
              ++ + Q     +A++ F  +    +  D +    +L   +GL C+   K+IHG ++R 
Sbjct: 876  KTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRS 935

Query: 392  GLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
            GL  +V + N ++++Y K G++  +R VF  +   D+VSW +MIS    +GL   ++ +F
Sbjct: 936  GLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMF 995

Query: 451  YLMNEANVESDSITLVSALSAASSL-SILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
              +    +  D  T+ S L A SSL        +++   ++ G  L+  V+++L+D+Y++
Sbjct: 996  VDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSK 1055

Query: 510  CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
             G ++ A  +F      DL  W +M++   + G    A+ L+  M+      + IT    
Sbjct: 1056 SGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANA 1115

Query: 570  LYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
              A      + +GK+    +++  + LD +    + ++D+  +   +E A +    +   
Sbjct: 1116 AKAAGGLVGLKQGKQIQAVVVKRGFNLDLFV--ISGVLDMYLKCGEMESARRIFNEIP-S 1172

Query: 629  PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
            P    W  ++  C V + +E   +     + L    P  Y   + V A S
Sbjct: 1173 PDDVAWTTMISGC-VENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACS 1221


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 303/830 (36%), Positives = 469/830 (56%), Gaps = 11/830 (1%)

Query: 11  AEQLFDKVSQR-TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           A    D++ +R      N +L  Y   G    VL+ +S  R  G+ VD+ T  CV+KAC 
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW 128
            + D   G ++H L +KCG+D  +     SLV MY KC    +  ++F+ M  K++VV W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGM-PKKNVVTW 169

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
            S+++  + +    E + LF  M+  G+  N +TF + L A        LG  +HA +VK
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            G    V+V N+L+ MYA+CG + +A  V   +E +D VSWN+++ G   N+   +A+Q 
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           F E +    K  Q      +     L  L   ++LH+  +K GF     +   L D Y+K
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349

Query: 309 CCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
           C  +     +F   T +++ +SWT II+G  QN     A+ LF  ++ + +  +     +
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L A   +       +IH  +I+     +  +  A++  Y K G+ + + ++F+ IE KD
Sbjct: 410 MLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKD 465

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI-LKKGKELN 485
           VV+W++M+S +   G    A  LF  M    ++ +  T+ S + A +  S  + +G++ +
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
              I+  ++    V+S+LV MY+R G +D A  VF     +DL+ W SMI+    HG   
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSM 585

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            AI+ F +MEA     D +TFLA++  C+H+GL+ EG+++ + M  D++++P  EHYAC+
Sbjct: 586 KAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACM 645

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           VDL  RA  L+E    +R M     A VW  LLGACRVH N ELG+  A KLL L+P + 
Sbjct: 646 VDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDS 705

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
             YVL+SN++AA+ KWK+ ++VR  M    +KK  G SWI+I NK+HSFIA DKSH  SD
Sbjct: 706 STYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSD 765

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
           +IYKKL  I  +L+++ GY   T FVLH++ E++K  ML  HSERLA+A+G++ +  G+ 
Sbjct: 766 QIYKKLKVIITRLKQD-GYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTP 824

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++I KNLRVC DCH   K+VS +  RE+++RD +RFHHF  G CSCGD+W
Sbjct: 825 LQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 159/602 (26%), Positives = 296/602 (49%), Gaps = 19/602 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV +  ++F+ + ++ V TW ++L           V+  + RMR  GI  + FT
Sbjct: 144 MYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFT 203

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ A A    LD G ++H   +K G  S+ F+ NSL+ MYAKC     A+ +F+ M 
Sbjct: 204 FASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM- 262

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  D+V WN++++    +   LEAL LF E +         T+   ++ C +     L  
Sbjct: 263 ETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALAR 322

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQN 239
           ++H+  +K G +L   V  AL   Y++CG++ +A  +      +++ VSW ++++G +QN
Sbjct: 323 QLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQN 382

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A+  F  ++     P++      + AS  L  L    ++HA  IK  +     +G
Sbjct: 383 GDIPLAVVLFSRMREDRVMPNEFTYSAMLKAS--LSIL--PPQIHAQVIKTNYQHIPSVG 438

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+  Y+K         +F  +  +D ++W+ +++ +AQ      A  LF  + ++G+ 
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498

Query: 360 ADVMIIGSVLMACSGLKC-MSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRN 417
            +   I SV+ AC+     + Q ++ H   I+    D + + +A+V +Y + GNID ++ 
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VFE    +D+VSW SMIS Y  +G + +A+E F  M  + ++ D +T ++ +   +   +
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGL 618

Query: 478 LKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALD-IANKVFNCVQTKDLILWTSMI 535
           + +G++    ++R    N      + +VD+Y+R G LD   + + +       ++W +++
Sbjct: 619 VVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
            A  +H     GK + D    +E      D  T++ L    + +G   E  +  ++M  D
Sbjct: 679 GACRVHKNVELGKFSADKLLSLEPH----DSSTYVLLSNIYAAAGKWKERDEVRKLM--D 732

Query: 593 YQ 594
           Y+
Sbjct: 733 YR 734


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 297/838 (35%), Positives = 480/838 (57%), Gaps = 5/838 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YG    VLDA++LF ++ +R V +W A++ A  SNG     L  Y RMR   I+ +A  
Sbjct: 88  LYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANA 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+  C  L+D   G ++   V+  G      + NSL++M         A +LF RM 
Sbjct: 148 FATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRM- 206

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLG 179
           E+ D V WN+++S YS  G C ++  +F +M+R GL+  +A T  + +  C  S + + G
Sbjct: 207 EERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYG 266

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H+  +++G +  + V NAL+ MY+  GK+ +A  + + +  +D +SWN+M++ +VQN
Sbjct: 267 SGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQN 326

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A++   +L    + PD++   +A+ A    G L++G+ +HA  ++     +L +G
Sbjct: 327 GNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVG 386

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+ MY KC  +    R+F  M   D +S   +I  YA      KA+++F  ++   + 
Sbjct: 387 NSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVK 446

Query: 360 ADVMIIGSVLMA-CSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRN 417
            + + I ++L +  S     +    +H Y I  G LSD  + N+++ +Y KCG+++ S N
Sbjct: 447 LNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNN 506

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ I ++ VVSW +MI++ V +G   E+L+LF  M       D I L   +S+++SL+ 
Sbjct: 507 VFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLAS 566

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L++G +L+G  ++ G   +  V ++ +DMY +CG +D   K+      +    W ++I+ 
Sbjct: 567 LEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISG 626

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              +G  K A + F  M +    PD++TF+ LL ACSH+GL+++G  +   M   + + P
Sbjct: 627 YARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSP 686

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             +H  C+VD+LGR     EA +F+  M + P   +W +LL + R H N ++G   AK+L
Sbjct: 687 GIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRL 746

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           LELDP +   YVL+SN++A S +W DV++VR  M+   L K P  SW++   ++ +F   
Sbjct: 747 LELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIG 806

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D SH  +D+IY KL EI  KL RE GYVA T   LH+ +EE+K Q L+ HSE+LA+AYG+
Sbjct: 807 DHSHKHADKIYMKLDEILLKL-REVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGL 865

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +   EG  +RI KNLRVC DCH   KLVS +F RE+V+RD  RFHHF+ G CSC D+W
Sbjct: 866 ITVPEGCTVRIFKNLRVCADCHLVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 181/666 (27%), Positives = 331/666 (49%), Gaps = 17/666 (2%)

Query: 20  QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD-LDCGA 78
            RT  +W   +   V  G           MR  G+ +  F    ++ AC   ++   CGA
Sbjct: 5   HRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGA 64

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
            IH L  K G     +I  +L+ +Y        A++LF  M E+ +VV W +++ A S++
Sbjct: 65  AIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPER-NVVSWTALMVALSSN 123

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G   EALG +R M+R  +  NA  F   +  C     E  G+++ +  + SG   QV VA
Sbjct: 124 GHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVA 183

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG-- 256
           N+LI+M    G++ +A  + Y++E +D+VSWN++++ +    L  K+ + F +++  G  
Sbjct: 184 NSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLL 243

Query: 257 -QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
                 +C++ +V AS    +   G  +H+  ++ G  S + + N L++MY+    +   
Sbjct: 244 RHDATTLCSLISVCASSDYVSY--GSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADA 301

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
             +F+ M+ +D ISW T+I+ Y QN  ++ AL+    +       D M   S L ACS  
Sbjct: 302 EFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSP 361

Query: 376 KCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
             +   + +H   ++  L  +L++ N+++ +YGKC +I+ +  +F+ + + DVVS   +I
Sbjct: 362 GALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILI 421

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK-GKELNGFIIRKGF 493
            SY       +A+++F+ M    V+ + IT+V+ L + +S + L+  G  L+ + I  GF
Sbjct: 422 GSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGF 481

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
             +  V++SL+ MYA+CG L+ +N VF  +  + ++ W +MI AN  HG G+ ++ LF  
Sbjct: 482 LSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMD 541

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRA 612
           M  +    DHI     + + +    + EG +   + ++C    D    + A  +D+ G+ 
Sbjct: 542 MRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAA--MDMYGKC 599

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALL-GACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
             ++E  + +    I P  + W  L+ G  R    KE  E   K ++ +  G   +YV  
Sbjct: 600 GKMDEMLKMLPDPAIRPQ-QCWNTLISGYARYGYFKEAEETF-KHMISV--GRTPDYVTF 655

Query: 672 SNVFAA 677
             + +A
Sbjct: 656 VTLLSA 661



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 194/415 (46%), Gaps = 7/415 (1%)

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN-LLNG 280
           +++   SW + ++G V+      A    R ++  G         + V+A  R       G
Sbjct: 4   DHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACG 63

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
             +HA   K G + ++ IG  L+ +Y     V    R+F++M  ++ +SWT ++   + N
Sbjct: 64  AAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSN 123

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-IL 399
               +AL  +R ++ E +  +     +V+  C  L+      ++  ++I  GL   V + 
Sbjct: 124 GHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVA 183

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN-V 458
           N+++ + G  G +  +  +F  +E +D VSW +++S Y H GL +++  +F  M     +
Sbjct: 184 NSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLL 243

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
             D+ TL S +S  +S   +  G  ++   +R G +    V ++LV+MY+  G L  A  
Sbjct: 244 RHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEF 303

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           +F  +  +DLI W +MI++   +G    A+    ++   +  PD +TF + L ACS  G 
Sbjct: 304 LFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGA 363

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           + +G + +  M     L         L+ + G+ N +E+A    R  Q+ P  +V
Sbjct: 364 LMDG-RMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAE---RIFQLMPNHDV 414


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/781 (35%), Positives = 449/781 (57%), Gaps = 4/781 (0%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D   F  +++ C+  K++D G ++H  V   G++  + +   L+ MYA+C    +A+Q+F
Sbjct: 4   DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           + + E++DV  W  +I  Y   G    ALG+F +MQ   ++    T+VA L AC  +   
Sbjct: 64  EIL-ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             GMEIH   ++ G    V+V  ALI MY +CG +  A     +LE++D VSW +M+   
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 182

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           VQ+D +  A   +R +Q  G  P+++      +A G    L  GK +++    +   SD+
Sbjct: 183 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDV 242

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
           ++ N+ M+M+     +    R+F  M  +D ++W  +I  Y QN    +A+ LF  +Q +
Sbjct: 243 RVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQD 302

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
           G+ A+ +    +L   + L  +++ K IH  +   G   D+V+  A++ +YG+C     +
Sbjct: 303 GIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQA 362

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             +F  + SKDV++WT M  +Y  NG   EAL+LF  M        S TLV+ L   + L
Sbjct: 363 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 422

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           + L+KG++++  II  GF +E  V ++L++MY +CG +  A  VF  +  +D+++W SM+
Sbjct: 423 AALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSML 482

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
            A   HG     + LF +M+ +    D ++F+++L A SHSG + +G ++   M  D+ +
Sbjct: 483 GAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSI 542

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQ-IEPTAEVWCALLGACRVHSNKELGEIVA 654
            P PE Y C+VDLLGRA  ++EA   V  +    P   +W  LLGACR H+  +  +  A
Sbjct: 543 TPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAA 602

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           +++LE DP + G YV++SNV+AA+  W  V ++R  MR  G+KK PG S IEI N++H F
Sbjct: 603 EQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEF 662

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           +  D+SH     IY +L  +  ++ R  GY+  T+ +LH+VE+E K  ML+ HSERLAIA
Sbjct: 663 LEGDRSHPRRHPIYAELDVLNSEM-RAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIA 721

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G++ +  G+ +R+ KNLRVC DCH+  K +S+L GRE++VRD +RFH+F+ G CSC DY
Sbjct: 722 FGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDY 781

Query: 835 W 835
           W
Sbjct: 782 W 782



 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 171/553 (30%), Positives = 289/553 (52%), Gaps = 17/553 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGSV +A+Q+F+ + ++ VF W  M+G Y   G+  R L  + +M+   +     T
Sbjct: 49  MYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVT 108

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++ ACA  + L  G +IHG +L+ G++   F+  +L+ MY KC   R A   F R+ 
Sbjct: 109 YVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL- 167

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  DVV W ++I+A     Q   A  L+R MQ  G+V N  T      A  D  + + G 
Sbjct: 168 EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGK 227

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            I++          V V N+ + M+   G + +A  +   + ++D V+WN ++T +VQN+
Sbjct: 228 FIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNE 287

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +A++ F  LQ  G K + +  V  ++    L +L  GK +H    + G+  D+ +  
Sbjct: 288 NFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVAT 347

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LM +Y +C       ++F  M ++D I+WT +   YAQN    +AL+LF+ +QLEG   
Sbjct: 348 ALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRP 407

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
               + +VL  C+ L  + + ++IH +II  G   ++V+  A++++YGKCG +  +R+VF
Sbjct: 408 TSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVF 467

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  +D++ W SM+ +Y  +G  +E L+LF  M     ++D+++ VS LSA S    + 
Sbjct: 468 EKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVT 527

Query: 480 KGKE-----LNGFIIRKGFNLEGSVASSLVDMYARCG----ALDIANKVFNCVQTKDLIL 530
            G +     L  F I     L G V    VD+  R G    A+DI  K+  C+   D IL
Sbjct: 528 DGYQYFVAMLQDFSITPTPELYGCV----VDLLGRAGRIQEAVDIVLKLSGCL--PDGIL 581

Query: 531 WTSMINANGLHGR 543
           W +++ A   H +
Sbjct: 582 WMTLLGACRTHNK 594



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 167/334 (50%), Gaps = 1/334 (0%)

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           KPD    V  +       N+ +G+ +H +   +GF  +  +   L+ MYA+C  V    +
Sbjct: 2   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF  +  +D  +WT +I  Y Q   + +AL +F  +Q E +    +   ++L AC+  + 
Sbjct: 62  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121

Query: 378 MSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           +    EIHG I+++G   D+ +  A++++Y KCG++  + + F+ +E +DVVSWT+MI++
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 181

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
            V +     A  L+  M    V  + ITL +  +A      L +GK +   +  +    +
Sbjct: 182 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESD 241

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             V +S ++M+   G L  A ++F  +  +D++ W  +I     +     A+ LF +++ 
Sbjct: 242 VRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQ 301

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           +    + ITF+ +L   +    + +GK   E+++
Sbjct: 302 DGIKANDITFVLMLNVYTSLTSLAKGKVIHELVK 335


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 272/674 (40%), Positives = 419/674 (62%), Gaps = 4/674 (0%)

Query: 165 AALQACEDSSFETLGMEIHAATVK-SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN 223
           A LQ+  ++     G ++HA  +  S      Y+   L A YA CG M++A  +   +  
Sbjct: 64  ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL 123

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           K+S  WN M+ G+  N L  K++  +RE+   GQ+ D       + A G L  +  G+ +
Sbjct: 124 KNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRV 183

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           H+  +  G  SD+ +GN+L+ MYAK   +     VF +M  +D  SW T+I+GYA+N   
Sbjct: 184 HSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADS 243

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL--VILNA 401
             A  +F  +   GL AD   +  +L AC+ LK + + K IHGY +R  + +      N+
Sbjct: 244 GTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNS 303

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           ++++Y  C  +  +R +FE +  KD VSW SMI  Y  NG A E+L LF  M       D
Sbjct: 304 LIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPD 363

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
            +T ++ L A   ++ L+ G  ++ ++++KGF+    V ++LVDMY++CG+L  + +VF+
Sbjct: 364 QVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFD 423

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  K L+ W++M+   GLHGRG+ AI +   M+A S  PD+  F ++L ACSH+GL+ E
Sbjct: 424 EMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVE 483

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           GK+    M  +Y + P   HY+C+VDLLGRA HL+EAY  +R+M+I+PT+++W ALL A 
Sbjct: 484 GKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTAS 543

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           R+H N +L EI A+K+ +++P    +Y+ +SN++AA ++W DVE+VR  +R  GLKK+PG
Sbjct: 544 RLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPG 603

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            S+IE+ N +H F+  DKSH ++++IY KL E+ ++L +E GY   T  V ++VEEE K 
Sbjct: 604 CSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQL-KEAGYKPDTSLVFYDVEEEVKE 662

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
           +ML+ HSERLAIA+ ++ +  G++IRITKNLRVC DCH+  KL+S L GRE+++RD +RF
Sbjct: 663 KMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRF 722

Query: 822 HHFEAGVCSCGDYW 835
           HHF  G CSCGDYW
Sbjct: 723 HHFIKGFCSCGDYW 736



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 150/469 (31%), Positives = 247/469 (52%), Gaps = 14/469 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG +  AE +FD +  +  F WN M+  Y SNG P++ L  Y  M   G   D FT+
Sbjct: 105 YAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTY 164

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+KAC  L  ++ G ++H  V+ CG +S  ++ NSL+AMYAK  D   AR +FDRM E
Sbjct: 165 PFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAE 224

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D+  WN++IS Y+ +     A  +F  M + GL  +  T +  L AC D      G  
Sbjct: 225 R-DLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKV 283

Query: 182 IHAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           IH   V++   N   +  N+LI MY  C  M +A  +  ++  KD+VSWNSM+ G+ +N 
Sbjct: 284 IHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNG 343

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              ++++ FR +   G  PDQV  +  + A  ++  L  G  +H+Y +K+GF ++  +G 
Sbjct: 344 DAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGT 403

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  +    RVF +M  +  +SW+ ++AGY  +    +A+ +   ++   +  
Sbjct: 404 ALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIP 463

Query: 361 DVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAIVDVYGKCGNIDYS 415
           D  +  S+L ACS    + + KEI       Y ++  LS     + +VD+ G+ G++D +
Sbjct: 464 DNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSH---YSCMVDLLGRAGHLDEA 520

Query: 416 RNVFESIESKDVVS-WTSMIS-SYVHNG--LANEALELFYLMNEANVES 460
             +  ++E K     W ++++ S +H    LA  + +  + MN   V S
Sbjct: 521 YVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSS 569



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 145/284 (51%), Gaps = 2/284 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  A  +FD++++R + +WN M+  Y  N +       +  M   G+  D  T
Sbjct: 205 MYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTT 264

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRM 119
              ++ ACA LK +  G  IHG  ++    + + F  NSL+ MY  C     AR+LF+R+
Sbjct: 265 LLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERV 324

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K D V WNS+I  Y+ +G   E+L LFR M   G   +  TF+A L AC+  +    G
Sbjct: 325 RWK-DTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYG 383

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           M IH+  VK G +    V  AL+ MY++CG +  +  V  ++ +K  VSW++M+ G+  +
Sbjct: 384 MSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLH 443

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
               +A+     ++     PD     + +SA    G ++ GKE+
Sbjct: 444 GRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEI 487



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 122/238 (51%), Gaps = 5/238 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C  ++DA +LF++V  +   +WN+M+  Y  NG+    L  + RM + G   D  T
Sbjct: 307 MYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVT 366

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC  +  L  G  IH  ++K G+D+   +  +LV MY+KC     +R++FD M 
Sbjct: 367 FIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMP 426

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K  +V W+++++ Y   G+  EA+ +   M+   ++ +   F + L AC  +     G 
Sbjct: 427 DKS-LVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGK 485

Query: 181 EIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
           EI     K   N++  +++   ++ +  R G + EA  ++  +E K +   W ++LT 
Sbjct: 486 EIFYKMEKE-YNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTA 542


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/838 (34%), Positives = 471/838 (56%), Gaps = 31/838 (3%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +YG  G V  + ++F+++  R V +W +++  Y   GEP  V++ Y              
Sbjct: 218  LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY-------------- 263

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
                       KD   G +I G V+K G +S   + NSL++M     +   A  +FD+M 
Sbjct: 264  -----------KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 312

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            E+ D + WNSI +AY+ +G   E+  +F  M+R     N+ T    L        +  G 
Sbjct: 313  ER-DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 371

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             IH   VK G +  V V N L+ MYA  G+  EA  V  Q+  KD +SWNS++  FV + 
Sbjct: 372  GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 431

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                A+     +  +G+  + V   +A++A         G+ LH   +  G   +  IGN
Sbjct: 432  RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 491

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+ MY K   ++   RV  QM  +D ++W  +I GYA++    KAL  F+T+++EG+ +
Sbjct: 492  ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 551

Query: 361  DVMIIGSVLMAC--SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
            + + + SVL AC   G   + + K +H YI+  G  SD  + N+++ +Y KCG++  S++
Sbjct: 552  NYITVVSVLSACLLPG-DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 610

Query: 418  VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            +F  ++++++++W +M+++  H+G   E L+L   M    V  D  +    LSAA+ L++
Sbjct: 611  LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 670

Query: 478  LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
            L++G++L+G  ++ GF  +  + ++  DMY++CG +    K+      + L  W  +I+A
Sbjct: 671  LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 730

Query: 538  NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
             G HG  +     F++M      P H+TF++LL ACSH GL+++G  + +++  D+ L+P
Sbjct: 731  LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 790

Query: 598  WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
              EH  C++DLLGR+  L EA  F+  M ++P   VW +LL +C++H N + G   A+ L
Sbjct: 791  AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 850

Query: 658  LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
             +L+P +   YVL SN+FA + +W+DVE VR +M    +KK    SW+++ +K+ SF   
Sbjct: 851  SKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG 910

Query: 718  DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
            D++H ++ EIY KL +I +KL +E GYVA T   L + +EE+K   L+ HSERLA+AY +
Sbjct: 911  DRTHPQTMEIYAKLEDI-KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 969

Query: 778  LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            + + EGS +RI KNLR+C DCHS  K VSR+ GR +V+RD  RFHHFE G+CSC DYW
Sbjct: 970  MSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 187/681 (27%), Positives = 318/681 (46%), Gaps = 70/681 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G V  A  LFD +  R   +WN M+   V  G  L  +E + +M  LGI   +F 
Sbjct: 116 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 175

Query: 61  FPCVIKAC----AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
              ++ AC    +M ++   G ++HG V K G  S  ++  +++ +Y        +R++F
Sbjct: 176 IASLVTACGRSGSMFRE---GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 232

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           + M ++ +VV W S++  YS  G+  E + ++++                         E
Sbjct: 233 EEMPDR-NVVSWTSLMVGYSDKGEPEEVIDIYKD-------------------------E 266

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +LG +I    VKSG   ++ V N+LI+M    G +  A  +  Q+  +D++SWNS+   +
Sbjct: 267 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 326

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            QN    ++ + F  ++    + +       +S  G + +   G+ +H   +K GF S +
Sbjct: 327 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 386

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + NTL+ MYA          VF QM  +D ISW +++A +  +   L AL L  ++   
Sbjct: 387 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 446

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
           G   + +   S L AC       + + +HG ++  GL  + +I NA+V +YGK G +  S
Sbjct: 447 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 506

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA-SS 474
           R V   +  +DVV+W ++I  Y  +   ++AL  F  M    V S+ IT+VS LSA    
Sbjct: 507 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 566

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
             +L++GK L+ +I+  GF  +  V +SL+ MYA+CG L  +  +FN +  +++I W +M
Sbjct: 567 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAM 626

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-------- 586
           + AN  HG G+  + L  KM +   + D  +F   L A +   ++ EG++          
Sbjct: 627 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 686

Query: 587 ------------------EIMRCDYQLDP-----WPEHYACLVDLLGRANHLEE---AYQ 620
                             EI      L P      P  +  L+  LGR  + EE    + 
Sbjct: 687 EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS-WNILISALGRHGYFEEVCATFH 745

Query: 621 FVRSMQIEPTAEVWCALLGAC 641
            +  M I+P    + +LL AC
Sbjct: 746 EMLEMGIKPGHVTFVSLLTAC 766



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 212/412 (51%), Gaps = 27/412 (6%)

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
           + ET G  +HA  VK    L V   N LI MY + G++  A  +   +  ++ VSWN+M+
Sbjct: 86  TIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMM 145

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGF 292
           +G V+  LY + M+FFR++   G KP      + V+A GR G++   G ++H +  K G 
Sbjct: 146 SGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL 205

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
           +SD+ +   ++ +Y     V+   +VF +M  ++ +SWT+++ GY+      + +++++ 
Sbjct: 206 LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD 265

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGN 411
             L                          ++I G +++ GL S L + N+++ + G  GN
Sbjct: 266 ESL-------------------------GRQIIGQVVKSGLESKLAVENSLISMLGSMGN 300

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           +DY+  +F+ +  +D +SW S+ ++Y  NG   E+  +F LM   + E +S T+ + LS 
Sbjct: 301 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 360

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
              +   K G+ ++G +++ GF+    V ++L+ MYA  G    AN VF  + TKDLI W
Sbjct: 361 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 420

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
            S++ +    GR   A+ L   M +   + +++TF + L AC       +G+
Sbjct: 421 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR 472



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 248/512 (48%), Gaps = 29/512 (5%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G  +H L +K     +    N+L+ MY K    + AR LFD M  + +V  WN+++S   
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVS-WNTMMSGIV 149

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS-SFETLGMEIHAATVKSGQNLQV 195
             G  LE +  FR+M  +G+  +++   + + AC  S S    G+++H    KSG    V
Sbjct: 150 RVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 209

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           YV+ A++ +Y   G ++ +  V  ++ +++ VSW S++ G+                   
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG--------------- 254

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
             +P++V  +    + GR        ++    +K G  S L + N+L+ M      V+Y 
Sbjct: 255 --EPEEVIDIYKDESLGR--------QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 304

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
             +F QM+ +D ISW +I A YAQN    ++  +F  ++    + +   + ++L     +
Sbjct: 305 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 364

Query: 376 KCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
                 + IHG +++ G   +V + N ++ +Y   G    +  VF+ + +KD++SW S++
Sbjct: 365 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 424

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           +S+V++G + +AL L   M  +    + +T  SAL+A  +    +KG+ L+G ++  G  
Sbjct: 425 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF 484

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
               + ++LV MY + G +  + +V   +  +D++ W ++I           A+  F  M
Sbjct: 485 YNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 544

Query: 555 EAESFAPDHITFLALLYACSHSG-LINEGKKF 585
             E  + ++IT +++L AC   G L+  GK  
Sbjct: 545 RVEGVSSNYITVVSVLSACLLPGDLLERGKPL 576


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 291/818 (35%), Positives = 464/818 (56%), Gaps = 44/818 (5%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D  TF  V+ +C+   D+  G  +H  +    ++    + N+L++MY KC     AR +F
Sbjct: 6   DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65

Query: 117 DRMGEKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           + M  ++ +VV WN++I+AY+ +G   EAL L+  M   GL T+  TFV+ L AC   S 
Sbjct: 66  ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SS 122

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G EIH     SG +    +ANAL+ MYAR G + +A  +   L+ +D  SWN+++  
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
             Q+  +  A++ F+E++    KP+    +N +S       L  G+++HA  +  GF +D
Sbjct: 183 HSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTD 241

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           L +   L++MY KC   +    VF +M  +D +SW  +I  Y  N    +ALEL++ + +
Sbjct: 242 LVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDM 301

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
           EG         S+L ACS +K ++Q + +H +I+ +GL S++ +  A+V++Y KCG+++ 
Sbjct: 302 EGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEE 361

Query: 415 SRNVFESIE----------------------------------SKDVVSWTSMISSYVHN 440
           +R VF +++                                  S+D +SW +MI++YV N
Sbjct: 362 ARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQN 421

Query: 441 GLANEALELFYLMN-EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           G A  A+++F  M   A ++ D++T ++ L A +SL  L + K L+  I          V
Sbjct: 422 GCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVV 481

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            ++L++MYARCG+L+ A ++F   + K ++ WT+M+ A   +GR   A+DLF +M+ E  
Sbjct: 482 TNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGV 541

Query: 560 APDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAY 619
            PD +T+ ++L+ C+H G + +G ++   M   + L P  +H+A +VDLLGR+  L +A 
Sbjct: 542 KPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAK 601

Query: 620 QFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASR 679
           + + SM  EP    W   L ACR+H   ELGE  A+++ ELDP +   Y+ +SN++AA  
Sbjct: 602 ELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHG 661

Query: 680 KWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLE 739
            W+ V  VR +M   GLKK PG S+IE+  K+H F +  K H  +DEI ++L  +   L 
Sbjct: 662 MWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRL-HGLM 720

Query: 740 REGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKST-EGSLIRITKNLRVCVDC 798
           R  GYV  T+ VLH+V E EK  ML  HSE++AIA+G++ S   G  IR+ KNLRVC DC
Sbjct: 721 RAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDC 780

Query: 799 HSFCKLVSRLFGRELVVRDANRFHHFEA-GVCSCGDYW 835
           H+  K ++R+ GR+++VRD NRFH F + G CSCGDYW
Sbjct: 781 HTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 178/604 (29%), Positives = 306/604 (50%), Gaps = 48/604 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVS--QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MYGKC S++DA  +F+ +   QR V +WNAM+ AY  NG     L  Y RM + G+  D 
Sbjct: 51  MYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDH 110

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            TF  V+ AC+ L     G +IH  V   G DS   + N+LV MYA+      A+++F  
Sbjct: 111 VTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQS 167

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           + +  D   WN++I A+S SG    AL +F+EM +  +  N+ T++  +           
Sbjct: 168 L-QTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPE 225

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G +IHA  V +G +  + VA ALI MY +CG   EA  V  +++ +D VSWN M+  +V 
Sbjct: 226 GRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVL 285

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N  + +A++ +++L   G K  +   V+ + A   +  L  G+ +H++ +++G  S++ +
Sbjct: 286 NGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAV 345

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA-------------------- 338
              L++MYAKC  +    +VF  M  +D ++W+T+I  YA                    
Sbjct: 346 ATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGS 405

Query: 339 --------------QNNCHLKALELFRTVQ-LEGLDADVMIIGSVLMACSGLKCMSQTKE 383
                         QN C + A+++FR +    GL  D +   +VL AC+ L  +S+ K 
Sbjct: 406 RDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKA 465

Query: 384 IHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           +H  I    L S++V+ N ++++Y +CG+++ +  +F + + K VVSWT+M++++   G 
Sbjct: 466 LHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGR 525

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVAS 501
             EAL+LF  M+   V+ D +T  S L   +    L++G +                  +
Sbjct: 526 YAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFA 585

Query: 502 SLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR---GKVAIDLFYKMEAE 557
           ++VD+  R G L  A ++   +    D + W + + A  +HG+   G+ A +  Y+++  
Sbjct: 586 AMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPS 645

Query: 558 SFAP 561
           S AP
Sbjct: 646 STAP 649



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 211/387 (54%), Gaps = 9/387 (2%)

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
           ++PD V  +  + +    G+++ G+ LH       F  D  +GN L+ MY KC  +    
Sbjct: 3   RQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDAR 62

Query: 317 RVFYQMT--AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
            VF  M    ++ +SW  +IA YAQN    +AL L+  + L+GL  D +   SVL ACS 
Sbjct: 63  SVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS 122

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L   +Q +EIH  +   GL     L NA+V +Y + G++  ++ +F+S++++D  SW ++
Sbjct: 123 L---AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I ++  +G  + AL +F  M + +V+ +S T ++ +S  S+  +L +G++++  I+  GF
Sbjct: 180 ILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
           + +  VA++L++MY +CG+   A +VF+ ++ +D++ W  MI    L+G    A++L+ K
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQK 298

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           ++ E F     TF+++L ACS    + +G + +     +  LD        LV++  +  
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGA 640
            LEEA +   +M+    A  W  L+GA
Sbjct: 358 SLEEARKVFNAMK-NRDAVAWSTLIGA 383


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 304/837 (36%), Positives = 461/837 (55%), Gaps = 31/837 (3%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y K G + +A  LFD ++ R V  WN M+ AYV        +  +S     G   D  T
Sbjct: 804  IYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVT 863

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + +                 V+KC         N L     K Y    A +LF    
Sbjct: 864  LRTLSR-----------------VVKCKK-------NILELKQFKAY----ATKLFMYDD 895

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  DV++WN  +S +   G+  EA+  F +M    +  +  TFV  L      +   LG 
Sbjct: 896  DGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGK 955

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +IH   ++SG +  V V N LI MY + G ++ A  V  Q+   D +SWN+M++G   + 
Sbjct: 956  QIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSG 1015

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL-GNLLNGKELHAYAIKQGFVSDLQIG 299
            L   ++  F  L      PDQ    + + A   L G      ++HA A+K G V D  + 
Sbjct: 1016 LEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVS 1075

Query: 300  NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
              L+D+Y+K   +     +F      D  SW  I+ GY  +    KAL L+  +Q  G  
Sbjct: 1076 TALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGER 1135

Query: 360  ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            +D + + +   A  GL  + Q K+IH  ++++G + DL + + ++D+Y KCG ++ +R V
Sbjct: 1136 SDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRV 1195

Query: 419  FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
            F  I S D V+WT+MIS  V NG    AL  ++ M  + V+ D  T  + + A S L+ L
Sbjct: 1196 FSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTAL 1255

Query: 479  KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            ++G++++  I++     +  V +SLVDMYA+CG ++ A  +F    T+ +  W +MI   
Sbjct: 1256 EQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGL 1315

Query: 539  GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
              HG  K A+  F  M++    PD +TF+ +L ACSHSGL++E  +    M+ +Y ++P 
Sbjct: 1316 AQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPE 1375

Query: 599  PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
             EHY+CLVD L RA  +EEA + + SM  E +A ++  LL ACRV  ++E G+ VA+KLL
Sbjct: 1376 IEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLL 1435

Query: 659  ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
             L+P +   YVL+SNV+AA+ +W++V   R  MR   +KK PG SW+++ NK+H F+A D
Sbjct: 1436 ALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGD 1495

Query: 719  KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            +SH E+D IY K+  I +++ RE GYV  T F L +VEEE+K   LY HSE+LAIAYG++
Sbjct: 1496 RSHEETDVIYNKVEYIMKRI-REEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLM 1554

Query: 779  KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            K+   + +R+ KNLRVC DCHS  K +S++F RE+V+RDANRFHHF  G+CSCGDYW
Sbjct: 1555 KTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 193/657 (29%), Positives = 319/657 (48%), Gaps = 47/657 (7%)

Query: 1    MYGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRV-LETYSRMRVLGISVD 57
            MY KCGS+  A +LFD    + R + TWNA+L A  ++ +        +  +R   +S  
Sbjct: 700  MYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTT 759

Query: 58   AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              T   V K C +         +HG  +K G     F+  +LV +YAK    R+AR LFD
Sbjct: 760  RHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFD 819

Query: 118  RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
             M  + DVVLWN ++ AY  +    EA+ LF E  R G               +D +  T
Sbjct: 820  GMAVR-DVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRP------------DDVTLRT 866

Query: 178  LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            L     +  VK  +N+       L    A   K+      +Y  +  D + WN  L+ F+
Sbjct: 867  L-----SRVVKCKKNIL-----ELKQFKAYATKL-----FMYDDDGSDVIVWNKALSRFL 911

Query: 238  QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            Q     +A+  F ++  +    D +  V  ++    L  L  GK++H   ++ G    + 
Sbjct: 912  QRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVS 971

Query: 298  IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE-----LFRT 352
            +GN L++MY K   V+    VF QM   D ISW T+I+G     C L  LE     +F  
Sbjct: 972  VGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISG-----CTLSGLEECSVGMFVH 1026

Query: 353  VQLEGLDADVMIIGSVLMACSGLK-CMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCG 410
            +  + L  D   + SVL ACS L+       +IH   ++ G+  D  +  A++DVY K G
Sbjct: 1027 LLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRG 1086

Query: 411  NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
             ++ +  +F + +  D+ SW +++  Y+ +G   +AL L+ LM E+   SD ITLV+A  
Sbjct: 1087 KMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAK 1146

Query: 471  AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
            AA  L  LK+GK+++  ++++GFNL+  V S ++DMY +CG ++ A +VF+ + + D + 
Sbjct: 1147 AAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVA 1206

Query: 531  WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIM 589
            WT+MI+    +G+ + A+  +++M      PD  TF  L+ ACS    + +G++    I+
Sbjct: 1207 WTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIV 1266

Query: 590  RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
            + +   DP+      LVD+  +  ++E+A    +       A  W A++     H N
Sbjct: 1267 KLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTRRIAS-WNAMIVGLAQHGN 1320



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 155/620 (25%), Positives = 279/620 (45%), Gaps = 36/620 (5%)

Query: 64   VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE-K 122
            +++      DL  G + H  +L  G+    F+ N+L+ MYAKC     AR+LFD   +  
Sbjct: 662  ILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTN 721

Query: 123  EDVVLWNSIISAYSA-SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D+V WN+I+SA +A + +  +   LFR ++R  + T  +T     + C  S+  +    
Sbjct: 722  RDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASES 781

Query: 182  IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            +H   VK G    V+VA AL+ +YA+ G + EA  +   +  +D V WN M+  +V   L
Sbjct: 782  LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCL 841

Query: 242  YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
              +AM  F E    G +PD V             N+L  K+  AYA K            
Sbjct: 842  EYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKL----------- 890

Query: 302  LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
                              Y     D I W   ++ + Q     +A++ F  +    +  D
Sbjct: 891  ----------------FMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACD 934

Query: 362  VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFE 420
             +    +L   +GL C+   K+IHG ++R GL  +V + N ++++Y K G++  +R+VF 
Sbjct: 935  GLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFG 994

Query: 421  SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS-ILK 479
             +   D++SW +MIS    +GL   ++ +F  +   ++  D  T+ S L A SSL     
Sbjct: 995  QMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYY 1054

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
               +++   ++ G  L+  V+++L+D+Y++ G ++ A  +F      DL  W ++++   
Sbjct: 1055 LATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYI 1114

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPW 598
            + G    A+ L+  M+      D IT +    A      + +GK+    +++  + LD +
Sbjct: 1115 VSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLF 1174

Query: 599  PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
                + ++D+  +   +E A + V S    P    W  ++  C V + +E   +     +
Sbjct: 1175 VT--SGVLDMYLKCGEMESARR-VFSEIPSPDDVAWTTMISGC-VENGQEEHALFTYHQM 1230

Query: 659  ELDPGNPGNYVLISNVFAAS 678
             L    P  Y   + V A S
Sbjct: 1231 RLSKVQPDEYTFATLVKACS 1250



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 14/212 (6%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE-- 423
           S+L        +S  K  H  I+  G   D  + N ++ +Y KCG++  +R +F++    
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 424 SKDVVSWTSMISSYV-HNGLANEALELFYLMNEANVESDSITLVSA-----LSAASSLSI 477
           ++D+V+W +++S+   H   +++   LF L+  + V +   TL        LSA+ S S 
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSAS- 779

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
               + L+G+ ++ G   +  VA +LV++YA+ G +  A  +F+ +  +D++LW  M+ A
Sbjct: 780 ----ESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKA 835

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
                    A+ LF +     F PD +T   L
Sbjct: 836 YVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTL 867


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 302/830 (36%), Positives = 470/830 (56%), Gaps = 13/830 (1%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFTFPCVIKACA 69
           A Q FD++  R   T +  L  +   G   + L+ +  + R  G  V       V+K C 
Sbjct: 57  ARQAFDEIPHRN--TLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW 128
            + D   G ++HGL ++CG+D  D  V  SLV MY K +     R++F+ M  K +VV W
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAM-PKRNVVTW 173

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
            S+++ Y   G   + + LF  M+  G+  N+ TF + L          LG  +HA +VK
Sbjct: 174 TSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVK 233

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            G    V+V N+L+ MYA+CG + EA  V   +E +D VSWN+++ G V N    +A+Q 
Sbjct: 234 FGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQL 293

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           F + + +     Q      +     +  L   ++LH+  +K+GF S   +   LMD Y+K
Sbjct: 294 FHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSK 353

Query: 309 CCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
              +     +F  M+ +Q+ +SWT +I G  QN     A  LF  ++ +G+  +     +
Sbjct: 354 AGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYST 413

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L A       S   +IH  +I+       I+  A++  Y K  N + + ++F+ I+ KD
Sbjct: 414 ILTA----SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKD 469

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILKKGKELN 485
           VVSW++M++ Y   G ++ A  +F  M    ++ +  T+ S + A AS  + +  G++ +
Sbjct: 470 VVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFH 529

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
              I+   +    V+S+LV MYAR G+++ A  +F     +DL+ W SM++    HG  +
Sbjct: 530 AISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQ 589

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A+D+F +MEAE    D +TFL+++  C+H+GL+ EG+++ + M  DY + P  EHYAC+
Sbjct: 590 KALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACM 649

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           VDL  RA  L+EA   +  M       VW  LLGAC+VH N ELG++ A+KLL L+P + 
Sbjct: 650 VDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDS 709

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
             YVL+SN+++A+ KWK+ ++VR  M    +KK  G SWI+I NK+HSFIA DKSH  S+
Sbjct: 710 ATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSE 769

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
           +IY KL  +T KL++E GY   T F LH V EE+K  ML  HSERLA+A+G++ +  G+ 
Sbjct: 770 QIYAKLRAMTTKLKQE-GYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAP 828

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + I KNLRVC DCH+  K+VS++  RE+V+RD +RFHHF +GVCSCGD+W
Sbjct: 829 LHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 283/564 (50%), Gaps = 13/564 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K  SV+D  ++F+ + +R V TW ++L  Y+ +G    V+E + RMR  G+  ++ T
Sbjct: 148 MYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVT 207

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+   A    +D G ++H   +K G  ST F+ NSL+ MYAKC    +AR +F  M 
Sbjct: 208 FASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGM- 266

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  D+V WN++++    +G  LEAL LF + +    +    T+   ++ C +     L  
Sbjct: 267 ETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLAR 326

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQN 239
           ++H++ +K G +    V  AL+  Y++ G++  A  +   +  +++ VSW +M+ G +QN
Sbjct: 327 QLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQN 386

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A   F  ++  G  P+       ++AS  + +L    ++HA  IK  +     +G
Sbjct: 387 GDVPLAAALFSRMREDGVAPNDFTYSTILTAS--VASL--PPQIHAQVIKTNYECTSIVG 442

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+  Y+K C       +F  +  +D +SW+ ++  YAQ      A  +F  + + GL 
Sbjct: 443 TALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLK 502

Query: 360 ADVMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRN 417
            +   I SV+ AC S    +   ++ H   I+    D L + +A+V +Y + G+I+ ++ 
Sbjct: 503 PNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQC 562

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +FE    +D+VSW SM+S Y  +G + +AL++F  M    +E D +T +S +   +   +
Sbjct: 563 IFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGL 622

Query: 478 LKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMI 535
           +++G+     + R  G        + +VD+Y+R G LD A  +   +      ++W +++
Sbjct: 623 VEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLL 682

Query: 536 NANGLHGR---GKVAIDLFYKMEA 556
            A  +H     GK+A +    +E 
Sbjct: 683 GACKVHKNVELGKLAAEKLLSLEP 706



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 237/479 (49%), Gaps = 11/479 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V +A  +F  +  R + +WN ++   V NG  L  L+ +   R     +   T
Sbjct: 249 MYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQST 308

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  VIK CA +K L    ++H  VLK G+ S   ++ +L+  Y+K      A  +F  M 
Sbjct: 309 YATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMS 368

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             ++VV W ++I+    +G    A  LF  M+  G+  N +T+   L A    S  +L  
Sbjct: 369 GSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA----SVASLPP 424

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  +K+       V  AL+A Y++     EA  +   ++ KD VSW++MLT + Q  
Sbjct: 425 QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAG 484

Query: 241 LYCKAMQFFRELQGAGQKPDQ--VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
               A   F ++   G KP++  + +V    AS   G  L G++ HA +IK      L +
Sbjct: 485 DSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDL-GRQFHAISIKHRCHDALCV 543

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            + L+ MYA+   +     +F + T +D +SW ++++GYAQ+    KAL++FR ++ EG+
Sbjct: 544 SSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGI 603

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILNA-IVDVYGKCGNIDYSR 416
           + D +   SV+M C+    + + +     + R  G++  +   A +VD+Y + G +D + 
Sbjct: 604 EMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAM 663

Query: 417 NVFE--SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           ++ E  S  +  +V  T + +  VH  +    L    L++    +S +  L+S + +A+
Sbjct: 664 SLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAA 722


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 295/838 (35%), Positives = 473/838 (56%), Gaps = 5/838 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YG  G VL+A++LF ++ QR V +W A++ A  SNG     L  Y RMR  G+  +A  
Sbjct: 88  LYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANA 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+  C  L+D   G ++   V+  G  +   + NSL+ M+      + A +LFDRM 
Sbjct: 148 LATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRM- 206

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D + WN++IS YS      +   +  +M+   +  +  T  + +  C  S    LG 
Sbjct: 207 EERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGS 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH+  V SG +  V + NAL+ MY+  GK+ EA  +   +  +D +SWN+M++ +VQ++
Sbjct: 267 GIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSN 326

Query: 241 LYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +A++   +L Q     P+ +   +A+ A      L+NG+ +HA  +++   + L IG
Sbjct: 327 SCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIG 386

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+ MY+KC  +    RVF  M   D +S   +  GYA       A+ +F  ++  G+ 
Sbjct: 387 NSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIK 446

Query: 360 ADVMIIGSVLMACSGLKCM-SQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
            + + + ++   C  L  + S    +H Y+ + GL SD  I N+++ +Y  CG+++ S  
Sbjct: 447 PNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTG 506

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  I +K V+SW ++I++ V +G   EA++LF     A  + D   L   LS++++L+ 
Sbjct: 507 IFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLAS 566

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L++G +L+G  ++ G + +  V ++ +DMY +CG +D   K       +    W ++I+ 
Sbjct: 567 LEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISG 626

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              +G  K A D F  M +    PD++TF+ALL ACSH+GLI++G  +   M   + + P
Sbjct: 627 YARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSP 686

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             +H  C+VDLLGR     EA +F+  M + P   +W +LL + R H N ++G   AK L
Sbjct: 687 GIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNL 746

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           LELDP +   YVL+SN++A + +W DV+++R  M+   L K P  SW+++ N++ +F   
Sbjct: 747 LELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIG 806

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D+SH  +++IY KL EI  KL RE GYVA T   LH+ +EE+K   L+ HSE+LA+AYG+
Sbjct: 807 DRSHMHAEKIYVKLDEILLKL-REVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGL 865

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L   EGS IRI KNLRVC DCH   KLVS +F RE+V+RD  RFH F+ G CSC D+W
Sbjct: 866 LVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 172/665 (25%), Positives = 309/665 (46%), Gaps = 44/665 (6%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKAC---AMLKDL 74
           +  RT  +W   +      G           MR   + +  F    ++ AC      +  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 75  DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
            CGA IH L  + G     +I  +L+ +Y        A++LF  M ++ +VV W +I+ A
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQR-NVVSWTAIMVA 119

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
            S++G   EAL  +R M++ G++ NA      +  C     E  G+++ A  V SG    
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V VAN+LI M+    ++ +A  +  ++E +D +SWN+M++ +   ++Y K      +++ 
Sbjct: 180 VSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH 239

Query: 255 AGQKPD--QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
              KPD   +C++ +V AS  L  L  G  +H+  +  G    + + N L++MY+    +
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVAL--GSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE-LFRTVQLEGLDADVMIIGSVLMA 371
           +    +F  M+ +D ISW T+I+ Y Q+N  ++ALE L + +Q +    + M   S L A
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 372 CSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           CS  + +   + IH  I+++ L + L+I N+++ +Y KC +++ +  VFES+   DVVS 
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC 417

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK-GKELNGFII 489
             +   Y        A+ +F  M    ++ + IT+++      SL  L   G  L+ ++ 
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVT 477

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           + G   +  + +SL+ MYA CG L+ +  +F+ +  K +I W ++I AN  HGRG+ AI 
Sbjct: 478 QTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIK 537

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI--------------------- 588
           LF   +      D       L + ++   + EG +   +                     
Sbjct: 538 LFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYG 597

Query: 589 ----MRCDYQLDPWPEH-----YACLVDLLGRANHLEEA---YQFVRSMQIEPTAEVWCA 636
               M C  +  P P H     +  L+    R  + +EA   ++ + S+  +P    + A
Sbjct: 598 KCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVA 657

Query: 637 LLGAC 641
           LL AC
Sbjct: 658 LLSAC 662


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/779 (37%), Positives = 468/779 (60%), Gaps = 12/779 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V ++C    +++   ++H L+L  G      ++  LV +YA   D   +   F  + 
Sbjct: 54  FNLVFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHI- 109

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLG 179
           +++++  WNS++SAY   G+  +++    E+  + G+  + YTF   L+AC   +    G
Sbjct: 110 QRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---G 166

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H   +K G    VYVA +LI +Y+R G +  A  V   +  +D  SWN+M++GF QN
Sbjct: 167 EKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQN 226

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A++    ++    K D V   + +    +  +++ G  +H Y IK G  SD+ + 
Sbjct: 227 GNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVS 286

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L++MY+K   +    RVF  M  +D +SW +IIA Y QN+  + AL  F+ +   G+ 
Sbjct: 287 NALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMR 346

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLS-DLVILNAIVDVYGKCGNIDYSRN 417
            D++ + S+      L      + +HG+++R + L  D+VI NA+V++Y K G+ID +R 
Sbjct: 347 PDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARA 406

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA-NVESDSITLVSALSAASSLS 476
           VFE + S+DV+SW ++I+ Y  NGLA+EA++ + +M E   +  +  T VS L A S + 
Sbjct: 407 VFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVG 466

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L++G +++G +I+    L+  VA+ L+DMY +CG L+ A  +F  +  +  + W ++I+
Sbjct: 467 ALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIIS 526

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           + G+HG G+ A+ LF  M A+    DHITF++LL ACSHSGL++E +   + M+ +Y++ 
Sbjct: 527 SLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIK 586

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  +HY C+VDL GRA +LE+AY  V +M I+  A +W  LL ACR+H N ELG   + +
Sbjct: 587 PNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDR 646

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           LLE+D  N G YVL+SN++A   KW+   +VR   R  GL+KTPG S + +G+ +  F A
Sbjct: 647 LLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYA 706

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            ++SH +  EIY++L  +  K+ +  GYV    FVL +VEE+EK ++L  HSERLAI +G
Sbjct: 707 GNQSHPQCAEIYEELRVLNAKM-KSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFG 765

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ +   S IRI KNLRVC DCH+  K +S++  RE++VRD+NRFHHF+ G+CSCGDYW
Sbjct: 766 IISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 177/583 (30%), Positives = 315/583 (54%), Gaps = 19/583 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           +Y   G +  +   F  + ++ +F+WN+M+ AYV  G     ++  + +  L G+  D +
Sbjct: 92  LYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFY 151

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP V+KAC  L D   G K+H  VLK G++   ++  SL+ +Y++      A ++F  M
Sbjct: 152 TFPPVLKACLSLAD---GEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDM 208

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + DV  WN++IS +  +G   EAL +   M+   +  +  T  + L  C  S+    G
Sbjct: 209 PVR-DVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGG 267

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           + +H   +K G    V+V+NALI MY++ G++ +A  V   +E +D VSWNS++  + QN
Sbjct: 268 VLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQN 327

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS-DLQI 298
           D    A+ FF+E+   G +PD +  V+  S  G+L +   G+ +H + ++  ++  D+ I
Sbjct: 328 DDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVI 387

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG- 357
           GN L++MYAK   ++    VF Q+ ++D ISW T+I GYAQN    +A++ +  ++ EG 
Sbjct: 388 GNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMME-EGR 446

Query: 358 -LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
            +  +     S+L A S +  + Q  +IHG +I+  L  D+ +   ++D+YGKCG ++ +
Sbjct: 447 TIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDA 506

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
            ++F  I  +  V W ++ISS   +G   +AL+LF  M    V++D IT VS LSA S  
Sbjct: 507 MSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHS 566

Query: 476 SILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQTKDLILWT 532
            ++ + +      ++K + ++ ++     +VD++ R G L+ A N V N     D  +W 
Sbjct: 567 GLVDEAQWCFD-TMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWG 625

Query: 533 SMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +++ A  +HG    G  A D   ++++E+    +   L+ +YA
Sbjct: 626 TLLAACRIHGNAELGTFASDRLLEVDSENVG--YYVLLSNIYA 666


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 296/830 (35%), Positives = 479/830 (57%), Gaps = 11/830 (1%)

Query: 11  AEQLFDKVSQR--TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKAC 68
           A  LFDK+  R  T+   N +L +Y  + +    L  +  +    +  D  T  CV   C
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW 128
           A   D   G ++H   +K G      +  SLV MY K  +    R++FD MGE+ +VV W
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGER-NVVSW 162

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
            S+++ YS +G       LF +MQ  G++ N YT    + A  +     +G+++HA  VK
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            G    + V N+LI++Y+R G + +A  V  ++E +D V+WNSM+ G+V+N    +  + 
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           F ++Q AG KP  +   + + +   L  L   K +   A+K GF +D  +   LM   +K
Sbjct: 283 FNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSK 342

Query: 309 CCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
           C  ++    +F  M   ++ +SWT +I+G  QN  + +A+ LF  ++ EG+  +     +
Sbjct: 343 CKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSA 402

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L     +       E+H  +I+        +  A++D Y K GN   +  VFE IE+KD
Sbjct: 403 ILTVHYPVF----VSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKD 458

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILKKGKELN 485
           +++W++M++ Y   G   EA +LF+ + +  ++ +  T  S ++A AS  +  ++GK+ +
Sbjct: 459 LMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFH 518

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
            + I+   N    V+S+LV MYA+ G +D A++VF   + +DL+ W SMI+    HG+ K
Sbjct: 519 AYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAK 578

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A+++F +M+  +   D +TF+ ++ AC+H+GL+ +G+K+   M  D+ ++P  +HY+C+
Sbjct: 579 KALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCM 638

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           +DL  RA  LE+A   +  M   P A VW  LLGA RVH N ELGE+ A+KL+ L P + 
Sbjct: 639 IDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDS 698

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
             YVL+SN++AA+  W++   VR  M    +KK PG SWIE+ NK +SF+A D +H  S+
Sbjct: 699 AAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSN 758

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
           +IY KL+E++ +L ++ GY   T+ V H++E+E+K  +L  HSERLAIA+G++ +     
Sbjct: 759 QIYSKLSELSIRL-KDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIP 817

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           I+I KNLRVC DCH+F KLVS +  R +VVRD+NRFHHF+ G+CSCGDYW
Sbjct: 818 IQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 173/582 (29%), Positives = 301/582 (51%), Gaps = 15/582 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K  +V D  ++FD++ +R V +W ++L  Y  NG    V E + +M+  G+  + +T
Sbjct: 137 MYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYT 196

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI A      +  G ++H +V+K G++    + NSL+++Y++    R AR +FD+M 
Sbjct: 197 VSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKM- 255

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  D V WNS+I+ Y  +GQ LE   +F +MQ  G+     TF + +++C       L  
Sbjct: 256 EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVK 315

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLTGFVQN 239
            +    +KSG      V  AL+   ++C +M +A  +   +E  K+ VSW +M++G +QN
Sbjct: 316 LMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQN 375

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  F +++  G KP+        SA   +   +   E+HA  IK  +     +G
Sbjct: 376 GGNDQAVNLFSQMRREGVKPNHF----TYSAILTVHYPVFVSEMHAEVIKTNYERSSSVG 431

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+D Y K        +VF  + A+D ++W+ ++AGYAQ     +A +LF  +  EG+ 
Sbjct: 432 TALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIK 491

Query: 360 ADVMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRN 417
            +     SV+ AC S      Q K+ H Y I+  L++ L + +A+V +Y K GNID +  
Sbjct: 492 PNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHE 551

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+  + +D+VSW SMIS Y  +G A +ALE+F  M + N++ D++T +  ++A +   +
Sbjct: 552 VFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGL 611

Query: 478 LKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMI 535
           ++KG K  N  I     N      S ++D+Y+R G L+ A  + N +       +W +++
Sbjct: 612 VEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLL 671

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A  +H     G++A +    ++ E  A      L+ +YA +
Sbjct: 672 GAARVHRNVELGELAAEKLISLQPEDSAA--YVLLSNMYAAA 711


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 294/837 (35%), Positives = 472/837 (56%), Gaps = 31/837 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K   + +A  LFD++  R V  WN M+ AYV  G    VL  +S     G+  D   
Sbjct: 166 IYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD--- 222

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
                  C  ++ +     + G+  K  ++     V +       C D            
Sbjct: 223 -------CVSVRTI-----LMGVGKKTVFERELEQVRAYATKLFVCDD------------ 258

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              DV +WN  +S+Y  +G+  EA+  FR+M +  +  ++ T++  L      +   LG 
Sbjct: 259 -DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGK 317

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH A V+ G +  V VAN+ I MY + G +  A  +  Q++  D +SWN++++G  ++ 
Sbjct: 318 QIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSG 377

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG-NLLNGKELHAYAIKQGFVSDLQIG 299
           L   +++ F +L  +G  PDQ    + + A   L  +   G+++H  A+K G V D  + 
Sbjct: 378 LEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVS 437

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+D+Y+K   +     +F+     D  SW  ++ G+  ++ + +AL LF  +   G  
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
           AD +   +   A   L  + Q K+IH  +I+     DL +++ I+D+Y KCG +  +R V
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  I S D V+WT++IS  V NG   +AL  ++ M  A V+ D  T  + + A S L+ L
Sbjct: 558 FNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTAL 617

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           ++GK+++  I++     +  V +SLVDMYA+CG ++ A  +F  + T+ + LW +MI   
Sbjct: 618 EQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGL 677

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             HG  + A++ F +M++    PD +TF+ +L ACSHSGL ++  K  + M+  Y ++P 
Sbjct: 678 AQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPE 737

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY+CLVD L RA H++EA + V SM  E +A ++  LL ACRV  +KE GE VA+KL 
Sbjct: 738 IEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLF 797

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
            +DP +   YVL+SN++AA+ +W++    R  M+   +KK PG SWI++ NK+H F+A D
Sbjct: 798 TMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGD 857

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           +SH E+D IY K+  + ++++ E GYV  T+F L ++EEE+K   L  HSE+LAIAYG++
Sbjct: 858 RSHEETDLIYNKVEYVMKRIKEE-GYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLM 916

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           K+   + +R+ KNLRVC DCH+  K +S +F RE+V+RDANRFHHF +G+CSCGDYW
Sbjct: 917 KTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 201/663 (30%), Positives = 325/663 (49%), Gaps = 50/663 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQ--RTVFTWNAMLGAYVSNGEPLRVLETYSRM---RVLGIS 55
           MY KCGS+  A +LFD   Q  R + T+NA+L AY   GE   V +T+      R+L  S
Sbjct: 57  MYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQS 116

Query: 56  V---DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           V      T   + K C +         + G  +K G     F+  +LV +YAK    R+A
Sbjct: 117 VMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREA 176

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           R LFDRM  + DVVLWN ++ AY   G   E LGLF    R GL  +             
Sbjct: 177 RVLFDRMPVR-DVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCV----------- 224

Query: 173 SSFETLGMEIHAATV--KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
            S  T+ M +   TV  +  + ++ Y     +     C             ++ D   WN
Sbjct: 225 -SVRTILMGVGKKTVFERELEQVRAYATKLFV-----CD------------DDSDVTVWN 266

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
             L+ ++Q     +A+  FR++  +    D +  +  +S    L +L  GK++H   ++ 
Sbjct: 267 KTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRF 326

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G+   + + N+ ++MY K   VNY  R+F QM   D ISW T+I+G A++     +L LF
Sbjct: 327 GWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLF 386

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLK---CMSQTKEIHGYIIRKGLS-DLVILNAIVDVY 406
             +   GL  D   I SVL ACS L+   C+   +++H   ++ G+  D  +  A++DVY
Sbjct: 387 IDLLRSGLLPDQFTITSVLRACSSLEESYCVG--RQVHTCALKAGIVLDSFVSTALIDVY 444

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            K G ++ +  +F + +  D+ SW +M+  +  +    EAL LF LM+E   ++D IT  
Sbjct: 445 SKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFA 504

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           +A  AA  L  L++GK+++  +I+  F+ +  V S ++DMY +CG +  A KVFN + + 
Sbjct: 505 NAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSP 564

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF- 585
           D + WT++I+    +G  + A+  +++M      PD  TF  L+ ACS    + +GK+  
Sbjct: 565 DDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIH 624

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
             IM+ +   DP+      LVD+  +  ++E+AY   R M     A +W A++     H 
Sbjct: 625 ANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTRSVA-LWNAMIVGLAQHG 681

Query: 646 NKE 648
           N E
Sbjct: 682 NAE 684



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/618 (23%), Positives = 277/618 (44%), Gaps = 45/618 (7%)

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-DVVLWNSI 131
           DL  G + H +++  G +   ++ N+L+ MYAKC     AR+LFD   + + D+V +N+I
Sbjct: 28  DLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAI 87

Query: 132 ISAYSASGQ------CLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           ++AY+ +G+        EA  +FR +++  ++T  +T     + C      +    +   
Sbjct: 88  LAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGY 147

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
            VK G    V+VA AL+ +YA+  ++ EA  +  ++  +D V WN M+  +V+     + 
Sbjct: 148 AVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEV 207

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           +  F     +G +PD V     +   G+               K  F  +L+        
Sbjct: 208 LGLFSAFHRSGLRPDCVSVRTILMGVGK---------------KTVFERELEQVRA---- 248

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
                   Y  ++F      D   W   ++ Y Q     +A++ FR +    +  D +  
Sbjct: 249 --------YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTY 300

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIES 424
             +L   + L  +   K+IHG ++R G    V + N+ +++Y K G+++Y+R +F  ++ 
Sbjct: 301 IVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKE 360

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL-SILKKGKE 483
            D++SW ++IS    +GL   +L LF  +  + +  D  T+ S L A SSL      G++
Sbjct: 361 VDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQ 420

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++   ++ G  L+  V+++L+D+Y++ G ++ A  +F+     DL  W +M++   +   
Sbjct: 421 VHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDN 480

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI---MRCDYQLDPWPE 600
            + A+ LF  M       D ITF     A      + +GK+   +   MR  Y L     
Sbjct: 481 YREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFV--- 537

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
             + ++D+  +   ++ A +    +   P    W  ++  C V + +E   +     + L
Sbjct: 538 -ISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGC-VENGEEEQALFTYHQMRL 594

Query: 661 DPGNPGNYVLISNVFAAS 678
               P  Y   + V A S
Sbjct: 595 AGVQPDEYTFATLVKACS 612



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT- 525
           S L  A + S L  GK  +  I+  G N +  V ++L+ MYA+CG+L  A K+F+     
Sbjct: 18  SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77

Query: 526 -KDLILWTSMINA 537
            +DL+ + +++ A
Sbjct: 78  DRDLVTYNAILAA 90


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/663 (40%), Positives = 414/663 (62%), Gaps = 21/663 (3%)

Query: 192 NLQVYVANALIAMYARCGKMTE------------------AAGVLYQLENKDSVSWNSML 233
           N +V++ N L+  YA+ G   E                  A  +  +L ++D +SWNSM+
Sbjct: 164 NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMI 223

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           +G+V N L  K +  F ++   G   D    V+ V+     G LL G+ LH YAIK  F 
Sbjct: 224 SGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFG 283

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            +L + N L+DMY+K   +N   +VF  M  +  +SWT++IAGYA+      ++ LF  +
Sbjct: 284 KELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEM 343

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
           + EG+  D+  I ++L AC+    +   K++H YI    + SDL + NA++D+Y KCG++
Sbjct: 344 EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSM 403

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             + +VF  ++ KD+VSW +MI  Y  N L NEAL LF  M + N + +SIT+   L A 
Sbjct: 404 GDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPAC 462

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           +SL+ L++G+E++G I+R GF+L+  VA++LVDMY +CGAL +A  +F+ +  KDL+ WT
Sbjct: 463 ASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWT 522

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
            MI   G+HG G  AI  F +M      PD ++F+++LYACSHSGL++EG  F  +MR +
Sbjct: 523 VMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNN 582

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
             ++P  EHYAC+VDLL RA +L +AY+F++ M IEP A +W ALL  CR++ + +L E 
Sbjct: 583 CCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEK 642

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
           VA+ + EL+P N G YVL++N++A + KW++V+++R R+   GL+K PG SWIEI  K+H
Sbjct: 643 VAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVH 702

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLA 772
            F+  D SH  +++I   L +   +++ E G+  + ++ L   ++ EK   L GHSE++A
Sbjct: 703 IFVTGDSSHPLANKIELLLKKTRTRMKEE-GHFPKMRYALIKADDTEKEMALCGHSEKIA 761

Query: 773 IAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           +A+G+L    G  +R+TKNLRVC DCH   K +S++  R++++RD+NRFHHF+ G CSC 
Sbjct: 762 MAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCR 821

Query: 833 DYW 835
            +W
Sbjct: 822 GHW 824



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 163/531 (30%), Positives = 269/531 (50%), Gaps = 60/531 (11%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLV-------------------LKCG--------YDST 92
           T+  V++ CA LK +  G +IH ++                   + CG        +D  
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 93  D----FIVNSLVAMYAKCYDFRK------------------ARQLFDRMGEKEDVVLWNS 130
                F+ N L+  YAK  +FR+                  AR+LFD +G++ DV+ WNS
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDR-DVISWNS 221

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +IS Y ++G   + L LF +M  +G+ T+  T V+ +  C ++    LG  +H   +K+ 
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
              ++ + N L+ MY++ G +  A  V   +  +  VSW SM+ G+ +  L   +++ F 
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           E++  G  PD       + A    G L NGK++H Y  +    SDL + N LMDMYAKC 
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG 401

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            +     VF +M  +D +SW T+I GY++N+   +AL LF  +Q      + + +  +L 
Sbjct: 402 SMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILP 460

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC+ L  + + +EIHG+I+R G S D  + NA+VD+Y KCG +  +R +F+ I  KD+VS
Sbjct: 461 ACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVS 520

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF-- 487
           WT MI+ Y  +G  +EA+  F  M  + +E D ++ +S L A S   +L +G    GF  
Sbjct: 521 WTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGW---GFFN 577

Query: 488 IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           ++R    +E      + +VD+ AR G L  A K    +  + D  +W +++
Sbjct: 578 MMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 628



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 200/366 (54%), Gaps = 2/366 (0%)

Query: 8   VLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKA 67
           V  A +LFD++  R V +WN+M+  YVSNG   + L+ + +M +LGI+ D  T   V+  
Sbjct: 201 VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAG 260

Query: 68  CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVL 127
           C+    L  G  +HG  +K  +     + N L+ MY+K  +   A Q+F+ MGE+  VV 
Sbjct: 261 CSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGER-SVVS 319

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           W S+I+ Y+  G    ++ LF EM++ G+  + +T    L AC  +     G ++H    
Sbjct: 320 WTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIK 379

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
           ++     ++V+NAL+ MYA+CG M +A  V  +++ KD VSWN+M+ G+ +N L  +A+ 
Sbjct: 380 ENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALN 439

Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
            F E+Q    KP+ +     + A   L  L  G+E+H + ++ GF  D  + N L+DMY 
Sbjct: 440 LFVEMQ-YNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYL 498

Query: 308 KCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
           KC  +     +F  +  +D +SWT +IAGY  +    +A+  F  ++  G++ D +   S
Sbjct: 499 KCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFIS 558

Query: 368 VLMACS 373
           +L ACS
Sbjct: 559 ILYACS 564



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 198/414 (47%), Gaps = 62/414 (14%)

Query: 251 ELQGAGQKPD----QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
           EL     KPD      C+V  + A   L ++ +G+ +H+         D  +G+ L+ MY
Sbjct: 89  ELINQSPKPDLELRTYCSVLQLCAD--LKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMY 146

Query: 307 AKCCCVNYMGRVFYQMTAQ----------------------------------------- 325
             C  +    R+F ++  +                                         
Sbjct: 147 VTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARK 206

Query: 326 --------DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
                   D ISW ++I+GY  N    K L+LF  + L G++ D+  + SV+  CS    
Sbjct: 207 LFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGM 266

Query: 378 MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           +   + +HGY I+     +L + N ++D+Y K GN++ +  VFE++  + VVSWTSMI+ 
Sbjct: 267 LLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAG 326

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           Y   GL++ ++ LF+ M +  +  D  T+ + L A +   +L+ GK+++ +I       +
Sbjct: 327 YAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSD 386

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             V+++L+DMYA+CG++  A+ VF+ +Q KD++ W +MI     +     A++LF +M+ 
Sbjct: 387 LFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQY 446

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYA-CLVDL 608
            S  P+ IT   +L AC+    +  G++    I+R  + LD    H A  LVD+
Sbjct: 447 NS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLD---RHVANALVDM 496



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 144/280 (51%), Gaps = 2/280 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G++  A Q+F+ + +R+V +W +M+  Y   G     +  +  M   GIS D FT
Sbjct: 295 MYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFT 354

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA    L+ G  +H  + +    S  F+ N+L+ MYAKC     A  +F  M 
Sbjct: 355 ITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQ 414

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+V WN++I  YS +    EAL LF EMQ      N+ T    L AC   +    G 
Sbjct: 415 VK-DIVSWNTMIGGYSKNSLPNEALNLFVEMQ-YNSKPNSITMACILPACASLAALERGQ 472

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   +++G +L  +VANAL+ MY +CG +  A  +   +  KD VSW  M+ G+  + 
Sbjct: 473 EIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHG 532

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
              +A+  F E++ +G +PD+V  ++ + A    G L  G
Sbjct: 533 YGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 572



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 162/347 (46%), Gaps = 56/347 (16%)

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIV 403
           +A+EL    Q    D ++    SVL  C+ LK +   + IH  I    +  D V+ + +V
Sbjct: 86  RAMELIN--QSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLV 143

Query: 404 DVYGKCGNIDYSRNVFESIES--------------------------------------- 424
            +Y  CG++   R +F+ + +                                       
Sbjct: 144 FMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVES 203

Query: 425 ----------KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
                     +DV+SW SMIS YV NGL+ + L+LF  M    + +D  T+VS ++  S+
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
             +L  G+ L+G+ I+  F  E ++ + L+DMY++ G L+ A +VF  +  + ++ WTSM
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSM 323

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD-Y 593
           I      G   +++ LF++ME E  +PD  T   +L+AC+ +GL+  GK     ++ +  
Sbjct: 324 IAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKM 383

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           Q D +  +   L+D+  +   + +A+     MQ++     W  ++G 
Sbjct: 384 QSDLFVSN--ALMDMYAKCGSMGDAHSVFSEMQVKDIVS-WNTMIGG 427



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 5/170 (2%)

Query: 385 HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           +G+I  +  S   ++++  ++Y  C  I  S    E+I+ K +  +   I  +   G   
Sbjct: 29  NGFIFFRPSSKTPLVSS--NLYHSCATIGTSVLPSETIDCK-ITDYNIEICRFCELGNLR 85

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
            A+EL     + ++E    T  S L   + L  ++ G+ ++  I      ++G + S LV
Sbjct: 86  RAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLV 143

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            MY  CG L    ++F+ V  + + LW  ++N     G  + ++ LF +M
Sbjct: 144 FMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRM 193


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 291/806 (36%), Positives = 469/806 (58%), Gaps = 24/806 (2%)

Query: 33  YVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDST 92
           Y SN  P RV        VL            ++ C   K+L    +I   ++K G+ + 
Sbjct: 34  YQSNSIPTRVYSHRHPSVVL------------LENCTSKKEL---YQILPFIIKNGFYNE 78

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM- 151
                 +++++ K     +A ++F+ +  K DV L++ ++  Y+ +    +AL  F  M 
Sbjct: 79  HLFQTKVISLFCKFGSNSEAARVFEHVELKLDV-LYHIMLKGYAKNSSLGDALCFFLRMM 137

Query: 152 -QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
              V LV   Y  +  LQ C ++     G EIH   + +G    ++V  A++++YA+C +
Sbjct: 138 CDEVRLVVGDYACL--LQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQ 195

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           +  A  +  ++++KD VSW +++ G+ QN    +A+Q   ++Q AGQKPD V  V+ + A
Sbjct: 196 IDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPA 255

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
              +  L  G+ +H YA + GF S + + N L+DMY KC        VF  M ++  +SW
Sbjct: 256 VADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSW 315

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
            T+I G AQN    +A   F  +  EG     + +  VL+AC+ L  + +   +H  + +
Sbjct: 316 NTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDK 375

Query: 391 KGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
             L S++ ++N+++ +Y KC  +D + ++F ++E K  V+W +MI  Y  NG   EAL L
Sbjct: 376 LKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTNVTWNAMILGYAQNGCVKEALNL 434

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           F +M    ++ D  TLV  ++A +  S+ ++ K ++G  +R   +    V+++LVDMYA+
Sbjct: 435 FCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAK 494

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CGA+  A K+F+ +Q + +I W +MI+  G HG GK  +DLF +M+  +  P+ ITFL++
Sbjct: 495 CGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSV 554

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           + ACSHSG + EG    + M+ DY L+P  +HY+ +VDLLGRA  L++A+ F++ M I+P
Sbjct: 555 ISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKP 614

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
              V  A+LGAC++H N ELGE  A+KL +LDP   G +VL++N++A++  W  V +VR 
Sbjct: 615 GISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRT 674

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
            M   GL KTPG SW+E+ N+IH+F +   +H ES +IY  L  + +++ +  GYV    
Sbjct: 675 AMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEI-KAAGYVPDPD 733

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
            + H+VEE+ K Q+L  HSERLAIA+G+L ++ G+ + I KNLRVC DCH   K +S + 
Sbjct: 734 SI-HDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVT 792

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
           GRE++VRD  RFHHF+ G CSCGDYW
Sbjct: 793 GREIIVRDLRRFHHFKNGSCSCGDYW 818



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 275/519 (52%), Gaps = 6/519 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++ K GS  +A ++F+ V  +    ++ ML  Y  N      L  + RM    + +    
Sbjct: 88  LFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGD 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           + C+++ C    DL  G +IHGL++  G++S  F++ +++++YAKC     A ++F+RM 
Sbjct: 148 YACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQ 207

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+V W ++++ Y+ +G    AL L  +MQ  G   ++ T V+ L A  D     +G 
Sbjct: 208 HK-DLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGR 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH    +SG    V V NAL+ MY +CG    A  V   + +K  VSWN+M+ G  QN 
Sbjct: 267 SIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNG 326

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F ++   G+ P +V  +  + A   LG+L  G  +H    K    S++ + N
Sbjct: 327 ESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMN 386

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MY+KC  V+    +F  +   + ++W  +I GYAQN C  +AL LF  +Q +G+  
Sbjct: 387 SLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKL 445

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNVF 419
           D   +  V+ A +      Q K IHG  +R  + + V ++ A+VD+Y KCG I  +R +F
Sbjct: 446 DCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLF 505

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + ++ + V++W +MI  Y  +G+  E L+LF  M +  V+ + IT +S +SA S    ++
Sbjct: 506 DMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVE 565

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA 516
           +G  L    +++ + LE ++   S++VD+  R G LD A
Sbjct: 566 EGLLLFK-SMQEDYYLEPTMDHYSAMVDLLGRAGQLDDA 603



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 211/436 (48%), Gaps = 14/436 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  + +A ++F+++  + + +W  ++  Y  NG   R L+   +M+  G   D+ T
Sbjct: 189 LYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVT 248

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A A +K L  G  IHG   + G++S   + N+L+ MY KC   R AR +F  M 
Sbjct: 249 LVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMR 308

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  VV WN++I   + +G+  EA   F +M   G V    T +  L AC +      G 
Sbjct: 309 SKT-VVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGW 367

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    K   +  V V N+LI+MY++C ++  AA +   LE K +V+WN+M+ G+ QN 
Sbjct: 368 FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTNVTWNAMILGYAQNG 426

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F  +Q  G K D    V  ++A          K +H  A++    +++ +  
Sbjct: 427 CVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVST 486

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  +    ++F  M  +  I+W  +I GY  +    + L+LF  +Q   +  
Sbjct: 487 ALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKP 546

Query: 361 DVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           + +   SV+ ACS       GL      +E   Y +   +      +A+VD+ G+ G +D
Sbjct: 547 NDITFLSVISACSHSGFVEEGLLLFKSMQE--DYYLEPTMDH---YSAMVDLLGRAGQLD 601

Query: 414 YSRNVFESIESKDVVS 429
            + N  + +  K  +S
Sbjct: 602 DAWNFIQEMPIKPGIS 617


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 291/836 (34%), Positives = 467/836 (55%), Gaps = 45/836 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G +  A+++F+ +  R   +W AM+     NG     +  + ++           
Sbjct: 208 LYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI----------- 256

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  ++  + G ++HGLVLK G+ S  ++ N+LV +Y++  +   A Q+F  M 
Sbjct: 257 ---VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMS 313

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ D V +NS+IS  +  G    AL LF++M       +  T  + L AC        G 
Sbjct: 314 QR-DRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGK 372

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H+  +K+G    + V  +L+ +Y +C  +  A               +     + Q D
Sbjct: 373 QFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTA---------------HEFFLCYGQLD 417

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              K+ Q F ++Q  G  P+Q    + +     LG    G+++H   +K GF  ++ + +
Sbjct: 418 NLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSS 477

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAK   +++  ++F ++   D +SWT +IAGY Q++   +AL LF+ +Q +G+ +
Sbjct: 478 VLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKS 537

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVF 419
           D +   S + AC+G++ + Q ++IH      G SD L I NA+V +Y +CG +  +   F
Sbjct: 538 DNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAF 597

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + I +KD VSW S++S +  +G   EAL +F  MN+A +E +S T  SA+SAA++++ ++
Sbjct: 598 DQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVR 657

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GK+++G I + G++ E  V+++L+ +YA+CG +D              I W SMI    
Sbjct: 658 IGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYS 704

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG G  A+ LF  M+     P+H+TF+ +L ACSH GL++EG  +   M   + L P P
Sbjct: 705 QHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKP 764

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC+VDLLGR+  L  A +FV  M I+P A VW  LL AC VH N ++GE  A  LLE
Sbjct: 765 EHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLE 824

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P +   YVL+SN++A S KW   ++ R  M+  G+KK PG SW+E+ N +H+F A D+
Sbjct: 825 LEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQ 884

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           +H  +D IY+ L  +  +   E GYV +   +L + E  +K      HSERLAIA+G+L 
Sbjct: 885 NHPRADMIYEYLRGLDFR-AAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLS 943

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            T  + + + KNLRVC DCH++ K VS++  R ++VRD+ RFHHF+ G CSC DYW
Sbjct: 944 LTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 257/526 (48%), Gaps = 39/526 (7%)

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
           L+  Y    D   A  +FD M  +  +  WN I + + A        GLFR M    +  
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRS-LSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF 161

Query: 159 NAYTFVAALQACEDSSFETLGME-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           +   F   L+ C  ++     +E IHA T+ SG     ++ N LI +Y + G ++ A  V
Sbjct: 162 DERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKV 221

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
              L+ +DSVSW +M++G  QN    +AM  F             C +  +SA  ++   
Sbjct: 222 FENLKARDSVSWVAMISGLSQNGYEEEAMLLF-------------CQI-VLSACTKVEFF 267

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             GK+LH   +KQGF S+  + N L+ +Y++   ++   ++F+ M+ +D +S+ ++I+G 
Sbjct: 268 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 327

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
           AQ     +AL LF+ + L+    D + + S+L AC+ +  +   K+ H Y I+ G+ SD+
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           V+  +++D+Y KC +I  +   F      D +               N++ ++F  M   
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNL---------------NKSFQIFTQMQIE 432

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +  +  T  S L   ++L     G++++  +++ GF     V+S L+DMYA+ G LD A
Sbjct: 433 GIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHA 492

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            K+F  ++  D++ WT+MI     H +   A++LF +M+ +    D+I F + + AC+  
Sbjct: 493 LKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGI 552

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYA---CLVDLLGRANHLEEAY 619
             +++G++ +    C   L  + +  +    LV L  R   + EAY
Sbjct: 553 QALDQGRQ-IHAQSC---LSGYSDDLSIGNALVSLYARCGKVREAY 594



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 153/623 (24%), Positives = 278/623 (44%), Gaps = 78/623 (12%)

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           D + EKE+ +  N       ASG     +G    M++ G+  N+ TF+  L+ C +S   
Sbjct: 50  DEIPEKENEMDGN-------ASG-----IGYLHLMEQHGVRANSQTFLWLLEGCLNSR-- 95

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
                              Y    LI  Y   G +  A  V  ++  +    WN +   F
Sbjct: 96  -----------------SFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTF 138

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK---ELHAYAIKQGFV 293
           +   L  +    FR +     + D+   + AV   G  GN ++ +   ++HA  I  GF 
Sbjct: 139 IAERLMGRVPGLFRRMLTKNVEFDE--RIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFE 196

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S   I N L+D+Y K   ++   +VF  + A+D +SW  +I+G +QN    +A+ LF  +
Sbjct: 197 SSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI 256

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
                         VL AC+ ++     K++HG ++++G  S+  + NA+V +Y + GN+
Sbjct: 257 --------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNL 302

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             +  +F  +  +D VS+ S+IS     G  N AL LF  MN    + D +T+ S LSA 
Sbjct: 303 SSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSAC 362

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           +S+  L  GK+ + + I+ G   +  V  SL+D+Y +C  +  A++ F C    D     
Sbjct: 363 ASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLD----- 417

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRC 591
              N N        +  +F +M+ E   P+  T+ ++L  C+  G  + G++   ++++ 
Sbjct: 418 ---NLNK-------SFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT 467

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
            +Q + +    + L+D+  +   L+ A +  R ++ E     W A++     H       
Sbjct: 468 GFQFNVYVS--SVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMIAGYTQHDKFTEAL 524

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
            + K++   D G   + +  ++  +A    + ++Q R     S L     S  + IGN +
Sbjct: 525 NLFKEM--QDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGY--SDDLSIGNAL 580

Query: 712 HSFIAR----DKSHSESDEIYKK 730
            S  AR     ++++  D+IY K
Sbjct: 581 VSLYARCGKVREAYAAFDQIYAK 603


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 296/799 (37%), Positives = 446/799 (55%), Gaps = 65/799 (8%)

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
           +VA Y  C     A  + +R+      V WN +I  +   G+   A+ +   M R G   
Sbjct: 57  VVASYLACGATDYALLVLERV-TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRL 115

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           + +T    L+AC +      G   H     +G    V++ NAL+AMY+RCG + EA+ + 
Sbjct: 116 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 175

Query: 219 YQLENK---DSVSWNSMLTGFVQNDLYCKAMQFFREL------QGAGQKPDQVCTVNAVS 269
            ++  +   D +SWNS+++  V++     A+  F ++      +   ++ D +  VN + 
Sbjct: 176 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 235

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A G L  +   KE+H  AI+ G   D+ +GN L+D YAKC  +    +VF  M  +D +S
Sbjct: 236 ACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 295

Query: 330 W-----------------------------------TTIIAGYAQNNCHLKALELFRTVQ 354
           W                                   T +IAGY+Q  C  +AL +FR + 
Sbjct: 296 WNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMI 355

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-----------SDLVILNAIV 403
             G   + + I SVL AC+ L   SQ  EIH Y ++  L            DL++ NA++
Sbjct: 356 FSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 415

Query: 404 DVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNGLANEALELFYLM--NEANVE 459
           D+Y KC +   +R++F+ I  E ++VV+WT MI  +   G +N+AL+LF  M      V 
Sbjct: 416 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 475

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS---VASSLVDMYARCGALDIA 516
            ++ T+   L A + L+ ++ GK+++ +++R     + S   VA+ L++MY++CG +D A
Sbjct: 476 PNAYTISCILMACAHLAAIRIGKQIHAYVLRH-HQYDSSAYFVANCLINMYSKCGDVDTA 534

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             VF+ +  K  I WTSM+   G+HGRG  A+D+F KM    F PD ITFL +LYACSH 
Sbjct: 535 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 594

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           G++++G  + + M  DY L P  EHYA  +DLL R   L++A++ V+ M +EPTA VW A
Sbjct: 595 GMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVA 654

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL ACRVHSN EL E    KL+E++  N G+Y LISN++A + +WKDV ++R  M+ SG+
Sbjct: 655 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 714

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           KK PG SW++      SF   D+SH  S +IY  L  + +++ +  GYV +T F LH+V+
Sbjct: 715 KKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRI-KAMGYVPETNFALHDVD 773

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EEEK  +L  HSE+LA+AYG+L +  G  IRITKNLRVC DCHS    +S++   E+VVR
Sbjct: 774 EEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVR 833

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D +RFHHF+ G CSCG YW
Sbjct: 834 DPSRFHHFKNGSCSCGGYW 852



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 183/622 (29%), Positives = 304/622 (48%), Gaps = 65/622 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG+   A  + ++V+      WN ++  ++  G     +    RM   G  +D FT 
Sbjct: 61  YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTL 120

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+KAC  L    CG+  HGL+   G++S  FI N+LVAMY++C    +A  +FD + +
Sbjct: 121 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 180

Query: 122 K--EDVVLWNSIISAYSASGQCLEALGLFREM------QRVGLVTNAYTFVAALQACEDS 173
           +  +DV+ WNSI+SA+  S     AL LF +M      +     ++  + V  L AC   
Sbjct: 181 RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL 240

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                  E+H   +++G  L V+V NALI  YA+CG M  A  V   +E KD VSWN+M+
Sbjct: 241 KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 300

Query: 234 TGFVQNDLY---------------------------------C--KAMQFFRELQGAGQK 258
            G+ Q+  +                                 C  +A+  FR++  +G  
Sbjct: 301 AGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSL 360

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS----------DLQIGNTLMDMYAK 308
           P+ V  ++ +SA   LG    G E+HAY++K   ++          DL + N L+DMY+K
Sbjct: 361 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 420

Query: 309 CCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE--GLDADVMI 364
           C        +F    +  ++ ++WT +I G+AQ      AL+LF  +  E  G+  +   
Sbjct: 421 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 480

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLSD---LVILNAIVDVYGKCGNIDYSRNVFES 421
           I  +LMAC+ L  +   K+IH Y++R    D     + N ++++Y KCG++D +R+VF+S
Sbjct: 481 ISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDS 540

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  K  +SWTSM++ Y  +G  +EAL++F  M +A    D IT +  L A S   ++ +G
Sbjct: 541 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 600

Query: 482 -KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK-VFNCVQTKDLILWTSMINANG 539
               +      G        +  +D+ AR G LD A K V +       ++W ++++A  
Sbjct: 601 LSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACR 660

Query: 540 LHGRGKV---AIDLFYKMEAES 558
           +H   ++   A++   +M AE+
Sbjct: 661 VHSNVELAEHALNKLVEMNAEN 682



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 238/508 (46%), Gaps = 61/508 (12%)

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           +   ++A Y  CG    A  VL ++    +V WN ++   ++      A+     +  AG
Sbjct: 53  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            + D     + + A G L +   G   H      GF S++ I N L+ MY++C  +    
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172

Query: 317 RVFYQMTAQ---DFISWTTIIAGYAQNNCHLKALELFRTVQL------EGLDADVMIIGS 367
            +F ++T +   D ISW +I++ + +++    AL+LF  + L          +D++ I +
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L AC  LK + QTKE+HG  IR G   D+ + NA++D Y KCG ++ +  VF  +E KD
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESD------------------------- 461
           VVSW +M++ Y  +G    A ELF  M + N+  D                         
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352

Query: 462 ----------SITLVSALSAASSLSILKKGKELNGFIIRK----------GFNLEGSVAS 501
                      +T++S LSA +SL    +G E++ + ++           G + +  V +
Sbjct: 353 QMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 412

Query: 502 SLVDMYARCGALDIANKVFNCV--QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
           +L+DMY++C +   A  +F+ +  + ++++ WT MI  +  +G    A+ LF +M +E +
Sbjct: 413 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 472

Query: 560 --APDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA-CLVDLLGRANHLE 616
             AP+  T   +L AC+H   I  GK+    +   +Q D      A CL+++  +   ++
Sbjct: 473 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVD 532

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVH 644
            A     SM  + +A  W +++    +H
Sbjct: 533 TARHVFDSMS-QKSAISWTSMMTGYGMH 559



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 252/549 (45%), Gaps = 89/549 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR---TVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----- 52
           MY +CGS+ +A  +FD+++QR    V +WN+++ A+V +      L+ +S+M ++     
Sbjct: 161 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 220

Query: 53  -GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY---- 107
                D  +   ++ AC  LK +    ++HG  ++ G     F+ N+L+  YAKC     
Sbjct: 221 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMEN 280

Query: 108 ---------------------------DFRKARQLFDRMGEKE---DVVLWNSIISAYSA 137
                                      +F+ A +LF  M ++    D+V W ++I+ YS 
Sbjct: 281 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQ 340

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS-------- 189
            G   EAL +FR+M   G + N  T ++ L AC      + GMEIHA ++K+        
Sbjct: 341 RGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDND 400

Query: 190 --GQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQNDLYCKA 245
             G++  + V NALI MY++C     A  +     LE ++ V+W  M+ G  Q      A
Sbjct: 401 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 460

Query: 246 MQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK--QGFVSDLQIGNT 301
           ++ F E+  +  G  P+       + A   L  +  GK++HAY ++  Q   S   + N 
Sbjct: 461 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANC 520

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L++MY+KC  V+    VF  M+ +  ISWT+++ GY  +    +AL++F  ++  G   D
Sbjct: 521 LINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 580

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------------IVDVYGK 408
            +    VL ACS           H  ++ +GLS    ++A              +D+  +
Sbjct: 581 DITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLAR 629

Query: 409 CGNIDYS-RNVFESIESKDVVSWTSMISS-YVHNG--LANEALELFYLMNEANVESDSIT 464
            G +D + + V +       V W +++S+  VH+   LA  AL     MN  N    S T
Sbjct: 630 FGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN--DGSYT 687

Query: 465 LVSALSAAS 473
           L+S + A +
Sbjct: 688 LISNIYATA 696



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 152/304 (50%), Gaps = 15/304 (4%)

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
           + F+S   +G  ++  Y  C   +Y   V  ++T    + W  +I  + +      A+ +
Sbjct: 45  EPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINV 104

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
              +   G   D   +  VL AC  L         HG I   G  S++ I NA+V +Y +
Sbjct: 105 SCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSR 164

Query: 409 CGNIDYSRNVFESIESK---DVVSWTSMISSYVHNGLANEALELFYLMN------EANVE 459
           CG+++ +  +F+ I  +   DV+SW S++S++V +  A  AL+LF  M         N  
Sbjct: 165 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 224

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
           SD I++V+ L A  SL  + + KE++G  IR G  L+  V ++L+D YA+CG ++ A KV
Sbjct: 225 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKV 284

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL-----YACS 574
           FN ++ KD++ W +M+      G  K A +LF  M  E+   D +T+ A++       CS
Sbjct: 285 FNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCS 344

Query: 575 HSGL 578
           H  L
Sbjct: 345 HEAL 348


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 283/836 (33%), Positives = 459/836 (54%), Gaps = 3/836 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC     A  +  K+  R V +W A++   V+ G     +  +  M+  GI  + FT
Sbjct: 156 VYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFT 215

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               +KAC++   LD G ++H    K G     F+ ++LV +YAKC +   A ++F  M 
Sbjct: 216 LATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP 275

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DV  WN +++ Y+  G     L LF  M  + +  N +T    L+ C +S     G 
Sbjct: 276 EQNDVT-WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQ 334

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH+  +K G     ++   L+ MY++CG   +A GV   ++  D V W++++T   Q  
Sbjct: 335 VIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQG 394

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              ++++ F  ++     P+Q    + +SA+   GNL  G+ +HA   K GF +D+ + N
Sbjct: 395 QSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSN 454

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MY K  CV+   +++  M  +D ISW   ++G      + + L +F  +  EG   
Sbjct: 455 ALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIP 514

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVF 419
           ++    S+L +CS L  +   +++H +II+  L D   +  A++D+Y KC  ++ +   F
Sbjct: 515 NMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAF 574

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  +D+ +WT +I++Y       +AL  F  M +  V+ +  TL   LS  SSL+ L+
Sbjct: 575 NRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLE 634

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G++L+  + + G   +  V S+LVDMYA+CG ++ A  +F  +  +D I W ++I    
Sbjct: 635 GGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYA 694

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            +G+G  A+  F  M  E  +PD +TF  +L ACSH GL+ EGK+    M  D+ + P  
Sbjct: 695 QNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTV 754

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           +H AC+VD+LGR    +E   F++ MQ+   A +W  +LGA ++H+N  LGE  A KL E
Sbjct: 755 DHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFE 814

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L P    +Y+L+SN+FA   +W DV++VR  M   G+KK PG SW+E   ++H+F++ D 
Sbjct: 815 LQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDY 874

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH +  EI+ KL E+  +L     YV +T++VLHNV E EK + L  HSERLA+ + ++ 
Sbjct: 875 SHPQIQEIHLKLDELDRELA-SIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALIS 933

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++    IRI KNLR+C DCH   K +S +  +E+VVRD  RFHHF+ G CSC D+W
Sbjct: 934 TSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 305/629 (48%), Gaps = 10/629 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +++ CA  + L     IHGL++K   +    +  SLV +YAKC     AR +  +M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ DVV W ++I    A G   +++ LF+EMQ  G++ N +T    L+AC       LG 
Sbjct: 175 DR-DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGK 233

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA   K G  L ++V +AL+ +YA+CG++  A+ +   +  ++ V+WN +L G+ Q  
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                ++ F  +     K ++      +       NL  G+ +H+  IK G+  +  IG 
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353

Query: 301 TLMDMYAKC-CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            L+DMY+KC   ++ +G VF  +   D + W+ +I    Q     ++++LF  ++L    
Sbjct: 354 GLVDMYSKCGLAIDAIG-VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            +   I S+L A +    +   + IH  + + G  +D+ + NA+V +Y K G +     +
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           +ES+  +D++SW + +S     G+ +  L +FY M E     +  T +S L + S L  +
Sbjct: 473 YESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDV 532

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             G++++  II+   +    V ++L+DMYA+C  L+ A+  FN +  +DL  WT +I   
Sbjct: 533 HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY 592

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDP 597
               +G+ A++ F +M+ E   P+  T    L  CS    +  G++    + +  +  D 
Sbjct: 593 AQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDM 652

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
           +    + LVD+  +   +EEA     ++ I      W  ++  C    N +  + +    
Sbjct: 653 FVG--SALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII--CGYAQNGQGNKALTAFR 707

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           + LD G   + V  + + +A      VE+
Sbjct: 708 MMLDEGISPDGVTFTGILSACSHQGLVEE 736


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 285/794 (35%), Positives = 448/794 (56%), Gaps = 58/794 (7%)

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           ++ +   A +HG++          + N L+  Y+       A  LFD M  + D V W+ 
Sbjct: 97  VRQVHAQASVHGML------ENIVVANKLIYFYSYYRALDDAYGLFDGMCVR-DSVSWSV 149

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           ++  ++  G  +   G FRE+ R G   + YT    ++AC D                  
Sbjct: 150 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDL----------------- 192

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
           +NLQ+    AL+ MY +C ++ +A  +  +++ +D V+W  M+ G+ +     +++  F 
Sbjct: 193 KNLQM----ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 248

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           +++  G  PD+V  V  V A  +LG +   + +  Y  ++ F  D+ +G  ++DMYAKC 
Sbjct: 249 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 308

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
           CV     +F +M  ++ ISW+ +IA Y  +    KAL+LFR +   G+  D + + S+L 
Sbjct: 309 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 368

Query: 371 ACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC   + ++Q +++H      G L +L++ N +V  Y     +D +  +F+ +  +D VS
Sbjct: 369 ACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVS 428

Query: 430 WTSMISSYVHNGL----------------------------ANEALELFYLMNEANVESD 461
           W+ M+  +   G                             ANE+L LF  M E  V  D
Sbjct: 429 WSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPD 488

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
            + +V+ + A + L  + K + ++ +I RK F L+  + ++++DM+A+CG ++ A ++F+
Sbjct: 489 KVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFD 548

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            ++ K++I W++MI A G HG+G+ A+DLF  M      P+ IT ++LLYACSH+GL+ E
Sbjct: 549 RMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEE 608

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G +F  +M  DY +    +HY C+VDLLGRA  L+EA + + SM +E    +W A LGAC
Sbjct: 609 GLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGAC 668

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           R H +  L E  A  LLEL P NPG+Y+L+SN++A + +W+DV + R  M    LKK PG
Sbjct: 669 RTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPG 728

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            +WIE+ NK H F   D +H  S EIY+ L  +  KLE   GYV  T FVLH+V+EE K+
Sbjct: 729 WTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELV-GYVPDTNFVLHDVDEELKI 787

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
            +LY HSE+LAIA+G++ + E + IRI KNLRVC DCH+FCKLVS + GR ++VRDANRF
Sbjct: 788 GILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRF 847

Query: 822 HHFEAGVCSCGDYW 835
           HHF+ G CSCGDYW
Sbjct: 848 HHFKEGACSCGDYW 861



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 163/599 (27%), Positives = 291/599 (48%), Gaps = 62/599 (10%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           DA  LFD +  R   +W+ M+G +   G+ +    T+  +   G   D +T P VI+AC 
Sbjct: 131 DAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACR 190

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
            LK+L                       +LV MY KC +   AR LFD+M E+ D+V W 
Sbjct: 191 DLKNLQM---------------------ALVDMYVKCREIEDARFLFDKMQER-DLVTWT 228

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
            +I  Y+  G+  E+L LF +M+  G+V +    V  + AC           I     + 
Sbjct: 229 VMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRK 288

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
              L V +  A+I MYA+CG +  A  +  ++E K+ +SW++M+  +  +    KA+  F
Sbjct: 289 KFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 348

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           R +  +G  PD++   + + A     NL   +++HA A   G + +L + N L+  Y+  
Sbjct: 349 RMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYY 408

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL------------------------- 344
             ++    +F  M  +D +SW+ ++ G+A+   ++                         
Sbjct: 409 RALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCG 468

Query: 345 ---KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILN 400
              ++L LF  ++ EG+  D + + +V+ AC+ L  M + + I  YI RK    D+++  
Sbjct: 469 NANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGT 528

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A++D++ KCG ++ +R +F+ +E K+V+SW++MI++Y ++G   +AL+LF +M  + +  
Sbjct: 529 AMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILP 588

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANK 518
           + ITLVS L A S   ++++G      ++ + +++   V   + +VD+  R G LD A K
Sbjct: 589 NKITLVSLLYACSHAGLVEEGLRFFS-LMWEDYSVRADVKHYTCVVDLLGRAGRLDEALK 647

Query: 519 VFNCVQT-KDLILWTSMINANGLHGR----GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +   +   KD  LW + + A   H       K A  L   +E +   P H   L+ +YA
Sbjct: 648 LIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSL---LELQPQNPGHYILLSNIYA 703



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 225/472 (47%), Gaps = 42/472 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  + DA  LFDK+ +R + TW  M+G Y   G+    L  + +MR  G+  D   
Sbjct: 202 MYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVA 261

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA L  +     I   + +  +     +  +++ MYAKC     AR++FDRM 
Sbjct: 262 MVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME 321

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK +V+ W+++I+AY   GQ  +AL LFR M   G++ +  T  + L AC +    T   
Sbjct: 322 EK-NVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVR 380

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA     G    + VAN L+  Y+    + +A G+   +  +DSVSW+ M+ GF +  
Sbjct: 381 QVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 440

Query: 241 LYCKAMQFFRELQGAGQK----------------------------PDQVCTVNAVSASG 272
            Y      FREL   G +                            PD+V  V  V A  
Sbjct: 441 DYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACA 500

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           +LG +   + +  Y  ++ F  D+ +G  ++DM+AKC CV     +F +M  ++ ISW+ 
Sbjct: 501 KLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSA 560

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIH 385
           +IA Y  +    KAL+LF  +   G+  + + + S+L ACS       GL+  S   E  
Sbjct: 561 MIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWE-- 618

Query: 386 GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
            Y +R   +D+     +VD+ G+ G +D +  + ES+   KD   W + + +
Sbjct: 619 DYSVR---ADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 667



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 166/306 (54%), Gaps = 20/306 (6%)

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           +SA     NL   +++HA A   G + ++ + N L+  Y+    ++    +F  M  +D 
Sbjct: 85  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW+ ++ G+A+   ++     FR +   G   D   +  V+ AC  LK +         
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM------- 197

Query: 388 IIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
                        A+VD+Y KC  I+ +R +F+ ++ +D+V+WT MI  Y   G ANE+L
Sbjct: 198 -------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESL 244

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
            LF  M E  V  D + +V+ + A + L  + K + ++ +I RK F L+  + ++++DMY
Sbjct: 245 VLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMY 304

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           A+CG ++ A ++F+ ++ K++I W++MI A G HG+G+ A+DLF  M +    PD IT  
Sbjct: 305 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLA 364

Query: 568 ALLYAC 573
           +LLYAC
Sbjct: 365 SLLYAC 370


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 296/837 (35%), Positives = 469/837 (56%), Gaps = 37/837 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G V +   LF+++  R V  WN ML AY+  G     ++  S     G+  +  T
Sbjct: 196 IYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEIT 255

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +             ++I G   + G           V  +    D     ++  R  
Sbjct: 256 LRLL-------------SRISGDDSEAGQ----------VKSFENGNDASAVSEIISR-- 290

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
                   N I+S Y  +GQ    L  F +M    L  +  TF+  L          LG 
Sbjct: 291 --------NKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQ 342

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +K G +L + V+N+LI MY +  K+  A  V   +  +D +SWNS++ G  Q+D
Sbjct: 343 QVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSD 402

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIG 299
           L  +A+  F +L   G KPD     + + A+  L   L+  K++H +AIK   V+D  + 
Sbjct: 403 LEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVS 462

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+D Y++  C+     V +     D ++W  +++GY Q++   K LELF  +  +G  
Sbjct: 463 TALIDAYSRNRCMKE-AEVLFGRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGER 521

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
           +D   + +VL  C  L  ++Q K++H Y I+ G   DL + + I+D+Y KCG++  ++  
Sbjct: 522 SDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 581

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+SI   D V+WT++IS  + NG    AL +F  M    V  D  T+ +   A+S L+ L
Sbjct: 582 FDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 641

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           ++G++++   ++     +  V +SLVDMYA+CG++D A  +F  ++  ++  W +M+   
Sbjct: 642 EQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 701

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             HG GK A+ LF +ME+    PD +TF+ +L ACSHSGL++E  K++  M  DY + P 
Sbjct: 702 AQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPE 761

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY+CL D LGRA  ++EA   + SM +E +A ++  LL ACRV  + E G+ VA KLL
Sbjct: 762 IEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLL 821

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           EL+P +   YVL+SN++AA+ KW +++  R  M+G  +KK PG SWIE+ NKIH F+  D
Sbjct: 822 ELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDD 881

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           +S+ +++ IYKK+ ++   +++E GYV +T F L +VEEEEK + LY HSE+LA+A+G+L
Sbjct: 882 RSNPQTELIYKKVKDMIRDIKQE-GYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLL 940

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +   + IR+ KNLRVC DCH+  K +S+++ RE+V+RDANRFH F+ G+CSCGDYW
Sbjct: 941 STPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 182/651 (27%), Positives = 316/651 (48%), Gaps = 55/651 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPL--RVLETYSRMRVLGISV-- 56
           MY KCGS+  A ++FDK+ +R + +WN++L AY  + E +   V E +   R+L   V  
Sbjct: 90  MYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVY 149

Query: 57  -DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
               T   ++K C     +      HG   K G D  DF+  +LV +Y K    ++ R L
Sbjct: 150 TSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVL 209

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           F+ M  + DVVLWN ++ AY   G   EA+ L       GL  N  T     +   D S 
Sbjct: 210 FEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDS- 267

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                   A  VKS +N                    +A+ V       + +S N +L+G
Sbjct: 268 -------EAGQVKSFEN------------------GNDASAV------SEIISRNKILSG 296

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           ++    Y   ++ F ++  +  + DQV  +  ++ + RL +L  G+++H  A+K G    
Sbjct: 297 YLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLM 356

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           L + N+L++MY K   +     VF  M+ +D ISW ++IAG AQ++  ++A+ LF  +  
Sbjct: 357 LTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLR 416

Query: 356 EGLDADVMIIGSVLMACSGL-KCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYG-----K 408
            GL  D   + SVL A S L + +S +K+IH + I+   ++D  +  A++D Y      K
Sbjct: 417 CGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMK 476

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
              + + RN F      D+V+W +M+S Y  +   ++ LELF LM++    SD  TL + 
Sbjct: 477 EAEVLFGRNNF------DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATV 530

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           L     L  + +GK+++ + I+ G++L+  V+S ++DMY +CG +  A   F+ +   D 
Sbjct: 531 LKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 590

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LE 587
           + WT++I+    +G  + A+ +F +M      PD  T   L  A S    + +G++    
Sbjct: 591 VAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 650

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
            ++ +   DP+      LVD+  +   +++AY   + +++      W A+L
Sbjct: 651 ALKLNCTSDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAML 698



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 154/617 (24%), Positives = 272/617 (44%), Gaps = 48/617 (7%)

Query: 33  YVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDST 92
           + S   PLR+    S       S   F F   ++      DL  G   H  +L    +  
Sbjct: 24  FPSLPPPLRLTSAASPFSSSSTSSQCFGF---LRDAISTSDLMLGKCTHARILALEENPE 80

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCL-----EALGL 147
            F+VN+L++MY+KC     AR++FD+M E+ D+V WNSI++AY+ S + +     EA  L
Sbjct: 81  RFLVNNLISMYSKCGSLTYARRVFDKMPER-DLVSWNSILAAYAQSSEGVVENVKEAFLL 139

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           FR +++  + T+  T    L+ C  S +       H    K G +   +VA AL+ +Y +
Sbjct: 140 FRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLK 199

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
            GK+ E   +  ++  +D V WN ML  +++     +A+        +G  P+++     
Sbjct: 200 FGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL--- 256

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
                RL + ++G +  A     G V   + GN                         + 
Sbjct: 257 -----RLLSRISGDDSEA-----GQVKSFENGND-------------------ASAVSEI 287

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           IS   I++GY     +   L+ F  +    L+ D +    VL     L  ++  +++H  
Sbjct: 288 ISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCM 347

Query: 388 IIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            ++ GL   L + N+++++Y K   I  +R VF ++  +D++SW S+I+    + L  EA
Sbjct: 348 ALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEA 407

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSI-LKKGKELNGFIIRKGFNLEGSVASSLVD 505
           + LF  +    ++ D  T+ S L AASSL   L   K+++   I+     +  V+++L+D
Sbjct: 408 VCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALID 467

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
            Y+R   +  A  +F      DL+ W +M++       G   ++LF  M  +    D  T
Sbjct: 468 AYSRNRCMKEAEVLFG-RNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFT 526

Query: 566 FLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
              +L  C     IN+GK+     ++  Y LD W    + ++D+  +   +  A QF   
Sbjct: 527 LATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAA-QFAFD 583

Query: 625 MQIEPTAEVWCALLGAC 641
               P    W  L+  C
Sbjct: 584 SIPVPDDVAWTTLISGC 600


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 286/754 (37%), Positives = 431/754 (57%), Gaps = 3/754 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG+ LDA+ +F ++       WN M+  +   G+    L  Y +M   G   D +T
Sbjct: 90  MYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYT 149

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP VIKAC  L  +  G  +H  +   G++   F+ +SL+  Y++      AR LFDRM 
Sbjct: 150 FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP 209

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D VLWN +++ Y  +G    A G+F EM+R     N+ TF   L  C        G 
Sbjct: 210 SK-DGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   V SG  +   VAN L+AMYA+CG + +A  +   +   D V+WN M++G+VQN 
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F E+  A  KPD +   + +        L  GKE+H Y I+ G   D+ + +
Sbjct: 329 FMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKS 388

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y KC  V    ++F Q T  D +  T +I+GY  N  +  ALE+FR +  E + A
Sbjct: 389 ALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRA 448

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           + + + SVL AC+GL  ++  KE+HG+I++ G      + +AI+D+Y KCG +D +   F
Sbjct: 449 NSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTF 508

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I  KD V W SMI+S   NG   EA++LF  M  A  + D +++ +ALSA ++L  L 
Sbjct: 509 IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALH 568

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GKE++ F++R  F  +    S+L+DMY++CG LD+A +VF+ ++ K+ + W S+I A G
Sbjct: 569 YGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYG 628

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HGR K +++LF+ M  +   PDH+TFLA++ AC H+G ++EG  +   M  +  +    
Sbjct: 629 NHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARM 688

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC+VDL GRA  L EA+  + SM   P A VW  LLGACR+H N EL E+ ++ L +
Sbjct: 689 EHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFD 748

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LDP N G YVL+SNV A + +W+ V ++R  M+  G++K PG SWI++ N  H F+A D+
Sbjct: 749 LDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADR 808

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
           SH +S +IY  L  +  +L +E GYV Q    +H
Sbjct: 809 SHPQSSQIYLLLKNLFLELRKE-GYVPQLYLPMH 841



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 225/427 (52%), Gaps = 1/427 (0%)

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
           A   V+ LQ C D S  + G + HA  + +G      +   L+ MY  CG   +A  + Y
Sbjct: 46  APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFY 105

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
           QL    S  WN M+ GF     +  A+ F+ ++ G G  PD+      + A G L ++  
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVAL 165

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +H      GF  D+ +G++L+  Y++  C++    +F +M ++D + W  ++ GY +
Sbjct: 166 GRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK 225

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
           N     A  +F  ++    + + +    VL  C+    ++   ++HG ++  GL  D  +
Sbjct: 226 NGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPV 285

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            N ++ +Y KCG++  +R +F+ +   D+V+W  MIS YV NG  +EA  LF+ M  A +
Sbjct: 286 ANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARM 345

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           + DSIT  S L   S  + L++GKE++ +IIR G +L+  + S+L+D+Y +C  +++A K
Sbjct: 346 KPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARK 405

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           +F+     D+++ T+MI+   L+G    A+++F  +  E    + +T  ++L AC+    
Sbjct: 406 IFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAA 465

Query: 579 INEGKKF 585
           +  GK+ 
Sbjct: 466 LTLGKEL 472



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 54/117 (46%)

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           N +S +  LVS L   +  S L +G++ +  ++  G    G + + L+ MY  CGA   A
Sbjct: 41  NDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDA 100

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
             +F  ++      W  MI    + G+   A+  ++KM      PD  TF  ++ AC
Sbjct: 101 KNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKAC 157


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 292/776 (37%), Positives = 448/776 (57%), Gaps = 10/776 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEK 122
           V+K C ++ D   G ++H L +KCG+D  +  V  +LV MY KC      R +F+ M  K
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM-PK 163

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            +VV W S+++ Y     C + + LF  M+  G+  N +TF + L A        LG  +
Sbjct: 164 RNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRV 223

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA +VK G    V+V N+LI MY++CG + EA  V  Q+E +D VSWN+++ G + N+  
Sbjct: 224 HAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQ 283

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A+Q F + + +  K  Q      +     L  L   ++LH+  +K GF SD  +   +
Sbjct: 284 LEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAI 343

Query: 303 MDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           MD Y+KC  ++    +F  M  +Q+ +SWT +I G  QN     A  LF  ++ + +  +
Sbjct: 344 MDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPN 403

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFE 420
                +VL A   +       +IH  II+        +  A++  Y K GN + + ++F+
Sbjct: 404 EFTYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFK 459

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILK 479
            I+ KDVV+W++M+S Y   G  + A  +F  M+   ++ +  T+ SA+ A AS  + + 
Sbjct: 460 MIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGID 519

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +G++ +   I+  +     V S+LV MYAR G++D A  VF     +DL+ W SMI+   
Sbjct: 520 QGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYA 579

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG  K A+D F +ME      D  TFLA++  C+H+GL+ EG+++ + M  D+ + P  
Sbjct: 580 QHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTM 639

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY+C+VDL  RA  L+E    +  M     A VW  LLGACRVH N ELG++ A+KLL 
Sbjct: 640 EHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLL 699

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P +   YVL+SN++AA+ +WK+ ++VR  M    +KK  G SWI+I NK+HSFIA DK
Sbjct: 700 LEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDK 759

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH  S++IY KL  +T +L++E GY   T  VLH++ EE+K  ML  HSERLA+A+G++ 
Sbjct: 760 SHPLSEQIYAKLKAMTTRLKQE-GYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIA 818

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +   + ++I KNLRVC DCH   K+VS +  RE+++RD +RFHHF AG CSCGD+W
Sbjct: 819 TPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 275/546 (50%), Gaps = 10/546 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V D   +F+ + +R V TW ++L  YV       V+  + RMR  G+  + FT
Sbjct: 144 MYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFT 203

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ A A    +D G ++H   +K G  ST F+ NSL+ MY+KC    +A+ +F +M 
Sbjct: 204 FTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQM- 262

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  D+V WN++++    +   LEAL LF + +      +  T+   ++ C +     L  
Sbjct: 263 ETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALAR 322

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQN 239
           ++H+  +K G +    V  A++  Y++CG++ +A  +   +  +++ VSW +M+ G +QN
Sbjct: 323 QLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQN 382

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A   F  ++    KP++      ++AS  +  LL   ++HA  IK  +     +G
Sbjct: 383 ADIPLAAALFSRMREDNVKPNEFTYSTVLTAS--IPILL--PQIHAQIIKTNYQHAPSVG 438

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+  Y+K         +F  +  +D ++W+ +++ Y+Q      A  +F  + ++G+ 
Sbjct: 439 TALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMK 498

Query: 360 ADVMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRN 417
            +   I S + AC S    + Q ++ H   I+    D + + +A+V +Y + G+ID +R 
Sbjct: 499 PNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARI 558

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VFE    +D+VSW SMIS Y  +G + EAL+ F  M    +E D  T ++ +   +   +
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGL 618

Query: 478 LKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALD-IANKVFNCVQTKDLILWTSMI 535
           +K+G++  +  ++    +      S +VD+Y+R G LD   N +         ++W +++
Sbjct: 619 VKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLL 678

Query: 536 NANGLH 541
            A  +H
Sbjct: 679 GACRVH 684


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 286/730 (39%), Positives = 440/730 (60%), Gaps = 8/730 (1%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           ARQ+FDR+    D   +N++I AYS  G    A+ L+R M R  +  N YTF   L+AC 
Sbjct: 53  ARQVFDRI-PAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACS 111

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
                  G  IHA    +G +  ++V+ ALI +Y RC +   A  V  ++  +D V+WN+
Sbjct: 112 ALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNA 171

Query: 232 MLTGFVQNDLYCKAMQFFRELQG-AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           ML G+  + +Y  A+    ++Q   G +P+    V+ +    + G L  G  +HAY ++ 
Sbjct: 172 MLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRA 231

Query: 291 GFVSDLQ---IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
               + +   IG  L+DMYAKC  + Y  RVF+ M  ++ ++W+ +I G+   +   +A 
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291

Query: 348 ELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDV 405
            LF+ + +EGL       + S L  C+ L  +    ++H  I + G+ +DL   N+++ +
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y K G I+ +   F+ I  KD +S+ +++S  V NG A EA  +F  M   N+E D  T+
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATM 411

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
           VS + A S L+ L+ GK  +G +I +G  LE S+ +SL+DMYA+CG +D++ +VF+ +  
Sbjct: 412 VSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPA 471

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           +D++ W +MI   G+HG GK A  LF  M+ + FAPD +TF+ L+ ACSHSGL+ EGK +
Sbjct: 472 RDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHW 531

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
            + M   Y + P  EHY C+VDLL R   L+EAYQF++SM ++    VW ALLGACR+H 
Sbjct: 532 FDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHK 591

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           N +LG+ V++ + +L P   GN+VL+SN+F+A+ ++ +  +VR+  +  G KK+PG SWI
Sbjct: 592 NIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWI 651

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
           EI   +H+F+  D+SH  S +IY +L  I   +++  GY A T FVL ++EEEEK + L 
Sbjct: 652 EINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKL-GYQADTSFVLQDLEEEEKEKALL 710

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
            HSE+LAIA+GVL   E   I +TKNLRVC DCH+  K ++ +  R ++VRD NRFHHF+
Sbjct: 711 YHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFK 770

Query: 826 AGVCSCGDYW 835
            G CSCG++W
Sbjct: 771 NGQCSCGNFW 780



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 168/549 (30%), Positives = 282/549 (51%), Gaps = 19/549 (3%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A Q+FD++       +NA++ AY   G     ++ Y  M    ++ + +TFP V+
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KAC+ L DL  G  IH      G  +  F+  +L+ +Y +C  F  AR +F +M  + DV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR-DV 166

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           V WN++++ Y+  G    A+    +MQ   GL  NA T V+ L           G  IHA
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226

Query: 185 ATVKS--GQN-LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
             +++   QN  QV +  AL+ MYA+C ++  A  V + +  ++ V+W++++ GFV  D 
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSAS------GRLGNLLNGKELHAYAIKQGFVSD 295
             +A   F+++   G     +C ++A S +        L +L  G +LHA   K G  +D
Sbjct: 287 MTEAFNLFKDMLVEG-----LCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHAD 341

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           L   N+L+ MYAK   +N     F ++  +D IS+  +++G  QN    +A  +F+ +Q 
Sbjct: 342 LTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQA 401

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
             ++ D+  + S++ ACS L  +   K  HG +I +GL+ +  I N+++D+Y KCG ID 
Sbjct: 402 CNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDL 461

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           SR VF+ + ++DVVSW +MI+ Y  +GL  EA  LF  M       D +T +  ++A S 
Sbjct: 462 SRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSH 521

Query: 475 LSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWT 532
             ++ +GK     +  K G          +VD+ AR G LD A +    +  K D+ +W 
Sbjct: 522 SGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWG 581

Query: 533 SMINANGLH 541
           +++ A  +H
Sbjct: 582 ALLGACRIH 590



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 221/447 (49%), Gaps = 15/447 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           +Y +C     A  +F K+  R V  WNAML  Y ++G     +     M+   G+  +A 
Sbjct: 144 LYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAS 203

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD---FIVNSLVAMYAKCYDFRKARQLF 116
           T   ++   A    L  G  IH   L+   +  +    I  +L+ MYAKC     A ++F
Sbjct: 204 TLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVF 263

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL-VTNAYTFVAALQACEDSSF 175
             M  + DV  W+++I  +    +  EA  LF++M   GL   +A +  +AL+ C   + 
Sbjct: 264 HGMPVRNDVT-WSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLAD 322

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             +G ++HA   KSG +  +  +N+L++MYA+ G + EA     ++  KD++S+ ++L+G
Sbjct: 323 LHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSG 382

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            VQN    +A   F+++Q    +PD    V+ + A   L  L +GK  H   I +G   +
Sbjct: 383 CVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALE 442

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             I N+L+DMYAKC  ++   +VF +M A+D +SW T+IAGY  +    +A  LF  ++ 
Sbjct: 443 TSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKN 502

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKE-----IHGYIIRKGLSDLVILNAIVDVYGKCG 410
           +G   D +    ++ ACS    +++ K       H Y I   +   + +   VD+  + G
Sbjct: 503 QGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICM---VDLLARGG 559

Query: 411 NIDYSRNVFESIESK-DVVSWTSMISS 436
            +D +    +S+  K DV  W +++ +
Sbjct: 560 LLDEAYQFIQSMPLKADVRVWGALLGA 586



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 128/280 (45%), Gaps = 9/280 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + +A   FD+++ +   ++ A+L   V NG+       + +M+   +  D  T
Sbjct: 351 MYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIAT 410

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I AC+ L  L  G   HG V+  G      I NSL+ MYAKC     +RQ+FD+M 
Sbjct: 411 MVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP 470

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV WN++I+ Y   G   EA  LF  M+  G   +  TF+  + AC  S   T G 
Sbjct: 471 AR-DVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGK 529

Query: 181 E-IHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTGF 236
                 T K G    ++ Y+   ++ + AR G + EA   +  +  K  V  W ++L   
Sbjct: 530 HWFDTMTHKYGILPRMEHYI--CMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587

Query: 237 VQNDLYCKAMQFFRELQGAGQK--PDQVCTVNAVSASGRL 274
             +       Q  R +Q  G +   + V   N  SA+GR 
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRF 627



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 102/233 (43%), Gaps = 4/233 (1%)

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G +  +R VF+ I + D  ++ ++I +Y   G  + A++L+  M    V  +  T    L
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
            A S+L  L+ G+ ++      G + +  V+++L+D+Y RC     A  VF  +  +D++
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACSHSGLINEGKKFLE- 587
            W +M+     HG    AI     M+      P+  T ++LL   +  G + +G      
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 588 -IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
            +  C  Q +        L+D+  +   L  A +    M +      W AL+G
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV-TWSALIG 279


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 298/819 (36%), Positives = 473/819 (57%), Gaps = 43/819 (5%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKA 112
            +D F  P   K+ A L+ L     IHG  L+    +  T  + N+L+  YA+C D   A
Sbjct: 56  PLDHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAA 115

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
             LF+ M  + D V +NS+I+A     + L AL   R+M   G   +++T V+ L AC  
Sbjct: 116 LALFNAMPSR-DAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSH 174

Query: 173 SSFE-TLGMEIHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS--- 226
            + +  LG E HA  +K+G     + +  NAL++MYAR G + +A  +   ++  DS   
Sbjct: 175 LAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGG 234

Query: 227 --VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
             V+WN+M++  VQ+    +A++   ++   G +PD +   +A+ A  +L  L  G+E+H
Sbjct: 235 GVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMH 294

Query: 285 AYAIKQGFVSDLQ----IGNTLMDMYAKCCCVNYMGRVFYQMTA--QDFISWTTIIAGYA 338
           AY +K    SDL     + + L+DMYA    V    RVF  +    +    W  ++ GYA
Sbjct: 295 AYVLKD---SDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYA 351

Query: 339 QNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-L 396
           Q     +ALELF  ++ E G+      I  VL AC+  +  +  + +HGY++++G++D  
Sbjct: 352 QAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNP 411

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM--- 453
            + NA++D+Y + G+++ +R +F +IE +DVVSW ++I+  V  G  ++A +L   M   
Sbjct: 412 FVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQ 471

Query: 454 ---------------NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
                          +E  V  +++TL++ L   + L+   KGKE++G+ +R   + + +
Sbjct: 472 GRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIA 531

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           V S+LVDMYA+CG L ++  VF+ +  +++I W  +I A G+HG G  AI LF +M   +
Sbjct: 532 VGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSN 591

Query: 559 FA-PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
            A P+ +TF+A L ACSHSG+++ G +    M+ ++ + P P+ +AC VD+LGRA  L+E
Sbjct: 592 EAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDE 651

Query: 618 AYQFVRSMQI-EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           AY  + SM+  E     W + LGACR+H N  LGEI A++L +L+P    +YVL+ N+++
Sbjct: 652 AYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYS 711

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           A+  W+   +VR RMR  G+ K PG SWIE+   IH F+A + +H ES  ++  +  + E
Sbjct: 712 AAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWE 771

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           ++ R  GY   T  VLH++EE EK  +L  HSE+LAIA+G+L++  G+ IR+ KNLRVC 
Sbjct: 772 RM-RNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCN 830

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCH   K +SR+ GRE+V+RD  RFHHF  G CSCGDYW
Sbjct: 831 DCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 177/627 (28%), Positives = 309/627 (49%), Gaps = 43/627 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y +CG +  A  LF+ +  R   T+N+++ A       L  L+    M + G  + +FT 
Sbjct: 106 YARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTL 165

Query: 62  PCVIKACAML-KDLDCGAKIHGLVLKCGYDSTD--FIVNSLVAMYAKCYDFRKARQLFDR 118
             V+ AC+ L +DL  G + H   LK G+   D  F  N+L++MYA+      A+ LF  
Sbjct: 166 VSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGS 225

Query: 119 MGEKED----VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           +   +     VV WN+++S    SG+C EA+ +  +M   G+  +  TF +AL AC    
Sbjct: 226 VDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLE 285

Query: 175 FETLGMEIHAATVK-SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNS 231
             +LG E+HA  +K S      +VA+AL+ MYA   ++  A  V   +   ++    WN+
Sbjct: 286 MLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNA 345

Query: 232 MLTGFVQNDLYCKAMQFFRELQG-AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           M+ G+ Q  +  +A++ F  ++  AG  P +      + A  R       + +H Y +K+
Sbjct: 346 MVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKR 405

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG-YAQNNCHLKALEL 349
           G   +  + N LMD+YA+   +     +F  +  +D +SW T+I G   Q + H  A +L
Sbjct: 406 GMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIH-DAFQL 464

Query: 350 FRTVQLEGLDADV------------------MIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
            R +Q +G   D                   + + ++L  C+ L   ++ KEIHGY +R 
Sbjct: 465 VREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRH 524

Query: 392 GL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
            L SD+ + +A+VD+Y KCG +  SR VF+ +  ++V++W  +I +Y  +GL +EA+ LF
Sbjct: 525 ALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALF 584

Query: 451 YLMNEAN-VESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYA 508
             M  +N  + + +T ++AL+A S   ++ +G EL   + R  G      + +  VD+  
Sbjct: 585 DRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILG 644

Query: 509 RCGALDIANKVFNCVQT--KDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDH 563
           R G LD A  +   ++   + +  W+S + A  LH     G++A +  +++E +  +  H
Sbjct: 645 RAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEAS--H 702

Query: 564 ITFLALLYACSHSGLINEGKKFLEIMR 590
              L  +Y  S +GL  +  +    MR
Sbjct: 703 YVLLCNIY--SAAGLWEKSSEVRNRMR 727



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/467 (29%), Positives = 218/467 (46%), Gaps = 31/467 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRT-----VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS 55
           MY + G V DA+ LF  V         V TWN M+   V +G     +E    M   G+ 
Sbjct: 209 MYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVR 268

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLK-CGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
            D  TF   + AC+ L+ L  G ++H  VLK     +  F+ ++LV MYA       AR+
Sbjct: 269 PDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARR 328

Query: 115 LFDRM-GEKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACED 172
           +FD + G    + LWN+++  Y+ +G   EAL LF  M+   G+V +  T    L AC  
Sbjct: 329 VFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACAR 388

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
           S        +H   +K G     +V NAL+ +YAR G M  A  +   +E +D VSWN++
Sbjct: 389 SETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTL 448

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQ------------------KPDQVCTVNAVSASGRL 274
           +TG V       A Q  RE+Q  G+                   P+ V  +  +     L
Sbjct: 449 ITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAML 508

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
                GKE+H YA++    SD+ +G+ L+DMYAKC C+     VF ++  ++ I+W  +I
Sbjct: 509 AAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLI 568

Query: 335 AGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI-HGYIIRKG 392
             Y  +    +A+ LF R V       + +   + L ACS    + +  E+ H      G
Sbjct: 569 MAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHG 628

Query: 393 LSDLVILNA-IVDVYGKCGNIDYSRNVFESIES--KDVVSWTSMISS 436
           +     L+A  VD+ G+ G +D + ++  S+E   + V +W+S + +
Sbjct: 629 VQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGA 675


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 286/730 (39%), Positives = 440/730 (60%), Gaps = 8/730 (1%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           ARQ+FDR+    D   +N++I AYS  G    A+ L+R M R  +  N YTF   L+AC 
Sbjct: 53  ARQVFDRI-PAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACS 111

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
                  G  IHA    +G +  ++V+ ALI +Y RC +   A  V  ++  +D V+WN+
Sbjct: 112 ALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNA 171

Query: 232 MLTGFVQNDLYCKAMQFFRELQG-AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           ML G+  + +Y  A+    ++Q   G +P+    V+ +    + G L  G  +HAY ++ 
Sbjct: 172 MLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRA 231

Query: 291 GFVSDLQ---IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
               + +   IG  L+DMYAKC  + Y  RVF+ M  ++ ++W+ +I G+   +   +A 
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291

Query: 348 ELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDV 405
            LF+ + +EGL       + S L  C+ L  +    ++H  I + G+ +DL   N+++ +
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y K G I+ +   F+ I  KD +S+ +++S  V NG A EA  +F  M   N+E D  T+
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATM 411

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
           VS + A S L+ L+ GK  +G +I +G  LE S+ +SL+DMYA+CG +D++ +VF+ +  
Sbjct: 412 VSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPA 471

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           +D++ W +MI   G+HG GK A  LF  M+ + FAPD +TF+ L+ ACSHSGL+ EGK +
Sbjct: 472 RDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHW 531

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
            + M   Y + P  EHY C+VDLL R   L+EAYQF++SM ++    VW ALLGACR+H 
Sbjct: 532 FDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHK 591

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           N +LG+ V++ + +L P   GN+VL+SN+F+A+ ++ +  +VR+  +  G KK+PG SWI
Sbjct: 592 NIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWI 651

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
           EI   +H+F+  D+SH  S +IY +L  I   +++  GY A T FVL ++EEEEK + L 
Sbjct: 652 EINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKL-GYQADTSFVLQDLEEEEKEKALL 710

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
            HSE+LAIA+GVL   E   I +TKNLRVC DCH+  K ++ +  R ++VRD NRFHHF+
Sbjct: 711 YHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFK 770

Query: 826 AGVCSCGDYW 835
            G CSCG++W
Sbjct: 771 NGQCSCGNFW 780



 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 168/549 (30%), Positives = 282/549 (51%), Gaps = 19/549 (3%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A Q+FD++       +NA++ AY   G     ++ Y  M    ++ + +TFP V+
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KAC+ L DL  G  IH      G  +  F+  +L+ +Y +C  F  AR +F +M  + DV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR-DV 166

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           V WN++++ Y+  G    A+    +MQ   GL  NA T V+ L           G  IHA
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226

Query: 185 ATVKS--GQN-LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
             +++   QN  QV +  AL+ MYA+C ++  A  V + +  ++ V+W++++ GFV  D 
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSAS------GRLGNLLNGKELHAYAIKQGFVSD 295
             +A   F+++   G     +C ++A S +        L +L  G +LHA   K G  +D
Sbjct: 287 MTEAFNLFKDMLVEG-----LCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHAD 341

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           L   N+L+ MYAK   +N     F ++  +D IS+  +++G  QN    +A  +F+ +Q 
Sbjct: 342 LTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQA 401

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
             ++ D+  + S++ ACS L  +   K  HG +I +GL+ +  I N+++D+Y KCG ID 
Sbjct: 402 CNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDL 461

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           SR VF+ + ++DVVSW +MI+ Y  +GL  EA  LF  M       D +T +  ++A S 
Sbjct: 462 SRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSH 521

Query: 475 LSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWT 532
             ++ +GK     +  K G          +VD+ AR G LD A +    +  K D+ +W 
Sbjct: 522 SGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWG 581

Query: 533 SMINANGLH 541
           +++ A  +H
Sbjct: 582 ALLGACRIH 590



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 221/447 (49%), Gaps = 15/447 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           +Y +C     A  +F K+  R V  WNAML  Y ++G     +     M+   G+  +A 
Sbjct: 144 LYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAS 203

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD---FIVNSLVAMYAKCYDFRKARQLF 116
           T   ++   A    L  G  IH   L+   +  +    I  +L+ MYAKC     A ++F
Sbjct: 204 TLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVF 263

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL-VTNAYTFVAALQACEDSSF 175
             M  + DV  W+++I  +    +  EA  LF++M   GL   +A +  +AL+ C   + 
Sbjct: 264 HGMPVRNDVT-WSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLAD 322

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             +G ++HA   KSG +  +  +N+L++MYA+ G + EA     ++  KD++S+ ++L+G
Sbjct: 323 LHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSG 382

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            VQN    +A   F+++Q    +PD    V+ + A   L  L +GK  H   I +G   +
Sbjct: 383 CVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALE 442

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             I N+L+DMYAKC  ++   +VF +M A+D +SW T+IAGY  +    +A  LF  ++ 
Sbjct: 443 TSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKN 502

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKE-----IHGYIIRKGLSDLVILNAIVDVYGKCG 410
           +G   D +    ++ ACS    +++ K       H Y I   +   + +   VD+  + G
Sbjct: 503 QGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICM---VDLLARGG 559

Query: 411 NIDYSRNVFESIESK-DVVSWTSMISS 436
            +D +    +S+  K DV  W +++ +
Sbjct: 560 LLDEAYQFIQSMPLKADVRVWGALLGA 586



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 128/280 (45%), Gaps = 9/280 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + +A   FD+++ +   ++ A+L   V NG+       + +M+   +  D  T
Sbjct: 351 MYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIAT 410

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I AC+ L  L  G   HG V+  G      I NSL+ MYAKC     +RQ+FD+M 
Sbjct: 411 MVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP 470

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV WN++I+ Y   G   EA  LF  M+  G   +  TF+  + AC  S   T G 
Sbjct: 471 AR-DVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGK 529

Query: 181 E-IHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTGF 236
                 T K G    ++ Y+   ++ + AR G + EA   +  +  K  V  W ++L   
Sbjct: 530 HWFDTMTHKYGILPRMEHYI--CMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587

Query: 237 VQNDLYCKAMQFFRELQGAGQK--PDQVCTVNAVSASGRL 274
             +       Q  R +Q  G +   + V   N  SA+GR 
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRF 627



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 102/233 (43%), Gaps = 4/233 (1%)

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G +  +R VF+ I + D  ++ ++I +Y   G  + A++L+  M    V  +  T    L
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
            A S+L  L+ G+ ++      G + +  V+++L+D+Y RC     A  VF  +  +D++
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACSHSGLINEGKKFLE- 587
            W +M+     HG    AI     M+      P+  T ++LL   +  G + +G      
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 588 -IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
            +  C  Q +        L+D+  +   L  A +    M +      W AL+G
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV-TWSALIG 279


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 275/781 (35%), Positives = 445/781 (56%), Gaps = 4/781 (0%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D   F  +++ C+  K++D G ++H  V   G++  + +   L+ MYA+C    +A+Q+F
Sbjct: 3   DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           + + E++DV  W  +I  Y   G    ALG+F +MQ   ++    T+VA L AC  +   
Sbjct: 63  EIL-ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             GMEIH   ++ G    V+V  ALI MY +CG +  A     +LE++D VSW +M+   
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           VQ+D +  A   +R +Q  G  P+++      +A G    L  GK ++         SD+
Sbjct: 182 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDV 241

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
           ++ N+ ++M+     +    R+F  M  +D ++W  +I  Y QN    +A+ LF  +Q +
Sbjct: 242 RVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQD 301

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
           G+ A+ +    +L   + L  +++ K IH  +   G   D V+  A++ +YG+C     +
Sbjct: 302 GVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQA 361

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             +F  + SKDV++WT M  +Y  NG   EAL+LF  M        S TLV+ L   + L
Sbjct: 362 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 421

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           + L+KG++++  II   F +E  V ++L++MY +CG +  A  VF  +  +D+++W SM+
Sbjct: 422 AALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSML 481

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
            A   HG     + LF +M+ +    D ++F+++L A SHSG + +G ++   M  D+ +
Sbjct: 482 GAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSI 541

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQ-IEPTAEVWCALLGACRVHSNKELGEIVA 654
            P PE Y C+VDLLGRA  ++EA   V  +    P   +W  LLGACR H+  +  +  A
Sbjct: 542 TPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAA 601

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           +++LE DP + G YV++SNV+AA+  W  V ++R  MR  G+KK PG S IEI N++H F
Sbjct: 602 EQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEF 661

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           +  D+SH     IY +L  +  ++ R  GY+  T+ +LH+VE+E K  ML+ HSERLAIA
Sbjct: 662 LEGDRSHPRRHPIYAELDVLNSEM-RAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIA 720

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G++ +  G+ +R+ KNLRVC DCH+  K +S+L GRE++VRD +RFH+F+ G CSC DY
Sbjct: 721 FGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDY 780

Query: 835 W 835
           W
Sbjct: 781 W 781



 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 169/553 (30%), Positives = 287/553 (51%), Gaps = 17/553 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGSV +A+Q+F+ + ++ VF W  M+G Y   G+  R L  + +M+   +     T
Sbjct: 48  MYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVT 107

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++ ACA  + L  G +IHG +L+ G++   F+  +L+ MY KC   R A   F R+ 
Sbjct: 108 YVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL- 166

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  DVV W ++I+A     Q   A  L+R MQ  G+V N  T      A  D ++ + G 
Sbjct: 167 EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGK 226

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            ++           V V N+ + M+   G + +A  +   + ++D V+WN ++T +VQN+
Sbjct: 227 FVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNE 286

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +A++ F  LQ  G K + +  V  ++    L +L  GK +H    + G+  D  +  
Sbjct: 287 NFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVAT 346

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LM +Y +C       ++F  M ++D I+WT +   YAQN    +AL+LF+ +QLEG   
Sbjct: 347 ALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRP 406

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
               + +VL  C+ L  + + ++IH +II      ++V+  A++++YGKCG +  + +VF
Sbjct: 407 TSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVF 466

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  +D++ W SM+ +Y  +G  +E L+LF  M    V++D+++ VS LSA S    + 
Sbjct: 467 EKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVT 526

Query: 480 KGKE-----LNGFIIRKGFNLEGSVASSLVDMYARCG----ALDIANKVFNCVQTKDLIL 530
            G +     L  F I     L G V    VD+  R G    A+DI  K+  C+   D IL
Sbjct: 527 DGYQYFVAMLQDFSITPTPELYGCV----VDLLGRAGRIQEAVDIVLKLSGCL--PDGIL 580

Query: 531 WTSMINANGLHGR 543
           W +++ A   H +
Sbjct: 581 WMTLLGACRTHNK 593



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 168/334 (50%), Gaps = 1/334 (0%)

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           KPD    V  +       N+ +G+ +H +   +GF  +  +   L+ MYA+C  V    +
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF  +  +D  +WT +I  Y Q   + +AL +F  +Q E +    +   ++L AC+  + 
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 378 MSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           +    EIHG I+++G   D+ +  A++++Y KCG++  + + F+ +E +DVVSWT+MI++
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
            V +     A  L+  M    V  + ITL +  +A    + L +GK + G +       +
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             V +S V+M+   G L  A ++F  +  +D++ W  +I     +     A+ LF +++ 
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           +    + ITF+ +L   +    + +GK   E+++
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKGKVIHELVK 334


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 271/674 (40%), Positives = 412/674 (61%), Gaps = 6/674 (0%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKD 225
           LQ+  +S   T  +++HA     G      Y+A  L A YA CG M  A  +  Q+  K+
Sbjct: 29  LQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKN 88

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           S  WNSM+ G+  N+   +A+  + ++   GQKPD       + A G L     G+++HA
Sbjct: 89  SFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHA 148

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
             +  G   D+ +GN+++ MY K   V     VF +M  +D  SW T+++G+ +N     
Sbjct: 149 LVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARG 208

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV----ILNA 401
           A E+F  ++ +G   D   + ++L AC  +  +   KEIHGY++R G S  V    ++N+
Sbjct: 209 AFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNS 268

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           I+D+Y  C ++  +R +FE +  KDVVSW S+IS Y   G A +ALELF  M       D
Sbjct: 269 IIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPD 328

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
            +T++S L+A + +S L+ G  +  +++++G+ +   V ++L+ MYA CG+L  A +VF+
Sbjct: 329 EVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFD 388

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  K+L   T M+   G+HGRG+ AI +FY+M  +   PD   F A+L ACSHSGL++E
Sbjct: 389 EMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDE 448

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           GK+    M  DY ++P P HY+CLVDLLGRA +L+EAY  + +M+++P  +VW ALL AC
Sbjct: 449 GKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSAC 508

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           R+H N +L  I A+KL EL+P     YV +SN++AA R+W+DVE VR  +    L+K P 
Sbjct: 509 RLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPS 568

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            S++E+   +H F   D SH +SD+IY KL ++ E+L ++ GY   T  VL++VEEE K 
Sbjct: 569 YSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQL-KKAGYKPDTSLVLYDVEEEIKE 627

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
           +ML+ HSERLA+A+ ++ +  G+ IRITKNLRVC DCH+  K++S+L  RE+++RD  RF
Sbjct: 628 KMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRF 687

Query: 822 HHFEAGVCSCGDYW 835
           HHF  G+CSCG YW
Sbjct: 688 HHFRDGLCSCGGYW 701



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 241/443 (54%), Gaps = 11/443 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG +  A+ +FD++  +  F WN+M+  Y  N  P R L  Y +M   G   D FT+
Sbjct: 68  YAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTY 127

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+KAC  L   + G K+H LV+  G +   ++ NS+++MY K  D   AR +FDRM  
Sbjct: 128 PFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLV 187

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D+  WN+++S +  +G+   A  +F +M+R G V +  T +A L AC D     +G E
Sbjct: 188 R-DLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKE 246

Query: 182 IHAATVKSGQNLQV---YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           IH   V++G++ +V   ++ N++I MY  C  ++ A  +   L  KD VSWNS+++G+ +
Sbjct: 247 IHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEK 306

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                +A++ F  +   G  PD+V  ++ ++A  ++  L  G  + +Y +K+G+V ++ +
Sbjct: 307 CGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVV 366

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G  L+ MYA C  +    RVF +M  ++  + T ++ G+  +    +A+ +F  +  +G+
Sbjct: 367 GTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGV 426

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD--LVILNAIVDVYGKCGNIDYSR 416
             D  I  +VL ACS    + + KEI   + R    +      + +VD+ G+ G +D + 
Sbjct: 427 TPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAY 486

Query: 417 NVFESIESK---DVVSWTSMISS 436
            V E+++ K   DV  WT+++S+
Sbjct: 487 AVIENMKLKPNEDV--WTALLSA 507



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 248/462 (53%), Gaps = 9/462 (1%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           ++   L A YA C     A+ +FD++  K    LWNS+I  Y+ +     AL L+ +M  
Sbjct: 59  YLATKLAACYAVCGHMPYAQHIFDQIVLKNSF-LWNSMIRGYACNNSPSRALFLYLKMLH 117

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G   + +T+   L+AC D     +G ++HA  V  G    VYV N++++MY + G +  
Sbjct: 118 FGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEA 177

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V  ++  +D  SWN+M++GFV+N     A + F +++  G   D+   +  +SA G 
Sbjct: 178 ARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGD 237

Query: 274 LGNLLNGKELHAYAIKQ---GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
           + +L  GKE+H Y ++    G V +  + N+++DMY  C  V+   ++F  +  +D +SW
Sbjct: 238 VMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSW 297

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
            ++I+GY +     +ALELF  + + G   D + + SVL AC+ +  +     +  Y+++
Sbjct: 298 NSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVK 357

Query: 391 KG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
           +G + ++V+  A++ +Y  CG++  +  VF+ +  K++ + T M++ +  +G   EA+ +
Sbjct: 358 RGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISI 417

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMY 507
           FY M    V  D     + LSA S   ++ +GKE+  + + + +++E      S LVD+ 
Sbjct: 418 FYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIF-YKMTRDYSVEPRPTHYSCLVDLL 476

Query: 508 ARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAI 548
            R G LD A  V   ++ K +  +WT++++A  LH   K+A+
Sbjct: 477 GRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAV 518



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 172/363 (47%), Gaps = 12/363 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G V  A  +FD++  R + +WN M+  +V NGE     E +  MR  G   D  T
Sbjct: 168 MYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTT 227

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDS---TDFIVNSLVAMYAKCYDFRKARQLFD 117
              ++ AC  + DL  G +IHG V++ G        F++NS++ MY  C     AR+LF+
Sbjct: 228 LLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFE 287

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            +  K DVV WNS+IS Y   G   +AL LF  M  VG V +  T ++ L AC   S   
Sbjct: 288 GLRVK-DVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALR 346

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LG  + +  VK G  + V V  ALI MYA CG +  A  V  ++  K+  +   M+TGF 
Sbjct: 347 LGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFG 406

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            +    +A+  F E+ G G  PD+      +SA    G +  GKE+  Y + + +  + +
Sbjct: 407 IHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIF-YKMTRDYSVEPR 465

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
             +     Y+  C V+ +GR  Y   A   I    +          L A  L R V+L  
Sbjct: 466 PTH-----YS--CLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAV 518

Query: 358 LDA 360
           + A
Sbjct: 519 ISA 521


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 289/819 (35%), Positives = 470/819 (57%), Gaps = 52/819 (6%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P ++      KD+  G  IH  +++        + N LV +Y+KC  FR AR+L     
Sbjct: 53  YPKLLLQFTASKDVSSGMAIHARIIR---LGLLGLRNRLVNLYSKCQCFRVARKLVIDSS 109

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREM----------------------------- 151
           E  D+V W+++IS Y  +G+  EAL  + EM                             
Sbjct: 110 EP-DLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGK 168

Query: 152 --QRVGLVT---------NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANA 200
              RV LVT         N ++    L AC     E  GM++H   +K G +   + ANA
Sbjct: 169 QIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANA 228

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV---QNDLYCKAMQFFRELQGAGQ 257
           L+ MYA+ G    A  V Y++   D VSWN+++ G V   +NDL   A++   ++     
Sbjct: 229 LLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDL---ALKLLGKMGSYRV 285

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
            P      +A+ A   +G +  G++LH+  +K     D  +G  L+DMY+KC  +     
Sbjct: 286 APSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARM 345

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF  M  +D I W +II+GY+     ++A+ LF  +  EGL+ +   + ++L + +G + 
Sbjct: 346 VFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQA 405

Query: 378 MSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
               +++H   I+ G   D  + N+++D YGKC  ++ +  VFE   ++D+V++TSMI++
Sbjct: 406 NGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITA 465

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           Y   GL  EAL+++  M + +++ D+    S  +A ++LS  ++GK+++  +++ G   +
Sbjct: 466 YSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSD 525

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
               +SLV+MYA+CG++D A+ +FN +  + ++ W++MI     HG G+ A+ LFY+M  
Sbjct: 526 VFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLK 585

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
               P+HIT +++L AC+H+GL+ E ++F  +M   + + P  EHYAC+VD+LGR   L+
Sbjct: 586 NGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLD 645

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EA   V+ M  + +A VW ALLGA R+H N ELG   A+ LL L+P   G ++L++N++A
Sbjct: 646 EAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYA 705

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           ++  W +V +VR  M+ S +KK PG SWIE+ +K+++FI  D+SH  S EIY KL ++ E
Sbjct: 706 STGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRE 765

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           +L    GYV   +  LH+VE+ EK Q+L+ HSE+LA+A+G++ +  G+ IR+ KNLRVC+
Sbjct: 766 RLT-SAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCI 824

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCH+  K +S++  RE++VRD NRFHHF  G CSCGDYW
Sbjct: 825 DCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 179/623 (28%), Positives = 308/623 (49%), Gaps = 55/623 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC     A +L    S+  + +W+A++  YV NG     L TY  M +LG   + FT
Sbjct: 91  LYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFT 150

Query: 61  FPCVIK----------------------------------------ACAMLKDLDCGAKI 80
           F  V+K                                        ACA L+D + G K+
Sbjct: 151 FSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKV 210

Query: 81  HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
           HG ++K GYDS  F  N+L+ MYAK      A  +F  +  K D+V WN++I+      +
Sbjct: 211 HGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEI-PKPDIVSWNAVIAGCVLHEK 269

Query: 141 CLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANA 200
              AL L  +M    +  + +T  +AL+AC       LG ++H+A +K       +V   
Sbjct: 270 NDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVG 329

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           LI MY++CG + +A  V   +  KD + WNS+++G+       +AM  F  +   G + +
Sbjct: 330 LIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFN 389

Query: 261 QVCTVNAVSASGRLGNLLNG--KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           Q      + ++   G+  NG  +++H  +IK G+  D  + N+L+D Y KCC +    +V
Sbjct: 390 QTTLSTILKSTA--GSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKV 447

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F    A+D +++T++I  Y+Q     +AL+++  +Q   +  D  I  S+  AC+ L   
Sbjct: 448 FEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAY 507

Query: 379 SQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
            Q K+IH ++++ G LSD+   N++V++Y KCG+ID +  +F  I  + +VSW++MI   
Sbjct: 508 EQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGL 567

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             +G   +AL+LFY M +  +  + ITLVS LSA +   ++ + +   G ++ K F +  
Sbjct: 568 AQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFG-LMEKLFGITP 626

Query: 498 SVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLF 551
           +    + +VD+  R G LD A  +   +  +    +W +++ A  +H     G+ A ++ 
Sbjct: 627 TQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEML 686

Query: 552 YKMEAESFAPDHITFLALLYACS 574
             +E E  +  HI  LA +YA +
Sbjct: 687 LTLEPEK-SGTHI-LLANIYAST 707


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 295/843 (34%), Positives = 469/843 (55%), Gaps = 56/843 (6%)

Query: 44  ETYSRMRVLGISVDAFTF-PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAM 102
           +++  ++V   S  A    P  I  C  +  +     IH  +L  G  + + + + L++ 
Sbjct: 13  KSHQHLKVSLFSTSALEITPPFIHKCKTISQVKL---IHQKLLSFGILTLN-LTSHLIST 68

Query: 103 YAKCYDFRKARQLFDRMGEKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAY 161
           Y        A  L  R    +  V  WNS+I +Y  +G+  + L  F  M  +    + Y
Sbjct: 69  YISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNY 128

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           TF    +AC + S    G   HA +  +G    V+V NAL+AMY+RCG +++A  V  ++
Sbjct: 129 TFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEM 188

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNG 280
              D VSWNS++  + +      A++ F ++    G +PD +  VN +     +G    G
Sbjct: 189 PVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLG 248

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K+ H +A+    + ++ +GN L+DMYAK   ++    VF  M  +D +SW  ++AGY+Q 
Sbjct: 249 KQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQI 308

Query: 341 NCHLKALELFRTVQLEGLDADVMI-----------------------------------I 365
                A+ LF  +Q E +  DV+                                    +
Sbjct: 309 GRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGLS--------DLVILNAIVDVYGKCGNIDYSRN 417
            SVL  C+ +  +   KEIH Y I+  +         + +++N ++D+Y KC  +D +R 
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARA 428

Query: 418 VFESIESK--DVVSWTSMISSYVHNGLANEALELFYLMNEANVES--DSITLVSALSAAS 473
           +F+S+  K  DVV+WT MI  Y  +G AN+ALEL   M E + ++  ++ T+  AL A +
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488

Query: 474 SLSILKKGKELNGFIIRKGFN-LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           SL+ L  GK+++ + +R   N +   V++ L+DMYA+CG +  A  VF+ +  K+ + WT
Sbjct: 489 SLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWT 548

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           S++   G+HG G+ A+ +F +M    F  D +T L +LYACSHSG+I++G ++   M+ D
Sbjct: 549 SLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTD 608

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
           + + P PEHYACLVDLLGRA  L  A + +  M +EP   VW ALL  CR+H   ELGE 
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEY 668

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
            AKK+ EL   N G+Y L+SN++A + +WKDV ++R  MR  G+KK PG SW+E      
Sbjct: 669 AAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTT 728

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLA 772
           +F   DK+H  + EIY+ L++  +++ ++ GYV +T F LH+V++EEK  +L+ HSE+LA
Sbjct: 729 TFFVGDKTHPHAKEIYQVLSDHMQRI-KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLA 787

Query: 773 IAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           +AYG+L + +G+ IRITKNLRVC DCH+    +SR+   E+++RD++RFHHF+ G+CSC 
Sbjct: 788 LAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCK 847

Query: 833 DYW 835
            YW
Sbjct: 848 GYW 850



 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 184/601 (30%), Positives = 295/601 (49%), Gaps = 62/601 (10%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
           S   V+ WN+++ +Y +NG   + L ++  M  L  + D +TFP V KAC  +  + CG 
Sbjct: 88  SDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGD 147

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
             H L    G+ S  F+ N+LVAMY++C     AR++FD M    DVV WNSII +Y+  
Sbjct: 148 SSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEM-PVWDVVSWNSIIESYAKL 206

Query: 139 GQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
           G+   AL +F +M    G   +  T V  L  C      +LG + H   V S     ++V
Sbjct: 207 GKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFV 266

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ---- 253
            N L+ MYA+ G M EA  V   +  KD VSWN+M+ G+ Q   +  A++ F ++Q    
Sbjct: 267 GNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKI 326

Query: 254 -------------------------------GAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
                                           +G KP++V  ++ +S    +G L++GKE
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386

Query: 283 LHAYAI-------KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ--DFISWTTI 333
           +H YAI       K G   +  + N L+DMYAKC  V+    +F  ++ +  D ++WT +
Sbjct: 387 IHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVM 446

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIR- 390
           I GY+Q+    KALEL   +  E      +   I   L+AC+ L  +S  K+IH Y +R 
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRN 506

Query: 391 -KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
            +    L + N ++D+Y KCG+I  +R VF+++  K+ V+WTS+++ Y  +G   EAL +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGI 566

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYA 508
           F  M     + D +TL+  L A S   ++ +G E  N      G +      + LVD+  
Sbjct: 567 FEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLG 626

Query: 509 RCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           R G L+ A ++   +  +   ++W ++++   +HG          K+E   +A   IT L
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHG----------KVELGEYAAKKITEL 676

Query: 568 A 568
           A
Sbjct: 677 A 677



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 225/491 (45%), Gaps = 62/491 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MY +CGS+ DA ++FD++    V +WN+++ +Y   G+P   LE +S+M    G   D  
Sbjct: 171 MYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDI 230

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK-------------- 105
           T   V+  CA +     G + HG  +        F+ N LV MYAK              
Sbjct: 231 TLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNM 290

Query: 106 -----------------CYDFRKARQLFDRMGE---KEDVVLWNSIISAYSASGQCLEAL 145
                               F  A +LF++M E   K DVV W++ IS Y+  G   EAL
Sbjct: 291 PVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV-------KSGQNLQVYVA 198
           G+ R+M   G+  N  T ++ L  C        G EIH   +       K+G   +  V 
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVI 410

Query: 199 NALIAMYARCGKMTEAAGVLYQLENK--DSVSWNSMLTGFVQNDLYCKAMQFFREL--QG 254
           N LI MYA+C K+  A  +   L  K  D V+W  M+ G+ Q+    KA++   E+  + 
Sbjct: 411 NQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK-QGFVSDLQIGNTLMDMYAKCCCVN 313
              +P+      A+ A   L  L  GK++HAYA++ Q     L + N L+DMYAKC  + 
Sbjct: 471 CQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIG 530

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
               VF  M  ++ ++WT+++ GY  +    +AL +F  ++  G   D + +  VL ACS
Sbjct: 531 DARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACS 590

Query: 374 -------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE--SIES 424
                  G++  ++ K   G  +  G      L   VD+ G+ G ++ +  + E   +E 
Sbjct: 591 HSGMIDQGMEYFNRMKTDFG--VSPGPEHYACL---VDLLGRAGRLNAALRLIEEMPMEP 645

Query: 425 KDVVSWTSMIS 435
             VV W +++S
Sbjct: 646 PPVV-WVALLS 655



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 150/312 (48%), Gaps = 28/312 (8%)

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV 397
           A+++ HLK + LF T  LE       I    +  C   K +SQ K IH  ++  G+  L 
Sbjct: 12  AKSHQHLK-VSLFSTSALE-------ITPPFIHKC---KTISQVKLIHQKLLSFGILTLN 60

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKD--VVSWTSMISSYVHNGLANEALELFYLMNE 455
           + + ++  Y   G + ++ ++       D  V  W S+I SY +NG AN+ L  F LM+ 
Sbjct: 61  LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHS 120

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
            +   D+ T      A   +S ++ G   +      GF     V ++LV MY+RCG+L  
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSD 180

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACS 574
           A KVF+ +   D++ W S+I +    G+ K+A+++F KM  E  F PD IT + +L  C+
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240

Query: 575 HSGLINEGKKF------LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
             G  + GK+F       E+++  +  +       CLVD+  +   ++EA     +M ++
Sbjct: 241 SVGTRSLGKQFHGFAVTSEMIQNMFVGN-------CLVDMYAKFGMMDEANTVFSNMPVK 293

Query: 629 PTAEVWCALLGA 640
                W A++  
Sbjct: 294 DVVS-WNAMVAG 304



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 18/179 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + DA  +FD + ++   TW +++  Y  +G     L  +  MR +G  +D  T
Sbjct: 522 MYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVT 581

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-------LVAMYAKCYDFRKAR 113
              V+ AC+    +D G +    +       TDF V+        LV +  +      A 
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRM------KTDFGVSPGPEHYACLVDLLGRAGRLNAAL 635

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN---AYTFVAALQA 169
           +L + M  +   V+W +++S     G+    LG +   +   L +N   +YT ++ + A
Sbjct: 636 RLIEEMPMEPPPVVWVALLSCCRIHGKV--ELGEYAAKKITELASNNDGSYTLLSNMYA 692


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 278/779 (35%), Positives = 455/779 (58%), Gaps = 77/779 (9%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+  V++ CA  K L  G K+H ++        + +   LV++YA C D ++ R++FD M
Sbjct: 101 TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTM 160

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK++V LWN ++S Y+  G   E++ LF+ M   G+                       
Sbjct: 161 -EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE---------------------- 197

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY-QLENKDSVSWNSMLTGFVQ 238
                                        GK  E+A  L+ +L ++D +SWNSM++G+V 
Sbjct: 198 -----------------------------GKRPESASELFDKLCDRDVISWNSMISGYVS 228

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N L  + ++ ++++   G   D    ++ +      G L  GK +H+ AIK  F   +  
Sbjct: 229 NGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINF 288

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            NTL+DMY+KC  ++   RVF +M  ++ +SWT++IAGY ++     A+ L + ++ EG+
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGV 348

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             DV+   S+L AC+    +   K++H YI    + S+L + NA++D+Y KCG++D + +
Sbjct: 349 KLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANS 408

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF ++  KD++SW +MI                       ++ DS T+   L A +SLS 
Sbjct: 409 VFSTMVVKDIISWNTMI---------------------GELKPDSRTMACILPACASLSA 447

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L++GKE++G+I+R G++ +  VA++LVD+Y +CG L +A  +F+ + +KDL+ WT MI+ 
Sbjct: 448 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISG 507

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G+HG G  AI  F +M      PD ++F+++LYACSHSGL+ +G +F  IM+ D+ ++P
Sbjct: 508 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEP 567

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHYAC+VDLL R  +L +AY+F+ ++ I P A +W ALL  CR++ + EL E VA+++
Sbjct: 568 KLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERV 627

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA- 716
            EL+P N G YVL++N++A + KW++V+++R ++   GL+K PG SWIEI  K++ F++ 
Sbjct: 628 FELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSG 687

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            + SH  S +I   L ++  K++ EG Y  +T++ L N +E +K   L GHSE+LA+A+G
Sbjct: 688 NNSSHPHSKKIESLLKKMRRKMKEEG-YFPKTKYALINADEMQKEMALCGHSEKLAMAFG 746

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +L       +R+TKNLRVC DCH   K +S+   RE+V+RD+NRFHHF+ G CSC  +W
Sbjct: 747 LLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 211/428 (49%), Gaps = 27/428 (6%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A +LFDK+  R V +WN+M+  YVSNG   R LE Y +M  LGI VD  T   V+  CA 
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
              L  G  +H L +K  ++      N+L+ MY+KC D   A ++F++MGE+ +VV W S
Sbjct: 264 SGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER-NVVSWTS 322

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I+ Y+  G+   A+ L ++M++ G+  +     + L AC  S     G ++H     + 
Sbjct: 323 MIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANN 382

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               ++V NAL+ MY +CG M  A  V   +  KD +SWN+M+                 
Sbjct: 383 MESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGEL-------------- 428

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
                  KPD       + A   L  L  GKE+H Y ++ G+ SD  + N L+D+Y KC 
Sbjct: 429 -------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            +     +F  + ++D +SWT +I+GY  +    +A+  F  ++  G++ D +   S+L 
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS---DLVILNAIVDVYGKCGNIDYSRNVFESIE-SKD 426
           ACS    + Q      YI++   +    L     +VD+  + GN+  +    E++  + D
Sbjct: 542 ACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPD 600

Query: 427 VVSWTSMI 434
              W +++
Sbjct: 601 ATIWGALL 608



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 153/333 (45%), Gaps = 30/333 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F+K+ +R V +W +M+  Y  +G     +    +M   G+ +D   
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVA 354

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA    LD G  +H  +     +S  F+ N+L+ MY KC     A  +F  M 
Sbjct: 355 TTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMV 414

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D++ WN++I                       L  ++ T    L AC   S    G 
Sbjct: 415 VK-DIISWNTMIGE---------------------LKPDSRTMACILPACASLSALERGK 452

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   +++G +   +VANAL+ +Y +CG +  A  +   + +KD VSW  M++G+  + 
Sbjct: 453 EIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHG 512

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E++ AG +PD+V  ++ + A    G L  G     Y +K  F  + +   
Sbjct: 513 YGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPK--- 568

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
             ++ YA  C V+ + R      A +FI    I
Sbjct: 569 --LEHYA--CMVDLLSRTGNLSKAYEFIETLPI 597



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 6/170 (3%)

Query: 385 HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           +G  I K  S     + I   +  C  I  S     +I+ + V  + + I  +   G   
Sbjct: 28  NGCFIHKPTSKATFFSPI---FSSCLPIRISATPTRTID-RQVTDYNAKILHFCQLGNLE 83

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
            A+EL  +  ++ +E+ + + V  L A S    L  GK+++  I      ++  +   LV
Sbjct: 84  NAMELVCMCQKSELETKTYSSVLQLCAGSK--SLTDGKKVHSIIKSNNVAVDEVLGLKLV 141

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            +YA CG L    +VF+ ++ K++ LW  M++     G  K +I LF  M
Sbjct: 142 SLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIM 191


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 282/839 (33%), Positives = 477/839 (56%), Gaps = 21/839 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGKC  V +A QLFD++  R V +W  ++ AY   G     LE +  M + G   + FT
Sbjct: 59  LYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFT 118

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               +++C+ L++ + G +   LV K G+DS   + ++L+  Y+KC   ++A ++F+ M 
Sbjct: 119 LSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMN 178

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL-- 178
              D+V W  ++S++  +G   +AL L+  M + G+  N +TFV  L A   SSF  L  
Sbjct: 179 NG-DIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAA---SSFLGLNY 234

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  +HA  +     L + +  AL+ MY +C  + +A  V       D   W ++++GF Q
Sbjct: 235 GKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQ 294

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +  + +A+  F E++ +G  P+       ++A   +  L  GK++H+  +  G  +D+ +
Sbjct: 295 SLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSV 354

Query: 299 GNTLMDMYAKCC-CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           GN+L+DMY KC   +    R F  + + + ISWT++IAG++++    +++++F  +Q  G
Sbjct: 355 GNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVG 414

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +  +   + ++L AC  +K ++QT+++HGYII+    +D+V+ NA+VD Y   G +D + 
Sbjct: 415 VRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAW 474

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           +V   ++ +DV+++TS+ +     G    AL +   MN+ +V  D  +L S LSAA+ + 
Sbjct: 475 HVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIP 534

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           I++ GK+L+ + ++ G     SV++ LVD+Y +CG +  A++ F  +   D + W  +I 
Sbjct: 535 IMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIF 594

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
               +G    A+  F  M      PD IT L +LYACSH GL++ G  + + MR  + + 
Sbjct: 595 GLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIR 654

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  +HY CLVDLLGRA  LEEA   + +M  +P A ++  LLGAC++H N  LGE +A++
Sbjct: 655 PQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQ 714

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
            LELDP +P  YVL++N++  S + +  E+ R  MR  G++K PG SW+E  N +H F A
Sbjct: 715 GLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTA 774

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D SH +  +I++K+  +  +   +G +  + + + H             HSE+LA+A+G
Sbjct: 775 GDTSHPQIGKIHEKIESLIAQFRNQGIWYQENRALAH-------------HSEKLAVAFG 821

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ +   + IRI KN+R+C DCH F   V+RL  RE++VRD NRFH F+ G CSC  YW
Sbjct: 822 LISTPPKAPIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 170/564 (30%), Positives = 286/564 (50%), Gaps = 6/564 (1%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G  IH  ++K G+    F+ N+L+++Y KC+   +ARQLFD M  + DV  W  ++SAY 
Sbjct: 34  GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCR-DVASWTMLMSAYG 92

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
             G   EAL LF  M   G   N +T   AL++C        G    A   KSG +    
Sbjct: 93  KIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPV 152

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           + +ALI  Y++CG   EA  V   + N D VSW  M++ FV+   + +A+Q +  +   G
Sbjct: 153 LGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTG 212

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             P++   V  ++AS  LG L  GK +HA+ +      +L +   L+DMY KC  +    
Sbjct: 213 VAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAV 271

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           +V       D   WT II+G+ Q+    +A+  F  ++  G+  +      +L ACS + 
Sbjct: 272 KVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSIL 331

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGN-IDYSRNVFESIESKDVVSWTSMI 434
            +   K+IH  ++  GL +D+ + N++VD+Y KC N I+ +   F  I S +V+SWTS+I
Sbjct: 332 ALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLI 391

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           + +  +GL  E++++F  M    V  +S TL + L A  ++  L + ++L+G+II+   +
Sbjct: 392 AGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNAD 451

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            +  V ++LVD YA  G +D A  V + ++ +D+I +TS+       G  ++A+++   M
Sbjct: 452 NDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHM 511

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
             +    D  +  + L A +   ++  GK+ L        L  W      LVDL G+   
Sbjct: 512 NKDDVRMDGFSLASFLSAAAGIPIMETGKQ-LHCYSVKSGLGSWISVSNGLVDLYGKCGC 570

Query: 615 LEEAYQFVRSMQIEPTAEVWCALL 638
           + +A++    +  EP A  W  L+
Sbjct: 571 IHDAHRSFLEIT-EPDAVSWNGLI 593


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 281/786 (35%), Positives = 465/786 (59%), Gaps = 11/786 (1%)

Query: 54  ISVDAFTFPC--VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
           I  + +  P   +++ C+ LK+L    +I  LV K G     F    LV+++ +     +
Sbjct: 31  IPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A ++F+ +  K +V L+++++  ++      +AL  F  M+   +    Y F   L+ C 
Sbjct: 88  AARVFEPIDSKLNV-LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCG 146

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           D +   +G EIH   VKSG +L ++    L  MYA+C ++ EA  V  ++  +D VSWN+
Sbjct: 147 DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT 206

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++ G+ QN +   A++  + +     KP  +  V+ + A   L  +  GKE+H YA++ G
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F S + I   L+DMYAKC  +    ++F  M  ++ +SW ++I  Y QN    +A+ +F+
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326

Query: 352 TVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
            +  EG+   DV ++G+ L AC+ L  + + + IH   +  GL  ++ ++N+++ +Y KC
Sbjct: 327 KMLDEGVKPTDVSVMGA-LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
             +D + ++F  ++S+ +VSW +MI  +  NG   +AL  F  M    V+ D+ T VS +
Sbjct: 386 KEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVI 445

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           +A + LSI    K ++G ++R   +    V ++LVDMYA+CGA+ IA  +F+ +  + + 
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            W +MI+  G HG GK A++LF +M+  +  P+ +TFL+++ ACSHSGL+  G K   +M
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMM 565

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
           + +Y ++   +HY  +VDLLGRA  L EA+ F+  M ++P   V+ A+LGAC++H N   
Sbjct: 566 KENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNF 625

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
            E  A++L EL+P + G +VL++N++ A+  W+ V QVR+ M   GL+KTPG S +EI N
Sbjct: 626 AEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKN 685

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           ++HSF +   +H +S +IY  L ++   + +E GYV  T  VL  VE + K Q+L  HSE
Sbjct: 686 EVHSFFSGSTAHPDSKKIYAFLEKLICHI-KEAGYVPDTNLVL-GVENDVKEQLLSTHSE 743

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           +LAI++G+L +T G+ I + KNLRVC DCH+  K +S + GRE+VVRD  RFHHF+ G C
Sbjct: 744 KLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGAC 803

Query: 830 SCGDYW 835
           SCGDYW
Sbjct: 804 SCGDYW 809



 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 160/545 (29%), Positives = 294/545 (53%), Gaps = 6/545 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++ + GSV +A ++F+ +  +    ++ ML  +    +  + L+ + RMR   +    + 
Sbjct: 78  LFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYN 137

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++K C    +L  G +IHGL++K G+    F +  L  MYAKC    +AR++FDRM 
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D+V WN+I++ YS +G    AL + + M    L  +  T V+ L A       ++G 
Sbjct: 198 ER-DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGK 256

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   ++SG +  V ++ AL+ MYA+CG +  A  +   +  ++ VSWNSM+  +VQN+
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +AM  F+++   G KP  V  + A+ A   LG+L  G+ +H  +++ G   ++ + N
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MY KC  V+    +F ++ ++  +SW  +I G+AQN   + AL  F  ++   +  
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP 436

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     SV+ A + L      K IHG ++R  L  ++ +  A+VD+Y KCG I  +R +F
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +  + V +W +MI  Y  +G    ALELF  M +  ++ + +T +S +SA S   +++
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE 556

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMIN 536
            G +   +++++ +++E S+    ++VD+  R G L+ A      +  K  + ++ +M+ 
Sbjct: 557 AGLKC-FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615

Query: 537 ANGLH 541
           A  +H
Sbjct: 616 ACQIH 620


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/674 (39%), Positives = 415/674 (61%), Gaps = 4/674 (0%)

Query: 165 AALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
           + L+AC   S+  LG EIH   +K G +  V+V NAL+ MY  C  +  A  V  ++  +
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
           D VSW++M+    +N  +  A++  RE+     +P +V  V+ V+      N+  GK +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 285 AYAIKQGFVSDLQIGNT--LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           AY I+      + +  T  L+DMYAKC  +    ++F  +T +  +SWT +IAG  ++N 
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 278

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNA 401
             +  +LF  +Q E +  + + + S+++ C     +   K++H YI+R G S  L +  A
Sbjct: 279 LEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATA 338

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           +VD+YGKC +I  +R +F+S +++DV+ WT+M+S+Y      ++A  LF  M  + V   
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPT 398

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
            +T+VS LS  +    L  GK ++ +I ++   ++  + ++LVDMYA+CG ++ A ++F 
Sbjct: 399 KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFI 458

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
              ++D+ +W ++I    +HG G+ A+D+F +ME +   P+ ITF+ LL+ACSH+GL+ E
Sbjct: 459 EAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTE 518

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           GKK  E M   + L P  EHY C+VDLLGRA  L+EA++ ++SM I+P   VW AL+ AC
Sbjct: 519 GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 578

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           R+H N +LGE+ A +LLE++P N G  VL+SN++AA+ +W D   VR  M+  G+KK PG
Sbjct: 579 RLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPG 638

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            S IE+   +H F+  D+SH +   I + LAE+  KL  E GYV  T  VL N++EEEK 
Sbjct: 639 HSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLN-EAGYVPDTSTVLLNIDEEEKE 697

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             L  HSE+LA+A+G++ +   + IRI KNLRVC DCH+  KL+S+++GR ++VRD NRF
Sbjct: 698 TALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRF 757

Query: 822 HHFEAGVCSCGDYW 835
           HHF  G CSCGDYW
Sbjct: 758 HHFREGYCSCGDYW 771



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 266/509 (52%), Gaps = 11/509 (2%)

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           F  P V+KAC  +     G +IHG VLK G D   F+ N+L+ MY +C     AR +FD+
Sbjct: 95  FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M E+ DVV W+++I + S + +   AL L REM  + +  +    V+ +    D++   +
Sbjct: 155 MMER-DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213

Query: 179 GMEIHAATVKSGQN--LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           G  +HA  +++  N  + V    AL+ MYA+CG +  A  +   L  K  VSW +M+ G 
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           ++++   +  + F  +Q     P+++  ++ +   G  G L  GK+LHAY ++ GF   L
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +   L+DMY KC  +     +F     +D + WT +++ YAQ NC  +A  LF  ++  
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYS 415
           G+    + I S+L  C+    +   K +H YI ++ +    ILN A+VD+Y KCG+I+ +
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAA 453

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             +F    S+D+  W ++I+ +  +G   EAL++F  M    V+ + IT +  L A S  
Sbjct: 454 GRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHA 513

Query: 476 SILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWT 532
            ++ +GK+L   ++   F L   +     +VD+  R G LD A+++   +  K + I+W 
Sbjct: 514 GLVTEGKKLFEKMVHT-FGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWG 572

Query: 533 SMINANGLHGR---GKVAIDLFYKMEAES 558
           +++ A  LH     G++A     ++E E+
Sbjct: 573 ALVAACRLHKNPQLGELAATQLLEIEPEN 601



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 225/442 (50%), Gaps = 8/442 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYG+C  V  A  +FDK+ +R V +W+ M+ +   N E    LE    M  + +      
Sbjct: 138 MYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVA 197

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI--VNSLVAMYAKCYDFRKARQLFDR 118
              ++   A   ++  G  +H  V++   +    +    +L+ MYAKC     ARQLF+ 
Sbjct: 198 MVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNG 257

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           + +K  VV W ++I+    S +  E   LF  MQ   +  N  T ++ +  C  +    L
Sbjct: 258 LTQKT-VVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQL 316

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++HA  +++G ++ + +A AL+ MY +C  +  A  +    +N+D + W +ML+ + Q
Sbjct: 317 GKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQ 376

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            +   +A   F +++ +G +P +V  V+ +S     G L  GK +H+Y  K+    D  +
Sbjct: 377 ANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCIL 436

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
              L+DMYAKC  +N  GR+F +  ++D   W  II G+A +    +AL++F  ++ +G+
Sbjct: 437 NTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGV 496

Query: 359 DA-DVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GL-SDLVILNAIVDVYGKCGNIDYS 415
              D+  IG +L ACS    +++ K++   ++   GL   +     +VD+ G+ G +D +
Sbjct: 497 KPNDITFIG-LLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEA 555

Query: 416 RNVFESIESK-DVVSWTSMISS 436
             + +S+  K + + W +++++
Sbjct: 556 HEMIKSMPIKPNTIVWGALVAA 577


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 279/771 (36%), Positives = 451/771 (58%), Gaps = 7/771 (0%)

Query: 5   CGSVLDAEQLFDKVSQRTV-FTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           CGS +       + +   V    NA +  +   G+    ++  SR +   + ++  T+  
Sbjct: 5   CGSSVGVSATLSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCS 62

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           V++ CA LK L+ G ++H ++   G    + +   LV MY  C D  K R++FD +   +
Sbjct: 63  VLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGI-LND 121

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            + LWN ++S Y+  G   E++GLF +MQ +G+  ++YTF   L+    S+       +H
Sbjct: 122 KIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVH 181

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              +K G      V N+LIA Y +CG++  A  +  +L ++D VSWNSM++G   N    
Sbjct: 182 GYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSR 241

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
             ++FF ++   G   D    VN + A   +GNL  G+ LHAY +K GF   +   NTL+
Sbjct: 242 NGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLL 301

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMY+KC  +N    VF +M     +SWT+IIA + +   H +A+ LF  +Q +GL  D+ 
Sbjct: 302 DMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIY 361

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            + SV+ AC+    + + +E+H +I +  + S+L + NA++++Y KCG+++ +  +F  +
Sbjct: 362 AVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQL 421

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             K++VSW +MI  Y  N L NEAL+LF  M +  ++ D +T+   L A + L+ L+KG+
Sbjct: 422 PVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGR 480

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           E++G I+RKG+  +  VA +LVDMY +CG L +A ++F+ +  KD+ILWT MI   G+HG
Sbjct: 481 EIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHG 540

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
            GK AI  F KM      P+  +F ++LYAC+HSGL+ EG K  + M+ +  ++P  EHY
Sbjct: 541 FGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHY 600

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
           AC+VDLL R+ +L  AY+F+ +M I+P A +W ALL  CR+H + EL E VA+ + EL+P
Sbjct: 601 ACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEP 660

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
            N   YVL++NV+A + KW++V++++ R+   GLK   G SWIE+  K + F A D SH 
Sbjct: 661 ENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHP 720

Query: 723 ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAI 773
           ++  I   L ++T K+ R GGY  + ++ L N ++  K  +L  HSE+LA+
Sbjct: 721 QAKMIDSLLRKLTMKMNR-GGYSNKIKYALINADDRLKEVLLCAHSEKLAM 770



 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 191/579 (32%), Positives = 315/579 (54%), Gaps = 12/579 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG ++   ++FD +    +F WN ++  Y   G     +  + +M+ LGI  D++T
Sbjct: 101 MYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYT 160

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F CV+K  A    +    ++HG VLK G+ S + +VNSL+A Y KC +   AR LFD + 
Sbjct: 161 FTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELS 220

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ DVV WNS+IS  + +G     L  F +M  +G+  ++ T V  L AC +    TLG 
Sbjct: 221 DR-DVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGR 279

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  VK+G +  V   N L+ MY++CG +  A  V  ++     VSW S++   V+  
Sbjct: 280 ALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREG 339

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L+ +A+  F E+Q  G +PD     + V A     +L  G+E+H +  K    S+L + N
Sbjct: 340 LHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSN 399

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LM+MYAKC  +     +F Q+  ++ +SW T+I GY+QN+   +AL+LF  +Q + L  
Sbjct: 400 ALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-LKP 458

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D + +  VL AC+GL  + + +EIHG+I+RKG  SDL +  A+VD+Y KCG +  ++ +F
Sbjct: 459 DDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLF 518

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + I  KD++ WT MI+ Y  +G   EA+  F  M  A +E +  +  S L A +   +LK
Sbjct: 519 DMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLK 578

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           +G +L    ++   N+E  +   + +VD+  R G L  A K    +  K D  +W ++++
Sbjct: 579 EGWKLFDS-MKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLS 637

Query: 537 ANGLHGRGKVA---IDLFYKMEAESFAPDHITFLALLYA 572
              +H   ++A    +  +++E E+    +   LA +YA
Sbjct: 638 GCRIHHDVELAEKVAEHIFELEPEN--TRYYVLLANVYA 674


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 281/832 (33%), Positives = 456/832 (54%), Gaps = 3/832 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC     A  +  K+  R V +W A++   V+ G     +  +  M+  GI  + FT
Sbjct: 156 VYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFT 215

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               +KAC++   LD G ++H    K G     F+ ++LV +YAKC +   A ++F  M 
Sbjct: 216 LATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP 275

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DV  WN +++ Y+  G     L LF  M  + +  N +T    L+ C +S     G 
Sbjct: 276 EQNDVT-WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQ 334

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH+  +K G     ++   L+ MY++CG   +A GV   ++  D V W++++T   Q  
Sbjct: 335 VIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQG 394

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              ++++ F  ++     P+Q    + +SA+   GNL  G+ +HA   K GF +D+ + N
Sbjct: 395 QSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSN 454

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MY K  CV+   +++  M  +D ISW   ++G      + + L +F  +  EG   
Sbjct: 455 ALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIP 514

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVF 419
           ++    S+L +CS L  +   +++H +II+  L D   +  A++D+Y KC  ++ +   F
Sbjct: 515 NMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAF 574

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  +D+ +WT +I++Y       +AL  F  M +  V+ +  TL   LS  SSL+ L+
Sbjct: 575 NRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLE 634

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G++L+  + + G   +  V S+LVDMYA+CG ++ A  +F  +  +D I W ++I    
Sbjct: 635 GGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYA 694

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            +G+G  A+  F  M  E  +PD +TF  +L ACSH GL+ EGK+    M  D+ + P  
Sbjct: 695 QNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTV 754

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           +H AC+VD+LGR    +E   F++ MQ+   A +W  +LGA ++H+N  LGE  A KL E
Sbjct: 755 DHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFE 814

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L P    +Y+L+SN+FA   +W DV++VR  M   G+KK PG SW+E   ++H+F++ D 
Sbjct: 815 LQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDY 874

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH +  EI+ KL E+  +L     YV +T++VLHNV E EK + L  HSERLA+ + ++ 
Sbjct: 875 SHPQIQEIHLKLDELDRELA-SIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALIS 933

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           ++    IRI KNLR+C DCH   K +S +  +E+VVRD  RFHHF+ G CSC
Sbjct: 934 TSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 305/629 (48%), Gaps = 10/629 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +++ CA  + L     IHGL++K   +    +  SLV +YAKC     AR +  +M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ DVV W ++I    A G   +++ LF+EMQ  G++ N +T    L+AC       LG 
Sbjct: 175 DR-DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGK 233

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA   K G  L ++V +AL+ +YA+CG++  A+ +   +  ++ V+WN +L G+ Q  
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                ++ F  +     K ++      +       NL  G+ +H+  IK G+  +  IG 
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353

Query: 301 TLMDMYAKC-CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            L+DMY+KC   ++ +G VF  +   D + W+ +I    Q     ++++LF  ++L    
Sbjct: 354 GLVDMYSKCGLAIDAIG-VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            +   I S+L A +    +   + IH  + + G  +D+ + NA+V +Y K G +     +
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           +ES+  +D++SW + +S     G+ +  L +FY M E     +  T +S L + S L  +
Sbjct: 473 YESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDV 532

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             G++++  II+   +    V ++L+DMYA+C  L+ A+  FN +  +DL  WT +I   
Sbjct: 533 HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY 592

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDP 597
               +G+ A++ F +M+ E   P+  T    L  CS    +  G++    + +  +  D 
Sbjct: 593 AQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDM 652

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
           +    + LVD+  +   +EEA     ++ I      W  ++  C    N +  + +    
Sbjct: 653 FVG--SALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII--CGYAQNGQGNKALTAFR 707

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           + LD G   + V  + + +A      VE+
Sbjct: 708 MMLDEGISPDGVTFTGILSACSHQGLVEE 736


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 293/840 (34%), Positives = 467/840 (55%), Gaps = 56/840 (6%)

Query: 46  YSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK 105
           Y ++ +   S    T P  I  C  +  +     IH  +L  G  + + + + L++ Y  
Sbjct: 17  YIKVSLFSTSAPEIT-PPFIHKCKTISQVKL---IHQKLLSFGILTLN-LTSHLISTYIS 71

Query: 106 CYDFRKARQLFDRMGEKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFV 164
                 A  L  R    +  V  WNS+I +Y  +G   + L LF  M  +    + YTF 
Sbjct: 72  VGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFP 131

Query: 165 AALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
              +AC + S    G   HA ++ +G    V+V NAL+AMY+RC  +++A  V  ++   
Sbjct: 132 FVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW 191

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           D VSWNS++  + +      A++ F  +    G +PD +  VN +     LG    GK+L
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           H +A+    + ++ +GN L+DMYAKC  ++    VF  M+ +D +SW  ++AGY+Q    
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRF 311

Query: 344 LKALELFRTVQLEGLDADVMI-----------------------------------IGSV 368
             A+ LF  +Q E +  DV+                                    + SV
Sbjct: 312 EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS--------DLVILNAIVDVYGKCGNIDYSRNVFE 420
           L  C+ +  +   KEIH Y I+  +         + +++N ++D+Y KC  +D +R +F+
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFD 431

Query: 421 SIESK--DVVSWTSMISSYVHNGLANEALELFYLMNEANVES--DSITLVSALSAASSLS 476
           S+  K  DVV+WT MI  Y  +G AN+ALEL   M E + ++  ++ T+  AL A +SL+
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA 491

Query: 477 ILKKGKELNGFIIRKGFN-LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
            L+ GK+++ + +R   N +   V++ L+DMYA+CG++  A  VF+ +  K+ + WTS++
Sbjct: 492 ALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLM 551

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
              G+HG G+ A+ +F +M    F  D +T L +LYACSHSG+I++G ++   M+  + +
Sbjct: 552 TGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGV 611

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
            P PEHYACLVDLLGRA  L  A + +  M +EP   VW A L  CR+H   ELGE  A+
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAE 671

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           K+ EL   + G+Y L+SN++A + +WKDV ++R  MR  G+KK PG SW+E      +F 
Sbjct: 672 KITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFF 731

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
             DK+H  + EIY+ L +  +++ ++ GYV +T F LH+V++EEK  +L+ HSE+LA+AY
Sbjct: 732 VGDKTHPHAKEIYQVLLDHMQRI-KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAY 790

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G+L + +G+ IRITKNLRVC DCH+    +SR+   ++++RD++RFHHF+ G CSC  YW
Sbjct: 791 GILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 190/626 (30%), Positives = 307/626 (49%), Gaps = 59/626 (9%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
           S   V+ WN+++ +Y  NG   + L  +  M  L  + D +TFP V KAC  +  + CG 
Sbjct: 88  SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
             H L L  G+ S  F+ N+LVAMY++C     AR++FD M    DVV WNSII +Y+  
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM-SVWDVVSWNSIIESYAKL 206

Query: 139 GQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
           G+   AL +F  M    G   +  T V  L  C      +LG ++H   V S     ++V
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ---- 253
            N L+ MYA+CG M EA  V   +  KD VSWN+M+ G+ Q   +  A++ F ++Q    
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326

Query: 254 -------------------------------GAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
                                           +G KP++V  ++ +S    +G L++GKE
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386

Query: 283 LHAYAI-------KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ--DFISWTTI 333
           +H YAI       K G   +  + N L+DMYAKC  V+    +F  ++ +  D ++WT +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIR- 390
           I GY+Q+    KALEL   +  E      +   I   L+AC+ L  +   K+IH Y +R 
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506

Query: 391 -KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
            +    L + N ++D+Y KCG+I  +R VF+++ +K+ V+WTS+++ Y  +G   EAL +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYA 508
           F  M     + D +TL+  L A S   ++ +G E  N      G +      + LVD+  
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626

Query: 509 RCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH---I 564
           R G L+ A ++   +  +   ++W + ++   +H  GKV +  +   +    A +H    
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH--GKVELGEYAAEKITELASNHDGSY 684

Query: 565 TFLALLYACSHSGLINEGKKFLEIMR 590
           T L+ LYA  ++G   +  +   +MR
Sbjct: 685 TLLSNLYA--NAGRWKDVTRIRSLMR 708



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 229/491 (46%), Gaps = 62/491 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MY +C S+ DA ++FD++S   V +WN+++ +Y   G+P   LE +SRM    G   D  
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI 230

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC------------- 106
           T   V+  CA L     G ++H   +        F+ N LV MYAKC             
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290

Query: 107 --------------YD----FRKARQLFDRMGE---KEDVVLWNSIISAYSASGQCLEAL 145
                         Y     F  A +LF++M E   K DVV W++ IS Y+  G   EAL
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV-------KSGQNLQVYVA 198
           G+ R+M   G+  N  T ++ L  C        G EIH   +       K+G   +  V 
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI 410

Query: 199 NALIAMYARCGKMTEAAGVLYQLENK--DSVSWNSMLTGFVQNDLYCKAMQFFREL--QG 254
           N LI MYA+C K+  A  +   L  K  D V+W  M+ G+ Q+    KA++   E+  + 
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK-QGFVSDLQIGNTLMDMYAKCCCVN 313
              +P+      A+ A   L  L  GK++HAYA++ Q     L + N L+DMYAKC  ++
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
               VF  M A++ ++WT+++ GY  +    +AL +F  ++  G   D + +  VL ACS
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590

Query: 374 -------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE--SIES 424
                  G++  ++ K + G  +  G      L   VD+ G+ G ++ +  + E   +E 
Sbjct: 591 HSGMIDQGMEYFNRMKTVFG--VSPGPEHYACL---VDLLGRAGRLNAALRLIEEMPMEP 645

Query: 425 KDVVSWTSMIS 435
             VV W + +S
Sbjct: 646 PPVV-WVAFLS 655



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 6/173 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA  +FD +  +   TW +++  Y  +G     L  +  MR +G  +D  T
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    +D G +  + +    G          LV +  +      A +L + M
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN---AYTFVAALQA 169
             +   V+W + +S     G+    LG +   +   L +N   +YT ++ L A
Sbjct: 642 PMEPPPVVWVAFLSCCRIHGKV--ELGEYAAEKITELASNHDGSYTLLSNLYA 692


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 286/801 (35%), Positives = 455/801 (56%), Gaps = 11/801 (1%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN 97
           + ++ LE+   +R   I V+   +  +++ C   +  D G++++ LV          + N
Sbjct: 80  QAMKRLESMLELR---IEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGN 136

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
           +L++M+ +  +   A  +F +M E+ DV  WN ++  Y+ +G   EAL L+  M    + 
Sbjct: 137 ALLSMFVRFGNLLDAWYVFGKMSER-DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            N YTF + L+ C   S    G EIHA  ++ G    V V NALI MY +CG ++ A  +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++  +D +SWN+M++G+ +N    + ++ F  ++     PD +      SA   L N 
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+ +H Y +K  F  D+ + N+L+ MY+    +     VF +M ++D +SWT +IA  
Sbjct: 316 RLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASL 375

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
             +    KA+E ++ ++LEG+  D + + SVL AC+ +  +     +H   I+ GL S +
Sbjct: 376 VSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHV 435

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           ++ N+++D+Y KC  +D +  VF +I  K+VVSWTS+I     N  + EAL  F  M E+
Sbjct: 436 IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES 495

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            ++ +S+TL+S LSA + +  L +GKE++   +R G   +G + ++++DMY RCG    A
Sbjct: 496 -MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA 554

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
              FN  Q KD+  W  ++      G+ K+A++LF KM      PD ITF++LL ACS S
Sbjct: 555 LNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS 613

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           G++ EG ++  IM+  Y L P  +HYAC+VD+LGRA  L++AY F++ M I P A +W A
Sbjct: 614 GMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGA 673

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL ACR+H N ELGEI AK++ E D  + G Y+L+ N++A    W  V +VR  MR  GL
Sbjct: 674 LLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGL 733

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
              PG SW+EI  K+H+F++ D SHS+S EI   L     K++  G    ++ F   +  
Sbjct: 734 SADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFT--SEI 791

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           E  +  +  GHSER AIA+G++ +  G  I +TKNL +C  CH+  K +S +  RE+ VR
Sbjct: 792 ESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVR 851

Query: 817 DANRFHHFEAGVCSCGD--YW 835
           D   +HHF+ GVCSCGD  YW
Sbjct: 852 DVEEYHHFKDGVCSCGDEGYW 872



 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 199/579 (34%), Positives = 321/579 (55%), Gaps = 13/579 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ + G++LDA  +F K+S+R VF+WN ++G Y   G     L  Y RM    I  + +T
Sbjct: 141 MFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYT 200

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V+K CA + D+  G +IH  V++ G++S   + N+L+ MY KC D   AR LFD+M 
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKM- 259

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D + WN++IS Y  +G  LE L LF  M+ + +  +  T      ACE    E LG 
Sbjct: 260 PKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGR 319

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   VKS     + + N+LI MY+  G++ EA  V  ++E+KD VSW +M+   V + 
Sbjct: 320 GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  KA++ ++ ++  G  PD++  V+ +SA   +G+L  G  LH  AIK G VS + + N
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSN 439

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMY+KC CV+    VF  ++ ++ +SWT++I G   NN   +AL  FR ++ E +  
Sbjct: 440 SLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-ESMKP 498

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           + + + SVL AC+ +  + + KEIH + +R G+  D  + NAI+D+Y +CG    + N F
Sbjct: 499 NSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF 558

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            S + KDV +W  +++ Y   G A  A+ELF  M E  +  D IT +S L A S   ++ 
Sbjct: 559 NS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVT 617

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           +G E    I++  +NL  ++   + +VD+  R G LD A      +  + D  +W +++N
Sbjct: 618 EGLEYFN-IMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLN 676

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           A  +H     G++A    ++ + +S    +   L  LYA
Sbjct: 677 ACRIHRNVELGEIAAKRVFEKDNKSVG--YYILLCNLYA 713


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 288/859 (33%), Positives = 498/859 (57%), Gaps = 36/859 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ KCG++ +AE L D+ +  +V++  AM+ A++ +G P + +E + RM V     +   
Sbjct: 89  MHAKCGNLAEAEALADRFA--SVYSCTAMIRAWMEHGRPDKAMELFDRMEV---RPNCHA 143

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM- 119
              ++ AC+ L +L  G +IH  +    ++    + N+L++MY+KC     A+Q FDR+ 
Sbjct: 144 LIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLP 203

Query: 120 -GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFET 177
              K DVV WN++ISA+  +G   EAL LFR+M R G    N+ TFV+ L +C ++   +
Sbjct: 204 RASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLS 263

Query: 178 LG--MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS----VSWNS 231
           L     IH   V +G   + +V  AL+  Y + G + +A  V  +  +++     V+ ++
Sbjct: 264 LEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSA 323

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M++   QN    ++++ F  +   G KP  V  V+ ++A     ++L      A+ ++Q 
Sbjct: 324 MISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNAC----SMLQVGSATAFVLEQA 379

Query: 292 F-----VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
                   D  +G TL+  YA+   +      F  + + D +SW  + A Y Q++   +A
Sbjct: 380 MEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREA 439

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT---KEIHGYIIRKGLS-DLVILNAI 402
           L LF  + LEG+   V    + L AC+     + +   K I   +   GL  D  + NA 
Sbjct: 440 LVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANAT 499

Query: 403 VDVYGKCGNIDYSRNVFESIES--KDVVSWTSMISSYVHNGLANEALELFYLMN-EANVE 459
           +++Y KCG++  +R VFE I    +D ++W SM+++Y H+GL  EA ELF  M  E  V+
Sbjct: 500 LNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVK 559

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            + +T V+ L A++S + + +G+E++  ++  GF  +  + ++L++MYA+CG+LD A  +
Sbjct: 560 PNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAI 619

Query: 520 FN--CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           F+      +D+I WTS+I     +G+ + A+ LF+ M+ +   P+H+TF++ L AC+H G
Sbjct: 620 FDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGG 679

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCA 636
            + +G + L  M  D+ + P  +H++C+VDLLGR   L+EA + + R+ Q +     W A
Sbjct: 680 KLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVI--TWMA 737

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL AC+     E GE  A+++++LDP    +Y+++++++AA+ +W +   +R  M   G+
Sbjct: 738 LLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGI 797

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           +  PG S +E+  ++HSF A DKSH +S+EIY +L  +   + +  GYVA T  VLH+V 
Sbjct: 798 RADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSI-KAAGYVADTGLVLHDVS 856

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           +E K ++L  HSE+LAIA+G++ +  GS +R+ KNLRVC DCH+  KL+S++ GR++++R
Sbjct: 857 QEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMR 916

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D++R+HHF +G CSCGDYW
Sbjct: 917 DSSRYHHFTSGTCSCGDYW 935



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 154/546 (28%), Positives = 268/546 (49%), Gaps = 26/546 (4%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYD--STDFIVNSLVAMYAKCYDFRKARQLFD 117
           T+ C+++AC  L+ L  G ++H  +L    D  +  F+ + L+ M+AKC +  +A  L D
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           R      V    ++I A+   G+  +A+ LF  M+   +  N +  +A + AC       
Sbjct: 105 RFAS---VYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGNLA 158

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE---NKDSVSWNSMLT 234
            G  IH+            + NALI+MY++CG + +A     +L     +D V+WN+M++
Sbjct: 159 AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMIS 218

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS---GRLGNLLNGKELHAYAIKQG 291
            F++N    +A+Q FR++   G  P    T  +V  S     L +L + + +H   +  G
Sbjct: 219 AFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG 278

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM----TAQDFISWTTIIAGYAQNNCHLKAL 347
              +  +   L+D Y K   ++    VF +      +   ++ + +I+   QN    ++L
Sbjct: 279 IEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESL 338

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI--HGYIIRKGLSDLVILNAIVDV 405
            LF  + LEG     + + SVL ACS L+  S T  +      +     D V+   ++  
Sbjct: 339 RLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTT 398

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y +  ++  +R  F++I+S DVVSW +M ++Y+ +  + EAL LF  M    V     T 
Sbjct: 399 YARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATF 458

Query: 466 VSALSAASSLSILKK---GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
           ++AL+A ++         GK +   +   G   + +VA++ ++MYA+CG+L  A  VF  
Sbjct: 459 ITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFER 518

Query: 523 VQT--KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA-PDHITFLALLYACSHSGLI 579
           +    +D I W SM+ A G HG GK A +LF  MEAE    P+ +TF+A+L A +    I
Sbjct: 519 ISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSI 578

Query: 580 NEGKKF 585
            +G++ 
Sbjct: 579 AQGREI 584


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 278/786 (35%), Positives = 463/786 (58%), Gaps = 11/786 (1%)

Query: 54  ISVDAFTFPC--VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
           I  + +  P   +++ C+ LK+L     I  L+ K G          LV+++ +     +
Sbjct: 31  IPANVYEHPAALLLERCSSLKELR---HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDE 87

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A ++F+ + +K +V L+ +++  ++      +AL  F  M+   +    Y F   L+ C 
Sbjct: 88  AARVFEPIDKKLNV-LYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCG 146

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           D +   +G EIH   VKSG +L ++    L  MYA+C ++ EA  V  ++  +D VSWN+
Sbjct: 147 DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNT 206

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++ G+ QN +   A++    +     KP  +  V+ + A   L  +  GKE+H YA++ G
Sbjct: 207 IVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAG 266

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F S + I   L+DMYAKC  +     +F  M  ++ +SW ++I  Y QN    +A+ +F+
Sbjct: 267 FDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQ 326

Query: 352 TVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
            +  EG+   DV ++G+ L AC+ L  + + + IH   +   L  ++ ++N+++ +Y KC
Sbjct: 327 KMLDEGVKPTDVSVMGA-LHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKC 385

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
             +D + ++F  ++S+ +VSW +MI  +  NG   EAL  F  M    V+ D+ T VS +
Sbjct: 386 KEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVI 445

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           +A + LSI    K ++G ++R   +    V ++LVDMYA+CGA+ IA  +F+ +  + + 
Sbjct: 446 TAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            W +MI+  G HG GK A++LF +M+  +  P+ +TFL+++ ACSHSGL+  G K   +M
Sbjct: 506 TWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMM 565

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
           + +Y ++P  +HY  +VDLLGRA  L EA+ F+  M ++P   V+ A+LGAC++H N   
Sbjct: 566 KENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNF 625

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
            E VA++L EL+P + G +VL++N++ A+  W+ V QVR+ M   GL+KTPG S +EI N
Sbjct: 626 AEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKN 685

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           ++HSF +   +H  S +IY  L ++  ++ +E GYV  T  +L  +E++ K Q+L  HSE
Sbjct: 686 EVHSFFSGSTAHPSSKKIYAFLEKLICQI-KEAGYVPDTNLIL-GLEDDVKEQLLSSHSE 743

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           +LAI++G+L +T G+ I + KNLRVC DCH+  K +S + GRE++VRD  RFHHF+ G C
Sbjct: 744 KLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGAC 803

Query: 830 SCGDYW 835
           SCGDYW
Sbjct: 804 SCGDYW 809



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 162/546 (29%), Positives = 292/546 (53%), Gaps = 8/546 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++ + GSV +A ++F+ + ++    +  ML  +    +  + L+ + RMR   +    + 
Sbjct: 78  LFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYN 137

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++K C    +L  G +IHGL++K G+    F +  L  MYAKC    +AR++FDRM 
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMP 197

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D+V WN+I++ YS +G    AL +   M    L  +  T V+ L A        +G 
Sbjct: 198 ER-DLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGK 256

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   +++G +  V +A AL+ MYA+CG +  A  +   +  ++ VSWNSM+  +VQN+
Sbjct: 257 EIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNE 316

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +AM  F+++   G KP  V  + A+ A   LG+L  G+ +H  +++     ++ + N
Sbjct: 317 NPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVN 376

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MY KC  V+    +F ++ ++  +SW  +I G+AQN   ++AL  F  +Q   +  
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKP 436

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     SV+ A + L      K IHG ++R  L  ++ +  A+VD+Y KCG I  +R +F
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIF 496

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +  + V +W +MI  Y  +G+   ALELF  M +  +  + +T +S +SA S   +++
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVE 556

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMI 535
            G  L  F ++++ +++E S+    ++VD+  R G L+ A      +  K  + ++ +M+
Sbjct: 557 AG--LKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614

Query: 536 NANGLH 541
            A  +H
Sbjct: 615 GACQIH 620


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 278/779 (35%), Positives = 451/779 (57%), Gaps = 77/779 (9%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+  V++ CA LK    G K+H ++        + +   LV+ YA C D ++ R++FD M
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK++V LWN ++S Y+  G   E++ LF+ M   G+                       
Sbjct: 161 -EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE---------------------- 197

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY-QLENKDSVSWNSMLTGFVQ 238
                                        GK  E+A  L+ +L ++D +SWNSM++G+V 
Sbjct: 198 -----------------------------GKRPESAFELFDKLCDRDVISWNSMISGYVS 228

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N L  + +  ++++   G   D    ++ +      G L  GK +H+ AIK  F   +  
Sbjct: 229 NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF 288

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            NTL+DMY+KC  ++   RVF +M  ++ +SWT++IAGY ++     A++L + ++ EG+
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGV 348

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             DV+ I S+L AC+    +   K++H YI    + S+L + NA++D+Y KCG+++ + +
Sbjct: 349 KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANS 408

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF ++  KD++SW +MI                       ++ DS T+   L A +SLS 
Sbjct: 409 VFSTMVVKDIISWNTMI---------------------GELKPDSRTMACVLPACASLSA 447

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L++GKE++G+I+R G++ +  VA++LVD+Y +CG L +A  +F+ + +KDL+ WT MI  
Sbjct: 448 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAG 507

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G+HG G  AI  F +M      PD ++F+++LYACSHSGL+ +G +F  IM+ D+ ++P
Sbjct: 508 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEP 567

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHYAC+VDLL R  +L +AY+F+ ++ I P A +W ALL  CR + + EL E VA+++
Sbjct: 568 KLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERV 627

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA- 716
            EL+P N G YVL++N++A + KW++V+++R ++   GL+K PG SWIEI  K++ F++ 
Sbjct: 628 FELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSG 687

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            + SH  S  I   L ++  K++ EG +  +T++ L N +E +K   L GHSE+LA+A+G
Sbjct: 688 NNSSHPHSKNIESLLKKMRRKMKEEG-HFPKTKYALINADEMQKEMALCGHSEKLAMAFG 746

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +L       IR+TKNLRVC DCH   K +S+   RE+V+RD NRFHHF+ G CSC  +W
Sbjct: 747 LLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 211/428 (49%), Gaps = 27/428 (6%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A +LFDK+  R V +WN+M+  YVSNG   R L  Y +M  LGI VD  T   V+  CA 
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
              L  G  +H L +K  ++      N+L+ MY+KC D   A ++F++MGE+ +VV W S
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER-NVVSWTS 322

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I+ Y+  G+   A+ L ++M++ G+  +     + L AC  S     G ++H     + 
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               ++V NAL+ MYA+CG M  A  V   +  KD +SWN+M+                 
Sbjct: 383 MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL-------------- 428

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
                  KPD       + A   L  L  GKE+H Y ++ G+ SD  + N L+D+Y KC 
Sbjct: 429 -------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            +     +F  + ++D +SWT +IAGY  +    +A+  F  ++  G++ D +   S+L 
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS---DLVILNAIVDVYGKCGNIDYSRNVFESIE-SKD 426
           ACS    + Q      YI++   +    L     +VD+  + GN+  +    E++  + D
Sbjct: 542 ACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPD 600

Query: 427 VVSWTSMI 434
              W +++
Sbjct: 601 ATIWGALL 608



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 154/333 (46%), Gaps = 30/333 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F+K+ +R V +W +M+  Y  +G     ++   +M   G+ +D   
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA    LD G  +H  +     +S  F+ N+L+ MYAKC     A  +F  M 
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D++ WN++I                       L  ++ T    L AC   S    G 
Sbjct: 415 VK-DIISWNTMIGE---------------------LKPDSRTMACVLPACASLSALERGK 452

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   +++G +   +VANAL+ +Y +CG +  A  +   + +KD VSW  M+ G+  + 
Sbjct: 453 EIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHG 512

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E++ AG +PD+V  ++ + A    G L  G     Y +K  F  + +   
Sbjct: 513 YGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPK--- 568

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
             ++ YA  C V+ + R      A +FI    I
Sbjct: 569 --LEHYA--CMVDLLSRTGNLSKAYEFIETLPI 597



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 3/150 (2%)

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
           ++  C  I  S     +I+ + V  + + I  +   G    A+EL  +  ++ +E+   T
Sbjct: 45  IFSSCIPIRISATPTRTIDHQ-VTDYNAKILHFCQLGDLENAMELICMCKKSELETK--T 101

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
             S L   + L     GK+++  I      ++ ++   LV  YA CG L    +VF+ ++
Sbjct: 102 YSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTME 161

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            K++ LW  M++     G  K +I LF  M
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIM 191


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/690 (38%), Positives = 412/690 (59%), Gaps = 3/690 (0%)

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           L   +QR GL+T+++ +V  L+ C          ++H   +KS      +V N L+ +Y 
Sbjct: 16  LMNRLQR-GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYI 74

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
            CG++ EA  V   L  K   SWN+M+ G+V++     AM+ FRE+   G +P+    + 
Sbjct: 75  ECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMI 134

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            + A   L  L  GKE+HA     G  SD+++G  L+ MY KC  +N   R+F  +   D
Sbjct: 135 ILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHD 194

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            ISWT +I  YAQ+    +A  L   ++ EG   + +   S+L AC+    +   K +H 
Sbjct: 195 IISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHR 254

Query: 387 YIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           + +  GL  D+ +  A+V +Y K G+ID +R VF+ ++ +DVVSW  MI ++  +G  +E
Sbjct: 255 HALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHE 314

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A +LF  M     + D+I  +S L+A +S   L+  K+++   +  G  ++  V ++LV 
Sbjct: 315 AYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVH 374

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY++ G++D A  VF+ ++ ++++ W +MI+    HG G+ A+++F +M A    PD +T
Sbjct: 375 MYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVT 434

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F+A+L ACSH+GL++EG+     M   Y ++P   H  C+VDLLGRA  L EA  F+ +M
Sbjct: 435 FVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNM 494

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
            ++P    W ALLG+CR + N ELGE+VAK+ L+LDP N   YVL+SN++A + KW  V 
Sbjct: 495 AVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVS 554

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
            VR  MR  G++K PG SWIE+ NKIH F+  D SH E  EI +   ++ EK++ E GY+
Sbjct: 555 WVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAE-GYI 613

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
             T+ VL N   ++K   +  HSE+LAI YG++ +  G+ IR+ KNLRVC DCH   KL+
Sbjct: 614 PDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLI 673

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S++ GRE++VRDANRFHHF+ GVCSCGDYW
Sbjct: 674 SKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 150/495 (30%), Positives = 262/495 (52%), Gaps = 8/495 (1%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G+  D+F +  V+K C   KDL    ++H  ++K   +    ++N+L+ +Y +C   ++A
Sbjct: 23  GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEA 82

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           R +FD + +K     WN++I+ Y       +A+ LFREM   G+  NA T++  L+AC  
Sbjct: 83  RCVFDALVKKSGAS-WNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACAS 141

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
            S    G E+HA     G    V V  AL+ MY +CG + EA  +   L N D +SW  M
Sbjct: 142 LSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVM 201

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           +  + Q+    +A +   +++  G KP+ +  V+ ++A    G L   K +H +A+  G 
Sbjct: 202 IGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGL 261

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
             D+++G  L+ MYAK   ++    VF +M  +D +SW  +I  +A++    +A +LF  
Sbjct: 262 ELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQ 321

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGN 411
           +Q EG   D ++  S+L AC+    +   K+IH + +  GL  D+ +  A+V +Y K G+
Sbjct: 322 MQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGS 381

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           ID +R VF+ ++ ++VVSW +MIS    +GL  +ALE+F  M    V+ D +T V+ LSA
Sbjct: 382 IDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSA 441

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVF--NCVQTKD 527
            S   ++ +G+      + + + +E  V+  + +VD+  R G L +  K+F  N     D
Sbjct: 442 CSHAGLVDEGRS-QYLAMTQVYGIEPDVSHCNCMVDLLGRAGRL-MEAKLFIDNMAVDPD 499

Query: 528 LILWTSMINANGLHG 542
              W +++ +   +G
Sbjct: 500 EATWGALLGSCRTYG 514



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 229/439 (52%), Gaps = 4/439 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y +CG + +A  +FD + +++  +WNAM+  YV +      +  +  M   G+  +A T
Sbjct: 72  VYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGT 131

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++KACA L  L  G ++H  +   G +S   +  +L+ MY KC    +AR++FD + 
Sbjct: 132 YMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL- 190

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D++ W  +I AY+ SG   EA  L  +M++ G   NA T+V+ L AC          
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   + +G  L V V  AL+ MYA+ G + +A  V  +++ +D VSWN M+  F ++ 
Sbjct: 251 RVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHG 310

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F ++Q  G KPD +  ++ ++A    G L   K++H +A+  G   D+++G 
Sbjct: 311 RGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGT 370

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MY+K   ++    VF +M  ++ +SW  +I+G AQ+     ALE+FR +   G+  
Sbjct: 371 ALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKP 430

Query: 361 DVMIIGSVLMACS--GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNV 418
           D +   +VL ACS  GL    +++ +    +     D+   N +VD+ G+ G +  ++  
Sbjct: 431 DRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLF 490

Query: 419 FESIE-SKDVVSWTSMISS 436
            +++    D  +W +++ S
Sbjct: 491 IDNMAVDPDEATWGALLGS 509



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 6/264 (2%)

Query: 438 VHNGLANEALE-LFYLMN--EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           +H   AN   E +  LMN  +  + +DS   V  L        L   K+++  II+    
Sbjct: 1   MHVQTANTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRME 60

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
               V ++L+ +Y  CG L  A  VF+ +  K    W +MI     H   + A+ LF +M
Sbjct: 61  QNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREM 120

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
             E   P+  T++ +L AC+    +  GK+    +R    L+        L+ + G+   
Sbjct: 121 CHEGVQPNAGTYMIILKACASLSALKWGKEVHACIR-HGGLESDVRVGTALLRMYGKCGS 179

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVHSN-KELGEIVAKKLLELDPGNPGNYVLISN 673
           + EA +   ++        W  ++GA     N KE   ++ +   E    N   YV I N
Sbjct: 180 INEARRIFDNLMNHDIIS-WTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILN 238

Query: 674 VFAASRKWKDVEQVRMRMRGSGLK 697
             A+    K V++V      +GL+
Sbjct: 239 ACASEGALKWVKRVHRHALDAGLE 262


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 282/830 (33%), Positives = 478/830 (57%), Gaps = 10/830 (1%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           +A  LFDK   R   ++ ++L  +  +G        +  +  LG+ +D   F  V+K  A
Sbjct: 45  NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
            L D   G ++H   +K G+     +  SLV  Y K  +F+  R++FD M E+ +VV W 
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER-NVVTWT 163

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           ++IS Y+ +    E L LF  MQ  G   N++TF AAL    +      G+++H   VK+
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G +  + V+N+LI +Y +CG + +A  +  + E K  V+WNSM++G+  N L  +A+  F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
             ++    +  +    + +     L  L   ++LH   +K GF+ D  I   LM  Y+KC
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343

Query: 310 CCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
             +    R+F ++    + +SWT +I+G+ QN+   +A++LF  ++ +G+  +      +
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           L A   L  +S + E+H  +++        +  A++D Y K G ++ +  VF  I+ KD+
Sbjct: 404 LTA---LPVISPS-EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILKKGKELNG 486
           V+W++M++ Y   G    A+++F  + +  ++ +  T  S L+  A++ + + +GK+ +G
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519

Query: 487 FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
           F I+   +    V+S+L+ MYA+ G ++ A +VF   + KDL+ W SMI+    HG+   
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           A+D+F +M+      D +TF+ +  AC+H+GL+ EG+K+ +IM  D ++ P  EH +C+V
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           DL  RA  LE+A + + +M     + +W  +L ACRVH   ELG + A+K++ + P +  
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSA 699

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
            YVL+SN++A S  W++  +VR  M    +KK PG SWIE+ NK +SF+A D+SH   D+
Sbjct: 700 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQ 759

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
           IY KL +++ +L ++ GY   T +VL ++++E K  +L  HSERLAIA+G++ + +GS +
Sbjct: 760 IYMKLEDLSTRL-KDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPL 818

Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA-GVCSCGDYW 835
            I KNLRVC DCH   KL++++  RE+VVRD+NRFHHF + GVCSCGD+W
Sbjct: 819 LIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 176/596 (29%), Positives = 308/596 (51%), Gaps = 17/596 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K  +  D  ++FD++ +R V TW  ++  Y  N     VL  + RM+  G   ++FTF
Sbjct: 138 YMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTF 197

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              +   A       G ++H +V+K G D T  + NSL+ +Y KC + RKAR LFD+  E
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKT-E 256

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            + VV WNS+IS Y+A+G  LEALG+F  M+   +  +  +F + ++ C +        +
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQ 316

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQND 240
           +H + VK G      +  AL+  Y++C  M +A  +  ++    + VSW +M++GF+QND
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E++  G +P++      ++A      +++  E+HA  +K  +     +G 
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGT 432

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D Y K   V    +VF  +  +D ++W+ ++AGYAQ      A+++F  +   G+  
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492

Query: 361 DVMIIGSVLMACSGLKC-MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
           +     S+L  C+     M Q K+ HG+ I+  L S L + +A++ +Y K GNI+ +  V
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+    KD+VSW SMIS Y  +G A +AL++F  M +  V+ D +T +   +A +   ++
Sbjct: 553 FKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLV 612

Query: 479 KKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMIN 536
           ++G++    ++R           S +VD+Y+R G L+ A KV  N        +W +++ 
Sbjct: 613 EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILA 672

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           A  +H +   G++A +    M+ E  A      L+ +YA   SG   E  K  ++M
Sbjct: 673 ACRVHKKTELGRLAAEKIIAMKPEDSAA--YVLLSNMYA--ESGDWQERAKVRKLM 724



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 226/429 (52%), Gaps = 11/429 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG+V  A  LFDK   ++V TWN+M+  Y +NG  L  L  +  MR+  + +   +
Sbjct: 238 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS 297

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VIK CA LK+L    ++H  V+K G+     I  +L+  Y+KC     A +LF  +G
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              +VV W ++IS +  +    EA+ LF EM+R G+  N +T+   L A    S      
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PS 413

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+HA  VK+       V  AL+  Y + GK+ EAA V   +++KD V+W++ML G+ Q  
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473

Query: 241 LYCKAMQFFRELQGAGQKPDQVC---TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
               A++ F EL   G KP++      +N  +A+    ++  GK+ H +AIK    S L 
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN--ASMGQGKQFHGFAIKSRLDSSLC 531

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + + L+ MYAK   +     VF +   +D +SW ++I+GYAQ+   +KAL++F+ ++   
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILNA-IVDVYGKCGNIDYS 415
           +  D +    V  AC+    + + ++    ++R   ++     N+ +VD+Y + G ++ +
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651

Query: 416 RNVFESIES 424
             V E++ +
Sbjct: 652 MKVIENMPN 660


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/706 (37%), Positives = 428/706 (60%), Gaps = 4/706 (0%)

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           + A +A      AL  F  M   G      TF + L+ C        G  +HA     G 
Sbjct: 31  LRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI 90

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
           + +   A AL  MYA+C +  +A  V  ++  +D V+WN+++ G+ +N L   AM+    
Sbjct: 91  DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150

Query: 252 LQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           +Q   G++PD +  V+ + A      L   +E HA+AI+ G    + +   ++D Y KC 
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            +     VF  M  ++ +SW  +I GYAQN    +AL LF  +  EG+D   + + + L 
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQ 270

Query: 371 ACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC  L C+ +   +H  ++R GL S++ ++NA++ +Y KC  +D + +VF+ ++ +  VS
Sbjct: 271 ACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           W +MI     NG + +A+ LF  M   NV+ DS TLVS + A + +S   + + ++G+ I
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSI 390

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           R   + +  V ++L+DMYA+CG ++IA  +FN  + + +I W +MI+  G HG GK A++
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLL 609
           LF +M++    P+  TFL++L ACSH+GL++EG+++   M+ DY L+P  EHY  +VDLL
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLL 510

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV 669
           GRA  L+EA+ F++ M ++P   V+ A+LGAC++H N EL E  A+K+ EL P     +V
Sbjct: 511 GRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHV 570

Query: 670 LISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYK 729
           L++N++A +  WKDV +VR  M  +GL+KTPG S I++ N+IH+F +   +H ++ EIY 
Sbjct: 571 LLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYS 630

Query: 730 KLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRIT 789
           +LA++ E++ +  GYV  T  + H+VE++ K Q+L  HSE+LAIA+G++++  G+ I+I 
Sbjct: 631 RLAKLIEEI-KAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIK 688

Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           KNLRVC DCH+  KL+S + GRE+++RD  RFHHF+ G CSCGDYW
Sbjct: 689 KNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 163/521 (31%), Positives = 261/521 (50%), Gaps = 9/521 (1%)

Query: 27  NAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLK 86
           +A L A  +  +    L  +  M   G      TF  ++K CA   DL  G  +H  +  
Sbjct: 28  HARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAA 87

Query: 87  CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALG 146
            G DS      +L  MYAKC     AR++FDRM  + D V WN++++ Y+ +G    A+ 
Sbjct: 88  RGIDSEALAATALANMYAKCRRPADARRVFDRMPVR-DRVAWNALVAGYARNGLARMAME 146

Query: 147 LFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
           +   MQ   G   ++ T V+ L AC ++       E HA  ++SG    V VA A++  Y
Sbjct: 147 MVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAY 206

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
            +CG +  A  V   +  K+SVSWN+M+ G+ QN    +A+  F  +   G     V  +
Sbjct: 207 CKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVL 266

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
            A+ A G LG L  G  +H   ++ G  S++ + N L+ MY+KC  V+    VF ++  +
Sbjct: 267 AALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRR 326

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
             +SW  +I G AQN C   A+ LF  +QLE +  D   + SV+ A + +    Q + IH
Sbjct: 327 TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIH 386

Query: 386 GYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           GY IR  L  D+ +L A++D+Y KCG ++ +R +F S   + V++W +MI  Y  +G   
Sbjct: 387 GYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGK 446

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI-IRKGFNLEGSVA--S 501
            A+ELF  M    +  +  T +S LSA S   ++ +G+E   F  +++ + LE  +    
Sbjct: 447 AAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREY--FTSMKEDYGLEPGMEHYG 504

Query: 502 SLVDMYARCGALDIANKVFNCVQTKD-LILWTSMINANGLH 541
           ++VD+  R G LD A      +     L ++ +M+ A  LH
Sbjct: 505 TMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLH 545



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 204/419 (48%), Gaps = 10/419 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           MY KC    DA ++FD++  R    WNA++  Y  NG     +E   RM+   G   D+ 
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V+ ACA  + L    + H   ++ G +    +  +++  Y KC D R AR +FD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K  V  WN++I  Y+ +G   EAL LF  M   G+     + +AALQAC +      G
Sbjct: 223 PTKNSVS-WNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           M +H   V+ G +  V V NALI MY++C ++  A+ V  +L+ +  VSWN+M+ G  QN
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A++ F  +Q    KPD    V+ + A   + + L  + +H Y+I+     D+ + 
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+DMYAKC  VN    +F     +  I+W  +I GY  +     A+ELF  ++  G+ 
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAIVDVYGKCGNID 413
            +     SVL ACS    + + +E        Y +  G+        +VD+ G+ G +D
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEH---YGTMVDLLGRAGKLD 517


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 293/841 (34%), Positives = 460/841 (54%), Gaps = 11/841 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            Y   G V +A+++F+++  R V +W +++ +Y  NG    V+ TY RMR  GI  +   
Sbjct: 103 FYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENN 162

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +C  L D+  G ++ G  LK G ++     NSL+ M+  C D  +A  +F+ M 
Sbjct: 163 IALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMN 222

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D + WNSIISA + +    E+   F  M+ V    N  T    L  C    +   G 
Sbjct: 223 ER-DTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGK 281

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   VK G    + + N L+++Y+  G+  +A  +  ++  +D +SWNSML  +VQ+ 
Sbjct: 282 GVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDG 341

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++ F E+    ++ + V   +A++A        NGK LH + +  G   +L IGN
Sbjct: 342 RCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGN 401

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN---NCHLKALELFRTVQLEG 357
           TL+  Y KC  +    +VF +M   D ++W  +I G+A N   N  + A +L R     G
Sbjct: 402 TLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSG 461

Query: 358 LD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
           +D    V I+GS L     +K       IH + +  G   D  + ++++ +Y KCG++  
Sbjct: 462 VDYITIVNILGSCLTHEDLIK---YGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHS 518

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           S  +F+ +  K    W ++I++    G   EAL+L   M  A +E D     +ALS A+ 
Sbjct: 519 SSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAAD 578

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L++L++G++L+G  I+ GF L+  + ++ +DMY +CG LD A ++      +  + W ++
Sbjct: 579 LAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTL 638

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I+ +  HG+   A + F+ M      P+H++F+ LL ACSH GL++EG  +   M   Y 
Sbjct: 639 ISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYG 698

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  EH  C++DLLGR+  L EA  F+  M I P   VW +LL +CR++ N +LG   A
Sbjct: 699 IQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAA 758

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           K LLELDP +   YVL SNVFA   +W+DVE VR +M    ++K P  SW++    I  F
Sbjct: 759 KHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIF 818

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
              D++H + ++I  KL  +  K+  E GYV  T + L + +EE+K   ++ HSER+A+A
Sbjct: 819 GMGDQTHPQMEQINGKLLGLM-KIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALA 877

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G++   EGS +RI KNLRVC DCHSF K VS + GR++V+RD  RFHHF  G CSC DY
Sbjct: 878 FGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDY 937

Query: 835 W 835
           W
Sbjct: 938 W 938



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 175/638 (27%), Positives = 326/638 (51%), Gaps = 18/638 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  A+ +FD++S+R   +WN M+  YV  G  +  +  +  +  +GI    F 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 61  FPCVIKAC----AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
              ++ AC     M K+   G + HG  +KCG     F+  S V  YA       A+++F
Sbjct: 61  IASLVTACNKSSIMAKE---GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMF 117

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           + M ++ +VV W S++ +YS +G   E +  ++ M+  G+  N       + +C      
Sbjct: 118 NEMPDR-NVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDI 176

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            LG ++    +K G   +V  AN+LI M+  CG + EA  +  ++  +D++SWNS+++  
Sbjct: 177 ILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISAN 236

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            QN L+ ++ ++F  ++   ++ +       +S  G +  L  GK +H  A+K G  S++
Sbjct: 237 AQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNI 296

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + NTL+ +Y+          +F +M  +D ISW +++A Y Q+   L AL++F  +   
Sbjct: 297 CLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWM 356

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYS 415
             + + +   S L AC   +  +  K +HG+++  GL D L+I N ++  YGKC  +  +
Sbjct: 357 KKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEA 416

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES-DSITLVSAL-SAAS 473
           + VF+ +   D V+W ++I  + +N   NEA+  F LM E +    D IT+V+ L S  +
Sbjct: 417 KKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLT 476

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
              ++K G  ++   +  GF+L+  V SSL+ MYA+CG L  ++ +F+ +  K   +W +
Sbjct: 477 HEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNA 536

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCD 592
           +I AN  +G G+ A+ L  +M +     D   F   L   +   ++ EG++     ++  
Sbjct: 537 IIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLG 596

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
           ++LD +  + A  +D+ G+   L++A + +     +PT
Sbjct: 597 FELDHFIINAA--MDMYGKCGELDDALRILP----QPT 628



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 241/487 (49%), Gaps = 13/487 (2%)

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           MY++ G++  A  V  ++  ++  SWN M++G+V+   Y +A+ FFR++ G G KP    
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 264 TVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
             + V+A  +   +   G + H +AIK G + D+ +G + +  YA    V+   ++F +M
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
             ++ +SWT+++  Y+ N    + +  ++ ++ EG+  +   I  V+ +C  L  +    
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 383 EIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
           ++ G+ ++ GL   V   N+++ ++G CG+I+ + ++F  +  +D +SW S+IS+   N 
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
           L  E+   F+ M   + E +  TL   LS   S+  LK GK ++G  ++ G      + +
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCN 300

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           +L+ +Y+  G    A  +F  +  +DLI W SM+      GR   A+ +F +M       
Sbjct: 301 TLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEI 360

Query: 562 DHITFLALLYACSHSGLINEGK---KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
           +++TF + L AC        GK    F+ ++    +L         L+   G+ + + EA
Sbjct: 361 NYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIG----NTLITFYGKCHKMAEA 416

Query: 619 YQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK-KLLELDPGNPGNYVLISNVFAA 677
            +  + M  +     W AL+G     +N EL E VA  KL+     +  +Y+ I N+  +
Sbjct: 417 KKVFQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVNILGS 473

Query: 678 SRKWKDV 684
               +D+
Sbjct: 474 CLTHEDL 480


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 292/837 (34%), Positives = 468/837 (55%), Gaps = 37/837 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G V + + LF+++  R V  WN ML AY+  G     ++  S     G++ +  T
Sbjct: 189 IYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +             A+I G       D +D      V  +A   D            
Sbjct: 249 LRLL-------------ARISG-------DDSD---AGQVKSFANGNDASSV-------- 277

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              +++  N  +S Y  SGQ    L  F +M    +  +  TF+  L          LG 
Sbjct: 278 --SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +K G +L + V+N+LI MY +  K   A  V   +  +D +SWNS++ G  QN 
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIG 299
           L  +A+  F +L   G KPDQ    + + A+  L   L+  K++H +AIK   VSD  + 
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 455

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+D Y++  C+     + ++    D ++W  ++AGY Q++   K L+LF  +  +G  
Sbjct: 456 TALIDAYSRNRCMKE-AEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
           +D   + +V   C  L  ++Q K++H Y I+ G   DL + + I+D+Y KCG++  ++  
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+SI   D V+WT+MIS  + NG    A  +F  M    V  D  T+ +   A+S L+ L
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           ++G++++   ++     +  V +SLVDMYA+CG++D A  +F  ++  ++  W +M+   
Sbjct: 635 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             HG GK  + LF +M++    PD +TF+ +L ACSHSGL++E  K +  M  DY + P 
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY+CL D LGRA  +++A   + SM +E +A ++  LL ACRV  + E G+ VA KLL
Sbjct: 755 IEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL 814

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           EL+P +   YVL+SN++AA+ KW +++  R  M+G  +KK PG SWIE+ NKIH F+  D
Sbjct: 815 ELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDD 874

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           +S+ +++ IY+K+ ++   +++E GYV +T F L +VEEEEK + LY HSE+LA+A+G+L
Sbjct: 875 RSNRQTELIYRKVKDMIRDIKQE-GYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLL 933

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +   + IR+ KNLRVC DCH+  K +++++ RE+V+RDANRFH F+ G+CSCGDYW
Sbjct: 934 STPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 169/646 (26%), Positives = 311/646 (48%), Gaps = 45/646 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPL--RVLETYSRMRVLGISV-- 56
           MY KCGS+  A ++FDK+  R + +WN++L AY  + E +   + + +   R+L   V  
Sbjct: 83  MYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVY 142

Query: 57  -DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
               T   ++K C     +      HG   K G D  +F+  +LV +Y K    ++ + L
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           F+ M  + DVVLWN ++ AY   G   EA+ L       GL  N  T     +   D S 
Sbjct: 203 FEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDS- 260

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                   A  VKS               +A     +  + ++++         N  L+ 
Sbjct: 261 -------DAGQVKS---------------FANGNDASSVSEIIFR---------NKGLSE 289

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           ++ +  Y   ++ F ++  +  + DQV  +  ++ + ++ +L  G+++H  A+K G    
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           L + N+L++MY K     +   VF  M+ +D ISW ++IAG AQN   ++A+ LF  +  
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409

Query: 356 EGLDADVMIIGSVLMACSGL-KCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNID 413
            GL  D   + SVL A S L + +S +K++H + I+   +SD  +  A++D Y +   + 
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  +FE   + D+V+W +M++ Y  +   ++ L+LF LM++    SD  TL +      
Sbjct: 470 EAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            L  + +GK+++ + I+ G++L+  V+S ++DMY +CG +  A   F+ +   D + WT+
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCD 592
           MI+    +G  + A  +F +M      PD  T   L  A S    + +G++     ++ +
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
              DP+      LVD+  +   +++AY   + +++      W A+L
Sbjct: 649 CTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAML 691



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 137/577 (23%), Positives = 257/577 (44%), Gaps = 45/577 (7%)

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           DL  G   H  +L    +   F++N+L++MY+KC     AR++FD+M ++ D+V WNSI+
Sbjct: 54  DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR-DLVSWNSIL 112

Query: 133 SAYSASGQCL-----EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           +AY+ S +C+     +A  LFR +++  + T+  T    L+ C  S +       H    
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
           K G +   +VA AL+ +Y + GK+ E   +  ++  +D V WN ML  +++     +A+ 
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232

Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
                  +G  P+++          RL   ++G +  A     G V     GN       
Sbjct: 233 LSSAFHSSGLNPNEITL--------RLLARISGDDSDA-----GQVKSFANGND------ 273

Query: 308 KCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
                          +  + I     ++ Y  +  +   L+ F  +    ++ D +    
Sbjct: 274 -------------ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFIL 320

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L     +  ++  +++H   ++ GL   L + N+++++Y K     ++R VF+++  +D
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERD 380

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI-LKKGKELN 485
           ++SW S+I+    NGL  EA+ LF  +    ++ D  T+ S L AASSL   L   K+++
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVH 440

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
              I+     +  V+++L+D Y+R   +  A  +F      DL+ W +M+        G 
Sbjct: 441 VHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGH 499

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYAC 604
             + LF  M  +    D  T   +   C     IN+GK+     ++  Y LD W    + 
Sbjct: 500 KTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SG 557

Query: 605 LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           ++D+  +   +  A QF       P    W  ++  C
Sbjct: 558 ILDMYVKCGDMSAA-QFAFDSIPVPDDVAWTTMISGC 593



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 188/440 (42%), Gaps = 36/440 (8%)

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
           QCL  L            +++  +   L+    SS   LG   HA  +   +N + ++ N
Sbjct: 19  QCLRPLRFTSAASPSSSSSSSSQWFGFLRNAITSSDLMLGKCTHARILTFEENPERFLIN 78

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN-----DLYCKAMQFFRELQG 254
            LI+MY++CG +T A  V  ++ ++D VSWNS+L  + Q+     +   +A   FR L+ 
Sbjct: 79  NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQ 138

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
                 ++     +      G +   +  H YA K G   D  +   L+++Y K   V  
Sbjct: 139 DVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE 198

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
              +F +M  +D + W  ++  Y +     +A++L       GL+ + +           
Sbjct: 199 GKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT---------- 248

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
                                L +L  I       G +    N  ++    +++     +
Sbjct: 249 ---------------------LRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGL 287

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           S Y+H+G  +  L+ F  M E++VE D +T +  L+ A  +  L  G++++   ++ G +
Sbjct: 288 SEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLD 347

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
           L  +V++SL++MY +      A  VF+ +  +DLI W S+I     +G    A+ LF ++
Sbjct: 348 LMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL 407

Query: 555 EAESFAPDHITFLALLYACS 574
                 PD  T  ++L A S
Sbjct: 408 LRCGLKPDQYTMTSVLKAAS 427


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/668 (39%), Positives = 404/668 (60%), Gaps = 32/668 (4%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDS-VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
           + ++++Y+    + ++  +   L +  + ++W S++  +  + L+  ++ FF ++  +G+
Sbjct: 43  STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGK 102

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN---- 313
            PD     + + +   + +L  G+ +H   I+ G   DL   N LM+MY+K   +     
Sbjct: 103 YPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNT 162

Query: 314 ----------------------YMG---RVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
                                 Y+G   +VF  M  +D +SW T+I+G AQN  H  AL 
Sbjct: 163 YKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALM 222

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYG 407
           + R +    L  D   + SVL   +    + + KEIHGY IR G  +D+ I ++++D+Y 
Sbjct: 223 MVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYA 282

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KC  +D S  VF  +   D +SW S+I+  V NG+ +E L+ F  M  A ++ + ++  S
Sbjct: 283 KCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSS 342

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            + A + L+ L  GK+L+G+IIR  F+    +AS+LVDMYA+CG +  A  +F+ ++  D
Sbjct: 343 IMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYD 402

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           ++ WT+MI    LHG    AI LF +ME E   P+++ F+A+L ACSH+GL++E  K+  
Sbjct: 403 MVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFN 462

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
            M  DY++ P  EHYA + DLLGR   LEEAY+F+  M IEPT  VW  LL ACRVH N 
Sbjct: 463 SMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNI 522

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           EL E V+KKL  +DP N G YVL+SN+++A+ +WKD  ++R+ MR  G+KK P  SWIEI
Sbjct: 523 ELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEI 582

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGH 767
            NK+H+F+A DKSH   D I + L  + E++ERE GYV  T  VLH+VEEE+K  +L  H
Sbjct: 583 KNKVHAFVAGDKSHPYYDRINEALKVLLEQMERE-GYVLDTTEVLHDVEEEQKRYLLCSH 641

Query: 768 SERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
           SERLAI +G++ +  G+ IR+TKNLRVCVDCH+  K +S++ GRE+VVRD +RFHHF+ G
Sbjct: 642 SERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDG 701

Query: 828 VCSCGDYW 835
            CSCGD+W
Sbjct: 702 KCSCGDFW 709



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 255/520 (49%), Gaps = 45/520 (8%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H  +L+    S   ++++++++Y+       +  +F+ +      + W SII  Y++ 
Sbjct: 26  QLHAQILRTSLPSPS-LLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G  L +L  F +M   G   +   F + L++C        G  +H   ++ G    +Y  
Sbjct: 85  GLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTC 144

Query: 199 NALIAMYARCGKMTEA-----------------------------AGVLYQLENKDSVSW 229
           NAL+ MY++   + E                                V   +  +D VSW
Sbjct: 145 NALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSW 204

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
           N++++G  QN ++  A+   RE+  A  +PD     + +       NLL GKE+H YAI+
Sbjct: 205 NTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIR 264

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
            G+ +D+ IG++L+DMYAKC  V+   RVFY +   D ISW +IIAG  QN    + L+ 
Sbjct: 265 NGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKF 324

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGK 408
           F+ + +  +  + +   S++ AC+ L  +   K++HGYIIR     ++ I +A+VD+Y K
Sbjct: 325 FQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAK 384

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           CGNI  +R +F+ +E  D+VSWT+MI  Y  +G A +A+ LF  M    V+ + +  ++ 
Sbjct: 385 CGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAV 444

Query: 469 LSAASSLSILKKG-KELNG----FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           L+A S   ++ +  K  N     + I  G     +VA    D+  R G L+ A +  + +
Sbjct: 445 LTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA----DLLGRVGRLEEAYEFISDM 500

Query: 524 QTKDL-ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
             +    +W++++ A  +H      I+L  K+  + F  D
Sbjct: 501 HIEPTGSVWSTLLAACRVHKN----IELAEKVSKKLFTVD 536



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 245/496 (49%), Gaps = 41/496 (8%)

Query: 1   MYGKCGSVLDAEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           +Y     + D+  +F+ + S  T   W +++  Y S+G  L  L  + +M   G   D  
Sbjct: 48  IYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHN 107

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA---RQLF 116
            FP V+K+C ++KDL  G  +HG +++ G     +  N+L+ MY+K +   +    +++F
Sbjct: 108 VFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVF 167

Query: 117 DR-------------------------MGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
           D                          M  K D+V WN++IS  + +G   +AL + REM
Sbjct: 168 DEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREM 227

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
               L  +++T  + L    +      G EIH   +++G +  V++ ++LI MYA+C ++
Sbjct: 228 GNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRV 287

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
            ++  V Y L   D +SWNS++ G VQN ++ + ++FF+++  A  KP+ V   + + A 
Sbjct: 288 DDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPAC 347

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             L  L  GK+LH Y I+  F  ++ I + L+DMYAKC  +     +F +M   D +SWT
Sbjct: 348 AHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWT 407

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE-----IHG 386
            +I GYA +     A+ LF+ +++EG+  + +   +VL ACS    + +  +        
Sbjct: 408 AMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQD 467

Query: 387 YIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS-YVHNG--L 442
           Y I  GL       A+ D+ G+ G ++ +      +  +   S W++++++  VH    L
Sbjct: 468 YRIIPGLEHYA---AVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIEL 524

Query: 443 ANEALELFYLMNEANV 458
           A +  +  + ++  N+
Sbjct: 525 AEKVSKKLFTVDPQNI 540



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 30/234 (12%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           ++L   S +K  SQ K++H  I+R  L    +L+ I+ +Y     +  S  +F S+ S  
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPP 69

Query: 427 -VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
             ++W S+I  Y  +GL   +L  F  M  +    D     S L + + +  L+ G+ ++
Sbjct: 70  TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIAN---------------------------- 517
           G IIR G   +    ++L++MY++  +L+  N                            
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189

Query: 518 -KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
            KVF  +  +D++ W ++I+ N  +G  + A+ +  +M      PD  T  ++L
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 243


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 285/801 (35%), Positives = 454/801 (56%), Gaps = 11/801 (1%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN 97
           + ++ LE+   +R   I V+   +  +++ C   +  D G++++ LV          + N
Sbjct: 80  QAMKRLESMLELR---IEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGN 136

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
           +L++M+ +  +   A  +F +M E+ DV  WN ++  Y+ +G   EAL L+  M    + 
Sbjct: 137 ALLSMFVRFGNLLDAWYVFGKMSER-DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            N YTF + L+ C   S    G EIHA  ++ G    V V NALI MY +CG ++ A  +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++  +D +SWN+M++G+ +N    + ++ F  ++     PD +      SA   L N 
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+ +H Y +K  F  D+ + N+L+ MY+    +     VF +M ++D +SWT +IA  
Sbjct: 316 RLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASL 375

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
             +    KA+E ++ ++LEG+  D + + SVL AC+ +  +     +H   I+ GL S +
Sbjct: 376 VSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHV 435

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           ++ N+++D+Y KC  +D +  VF +I  K+VVSWTS+I     N  + EAL  F  M E+
Sbjct: 436 IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES 495

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            ++ +S+TL+S LSA + +  L +GKE++   +R G   +G + ++++DMY RCG    A
Sbjct: 496 -MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA 554

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
              FN  Q KD+  W  ++      G+ K+A++LF KM      PD ITF++LL ACS S
Sbjct: 555 LNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS 613

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           G++ EG ++  IM+  Y L P  +HYAC+VD+LGRA  L++AY F++ M I P A +W A
Sbjct: 614 GMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGA 673

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL ACR+H N ELGEI AK++ E D  + G Y+L+ N++A    W  V +VR  MR  GL
Sbjct: 674 LLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGL 733

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
              PG SW+EI  K+H+F++ D SHS+S EI   L     K++  G    ++ F   +  
Sbjct: 734 SADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFT--SEI 791

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           E  +  +  GHSER AIA+G++ +  G  I + KNL +C  CH+  K +S +  RE+ VR
Sbjct: 792 ESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVR 851

Query: 817 DANRFHHFEAGVCSCGD--YW 835
           D   +HHF+ GVCSCGD  YW
Sbjct: 852 DVEEYHHFKDGVCSCGDEGYW 872



 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 199/579 (34%), Positives = 321/579 (55%), Gaps = 13/579 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ + G++LDA  +F K+S+R VF+WN ++G Y   G     L  Y RM    I  + +T
Sbjct: 141 MFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYT 200

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V+K CA + D+  G +IH  V++ G++S   + N+L+ MY KC D   AR LFD+M 
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKM- 259

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D + WN++IS Y  +G  LE L LF  M+ + +  +  T      ACE    E LG 
Sbjct: 260 PKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGR 319

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   VKS     + + N+LI MY+  G++ EA  V  ++E+KD VSW +M+   V + 
Sbjct: 320 GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  KA++ ++ ++  G  PD++  V+ +SA   +G+L  G  LH  AIK G VS + + N
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSN 439

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMY+KC CV+    VF  ++ ++ +SWT++I G   NN   +AL  FR ++ E +  
Sbjct: 440 SLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-ESMKP 498

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           + + + SVL AC+ +  + + KEIH + +R G+  D  + NAI+D+Y +CG    + N F
Sbjct: 499 NSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF 558

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            S + KDV +W  +++ Y   G A  A+ELF  M E  +  D IT +S L A S   ++ 
Sbjct: 559 NS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVT 617

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           +G E    I++  +NL  ++   + +VD+  R G LD A      +  + D  +W +++N
Sbjct: 618 EGLEYFN-IMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLN 676

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           A  +H     G++A    ++ + +S    +   L  LYA
Sbjct: 677 ACRIHRNVELGEIAAKRVFEKDNKSVG--YYILLCNLYA 713


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 285/838 (34%), Positives = 462/838 (55%), Gaps = 97/838 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G V DA ++FDK+S+R VF+W A++  Y   G+    ++ +  M   G+  D F 
Sbjct: 133 VYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFV 192

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V KAC+ LK+   G  ++  +L  G++    +  S++ M+ KC     AR+ F+ + 
Sbjct: 193 FPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI- 251

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E +DV +WN ++S Y++ G+  +AL    +M+  G+  +  T+                 
Sbjct: 252 EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW----------------- 294

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-----NKDSVSWNSMLTG 235
                             NA+I+ YA+ G+  EA+    ++        + VSW +++ G
Sbjct: 295 ------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK-QGFVS 294
             QN    +A+  FR++   G KP+ +   +AVSA   L  L +G+E+H Y IK +   S
Sbjct: 337 SEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDS 396

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           DL +GN+L+D YAKC  V    R F  +   D +SW  ++AGYA    H +A+EL   ++
Sbjct: 397 DLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK 456

Query: 355 LEGLDADVMI-----------------------------------IGSVLMACSGLKCMS 379
            +G++ D++                                    I   L AC  ++ + 
Sbjct: 457 FQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLK 516

Query: 380 QTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             KEIHGY++R  +     + +A++ +Y  C +++ + +VF  + ++DVV W S+IS+  
Sbjct: 517 LGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACA 576

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            +G +  AL+L   MN +NVE +++T+VSAL A S L+ L++GKE++ FIIR G +    
Sbjct: 577 QSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNF 636

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           + +SL+DMY RCG++  + ++F+ +  +DL+ W  MI+  G+HG G  A++LF       
Sbjct: 637 ILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMG 696

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
             P+HITF  LL ACSHSGLI EG K+ ++M+ +Y +DP  E YAC+VDLL RA    E 
Sbjct: 697 LKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNET 756

Query: 619 YQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
            +F+  M  EP A VW +LLGACR+H N +L E  A+ L EL+P + GNYVL++N+++A+
Sbjct: 757 LEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAA 816

Query: 679 RKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKL 738
            +W+D  ++R  M+  G+ K PG SWIE+  K+HSF+  D SH   ++I  K  ++    
Sbjct: 817 GRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISGKDGKL---- 872

Query: 739 EREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
                          +V+E+EK   L GHSE++A+A+G++ +T G+ +RI KNLRV V
Sbjct: 873 ---------------DVDEDEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKNLRVSV 915



 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 161/596 (27%), Positives = 289/596 (48%), Gaps = 71/596 (11%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +++ C  L +L  G ++H  ++  G D  +F+ + L+ +Y +      AR++FD+M 
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +V  W +I+  Y   G   E + LF  M   G+  + + F    +AC +     +G 
Sbjct: 152 ER-NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +++   +  G      V  +++ M+ +CG+M  A     ++E KD   WN M++G+    
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + KA++   +++ +G KPDQV     +S   + G     +E   Y ++ G + D +   
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQF---EEASKYFLEMGGLKDFK--- 324

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
                                    + +SWT +IAG  QN    +AL +FR + LEG+  
Sbjct: 325 ------------------------PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKP 360

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYSRNV 418
           + + I S + AC+ L  +   +EIHGY I+  +  SDL++ N++VD Y KC +++ +R  
Sbjct: 361 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK 420

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI--------------- 463
           F  I+  D+VSW +M++ Y   G   EA+EL   M    +E D I               
Sbjct: 421 FGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDG 480

Query: 464 --------------------TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
                               T+  AL+A   +  LK GKE++G+++R    L   V S+L
Sbjct: 481 KAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSAL 540

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           + MY+ C +L++A  VF+ + T+D+++W S+I+A    GR   A+DL  +M   +   + 
Sbjct: 541 ISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNT 600

Query: 564 ITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
           +T ++ L ACS    + +GK+  + I+RC   LD        L+D+ GR   ++++
Sbjct: 601 VTMVSALPACSKLAALRQGKEIHQFIIRCG--LDTCNFILNSLIDMYGRCGSIQKS 654



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 233/482 (48%), Gaps = 38/482 (7%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
           + + LQ C       LG ++HA  V +G ++  ++ + L+ +Y + G + +A  +  ++ 
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
            ++  SW +++  +     Y + ++ F  +   G +PD         A   L N   GK+
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           ++ Y +  GF  +  +  +++DM+ KC  ++   R F ++  +D   W  +++GY     
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI 402
             KAL+    ++L G+  D +   +++   SG     Q +E   Y +  G          
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAII---SGYAQSGQFEEASKYFLEMG---------- 318

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
                  G  D+  N         VVSWT++I+    NG   EAL +F  M    V+ +S
Sbjct: 319 -------GLKDFKPN---------VVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNS 362

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFN 521
           IT+ SA+SA ++LS+L+ G+E++G+ I+ +  + +  V +SLVD YA+C ++++A + F 
Sbjct: 363 ITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFG 422

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            ++  DL+ W +M+    L G  + AI+L  +M+ +   PD IT+  L+   +  G   +
Sbjct: 423 MIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYG---D 479

Query: 582 GKKFLEIMRCDYQ--LDPWPEHYACLVDLLGRANHL---EEAYQFVRSMQIEPTAEVWCA 636
           GK  LE  +  +   +DP     +  +   G+  +L   +E + +V    IE +  V  A
Sbjct: 480 GKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSA 539

Query: 637 LL 638
           L+
Sbjct: 540 LI 541



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 161/366 (43%), Gaps = 9/366 (2%)

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCV----NYMGRVFYQMT-AQDFISWTTIIAGYAQ 339
            +A+   F    +  + L  +  + CC+    N   +   ++T A+  I+  +      +
Sbjct: 7   PFALNSNFAIQPKGTSPLQTLPTRNCCIVASTNTKTQNLRKLTNARQRITGFSGGGSVHR 66

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL 399
           N     A  L  ++ L   D  + I  S+L  C  L  +    ++H  ++  G+     L
Sbjct: 67  NGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFL 126

Query: 400 NA-IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            + +++VY + G ++ +R +F+ +  ++V SWT+++  Y   G   E ++LFYLM    V
Sbjct: 127 GSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGV 186

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
             D         A S L   + GK++  +++  GF     V  S++DM+ +CG +DIA +
Sbjct: 187 RPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARR 246

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
            F  ++ KD+ +W  M++     G  K A+     M+     PD +T+ A++   + SG 
Sbjct: 247 FFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQ 306

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE---PTAEVWC 635
             E  K+   M       P    +  L+    +  +  EA    R M +E   P +    
Sbjct: 307 FEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIA 366

Query: 636 ALLGAC 641
           + + AC
Sbjct: 367 SAVSAC 372


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 284/829 (34%), Positives = 476/829 (57%), Gaps = 10/829 (1%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  LFDK   R   ++ ++L  +  +G        +  ++ LG+ +D   F  V+K  A 
Sbjct: 50  AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L D   G ++H   +K G+     +  SLV  Y K  +F+  R +FD M E+ +VV W +
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER-NVVTWTT 168

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +IS Y+ +    E L LF  MQ  G   N++TF AAL    +      G+++H   VK+G
Sbjct: 169 LISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 228

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +  + V+N+LI +Y +CG + +A  +  + E K  V+WNSM++G+  N L  +A+  F 
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 288

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            ++    +  +    + +     L  L   ++LH   +K GFV D  I   LM  Y+KC 
Sbjct: 289 SMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCM 348

Query: 311 CVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
            +    R+F +     + +SWT +I+G+ QN+   +A+ LF  ++ +G+  +      +L
Sbjct: 349 AMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVIL 408

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            A   L  +S + E+H  +++        +  A++D Y K G +D +  VF  I++KD+V
Sbjct: 409 TA---LPVISPS-EVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIV 464

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILKKGKELNGF 487
           +W++M++ Y   G    A+++F  + +  V+ +  T  S L+  A++ + + +GK+ +GF
Sbjct: 465 AWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGF 524

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
            I+   +    V+S+L+ MYA+ G ++ A +VF   + KDL+ W SMI+    HG+   A
Sbjct: 525 AIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 584

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           +D+F +M+      D +TF+ +  AC+H+GL+ EG+K+ +IM  D ++ P  EH +C+VD
Sbjct: 585 LDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 644

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
           L  RA  LE+A + + +M     + +W  +L ACRVH   ELG + A+K++ + P +   
Sbjct: 645 LYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAA 704

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
           YVL+SN++A S  W++  +VR  M    +KK PG SWIE+ NK ++F+A D+SH   D+I
Sbjct: 705 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQI 764

Query: 728 YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIR 787
           Y KL +++ +L ++ GY   T +VL ++++E K  +L  HSERLAIA+G++ + +GS + 
Sbjct: 765 YMKLEDLSTRL-KDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLL 823

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA-GVCSCGDYW 835
           I KNLRVC DCH   KL++++  RE+VVRD+NRFHHF + GVCSCGD+W
Sbjct: 824 IIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 178/598 (29%), Positives = 308/598 (51%), Gaps = 21/598 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K  +  D   +FD++ +R V TW  ++  Y  N     VL  + RM+  G   ++FTF
Sbjct: 142 YMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTF 201

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              +   A       G ++H +V+K G D T  + NSL+ +Y KC + RKAR LFD+  E
Sbjct: 202 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKT-E 260

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            + VV WNS+IS Y+A+G  LEALG+F  M+   +  +  +F + ++ C +        +
Sbjct: 261 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQ 320

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ---LENKDSVSWNSMLTGFVQ 238
           +H + VK G      +  AL+  Y++C  M +A  +  +   L N   VSW +M++GF+Q
Sbjct: 321 LHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGN--VVSWTAMISGFLQ 378

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           ND   +A+  F E++  G +P++      ++A      +++  E+HA  +K  +     +
Sbjct: 379 NDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTV 434

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G  L+D Y K   V+   +VF  +  +D ++W+ ++AGYAQ      A+++F  +   G+
Sbjct: 435 GTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGV 494

Query: 359 DADVMIIGSVLMACSGLKC-MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
             +     S+L  C+     M Q K+ HG+ I+  L S L + +A++ +Y K G+I+ + 
Sbjct: 495 KPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAE 554

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF+    KD+VSW SMIS Y  +G A +AL++F  M +  V+ DS+T +   +A +   
Sbjct: 555 EVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAG 614

Query: 477 ILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTSM 534
           ++++G++    ++R           S +VD+Y+R G L+ A KV  N        +W ++
Sbjct: 615 LVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTI 674

Query: 535 INANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           + A  +H +   G++A +    M  E  A      L+ +YA   SG   E  K  ++M
Sbjct: 675 LAACRVHKKTELGRLAAEKIIAMIPEDSAA--YVLLSNMYA--ESGDWQERAKVRKLM 728



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 225/427 (52%), Gaps = 7/427 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG+V  A  LFDK   ++V TWN+M+  Y +NG  L  L  +  MR+  + +   +
Sbjct: 242 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESS 301

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IK CA LK+L    ++H  V+K G+     I  +L+  Y+KC     A +LF   G
Sbjct: 302 FASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETG 361

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              +VV W ++IS +  +    EA+GLF EM+R G+  N +T+   L A    S      
Sbjct: 362 FLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVIS----PS 417

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+HA  VK+       V  AL+  Y + GK+ EAA V   ++NKD V+W++ML G+ Q  
Sbjct: 418 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAG 477

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSA-SGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               A++ F EL   G KP++    + ++  +    ++  GK+ H +AIK    S L + 
Sbjct: 478 ETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVS 537

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           + L+ MYAK   +     VF +   +D +SW ++I+GYAQ+   +KAL++F+ ++   + 
Sbjct: 538 SALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 597

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILNA-IVDVYGKCGNIDYSRN 417
            D +    V  AC+    + + ++    ++R   ++     N+ +VD+Y + G ++ +  
Sbjct: 598 MDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 657

Query: 418 VFESIES 424
           V +++ +
Sbjct: 658 VIDNMPN 664



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 139/263 (52%), Gaps = 1/263 (0%)

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           Y   +F +   +D  S+T+++ G++++    +A  LF  +Q  G++ D  I  SVL   +
Sbjct: 49  YAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSA 108

Query: 374 GLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L      +++H   I+ G L D+ +  ++VD Y K  N    RNVF+ ++ ++VV+WT+
Sbjct: 109 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTT 168

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           +IS Y  N L  E L LF  M +   + +S T  +AL   +   +  +G +++  +++ G
Sbjct: 169 LISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 228

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
            +    V++SL+++Y +CG +  A  +F+  + K ++ W SMI+    +G    A+ +FY
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 288

Query: 553 KMEAESFAPDHITFLALLYACSH 575
            M          +F +++  C++
Sbjct: 289 SMRLNHVRLSESSFASIIKLCAN 311



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 84/169 (49%)

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           Y+ N+F+    +D  S+TS++  +  +G   EA  LF  +    +E D     S L  ++
Sbjct: 49  YAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSA 108

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           +L     G++L+   I+ GF  + SV +SLVD Y +         VF+ ++ ++++ WT+
Sbjct: 109 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTT 168

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +I+    +   +  + LF +M+ E   P+  TF A L   +  G+   G
Sbjct: 169 LISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRG 217


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 281/728 (38%), Positives = 439/728 (60%), Gaps = 6/728 (0%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           ++QLFD    ++ +   N ++  +S + Q  EAL LF  ++R G  T+  +    L+ C 
Sbjct: 45  SQQLFDET-PQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
                 +G ++H   +K G    V V  +L+ MY +   + +   V  ++  K+ VSW S
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           +L G+ QN L  +A++ F ++Q  G KP+       +      G +  G ++H   IK G
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
             S + +GN++++MY+K   V+    VF  M  ++ +SW ++IAG+  N   L+A ELF 
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCG 410
            ++LEG+     I  +V+  C+ +K MS  K++H  +I+ G   DL I  A++  Y KC 
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343

Query: 411 NIDYSRNVFESIES-KDVVSWTSMISSYVHNGLANEALELFYLMN-EANVESDSITLVSA 468
            ID +  +F  +   ++VVSWT++IS YV NG  + A+ LF  M  E  VE +  T  S 
Sbjct: 344 EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSV 403

Query: 469 LSA-ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
           L+A A+  + +++GK+ +   I+ GF+    V+S+LV MYA+ G ++ AN+VF     +D
Sbjct: 404 LNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRD 463

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           L+ W SMI+    HG GK ++ +F +M +++   D ITF+ ++ AC+H+GL+NEG+++ +
Sbjct: 464 LVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFD 523

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
           +M  DY + P  EHY+C+VDL  RA  LE+A   +  M     A +W  LL ACRVH N 
Sbjct: 524 LMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNV 583

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           +LGE+ A+KL+ L P +   YVL+SN++A +  W++  +VR  M    +KK  G SWIE+
Sbjct: 584 QLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEV 643

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGH 767
            NK  SF+A D SH +SD IY KL E++ +L ++ GY   T++VLH+VEEE K  +L  H
Sbjct: 644 KNKTFSFMAGDLSHPQSDRIYLKLEELSIRL-KDAGYYPDTKYVLHDVEEEHKEVILSQH 702

Query: 768 SERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
           SERLAIA+G++ +  G+ I+I KNLRVC DCH+  KL+S++ GR++VVRD+NRFHHF+ G
Sbjct: 703 SERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGG 762

Query: 828 VCSCGDYW 835
            CSCGDYW
Sbjct: 763 SCSCGDYW 770



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 166/538 (30%), Positives = 282/538 (52%), Gaps = 9/538 (1%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           ++QLFD+  Q+ +   N +L  +  N +    L  +  +R  G   D  +  CV+K C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L D   G ++H   +KCG+     +  SLV MY K        ++FD M  K +VV W S
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVK-NVVSWTS 163

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +++ Y  +G   +AL LF +MQ  G+  N +TF A L           G+++H   +KSG
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +  ++V N+++ MY++   +++A  V   +EN+++VSWNSM+ GFV N L  +A + F 
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            ++  G K  Q      +     +  +   K+LH   IK G   DL I   LM  Y+KC 
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343

Query: 311 CVNYMGRVFYQMTA-QDFISWTTIIAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSV 368
            ++   ++F  M   Q+ +SWT II+GY QN    +A+ LF +  + EG++ +     SV
Sbjct: 344 EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSV 403

Query: 369 LMACSG-LKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           L AC+     + Q K+ H   I+ G S+ L + +A+V +Y K GNI+ +  VF+    +D
Sbjct: 404 LNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRD 463

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
           +VSW SMIS Y  +G   ++L++F  M   N+E D IT +  +SA +   ++ +G+    
Sbjct: 464 LVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFD 523

Query: 487 FIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLH 541
            ++ K +++  ++   S +VD+Y+R G L+ A  + N +       +W +++ A  +H
Sbjct: 524 LMV-KDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 580



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 234/427 (54%), Gaps = 6/427 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K  SV D E++FD++  + V +W ++L  Y  NG   + L+ +S+M++ GI  + FT
Sbjct: 136 MYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFT 195

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+   A    ++ G ++H +V+K G DST F+ NS+V MY+K      A+ +FD M 
Sbjct: 196 FAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM- 254

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  + V WNS+I+ +  +G  LEA  LF  M+  G+      F   ++ C +    +   
Sbjct: 255 ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAK 314

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLTGFVQN 239
           ++H   +K+G +  + +  AL+  Y++C ++ +A  +   +   ++ VSW ++++G+VQN
Sbjct: 315 QLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQN 374

Query: 240 DLYCKAMQFFRELQG-AGQKPDQVCTVNAVSA-SGRLGNLLNGKELHAYAIKQGFVSDLQ 297
               +AM  F +++   G +P++    + ++A +    ++  GK+ H+ +IK GF + L 
Sbjct: 375 GRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALC 434

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + + L+ MYAK   +     VF +   +D +SW ++I+GYAQ+ C  K+L++F  ++ + 
Sbjct: 435 VSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKN 494

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYS 415
           L+ D +    V+ AC+    +++ +     +++    +  +   + +VD+Y + G ++ +
Sbjct: 495 LELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKA 554

Query: 416 RNVFESI 422
            ++   +
Sbjct: 555 MDLINKM 561



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 189/367 (51%), Gaps = 12/367 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   V DA+ +FD +  R   +WN+M+  +V+NG  L   E + RMR+ G+ +    
Sbjct: 237 MYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTI 296

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VIK CA +K++    ++H  V+K G D    I  +L+  Y+KC +   A +LF  M 
Sbjct: 297 FATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMH 356

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQAC--EDSSFET 177
             ++VV W +IIS Y  +G+   A+ LF +M+R  G+  N +TF + L AC    +S E 
Sbjct: 357 GVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQ 416

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G + H+ ++KSG +  + V++AL+ MYA+ G +  A  V  +  ++D VSWNSM++G+ 
Sbjct: 417 -GKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYA 475

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q+    K+++ F E++    + D +  +  +SA    G +  G+      +K     D  
Sbjct: 476 QHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK-----DYH 530

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           I  T M+ Y+  C V+   R      A D I+     AG       L A  +   VQL  
Sbjct: 531 IVPT-MEHYS--CMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGE 587

Query: 358 LDADVMI 364
           L A+ +I
Sbjct: 588 LAAEKLI 594



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 86/169 (50%)

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           +S+ +F+    + +     ++  +  N    EAL LF  +  +   +D  +L   L    
Sbjct: 44  HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            L     GK+++   I+ GF  + SV +SLVDMY +  +++   +VF+ ++ K+++ WTS
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           ++     +G  + A+ LF +M+ E   P+  TF A+L   +  G + +G
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKG 212


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 277/779 (35%), Positives = 453/779 (58%), Gaps = 77/779 (9%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+  V++ CA LK L  G K+H ++        + +   LV+ YA C D ++ R++FD M
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK++V LWN ++S Y+  G   E++ LF+ M   G+                       
Sbjct: 161 -EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE---------------------- 197

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY-QLENKDSVSWNSMLTGFVQ 238
                                        GK  E+A  L+ +L ++D +SWNSM++G+V 
Sbjct: 198 -----------------------------GKRPESASELFDKLCDRDVISWNSMISGYVS 228

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N L  + +  ++++   G   D    ++ +      G L  GK +H+ AIK  F   +  
Sbjct: 229 NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF 288

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            NTL+DMY+KC  ++   RVF +M  ++ +SWT++IAGY ++     A+ L + ++ EG+
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGV 348

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             DV+ I S+L AC+    +   K++H YI    + S+L + NA++D+Y KCG+++ + +
Sbjct: 349 KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANS 408

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF ++  KD++SW +M+                       ++ DS T+   L A +SLS 
Sbjct: 409 VFSTMVVKDIISWNTMV---------------------GELKPDSRTMACILPACASLSA 447

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L++GKE++G+I+R G++ +  VA++LVD+Y +CG L +A  +F+ + +KDL+ WT MI  
Sbjct: 448 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAG 507

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G+HG G  AI  F +M      PD ++F+++LYACSHSGL+ +G +F  IM+ D+ ++P
Sbjct: 508 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEP 567

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHYAC+VDLL R  +L +AY+F+ ++ I P A +W ALL  CR++ + EL E VA+++
Sbjct: 568 KLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERV 627

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA- 716
            EL+P N G YVL++N++A + K ++V+++R ++   GL+K PG SWIEI  +++ F++ 
Sbjct: 628 FELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSG 687

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            + SH  S +I   L ++  K++ EG Y  +T++ L N +E +K   L GHSE+LA+A+G
Sbjct: 688 NNSSHPHSKKIESLLKKMRRKMKEEG-YFPKTKYALINADEMQKEMALCGHSEKLAMAFG 746

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +L       IR+TKNLRVC DCH   K +S+   RE+V+RD+NRFHHF+ G CSC  +W
Sbjct: 747 LLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 210/428 (49%), Gaps = 27/428 (6%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A +LFDK+  R V +WN+M+  YVSNG   R L  Y +M  LGI VD  T   V+  CA 
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
              L  G  +H L +K  ++      N+L+ MY+KC D   A ++F++MGE+ +VV W S
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER-NVVSWTS 322

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I+ Y+  G    A+ L ++M++ G+  +     + L AC  S     G ++H     + 
Sbjct: 323 MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               ++V NAL+ MYA+CG M  A  V   +  KD +SWN+M+                 
Sbjct: 383 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL-------------- 428

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
                  KPD       + A   L  L  GKE+H Y ++ G+ SD  + N L+D+Y KC 
Sbjct: 429 -------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            +     +F  + ++D +SWT +IAGY  +    +A+  F  ++  G++ D +   S+L 
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS---DLVILNAIVDVYGKCGNIDYSRNVFESIE-SKD 426
           ACS    + Q      YI++   +    L     +VD+  + GN+  +    E++  + D
Sbjct: 542 ACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPD 600

Query: 427 VVSWTSMI 434
              W +++
Sbjct: 601 ATIWGALL 608



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 151/333 (45%), Gaps = 30/333 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F+K+ +R V +W +M+  Y  +G     +    +M   G+ +D   
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVA 354

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA    LD G  +H  +      S  F+ N+L+ MYAKC     A  +F  M 
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMV 414

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D++ WN+++                       L  ++ T    L AC   S    G 
Sbjct: 415 VK-DIISWNTMVGE---------------------LKPDSRTMACILPACASLSALERGK 452

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   +++G +   +VANAL+ +Y +CG +  A  +   + +KD VSW  M+ G+  + 
Sbjct: 453 EIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHG 512

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E++ AG +PD+V  ++ + A    G L  G     Y +K  F  + +   
Sbjct: 513 YGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPK--- 568

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
             ++ YA  C V+ + R      A  FI    I
Sbjct: 569 --LEHYA--CMVDLLSRTGNLSKAYKFIETLPI 597



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 3/150 (2%)

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
           ++  C  +  S     +I+ + V  + + I  +   G    A+EL  +  ++ +E+   T
Sbjct: 45  IFRSCIPVRISATPTRTIDHQ-VTDYNAKILHFCQLGDLENAMELVCMCQKSELETK--T 101

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
             S L   + L  L  GK+++  I      ++ ++   LV  YA CG L    +VF+ ++
Sbjct: 102 YGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTME 161

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            K++ LW  M++     G  K +I LF  M
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIM 191


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/694 (38%), Positives = 424/694 (61%), Gaps = 4/694 (0%)

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
           AL  F  M   G      TF + L+ C        G  +HA     G + +   A AL  
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA-GQKPDQV 262
           MYA+C +  +A  V  ++  +D V+WN+++ G+ +N L   AM+    +Q   G++PD +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
             V+ + A      L   +E HA+AI+ G    + +   ++D Y KC  +     VF  M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
             ++ +SW  +I GYAQN    +AL LF  +  EG+D   + + + L AC  L C+ +  
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 383 EIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
            +H  ++R GL S++ ++NA++ +Y KC  +D + +VF+ ++ +  VSW +MI     NG
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
            + +A+ LF  M   NV+ DS TLVS + A + +S   + + ++G+ IR   + +  V +
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           +L+DMYA+CG ++IA  +FN  + + +I W +MI+  G HG GK A++LF +M++    P
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462

Query: 562 DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
           +  TFL++L ACSH+GL++EG+++   M+ DY L+P  EHY  +VDLLGRA  L+EA+ F
Sbjct: 463 NETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAF 522

Query: 622 VRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKW 681
           ++ M ++P   V+ A+LGAC++H N EL E  A+K+ EL P     +VL++N++A +  W
Sbjct: 523 IQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMW 582

Query: 682 KDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLERE 741
           KDV +VR  M  +GL+KTPG S I++ N+IH+F +   +H ++ EIY +LA++ E++ + 
Sbjct: 583 KDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEI-KA 641

Query: 742 GGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSF 801
            GYV  T  + H+VE++ K Q+L  HSE+LAIA+G++++  G+ I+I KNLRVC DCH+ 
Sbjct: 642 VGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNA 700

Query: 802 CKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            KL+S + GRE+++RD  RFHHF+ G CSCGDYW
Sbjct: 701 TKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/462 (32%), Positives = 241/462 (52%), Gaps = 8/462 (1%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  ++K CA   DL  G  +H  +   G DS      +L  MYAKC     AR++FDRM
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETL 178
             + D V WN++++ Y+ +G    A+ +   MQ   G   ++ T V+ L AC ++     
Sbjct: 121 PVR-DRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA 179

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
             E HA  ++SG    V VA A++  Y +CG +  A  V   +  K+SVSWN+M+ G+ Q
Sbjct: 180 CREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQ 239

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N    +A+  F  +   G     V  + A+ A G LG L  G  +H   ++ G  S++ +
Sbjct: 240 NGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV 299

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+ MY+KC  V+    VF ++  +  +SW  +I G AQN C   A+ LF  +QLE +
Sbjct: 300 MNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENV 359

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D   + SV+ A + +    Q + IHGY IR  L  D+ +L A++D+Y KCG ++ +R 
Sbjct: 360 KPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARI 419

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F S   + V++W +MI  Y  +G    A+ELF  M    +  +  T +S LSA S   +
Sbjct: 420 LFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGL 479

Query: 478 LKKGKELNGFI-IRKGFNLEGSVA--SSLVDMYARCGALDIA 516
           + +G+E   F  +++ + LE  +    ++VD+  R G LD A
Sbjct: 480 VDEGREY--FTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 204/419 (48%), Gaps = 10/419 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           MY KC    DA ++FD++  R    WNA++  Y  NG     +E   RM+   G   D+ 
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V+ ACA  + L    + H   ++ G +    +  +++  Y KC D R AR +FD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K  V  WN++I  Y+ +G   EAL LF  M   G+     + +AALQAC +      G
Sbjct: 223 PTKNSVS-WNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           M +H   V+ G +  V V NALI MY++C ++  A+ V  +L+ +  VSWN+M+ G  QN
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A++ F  +Q    KPD    V+ + A   + + L  + +H Y+I+     D+ + 
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+DMYAKC  VN    +F     +  I+W  +I GY  +     A+ELF  ++  G+ 
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAIVDVYGKCGNID 413
            +     SVL ACS    + + +E        Y +  G+        +VD+ G+ G +D
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEH---YGTMVDLLGRAGKLD 517


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 295/856 (34%), Positives = 501/856 (58%), Gaps = 29/856 (3%)

Query: 1    MYGKC-GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD-- 57
            MY  C GS+ DA ++FD++  R   TWN+++  Y   G+ +   + +S M++ G+ ++  
Sbjct: 287  MYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLR 346

Query: 58   --AFTFPCVIKACAMLKDLDCGAKIHGLVL----KCGYDSTDFIVNSLVAMYAKCYDFRK 111
               +T   ++ A   L D  CG  +   +L    K G+    ++ ++LV  +A+      
Sbjct: 347  PNEYTLCSLVTAACSLAD--CGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDC 404

Query: 112  ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
            A+ +F +M ++  V + N ++   +   Q  EA  +F+EM+ + +  N+ + V  L    
Sbjct: 405  AKMIFKQMYDRNAVTM-NGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTF- 461

Query: 172  DSSFETL------GMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
             + F  L      G E+HA   +SG  + ++ + NAL+ MY +C  +  A  V   + +K
Sbjct: 462  -TEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSK 520

Query: 225  DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
            D+VSWNSM++G   N+ + +A+  F  ++  G  P     ++ +S+   LG L  G+++H
Sbjct: 521  DTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIH 580

Query: 285  AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH- 343
                K G   D+ + N L+ +YA+   +N   +VF+QM   D +SW + I   A+     
Sbjct: 581  GEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASV 640

Query: 344  LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAI 402
            L+AL+ F  +   G   + +   ++L A S    +    +IH  I++  ++D   I NA+
Sbjct: 641  LQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENAL 700

Query: 403  VDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
            +  YGKC  ++    +F  + E +D VSW SMIS Y+H+G+ ++A++L + M +   + D
Sbjct: 701  LAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLD 760

Query: 462  SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
              T  + LSA +S++ L++G E++   +R     +  V S+LVDMYA+CG +D A++ F 
Sbjct: 761  GFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFE 820

Query: 522  CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
             +  +++  W SMI+    HG G+ A+ +F +M+    +PDH+TF+ +L ACSH GL++E
Sbjct: 821  LMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDE 880

Query: 582  GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA- 640
            G K  + M   Y L P  EH++C+VDLLGRA  +++   F+++M ++P   +W  +LGA 
Sbjct: 881  GYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGAC 940

Query: 641  CRVHS-NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
            CR +  N ELG+  AK L+EL+P N  NYVL+SN+ AA   W+DV + R+ MR + +KK 
Sbjct: 941  CRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKD 1000

Query: 700  PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
             G SW+ + + +H F+A D++H E ++IY+KL E+  K+ R+ GYV +T++ L+++E E 
Sbjct: 1001 AGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKI-RDAGYVPETKYALYDLELEN 1059

Query: 760  KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDAN 819
            K ++L  HSE+LAIA+ + + +E   IRI KNLRVC DCH+  K +S++ GR++++RD+N
Sbjct: 1060 KEELLSYHSEKLAIAFVLTRKSELP-IRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSN 1118

Query: 820  RFHHFEAGVCSCGDYW 835
            RFHHF  G+CSCGDYW
Sbjct: 1119 RFHHFGGGMCSCGDYW 1134



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 169/647 (26%), Positives = 313/647 (48%), Gaps = 24/647 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G+++ A +LFD++ Q+ + +W+ ++  Y  N  P      +  +   G+  + F 
Sbjct: 184 IYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFA 243

Query: 61  FPCVIKACAML--KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY-DFRKARQLFD 117
               ++AC       +  G +IH  + K    S   + N L++MY+ C      A ++FD
Sbjct: 244 VGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFD 303

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG----LVTNAYTFVAALQ-ACED 172
            +  +  V  WNSIIS Y   G  + A  LF  MQ  G    L  N YT  + +  AC  
Sbjct: 304 EIKFRNSVT-WNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSL 362

Query: 173 SSFETLGMEIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           +    + +E     + KSG    +YV +AL+  +AR G M  A  +  Q+ ++++V+ N 
Sbjct: 363 ADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNG 422

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK----ELHAYA 287
           ++ G  +     +A + F+E++   +   +   V  +S      NL  GK    E+HAY 
Sbjct: 423 LMVGLARQHQGEEAAKVFKEMKDLVEINSESLVV-LLSTFTEFSNLKEGKRKGQEVHAYL 481

Query: 288 IKQGFV-SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            + G V + + IGN L++MY KC  ++    VF  M ++D +SW ++I+G   N    +A
Sbjct: 482 FRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEA 541

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDV 405
           +  F T++  G+      + S L +CS L  ++  ++IHG   + GL  D+ + NA++ +
Sbjct: 542 VSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTL 601

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYV-HNGLANEALELFYLMNEANVESDSIT 464
           Y +  +I+  + VF  +   D VSW S I +   +     +AL+ F  M +A    + +T
Sbjct: 602 YAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVT 661

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV- 523
            ++ L+A SS S+L  G +++  I++     + ++ ++L+  Y +C  ++    +F+ + 
Sbjct: 662 FINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMS 721

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           + +D + W SMI+     G    A+DL + M       D  TF  +L AC+    +  G 
Sbjct: 722 ERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERG- 780

Query: 584 KFLEIMRCDYQ--LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
             +E+  C  +  L+      + LVD+  +   ++ A +F   M + 
Sbjct: 781 --MEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVR 825



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 149/520 (28%), Positives = 284/520 (54%), Gaps = 16/520 (3%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +H  + K G+    F  N+L+ +Y +  +   AR+LFD M +K ++V W+ +IS Y+ + 
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQK-NLVSWSCLISGYTQNR 220

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACED--SSFETLGMEIHAATVKSGQNLQVYV 197
              EA  LF+ +   GL+ N +   +AL+AC+   S+   LGM+IHA   K      + +
Sbjct: 221 MPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMIL 280

Query: 198 ANALIAMYARC-GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           +N L++MY+ C G + +A  V  +++ ++SV+WNS+++ + +      A + F  +Q  G
Sbjct: 281 SNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEG 340

Query: 257 ----QKPDQVCTVNAVSASGRLGN--LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
                +P++    + V+A+  L +  L+  +++     K GF+ DL +G+ L++ +A+  
Sbjct: 341 VELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYG 400

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ--LEGLDADVMIIGSV 368
            ++    +F QM  ++ ++   ++ G A+ +   +A ++F+ ++  +E     ++++ S 
Sbjct: 401 LMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLST 460

Query: 369 LMACSGLK-CMSQTKEIHGYIIRKGLSD--LVILNAIVDVYGKCGNIDYSRNVFESIESK 425
               S LK    + +E+H Y+ R GL D  + I NA+V++YGKC  ID + +VF+ + SK
Sbjct: 461 FTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSK 520

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           D VSW SMIS   HN    EA+  F+ M    +   + +++S LS+ SSL  L  G++++
Sbjct: 521 DTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIH 580

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
           G   + G +L+ SV+++L+ +YA   +++   KVF  +   D + W S I A   +    
Sbjct: 581 GEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASV 640

Query: 546 V-AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           + A+  F +M    + P+ +TF+ +L A S   ++  G +
Sbjct: 641 LQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQ 680



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 165/319 (51%), Gaps = 11/319 (3%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +L +   LH    K GF  D+   NTL+++Y +   +    ++F +M  ++ +SW+ +I+
Sbjct: 155 SLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLIS 214

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS--GLKCMSQTKEIHGYIIR-KG 392
           GY QN    +A  LF+ V   GL  +   +GS L AC   G   +    +IH +I +   
Sbjct: 215 GYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPC 274

Query: 393 LSDLVILNAIVDVYGKC-GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
           +SD+++ N ++ +Y  C G+ID +  VF+ I+ ++ V+W S+IS Y   G A  A +LF 
Sbjct: 275 VSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFS 334

Query: 452 LMN----EANVESDSITLVSALSAASSLSI--LKKGKELNGFIIRKGFNLEGSVASSLVD 505
           +M     E N+  +  TL S ++AA SL+   L   +++   I + GF  +  V S+LV+
Sbjct: 335 VMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVN 394

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
            +AR G +D A  +F  +  ++ +    ++       +G+ A  +F +M+ +    +  +
Sbjct: 395 GFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK-DLVEINSES 453

Query: 566 FLALLYACSHSGLINEGKK 584
            + LL   +    + EGK+
Sbjct: 454 LVVLLSTFTEFSNLKEGKR 472



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 48/102 (47%)

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           S L     L+  + + GF  +    ++L+++Y R G L  A K+F+ +  K+L+ W+ +I
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           +    +     A  LF  + +    P+H    + L AC   G
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 284/747 (38%), Positives = 425/747 (56%), Gaps = 64/747 (8%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M R G   + +T    L+AC +      G   H     +G    V++ NAL+AMY+RCG 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 211 MTEAAGVLYQLENK---DSVSWNSMLTGFVQNDLYCKAMQFFREL------QGAGQKPDQ 261
           + EA+ +  ++  +   D +SWNS+++  V++     A+  F ++      +   ++ D 
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
           +  VN + A G L  +   KE+H  AI+ G   D+ +GN L+D YAKC  +    +VF  
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 322 MTAQDFISW-----------------------------------TTIIAGYAQNNCHLKA 346
           M  +D +SW                                   T +IAGY+Q  C  +A
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-----------SD 395
           L +FR +   G   + + I SVL AC+ L   SQ  EIH Y ++  L            D
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNGLANEALELFYLM 453
           L++ NA++D+Y KC +   +R++F+ I  E ++VV+WT MI  +   G +N+AL+LF  M
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360

Query: 454 --NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS---VASSLVDMYA 508
                 V  ++ T+   L A + L+ ++ GK+++ +++R     + S   VA+ L++MY+
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH-HQYDSSAYFVANCLINMYS 419

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           +CG +D A  VF+ +  K  I WTSM+   G+HGRG  A+D+F KM    F PD ITFL 
Sbjct: 420 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 479

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +LYACSH G++++G  + + M  DY L P  EHYA  +DLL R   L++A++ V+ M +E
Sbjct: 480 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPME 539

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
           PTA VW ALL ACRVHSN EL E    KL+E++  N G+Y LISN++A + +WKDV ++R
Sbjct: 540 PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIR 599

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
             M+ SG+KK PG SW++      SF   D+SH  S +IY  L  + +++ +  GYV +T
Sbjct: 600 HLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRI-KAMGYVPET 658

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
            F LH+V+EEEK  +L  HSE+LA+AYG+L +  G  IRITKNLRVC DCHS    +S++
Sbjct: 659 NFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKI 718

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
              E+VVRD +RFHHF+ G CSCG YW
Sbjct: 719 VDHEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 173/571 (30%), Positives = 284/571 (49%), Gaps = 65/571 (11%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G  +D FT P V+KAC  L    CG+  HGL+   G++S  FI N+LVAMY++C    +A
Sbjct: 5   GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 64

Query: 113 RQLFDRMGEK--EDVVLWNSIISAYSASGQCLEALGLFREM------QRVGLVTNAYTFV 164
             +FD + ++  +DV+ WNSI+SA+  S     AL LF +M      +     ++  + V
Sbjct: 65  SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 124

Query: 165 AALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
             L AC          E+H   +++G  L V+V NALI  YA+CG M  A  V   +E K
Sbjct: 125 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 184

Query: 225 DSVSWNSMLTGFVQNDLY---------------------------------C--KAMQFF 249
           D VSWN+M+ G+ Q+  +                                 C  +A+  F
Sbjct: 185 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 244

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS----------DLQIG 299
           R++  +G  P+ V  ++ +SA   LG    G E+HAY++K   ++          DL + 
Sbjct: 245 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 304

Query: 300 NTLMDMYAKCCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE- 356
           N L+DMY+KC        +F    +  ++ ++WT +I G+AQ      AL+LF  +  E 
Sbjct: 305 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 364

Query: 357 -GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD---LVILNAIVDVYGKCGNI 412
            G+  +   I  +LMAC+ L  +   K+IH Y++R    D     + N ++++Y KCG++
Sbjct: 365 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDV 424

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D +R+VF+S+  K  +SWTSM++ Y  +G  +EAL++F  M +A    D IT +  L A 
Sbjct: 425 DTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC 484

Query: 473 SSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK-VFNCVQTKDLIL 530
           S   ++ +G    +      G        +  +D+ AR G LD A K V +       ++
Sbjct: 485 SHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVV 544

Query: 531 WTSMINANGLHGRGKV---AIDLFYKMEAES 558
           W ++++A  +H   ++   A++   +M AE+
Sbjct: 545 WVALLSACRVHSNVELAEHALNKLVEMNAEN 575



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 252/549 (45%), Gaps = 89/549 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR---TVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----- 52
           MY +CGS+ +A  +FD+++QR    V +WN+++ A+V +      L+ +S+M ++     
Sbjct: 54  MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 113

Query: 53  -GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY---- 107
                D  +   ++ AC  LK +    ++HG  ++ G     F+ N+L+  YAKC     
Sbjct: 114 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMEN 173

Query: 108 ---------------------------DFRKARQLFDRMGEKE---DVVLWNSIISAYSA 137
                                      +F+ A +LF  M ++    D+V W ++I+ YS 
Sbjct: 174 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQ 233

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS-------- 189
            G   EAL +FR+M   G + N  T ++ L AC      + GMEIHA ++K+        
Sbjct: 234 RGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDND 293

Query: 190 --GQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQNDLYCKA 245
             G++  + V NALI MY++C     A  +     LE ++ V+W  M+ G  Q      A
Sbjct: 294 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 353

Query: 246 MQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK--QGFVSDLQIGNT 301
           ++ F E+  +  G  P+       + A   L  +  GK++HAY ++  Q   S   + N 
Sbjct: 354 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANC 413

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L++MY+KC  V+    VF  M+ +  ISWT+++ GY  +    +AL++F  ++  G   D
Sbjct: 414 LINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 473

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------------IVDVYGK 408
            +    VL ACS           H  ++ +GLS    ++A              +D+  +
Sbjct: 474 DITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLAR 522

Query: 409 CGNIDYS-RNVFESIESKDVVSWTSMISS-YVHNG--LANEALELFYLMNEANVESDSIT 464
            G +D + + V +       V W +++S+  VH+   LA  AL     MN  N    S T
Sbjct: 523 FGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN--DGSYT 580

Query: 465 LVSALSAAS 473
           L+S + A +
Sbjct: 581 LISNIYATA 589


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 274/798 (34%), Positives = 457/798 (57%), Gaps = 9/798 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G VL A ++F+++S R   +W AML  Y  NG     L  Y +M   G+    + 
Sbjct: 86  LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV 145

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +C   +    G  IH    K G+ S  F+ N+++ +Y +C  FR A ++F  M 
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V +N++IS ++  G    AL +F EMQ  GL  +  T  + L AC        G 
Sbjct: 206 HR-DTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGT 264

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+   K+G +    +  +L+ +Y +CG +  A  +    +  + V WN ML  F Q +
Sbjct: 265 QLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324

Query: 241 LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
              K+ + F ++Q AG +P+Q    C +   + +  +     G+++H+ ++K GF SD+ 
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL---GEQIHSLSVKTGFESDMY 381

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +   L+DMY+K   +    RV   +  +D +SWT++IAGY Q+ C   AL  F+ +Q  G
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           +  D + + S +  C+G+  M Q  +IH  I   G S D+ I NA+V++Y +CG I  + 
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           + FE IE KD ++W  ++S +  +GL  EAL++F  M+++ V+ +  T VSALSA+++L+
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            +K+GK+++  +I+ G + E  V ++L+ +Y +CG+ + A   F+ +  ++ + W ++I 
Sbjct: 562 EIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIIT 621

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           +   HGRG  A+DLF +M+ E   P+ +TF+ +L ACSH GL+ EG  + + M  +Y + 
Sbjct: 622 SCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIR 681

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P P+HYAC++D+ GRA  L+ A +F+  M I   A VW  LL AC+VH N E+GE  AK 
Sbjct: 682 PRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKH 741

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           LLEL+P +  +YVL+SN +A + KW + +QVR  MR  G++K PG SWIE+ N +H+F  
Sbjct: 742 LLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFV 801

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D+ H  +++IY  LA I +++ +  GY  +   + H+ E+E +      HSE+LA+ +G
Sbjct: 802 GDRLHPLAEQIYNFLAVINDRVAKV-GYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFG 860

Query: 777 VLKSTEGSLIRITKNLRV 794
           ++       +R+ KNLRV
Sbjct: 861 LMSLPPCMPLRVIKNLRV 878



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 169/630 (26%), Positives = 319/630 (50%), Gaps = 7/630 (1%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKAC-AMLKDLDC 76
           +++R   +    L  ++++ +P +VL  ++        +    F C ++AC    +    
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
             +IH   +  G      + N L+ +Y+K      AR++F+ +  +++V  W +++S Y+
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVS-WVAMLSGYA 119

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +G   EALGL+R+M R G+V   Y   + L +C  +     G  IHA   K G   +++
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V NA+I +Y RCG    A  V   + ++D+V++N++++G  Q      A++ F E+Q +G
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             PD V   + ++A   LG+L  G +LH+Y  K G  SD  +  +L+D+Y KC  V    
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            +F      + + W  ++  + Q N   K+ ELF  +Q  G+  +      +L  C+  +
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +   ++IH   ++ G  SD+ +   ++D+Y K G ++ +R V E ++ KDVVSWTSMI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            YV +    +AL  F  M +  +  D+I L SA+S  + ++ +++G +++  I   G++ 
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           + S+ ++LV++YARCG +  A   F  ++ KD I W  +++     G  + A+ +F +M+
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD 539

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANH 614
                 +  TF++ L A ++   I +GK+    +++  +  +   E    L+ L G+   
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFE--TEVGNALISLYGKCGS 597

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
            E+A      M  E     W  ++ +C  H
Sbjct: 598 FEDAKMEFSEMS-ERNEVSWNTIITSCSQH 626



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 161/610 (26%), Positives = 292/610 (47%), Gaps = 14/610 (2%)

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE-TLGMEIHAATVKSG 190
           ++ + A     + L LF +  R         F  AL+AC  +     +  EIHA  V  G
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
                 V N LI +Y++ G +  A  V  +L  +D+VSW +ML+G+ QN L  +A+  +R
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           ++  AG  P      + +S+  +      G+ +HA   K GF S++ +GN ++ +Y +C 
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCG 192

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
                 RVF  M  +D +++ T+I+G+AQ      ALE+F  +Q  GL  D + I S+L 
Sbjct: 193 SFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLA 252

Query: 371 ACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC+ L  + +  ++H Y+ + G+ SD ++  +++D+Y KCG+++ +  +F S +  +VV 
Sbjct: 253 ACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVL 312

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           W  M+ ++       ++ ELF  M  A +  +  T    L   +    +  G++++   +
Sbjct: 313 WNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           + GF  +  V+  L+DMY++ G L+ A +V   ++ KD++ WTSMI     H   K A+ 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDL 608
            F +M+     PD+I   + +  C+    + +G +    I    Y  D     +  LV+L
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD--VSIWNALVNL 490

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEV-WCALLGACRVHSNKELGEIVAKKLLELD-PGNPG 666
             R   + EA+      +IE   E+ W  L+      +   L E   K  + +D  G   
Sbjct: 491 YARCGRIREAFSSFE--EIEHKDEITWNGLVSG---FAQSGLHEEALKVFMRMDQSGVKH 545

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
           N     +  +AS    +++Q +     + + KT  S   E+GN + S   +  S  ++  
Sbjct: 546 NVFTFVSALSASANLAEIKQGKQIH--ARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603

Query: 727 IYKKLAEITE 736
            + +++E  E
Sbjct: 604 EFSEMSERNE 613


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 280/736 (38%), Positives = 437/736 (59%), Gaps = 9/736 (1%)

Query: 106 CYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVA 165
           C D   AR LFD++     +  +N++I AYS  G  L         +R     N YTF  
Sbjct: 76  CGDLSLARHLFDQI-PAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPF 134

Query: 166 ALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD 225
            L+AC           +H    ++G +  ++V+ AL+ +YA+C     AA V  ++  +D
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
            V+WN+ML G+  +  Y   +     +Q     P+    V  +    + G L  G+ +HA
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHA 253

Query: 286 YAIKQGFVSDLQ----IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           Y+++   + D +    +G  L+DMYAKC  + Y  RVF  M  ++ ++W+ ++ G+    
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313

Query: 342 CHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
             L+A  LF+ +  +GL       + S L AC+ L  +   K++H  + + GL +DL   
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAG 373

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N+++ +Y K G ID +  +F+ +  KD VS+++++S YV NG A+EA  +F  M   NV+
Sbjct: 374 NSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQ 433

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            D  T+VS + A S L+ L+ GK  +G +I +G   E S+ ++L+DMYA+CG +D++ ++
Sbjct: 434 PDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQI 493

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F+ +  +D++ W +MI   G+HG GK A  LF  M+ ++  PD +TF+ L+ ACSHSGL+
Sbjct: 494 FDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLV 553

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
            EGK++  +M   Y + P  EHY  +VDLL R   L+EAYQF++ M ++    VW ALLG
Sbjct: 554 TEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLG 613

Query: 640 ACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           ACRVH N +LG+ V+  + +L P   GN+VL+SN+F+A+ ++ +  +VR+  +  G KK+
Sbjct: 614 ACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKS 673

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG SWIEI   +H+FI  D+SH++S EIY++L  I   + +  GY A T FVL +VEEEE
Sbjct: 674 PGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKL-GYRADTSFVLQDVEEEE 732

Query: 760 KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDAN 819
           K + L  HSE+LAIA+GVL  +E   I +TKNLRVC DCH+  K ++ +  R ++VRDAN
Sbjct: 733 KEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDAN 792

Query: 820 RFHHFEAGVCSCGDYW 835
           RFHHF+ G CSCGD+W
Sbjct: 793 RFHHFKNGQCSCGDFW 808



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 175/547 (31%), Positives = 282/547 (51%), Gaps = 14/547 (2%)

Query: 5   CGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCV 64
           CG +  A  LFD++    +  +NA++ AY   G  L +    S  R      + +TFP V
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           +KAC+ L DL     +H    + G  +  F+  +LV +YAKC  FR A  +F RM  + D
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR-D 194

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           VV WN++++ Y+  G+  + +     MQ      NA T VA L         + G  +HA
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHA 253

Query: 185 ATVKS----GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +V++         V V  AL+ MYA+CG +  A+ V   +  ++ V+W++++ GFV   
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313

Query: 241 LYCKAMQFFRELQGAG---QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
              +A   F+++   G     P  V +  A+ A   L +L  GK+LHA   K G  +DL 
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVAS--ALRACANLSDLCLGKQLHALLAKSGLHTDLT 371

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
            GN+L+ MYAK   ++    +F QM  +D +S++ +++GY QN    +A  +FR +Q   
Sbjct: 372 AGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACN 431

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +  DV  + S++ ACS L  +   K  HG +I +G+ S+  I NA++D+Y KCG ID SR
Sbjct: 432 VQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSR 491

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F+ + ++D+VSW +MI+ Y  +GL  EA  LF  M     E D +T +  +SA S   
Sbjct: 492 QIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSG 551

Query: 477 ILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSM 534
           ++ +GK     +  K G          +VD+ AR G LD A +    +  K D+ +W ++
Sbjct: 552 LVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGAL 611

Query: 535 INANGLH 541
           + A  +H
Sbjct: 612 LGACRVH 618



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 230/447 (51%), Gaps = 16/447 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC S   A  +F ++  R V  WNAML  Y  +G+    +     M+    + +A T
Sbjct: 173 VYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNAST 231

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK-CG-YDSTDFIV--NSLVAMYAKCYDFRKARQLF 116
              ++   A    L  G  +H   ++ C  +D  D ++   +L+ MYAKC     A ++F
Sbjct: 232 LVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVF 291

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVA-ALQACEDSSF 175
           + M  + +V  W++++  +   G+ LEA  LF++M   GL   + T VA AL+AC + S 
Sbjct: 292 EAMAVRNEVT-WSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSD 350

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             LG ++HA   KSG +  +   N+L++MYA+ G + +A  +  Q+  KD+VS++++++G
Sbjct: 351 LCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSG 410

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +VQN    +A + FR++Q    +PD    V+ + A   L  L +GK  H   I +G  S+
Sbjct: 411 YVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASE 470

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             I N L+DMYAKC  ++   ++F  M A+D +SW T+IAGY  +    +A  LF  ++ 
Sbjct: 471 TSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKH 530

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKE-----IHGYIIRKGLSDLVILNAIVDVYGKCG 410
           +  + D +    ++ ACS    +++ K       H Y I   +   +    +VD+  + G
Sbjct: 531 QACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYI---GMVDLLARGG 587

Query: 411 NIDYSRNVFESIESK-DVVSWTSMISS 436
            +D +    + +  K DV  W +++ +
Sbjct: 588 FLDEAYQFIQGMPLKADVRVWGALLGA 614


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 278/779 (35%), Positives = 451/779 (57%), Gaps = 77/779 (9%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+  V++ CA LK    G K+H ++          +   LV+ YA C D ++ R++FD M
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK++V LWN ++S Y+  G   E++ LF+ M   G+                       
Sbjct: 161 -EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE---------------------- 197

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY-QLENKDSVSWNSMLTGFVQ 238
                                        GK  E+A  L+ +L ++D +SWNSM++G+V 
Sbjct: 198 -----------------------------GKRPESAFELFDKLCDRDVISWNSMISGYVS 228

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N L  + +  ++++   G   D    ++ +      G L  GK +H+ AIK  F   +  
Sbjct: 229 NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF 288

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            NTL+DMY+KC  ++   RVF +M  ++ +SWT++IAGY ++     A++L + ++ EG+
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGV 348

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             DV+ I S+L AC+    +   K++H YI    + S+L + NA++D+Y KCG+++ + +
Sbjct: 349 KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANS 408

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF ++  KD++SW +MI                       ++ DS T+   L A +SLS 
Sbjct: 409 VFSTMVVKDIISWNTMI---------------------GELKPDSRTMACVLPACASLSA 447

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L++GKE++G+I+R G++ +  VA++LVD+Y +CG L +A  +F+ + +KDL+ WT MI  
Sbjct: 448 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAG 507

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G+HG G  AI  F +M      PD ++F+++LYACSHSGL+ +G +F  IM+ D+ ++P
Sbjct: 508 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEP 567

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHYAC+VDLL R  +L +AY+F+ ++ I P A +W ALL  CR + + EL E VA+++
Sbjct: 568 KLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERV 627

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA- 716
            EL+P N G YVL++N++A + KW++V+++R ++   GL+K PG SWIEI  K++ F++ 
Sbjct: 628 FELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSG 687

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            + SH  S  I   L ++  K++ EG +  +T++ L N +E +K   L GHSE+LA+A+G
Sbjct: 688 NNSSHPHSKNIESLLKKMRRKMKEEG-HFPKTKYALINADEMQKEMALCGHSEKLAMAFG 746

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +L       IR+TKNLRVC DCH   K +S+   RE+V+RD+NRFHHF+ G CSC  +W
Sbjct: 747 LLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 211/428 (49%), Gaps = 27/428 (6%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A +LFDK+  R V +WN+M+  YVSNG   R L  Y +M  LGI VD  T   V+  CA 
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
              L  G  +H L +K  ++      N+L+ MY+KC D   A ++F++MGE+ +VV W S
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER-NVVSWTS 322

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I+ Y+  G+   A+ L ++M++ G+  +     + L AC  S     G ++H     + 
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               ++V NAL+ MYA+CG M  A  V   +  KD +SWN+M+                 
Sbjct: 383 MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL-------------- 428

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
                  KPD       + A   L  L  GKE+H Y ++ G+ SD  + N L+D+Y KC 
Sbjct: 429 -------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            +     +F  + ++D +SWT +IAGY  +    +A+  F  ++  G++ D +   S+L 
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS---DLVILNAIVDVYGKCGNIDYSRNVFESIE-SKD 426
           ACS    + Q      YI++   +    L     +VD+  + GN+  +    E++  + D
Sbjct: 542 ACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPD 600

Query: 427 VVSWTSMI 434
              W +++
Sbjct: 601 ATIWGALL 608



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 154/333 (46%), Gaps = 30/333 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F+K+ +R V +W +M+  Y  +G     ++   +M   G+ +D   
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA    LD G  +H  +     +S  F+ N+L+ MYAKC     A  +F  M 
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D++ WN++I                       L  ++ T    L AC   S    G 
Sbjct: 415 VK-DIISWNTMIGE---------------------LKPDSRTMACVLPACASLSALERGK 452

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   +++G +   +VANAL+ +Y +CG +  A  +   + +KD VSW  M+ G+  + 
Sbjct: 453 EIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHG 512

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E++ AG +PD+V  ++ + A    G L  G     Y +K  F  + +   
Sbjct: 513 YGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPK--- 568

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
             ++ YA  C V+ + R      A +F+    I
Sbjct: 569 --LEHYA--CMVDLLSRTGNLSKAYEFMETLPI 597



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 3/150 (2%)

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
           ++  C  I  S     +I+ + V  + + I  +   G    A+EL  +  ++ +E+   T
Sbjct: 45  IFSSCIPIRISATPTRTIDHQ-VTDYNAKILHFCQLGDLENAMELICMCQKSELETK--T 101

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
             S L   + L     GK+++  I      ++G++   LV  YA CG L    +VF+ ++
Sbjct: 102 YGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTME 161

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            K++ LW  M++     G  K +I LF  M
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIM 191


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 274/798 (34%), Positives = 457/798 (57%), Gaps = 9/798 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G VL A ++F+++S R   +W AML  Y  NG     L  Y +M   G+    + 
Sbjct: 86  LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV 145

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +C   +    G  IH    K G+ S  F+ N+++ +Y +C  FR A ++F  M 
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V +N++IS ++  G    AL +F EMQ  GL  +  T  + L AC        G 
Sbjct: 206 HR-DTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGT 264

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+   K+G +    +  +L+ +Y +CG +  A  +    +  + V WN ML  F Q +
Sbjct: 265 QLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324

Query: 241 LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
              K+ + F ++Q AG +P+Q    C +   + +  +     G+++H+ ++K GF SD+ 
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL---GEQIHSLSVKTGFESDMY 381

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +   L+DMY+K   +    RV   +  +D +SWT++IAGY Q+ C   AL  F+ +Q  G
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           +  D + + S +  C+G+  M Q  +IH  I   G S D+ I NA+V++Y +CG I  + 
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           + FE IE KD ++W  ++S +  +GL  EAL++F  M+++ V+ +  T VSALSA+++L+
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            +K+GK+++  +I+ G + E  V ++L+ +Y +CG+ + A   F+ +  ++ + W ++I 
Sbjct: 562 EIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIIT 621

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           +   HGRG  A+DLF +M+ E   P+ +TF+ +L ACSH GL+ EG  + + M  +Y + 
Sbjct: 622 SCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIR 681

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P P+HYAC++D+ GRA  L+ A +F+  M I   A VW  LL AC+VH N E+GE  AK 
Sbjct: 682 PRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKH 741

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           LLEL+P +  +YVL+SN +A + KW + +QVR  MR  G++K PG SWIE+ N +H+F  
Sbjct: 742 LLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFV 801

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D+ H  +++IY  LA I +++ +  GY  +   + H+ E+E +      HSE+LA+ +G
Sbjct: 802 GDRLHPLAEQIYNFLAVINDRVAKV-GYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFG 860

Query: 777 VLKSTEGSLIRITKNLRV 794
           ++       +R+ KNLRV
Sbjct: 861 LMSLPPCMPLRVIKNLRV 878



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 169/630 (26%), Positives = 319/630 (50%), Gaps = 7/630 (1%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKAC-AMLKDLDC 76
           +++R   +    L  ++++ +P +VL  ++        +    F C ++AC    +    
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
             +IH   +  G      + N L+ +Y+K      AR++F+ +  +++V  W +++S Y+
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVS-WVAMLSGYA 119

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +G   EALGL+R+M R G+V   Y   + L +C  +     G  IHA   K G   +++
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V NA+I +Y RCG    A  V   + ++D+V++N++++G  Q      A++ F E+Q +G
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             PD V   + ++A   LG+L  G +LH+Y  K G  SD  +  +L+D+Y KC  V    
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            +F      + + W  ++  + Q N   K+ ELF  +Q  G+  +      +L  C+  +
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +   ++IH   ++ G  SD+ +   ++D+Y K G ++ +R V E ++ KDVVSWTSMI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            YV +    +AL  F  M +  +  D+I L SA+S  + ++ +++G +++  I   G++ 
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           + S+ ++LV++YARCG +  A   F  ++ KD I W  +++     G  + A+ +F +M+
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD 539

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANH 614
                 +  TF++ L A ++   I +GK+    +++  +  +   E    L+ L G+   
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFE--TEVGNALISLYGKCGS 597

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
            E+A      M  E     W  ++ +C  H
Sbjct: 598 FEDAKMEFSEMS-ERNEVSWNTIITSCSQH 626



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 161/610 (26%), Positives = 292/610 (47%), Gaps = 14/610 (2%)

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE-TLGMEIHAATVKSG 190
           ++ + A     + L LF +  R         F  AL+AC  +     +  EIHA  V  G
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
                 V N LI +Y++ G +  A  V  +L  +D+VSW +ML+G+ QN L  +A+  +R
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           ++  AG  P      + +S+  +      G+ +HA   K GF S++ +GN ++ +Y +C 
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCG 192

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
                 RVF  M  +D +++ T+I+G+AQ      ALE+F  +Q  GL  D + I S+L 
Sbjct: 193 SFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLA 252

Query: 371 ACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC+ L  + +  ++H Y+ + G+ SD ++  +++D+Y KCG+++ +  +F S +  +VV 
Sbjct: 253 ACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVL 312

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           W  M+ ++       ++ ELF  M  A +  +  T    L   +    +  G++++   +
Sbjct: 313 WNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           + GF  +  V+  L+DMY++ G L+ A +V   ++ KD++ WTSMI     H   K A+ 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDL 608
            F +M+     PD+I   + +  C+    + +G +    I    Y  D     +  LV+L
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD--VSIWNALVNL 490

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEV-WCALLGACRVHSNKELGEIVAKKLLELD-PGNPG 666
             R   + EA+      +IE   E+ W  L+      +   L E   K  + +D  G   
Sbjct: 491 YARCGRIREAFSSFE--EIEHKDEITWNGLVSG---FAQSGLHEEALKVFMRMDQSGVKH 545

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
           N     +  +AS    +++Q +     + + KT  S   E+GN + S   +  S  ++  
Sbjct: 546 NVFTFVSALSASANLAEIKQGKQIH--ARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603

Query: 727 IYKKLAEITE 736
            + +++E  E
Sbjct: 604 EFSEMSERNE 613


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/708 (37%), Positives = 425/708 (60%), Gaps = 4/708 (0%)

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I++Y  +    +A  ++  M+      + +   + L+AC       LG E+H   VK+G
Sbjct: 95  LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +  V+V NALI MY+  G +  A  +  ++ENKD VSW++M+  + ++ L  +A+   R
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV--SDLQIGNTLMDMYAK 308
           ++     KP ++  ++       L +L  GK +HAY ++ G    S + +   L+DMY K
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  + Y  RVF  ++    ISWT +IA Y   N   + + LF  +  EG+  + + + S+
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           +  C     +   K +H + +R G +  LV+  A +D+YGKCG++  +R+VF+S +SKD+
Sbjct: 335 VKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDL 394

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           + W++MISSY  N   +EA ++F  M    +  +  T+VS L   +    L+ GK ++ +
Sbjct: 395 MMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSY 454

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
           I ++G   +  + +S VDMYA CG +D A+++F     +D+ +W +MI+   +HG G+ A
Sbjct: 455 IDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAA 514

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           ++LF +MEA    P+ ITF+  L+ACSHSGL+ EGK+    M  ++   P  EHY C+VD
Sbjct: 515 LELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVD 574

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
           LLGRA  L+EA++ ++SM + P   V+ + L AC++H N +LGE  AK+ L L+P   G 
Sbjct: 575 LLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGY 634

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
            VL+SN++A++ +W DV  +R  M+  G+ K PG S IE+   +H FI  D+ H ++ ++
Sbjct: 635 NVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKV 694

Query: 728 YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIR 787
           Y+ + E+ EKLE + GY      VLHN+++E+KV  L  HSE+LA+AYG++ +  G  IR
Sbjct: 695 YEMIDEMREKLE-DAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIR 753

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           I KNLRVC DCH+  KL+S+++GRE++VRD NRFHHF+ G CSC DYW
Sbjct: 754 IVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 271/524 (51%), Gaps = 6/524 (1%)

Query: 29  MLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
           ++ +Y+ N  P    + Y+ MR     VD F  P V+KAC ++     G ++HG V+K G
Sbjct: 95  LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
           +    F+ N+L+ MY++      AR LFD++ E +DVV W+++I +Y  SG   EAL L 
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKI-ENKDVVSWSTMIRSYDRSGLLDEALDLL 213

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ--NLQVYVANALIAMYA 206
           R+M  + +  +    ++      + +   LG  +HA  +++G+     V +  ALI MY 
Sbjct: 214 RDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYV 273

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +C  +  A  V   L     +SW +M+  ++  +   + ++ F ++ G G  P+++  ++
Sbjct: 274 KCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLS 333

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            V   G  G L  GK LHA+ ++ GF   L +    +DMY KC  V     VF    ++D
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKD 393

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            + W+ +I+ YAQNNC  +A ++F  +   G+  +   + S+LM C+    +   K IH 
Sbjct: 394 LMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHS 453

Query: 387 YIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           YI ++G+  D+++  + VD+Y  CG+ID +  +F     +D+  W +MIS +  +G    
Sbjct: 454 YIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEA 513

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLV 504
           ALELF  M    V  + IT + AL A S   +L++GK L   ++ + GF  +      +V
Sbjct: 514 ALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMV 573

Query: 505 DMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA 547
           D+  R G LD A+++   +  + ++ ++ S + A  LH   K+ 
Sbjct: 574 DLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLG 617



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 220/435 (50%), Gaps = 9/435 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + GS+  A  LFDK+  + V +W+ M+ +Y  +G     L+    M V+ +      
Sbjct: 168 MYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIG 227

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVL---KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              +    A L DL  G  +H  V+   KCG      +  +L+ MY KC +   AR++FD
Sbjct: 228 MISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVP-LCTALIDMYVKCENLAYARRVFD 286

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            +  K  ++ W ++I+AY       E + LF +M   G+  N  T ++ ++ C  +    
Sbjct: 287 GL-SKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALE 345

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LG  +HA T+++G  L + +A A I MY +CG +  A  V    ++KD + W++M++ + 
Sbjct: 346 LGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYA 405

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN+   +A   F  + G G +P++   V+ +    + G+L  GK +H+Y  KQG   D+ 
Sbjct: 406 QNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMI 465

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +  + +DMYA C  ++   R+F + T +D   W  +I+G+A +     ALELF  ++  G
Sbjct: 466 LKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALG 525

Query: 358 LDA-DVMIIGSVLMACSGLKCMSQTKEI-HGYIIRKGLSDLV-ILNAIVDVYGKCGNIDY 414
           +   D+  IG+ L ACS    + + K + H  +   G +  V     +VD+ G+ G +D 
Sbjct: 526 VTPNDITFIGA-LHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDE 584

Query: 415 SRNVFESIESKDVVS 429
           +  + +S+  +  ++
Sbjct: 585 AHELIKSMPMRPNIA 599


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/658 (38%), Positives = 412/658 (62%), Gaps = 3/658 (0%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G+ +H   VK G   Q  V NALI+ YA+  ++ +A  V  ++  +D +SWNS++ G   
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N LY KA++ F  +   GQ+ D    ++ + A  +      G  +H Y+++ G +S+  +
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           GN L+DMY+ C       ++F  M  ++ +SWT +I  Y +     K   LF+ + LEG+
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRN 417
             DV  I S L A +G + +   K +HGY IR G+ + L + NA++++Y KCG ++ +R 
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F+ +  KD +SW ++I  Y  + LANEA  LF  M    +  +++T+   L AA+SLS 
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSS 301

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L++G+E++ + +R+G+  +  VA++LVDMY +CGAL +A ++F+ +  K+LI WT MI  
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G+HGRG+ AI LF +M+     PD  +F A+LYACSHSGL +EG +F   MR +++++P
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             +HYAC+VDLL    +L+EAY+F+ +M IEP + +W +LL  CR+H N +L E VA+ +
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMV 481

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
            EL+P N G YVL++N++A + +W+ V +++ ++ G GL++  G SWIE+  K H F A 
Sbjct: 482 FELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAE 541

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           +++H +   I + L ++  +++ E G+  + ++ L   ++    + L GHS +LA+A+GV
Sbjct: 542 NRNHPQGMRIAEFLDDVARRMQEE-GHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGV 600

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L  ++G  IR+TKN RVC  CH   K +S++ GRE+++RD+NRFHHFE G CSC  YW
Sbjct: 601 LNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 264/503 (52%), Gaps = 12/503 (2%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G  +HG ++K G+ +   + N+L++ YAK      A  +FD M ++ D++ WNSII   +
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQR-DIISWNSIIGGCA 61

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
           ++G   +A+ LF  M   G   ++ T ++ + AC  S +  +G  +H  +V++G   +  
Sbjct: 62  SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           + NAL+ MY+ C        +   +E K+ VSW +M+T + +   + K    F+E+   G
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            +PD     +A+ A     +L +GK +H YAI+ G    L + N LM+MY KC  +    
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            +F  +T +D ISW T+I GY+++N   +A  LF  + L+ L  + + +  +L A + L 
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLS 300

Query: 377 CMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            + + +E+H Y +R+G L D  + NA+VD+Y KCG +  +R +F+ + +K+++SWT MI+
Sbjct: 301 SLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIA 360

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  +G   +A+ LF  M  + ++ D+ +  + L A S   +  +G       +R    +
Sbjct: 361 GYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFN-AMRNEHRI 419

Query: 496 EGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA---ID 549
           E  +   + +VD+    G L  A +    +  + D  +W S++    +H   K+A    +
Sbjct: 420 EPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAE 479

Query: 550 LFYKMEAESFAPDHITFLALLYA 572
           + +++E E+    +   LA +YA
Sbjct: 480 MVFELEPEN--TGYYVLLANIYA 500



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 207/372 (55%), Gaps = 2/372 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K   + DA  +FD++ QR + +WN+++G   SNG   + +E + RM + G  +D+ T 
Sbjct: 29  YAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTL 88

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ AC        G  +HG  ++ G  S   + N+L+ MY+ C D+R   ++F  M E
Sbjct: 89  LSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNM-E 147

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           +++VV W ++I++Y+ +G   +  GLF+EM   G+  + +   +AL A   +     G  
Sbjct: 148 QKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKS 207

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +++G    + VANAL+ MY +CG M EA  +   +  KD++SWN+++ G+ +++L
Sbjct: 208 VHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNL 267

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A   F E+     +P+ V     + A+  L +L  G+E+HAYA+++G++ D  + N 
Sbjct: 268 ANEAFTLFNEML-LQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANA 326

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMY KC  +    R+F  +T ++ ISWT +IAGY  +     A+ LF  ++  G+  D
Sbjct: 327 LVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPD 386

Query: 362 VMIIGSVLMACS 373
                ++L ACS
Sbjct: 387 AGSFSAILYACS 398



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 161/308 (52%), Gaps = 2/308 (0%)

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
           ++G  +H Y +K GF +   + N L+  YAK   +     VF +M  +D ISW +II G 
Sbjct: 1   MDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC 60

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
           A N  + KA+ELF  + LEG + D   + SV+ AC           +HGY +R GL S+ 
Sbjct: 61  ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            + NA++D+Y  C +   +  +F ++E K+VVSWT+MI+SY   G  ++   LF  M   
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +  D   + SAL A +    LK GK ++G+ IR G      VA++L++MY +CG ++ A
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             +F+ V  KD I W ++I           A  LF +M  +   P+ +T   +L A +  
Sbjct: 241 RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASL 299

Query: 577 GLINEGKK 584
             +  G++
Sbjct: 300 SSLERGRE 307



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 129/260 (49%), Gaps = 2/260 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C       ++F  + Q+ V +W AM+ +Y   G   +V   +  M + GI  D F 
Sbjct: 129 MYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFA 188

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + A A  + L  G  +HG  ++ G +    + N+L+ MY KC    +AR +FD + 
Sbjct: 189 ITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHV- 247

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K+D + WN++I  YS S    EA  LF EM  + L  NA T    L A    S    G 
Sbjct: 248 TKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSSLERGR 306

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+HA  V+ G     +VANAL+ MY +CG +  A  +   L NK+ +SW  M+ G+  + 
Sbjct: 307 EMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHG 366

Query: 241 LYCKAMQFFRELQGAGQKPD 260
               A+  F +++G+G +PD
Sbjct: 367 RGRDAIALFEQMKGSGIQPD 386



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++L A +LFD ++ + + +W  M+  Y  +G     +  + +M+  GI  DA +
Sbjct: 330 MYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGS 389

Query: 61  FPCVIKACA 69
           F  ++ AC+
Sbjct: 390 FSAILYACS 398


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 282/836 (33%), Positives = 458/836 (54%), Gaps = 5/836 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFT 60
           Y + G    ++++FD   +   F W  ++  YV  G     +  Y  M       +  F 
Sbjct: 43  YAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFV 102

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V+KAC+   DL  G K+HG V+KCG++S   +  SL+ MY +      A + FD M 
Sbjct: 103 FPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMP 162

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV W+SI+  +  +GQ  E L +F +M    +  ++ T ++  +AC +     LG 
Sbjct: 163 IR-DVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGR 221

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   V+        + N+LI MY + G +  A  +   +  + +  W  M++ + Q+ 
Sbjct: 222 SVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSG 281

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ-IG 299
            + +A+  F ++Q    +P+QV  V  + A  RLG +  G+ +H + I++    +L  +G
Sbjct: 282 CFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLG 341

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             LM++YA    +    +VF  +  +  +SW T+I+ + +N    +AL LF  +Q +GL 
Sbjct: 342 PALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLM 401

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
            D   + S L AC  +       +IHGYII+ G  +  + NA++D+Y KCG +  +  +F
Sbjct: 402 PDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMF 461

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E I+ K +V+W SMI  +  NG + EA+ LF  M    V+ D +T +S + A S L  L+
Sbjct: 462 EKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLE 521

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           KGK ++  +I  G   +  + ++L DMY++CG L +A+ VF+ +  + ++ W+ MI   G
Sbjct: 522 KGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYG 581

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HG+    I LF +M      P+ ITF+ +L ACSH+G + EGK +   M  ++ ++P  
Sbjct: 582 MHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPKH 640

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           +H+AC+VDLL RA  L  AYQ + S+     + +W ALL  CR+H   ++ + + K LL+
Sbjct: 641 DHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLD 700

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           +D  + G Y L+SN++A    W    +VR  M+  GL+K PG S IEI  KI+ F   D 
Sbjct: 701 VDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDT 760

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SHS++ +IY+ L E    L     Y ++    +    +  K   +  HSE+LAIA+G++ 
Sbjct: 761 SHSQTKDIYRFL-ENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIIN 819

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +  G+ +RI+KNLRVC DCHSF K+ S++ GRE+++RD NRFH F  G CSC DYW
Sbjct: 820 TRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/580 (28%), Positives = 294/580 (50%), Gaps = 14/580 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYG+   + DA + FD +  R V  W++++  +V NG+    L+ +S+M    +  D+ T
Sbjct: 144 MYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVT 203

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V +AC+ L  L  G  +HG V++   +S   + NSL+ MY K  D   A +LF+ + 
Sbjct: 204 MLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVP 263

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +     W  +IS Y+ SG   EAL +F +MQ   +  N  T V  L AC        G 
Sbjct: 264 CRM-TAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGR 322

Query: 181 EIHAATVKSGQNLQV-YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +H   ++   + ++ ++  AL+ +YA  G + +   V   ++ K  +SWN++++ F +N
Sbjct: 323 SVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRN 382

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  F ++Q  G  PD     +++SA G +     G ++H Y IK G  +D  + 
Sbjct: 383 GQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQ 441

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+DMYAKC  V+   ++F ++  +  ++W ++I G++QN   ++A+ LF  + +  + 
Sbjct: 442 NALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVK 501

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D +   SV+ ACS L  + + K +H  +I  GL  D  +  A+ D+Y KCG +  +  V
Sbjct: 502 MDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGV 561

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  + +VSW+ MI+ Y  +G  N  + LF  M  + ++ + IT +  LSA S    +
Sbjct: 562 FDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAV 621

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINA 537
           ++GK     +   G   +    + +VD+ +R G L+ A ++   +    +  +W +++N 
Sbjct: 622 EEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNG 681

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPD-----HITFLALLYA 572
             +H R    ID+   +E      D     + T L+ +YA
Sbjct: 682 CRIHKR----IDIIKSIEKNLLDVDTADTGYYTLLSNIYA 717



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 211/404 (52%), Gaps = 8/404 (1%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
           ++   + C  S+  T   ++HA    +G +     +  LI  YA+ G    +  V     
Sbjct: 4   YMPLFRRCATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNG 280
             DS  W  ++  +V    + +A+  + E+  Q   Q  + V      + SG  G+L  G
Sbjct: 61  KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSG-FGDLSVG 119

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
            ++H   IK GF SD  +  +L+ MY +  C++   + F  M  +D ++W++I+  + QN
Sbjct: 120 GKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQN 179

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
               + L++F  +  E ++ D + + SV  ACS L  +   + +HGY++R+ + S+  + 
Sbjct: 180 GQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLN 239

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N+++ +YGK G++  +  +FE++  +    WT MIS Y  +G   EAL +F  M E  +E
Sbjct: 240 NSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKME 299

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE-GSVASSLVDMYARCGALDIANK 518
            + +T+V  L A + L  +K+G+ ++GF+IR+  + E   +  +L+++YA  G L   +K
Sbjct: 300 PNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHK 359

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           VF  ++ K ++ W ++I+    +G+ + A+ LF +M+ +   PD
Sbjct: 360 VFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPD 403



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 74/158 (46%), Gaps = 5/158 (3%)

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           +L+  +   G +     ++ L++ YA+ G  + + +VF+     D  +W  +I      G
Sbjct: 19  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78

Query: 543 RGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPE 600
             + A+ L+++M   +     +  F ++L ACS  G ++ G K    +++C ++ D   E
Sbjct: 79  FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
               L+ + G  + L++A +   +M I      W +++
Sbjct: 139 --TSLLCMYGEMSCLDDACKAFDTMPIRDVV-AWSSIV 173


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 286/843 (33%), Positives = 475/843 (56%), Gaps = 11/843 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC  V  AE++FD +  R V +W AML  Y  NG   + LE  SRM   G+  +  T
Sbjct: 102 MYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVT 161

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++  CA L+ LD G KIH  ++  G +    + N+LV MY  C  F   + +F RMG
Sbjct: 162 FVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMG 221

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +   V+LW ++I+  S +GQ  E L +FR+M   G+  N  T+++ ++ C +      G 
Sbjct: 222 QS-SVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGE 280

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            I A  ++S       +A +LI++Y +CG +  A G+L  +  +D V+WN+M+T   QN 
Sbjct: 281 MIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNG 340

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS-DLQIG 299
              +A+   R +   G   ++V  ++ + A   L  L  G+E+HA  +  G +  ++ +G
Sbjct: 341 DNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVG 400

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+++ MY KC        VF  M  +D +SW  +I     N+    ALELF  ++LEGL 
Sbjct: 401 NSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLR 460

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRN 417
           ++   + S+L AC GL+ +   ++IH      G   +   + N++V++Y +CG++  ++ 
Sbjct: 461 SNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKK 520

Query: 418 VFESIESKDVVSWTSMISSYVH--NGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
            F+S+E K +V+W+ ++++Y    +G    A + F  M    ++   +T VSAL A +++
Sbjct: 521 AFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAM 580

Query: 476 SILKKGKELNGFIIRKGFNLEGSV--ASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           + L+ G+ ++      GF +E S+   +++++MY +CG+   A  VF+ +  K LI W S
Sbjct: 581 ATLEHGRSMHRRAAASGF-VETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNS 639

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           +I A   +G    A+    +M  + F PD  T +++LY  SH+GL+  G +       D+
Sbjct: 640 LIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDH 699

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGEI 652
            L+P      CLVDLL R   L+ A + +  S   +     W  LL AC+ + + + G  
Sbjct: 700 GLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIR 759

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
            A+++ EL+P + G++V+++N++A+  +W D  ++R  M    +KK PG SWIE+   +H
Sbjct: 760 CAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVH 819

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLA 772
            FI+ +  H +  EI + L ++T ++ RE GYV  T  V+H+VEE +K ++L  HSERLA
Sbjct: 820 EFISGESKHPKIREICEDLEKLTLRM-REAGYVPDTTNVVHDVEEGDKEEILSRHSERLA 878

Query: 773 IAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           I +G++ +  G  IR+ KNLRVC DCH+  K++S + GRE+VVRD++RFHHF+ G CSCG
Sbjct: 879 IVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCG 938

Query: 833 DYW 835
           D+W
Sbjct: 939 DFW 941



 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 190/590 (32%), Positives = 308/590 (52%), Gaps = 6/590 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC  V DA  +FD +S + VF+W  M+ AY  NG     LE ++RM+  G   D   
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   + ACA   +LD G +IH  V+  G  S   I NSLV MY KC D   A ++FD M 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV W ++++ Y+ +G   +AL     M   G+  N  TFV  +  C       LG 
Sbjct: 121 LR-DVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +  G      + NAL+ MY  CG   +   V  ++     + W +M+ G  QN 
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            Y + +  FR++   G K ++V  ++ V     L  +  G+ + A  ++  F S   +  
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ +Y +C  ++    +   M  +D ++W  ++   AQN  + +A+ L R + +EG  A
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA 359

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNV 418
           + +   SVL AC+ L+ +SQ +EIH  ++  GL   ++ + N+++ +YGKCG  + + +V
Sbjct: 360 NKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSV 419

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           FE++  KD VSW ++I++ V N    +ALELF+ M    + S+  TL+S L A   L  L
Sbjct: 420 FEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDL 479

Query: 479 KKGKELNGFIIRKGFNLEGS-VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN- 536
           K  ++++      GF    + V +S+V+MYARCG+L  A K F+ ++ K L+ W+ ++  
Sbjct: 480 KLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAA 539

Query: 537 -ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
            A    G G+ A   F +MEAE   P  +TF++ L AC+    +  G+  
Sbjct: 540 YAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSM 589



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 185/342 (54%), Gaps = 11/342 (3%)

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           MY KC  V     VF  ++A++  SWT ++A Y+QN  + +ALELF  +Q EG   D ++
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
               L AC+    +   ++IH  ++  GL S+++I N++V++YGKC ++  +  VF+ + 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            +DVVSWT+M++ Y  NG  ++ALE    M+   V+ + +T V+ +   + L +L  G++
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++  II +G   +G + ++LV MY  CG+ D    VF+ +    ++LWT+MI     +G+
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK----KFLEIMRCDYQLDPWP 599
            +  + +F KM+ E    + +T+++++  C +   + EG+    + LE   C   L    
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA-- 298

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
                L+ L G+   L+ A   +  M  +     W A++ AC
Sbjct: 299 ---TSLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTAC 336


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 274/699 (39%), Positives = 420/699 (60%), Gaps = 15/699 (2%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M R  +  N YTF  AL+AC   +    G  IH   + +G    ++V+ AL+ MY +C  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK--PDQVCTVNAV 268
           + +AA +   +  +D V+WN+ML G+  + +Y  A+     +Q    +  P+    V  +
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 269 SASGRLGNLLNGKELHAYAI----------KQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
               + G L  G  +HAY I          K      + +G  L+DMYAKC  + Y  RV
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKC 377
           F  M A++ ++W+ +I G+   +   +A  LF+ +  +GL       I S L AC+ L  
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 378 MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           +   +++H  + + G+ +DL   N+++ +Y K G ID +  +F+ +  KD VS+++++S 
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           YV NG A EA  +F  M   NVE D+ T+VS + A S L+ L+ G+  +G +I +G   E
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
            S+ ++L+DMYA+CG +D++ +VFN + ++D++ W +MI   G+HG GK A  LF +M  
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
             F PD +TF+ LL ACSHSGL+ EGK +  +M   Y L P  EHY C+VDLL R   L+
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EAY+F++SM +     VW ALLGACRV+ N +LG+ V++ + EL P   GN+VL+SN+++
Sbjct: 481 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 540

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           A+ ++ +  +VR+  +  G KK+PG SWIEI   +H+F+  D+SH +S EIY++L  I  
Sbjct: 541 AAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILV 600

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
            +++  GY   T FVL ++EEEEK + L  HSE+LAIAYG+L  +E   I +TKNLRVC 
Sbjct: 601 GIKKL-GYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCG 659

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCH+  K +S +  R ++VRDANRFHHF+ G CSCGD+W
Sbjct: 660 DCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 155/503 (30%), Positives = 256/503 (50%), Gaps = 23/503 (4%)

Query: 54  ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           ++ + +TFP  +KAC+ L D  CG  IH   +  G  +  F+  +L+ MY KC     A 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALG--LFREMQRVGLVTNAYTFVAALQACE 171
            +F  M  + D+V WN++++ Y+  G    A+   L  +MQ   L  NA T VA L    
Sbjct: 66  HIFATMPAR-DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 124

Query: 172 DSSFETLGMEIHAATV----------KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
                  G  +HA  +          KS     V +  AL+ MYA+CG +  A  V   +
Sbjct: 125 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM 184

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG---QKPDQVCTVNAVSASGRLGNLL 278
             ++ V+W++++ GFV      +A   F+ +   G     P  +   +A+ A   L +L 
Sbjct: 185 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI--ASALRACASLDHLR 242

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
            G++LHA   K G  +DL  GN+L+ MYAK   ++    +F +M  +D +S++ +++GY 
Sbjct: 243 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 302

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLV 397
           QN    +A  +F+ +Q   ++ D   + S++ ACS L  +   +  HG +I +GL S+  
Sbjct: 303 QNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETS 362

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           I NA++D+Y KCG ID SR VF  + S+D+VSW +MI+ Y  +GL  EA  LF  MN   
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS--SLVDMYARCGALDI 515
              D +T +  LSA S   ++ +GK     ++  G+ L   +     +VD+ +R G LD 
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWF-HVMGHGYGLTPRMEHYICMVDLLSRGGFLDE 481

Query: 516 ANKVFNCVQTK-DLILWTSMINA 537
           A +    +  + D+ +W +++ A
Sbjct: 482 AYEFIQSMPLRADVRVWVALLGA 504



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 226/455 (49%), Gaps = 23/455 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY--SRMRVLGISVDA 58
           MY KC  + DA  +F  +  R +  WNAML  Y  +G     +      +M++  +  +A
Sbjct: 54  MYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNA 113

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLK-CGYDS-------TDFIV--NSLVAMYAKCYD 108
            T   ++   A    L  G  +H   ++ C + +       TD ++   +L+ MYAKC  
Sbjct: 114 STLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGS 173

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVA-AL 167
              AR++FD M  + +V  W+++I  +    +  +A  LF+ M   GL   + T +A AL
Sbjct: 174 LLYARRVFDAMPARNEVT-WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASAL 232

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           +AC       +G ++HA   KSG +  +   N+L++MYA+ G + +A  +  ++  KD+V
Sbjct: 233 RACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 292

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           S++++++G+VQN    +A   F+++Q    +PD    V+ + A   L  L +G+  H   
Sbjct: 293 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 352

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           I +G  S+  I N L+DMYAKC  ++   +VF  M ++D +SW T+IAGY  +    +A 
Sbjct: 353 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 412

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAI 402
            LF  +   G   D +    +L ACS    + + K       HGY +   +   + +   
Sbjct: 413 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICM--- 469

Query: 403 VDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           VD+  + G +D +    +S+  + DV  W +++ +
Sbjct: 470 VDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 299/830 (36%), Positives = 471/830 (56%), Gaps = 25/830 (3%)

Query: 22  TVFTWNAMLGAYVSNGEPLRVLETYSRMRVL--GISVDAFTFPCVIKACAMLKDLDCGAK 79
           ++  WN +L      G     L    R+     G++ D FT P  +K+C      D G +
Sbjct: 29  SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQ 84

Query: 80  IHGLVLKCGY-DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           +H +  K G  D   F+ NSLV+MY +C     A ++F+ M  + ++V WN++++A +  
Sbjct: 85  VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGR-NLVSWNALMAAVADP 143

Query: 139 GQCLEALGLFRE-MQRVG--LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
            + LE   LFR+ ++ +G     +  T V  L  C   ++   G  +H   VKSG +   
Sbjct: 144 RRGLE---LFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAP 200

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLE---NKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
            V+N L+ MYA+CG+M +A     +      ++ VSWN ML G+ +N     A    RE+
Sbjct: 201 RVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREM 260

Query: 253 Q--GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIGNTLMDMYAKC 309
           Q    G   D++  ++ +     L  L   +ELHA+ +++G  ++   + N L+  Y +C
Sbjct: 261 QMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRC 320

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSV 368
            C+ +  RVF  + ++   SW  +I  +AQN     A+ELFR +    G   D   IGS+
Sbjct: 321 GCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSL 380

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           L+AC  LK +   K  HG+I+R GL  D  I  +++ VY +CG    +R +F+++E KD 
Sbjct: 381 LLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDE 440

Query: 428 VSWTSMISSYVHNGLANEALELFYLMN--EANVESDSITLVSALSAASSLSILKKGKELN 485
           VSW +MI+ Y  NGL  E+L+LF  M   +       +   SAL A S L  ++ GKE++
Sbjct: 441 VSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMH 500

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
            F ++     +  ++SS++DMY++CG++D A   F+ ++ KD + WT MI    ++GRGK
Sbjct: 501 CFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGK 560

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A+ L+ KM  E   PD  T+L LL AC H+G++ +G  F + MR   +++   EHYAC+
Sbjct: 561 EAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACV 620

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           + +L RA    +A   +  M  EP A++  ++L AC +H   ELG+ VA KLLEL+P   
Sbjct: 621 IGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKA 680

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
            +YVL SN++A SR+W ++ +VR  +R +G+ K PG SWI+I  K++SF+A + S  E  
Sbjct: 681 EHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMH 740

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
           ++ K    + EK+ R  GY   T  +LH +EEEEKV+ L  HSE+ AIA+G+L++   + 
Sbjct: 741 KVRKMWYSLEEKI-RAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTK 799

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +R+ KN+R+C DCH+  KL+S++  RE+VVRD  RFHHF  G+CSCGDYW
Sbjct: 800 VRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 194/609 (31%), Positives = 313/609 (51%), Gaps = 28/609 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLG--ISVD 57
           MYG+CG V DAE++F+ ++ R + +WNA++ A     +P R LE +   +  LG   + D
Sbjct: 108 MYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA---DPRRGLELFRDCLEDLGGTAAPD 164

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF- 116
             T   V+  CA L   + G  +HGL +K G+D+   + N LV MYAKC +   A   F 
Sbjct: 165 EATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFL 224

Query: 117 -DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ--RVGLVTNAYTFVAALQACEDS 173
               G   +VV WN ++  Y+ +G+   A GL REMQ    G+  +  T ++ L  C   
Sbjct: 225 EAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGL 284

Query: 174 SFETLGMEIHAATVKSGQNLQV-YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
                  E+HA  V+ G +L    V NALIA Y RCG +  A  V   + +K   SWN++
Sbjct: 285 PELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNAL 344

Query: 233 LTGFVQNDLYCKAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           +    QN     A++ FRE+  A GQKPD     + + A G L +LL+GK  H + ++ G
Sbjct: 345 IGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNG 404

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
              D  I  +L+ +Y +C   +    +F  +  +D +SW T+IAGY+QN    ++L+LFR
Sbjct: 405 LEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFR 464

Query: 352 TVQLE--GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
            +Q +  G    ++   S L+ACS L  +   KE+H + ++  L  D  + ++I+D+Y K
Sbjct: 465 EMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSK 524

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           CG++D +R  F+ +++KD VSWT MI+ Y  NG   EA+ L+  M    +E D  T +  
Sbjct: 525 CGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGL 584

Query: 469 LSAASSLSILKKGKELNGFI-IRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCV-Q 524
           L A     +L+ G  L  F  +R    +E  +   + ++ M +R G    A  +   + +
Sbjct: 585 LMACGHAGMLEDG--LCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPE 642

Query: 525 TKDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
             D  + +S+++A  +HG    GK   D    +E E    +H    + +YA S     +E
Sbjct: 643 EPDAKILSSVLSACHMHGEVELGKKVADKL--LELEPHKAEHYVLASNMYAGSRQ--WDE 698

Query: 582 GKKFLEIMR 590
            +K  +++R
Sbjct: 699 MRKVRKMLR 707


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 295/837 (35%), Positives = 470/837 (56%), Gaps = 4/837 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YG  G   DA ++F ++  + V +W A++ AYV  GEP  V+  Y RMR  G+S +  T
Sbjct: 74  LYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNT 133

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI  C  L++   G ++ G V+K G ++   + NSL++M+       +A  +F  M 
Sbjct: 134 MSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMD 193

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  D + WNS+I+AY  +G C E+L  F  M RV    N+ T    L  C        G 
Sbjct: 194 E-HDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGR 252

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH+  +K G N  V  +N LI MY+  G+  +A  V   +  KD +SWNSM+  + Q+ 
Sbjct: 253 GIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDG 312

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++    +    +  + V   +A++A         GK LHA  I  G   ++ +GN
Sbjct: 313 NCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGN 372

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ +YAK   +    +VF  M  +D ++W  +I G+A +    +AL+ F+ ++ EG+  
Sbjct: 373 ALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPI 432

Query: 361 DVMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
           + + I +VL AC +    +     IH +II  G  SD  + N+++ +Y KCG+++ S N+
Sbjct: 433 NYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNI 492

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ + SK+  +W +M+++  H+G   EAL+    M  A V  D  +    L+AA+ L+IL
Sbjct: 493 FDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAIL 552

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           ++G++L+G  ++ G +    VAS+ +DMY +CG +D   ++      +  + W  + ++ 
Sbjct: 553 EEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSF 612

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             HG  + A + F++M      PDH+TF++LL ACSH G++ EG  + + M  ++ +   
Sbjct: 613 SRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAK 672

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
             H  C++DLLGR+    EA  F++ M + PT  VW +LL AC+ H N ELG    + LL
Sbjct: 673 IGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLL 732

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           +LDP +   YVL SN+ A + KW+DVE++R +M  + +KK P  SW+++ NK+  F   D
Sbjct: 733 KLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGD 792

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            SH ++ EIY KL E+ +K+ +E GY+    + L + +EE+K   L+ HSERLA+AYG++
Sbjct: 793 HSHPQASEIYAKLEEL-KKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLI 851

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            S EGS ++I KNLRVC DCHS  K  S + GR++V+RD  RFH F  G CSC DYW
Sbjct: 852 SSPEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 165/599 (27%), Positives = 301/599 (50%), Gaps = 11/599 (1%)

Query: 30  LGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA----MLKDLDCGAKIHGLVL 85
           +  +V  G     +  ++ MR  G+         ++ AC     ML +   G ++HG ++
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIE---GVQVHGFIV 57

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
           K G  S  F+  SLV +Y        A ++F  M  K +VV W +++ AY   G+    +
Sbjct: 58  KVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYK-NVVSWTALMVAYVDYGEPSMVM 116

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
            ++R M+  G+  N  T  + +  C     E LG ++    +K G    V VAN+LI+M+
Sbjct: 117 NIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMF 176

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
              G + EA  V   ++  D++SWNSM+  +++N L  ++++ F  +    ++ +     
Sbjct: 177 GYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLS 236

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
             ++  G + NL  G+ +H+  +K G+ S++   NTL+ MY+          VF  M  +
Sbjct: 237 TMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEK 296

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           D ISW +++A YAQ+   L AL+L  T+      A+ +   S L ACS  +  ++ K +H
Sbjct: 297 DMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILH 356

Query: 386 GYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
             +I  GL + VI+ NA+V +Y K G +  ++ VF+++  +D V+W ++I  +  +   +
Sbjct: 357 ALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPD 416

Query: 445 EALELFYLMNEANVESDSITLVSALSAA-SSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
           EAL+ F LM E  V  + IT+ + L A  +   +L+ G  ++ FII  GF  +  V +SL
Sbjct: 417 EALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSL 476

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           + MYA+CG L+ +N +F+ + +K+   W +M+ AN  HG  + A+    +M       D 
Sbjct: 477 ITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDE 536

Query: 564 ITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV 622
            +F   L A +   ++ EG++ L  +      D  P   +  +D+ G+   +++  + +
Sbjct: 537 FSFSECLAAAAKLAILEEGQQ-LHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRII 594


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/692 (38%), Positives = 413/692 (59%), Gaps = 39/692 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +++ Q+L    A+ +I++Y     + EA  +   L++   ++W S++  F    
Sbjct: 26  QLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQS 84

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L+ KA+  F E++ +G+ PD     + + +   + +L  G+ +H + ++ G   DL  GN
Sbjct: 85  LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144

Query: 301 TLMDMYAKC-------------------------------CCVNYMG-----RVFYQMTA 324
            LM+MYAK                                 C+   G     RVF  M  
Sbjct: 145 ALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR 204

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D +S+ TIIAGYAQ+  +  AL + R +    L  D   + SVL   S    + + KEI
Sbjct: 205 KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264

Query: 385 HGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           HGY+IRKG+ SD+ I +++VD+Y K   I+ S  VF  +  +D +SW S+++ YV NG  
Sbjct: 265 HGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRY 324

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
           NEAL LF  M  A V+  ++   S + A + L+ L  GK+L+G+++R GF     +AS+L
Sbjct: 325 NEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASAL 384

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           VDMY++CG +  A K+F+ +   D + WT++I  + LHG G  A+ LF +M+ +   P+ 
Sbjct: 385 VDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQ 444

Query: 564 ITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
           + F+A+L ACSH GL++E   +   M   Y L+   EHYA + DLLGRA  LEEAY F+ 
Sbjct: 445 VAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFIS 504

Query: 624 SMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKD 683
            M +EPT  VW  LL +C VH N EL E VA+K+  +D  N G YVL+ N++A++ +WK+
Sbjct: 505 KMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKE 564

Query: 684 VEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGG 743
           + ++R+RMR  GL+K P  SWIE+ NK H F++ D+SH   D+I + L  + E++E+E G
Sbjct: 565 MAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKE-G 623

Query: 744 YVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
           YVA T  VLH+V+EE K ++L+GHSERLA+A+G++ +  G+ IR+TKN+R+C DCH   K
Sbjct: 624 YVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIK 683

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +S++  RE++VRD +RFHHF  G CSCGDYW
Sbjct: 684 FISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 228/457 (49%), Gaps = 41/457 (8%)

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           V+ W S+I  ++      +AL  F EM+  G   +   F + L++C        G  +H 
Sbjct: 70  VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKM----------------TEAAG------------ 216
             V+ G +  +Y  NAL+ MYA+   M                T  +G            
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189

Query: 217 --------VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
                   V   +  KD VS+N+++ G+ Q+ +Y  A++  RE+     KPD     + +
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
                  +++ GKE+H Y I++G  SD+ IG++L+DMYAK   +    RVF ++  +D I
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           SW +++AGY QN  + +AL LFR +    +    +   SV+ AC+ L  +   K++HGY+
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369

Query: 389 IRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           +R G  S++ I +A+VD+Y KCGNI  +R +F+ +   D VSWT++I  +  +G  +EA+
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDM 506
            LF  M    V+ + +  V+ L+A S + ++ +     N      G N E    +++ D+
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489

Query: 507 YARCGALDIANKVFN--CVQTKDLILWTSMINANGLH 541
             R G L+ A    +  CV+    + W++++++  +H
Sbjct: 490 LGRAGKLEEAYNFISKMCVEPTGSV-WSTLLSSCSVH 525



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 239/492 (48%), Gaps = 55/492 (11%)

Query: 15  FDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDL 74
           F  +    V  W +++  +       + L ++  MR  G   D   FP V+K+C M+ DL
Sbjct: 62  FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121

Query: 75  DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC---------------------------- 106
             G  +HG +++ G D   +  N+L+ MYAK                             
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181

Query: 107 --------YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
                   +     R++F+ M  K DVV +N+II+ Y+ SG   +AL + REM    L  
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRK-DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           +++T  + L    +      G EIH   ++ G +  VY+ ++L+ MYA+  ++ ++  V 
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
            +L  +D +SWNS++ G+VQN  Y +A++ FR++  A  KP  V   + + A   L  L 
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
            GK+LH Y ++ GF S++ I + L+DMY+KC  +    ++F +M   D +SWT II G+A
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
            +    +A+ LF  ++ +G+  + +   +VL ACS +  +    E  GY     ++ +  
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD---EAWGYF--NSMTKVYG 475

Query: 399 LN-------AIVDVYGKCGNIDYSRNVFES--IESKDVVSWTSMISS-YVHNG--LANEA 446
           LN       A+ D+ G+ G ++ + N      +E    V W++++SS  VH    LA + 
Sbjct: 476 LNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV-WSTLLSSCSVHKNLELAEKV 534

Query: 447 LELFYLMNEANV 458
            E  + ++  N+
Sbjct: 535 AEKIFTVDSENM 546



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 190/396 (47%), Gaps = 28/396 (7%)

Query: 12  EQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML 71
            ++F+ + ++ V ++N ++  Y  +G     L     M    +  D+FT   V+   +  
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
            D+  G +IHG V++ G DS  +I +SLV MYAK      + ++F R+  + D + WNS+
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR-DGISWNSL 314

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           ++ Y  +G+  EAL LFR+M    +   A  F + + AC   +   LG ++H   ++ G 
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
              +++A+AL+ MY++CG +  A  +  ++   D VSW +++ G   +    +A+  F E
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           ++  G KP+QV  V  ++A   +G +    E   Y      V  L   N  ++ YA    
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLV---DEAWGYFNSMTKVYGL---NQELEHYA--AV 486

Query: 312 VNYMGRVFYQMTAQDFIS----------WTTIIAGYAQNNCHL-KALELFRTVQLEGLDA 360
            + +GR      A +FIS          W+T+++     +C + K LEL   V  +    
Sbjct: 487 ADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS-----SCSVHKNLELAEKVAEKIFTV 541

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIR---KGL 393
           D   +G+ ++ C+      + KE+    +R   KGL
Sbjct: 542 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 127/238 (53%), Gaps = 7/238 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   + D+E++F ++  R   +WN+++  YV NG     L  + +M    +   A  
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VI ACA L  L  G ++HG VL+ G+ S  FI ++LV MY+KC + + AR++FDRM 
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF--ETL 178
             ++V  W +II  ++  G   EA+ LF EM+R G+  N   FVA L AC       E  
Sbjct: 406 VLDEVS-WTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL--ENKDSVSWNSMLT 234
           G   ++ T   G N ++    A+  +  R GK+ EA   + ++  E   SV W+++L+
Sbjct: 465 GY-FNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV-WSTLLS 520



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/292 (19%), Positives = 124/292 (42%), Gaps = 39/292 (13%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           +I +++   + +K  SQ K++H   IR         + ++ +Y     +  +  +F++++
Sbjct: 7   LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLK 66

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
           S  V++W S+I  +    L ++AL  F  M  +    D     S L + + +  L+ G+ 
Sbjct: 67  SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARC--------------------------------- 510
           ++GFI+R G + +    ++L++MYA+                                  
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186

Query: 511 ---GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
                +D   +VF  +  KD++ + ++I      G  + A+ +  +M      PD  T  
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246

Query: 568 ALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
           ++L   S    + +GK+    ++R     D +    + LVD+  ++  +E++
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIG--SSLVDMYAKSARIEDS 296


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/676 (38%), Positives = 421/676 (62%), Gaps = 4/676 (0%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           TF + L+ C   +    G  +HA     G + +   A AL  MYA+C +  +A  V  ++
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNG 280
             +D V+WN+++ G+ +N L   A+     +Q   G++PD V  V+ + A      L   
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           +E+HA+A++ GF   + +   ++D+Y KC  V+   +VF  M  ++ +SW  +I GYA+N
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
               +AL LF+ +  EG+D   + + + L AC  L  + + + +H  ++R GL S++ ++
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           NA++ +Y KC   D +  VF+ +  K  VSW +MI     NG + +A+ LF  M   NV+
Sbjct: 467 NALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVK 526

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            DS TLVS + A + +S   + + ++G+ IR   + +  V ++L+DMYA+CG + IA  +
Sbjct: 527 PDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSL 586

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           FN  + + +I W +MI+  G HG GKVA++LF +M++    P+  TFL++L ACSH+GL+
Sbjct: 587 FNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLV 646

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
           +EG+++   M+ DY L+P  EHY  +VDLLGRA  L EA+ F++ M +EP   V+ A+LG
Sbjct: 647 DEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLG 706

Query: 640 ACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           AC++H N EL E  A+++ EL+P     +VL++N++A +  WKDV +VR  M   GL+KT
Sbjct: 707 ACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKT 766

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG S +++ N+IH+F +   +H ++ +IY +LA++ E++ +  GYV  T  + H+VE++ 
Sbjct: 767 PGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEI-KAVGYVPDTDSI-HDVEDDV 824

Query: 760 KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDAN 819
           K Q+L  HSE+LAIAYG++++  G+ I+I KNLRVC DCH+  KL+S + GRE+++RD  
Sbjct: 825 KAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQ 884

Query: 820 RFHHFEAGVCSCGDYW 835
           RFHHF+ G CSCGDYW
Sbjct: 885 RFHHFKDGKCSCGDYW 900



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 254/487 (52%), Gaps = 7/487 (1%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  ++K CA   DL  G  +H  +   G         +L  MYAKC     AR++FDRM
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETL 178
             + D V WN++++ Y+ +G    A+G+   MQ   G   +A T V+ L AC D+     
Sbjct: 287 PAR-DRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGA 345

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
             E+HA  V+ G + QV V+ A++ +Y +CG +  A  V   +++++SVSWN+M+ G+ +
Sbjct: 346 CREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAE 405

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N    +A+  F+ + G G     V  + A+ A G LG L  G+ +H   ++ G  S++ +
Sbjct: 406 NGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNV 465

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+ MY KC   +   +VF ++  +  +SW  +I G  QN     A+ LF  +QLE +
Sbjct: 466 MNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENV 525

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D   + S++ A + +    Q + IHGY IR  L  D+ +L A++D+Y KCG +  +R+
Sbjct: 526 KPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARS 585

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F S   + V++W +MI  Y  +G    A+ELF  M  +    +  T +S LSA S   +
Sbjct: 586 LFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGL 645

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSM 534
           + +G+E     +++ + LE  +    ++VD+  R G L  A      +  +  I ++ +M
Sbjct: 646 VDEGQEYFSS-MKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAM 704

Query: 535 INANGLH 541
           + A  LH
Sbjct: 705 LGACKLH 711



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 202/420 (48%), Gaps = 14/420 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           MY KC    DA ++FD++  R    WNA++  Y  NG     +    RM+   G   DA 
Sbjct: 269 MYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAV 328

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V+ ACA  + L    ++H   ++ G+D    +  +++ +Y KC     AR++FD M
Sbjct: 329 TLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGM 388

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            ++  V  WN++I  Y+ +G   EAL LF+ M   G+     + +AAL AC +  F   G
Sbjct: 389 QDRNSVS-WNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEG 447

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   V+ G    V V NALI MY +C +   AA V  +L  K  VSWN+M+ G  QN
Sbjct: 448 RRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQN 507

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A++ F  +Q    KPD    V+ + A   + + L  + +H Y+I+     D+ + 
Sbjct: 508 GSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVL 567

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+DMYAKC  V+    +F     +  I+W  +I GY  +     A+ELF  ++  G  
Sbjct: 568 TALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKV 627

Query: 360 ADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
            +     SVL ACS       G +  S  KE +G  +  G+        +VD+ G+ G +
Sbjct: 628 PNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYG--LEPGMEH---YGTMVDLLGRAGKL 682


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/673 (39%), Positives = 408/673 (60%), Gaps = 5/673 (0%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANA-LIAMYARCGKMTEAAGVLYQLENKD 225
           LQAC       +G  +H     S Q    +V N  +I MY+ CG  +++  V  +L  K+
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 171

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELH 284
              WN++++ + +N+L+  AM  F EL    + KPD       + A   L +L  G+ +H
Sbjct: 172 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 231

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVN-YMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
             A K   VSD+ +GN L+ MY KC  V   + RVF  M  +   SW  ++ GYAQN+  
Sbjct: 232 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDP 291

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAI 402
            KAL+L+  +   GLD D   IGS+L+ACS +K +   +EIHG+ +R GL+ D  I  ++
Sbjct: 292 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISL 351

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           + +Y  CG    ++ +F+ +E + +VSW  MI+ Y  NGL +EA+ LF  M    ++   
Sbjct: 352 LSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE 411

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
           I ++    A S LS L+ GKEL+ F ++     +  V+SS++DMYA+ G + ++ ++F+ 
Sbjct: 412 IAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDR 471

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           ++ KD+  W  +I   G+HGRGK A++LF KM      PD  TF  +L ACSH+GL+ +G
Sbjct: 472 LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDG 531

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
            ++   M   + ++P  EHY C+VD+LGRA  +++A + +  M  +P + +W +LL +CR
Sbjct: 532 LEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCR 591

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
           +H N  LGE VA KLLEL+P  P NYVLISN+FA S KW DV +VR RM+  GL+K  G 
Sbjct: 592 IHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGC 651

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQ 762
           SWIE+G K+H+F+  D+   E +E+ +    +  K+    GY   T  VLH++EEE+K+ 
Sbjct: 652 SWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKIS-SIGYTPDTGSVLHDLEEEDKIG 710

Query: 763 MLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFH 822
           +L GHSE+LAI++G+L + +G  +R+ KNLR+C DCH+  K +S++  R++VVRD  RFH
Sbjct: 711 ILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFH 770

Query: 823 HFEAGVCSCGDYW 835
           HF  G+CSCGDYW
Sbjct: 771 HFRDGICSCGDYW 783



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 155/466 (33%), Positives = 242/466 (51%), Gaps = 23/466 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MY  CGS  D+  +FDK+ ++ +F WNA++ AY  N      +  +S +  V     D F
Sbjct: 150 MYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNF 209

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA-RQLFDR 118
           T PCVIKACA L DL  G  IHG+  K    S  F+ N+L+AMY KC    +A +++FD 
Sbjct: 210 TLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDL 269

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K  V  WN+++  Y+ +    +AL L+ +M   GL  + +T  + L AC        
Sbjct: 270 MDTKT-VSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHY 328

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G EIH   +++G  +  ++  +L+++Y  CGK   A  +   +E++  VSWN M+ G+ Q
Sbjct: 329 GEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQ 388

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N L  +A+  FR++   G +P ++  +    A  +L  L  GKELH +A+K     D+ +
Sbjct: 389 NGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFV 448

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            ++++DMYAK  C+    R+F ++  +D  SW  IIAGY  +    +ALELF  +   GL
Sbjct: 449 SSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGL 508

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             D      +LMACS       GL+  +Q   +H    +     L     +VD+ G+ G 
Sbjct: 509 KPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPK-----LEHYTCVVDMLGRAGR 563

Query: 412 IDYSRNVFESIE-SKDVVSWTSMISS-YVHNGL------ANEALEL 449
           ID +  + E +    D   W+S++SS  +H  L      AN+ LEL
Sbjct: 564 IDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLEL 609



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/545 (29%), Positives = 285/545 (52%), Gaps = 27/545 (4%)

Query: 42  VLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-LV 100
           VL++  R   +G+         +++AC   KD++ G ++H +V        DF++N+ ++
Sbjct: 98  VLDSAQRSEAMGV---------LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRII 148

Query: 101 AMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG-LVTN 159
            MY+ C     +R +FD++  ++++  WN+I+SAY+ +    +A+ +F E+  V     +
Sbjct: 149 TMYSMCGSPSDSRMVFDKL-RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPD 207

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
            +T    ++AC       LG  IH    K      V+V NALIAMY +CG + EA   ++
Sbjct: 208 NFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVF 267

Query: 220 QLENKDSV-SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
            L +  +V SWN++L G+ QN    KA+  + ++  +G  PD     + + A  R+ +L 
Sbjct: 268 DLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLH 327

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ-MTAQDFISWTTIIAGY 337
            G+E+H +A++ G   D  IG +L+ +Y  CC   +  +V +  M  +  +SW  +IAGY
Sbjct: 328 YGEEIHGFALRNGLAVDPFIGISLLSLYI-CCGKPFAAQVLFDGMEHRSLVSWNVMIAGY 386

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
           +QN    +A+ LFR +  +G+    + I  V  ACS L  +   KE+H + ++  L+ D+
Sbjct: 387 SQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDI 446

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            + ++I+D+Y K G I  S+ +F+ +  KDV SW  +I+ Y  +G   EALELF  M   
Sbjct: 447 FVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRL 506

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALD 514
            ++ D  T    L A S   +++ G E    ++    N+E  +   + +VDM  R G +D
Sbjct: 507 GLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNL-HNIEPKLEHYTCVVDMLGRAGRID 565

Query: 515 IANKVFNCVQ-TKDLILWTSMINANGLHGR----GKVAIDLFYKMEAESFAPDHITFLAL 569
            A ++   +    D  +W+S++++  +HG      KVA  L   +E E   P++   ++ 
Sbjct: 566 DALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKL---LELEPEKPENYVLISN 622

Query: 570 LYACS 574
           L+A S
Sbjct: 623 LFAGS 627


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 269/742 (36%), Positives = 431/742 (58%), Gaps = 4/742 (0%)

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            N +++ Y K  +  +AR+LFD M E+   V W  +I  YS   Q  EA  LF +MQR G
Sbjct: 86  TNMMISGYVKSGNLGEARKLFDGMVERT-AVTWTILIGGYSQLNQFKEAFELFVQMQRCG 144

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
              +  TFV  L  C          ++    +K G + ++ V N L+  Y +  ++  A 
Sbjct: 145 TEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLAC 204

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            +  ++   DSVS+N+M+TG+ ++ L  KA+  F E+Q +G KP +      + A+  L 
Sbjct: 205 QLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLD 264

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +++ G+++H++ IK  FV ++ + N L+D Y+K   V    ++F +M  QD +S+  II+
Sbjct: 265 DIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIIS 324

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY-IIRKGLS 394
           GYA +  H  A +LFR +Q    D       ++L   S        ++IH   I+    S
Sbjct: 325 GYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADS 384

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           ++++ N++VD+Y KCG  + +  +F ++  +  V WT+MIS+YV  G   E L+LF  M 
Sbjct: 385 EILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR 444

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
           +A+V +D  T  S L A++S++ L  GK+L+ FII+ GF       S+L+D+YA+CG++ 
Sbjct: 445 QASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIK 504

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A + F  +  ++++ W +MI+A   +G  +  +  F +M      PD ++FL +L ACS
Sbjct: 505 DAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACS 564

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           HSGL+ EG      M   Y+LDP  EHYA +VD+L R+    EA + +  M I+P   +W
Sbjct: 565 HSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMW 624

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDP-GNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
            ++L ACR+H N+EL    A +L  ++   +   YV +SN++AA+ +W++V +V   MR 
Sbjct: 625 SSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRD 684

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            G+KK P  SW+EI ++ H F A D+ H + +EI KK+  +T+ +E E GY   T   LH
Sbjct: 685 RGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTME-ELGYKPDTSCALH 743

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           N +E+ KV+ L  HSERLAIA+ ++ + EGS I + KNLR C+DCH+  K++S++ GRE+
Sbjct: 744 NEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREI 803

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
            VRD+ RFHHF  G CSCGD+W
Sbjct: 804 TVRDSTRFHHFRDGFCSCGDFW 825



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 166/560 (29%), Positives = 287/560 (51%), Gaps = 7/560 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G++ +A +LFD + +RT  TW  ++G Y    +     E + +M+  G   D  TF
Sbjct: 93  YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++  C   +  +   ++   ++K GYDS   + N+LV  Y K      A QLF  M E
Sbjct: 153 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE 212

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D V +N++I+ YS  G   +A+ LF EMQ  GL    +TF A L A        LG +
Sbjct: 213 I-DSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQ 271

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH+  +K+     V+V+NAL+  Y++   + +A  +  ++  +D VS+N +++G+  +  
Sbjct: 272 IHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGK 331

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           +  A   FRELQ       Q      +S +    +   G+++HA  I     S++ +GN+
Sbjct: 332 HKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNS 391

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC        +F  +T +  + WT +I+ Y Q   + + L+LF  ++   + AD
Sbjct: 392 LVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIAD 451

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFE 420
                S+L A + +  +S  K++H +II+ G +S++   +A++DVY KCG+I  +   F+
Sbjct: 452 QATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQ 511

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  +++VSW +MIS+Y  NG A   L+ F  M  + ++ DS++ +  LSA S   ++++
Sbjct: 512 EMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEE 571

Query: 481 GK-ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMINAN 538
           G    N        +      +S+VDM  R G  + A K+   +    D I+W+S++NA 
Sbjct: 572 GLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNAC 631

Query: 539 GLHGR---GKVAIDLFYKME 555
            +H      + A D  + ME
Sbjct: 632 RIHKNQELARRAADQLFNME 651



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 255/518 (49%), Gaps = 41/518 (7%)

Query: 13  QLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           QLF ++ +    ++NAM+  Y  +G   + +  +  M+  G+    FTF  V+ A   L 
Sbjct: 205 QLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLD 264

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D+  G +IH  V+K  +    F+ N+L+  Y+K      AR+LFD M E +D V +N II
Sbjct: 265 DIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPE-QDGVSYNVII 323

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           S Y+  G+   A  LFRE+Q        + F   L    ++    +G +IHA T+ +  +
Sbjct: 324 SGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTAD 383

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
            ++ V N+L+ MYA+CGK  EA  +   L ++ +V W +M++ +VQ   Y + +Q F ++
Sbjct: 384 SEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKM 443

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           + A    DQ    + + AS  + +L  GK+LH++ IK GF+S++  G+ L+D+YAKC  +
Sbjct: 444 RQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSI 503

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
               + F +M  ++ +SW  +I+ YAQN      L+ F+ + L GL  D +    VL AC
Sbjct: 504 KDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSAC 563

Query: 373 SGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
           S           H  ++ +GL      N++  +Y     +D  R  + S+          
Sbjct: 564 S-----------HSGLVEEGLWH---FNSMTQIY----KLDPRREHYASV---------- 595

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
            +     +G  NEA +   LM E  ++ D I   S L+A      + K +EL      + 
Sbjct: 596 -VDMLCRSGRFNEAEK---LMAEMPIDPDEIMWSSVLNACR----IHKNQELARRAADQL 647

Query: 493 FNLE----GSVASSLVDMYARCGALDIANKVFNCVQTK 526
           FN+E     +   ++ ++YA  G  +  +KV   ++ +
Sbjct: 648 FNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDR 685



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 126/237 (53%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG   +AE +F  ++ R+   W AM+ AYV  G     L+ +++MR   +  D  T
Sbjct: 395 MYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQAT 454

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +++A A +  L  G ++H  ++K G+ S  F  ++L+ +YAKC   + A Q F  M 
Sbjct: 455 FASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP 514

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ ++V WN++ISAY+ +G+    L  F+EM   GL  ++ +F+  L AC  S     G+
Sbjct: 515 DR-NIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGL 573

Query: 181 -EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
              ++ T     + +     +++ M  R G+  EA  ++ ++  + D + W+S+L  
Sbjct: 574 WHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 630



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 5/201 (2%)

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
           +SQ +++   +  K   + V  N ++  Y K GN+  +R +F+ +  +  V+WT +I  Y
Sbjct: 68  LSQARQLFEKMPHK---NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGY 124

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
                  EA ELF  M     E D +T V+ LS  +   +  +  ++   II+ G++   
Sbjct: 125 SQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRL 184

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            V ++LVD Y +   LD+A ++F  +   D + + +MI      G  + A++LF +M+  
Sbjct: 185 IVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNS 244

Query: 558 SFAPDHITFLALLYACSHSGL 578
              P   TF A+L  C++ GL
Sbjct: 245 GLKPTEFTFAAVL--CANIGL 263


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 279/720 (38%), Positives = 426/720 (59%), Gaps = 9/720 (1%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRV----GLVTNAYTFVAALQACEDSSFETLG 179
           + V WNS+I  +S +G   E+  L  EM         + +  T V  L  C       LG
Sbjct: 2   NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   VK   + ++ + NAL+ MY++CG +T A  +     NK+ VSWN+M+ GF   
Sbjct: 62  KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 121

Query: 240 DLYCKAMQFFRELQGAGQ--KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
                     R++   G+  K D+V  +NAV        L + KELH Y++KQ FV +  
Sbjct: 122 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 181

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N  +  YAKC  ++Y  RVF+ + ++   SW  +I G+AQ+N    +L+    +++ G
Sbjct: 182 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG 241

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           L  D   + S+L ACS LK +   KE+HG+IIR  L  DL +  +++ +Y  CG +   +
Sbjct: 242 LLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQ 301

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F+++E K +VSW ++I+ Y+ NG  + AL +F  M    ++   I+++    A S L 
Sbjct: 302 ALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 361

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L+ G+E + + ++     +  +A SL+DMYA+ G++  ++KVFN ++ K    W +MI 
Sbjct: 362 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 421

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
             G+HG  K AI LF +M+     PD +TFL +L AC+HSGLI+EG ++L+ M+  + L 
Sbjct: 422 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 481

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           P  +HYAC++D+LGRA  L++A + V   M  E    +W +LL +CR+H N E+GE VA 
Sbjct: 482 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAA 541

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           KL EL+P  P NYVL+SN++A   KW+DV +VR RM    L+K  G SWIE+  K+ SF+
Sbjct: 542 KLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFV 601

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
             ++     +EI K L  I E    + GY   T  V H++ EEEK++ L GHSE+LA+ Y
Sbjct: 602 VGERFLDGFEEI-KSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTY 660

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G++K++EG+ IR+ KNLR+CVDCH+  KL+S++  RE+VVRD  RFHHF+ GVCSCGDYW
Sbjct: 661 GLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 160/568 (28%), Positives = 279/568 (49%), Gaps = 22/568 (3%)

Query: 21  RTVFTWNAMLGAYVSNG---EPLRVL-ETYSRMRVLGISVDAFTFPCVIKACAMLKDLDC 76
           R   +WN+M+  +  NG   E   +L E            D  T   V+  CA  +++  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G  +HG  +K   D    + N+L+ MY+KC     A+ +F +M   ++VV WN+++  +S
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-KMNNNKNVVSWNTMVGGFS 119

Query: 137 ASGQCLEALGLFREMQRVG--LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
           A G       + R+M   G  +  +  T + A+  C   SF     E+H  ++K      
Sbjct: 120 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 179

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
             VANA +A YA+CG ++ A  V + + +K   SWN+++ G  Q++    ++    +++ 
Sbjct: 180 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 239

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
           +G  PD     + +SA  +L +L  GKE+H + I+     DL +  +++ +Y  C  +  
Sbjct: 240 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 299

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
           +  +F  M  +  +SW T+I GY QN    +AL +FR + L G+    + +  V  ACS 
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 359

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L  +   +E H Y ++  L  D  I  +++D+Y K G+I  S  VF  ++ K   SW +M
Sbjct: 360 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 419

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKG 492
           I  Y  +GLA EA++LF  M       D +T +  L+A +   ++ +G + L+   ++  
Sbjct: 420 IMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ--MKSS 477

Query: 493 FNLEGSVA--SSLVDMYARCGALDIANKVF--NCVQTKDLILWTSMINANGLHGR----G 544
           F L+ ++   + ++DM  R G LD A +V      +  D+ +W S++++  +H       
Sbjct: 478 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 537

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYA 572
           KVA  LF   E E   P++   L+ LYA
Sbjct: 538 KVAAKLF---ELEPEKPENYVLLSNLYA 562



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 233/487 (47%), Gaps = 24/487 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG--ISVDA 58
           MY KCG + +A+ +F   + + V +WN M+G + + G+     +   +M   G  +  D 
Sbjct: 86  MYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 145

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            T    +  C     L    ++H   LK  +   + + N+ VA YAKC     A+++F  
Sbjct: 146 VTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHG 205

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           +  K  V  WN++I  ++ S     +L    +M+  GL+ +++T  + L AC       L
Sbjct: 206 IRSK-TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 264

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G E+H   +++     ++V  +++++Y  CG++     +   +E+K  VSWN+++TG++Q
Sbjct: 265 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ 324

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N    +A+  FR++   G +   +  +    A   L +L  G+E HAYA+K     D  I
Sbjct: 325 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI 384

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             +L+DMYAK   +    +VF  +  +   SW  +I GY  +    +A++LF  +Q  G 
Sbjct: 385 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 444

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
           + D +    VL AC+       GL+ + Q K   G  ++  L        ++D+ G+ G 
Sbjct: 445 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG--LKPNLKHYA---CVIDMLGRAGQ 499

Query: 412 IDYSRNVF--ESIESKDVVSWTSMISS-YVHNGL---ANEALELFYLMNEANVESDSITL 465
           +D +  V   E  E  DV  W S++SS  +H  L      A +LF L  E   + ++  L
Sbjct: 500 LDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE---KPENYVL 556

Query: 466 VSALSAA 472
           +S L A 
Sbjct: 557 LSNLYAG 563


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 282/780 (36%), Positives = 458/780 (58%), Gaps = 12/780 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE-K 122
           ++KAC    +L+ G  +H  ++  G      ++NSL+ +Y+KC D+  A  +F  MG  K
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREM---QRVGLVTNAYTFVAALQACEDSSFETLG 179
            D+V W++IIS ++ +     AL  F  M    R  +  N Y F A L++C +  F T G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164

Query: 180 MEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLY-QLENKDSVSWNSMLTGFV 237
           + I A  +K+G  +  V V  ALI M+ + G   ++A +++ ++++K+ V+W  M+T + 
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q  L   A+  F  L  +   PD+    + +SA   L     GK+LH++ I+ G  SD+ 
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +G TL+DMYAK   V    ++F  M   + +SWT +I+GY Q+    +A++LF  +    
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSR 416
           +  +     SVL AC+ L      K++HG  I+ GLS +  + N+++++Y + G ++ +R
Sbjct: 345 VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECAR 404

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSL 475
             F  +  K+++S+ +   +   N  A ++ E F + +    V +   T    LS A+ +
Sbjct: 405 KAFNILFEKNLISYNTAADA---NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACI 461

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             + KG++++  I++ GF     + ++L+ MY++CG  + A +VFN +  +++I WTS+I
Sbjct: 462 GTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSII 521

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           +    HG    A++LFY+M      P+ +T++A+L ACSH GLI+E  K    M  ++ +
Sbjct: 522 SGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSI 581

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
            P  EHYAC+VDLLGR+  L EA +F+ SM  +  A VW   LG+CRVH N +LGE  AK
Sbjct: 582 SPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAK 641

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           K+LE +P +P  Y+L+SN++A+  +W DV  +R  M+   L K  G SWIE+ N++H F 
Sbjct: 642 KILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFH 701

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
             D SH ++ +IY +L E+  K+ +  GY+  T FVLH+VE+E+K Q L+ HSE++A+AY
Sbjct: 702 VGDTSHPQARKIYDELDELALKI-KNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAY 760

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            ++ + +   IR+ KNLRVC DCH+  K +S + GRE+VVRDANRFHH + G CSC DYW
Sbjct: 761 ALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 191/378 (50%), Gaps = 12/378 (3%)

Query: 1   MYGKCG-SVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           M+ K G  +  A  +FDK+  + + TW  M+  Y   G     ++ + R+ V   + D F
Sbjct: 190 MFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKF 249

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++ AC  L+    G ++H  V++ G  S  F+  +LV MYAK      +R++F+ M
Sbjct: 250 TLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTM 309

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               +V+ W ++IS Y  S Q  EA+ LF  M    +  N +TF + L+AC       +G
Sbjct: 310 LH-HNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIG 368

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H  T+K G +    V N+LI MYAR G M  A      L  K+ +S+N+        
Sbjct: 369 KQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNT------AA 422

Query: 240 DLYCKAM----QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           D   KA+     F  E++  G           +S +  +G ++ G+++HA  +K GF ++
Sbjct: 423 DANAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTN 482

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           L I N L+ MY+KC       +VF  M  ++ I+WT+II+G+A++    KALELF  +  
Sbjct: 483 LCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLE 542

Query: 356 EGLDADVMIIGSVLMACS 373
            G+  + +   +VL ACS
Sbjct: 543 IGVKPNEVTYIAVLSACS 560



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 187/386 (48%), Gaps = 24/386 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K  +V ++ ++F+ +    V +W A++  YV + +    ++ +  M    ++ + FT
Sbjct: 292 MYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFT 351

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+KACA L D   G ++HG  +K G  + + + NSL+ MYA+      AR+ F+ + 
Sbjct: 352 FSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILF 411

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLF-REMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           EK +++ +N   +A  A+ + L++   F  E++  G+  + +T+   L           G
Sbjct: 412 EK-NLISYN---TAADANAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKG 467

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IHA  VKSG    + + NALI+MY++CG    A  V   +  ++ ++W S+++GF ++
Sbjct: 468 EQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKH 527

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               KA++ F E+   G KP++V  +  +SA   +G L++    H  ++        +  
Sbjct: 528 GFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVG-LIDEAWKHFNSMHYNHSISPR-- 584

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAG-YAQNNCHLKALE 348
              M+ YA  C V+ +GR    + A +FI+          W T +       N  L    
Sbjct: 585 ---MEHYA--CMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHA 639

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSG 374
             + ++ E  D    I+ S L A  G
Sbjct: 640 AKKILEREPHDPATYILLSNLYASEG 665


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 295/857 (34%), Positives = 506/857 (59%), Gaps = 31/857 (3%)

Query: 1    MYGKC-GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV----LGIS 55
            MY  C  S+ DA ++F+++  +T  +WN+++  Y   G+ +   + +S M+     L   
Sbjct: 186  MYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCR 245

Query: 56   VDAFTF-PCVIKACAMLKDLDCGAKIHGLVL----KCGYDSTDFIVNSLVAMYAKCYDFR 110
             + +TF   V  AC+++   DCG  +   +L    K  +    ++ ++LV+ +A+     
Sbjct: 246  PNEYTFCSLVTVACSLV---DCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLID 302

Query: 111  KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
             A+ +F++M ++  V + N ++   +   Q  EA  +F+EM+ + +  NA ++   L A 
Sbjct: 303  SAKMIFEQMDDRNAVTM-NGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVLLSAF 360

Query: 171  EDSSFETL------GMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLEN 223
              + F  L      G E+HA  +++   ++ + + NAL+ +YA+C  +  A  +   + +
Sbjct: 361  --TEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPS 418

Query: 224  KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
            KD+VSWNS+++G   N+ + +A+  F  ++  G  P +   ++ +S+   LG ++ G+++
Sbjct: 419  KDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQI 478

Query: 284  HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
            H   IK G   D+ + N L+ +YA+  C+    +VF+ M   D +SW + I   A +   
Sbjct: 479  HGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEAS 538

Query: 344  -LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNA 401
             L+A++ F  +   G   + +   ++L A S L  +   ++IH  I++  ++D   I N 
Sbjct: 539  VLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENT 598

Query: 402  IVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
            ++  YGKC  ++    +F  + E +D VSW +MIS Y+HNG+ ++A+ L +LM +     
Sbjct: 599  LLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRL 658

Query: 461  DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
            D  TL + LSA +S++ L++G E++   IR     E  V S+LVDMYA+CG +D A++ F
Sbjct: 659  DDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFF 718

Query: 521  NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
              +  +++  W SMI+    HG G  A+ LF +M+     PDH+TF+ +L ACSH GL++
Sbjct: 719  ELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVD 778

Query: 581  EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            EG +  + M   Y+L P  EH++C+VDLLGRA  +++  +F+++M + P A +W  +LGA
Sbjct: 779  EGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGA 838

Query: 641  -CRVHS-NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
             CR +S N ELG   AK L+EL+P N  NYVL+SN+ AA  KW+DVE+ R+ MR + +KK
Sbjct: 839  CCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKK 898

Query: 699  TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
              G SW+ + + +H F+A D++H E ++IY KL EI  K+ R+ GYV +T++ L+++E E
Sbjct: 899  EAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKM-RDLGYVPETKYALYDLELE 957

Query: 759  EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
             K ++L  HSE+LAIA+ + + +E   IRI KNLRVC DCH+  K +S +  R++++RD+
Sbjct: 958  NKEELLSYHSEKLAIAFVLTRQSELP-IRIIKNLRVCGDCHTAFKYISNIVNRQIILRDS 1016

Query: 819  NRFHHFEAGVCSCGDYW 835
            NRFHHF+ G+CSC DYW
Sbjct: 1017 NRFHHFDGGICSCQDYW 1033



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 269/504 (53%), Gaps = 16/504 (3%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H  + K G  S  F  N+LV ++ +  +   A++LFD M +K ++V W+ ++S Y+ +
Sbjct: 60  QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQK-NLVSWSCLVSGYAQN 118

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACED--SSFETLGMEIHAATVKSGQNLQVY 196
           G   EA  LFR +   GL+ N Y   +AL+AC++   +   LGMEIH    KS     + 
Sbjct: 119 GMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMV 178

Query: 197 VANALIAMYARC-GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           ++N L++MY+ C   + +A  V  +++ K S SWNS+++ + +      A + F  +Q  
Sbjct: 179 LSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQRE 238

Query: 256 GQ----KPDQ--VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
                 +P++   C++  V+ S     L   +++ A   K  FV DL +G+ L+  +A+ 
Sbjct: 239 ATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARY 298

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ--LEGLDADVMIIGS 367
             ++    +F QM  ++ ++   ++ G A+ +   +A ++F+ ++  +E   +   ++ S
Sbjct: 299 GLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLS 358

Query: 368 VLMACSGLK-CMSQTKEIHGYIIRKGLSDLVIL--NAIVDVYGKCGNIDYSRNVFESIES 424
                S LK    + +E+H Y+IR  L D+ IL  NA+V++Y KC  ID +R++F+ + S
Sbjct: 359 AFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPS 418

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           KD VSW S+IS   HN    EA+  F+ M    +     +++S LS+ +SL  +  G+++
Sbjct: 419 KDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQI 478

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +G  I+ G +L+ SV+++L+ +YA    ++   KVF  +   D + W S I A       
Sbjct: 479 HGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEAS 538

Query: 545 KV-AIDLFYKMEAESFAPDHITFL 567
            + AI  F +M    + P+ +TF+
Sbjct: 539 VLQAIKYFLEMMQAGWKPNRVTFI 562



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 173/653 (26%), Positives = 328/653 (50%), Gaps = 38/653 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++ + G+++ A++LFD++ Q+ + +W+ ++  Y  NG P      +  +   G+  + + 
Sbjct: 83  IFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYA 142

Query: 61  FPCVIKACAMLKD--LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY-DFRKARQLFD 117
               ++AC  L    L  G +IHGL+ K  Y S   + N L++MY+ C      AR++F+
Sbjct: 143 IGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFE 202

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR----VGLVTNAYTFVAALQ-ACE- 171
            +  K     WNSIIS Y   G  + A  LF  MQR    +    N YTF + +  AC  
Sbjct: 203 EIKMKTSAS-WNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSL 261

Query: 172 -DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
            D    TL  ++ A   KS     +YV +AL++ +AR G +  A  +  Q++++++V+ N
Sbjct: 262 VDCGL-TLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMN 320

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA------VSASGRLGNLLNGK--- 281
            ++ G  +     +A + F+E++        +  +NA      +SA     NL  GK   
Sbjct: 321 GLMVGLARQHQGEEAAKIFKEMK-------DLVEINASSYAVLLSAFTEFSNLKEGKRKG 373

Query: 282 -ELHAYAIKQGFVSD-LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
            E+HAY I+   V   + IGN L+++YAKC  ++    +F  M ++D +SW +II+G   
Sbjct: 374 QEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDH 433

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
           N    +A+  F T++  G+      + S L +C+ L  +   ++IHG  I+ GL  D+ +
Sbjct: 434 NERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSV 493

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN-EALELFYLMNEAN 457
            NA++ +Y +   ++  + VF  +   D VSW S I +   +  +  +A++ F  M +A 
Sbjct: 494 SNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAG 553

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
            + + +T ++ LSA SSLS+L+ G++++  I++     + ++ ++L+  Y +C  ++   
Sbjct: 554 WKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCE 613

Query: 518 KVFNCV-QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            +F+ + + +D + W +MI+    +G    A+ L + M  +    D  T   +L AC+  
Sbjct: 614 IIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASV 673

Query: 577 GLINEGKKFLEIMRCDYQ--LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
             +  G   +E+  C  +  L+      + LVD+  +   ++ A +F   M +
Sbjct: 674 ATLERG---MEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPV 723



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 239/476 (50%), Gaps = 20/476 (4%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H    K+G    V+  N L+ ++ R G +  A  +  ++  K+ VSW+ +++G+ QN 
Sbjct: 60  QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNG 119

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG-NLLN-GKELHAYAIKQGFVSDLQI 298
           +  +A   FR +  AG  P+     +A+ A   LG N+L  G E+H    K  + SD+ +
Sbjct: 120 MPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVL 179

Query: 299 GNTLMDMYAKC-CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
            N LM MY+ C   ++   RVF ++  +   SW +II+ Y +    + A +LF ++Q E 
Sbjct: 180 SNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREA 239

Query: 358 LDA-----DVMIIGSVLMACSGLKC-MSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCG 410
            +      +      V +ACS + C ++  +++   I +   + DL + +A+V  + + G
Sbjct: 240 TELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYG 299

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            ID ++ +FE ++ ++ V+   ++          EA ++F  M +  VE ++ +    LS
Sbjct: 300 LIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVLLS 358

Query: 471 AASSLSILK----KGKELNGFIIRKGF-NLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
           A +  S LK    KG+E++ ++IR    ++   + ++LV++YA+C A+D A  +F  + +
Sbjct: 359 AFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPS 418

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           KD + W S+I+    + R + A+  F+ M      P   + ++ L +C+  G I  G++ 
Sbjct: 419 KDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQI 478

Query: 586 L-EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
             E ++C   LD    +   L+ L    + +EE YQ V  +  E     W + +GA
Sbjct: 479 HGEGIKCGLDLDVSVSN--ALLTLYAETDCMEE-YQKVFFLMPEYDQVSWNSFIGA 531



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 205/435 (47%), Gaps = 23/435 (5%)

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           +  +LH    K G  SD+   NTL++++ +   +    ++F +M  ++ +SW+ +++GYA
Sbjct: 57  DAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYA 116

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS--GLKCMSQTKEIHGYIIRKGL-SD 395
           QN    +A  LFR +   GL  +   IGS L AC   G   +    EIHG I +    SD
Sbjct: 117 QNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASD 176

Query: 396 LVILNAIVDVYGKC-GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM- 453
           +V+ N ++ +Y  C  +ID +R VFE I+ K   SW S+IS Y   G A  A +LF  M 
Sbjct: 177 MVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQ 236

Query: 454 ---NEANVESDSITLVSALSAASSLSI--LKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
               E N   +  T  S ++ A SL    L   +++   I +  F  +  V S+LV  +A
Sbjct: 237 REATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFA 296

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           R G +D A  +F  +  ++ +    ++       +G+ A  +F +M+ +    +  ++  
Sbjct: 297 RYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMK-DLVEINASSYAV 355

Query: 569 LLYACSHSGLINEGKKFLEIMRC----DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           LL A +    + EGK+  + +      +  +D W      LV+L  + N ++ A    + 
Sbjct: 356 LLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQL 415

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVA-KKLLELDPGNPGNYVLISNVFA-ASRKWK 682
           M  + T   W +++    +  N+   E VA    +  +   P  + +IS + + AS  W 
Sbjct: 416 MPSKDTVS-WNSIISG--LDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWI 472

Query: 683 DVEQVRMRMRGSGLK 697
            + Q   ++ G G+K
Sbjct: 473 MLGQ---QIHGEGIK 484


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 268/740 (36%), Positives = 438/740 (59%), Gaps = 77/740 (10%)

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
           LV+ YA C D ++ R++FD M EK++V LWN ++S Y+  G   E++ LF+ M   G+  
Sbjct: 2   LVSFYATCGDLKEGRRVFDTM-EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE- 59

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
                                                             GK +E+A  L
Sbjct: 60  --------------------------------------------------GKRSESASEL 69

Query: 219 Y-QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
           + +L ++D +SWNSM++G+V N L  + +  ++++   G   D    ++ +    + G L
Sbjct: 70  FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTL 129

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             GK +H+ AIK  F   +   NTL+DMY+KC  ++   RVF +M  ++ +SWT++IAGY
Sbjct: 130 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 189

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
            ++     A+ L + ++ EG+  DV+ I S+L AC+    +   K++H YI    + S+L
Sbjct: 190 TRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNL 249

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            + NA++D+Y KCG+++ + +VF ++  KD++SW +M+                      
Sbjct: 250 FVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------------G 288

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            ++ DS T+   L A +SLS L++GKE++G+I+R G++ +  VA++LVD+Y +CG L +A
Sbjct: 289 ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLA 348

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             +F+ + +KDL+ WT MI   G+HG G  AI  F +M      PD ++F+++LYACSHS
Sbjct: 349 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHS 408

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           GL+ +G +F  IM+ D+ ++P  EHYAC+VDLL R  +L +AY+F+ ++ I P A +W A
Sbjct: 409 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 468

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL  CR++ + EL E VA+++ EL+P N G YVL++N++A + KW++V+++R ++   GL
Sbjct: 469 LLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGL 528

Query: 697 KKTPGSSWIEIGNKIHSFIA-RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           +K PG SWIEI  +++ F++  + SH  S +I   L ++  K++ EG Y  +T++ L N 
Sbjct: 529 RKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEG-YFPKTKYALINA 587

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           +E +K   L GHSE+LA+A+G+L       IR+TKNLRVC DCH   K +S+   RE+V+
Sbjct: 588 DEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVL 647

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD+NRFHHF+ G CSC  +W
Sbjct: 648 RDSNRFHHFKDGYCSCRGFW 667



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 210/428 (49%), Gaps = 27/428 (6%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A +LFDK+  R V +WN+M+  YVSNG   R L  Y +M  LGI VD  T   V+  CA 
Sbjct: 66  ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAK 125

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
              L  G  +H L +K  ++      N+L+ MY+KC D   A ++F++MGE+ +VV W S
Sbjct: 126 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER-NVVSWTS 184

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I+ Y+  G    A+ L ++M++ G+  +     + L AC  S     G ++H     + 
Sbjct: 185 MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 244

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               ++V NAL+ MYA+CG M  A  V   +  KD +SWN+M+                 
Sbjct: 245 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL-------------- 290

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
                  KPD       + A   L  L  GKE+H Y ++ G+ SD  + N L+D+Y KC 
Sbjct: 291 -------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 343

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            +     +F  + ++D +SWT +IAGY  +    +A+  F  ++  G++ D +   S+L 
Sbjct: 344 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 403

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS---DLVILNAIVDVYGKCGNIDYSRNVFESIE-SKD 426
           ACS    + Q      YI++   +    L     +VD+  + GN+  +    E++  + D
Sbjct: 404 ACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPD 462

Query: 427 VVSWTSMI 434
              W +++
Sbjct: 463 ATIWGALL 470



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 151/333 (45%), Gaps = 30/333 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F+K+ +R V +W +M+  Y  +G     +    +M   G+ +D   
Sbjct: 157 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVA 216

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA    LD G  +H  +      S  F+ N+L+ MYAKC     A  +F  M 
Sbjct: 217 ITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMV 276

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D++ WN+++                       L  ++ T    L AC   S    G 
Sbjct: 277 VK-DIISWNTMVGE---------------------LKPDSRTMACILPACASLSALERGK 314

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   +++G +   +VANAL+ +Y +CG +  A  +   + +KD VSW  M+ G+  + 
Sbjct: 315 EIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHG 374

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E++ AG +PD+V  ++ + A    G L  G     Y +K  F  + +   
Sbjct: 375 YGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPK--- 430

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
             ++ YA  C V+ + R      A  FI    I
Sbjct: 431 --LEHYA--CMVDLLSRTGNLSKAYKFIETLPI 459


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 262/745 (35%), Positives = 436/745 (58%), Gaps = 12/745 (1%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F +N +++ Y+   D   A+ LF       +   W  ++ A++A+G+  +AL LFR M  
Sbjct: 75  FSLNLILSAYSSSGDLPAAQHLF-LSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133

Query: 154 VGLVTN--AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
            G++ +    T V  L  C   S       +H   +K G +  V+V N L+  Y + G +
Sbjct: 134 EGVIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 186

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  V  ++ +KD+V++N+M+ G  +  L+ +A+Q F  ++ AG         + ++ +
Sbjct: 187 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVA 246

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             + +LL G ++HA  ++   V ++ + N+L+D Y+KC C++ M R+F +M  +D +S+ 
Sbjct: 247 AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYN 306

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
            IIA YA N C    L LFR +Q  G D  V+   ++L     L  +   K+IH  ++  
Sbjct: 307 VIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL 366

Query: 392 GL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           GL S+ ++ NA++D+Y KCG +D +++ F +   K  +SWT++I+ YV NG   EAL+LF
Sbjct: 367 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 426

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
             M  A +  D  T  S + A+SSL+++  G++L+ ++IR G+       S LVDMYA+C
Sbjct: 427 SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC 486

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G LD A + F+ +  ++ I W ++I+A   +G  K AI +F  M    F PD +TFL++L
Sbjct: 487 GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 546

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            ACSH+GL +E  K+  +M+  Y + PW EHYAC++D LGR     +  + +  M  +  
Sbjct: 547 AACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKAD 606

Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
             +W ++L +CR+H N+EL  + A KL  ++P +   YV++SN++A + +W+D   V+  
Sbjct: 607 PIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 666

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
           MR  G++K  G SW+EI  KI+SF + D +    DEI  +L  + ++++++ GY      
Sbjct: 667 MRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQ-GYKPDITC 725

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
            LH V+ E K++ L  HSERLAIA+ ++ +  G+ IRI KNL  C+DCH+  K++S++  
Sbjct: 726 ALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVN 785

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           R+++VRD+ RFHHF+ GVCSCGDYW
Sbjct: 786 RDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 158/569 (27%), Positives = 278/569 (48%), Gaps = 18/569 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A+ LF     R   TW  M+ A+ + G     L  +  M   G+  D  T 
Sbjct: 84  YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTV 143

Query: 62  PCVI--KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
             V+    C +         +H   +K G D+  F+ N+L+  Y K      AR++F  M
Sbjct: 144 TTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM 196

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +K D V +N+++   S  G   +AL LF  M+R G+    +TF + L      +   LG
Sbjct: 197 HDK-DAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLG 255

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++HA  ++S   L V+V N+L+  Y++C  + +   +  ++  +D+VS+N ++  +  N
Sbjct: 256 HQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWN 315

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                 ++ FRE+Q  G     +     +S +G L ++  GK++HA  +  G  S+  +G
Sbjct: 316 QCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLG 375

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+DMY+KC  ++     F   + +  ISWT +I GY QN  H +AL+LF  ++  GL 
Sbjct: 376 NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 435

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI-VDVYGKCGNIDYSRNV 418
            D     S++ A S L  +   +++H Y+IR G    V   ++ VD+Y KCG +D +   
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 495

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  ++ +SW ++IS+Y H G A  A+++F  M       DS+T +S L+A S   + 
Sbjct: 496 FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLA 555

Query: 479 KKGKELNGFIIRKGFNLEG--SVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
            +  +    +++  +++       + ++D   R G      K+   +  K D I+WTS++
Sbjct: 556 DECMKY-FHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAP 561
           ++  +HG     +VA D  + ME     P
Sbjct: 615 HSCRIHGNQELARVAADKLFGMEPTDATP 643



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 218/449 (48%), Gaps = 10/449 (2%)

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            ++  N +++ Y+  G +  A  +     ++++ +W  M+           A+  FR + 
Sbjct: 73  NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
           G G  PD+V     ++  G          LH +AIK G  + + + NTL+D Y K   + 
Sbjct: 133 GEGVIPDRVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLA 187

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
              RVF +M  +D +++  ++ G ++   H +AL+LF  ++  G+ A      S+L   +
Sbjct: 188 AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA 247

Query: 374 GLKCMSQTKEIHGYIIRK-GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
           G+  +    ++H  ++R   + ++ + N+++D Y KC  +D  R +F+ +  +D VS+  
Sbjct: 248 GMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNV 307

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           +I++Y  N  A   L LF  M +   +   +   + LS A SL  +  GK+++  ++  G
Sbjct: 308 IIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLG 367

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
              E  + ++L+DMY++CG LD A   F+    K  I WT++I     +G+ + A+ LF 
Sbjct: 368 LASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFS 427

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGR 611
            M      PD  TF +++ A S   +I  G++    ++R  Y+   +    + LVD+  +
Sbjct: 428 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG--SVLVDMYAK 485

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
              L+EA +    M  E  +  W A++ A
Sbjct: 486 CGCLDEALRTFDEMP-ERNSISWNAVISA 513



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 184/387 (47%), Gaps = 26/387 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KC  + D  +LFD++ +R   ++N ++ AY  N     VL  +  M+ LG       +
Sbjct: 281 YSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPY 340

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++     L D+  G +IH  ++  G  S D + N+L+ MY+KC     A+  F    E
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSE 400

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K   + W ++I+ Y  +GQ  EAL LF +M+R GL  +  TF + ++A    +   LG +
Sbjct: 401 KS-AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H+  ++SG    V+  + L+ MYA+CG + EA     ++  ++S+SWN++++ +     
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 519

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG---------NLLNGKELHAYAI---K 289
              A++ F  +   G  PD V  ++ ++A    G         +L+     H Y+I   K
Sbjct: 520 AKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK----HQYSISPWK 575

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKAL 347
           + +         ++D   +  C + + ++  +M  + D I WT+I+       N  L  +
Sbjct: 576 EHYA-------CVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARV 628

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSG 374
              +   +E  DA   +I S + A +G
Sbjct: 629 AADKLFGMEPTDATPYVILSNIYARAG 655



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 11/239 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A+  F   S+++  +W A++  YV NG+    L+ +S MR  G+  D  T
Sbjct: 381 MYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRAT 440

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IKA + L  +  G ++H  +++ GY S+ F  + LV MYAKC    +A + FD M 
Sbjct: 441 FSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP 500

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE-----DSSF 175
           E+  +  WN++ISAY+  G+   A+ +F  M   G   ++ TF++ L AC      D   
Sbjct: 501 ERNSIS-WNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 559

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
           +   +  H  ++   +     V + L     R G  ++   +L ++  K D + W S+L
Sbjct: 560 KYFHLMKHQYSISPWKEHYACVIDTL----GRVGCFSQVQKMLVEMPFKADPIIWTSIL 614


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 287/803 (35%), Positives = 443/803 (55%), Gaps = 63/803 (7%)

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           K C  L+  +    I   V  CG   +    N +++  +KC     AR+LFD M ++++ 
Sbjct: 14  KVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDEC 73

Query: 126 ------------------------------VLWNSIISAYSASGQCLEALGLFREMQRVG 155
                                         + W+S+IS Y   G  +EAL LF EMQ  G
Sbjct: 74  SWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEG 133

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
              N +T+ + L+ C        G +IHA  +K+  +   +V   L+ MYA+C  + EA 
Sbjct: 134 ERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAE 193

Query: 216 GVLYQL--ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
             L++L  + ++ V W +M+TG+ QN    KA++ FR+++G G + +Q    + ++A G 
Sbjct: 194 -YLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGS 252

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           +     G ++H   ++ GF +++ +G+ L+DMY+KC  ++   R+   M   D +SW ++
Sbjct: 253 ISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSM 312

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           I G  +     +AL LFR + L  +  D     SVL   S +  M     +H  I++ G 
Sbjct: 313 IVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGF 372

Query: 394 SDLVILN-AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
               ++N A+VD+Y K G  DY+ +VFE +  KDV+SWTS+++  VHNG   EAL LF  
Sbjct: 373 EAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCE 432

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M    +  D I + + LSA + L++L+ GK+++   ++ G     SV +SLV MYA+CG 
Sbjct: 433 MRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGC 492

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           ++ ANKVF+ ++ +D+I WT++I     +GRG+                           
Sbjct: 493 IEDANKVFDSMEIQDVITWTALIVGYAQNGRGR--------------------------- 525

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
             H+GL+  G+ + + M   Y + P PEHYAC++DLLGR+  L EA + +  M ++P A 
Sbjct: 526 -DHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDAT 584

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           VW ALL ACRVH N ELGE  A  L EL+P N   YVL+SN+++A+ KW++  + R  M+
Sbjct: 585 VWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMK 644

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
             G+ K PG SWIE+ +K+H F++ D+SH  + EIY K+ EI   L +E GYV    F L
Sbjct: 645 LRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIM-ILIKEAGYVPDMNFAL 703

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
           H+++EE K   L  HSE+LA+A+G+L    G+ IRI KNLR+C DCH+  K VS +F R 
Sbjct: 704 HDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRH 763

Query: 813 LVVRDANRFHHFEAGVCSCGDYW 835
           +++RD+N FHHF  G CSC DYW
Sbjct: 764 VILRDSNCFHHFREGACSCSDYW 786



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 188/623 (30%), Positives = 315/623 (50%), Gaps = 67/623 (10%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLR----------- 41
           KCG V DA +LFD +  R   +WN M+GAY ++G            P+R           
Sbjct: 53  KCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISG 112

Query: 42  ---------VLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDST 92
                     LE +  M+  G   + FT+  V++ C+M   L+ G +IH   +K  +DS 
Sbjct: 113 YCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSN 172

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
            F+V  LV MYAKC    +A  LF+   +K + VLW ++++ YS +G   +A+  FR+M+
Sbjct: 173 AFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMR 232

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
             G+  N +TF + L AC   S    G ++H   V+SG    V+V +AL+ MY++CG ++
Sbjct: 233 GEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLS 292

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
            A  +L  +E  D VSWNSM+ G V+  L  +A+  FR +     K D+    + ++   
Sbjct: 293 NARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFS 352

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
            + ++ N   +H+  +K GF +   + N L+DMYAK    +Y   VF +MT +D ISWT+
Sbjct: 353 FVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTS 412

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           ++ G   N  + +AL LF  +++ G+  D ++I +VL AC+ L  +   K++H   ++ G
Sbjct: 413 LVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSG 472

Query: 393 L-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
           L S L + N++V +Y KCG I+ +  VF+S+E +DV++WT++I  Y  NG   +   L  
Sbjct: 473 LGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGL-- 530

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
                 VE       S   +   +  +K G E                 + ++D+  R G
Sbjct: 531 ------VEHGR----SYFQSMEEVYGIKPGPEH---------------YACMIDLLGRSG 565

Query: 512 ALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFL 567
            L  A ++ N +  + D  +W +++ A  +HG    G+ A +  +++E ++  P     L
Sbjct: 566 KLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVP--YVLL 623

Query: 568 ALLYACSHSGLINEGKKFLEIMR 590
           + LY  S +G   E  K   +M+
Sbjct: 624 SNLY--SAAGKWEEAAKTRRLMK 644



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 188/341 (55%), Gaps = 2/341 (0%)

Query: 1   MYGKCGSVLDAEQLFD-KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KC  +L+AE LF+    +R    W AM+  Y  NG+  + +E +  MR  GI  + F
Sbjct: 182 MYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQF 241

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP ++ AC  +     GA++HG +++ G+ +  F+ ++LV MY+KC D   AR++ + M
Sbjct: 242 TFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETM 301

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E +D V WNS+I      G   EAL LFR M    +  + +T+ + L            
Sbjct: 302 -EVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNA 360

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           M +H+  VK+G      V NAL+ MYA+ G    A  V  ++ +KD +SW S++TG V N
Sbjct: 361 MSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN 420

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             Y +A++ F E++  G  PDQ+     +SA   L  L  GK++HA  +K G  S L + 
Sbjct: 421 GSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVD 480

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           N+L+ MYAKC C+    +VF  M  QD I+WT +I GYAQN
Sbjct: 481 NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQN 521



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 151/291 (51%), Gaps = 9/291 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A ++ + +      +WN+M+   V  G     L  +  M +  + +D FT
Sbjct: 284 MYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFT 343

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P V+   + + D+     +H L++K G+++   + N+LV MYAK   F  A  +F++M 
Sbjct: 344 YPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMT 403

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K DV+ W S+++    +G   EAL LF EM+ +G+  +     A L AC + +    G 
Sbjct: 404 DK-DVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGK 462

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN- 239
           ++HA  +KSG    + V N+L++MYA+CG + +A  V   +E +D ++W +++ G+ QN 
Sbjct: 463 QVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG 522

Query: 240 ------DLYCKAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKEL 283
                  L      +F+ ++   G KP        +   GR G L+  KEL
Sbjct: 523 RGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKEL 573



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 29/236 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G    A  +F+K++ + V +W +++   V NG     L  +  MR++GI  D   
Sbjct: 385 MYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIV 444

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA L  L+ G ++H   LK G  S+  + NSLV+MYAKC     A ++FD M 
Sbjct: 445 IAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM- 503

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E +DV+ W ++I  Y+ +G         R     GLV +  ++  +++       E  G 
Sbjct: 504 EIQDVITWTALIVGYAQNG---------RGRDHAGLVEHGRSYFQSME-------EVYG- 546

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
                 +K G          +I +  R GK+ EA  +L Q+    D+  W ++L  
Sbjct: 547 ------IKPGPEHYA----CMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAA 592


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/745 (35%), Positives = 436/745 (58%), Gaps = 12/745 (1%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F +N +++ Y+   D   A+ LF       +   W  ++ A++A+G+  +AL LFR M  
Sbjct: 75  FSLNLILSAYSSSGDLPAAQHLF-LSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133

Query: 154 VGLVTN--AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
            G++ +    T V  L  C   S       +H   +K G +  V+V N L+  Y + G +
Sbjct: 134 EGVIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 186

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  V  ++ +KD+V++N+M+ G  +  L+ +A+Q F  ++ AG         + ++ +
Sbjct: 187 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVA 246

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             + +LL G ++HA  ++   V ++ + N+L+D Y+KC C++ M R+F +M  +D +S+ 
Sbjct: 247 AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYN 306

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
            IIA YA N C    L LFR +Q  G D  V+   ++L     L  +   K+IH  ++  
Sbjct: 307 VIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL 366

Query: 392 GL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           GL S+ ++ NA++D+Y KCG +D +++ F +   K  +SWT++I+ YV NG   EAL+LF
Sbjct: 367 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 426

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
             M  A +  D  T  S + A+SSL+++  G++L+ ++IR G+       S LVDMYA+C
Sbjct: 427 SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC 486

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G LD A + F+ +  ++ I W ++I+A   +G  K AI +F  M    F PD +TFL++L
Sbjct: 487 GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 546

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            ACSH+GL +E  K+  +M+  Y + PW EHYAC++D LGR     +  + +  M  +  
Sbjct: 547 AACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKAD 606

Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
             +W ++L +CR+H N+EL  + A KL  ++P +   YV++SN++A + +W+D   V+  
Sbjct: 607 PIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 666

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
           MR  G++K  G SW+EI  KI+SF + D +    DEI  +L  + ++++++ GY      
Sbjct: 667 MRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQ-GYKPDITC 725

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
            LH V+ E K++ L  HSERLAIA+ ++ +  G+ IRI KNL  C+DCH+  K++S++  
Sbjct: 726 ALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVN 785

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           R+++VRD+ RFHHF+ GVCSCGDYW
Sbjct: 786 RDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 158/569 (27%), Positives = 278/569 (48%), Gaps = 18/569 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A+ LF     R   TW  M+ A+ + G     L  +  M   G+  D  T 
Sbjct: 84  YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTV 143

Query: 62  PCVI--KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
             V+    C +         +H   +K G D+  F+ N+L+  Y K      AR++F  M
Sbjct: 144 TTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM 196

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +K D V +N+++   S  G   +AL LF  M+R G+    +TF + L      +   LG
Sbjct: 197 HDK-DAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLG 255

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++HA  ++S   L V+V N+L+  Y++C  + +   +  ++  +D+VS+N ++  +  N
Sbjct: 256 HQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWN 315

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                 ++ FRE+Q  G     +     +S +G L ++  GK++HA  +  G  S+  +G
Sbjct: 316 QCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLG 375

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+DMY+KC  ++     F   + +  ISWT +I GY QN  H +AL+LF  ++  GL 
Sbjct: 376 NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 435

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI-VDVYGKCGNIDYSRNV 418
            D     S++ A S L  +   +++H Y+IR G    V   ++ VD+Y KCG +D +   
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 495

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  ++ +SW ++IS+Y H G A  A+++F  M       DS+T +S L+A S   + 
Sbjct: 496 FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLA 555

Query: 479 KKGKELNGFIIRKGFNLEG--SVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
            +  +    +++  +++       + ++D   R G      K+   +  K D I+WTS++
Sbjct: 556 DECMKYF-HLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAP 561
           ++  +HG     +VA D  + ME     P
Sbjct: 615 HSCRIHGNQELARVAADKLFGMEPTDATP 643



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 218/448 (48%), Gaps = 10/448 (2%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           ++  N +++ Y+  G +  A  +     ++++ +W  M+           A+  FR + G
Sbjct: 74  IFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G  PD+V     ++  G          LH +AIK G  + + + NTL+D Y K   +  
Sbjct: 134 EGVIPDRVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAA 188

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             RVF +M  +D +++  ++ G ++   H +AL+LF  ++  G+ A      S+L   +G
Sbjct: 189 ARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAG 248

Query: 375 LKCMSQTKEIHGYIIRK-GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +  +    ++H  ++R   + ++ + N+++D Y KC  +D  R +F+ +  +D VS+  +
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I++Y  N  A   L LF  M +   +   +   + LS A SL  +  GK+++  ++  G 
Sbjct: 309 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
             E  + ++L+DMY++CG LD A   F+    K  I WT++I     +G+ + A+ LF  
Sbjct: 369 ASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSD 428

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRA 612
           M      PD  TF +++ A S   +I  G++    ++R  Y+   +    + LVD+  + 
Sbjct: 429 MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG--SVLVDMYAKC 486

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGA 640
             L+EA +    M  E  +  W A++ A
Sbjct: 487 GCLDEALRTFDEMP-ERNSISWNAVISA 513



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 184/387 (47%), Gaps = 26/387 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KC  + D  +LFD++ +R   ++N ++ AY  N     VL  +  M+ LG       +
Sbjct: 281 YSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPY 340

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++     L D+  G +IH  ++  G  S D + N+L+ MY+KC     A+  F    E
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSE 400

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K   + W ++I+ Y  +GQ  EAL LF +M+R GL  +  TF + ++A    +   LG +
Sbjct: 401 KS-AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H+  ++SG    V+  + L+ MYA+CG + EA     ++  ++S+SWN++++ +     
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 519

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG---------NLLNGKELHAYAI---K 289
              A++ F  +   G  PD V  ++ ++A    G         +L+     H Y+I   K
Sbjct: 520 AKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK----HQYSISPWK 575

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKAL 347
           + +         ++D   +  C + + ++  +M  + D I WT+I+       N  L  +
Sbjct: 576 EHYA-------CVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARV 628

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSG 374
              +   +E  DA   +I S + A +G
Sbjct: 629 AADKLFGMEPTDATPYVILSNIYARAG 655



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 11/239 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A+  F   S+++  +W A++  YV NG+    L+ +S MR  G+  D  T
Sbjct: 381 MYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRAT 440

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IKA + L  +  G ++H  +++ GY S+ F  + LV MYAKC    +A + FD M 
Sbjct: 441 FSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP 500

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE-----DSSF 175
           E+  +  WN++ISAY+  G+   A+ +F  M   G   ++ TF++ L AC      D   
Sbjct: 501 ERNSIS-WNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 559

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
           +   +  H  ++   +     V + L     R G  ++   +L ++  K D + W S+L
Sbjct: 560 KYFHLMKHQYSISPWKEHYACVIDTL----GRVGCFSQVQKMLVEMPFKADPIIWTSIL 614


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 272/798 (34%), Positives = 456/798 (57%), Gaps = 9/798 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G VL A ++F+++S R   +W AML  Y  NG     L  Y +M   G+    + 
Sbjct: 86  LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV 145

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +C   +    G  IH    K G+ S  F+ N+++ +Y +C  FR A ++F  M 
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V +N++IS ++  G    AL +F EMQ  GL  +  T  + L AC        G 
Sbjct: 206 HR-DTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGT 264

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+   K+G +    +  +L+ +Y +CG +  A  +    +  + V WN ML  F Q +
Sbjct: 265 QLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324

Query: 241 LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
              K+ + F ++Q AG +P+Q    C +   + +  +     G+++H+ ++K GF SD+ 
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL---GEQIHSLSVKTGFESDMY 381

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +   L+DMY+K   +    RV   +  +D +SWT++IAGY Q+ C   AL  F+ +Q  G
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           +  D + + S +  C+G+  M Q  +IH  I   G S D+ I NA+V++Y +CG I  + 
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           + FE +E KD ++   ++S +  +GL  EAL++F  M+++ V+ +  T VSALSA+++L+
Sbjct: 502 SSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            +K+GK+++  +I+ G + E  V ++L+ +Y +CG+ + A   F+ +  ++ + W ++I 
Sbjct: 562 EIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIIT 621

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           +   HGRG  A+DLF +M+ E   P+ +TF+ +L ACSH GL+ EG  + + M  +Y + 
Sbjct: 622 SCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIR 681

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P P+HYAC++D+ GRA  L+ A +F+  M I   A VW  LL AC+VH N E+GE  AK 
Sbjct: 682 PRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKH 741

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           LLEL+P +  +YVL+SN +A + KW + +QVR  MR  G++K PG SWIE+ N +H+F  
Sbjct: 742 LLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFV 801

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D+ H  +++IY  LA I +++ +  GY  +   + H+ E+E +      HSE+LA+ +G
Sbjct: 802 GDRLHPLAEQIYNFLAVINDRVAKV-GYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFG 860

Query: 777 VLKSTEGSLIRITKNLRV 794
           ++       +R+ KNLRV
Sbjct: 861 LMSLPPCMPLRVIKNLRV 878



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 168/630 (26%), Positives = 318/630 (50%), Gaps = 7/630 (1%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKAC-AMLKDLDC 76
           +++R   +    L  ++++ +P +VL  ++        +    F C ++AC    +    
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
             +IH   +  G      + N L+ +Y+K      AR++F+ +  +++V  W +++S Y+
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVS-WVAMLSGYA 119

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +G   EALGL+R+M R G+V   Y   + L +C  +     G  IHA   K G   +++
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V NA+I +Y RCG    A  V   + ++D+V++N++++G  Q      A++ F E+Q +G
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             PD V   + ++A   LG+L  G +LH+Y  K G  SD  +  +L+D+Y KC  V    
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            +F      + + W  ++  + Q N   K+ ELF  +Q  G+  +      +L  C+  +
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +   ++IH   ++ G  SD+ +   ++D+Y K G ++ +R V E ++ KDVVSWTSMI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            YV +    +AL  F  M +  +  D+I L SA+S  + ++ +++G +++  I   G++ 
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           + S+ ++LV++YARCG +  A   F  ++ KD I    +++     G  + A+ +F +M+
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMD 539

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANH 614
                 +  TF++ L A ++   I +GK+    +++  +  +   E    L+ L G+   
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFE--TEVGNALISLYGKCGS 597

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
            E+A      M  E     W  ++ +C  H
Sbjct: 598 FEDAKMEFSEMS-ERNEVSWNTIITSCSQH 626


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 271/724 (37%), Positives = 435/724 (60%), Gaps = 8/724 (1%)

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           MG K D+V W+++IS Y+ + +  EA+  F +M   G   N Y F    +AC +    +L
Sbjct: 1   MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60

Query: 179 GMEIHAATVKSGQ-NLQVYVANALIAMYARC-GKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           G  I    +K+G     V V  ALI M+ +  G +  A  V  ++ +++ V+W  M+T F
Sbjct: 61  GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            Q      A+  F ++  +G  PD+      VSA   +G L  G++ H   +K G   D+
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV 180

Query: 297 QIGNTLMDMYAKCCC---VNYMGRVFYQMTAQDFISWTTIIAGYAQNN-CHLKALELFRT 352
            +G +L+DMYAKC     V+   +VF +M   + +SWT II GY Q+  C  +A+ELF  
Sbjct: 181 CVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLE 240

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGN 411
           +    +  +     SVL AC+ L  +   ++++  +++  L+ +  + N+++ +Y +CGN
Sbjct: 241 MVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGN 300

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           ++ +R  F+ +  K++VS+ +++++Y  +  + EA ELF  +  A    ++ T  S LS 
Sbjct: 301 MENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSG 360

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
           ASS+  + KG++++  I++ GF     + ++L+ MY+RCG ++ A +VFN +   ++I W
Sbjct: 361 ASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISW 420

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
           TSMI     HG    A++ F+KM     +P+ +T++A+L ACSH GLI+EG K  + M+ 
Sbjct: 421 TSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKV 480

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
           ++ + P  EHYAC+VDLLGR+ HLEEA + V SM  +  A V    LGACRVH N +LG+
Sbjct: 481 EHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGK 540

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
             A+ +LE DP +P  Y+L+SN+ A++ +W++V ++R +M+   L K  G SWIE+ NK+
Sbjct: 541 HAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKV 600

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
           H F   D SH ++ EIY +L ++  K+ +E GY+  T FVLH+VEEE+K Q L+ HSE++
Sbjct: 601 HKFYVGDTSHPQAQEIYDELDQLALKI-KELGYIPSTDFVLHDVEEEQKEQYLFQHSEKI 659

Query: 772 AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           A+AYG + ++    IR+ KNLRVC DCH+  K  S +  +E+V+RDANRFHHF+ G CSC
Sbjct: 660 AVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSC 719

Query: 832 GDYW 835
            DYW
Sbjct: 720 NDYW 723



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 159/567 (28%), Positives = 297/567 (52%), Gaps = 17/567 (2%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
           ++R + +W+A++  Y +N +    +  +  M   G   + + F  V +AC+  +++  G 
Sbjct: 3   NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62

Query: 79  KIHGLVLKCGYDSTDFIVN-SLVAMYAKCY-DFRKARQLFDRMGEKEDVVLWNSIISAYS 136
            I G +LK GY  +D  V  +L+ M+ K   D   A ++FDRM ++ +VV W  +I+ + 
Sbjct: 63  IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDR-NVVTWTLMITRFQ 121

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
             G   +A+ LF +M   G V + +T    + AC +    +LG + H   +KSG +L V 
Sbjct: 122 QLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVC 181

Query: 197 VANALIAMYARC---GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC--KAMQFFRE 251
           V  +L+ MYA+C   G + +A  V  ++   + +SW +++TG+VQ+   C  +A++ F E
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSG-GCDREAIELFLE 240

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           +     KP+     + + A   L ++  G++++A  +K    S   +GN+L+ MY++C  
Sbjct: 241 MVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGN 300

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           +    + F  +  ++ +S+ TI+  YA++    +A ELF  ++  G   +     S+L  
Sbjct: 301 MENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSG 360

Query: 372 CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
            S +  + + ++IH  I++ G  S+L I NA++ +Y +CGNI+ +  VF  +   +V+SW
Sbjct: 361 ASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISW 420

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFII 489
           TSMI+ +  +G A  ALE F+ M EA V  + +T ++ LSA S + ++ +G K      +
Sbjct: 421 TSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKV 480

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GK 545
             G        + +VD+  R G L+ A ++ N +  K D ++  + + A  +HG    GK
Sbjct: 481 EHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGK 540

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYA 572
            A ++   +E +   P     L+ L+A
Sbjct: 541 HAAEMI--LEQDPHDPAAYILLSNLHA 565



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 254/500 (50%), Gaps = 28/500 (5%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A ++FD++  R V TW  M+  +   G     ++ +  M + G   D FT   V+
Sbjct: 93  GDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVV 152

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY---DFRKARQLFDRMGEK 122
            ACA +  L  G + H LV+K G D    +  SLV MYAKC        AR++FDRM   
Sbjct: 153 SACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRM-PV 211

Query: 123 EDVVLWNSIISAYSASGQC-LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            +V+ W +II+ Y  SG C  EA+ LF EM +  +  N +TF + L+AC + S   LG +
Sbjct: 212 HNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQ 271

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           ++A  VK        V N+LI+MY+RCG M  A      L  K+ VS+N+++  + ++  
Sbjct: 272 VYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLN 331

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A + F E++GAG   +     + +S +  +G +  G+++H+  +K GF S+L I N 
Sbjct: 332 SEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNA 391

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ MY++C  +    +VF +M   + ISWT++I G+A++    +ALE F  +   G+  +
Sbjct: 392 LISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPN 451

Query: 362 VMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            +   +VL ACS       GLK     K  HG + R     +     +VD+ G+ G+++ 
Sbjct: 452 EVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPR-----MEHYACVVDLLGRSGHLEE 506

Query: 415 SRNVFESIESK--DVVSWTSMISSYVHNG--LANEALELFYLMNEANVESDSITLVSALS 470
           +  +  S+  K   +V  T + +  VH    L   A E+  ++ +   +  +  L+S L 
Sbjct: 507 AMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEM--ILEQDPHDPAAYILLSNLH 564

Query: 471 AASS-----LSILKKGKELN 485
           A++        I KK KE N
Sbjct: 565 ASAGQWEEVAEIRKKMKERN 584



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 114/215 (53%), Gaps = 2/215 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG++ +A + FD + ++ + ++N ++ AY  +       E ++ +   G  V+AFT
Sbjct: 294 MYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFT 353

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++   + +  +  G +IH  +LK G+ S   I N+L++MY++C +   A Q+F+ MG
Sbjct: 354 FASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG 413

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  +V+ W S+I+ ++  G    AL  F +M   G+  N  T++A L AC      + G+
Sbjct: 414 DG-NVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGL 472

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEA 214
           +   +  V+ G   ++     ++ +  R G + EA
Sbjct: 473 KHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEA 507


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 259/718 (36%), Positives = 418/718 (58%), Gaps = 46/718 (6%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
           + + LQ C       LG ++HA  V +G ++  ++ + L+ +Y + G + +A  +  ++ 
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
            ++  SW +++  +     Y + ++ F  +   G +PD         A   L N   GK+
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           ++ Y +  GF  +  +  +++DM+ KC  ++   R F ++  +D   W  +++GY     
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILN 400
             KAL +FR + LEG+  + + I S + AC+ L  +   +EIHGY I+  +  SDL++ N
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252

Query: 401 AIVDVYGKCGNIDYSR-------------------------------------------N 417
           ++VD Y KC +++ +R                                           +
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  + ++DVV W S+IS+   +G +  AL+L   MN +NVE +++T+VSAL A S L+ 
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L++GKE++ FIIR G +    + +SL+DMY RCG++  + ++F+ +  +DL+ W  MI+ 
Sbjct: 373 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 432

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G+HG G  A++LF +       P+HITF  LL ACSHSGLI EG K+ ++M+ +Y +DP
Sbjct: 433 YGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 492

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             E YAC+VDLL RA    E  +F+  M  EP A VW +LLGACR+H N +L E  A+ L
Sbjct: 493 AVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYL 552

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
            EL+P + GNYVL++N+++A+ +W+D  ++R  M+  G+ K PG SWIE+  K+HSF+  
Sbjct: 553 FELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVG 612

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D SH   ++I  K+  +   + +E GYV  T FVL +V+E+EK   L GHSE++A+A+G+
Sbjct: 613 DTSHPLMEQISAKMESLYFDI-KEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGL 671

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +T G+ +RI KNLRVC DCHS  K +S++  R++++RD  RFHHF  GVCSCGDYW
Sbjct: 672 ISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 266/538 (49%), Gaps = 56/538 (10%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +++ C  L +L  G ++H  ++  G D  +F+ + L+ +Y +      AR++FD+M 
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +V  W +I+  Y   G   E + LF  M   G+  + + F    +AC +     +G 
Sbjct: 73  ER-NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 131

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +++   +  G      V  +++ M+ +CG+M  A     ++E KD   WN M++G+    
Sbjct: 132 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 191

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK-QGFVSDLQIG 299
            + KA+  FR++   G KP+ +   +AVSA   L  L +G+E+H Y IK +   SDL +G
Sbjct: 192 EFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 251

Query: 300 NTLMDMYAKCCCVNYMGR------------------------------------------ 317
           N+L+D YAKC  V    R                                          
Sbjct: 252 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIAC 311

Query: 318 -VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            VF +++ +D + W +II+  AQ+   + AL+L R + L  ++ + + + S L ACS L 
Sbjct: 312 SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLA 371

Query: 377 CMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            + Q KEIH +IIR GL     ILN+++D+YG+CG+I  SR +F+ +  +D+VSW  MIS
Sbjct: 372 ALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 431

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  +G   +A+ LF       ++ + IT  + LSA S   ++++G +    +++  + +
Sbjct: 432 VYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFK-MMKTEYAM 490

Query: 496 EGSVA--SSLVDMYARCGALDIANKVFNCVQT----KDLILWTSMINANGLHGRGKVA 547
           + +V   + +VD+ +R G     N+    ++      +  +W S++ A  +H    +A
Sbjct: 491 DPAVEQYACMVDLLSRAGQF---NETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLA 545



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 205/417 (49%), Gaps = 45/417 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G V DA ++FDK+S+R VF+W A++  Y   G+    ++ +  M   G+  D F 
Sbjct: 54  VYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFV 113

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V KAC+ LK+   G  ++  +L  G++    +  S++ M+ KC     AR+ F+ + 
Sbjct: 114 FPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI- 172

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E +DV +WN ++S Y++ G+  +AL +FR+M   G+  N+ T  +A+ AC + S    G 
Sbjct: 173 EFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGR 232

Query: 181 EIHAATVKSGQ-NLQVYVANALIAMYARC------------------------------- 208
           EIH   +K  + +  + V N+L+  YA+C                               
Sbjct: 233 EIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFT 292

Query: 209 ------------GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
                        +M  A  V  +L  +D V WNS+++   Q+     A+   RE+  + 
Sbjct: 293 QYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSN 352

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            + + V  V+A+ A  +L  L  GKE+H + I+ G  +   I N+L+DMY +C  +    
Sbjct: 353 VEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSR 412

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           R+F  M  +D +SW  +I+ Y  +   + A+ LF+  +  GL  + +   ++L ACS
Sbjct: 413 RIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACS 469



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 149/323 (46%), Gaps = 43/323 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ KCG +  A + F+++  + VF WN M+  Y S GE  + L  + +M + G+  ++ T
Sbjct: 155 MFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSIT 214

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKAR------ 113
               + AC  L  L  G +IHG  +K     +D +V NSLV  YAKC     AR      
Sbjct: 215 IASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMI 274

Query: 114 ---------------------------QLFDRMG---------EKEDVVLWNSIISAYSA 137
                                      + F RM             DVV+WNSIISA + 
Sbjct: 275 KQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQ 334

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
           SG+ + AL L REM    +  N  T V+AL AC   +    G EIH   ++ G +   ++
Sbjct: 335 SGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFI 394

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
            N+LI MY RCG + ++  +   +  +D VSWN M++ +  +     A+  F++ +  G 
Sbjct: 395 LNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGL 454

Query: 258 KPDQVCTVNAVSASGRLGNLLNG 280
           KP+ +   N +SA    G +  G
Sbjct: 455 KPNHITFTNLLSACSHSGLIEEG 477



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 120/233 (51%), Gaps = 1/233 (0%)

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGN 411
           + L   D  + I  S+L  C  L  +    ++H  ++  G+     L + +++VY + G 
Sbjct: 1   MDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC 60

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           ++ +R +F+ +  ++V SWT+++  Y   G   E ++LFYLM    V  D         A
Sbjct: 61  VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKA 120

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            S L   + GK++  +++  GF     V  S++DM+ +CG +DIA + F  ++ KD+ +W
Sbjct: 121 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMW 180

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
             M++     G  K A+++F KM  E   P+ IT  + + AC++  L+  G++
Sbjct: 181 NIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 233


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 293/847 (34%), Positives = 466/847 (55%), Gaps = 24/847 (2%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRT---VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
            MYGKCG    A  +F  ++ R    + +WNAM+ A V  G     +  + R+R+ G+  +
Sbjct: 274  MYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPN 333

Query: 58   AFTFPCVIKACAMLKDLDCGAK--IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            + T   ++ A A    +D GA    HG + + GY     I N++++MYAKC  F  A  +
Sbjct: 334  SVTLITILNALAA-SGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAV 392

Query: 116  FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            F R+  K DV+ WN+++ A        + +  F  M   G+  N  +F+A L AC +S  
Sbjct: 393  FRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEA 452

Query: 176  ETLGMEIHAATVKSGQN-LQVYVANALIAMYARCGKMTEAAGVLYQ--LENKDSVSWNSM 232
               G +IH+  +   ++ ++  VA  L++MY +CG ++EA  V  +  L ++  V+WN M
Sbjct: 453  LDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVM 512

Query: 233  LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE---LHAYAIK 289
            L  + QND   +A     E+   G  PD      A+S +  L +    +E   L    ++
Sbjct: 513  LGAYAQNDRSKEAFGALMEMLQGGVLPD------ALSFTSVLSSCYCSQEAQVLRMCILE 566

Query: 290  QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
             G+ S   +   L+ M+ +C  +     VF +M   D +SWT +++  A+N    +   L
Sbjct: 567  SGYRSAC-LETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNL 625

Query: 350  FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
            FR +QLEG+  D   + + L  C     +   K IH  +   GL +D+ + NA++++Y  
Sbjct: 626  FRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSN 685

Query: 409  CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
            CG+   + + FE+++++D+VSW  M ++Y   GLA EA+ LF  M    V+ D +T  + 
Sbjct: 686  CGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTT 745

Query: 469  LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
            L+ +   +++  GK  +      G + + SVA+ LV +YA+CG LD A  +F       +
Sbjct: 746  LNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTV 805

Query: 529  ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
            +L  ++I A   HG  + A+ +F+KM+ E   PD  T ++++ AC H+G++ EG      
Sbjct: 806  VLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLT 865

Query: 589  MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
            M+  + + P  EHYAC VDLLGRA  LE A Q +R M  E    VW +LLG C++  + E
Sbjct: 866  MKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAE 925

Query: 649  LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
            LGE  A+++LELDP N   +V++SN++ A+ KWKD +  R +M    +K  PG SW EIG
Sbjct: 926  LGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIG 985

Query: 709  NKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHS 768
             ++H F+A D+SH ++DEIY  L ++ E L R  GY A       +VE+E K + L  HS
Sbjct: 986  KQVHEFVAGDRSHPKTDEIYVVLDKL-ELLMRRAGYEADKGL---DVEDELKEKALGYHS 1041

Query: 769  ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
            ER+AIA+G++ +   + ++I KNLRVC DCH+  K +S + GRE++VRD+ RFHHF  G 
Sbjct: 1042 ERIAIAFGLIATPPETTLKIVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGT 1101

Query: 829  CSCGDYW 835
            CSC D W
Sbjct: 1102 CSCKDCW 1108



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 183/660 (27%), Positives = 315/660 (47%), Gaps = 24/660 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSN----GEPLRVLETYSRMRVLGISV 56
           MY KCGS+ DA  +F  + ++ V +W AM GAY        + LR+   +  M +  ++ 
Sbjct: 175 MYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRI---FREMLLQPLAP 231

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           +  TF   + AC  L+D   G  +H L+ +          N+L+ MY KC D+  A  +F
Sbjct: 232 NVITFITALGACTSLRD---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVF 288

Query: 117 DRMGEKE--DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
             M  ++  D+V WN++ISA   +G+  +A+ +FR ++  G+  N+ T +  L A   S 
Sbjct: 289 KAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASG 348

Query: 175 FE-TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSM 232
            +       H    +SG    V + NA+I+MYA+CG  + A  V  ++  K D +SWN+M
Sbjct: 349 VDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTM 408

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI--KQ 290
           L        + K +  F  +  AG  P++V  +  ++A      L  G+++H+  +  ++
Sbjct: 409 LGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRR 468

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--TAQDFISWTTIIAGYAQNNCHLKALE 348
            +V    +   L+ MY KC  ++    VF +M   ++  ++W  ++  YAQN+   +A  
Sbjct: 469 DYVES-SVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFG 527

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGK 408
               +   G+  D +   SVL +C    C  + + +   I+  G     +  A++ ++G+
Sbjct: 528 ALMEMLQGGVLPDALSFTSVLSSC---YCSQEAQVLRMCILESGYRSACLETALISMHGR 584

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           C  ++ +R+VF  ++  DVVSWT+M+S+   N    E   LF  M    V  D  TL + 
Sbjct: 585 CRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATT 644

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           L    + + L  GK ++  +   G   + +V ++L++MY+ CG    A   F  ++ +DL
Sbjct: 645 LDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDL 704

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
           + W  M  A    G  K A+ LF +M+ E   PD +TF   L     S L+++GK F   
Sbjct: 705 VSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLF-HA 763

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           +  +  LD        LV L  +   L+EA    R    + T  +  A++GA   H   E
Sbjct: 764 LAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRG-ACDWTVVLLNAIIGALAQHGFSE 822



 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 174/600 (29%), Positives = 298/600 (49%), Gaps = 27/600 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAF 59
           MY +CGS+ +A  +F K+ +R V +W A++ A    G   R    +  M +    + +++
Sbjct: 69  MYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSY 128

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYD----STDFIVNSLVAMYAKCYDFRKARQL 115
           T   ++ ACA  +DL  G  IH ++ + G +    +   + N+++ MYAKC     A  +
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAV 188

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCL-EALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           F  + EK DVV W ++  AY+   +   +AL +FREM    L  N  TF+ AL AC  +S
Sbjct: 189 FLAIPEK-DVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC--TS 245

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK---DSVSWNS 231
               G  +H+   ++        +NALI MY +CG    A  V   + ++   D VSWN+
Sbjct: 246 LRD-GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNA 304

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV---NAVSASGRLGNLLNGKELHAYAI 288
           M++  V+   +  AM  FR L+  G +P+ V  +   NA++ASG   +    +  H    
Sbjct: 305 MISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGV--DFGAARGFHGRIW 362

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKAL 347
           + G++ D+ IGN ++ MYAKC   +    VF ++  + D ISW T++          K +
Sbjct: 363 ESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVV 422

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDV 405
             F  + L G+D + +   ++L ACS  + +   ++IH  I+  R+   +  +   +V +
Sbjct: 423 NTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSM 482

Query: 406 YGKCGNIDYSRNVFE--SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           YGKCG+I  +  VF+   + S+ +V+W  M+ +Y  N  + EA      M +  V  D++
Sbjct: 483 YGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDAL 542

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           +  S L   SS    ++ + L   I+  G+     + ++L+ M+ RC  L+ A  VFN +
Sbjct: 543 SFTSVL---SSCYCSQEAQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFNEM 598

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
              D++ WT+M++A   +   K   +LF +M+ E   PD  T    L  C  S  +  GK
Sbjct: 599 DHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGK 658



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 181/640 (28%), Positives = 302/640 (47%), Gaps = 39/640 (6%)

Query: 34  VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD 93
           +  G  +R L + S    +  + D   +  ++++C    DL  G   H L+   G +   
Sbjct: 1   MKRGSIIRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHL 60

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM-Q 152
           F+ N L+ MY +C    +A  +F +M E+ +VV W ++ISA +  G    A  LFR M  
Sbjct: 61  FLGNCLINMYVRCGSLEEAHAIFSKM-EERNVVSWTALISANAQCGAFARAFALFRTMLL 119

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG----QNLQVYVANALIAMYARC 208
                 N+YT VA L AC +S    +G  IHA   + G          V NA+I MYA+C
Sbjct: 120 ESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKC 179

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQ-NDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
           G + +A  V   +  KD VSW +M   + Q    Y  A++ FRE+      P+    +  
Sbjct: 180 GSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPN---VITF 236

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-- 325
           ++A G   +L +G  LH+   +     D    N L++MY KC        VF  M ++  
Sbjct: 237 ITALGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQE 296

Query: 326 -DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL--MACSGLKCMSQTK 382
            D +SW  +I+   +   H  A+ +FR ++LEG+  + + + ++L  +A SG+      +
Sbjct: 297 LDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVD-FGAAR 355

Query: 383 EIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISSYVHN 440
             HG I   G L D+VI NAI+ +Y KCG    +  VF  I  K DV+SW +M+ +    
Sbjct: 356 GFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDR 415

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII-RKGFNLEGSV 499
               + +  F+ M  A ++ + ++ ++ L+A S+   L  G++++  I+ R+   +E SV
Sbjct: 416 KSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSV 475

Query: 500 ASSLVDMYARCGALDIANKVFN--CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
           A+ LV MY +CG++  A  VF    + ++ L+ W  M+ A   + R K A     +M   
Sbjct: 476 ATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQG 535

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYAC----LVDLLGRA 612
              PD ++F ++L +C  S    E +   + I+   Y+        AC    L+ + GR 
Sbjct: 536 GVLPDALSFTSVLSSCYCS---QEAQVLRMCILESGYR-------SACLETALISMHGRC 585

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
             LE+A      M        W A++ A     N++  E+
Sbjct: 586 RELEQARSVFNEMDHGDVVS-WTAMVSA--TAENRDFKEV 622


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 292/847 (34%), Positives = 467/847 (55%), Gaps = 24/847 (2%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRT---VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
            MYGKCG    A  +F  ++ R    + +WNAM+ A V  G     +  + R+R+ G+  +
Sbjct: 274  MYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPN 333

Query: 58   AFTFPCVIKACAMLKDLDCGA--KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            + T   ++ A A    +D GA  K HG + + GY     + N++++MYAKC  F  A  +
Sbjct: 334  SVTLITILNALAA-SGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTV 392

Query: 116  FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            F R+  K DV+ WN+++ A        + +  F  M   G+  N  +F+A L AC +S  
Sbjct: 393  FRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEA 452

Query: 176  ETLGMEIHAATVKSGQN-LQVYVANALIAMYARCGKMTEAAGVLYQ--LENKDSVSWNSM 232
               G +IH+  +   ++ ++  VA  L++MY +CG + EA  V  +  L ++  V+WN M
Sbjct: 453  LDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVM 512

Query: 233  LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE---LHAYAIK 289
            L  + QND   +A     E+   G  PD      A+S +  L +    +E   L    ++
Sbjct: 513  LGAYAQNDRSKEAFGALMEMLQGGVLPD------ALSFTSVLSSCYCSQEAQVLRMCILE 566

Query: 290  QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
             G+ S   +   L+ M+ +C  +     VF +M   D +SWT +++  A+N    +   L
Sbjct: 567  SGYRSAC-LETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHL 625

Query: 350  FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
            FR +QLEG+  D   + + L  C     +   K IH  +   GL +D+ + NA++++Y  
Sbjct: 626  FRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSN 685

Query: 409  CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
            CG+   + + FE+++++D+VSW  M ++Y   GLA EA+ LF  M    V+ D +T  + 
Sbjct: 686  CGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTT 745

Query: 469  LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
            L+ +   +++  GK  +G     G + + SVA+ LV +YA+CG LD A  +F       +
Sbjct: 746  LNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTV 805

Query: 529  ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
            +L  ++I A   HG  + A+ +F+KM+ E   PD  T ++++ AC H+G++ EG      
Sbjct: 806  VLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLT 865

Query: 589  MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
            M+  + + P  EHYAC VDLLGRA  LE A Q +R M  E    VW +LLG C++  + E
Sbjct: 866  MKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAE 925

Query: 649  LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
            LGE  A+++LELDP N   +V++SN++ A+ KWKD +  R ++    +K  PG SW+EIG
Sbjct: 926  LGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIG 985

Query: 709  NKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHS 768
             ++H F+A D+SH ++DEIY  L ++ E L R  GY A       + E+E K + L  HS
Sbjct: 986  KQVHEFVAGDRSHPQTDEIYVVLDKL-ELLMRRAGYEADKGL---DAEDELKEKALGYHS 1041

Query: 769  ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
            ER+AIA+G++ +   + ++I KNLRVC DCH+  K +S + GRE++VRD+ RFHHF  G 
Sbjct: 1042 ERIAIAFGLIATPPDTTLKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGT 1101

Query: 829  CSCGDYW 835
            CSC D W
Sbjct: 1102 CSCKDCW 1108



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 174/600 (29%), Positives = 300/600 (50%), Gaps = 27/600 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAF 59
           MY +CGS+ +A  +F K+ +R V +W A++ A   +G   R    +  M +    + +++
Sbjct: 69  MYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSY 128

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYD----STDFIVNSLVAMYAKCYDFRKARQL 115
           T   ++ ACA  +DL  G  IH ++ + G +    +   + N+++ MYAKC     A  +
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAV 188

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCL-EALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           F  + EK DVV W ++  AY+   +   +AL +FREM    L  N  TF+ AL AC  +S
Sbjct: 189 FLTIPEK-DVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC--TS 245

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK---DSVSWNS 231
               G  +H+   ++G        NALI MY +CG    A GV   + ++   D VSWN+
Sbjct: 246 LRD-GTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNA 304

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV---NAVSASGRLGNLLNGKELHAYAI 288
           M++  V+   +  AM  FR L+  G +P+ V  +   NA++ASG   +    ++ H    
Sbjct: 305 MISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGV--DFGAARKFHGRIW 362

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKAL 347
           + G++ D+ +GN ++ MYAKC   +    VF ++  + D ISW T++          K +
Sbjct: 363 ESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVV 422

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDV 405
             F  + L G+D + +   ++L ACS  + +   ++IH  I+  R+   +  +   +V +
Sbjct: 423 NTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSM 482

Query: 406 YGKCGNIDYSRNVFE--SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           YGKCG+I  +  VF+   + S+ +V+W  M+ +Y  N  + EA      M +  V  D++
Sbjct: 483 YGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDAL 542

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           +  S L   SS    ++ + L   I+  G+     + ++L+ M+ RC  L+ A  VF+ +
Sbjct: 543 SFTSVL---SSCYCSQEAQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFDEM 598

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
              D++ WT+M++A   +   K    LF +M+ E   PD  T    L  C  S  +  GK
Sbjct: 599 DHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGK 658



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 161/535 (30%), Positives = 268/535 (50%), Gaps = 21/535 (3%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
           + D   +  ++++C    DL  G + H L+   G +   F+ N L+ MY +C    +A  
Sbjct: 22  AADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHA 81

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDS 173
           +F +M E+ +VV W ++ISA + SG    A  LFR M        N+YT VA L AC +S
Sbjct: 82  IFSKM-EERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANS 140

Query: 174 SFETLGMEIHAATVKSG----QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
               +G  IHA   + G          V NA+I MYA+CG   +A  V   +  KD VSW
Sbjct: 141 RDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSW 200

Query: 230 NSMLTGFVQ-NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
            +M   + Q    Y  A++ FRE+      P+    +  ++A G   +L +G  LH+   
Sbjct: 201 TAMAGAYAQERRFYPDALRIFREMLLQPLAPN---VITFITALGACTSLRDGTWLHSLLH 257

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ---DFISWTTIIAGYAQNNCHLK 345
           + G   D   GN L++MY KC        VF  M ++   D +SW  +I+   +   H  
Sbjct: 258 EAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGD 317

Query: 346 ALELFRTVQLEGLDADVMIIGSVL--MACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAI 402
           A+ +FR ++LEG+  + + + ++L  +A SG+      ++ HG I   G L D+V+ NAI
Sbjct: 318 AMAIFRRLRLEGMRPNSVTLITILNALAASGVD-FGAARKFHGRIWESGYLRDVVVGNAI 376

Query: 403 VDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           + +Y KCG    +  VF  I  K DV+SW +M+ +        + +  F+ M  A ++ +
Sbjct: 377 ISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPN 436

Query: 462 SITLVSALSAASSLSILKKGKELNGFII-RKGFNLEGSVASSLVDMYARCGALDIANKVF 520
            ++ ++ L+A S+   L  G++++  I+ R+   +E SVA+ LV MY +CG++  A  VF
Sbjct: 437 KVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVF 496

Query: 521 N--CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
               + ++ L+ W  M+ A   + R K A     +M      PD ++F ++L +C
Sbjct: 497 KEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC 551



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 253/504 (50%), Gaps = 22/504 (4%)

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
           RV    +   + A LQ+C DS+    G   H     +G    +++ N LI MY RCG + 
Sbjct: 18  RVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLE 77

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE-LQGAGQKPDQVCTVNAVSAS 271
           EA  +  ++E ++ VSW ++++   Q+  + +A   FR  L  +   P+    V  ++A 
Sbjct: 78  EAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNAC 137

Query: 272 GRLGNLLNGKELHAYAIKQGF----VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
               +L  G+ +HA   + G      +   +GN +++MYAKC        VF  +  +D 
Sbjct: 138 ANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDV 197

Query: 328 ISWTTIIAGYAQ-NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
           +SWT +   YAQ    +  AL +FR + L+ L  +V+   + L AC+ L+       +H 
Sbjct: 198 VSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLR---DGTWLHS 254

Query: 387 YIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESK---DVVSWTSMISSYVHNGL 442
            +   GL  D +  NA++++YGKCG+ + +  VF+++ S+   D+VSW +MIS+ V  G 
Sbjct: 255 LLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGR 314

Query: 443 ANEALELFYLMNEANVESDSITLVSALSA-ASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
             +A+ +F  +    +  +S+TL++ L+A A+S       ++ +G I   G+  +  V +
Sbjct: 315 HGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGN 374

Query: 502 SLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           +++ MYA+CG    A  VF  ++ K D+I W +M+ A+         ++ F+ M      
Sbjct: 375 AIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGID 434

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIM---RCDYQLDPWPEHYACLVDLLGRANHLEE 617
           P+ ++F+A+L ACS+S  ++ G+K   ++   R DY           LV + G+   + E
Sbjct: 435 PNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVA---TMLVSMYGKCGSIAE 491

Query: 618 AYQFVRSMQIEPTAEV-WCALLGA 640
           A    + M +   + V W  +LGA
Sbjct: 492 AELVFKEMPLPSRSLVTWNVMLGA 515


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 256/656 (39%), Positives = 408/656 (62%), Gaps = 3/656 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  + +G          LI  YAR G +  A  V  +       +WN+M+  + +  
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  +  +   G +PD       + A  R  +L +G+E    A+ QG+  D+ +G 
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++++YAKC  ++   RVF +M  +D + WTT+I G AQN    +A++++R +  + ++ 
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D +++  ++ AC+ L        IHGY+IRK +  D+++  ++VD+Y K G+++ +  VF
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVF 264

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  K+V+SW+++IS +  NG A  AL+L   M     + DS++LVS L A S +  LK
Sbjct: 265 RRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLK 324

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GK ++G+I+R+  + +   +++++DMY++CG+L  A  VF+ +  +D I W ++I + G
Sbjct: 325 LGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYG 383

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HG G+ A+ LF +M   +  PDH TF +LL A SHSGL+ +G+ +  IM  +Y++ P  
Sbjct: 384 IHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSE 443

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           +HYAC+VDLL RA  +EEA + + SM  EP   +W ALL  C  H    +GE+ AKK+LE
Sbjct: 444 KHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLE 503

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P +PG Y L+SN FA +R+W +V +VR  M+ +G+KK PG S +E+  K+H+F+  DK
Sbjct: 504 LNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDK 563

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH + +EI + L ++  ++ +  GYV +T+FVLHN+EEE K +ML  HSERLAIA+G+L 
Sbjct: 564 SHHQYEEIMQVLGKLDYEM-KAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLN 622

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +  G+ + ITKNLRVC DCH   K +S++  RE+VVRD  RFHHF+ GVCSCGDYW
Sbjct: 623 TGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/475 (32%), Positives = 255/475 (53%), Gaps = 5/475 (1%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           KD    AKIH L++  G          L+  YA+      ARQ+FD+   +  V  WN++
Sbjct: 18  KDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDK-SPQCGVDAWNAM 76

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           I AYS  G   EAL L+  M   G+  ++ T+   L+AC  S     G E     V  G 
Sbjct: 77  IIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGY 136

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
              V+V  A++ +YA+CGKM EA  V  ++  +D V W +M+TG  QN    +A+  +R+
Sbjct: 137 GDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQ 196

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           +     + D V  +  + A   LG+   G  +H Y I++  + D+ +  +L+DMYAK   
Sbjct: 197 MHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGH 256

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           +     VF +M  ++ ISW+ +I+G+AQN     AL+L   +Q  G   D + + SVL+A
Sbjct: 257 LELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLA 316

Query: 372 CSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           CS +  +   K +HGYI+R+   D V   A++D+Y KCG++ ++R VF+ I  +D +SW 
Sbjct: 317 CSQVGFLKLGKSVHGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWN 376

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           ++I+SY  +G   EAL LF  M E NV+ D  T  S LSA S   +++KG+     ++ +
Sbjct: 377 AIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNE 436

Query: 492 GFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR 543
            + ++ S    + +VD+ +R G ++ A ++   + T+  I +W ++++    HG+
Sbjct: 437 -YKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGK 490



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 227/454 (50%), Gaps = 27/454 (5%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +  A Q+FDK  Q  V  WNAM+ AY   G     L  Y RM   G+  D+ T+
Sbjct: 49  YARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTY 108

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+KAC    DL  G +     +  GY    F+  +++ +YAKC    +A ++FD+MG 
Sbjct: 109 TVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMG- 167

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D+V W ++I+  + +GQ  EA+ ++R+M +  +  +    +  +QAC       +G+ 
Sbjct: 168 RRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLS 227

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   ++    + V V  +L+ MYA+ G +  A+ V  ++  K+ +SW+++++GF QN  
Sbjct: 228 IHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGF 287

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
              A+Q   ++Q  G KPD V  V+ + A  ++G L  GK +H Y +++    D      
Sbjct: 288 AGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTA 346

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++DMY+KC  +++   VF Q++ +D ISW  IIA Y  +    +AL LF  ++   +  D
Sbjct: 347 VIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPD 406

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-------------NAIVDVYGK 408
                S+L A S           H  ++ KG     I+               +VD+  +
Sbjct: 407 HATFASLLSAFS-----------HSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSR 455

Query: 409 CGNIDYSRNVFES-IESKDVVSWTSMISSYVHNG 441
            G ++ ++ + ES I    +  W +++S  +++G
Sbjct: 456 AGRVEEAQELIESMITEPGIAIWVALLSGCLNHG 489



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 139/281 (49%), Gaps = 2/281 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + +A ++FDK+ +R +  W  M+     NG+    ++ Y +M    +  D   
Sbjct: 149 LYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVV 208

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I+AC  L     G  IHG +++        +  SLV MYAK      A  +F RM 
Sbjct: 209 MLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRML 268

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +V+ W+++IS ++ +G    AL L  +MQ  G   ++ + V+ L AC    F  LG 
Sbjct: 269 YK-NVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGK 327

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   V+   +     + A+I MY++CG ++ A  V  Q+  +DS+SWN+++  +  + 
Sbjct: 328 SVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHG 386

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
              +A+  F +++    KPD     + +SA    G +  G+
Sbjct: 387 SGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGR 427


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 303/858 (35%), Positives = 490/858 (57%), Gaps = 32/858 (3%)

Query: 1    MYGKC-GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV--- 56
            MYG C  S  DA  +FD++  R   +WN+++  Y   G+ +   + +S M+  G+     
Sbjct: 691  MYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFK 750

Query: 57   -DAFTFPCVIKACAMLKDLDCG----AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
             + +TF  +I A      +D G     ++   V K G+    ++ ++LV+ +A+      
Sbjct: 751  PNEYTFGSLITAAC--SSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDD 808

Query: 112  ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQAC 170
            A+ +F++MG + +VV  N ++       Q   A  +F EM+  VG+  N+ ++V  L A 
Sbjct: 809  AKNIFEQMGVR-NVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGI--NSDSYVVLLSAF 865

Query: 171  EDSSFETL------GMEIHAATVKSGQN-LQVYVANALIAMYARCGKMTEAAGVLYQLEN 223
              S F  L      G E+HA  +++G N  +V + N L+ MYA+ G + +A  V   +  
Sbjct: 866  --SEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVE 923

Query: 224  KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
            KDSVSWNS+++G  QN+    A + F  ++  G  P     ++ +S+   LG ++ G+++
Sbjct: 924  KDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQI 983

Query: 284  HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
            H   +K G  +D+ + N L+ +YA+  C     +VF  M   D +SW ++I   + +   
Sbjct: 984  HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEAS 1043

Query: 344  L-KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNA 401
            + +A++ F  +   G     +   ++L A S L     + +IH  +++  LSD   I NA
Sbjct: 1044 VSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNA 1103

Query: 402  IVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
            ++  YGKCG ++    +F  + E++D VSW SMIS Y+HN L ++A++L + M +     
Sbjct: 1104 LLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRL 1163

Query: 461  DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
            DS T  + LSA +S++ L++G E++   IR     +  V S+LVDMY++CG +D A++ F
Sbjct: 1164 DSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFF 1223

Query: 521  NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI-TFLALLYACSHSGLI 579
              +  +++  W SMI+    HG G+ A+ LF +M  +   PDH+   L +L ACSH G +
Sbjct: 1224 ELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFV 1283

Query: 580  NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
             EG +  + M   Y+L P  EH++C+VDLLGRA  L+E   F+ SM ++P   +W  +LG
Sbjct: 1284 EEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLG 1343

Query: 640  A-CRVHS-NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
            A CR +  N ELG   A+ LLEL+P N  NYVL++N++A+  KW+DV + R  M+ + +K
Sbjct: 1344 ACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVK 1403

Query: 698  KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
            K  G SW+ + + +H F+A DK H E D IY KL E+  K+ R+ GY+ QT++ L ++E 
Sbjct: 1404 KEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKM-RDAGYIPQTKYALFDLEL 1462

Query: 758  EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
            E K ++L  HSE++A+A+ VL       IRI KNLRVC DCHS    +S++ GR++V+RD
Sbjct: 1463 ENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRD 1521

Query: 818  ANRFHHFEAGVCSCGDYW 835
            +NRFHHFE G CSCGDYW
Sbjct: 1522 SNRFHHFEDGKCSCGDYW 1539



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 192/687 (27%), Positives = 334/687 (48%), Gaps = 25/687 (3%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +Y + G +  A++LFD++S R + TW  ++  Y  NG+P      +  M   G   + + 
Sbjct: 588  IYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYA 647

Query: 61   FPCVIKACAMLKDLDC--GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-FRKARQLFD 117
            F   ++AC       C  G +IHGL+ K  Y S   + N L++MY  C D    AR +FD
Sbjct: 648  FGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFD 707

Query: 118  RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL----VTNAYTFVAALQ-ACED 172
            R+G +  +  WNSIIS YS  G  + A  LF  MQ+ GL      N YTF + +  AC  
Sbjct: 708  RIGIRNSIS-WNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSS 766

Query: 173  SSFETLGMEIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
              F    +E   A V KSG    +YV +AL++ +AR G   +A  +  Q+  ++ VS N 
Sbjct: 767  VDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNG 826

Query: 232  MLTGFVQNDLYCKAMQFFRELQG-AGQKPDQ-VCTVNAVSASGRLGN-LLNGKELHAYAI 288
            ++ G V+      A + F E++   G   D  V  ++A S    L      G+E+HA+ I
Sbjct: 827  LMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVI 886

Query: 289  KQGFVSD-LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
            + G   + + IGN L++MYAK   +     VF  M  +D +SW ++I+G  QN C   A 
Sbjct: 887  RTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA 946

Query: 348  ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVY 406
            E F  ++  G       + S L +C+ L  +   ++IH   ++ GL +D+ + NA++ +Y
Sbjct: 947  ESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALY 1006

Query: 407  GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN-GLANEALELFYLMNEANVESDSITL 465
             + G       VF  +   D VSW S+I +   +    ++A++ F  M         +T 
Sbjct: 1007 AETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTF 1066

Query: 466  VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF-NCVQ 524
            ++ LSA SSLS+ +   +++  +++   + + ++ ++L+  Y +CG ++   K+F    +
Sbjct: 1067 INILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSE 1126

Query: 525  TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            T+D + W SMI+    +     A+DL + M  +    D  TF  +L AC+    +  G  
Sbjct: 1127 TRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERG-- 1184

Query: 585  FLEIMRCDYQ--LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
             +E+  C  +  ++      + LVD+  +   ++ A +F   M +      W +++    
Sbjct: 1185 -MEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYA 1242

Query: 643  VHSNKELGEIVAKKLLELDPGNPGNYV 669
             H + E    +  +++ LD G P ++V
Sbjct: 1243 RHGHGEKALKLFTRMM-LD-GQPPDHV 1267



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 264/514 (51%), Gaps = 22/514 (4%)

Query: 79   KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
            ++H   +K G+    F+ N+L+ +Y +  D   A++LFD M  + ++V W  +IS Y+ +
Sbjct: 565  ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNR-NLVTWACLISGYTQN 623

Query: 139  GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE--TLGMEIHAATVKSGQNLQVY 196
            G+  EA   FR+M R G + N Y F +AL+AC++S      LG++IH    K+     V 
Sbjct: 624  GKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVV 683

Query: 197  VANALIAMYARC-GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
            V N LI+MY  C     +A  V  ++  ++S+SWNS+++ + +      A   F  +Q  
Sbjct: 684  VCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKE 743

Query: 256  GQ----KPDQVC---TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
            G     KP++      + A  +S   G L   +++ A   K GF+ DL +G+ L+  +A+
Sbjct: 744  GLGFSFKPNEYTFGSLITAACSSVDFG-LCVLEQMLARVEKSGFLQDLYVGSALVSGFAR 802

Query: 309  CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-LEGLDADVMIIGS 367
                +    +F QM  ++ +S   ++ G  +      A ++F  ++ L G+++D  ++  
Sbjct: 803  FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV-- 860

Query: 368  VLMACSGLKCMSQ----TKEIHGYIIRKGLSD--LVILNAIVDVYGKCGNIDYSRNVFES 421
            +L A S    + +     +E+H ++IR GL+D  + I N +V++Y K G I  + +VFE 
Sbjct: 861  LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFEL 920

Query: 422  IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
            +  KD VSW S+IS    N  + +A E F  M        + TL+S LS+ +SL  +  G
Sbjct: 921  MVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLG 980

Query: 482  KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA-NGL 540
            ++++   ++ G + + SV+++L+ +YA  G      KVF+ +   D + W S+I A +  
Sbjct: 981  EQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDS 1040

Query: 541  HGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
                  A+  F +M    +    +TF+ +L A S
Sbjct: 1041 EASVSQAVKYFLEMMRGGWGLSRVTFINILSAVS 1074



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 231/454 (50%), Gaps = 24/454 (5%)

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           L +++ TF + +   + S       E+H  ++K G    ++++N LI +Y R G +  A 
Sbjct: 540 LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 599

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA---SG 272
            +  ++ N++ V+W  +++G+ QN    +A   FR++  AG  P+     +A+ A   SG
Sbjct: 600 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC-CVNYMGRVFYQMTAQDFISWT 331
             G  L G ++H    K  + SD+ + N L+ MY  C    N    VF ++  ++ ISW 
Sbjct: 660 PSGCKL-GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWN 718

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGL----DADVMIIGSVLM-ACSGLKC-MSQTKEIH 385
           +II+ Y++    + A +LF ++Q EGL      +    GS++  ACS +   +   +++ 
Sbjct: 719 SIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQML 778

Query: 386 GYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
             + + G L DL + +A+V  + + G  D ++N+FE +  ++VVS   ++   V      
Sbjct: 779 ARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGE 838

Query: 445 EALELFYLMNE-ANVESDSITLVSALSAASSLSIL----KKGKELNGFIIRKGFNLEG-S 498
            A ++F+ M +   + SDS  ++  LSA S  S+L    +KG+E++  +IR G N    +
Sbjct: 839 AAAKVFHEMKDLVGINSDSYVVL--LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVA 896

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           + + LV+MYA+ GA+  A  VF  +  KD + W S+I+    +   + A + F +M    
Sbjct: 897 IGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTG 956

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
             P + T ++ L +C+  G I  G    E + CD
Sbjct: 957 SMPSNFTLISTLSSCASLGWIMLG----EQIHCD 986



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 173/346 (50%), Gaps = 29/346 (8%)

Query: 263 CTVNAVSASGRLGNLLN----------GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           C     S+S    +L+N           +ELH  +IK GFV +L + NTL+++Y +   +
Sbjct: 536 CNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDL 595

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
               ++F +M+ ++ ++W  +I+GY QN    +A   FR +   G   +    GS L AC
Sbjct: 596 GSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 655

Query: 373 --SGLKCMSQTKEIHGYI--IRKGLSDLVILNAIVDVYGKC-GNIDYSRNVFESIESKDV 427
             SG        +IHG I   R G SD+V+ N ++ +YG C  + + +R+VF+ I  ++ 
Sbjct: 656 QESGPSGCKLGVQIHGLISKTRYG-SDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNS 714

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANV----ESDSITLVSALSAASS-----LSIL 478
           +SW S+IS Y   G    A +LF  M +  +    + +  T  S ++AA S     L +L
Sbjct: 715 ISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVL 774

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
              +++   + + GF  +  V S+LV  +AR G  D A  +F  +  ++++    ++   
Sbjct: 775 ---EQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGL 831

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
               +G+ A  +F++M+ +    +  +++ LL A S   ++ EG++
Sbjct: 832 VKQKQGEAAAKVFHEMK-DLVGINSDSYVVLLSAFSEFSVLEEGRR 876


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/658 (39%), Positives = 405/658 (61%), Gaps = 7/658 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  V SG     ++    +      G++  A  V  +        WN+++ G+  ++
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  A++ +  +Q +G  PD       + A   +  L  GK +H    + GF SD+ + N
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ +YAKC  V     VF  +  ++ +SWT++I+GY QN   ++AL +F  ++   +  
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYSRN 417
           D + + SVL A + ++ + Q K IHG +++ GL    DL+I  ++  +Y KCG +  +R+
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLI--SLTAMYAKCGQVMVARS 326

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            F+ +E  +V+ W +MIS Y  NG  NEA+ LF  M   N+ +DSIT+ SA+ A + +  
Sbjct: 327 FFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGS 386

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L   K +  +I +  +  +  V ++L+DM+A+CG++D+A +VF+    KD+++W++MI  
Sbjct: 387 LDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVG 446

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            GLHGRG+ AIDLFY M+     P+ +TF+ LL AC+HSGL+ EG +    M+  Y ++ 
Sbjct: 447 YGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGIEA 505

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             +HYAC+VDLLGR+ HL EAY F+ +M IEP   VW ALLGAC+++ +  LGE  A++L
Sbjct: 506 RHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQL 565

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
             LDP N G+YV +SN++A+SR W  V +VR+ MR  GL K  G S IEI  K+ +F   
Sbjct: 566 FSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVG 625

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           DKSH    EI+++L  +  +L +E G++   + VLH++ +EEK + L  HSERLAIAYG+
Sbjct: 626 DKSHPRFKEIFEELESLERRL-KEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGL 684

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +  G+ +RITKNLR C++CHS  KL+S+L  RE+VVRDANRFHHF+ GVCSC DYW
Sbjct: 685 ISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 270/529 (51%), Gaps = 16/529 (3%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G   D+F F  ++      + L+   +IH  ++  G   + F+V   V       +   A
Sbjct: 67  GFDFDSF-FSSLLDHSVHKRHLN---QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYA 122

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           R++FD   E   V LWN+II  YS+     +A+ ++  MQ  G+  + +T    L+AC  
Sbjct: 123 RKVFDEFPEPS-VFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSG 181

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
                +G  +H    + G    V+V N L+A+YA+CG++ +A  V   L++++ VSW SM
Sbjct: 182 VPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSM 241

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG- 291
           ++G+ QN L  +A++ F +++    KPD +  V+ + A   + +L  GK +H   +K G 
Sbjct: 242 ISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGL 301

Query: 292 -FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
            F  DL I  +L  MYAKC  V      F QM   + + W  +I+GYA+N    +A+ LF
Sbjct: 302 EFEPDLLI--SLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLF 359

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKC 409
           + +  + +  D + + S ++AC+ +  +   K +  YI +    + V +N A++D++ KC
Sbjct: 360 QEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKC 419

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G++D +R VF+    KDVV W++MI  Y  +G   +A++LFY M +A V  + +T V  L
Sbjct: 420 GSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLL 479

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           +A +   ++++G EL   +   G        + +VD+  R G L+ A      +  +  +
Sbjct: 480 TACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGV 539

Query: 530 -LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            +W +++ A  ++     G+ A +  + ++   F   H   L+ LYA S
Sbjct: 540 SVWGALLGACKIYRHVTLGEYAAEQLFSLDP--FNTGHYVQLSNLYASS 586



 Score =  222 bits (565), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 273/521 (52%), Gaps = 18/521 (3%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A ++FD+  + +VF WNA++  Y S+      +E YSRM+  G++ D FT PCV+
Sbjct: 117 GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVL 176

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KAC+ +  L+ G ++HG + + G++S  F+ N LVA+YAKC    +AR +F+ + ++ ++
Sbjct: 177 KACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDR-NI 235

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V W S+IS Y  +G  +EAL +F +M++  +  +    V+ L+A  D      G  IH  
Sbjct: 236 VSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGC 295

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
            VK G   +  +  +L AMYA+CG++  A     Q+E  + + WN+M++G+ +N    +A
Sbjct: 296 VVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEA 355

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           +  F+E+     + D +   +A+ A  ++G+L   K +  Y  K  + +D+ +   L+DM
Sbjct: 356 VGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDM 415

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL-DADVMI 364
           +AKC  V+    VF +   +D + W+ +I GY  +     A++LF  ++  G+   DV  
Sbjct: 416 FAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTF 475

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVFESIE 423
           +G +L AC+    + +  E+   +   G+       A +VD+ G+ G+++ + +   ++ 
Sbjct: 476 VG-LLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMP 534

Query: 424 SKDVVS-WTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL--SI 477
            +  VS W +++ +   Y H  L   A E  + ++  N  +     +S L A+S L  S+
Sbjct: 535 IEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFN--TGHYVQLSNLYASSRLWDSV 592

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
            K        I+ +   L   +  SL+++  +  A  + +K
Sbjct: 593 AKVR------ILMREKGLSKDLGYSLIEINGKLQAFRVGDK 627



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 177/355 (49%), Gaps = 10/355 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  +F+ +  R + +W +M+  Y  NG P+  L  + +MR   +  D   
Sbjct: 213 LYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIA 272

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++A   ++DL+ G  IHG V+K G +    ++ SL AMYAKC     AR  FD+M 
Sbjct: 273 LVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQM- 331

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  +V++WN++IS Y+ +G   EA+GLF+EM    + T++ T  +A+ AC       L  
Sbjct: 332 EIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAK 391

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +     K+     V+V  ALI M+A+CG +  A  V  +  +KD V W++M+ G+  + 
Sbjct: 392 WMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHG 451

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+  F  ++ AG  P+ V  V  ++A    G +  G EL       G  +  Q   
Sbjct: 452 RGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQ--- 508

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
                YA  C V+ +GR  +   A DFI+   I  G +     L A +++R V L
Sbjct: 509 ----HYA--CVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTL 557


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 280/783 (35%), Positives = 444/783 (56%), Gaps = 5/783 (0%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKAR 113
           +D++    +++ C    D   G  +H  V++ G       F  N L+ +YAK      AR
Sbjct: 45  LDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAAR 104

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           +LFD M E+ ++V + +++  Y+  G   EA GLFR +QR G   N +     L+     
Sbjct: 105 RLFDGMPER-NMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
               L   IHA   K G +   +V ++LI  Y+ CG ++ A  V   +  KD+V+W +M+
Sbjct: 164 DAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           + + +ND+   A+  F +++ AG KP+     + + A+  L + + GK +H  A+K    
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCD 283

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           ++  +G  L+DMYAKC  +     VF  +   D I W+ +I+ YAQ+  + +A E+F  +
Sbjct: 284 TEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRM 343

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
               +  +   +  VL AC+ +  +   ++IH  +I+ G  S+L + NA++DVY KC N+
Sbjct: 344 MRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNM 403

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + S  +F S+   + VSW ++I  Y  +G A +AL +F  M  A+V S  +T  S L A 
Sbjct: 404 ENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRAC 463

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           ++ + +K   +++  I +  FN +  V +SL+D YA+CG +  A KVF  +   D++ W 
Sbjct: 464 ANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWN 523

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           ++I+   LHGR   A++LF +M      P+ +TF+ALL  C  +GL+N+G      M  D
Sbjct: 524 AIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMD 583

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
           +++ P  +HY C+V LLGRA  L +A +F+  +   P+  VW ALL +C VH N  LG+ 
Sbjct: 584 HRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKF 643

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
            A+K+LE++P +   YVL+SN++AA+     V  +R  MR  G+KK  G SW+EI  ++H
Sbjct: 644 SAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVH 703

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLA 772
           +F      H +   I   L  +  K  RE GYV     VLH+V+EEEK +ML+ HSERLA
Sbjct: 704 AFSVGSADHPDMRIINAMLEWLNLKASRE-GYVPDINVVLHDVDEEEKARMLWVHSERLA 762

Query: 773 IAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           +AYG+  +  G  IRI KNLR C+DCH+  K++S++  RE+VVRD NRFHHF+ G+CSCG
Sbjct: 763 LAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCG 822

Query: 833 DYW 835
           DYW
Sbjct: 823 DYW 825



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 163/594 (27%), Positives = 293/594 (49%), Gaps = 7/594 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G +  A +LFD + +R + ++  ++  Y   G        + R++  G  V+ F 
Sbjct: 93  LYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFV 152

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++K    +        IH    K G+D   F+ +SL+  Y+ C     AR +FD + 
Sbjct: 153 LTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGII 212

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V W +++S YS +    +AL  F +M+  G   N +   + L+A    S   LG 
Sbjct: 213 WK-DAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGK 271

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   VK+  + + +V  AL+ MYA+CG + +A  V   + + D + W+ +++ + Q+ 
Sbjct: 272 GIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSY 331

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A + F  +  +   P++      + A   +  L  G+++H   IK G+ S+L +GN
Sbjct: 332 QNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGN 391

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LMD+YAKC  +     +F  +   + +SW TII GY Q+     AL +F+ ++   + +
Sbjct: 392 ALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLS 451

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
             +   SVL AC+    +  T +IH  I +    +D ++ N+++D Y KCG I  +  VF
Sbjct: 452 TQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVF 511

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           ESI   DVVSW ++IS Y  +G A +ALELF  MN+++ + + +T V+ LS   S  ++ 
Sbjct: 512 ESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVN 571

Query: 480 KGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANK-VFNCVQTKDLILWTSMINA 537
           +G  L N   +           + +V +  R G L+ A K + +   T   ++W +++++
Sbjct: 572 QGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSS 631

Query: 538 NGLHGRGKVAIDLFYKMEAESFAP-DHITFLALLYACSHSGLINEGKKFLEIMR 590
             +H    VA+  F   +     P D  T++ L    + +G++++     + MR
Sbjct: 632 CVVH--KNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMR 683


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 286/823 (34%), Positives = 462/823 (56%), Gaps = 5/823 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YG  G VL+A++LF ++ QR V +W A++ A  SNG     L  Y RMR  G+  +A  
Sbjct: 88  LYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANA 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+  C  L+D   G ++   V+  G  +   + NSL+ M+      + A +LFDRM 
Sbjct: 148 LATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRM- 206

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D + WN++IS YS      +   +  +M+   +  +  T  + +  C  S    LG 
Sbjct: 207 EERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGS 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH+  V SG +  V + NAL+ MY+  GK+ EA  +   +  +D +SWN+M++ +VQ++
Sbjct: 267 GIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSN 326

Query: 241 LYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +A++   +L Q     P+ +   +A+ A      L+NG+ +HA  +++   + L IG
Sbjct: 327 SCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIG 386

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+ MY+KC  +    RVF  M   D +S   +  GYA       A+ +F  ++  G+ 
Sbjct: 387 NSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIK 446

Query: 360 ADVMIIGSVLMACSGLKCM-SQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
            + + + ++   C  L  + S    +H Y+ + GL SD  I N+++ +Y  CG+++ S  
Sbjct: 447 PNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTG 506

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  I +K V+SW ++I++ V +G   EA++LF     A  + D   L   LS++++L+ 
Sbjct: 507 IFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLAS 566

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L++G +L+G  ++ G + +  V ++ +DMY +CG +D   K       +    W ++I+ 
Sbjct: 567 LEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISG 626

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              +G  K A D F  M +    PD++TF+ALL ACSH+GLI++G  +   M   + + P
Sbjct: 627 YARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSP 686

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             +H  C+VDLLGR     EA +F+  M + P   +W +LL + R H N ++G   AK L
Sbjct: 687 GIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNL 746

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           LELDP +   YVL+SN++A + +W DV+++R  M+   L K P  SW+++ N++ +F   
Sbjct: 747 LELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIG 806

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D+SH  +++IY KL EI  KL RE GYVA T   LH+ +EE+K   L+ HSE+LA+AYG+
Sbjct: 807 DRSHMHAEKIYVKLDEILLKL-REVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGL 865

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANR 820
           L   EGS IRI KNLRVC DCH   KLVS +F RE+V+RD  R
Sbjct: 866 LVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYR 908



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 172/665 (25%), Positives = 309/665 (46%), Gaps = 44/665 (6%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKAC---AMLKDL 74
           +  RT  +W   +      G           MR   + +  F    ++ AC      +  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 75  DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
            CGA IH L  + G     +I  +L+ +Y        A++LF  M ++ +VV W +I+ A
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQR-NVVSWTAIMVA 119

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
            S++G   EAL  +R M++ G++ NA      +  C     E  G+++ A  V SG    
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V VAN+LI M+    ++ +A  +  ++E +D +SWN+M++ +   ++Y K      +++ 
Sbjct: 180 VSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH 239

Query: 255 AGQKPD--QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
              KPD   +C++ +V AS  L  L  G  +H+  +  G    + + N L++MY+    +
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVAL--GSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE-LFRTVQLEGLDADVMIIGSVLMA 371
           +    +F  M+ +D ISW T+I+ Y Q+N  ++ALE L + +Q +    + M   S L A
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 372 CSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           CS  + +   + IH  I+++ L + L+I N+++ +Y KC +++ +  VFES+   DVVS 
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC 417

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK-GKELNGFII 489
             +   Y        A+ +F  M    ++ + IT+++      SL  L   G  L+ ++ 
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVT 477

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           + G   +  + +SL+ MYA CG L+ +  +F+ +  K +I W ++I AN  HGRG+ AI 
Sbjct: 478 QTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIK 537

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI--------------------- 588
           LF   +      D       L + ++   + EG +   +                     
Sbjct: 538 LFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYG 597

Query: 589 ----MRCDYQLDPWPEH-----YACLVDLLGRANHLEEA---YQFVRSMQIEPTAEVWCA 636
               M C  +  P P H     +  L+    R  + +EA   ++ + S+  +P    + A
Sbjct: 598 KCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVA 657

Query: 637 LLGAC 641
           LL AC
Sbjct: 658 LLSAC 662


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 290/851 (34%), Positives = 467/851 (54%), Gaps = 29/851 (3%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A+QLFD    R V +W+A++ AY   G   +    + +M   G+  + F+   ++K    
Sbjct: 74  AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-DVVLWN 129
             ++    ++HG  ++ G+     I  + + MY++C     A+++FD       D++LWN
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           SII+AY   G  +E L LF +M  VG+V     T+ + + AC  S  E  G  +H   +K
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
           +G      + N+L+  Y +CG +  A+ +  ++  KD VSWN+M+    Q      A+  
Sbjct: 254 AGLE-ATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGL 312

Query: 249 FRELQGAGQ--KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
           FR +       +P++V  ++ +SA   L  L  G+E+HA+  +     D  I N+L+  Y
Sbjct: 313 FRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFY 372

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD----V 362
           +KC  V     +F ++  +D ISW +++AGY QN    +  ++F+ + L G++ D     
Sbjct: 373 SKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLT 432

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRK---GLSDLVILNAIVDVYGKCGNIDYSRNVF 419
           +I  +     SGL    + KEIHGYI+R+   G   L + NAI+ +Y K   I  +  +F
Sbjct: 433 IIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIF 492

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + ++++D  SW +M+  Y  N    + L +F  + +     D ++L   L++   L  L+
Sbjct: 493 KGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQ 552

Query: 480 KGKELNGFIIRKGFNLEG--------SVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            GK+ +  ++ K FN +         S+ ++L+ MY++CG++  A +VF  ++ KD+  W
Sbjct: 553 LGKQFHA-VVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSW 611

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
           T+MI     HG    A+ LF +M+ +   P+ +TFLALL AC+H GL+ EG  + + M  
Sbjct: 612 TAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYN 671

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS--MQIEPTAE----VWCALLGACRVHS 645
           DY L P  EHYAC++DL GR+   + A   V       +P  +    +W  LLGAC    
Sbjct: 672 DYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASK 731

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
             +LG   A K+LEL+P +   Y+L++N++A+S  W+D  +VR  MR  GL+K  G SWI
Sbjct: 732 QLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWI 791

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
           + GN+ H F+A D  H +  EIY+KLA++     R  GYV  T+ VLH+V+E EK  +L 
Sbjct: 792 DTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRM-GYVPMTELVLHDVDETEKEAILG 850

Query: 766 GHSERLAIAYGVLKSTEGS-LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHF 824
            HSE+LA+++G+L    G+ +IR+ KNLRVC DCHS+ K  S L  RE+++RD+ RFH F
Sbjct: 851 CHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKREILLRDSQRFHLF 910

Query: 825 EAGVCSCGDYW 835
             G CSCGDYW
Sbjct: 911 RDGSCSCGDYW 921



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 181/619 (29%), Positives = 311/619 (50%), Gaps = 34/619 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVS--QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVD 57
           MY +CG + DA+++FD+ S     +  WN+++ AY+ +G  + VL  + +M  +G ++  
Sbjct: 165 MYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPT 224

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             T+  V+ AC    +   GA +HG ++K G ++T+ + NSLV  Y KC + + A QLF+
Sbjct: 225 ELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFE 283

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV--GLVTNAYTFVAALQACEDSSF 175
           R+  K DVV WN++I+A    G+   ALGLFR M +V   +  N  TF++ L A    S 
Sbjct: 284 RISRK-DVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSA 342

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G EIHA   +    +   + N+LI  Y++C ++ +A  +  +L  +D +SWNSML G
Sbjct: 343 LRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAG 402

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL----NGKELHAYAIKQ- 290
           + QN+   +    F+ +  +G +PD        +A+ R  + L     GKE+H Y +++ 
Sbjct: 403 YEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRI 462

Query: 291 --GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
             G VS L + N ++ MYAK   +    ++F  M  +D  SW  ++ GY++N      L 
Sbjct: 463 TPGGVS-LSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLM 521

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--------KGLSDLVILN 400
           +F  +  +G   D + +  +L +C  L  +   K+ H  + +           S L I N
Sbjct: 522 IFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINN 581

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A++ +Y KCG+I  +  VF  +E KDV SWT+MI+   H+GLA EAL+LF  M    ++ 
Sbjct: 582 ALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKP 641

Query: 461 DSITLVSALSAASSLSILKKGK-ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK- 518
           + +T ++ L A +   ++++G    +      G +      + ++D++ R G  D A   
Sbjct: 642 NQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSL 701

Query: 519 ------VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP-DHITFLALLY 571
                 +F       L LW  ++ A   H   ++ + +    +     P D  T++ L  
Sbjct: 702 VEFGITLFKPYHDDILNLWKVLLGA--CHASKQLDLGVEAATKILELEPEDEATYILLAN 759

Query: 572 ACSHSGLINEGKKFLEIMR 590
             + SGL  +  K  + MR
Sbjct: 760 LYASSGLWEDAIKVRKAMR 778


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 300/851 (35%), Positives = 487/851 (57%), Gaps = 19/851 (2%)

Query: 1   MYGKC-GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KC GSV  A   F  +  +   +WN+++  Y   G+       +S M+  G     +
Sbjct: 148 MYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEY 207

Query: 60  TF-PCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           TF   V  AC++ + D+    +I   + K G  +  F+ + LV+ +AK      AR++F+
Sbjct: 208 TFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFN 267

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF-E 176
           +M E  + V  N ++          EA  LF +M  + +  +  ++V  L +  + S  E
Sbjct: 268 QM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAE 325

Query: 177 TLGM----EIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            +G+    E+H   + +G  +  V + N L+ MYA+CG + +A  V Y + +KDSVSWNS
Sbjct: 326 EVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNS 385

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M+TG  QN  + +A++ ++ ++     P     ++++S+   L     G+++H  ++K G
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL-KALELF 350
              ++ + N LM +YA+   +N   ++F  M   D +SW +II   A++   L +A+  F
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKC 409
              Q  G   + +   SVL A S L      K+IHG  ++  ++D     NA++  YGKC
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKC 565

Query: 410 GNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           G +D    +F  + E +D V+W SMIS Y+HN L  +AL+L + M +     DS    + 
Sbjct: 566 GEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           LSA +S++ L++G E++   +R     +  V S+LVDMY++CG LD A + FN +  ++ 
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACSHSGLINEGKKFLE 587
             W SMI+    HG+G+ A+ LF  M+ +    PDH+TF+ +L ACSH+GL+ EG K  E
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 745

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA-CRVHSN 646
            M   Y L P  EH++C+ D+LGRA  L++   F+  M ++P   +W  +LGA CR +  
Sbjct: 746 SMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGR 805

Query: 647 K-ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           K ELG+  A+ L +L+P N  NYVL+ N++AA  +W+D+ + R +M+ + +KK  G SW+
Sbjct: 806 KAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
            + + +H F+A DKSH ++D IYKKL E+  K+ R+ GYV QT F L+++E+E K ++L 
Sbjct: 866 TMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM-RDAGYVPQTGFALYDLEQENKEEILS 924

Query: 766 GHSERLAIAYGVLKSTEGSL-IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHF 824
            HSE+LA+A+ +      +L IRI KNLRVC DCHS  K +S++ GR++++RD+NRFHHF
Sbjct: 925 YHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHF 984

Query: 825 EAGVCSCGDYW 835
           + G CSC D+W
Sbjct: 985 QDGACSCSDFW 995



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 192/695 (27%), Positives = 338/695 (48%), Gaps = 29/695 (4%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G  + A ++FD++  R   +W  ++  Y  NGE    L     M   GI  + + F
Sbjct: 46  YLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAF 105

Query: 62  PCVIKACAMLKDLDC--GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY-DFRKARQLFDR 118
             V++AC  +  +    G +IHGL+ K  Y     + N L++MY KC      A   F  
Sbjct: 106 VSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGD 165

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL-QACEDSSFET 177
           + E ++ V WNSIIS YS +G    A  +F  MQ  G     YTF + +  AC  +  + 
Sbjct: 166 I-EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV 224

Query: 178 LGMEIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             +E    T+ KSG    ++V + L++ +A+ G ++ A  V  Q+E +++V+ N ++ G 
Sbjct: 225 RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284

Query: 237 VQNDLYCKAMQFFRELQGA-GQKPDQ----VCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           V+     +A + F ++       P+     + +    S +  +G L  G+E+H + I  G
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTG 343

Query: 292 FVSDL-QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
            V  +  IGN L++MYAKC  +    RVFY MT +D +SW ++I G  QN C ++A+E +
Sbjct: 344 LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERY 403

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
           ++++   +      + S L +C+ LK     ++IHG  ++ G+  ++ + NA++ +Y + 
Sbjct: 404 KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA-NEALELFYLMNEANVESDSITLVSA 468
           G ++  R +F S+   D VSW S+I +   +  +  EA+  F     A  + + IT  S 
Sbjct: 464 GYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSV 523

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN-CVQTKD 527
           LSA SSLS  + GK+++G  ++     E +  ++L+  Y +CG +D   K+F+   + +D
Sbjct: 524 LSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRD 583

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
            + W SMI+    +     A+DL + M       D   +  +L A +    +  G   +E
Sbjct: 584 NVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG---ME 640

Query: 588 IMRCDYQ--LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
           +  C  +  L+      + LVD+  +   L+ A +F  +M +  +   W +++     H 
Sbjct: 641 VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHG 699

Query: 646 NKELGEIVAKKLLE---LDPGNPGNYVLISNVFAA 677
             E     A KL E   LD   P ++V    V +A
Sbjct: 700 QGE----EALKLFETMKLDGQTPPDHVTFVGVLSA 730



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 253/479 (52%), Gaps = 32/479 (6%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
            H  + K   D   ++ N+L+  Y +  D   AR++FD M  + + V W  I+S YS +G
Sbjct: 23  FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR-NCVSWACIVSGYSRNG 81

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACED--SSFETLGMEIHAATVKSGQNLQVYV 197
           +  EAL   R+M + G+ +N Y FV+ L+AC++  S     G +IH    K    +   V
Sbjct: 82  EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141

Query: 198 ANALIAMYARC-GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           +N LI+MY +C G +  A      +E K+SVSWNS+++ + Q      A + F  +Q  G
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201

Query: 257 QKPDQVCTVNAVSASGRL--GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            +P +    + V+ +  L   ++   +++     K G ++DL +G+ L+  +AK   ++Y
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSY 261

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS----VLM 370
             +VF QM  ++ ++   ++ G  +     +A +LF       +D + MI  S    V++
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF-------MDMNSMIDVSPESYVIL 314

Query: 371 ACS----------GLKCMSQTKEIHGYIIRKGLSDLV--ILNAIVDVYGKCGNIDYSRNV 418
             S          GLK   + +E+HG++I  GL D +  I N +V++Y KCG+I  +R V
Sbjct: 315 LSSFPEYSLAEEVGLK---KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  +  KD VSW SMI+    NG   EA+E +  M   ++   S TL+S+LS+ +SL   
Sbjct: 372 FYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           K G++++G  ++ G +L  SV+++L+ +YA  G L+   K+F+ +   D + W S+I A
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 297/801 (37%), Positives = 458/801 (57%), Gaps = 51/801 (6%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H   +K G+    F+ N+L+ +Y +  D   A++LFD M  + ++V W  +IS Y+ +
Sbjct: 120 ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNR-NLVTWACLISGYTQN 178

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE--TLGMEIHAATVKSGQNLQVY 196
           G+  EA   FR+M R G + N Y F +AL+AC++S      LG++IH    K+     V 
Sbjct: 179 GKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVV 238

Query: 197 VANALIAMYARC-GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           V N LI+MY  C     +A  V   +  ++S+SWNS+++ + +      A   F  +Q  
Sbjct: 239 VCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKE 298

Query: 256 GQ----KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD-LQIGNTLMDMYAKCC 310
           G     KP+   +  +V   GR      G+E+HA+ I+ G   + + IGN L++MYAK  
Sbjct: 299 GLGFSFKPNDAFSEFSVLEEGRR----KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSG 354

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-------------LEG 357
            +     VF  M  +D +SW ++I+G  QN C   A E+F  +              L  
Sbjct: 355 AIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSD 414

Query: 358 LDADV---------MIIG----------SVLMACSGLKCMSQTKEIHGYIIRKGLSD-LV 397
            +A V         M+ G          ++L A S L     + +IH  +++  LSD   
Sbjct: 415 SEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTA 474

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           I NA++  YGKCG ++    +F  + E++D VSW SMIS Y+HN L ++A++L + M + 
Sbjct: 475 IGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQK 534

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
               DS T  + LSA +S++ L++G E++   IR     +  V S+LVDMY++CG +D A
Sbjct: 535 GQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYA 594

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
           ++ F  +  +++  W SMI+    HG G+ A+ LF +M  +   PDH+TF+ +L ACSH 
Sbjct: 595 SRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHV 654

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           G + EG +  + M   Y+L P  EH++C+VDLLGRA  L+E   F+ SM ++P   +W  
Sbjct: 655 GFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRT 714

Query: 637 LLGA-CRVHS-NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
           +LGA CR +  N ELG   A+ LLEL+P N  NYVL++N++A+  KW+DV + R  M+ +
Sbjct: 715 VLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEA 774

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
            +KK  G SW+ + + +H F+A DK H E D IY KL E+  K+ R+ GY+ QT++ L +
Sbjct: 775 AVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKM-RDAGYIPQTKYALFD 833

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           +E E K ++L  HSE++A+A+ VL       IRI KNLRVC DCHS    +S++ GR++V
Sbjct: 834 LELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIV 892

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RD+NRFHHFE G CSCGDYW
Sbjct: 893 LRDSNRFHHFEDGKCSCGDYW 913



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 188/621 (30%), Positives = 309/621 (49%), Gaps = 56/621 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G +  A++LFD++S R + TW  ++  Y  NG+P      +  M   G   + + 
Sbjct: 143 IYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYA 202

Query: 61  FPCVIKACAMLKDLDC--GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-FRKARQLFD 117
           F   ++AC       C  G +IHGL+ K  Y S   + N L++MY  C D    AR +FD
Sbjct: 203 FGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFD 262

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            +G +  +  WNSIIS YS  G  + A  LF  MQ+ GL    ++F       E S  E 
Sbjct: 263 GIGIRNSIS-WNSIISVYSRRGDAVSAYDLFSSMQKEGL---GFSFKPNDAFSEFSVLEE 318

Query: 178 ---LGMEIHAATVKSGQN-LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
               G E+HA  +++G N  +V + N L+ MYA+ G + +A  V   +  KDSVSWNS++
Sbjct: 319 GRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLI 378

Query: 234 TGFVQNDL--------------------------------YCKAMQFFRELQGAGQKPDQ 261
           +G  QN+                                   +A+++F ++   G    +
Sbjct: 379 SGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSR 438

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
           V  +N +SA   L       ++HA  +K     D  IGN L+  Y KC  +N   ++F +
Sbjct: 439 VTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFAR 498

Query: 322 MT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
           M+  +D +SW ++I+GY  N    KA++L   +  +G   D     ++L AC+ +  + +
Sbjct: 499 MSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLER 558

Query: 381 TKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
             E+H   IR  L SD+V+ +A+VD+Y KCG IDY+   FE +  ++V SW SMIS Y  
Sbjct: 559 GMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYAR 618

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           +G   +AL+LF  M       D +T V  LSA S +  +++G E +   + + + L   V
Sbjct: 619 HGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE-HFKSMSEVYRLSPRV 677

Query: 500 A--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI----NANGLHGR-GKVAIDLF 551
              S +VD+  R G LD      N +  K ++++W +++     ANG +   G+ A ++ 
Sbjct: 678 EHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEML 737

Query: 552 YKMEAESFAPDHITFLALLYA 572
            ++E ++ A +++  LA +YA
Sbjct: 738 LELEPQN-AVNYV-LLANMYA 756



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 148/568 (26%), Positives = 270/568 (47%), Gaps = 58/568 (10%)

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           L +++ TF + +   + S       E+H  ++K G    ++++N LI +Y R G +  A 
Sbjct: 95  LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 154

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA---SG 272
            +  ++ N++ V+W  +++G+ QN    +A   FR++  AG  P+     +A+ A   SG
Sbjct: 155 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC-CVNYMGRVFYQMTAQDFISWT 331
             G  L G ++H    K  + SD+ + N L+ MY  C    N    VF  +  ++ ISW 
Sbjct: 215 PSGCKL-GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWN 273

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGL-----DADVMIIGSVLMACSGLKCMSQTKEIHG 386
           +II+ Y++    + A +LF ++Q EGL       D     SVL      +   + +E+H 
Sbjct: 274 SIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLE-----EGRRKGREVHA 328

Query: 387 YIIRKGLSD--LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           ++IR GL+D  + I N +V++Y K G I  + +VFE +  KD VSW S+IS    N  + 
Sbjct: 329 HVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSE 388

Query: 445 EALELFYLMNEAN---------VESDS-----------------------ITLVSALSAA 472
           +A E+F LM E +           SDS                       +T ++ LSA 
Sbjct: 389 DAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAV 448

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILW 531
           SSLS+ +   +++  +++   + + ++ ++L+  Y +CG ++   K+F    +T+D + W
Sbjct: 449 SSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSW 508

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            SMI+    +     A+DL + M  +    D  TF  +L AC+    +  G   +E+  C
Sbjct: 509 NSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERG---MEVHAC 565

Query: 592 DYQ--LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
             +  L+      + LVD+  +   ++ A +F   M +      W +++     H + E 
Sbjct: 566 GIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGEK 624

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAA 677
              +  +++ LD G P ++V    V +A
Sbjct: 625 ALKLFTRMM-LD-GQPPDHVTFVGVLSA 650



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 179/356 (50%), Gaps = 33/356 (9%)

Query: 263 CTVNAVSASGRLGNLLN----------GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           C     S+S    +L+N           +ELH  +IK GFV +L + NTL+++Y +   +
Sbjct: 91  CNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDL 150

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
               ++F +M+ ++ ++W  +I+GY QN    +A   FR +   G   +    GS L AC
Sbjct: 151 GSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 210

Query: 373 --SGLKCMSQTKEIHGYI--IRKGLSDLVILNAIVDVYGKC-GNIDYSRNVFESIESKDV 427
             SG        +IHG I   R G SD+V+ N ++ +YG C  + + +R+VF+ I  ++ 
Sbjct: 211 QESGPSGCKLGVQIHGLISKTRYG-SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNS 269

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANV-----ESDSITLVSALSAASSLSILKKGK 482
           +SW S+IS Y   G A  A +LF  M +  +      +D+ +  S L         +KG+
Sbjct: 270 ISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGR-----RKGR 324

Query: 483 ELNGFIIRKGFNLEG-SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           E++  +IR G N    ++ + LV+MYA+ GA+  A  VF  +  KD + W S+I+    +
Sbjct: 325 EVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQN 384

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS--GLINEGKKFLEIMRCDYQL 595
              + A ++F  M       D +++ +++ A S S   +    K FL++MR  + L
Sbjct: 385 ECSEDAAEMFSLMPEY----DQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGL 436


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 307/918 (33%), Positives = 488/918 (53%), Gaps = 89/918 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
           +Y KC S+  A ++FD+     V  WN+ L +Y    +    L  +  M    G + D F
Sbjct: 45  LYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNF 104

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDR 118
           T P  +KACA L+ L+ G  IHG   K     +D F+ ++LV +Y+KC    +A ++F+ 
Sbjct: 105 TIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEE 164

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
             ++ D VLW S+++ Y  +    EAL LF +M  +         V +L     + +   
Sbjct: 165 F-QRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLL----NLYAKT 219

Query: 179 GMEIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLENK------------- 224
           G E  AA + S    +  ++ + +IA YA      EA  + +++  K             
Sbjct: 220 GCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSAL 279

Query: 225 ----------------------DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
                                 D VSW ++L+G+ QN +  K+M  FR +   G +PD V
Sbjct: 280 QACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAV 339

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
             V  ++AS  LG       LH Y ++ GF S++ +G +L+++Y+KC  +    ++F  M
Sbjct: 340 AVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM 399

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELF-RTVQ-LEGLDA-----------DVMIIGSVL 369
             +D + W+++IA Y  +    +ALE+F + +Q ++G+ +             + I S  
Sbjct: 400 IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCT 459

Query: 370 MAC------------SGLKCMSQTKEI------------HGYIIRKGLS-DLVILNAIVD 404
           +A             +  + +    EI               I   GL  D  IL     
Sbjct: 460 LATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAI 519

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS-- 462
           +Y     ID +  VFE I +     W  MI  +  +G    +LEL+  M E  ++ D+  
Sbjct: 520 MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSG 579

Query: 463 -----ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
                ++++S L A  +L  L+KG+  + ++I+ GF  +  VA++++DMY++CG+LD+A 
Sbjct: 580 VIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLAR 639

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            +F+    KDL+ W++MI + G+HG G+ AIDLF +M      P H+TF  +L ACSHSG
Sbjct: 640 CLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG 699

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L+ EGK + ++M  ++ +     +YAC+VDLLGRA  L EA   + +M +EP A +W +L
Sbjct: 700 LLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL 759

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           LGACR+H+N +L E +A  L  LDP + G +VL+SN++AA  +W +VE+VR  M   G  
Sbjct: 760 LGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGAN 819

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K  G S +E  N++H F   D+SH + +++Y KL E+   + +  GYV  T FVLH++EE
Sbjct: 820 KIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPM-KHLGYVPLTDFVLHDIEE 878

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           E K   L  HSERLAIA+G++ ++ G+ +RITKNLR+C DCH+  KL+S++  R ++VRD
Sbjct: 879 EAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRD 938

Query: 818 ANRFHHFEAGVCSCGDYW 835
            +RFH FE GVCSCGDYW
Sbjct: 939 MHRFHRFEDGVCSCGDYW 956



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 238/479 (49%), Gaps = 71/479 (14%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           +++H  V K G     F    L ++YAKC   + AR++FD      +V LWNS + +Y  
Sbjct: 21  SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET-PHPNVHLWNSTLRSYCR 79

Query: 138 SGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQV 195
             Q  E L LF  M    G   + +T   AL+AC       LG  IH    K+ +    +
Sbjct: 80  EKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDM 139

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           +V +AL+ +Y++CG+M EA  V  + +  D+V W SM+TG+ QN+   +A+  F ++   
Sbjct: 140 FVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM--- 196

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
                                           +   F  DL + N+L+++YAK  C    
Sbjct: 197 -------------------------------VMMDCFDGDLPLVNSLLNLYAKTGCEKIA 225

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
             +F +M  +D ISW+T+IA YA N    +AL LF  +  +  + + + + S L AC+  
Sbjct: 226 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 285

Query: 376 KCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
           + + + K+IH   +                                   KDVVSW +++S
Sbjct: 286 RNLEEGKKIHKIAVW----------------------------------KDVVSWVALLS 311

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  NG+A +++ +F  M    ++ D++ +V  L+A+S L I ++   L+G+++R GFN 
Sbjct: 312 GYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNS 371

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
              V +SL+++Y++CG+L  A K+F  +  +D+++W+SMI A G+HGRG  A+++F +M
Sbjct: 372 NVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQM 430



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 9/296 (3%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
           ++  +  AC+  + +SQ   +H  + + G L D      +  +Y KC ++  +R VF+  
Sbjct: 6   VLVDLFQACNNGRSVSQ---LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMN-EANVESDSITLVSALSAASSLSILKKG 481
              +V  W S + SY       E L LF+LM   A    D+ T+  AL A + L +L+ G
Sbjct: 63  PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122

Query: 482 KELNGFIIRKG-FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           K ++GF  +      +  V S+LV++Y++CG +  A KVF   Q  D +LWTSM+     
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182

Query: 541 HGRGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +   + A+ LF +M   + F  D     +LL   + +G           M  +  +  W 
Sbjct: 183 NNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP-EKDVISWS 241

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
              AC  +       L   ++ +   + EP +    + L AC V  N E G+ + K
Sbjct: 242 TMIACYANNEAANEALNLFHEMIEK-RFEPNSVTVVSALQACAVSRNLEEGKKIHK 296



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/180 (20%), Positives = 82/180 (45%), Gaps = 2/180 (1%)

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           +L+  + + G   +   A+ L  +YA+C +L  A KVF+     ++ LW S + +     
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 543 RGKVAIDLFYKMEAESF-APDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           + +  + LF+ M   +  APD+ T    L AC+   ++  GK      + + ++      
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
            + LV+L  +   + EA +     Q  P   +W +++   + +++ E    +  +++ +D
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 296/817 (36%), Positives = 463/817 (56%), Gaps = 40/817 (4%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKC-YDFRKAR 113
           D F  P  IK+ A L+D      IHG  L+    +  T  + N+L+  YA+C        
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
                  +  D V +NS+ISA     +   AL   R+M     V++ +T V+ L AC   
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADHEVSS-FTLVSVLLACSHL 165

Query: 174 SFE--TLGMEIHAATVKSG---QNLQVYVANALIAMYARCGKMTEAAGVLYQLENK--DS 226
           + +   LG E HA  +K G   +  + +  NAL++MYAR G + +A  + +       D 
Sbjct: 166 ADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDL 225

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           V+WN+M++  VQ     +A+Q   ++   G +PD V   +A+ A  RL  L  G+E+HA+
Sbjct: 226 VTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAF 285

Query: 287 AIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT--AQDFISWTTIIAGYAQNN-C 342
            +K     ++  + + L+DMYA    V++  RVF  +    +    W  +I GYAQ+   
Sbjct: 286 VLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGM 345

Query: 343 HLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILN 400
             +A+ELF  ++ E G       +  VL AC+  +  +  + +HGY++++ + S+  + N
Sbjct: 346 DEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQN 405

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN------ 454
           A++D+Y + G +D +  +F  I+ +D+VSW ++I+  +  GL +EA +L   M       
Sbjct: 406 ALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAA 465

Query: 455 --EANVESD------------SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
             E  +E D            +ITL++ L   + L+   +GKE++G+ +R     + +V 
Sbjct: 466 SGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVG 525

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           S+LVDMYA+CG L +A  VF+ +  +++I W  +I A G+HG G  A+ LF +M A   A
Sbjct: 526 SALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEA 585

Query: 561 -PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAY 619
            P+ +TF+A L ACSHSGL++ G +  + M+ DY  +P P  +AC+VD+LGRA  L+EAY
Sbjct: 586 TPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAY 645

Query: 620 QFVRSMQI-EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
             + SM   E     W  +LGACR+H N +LG I A++L EL+P    +YVL+ N+++A+
Sbjct: 646 GIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAA 705

Query: 679 RKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKL 738
             W++  +VR  MR  G+ K PG SWIE+   IH F+A + +H ES +++  +  + E++
Sbjct: 706 GLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERM 765

Query: 739 EREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDC 798
            REG YV  T  VLH+V+E EK  ML  HSE+LAIA+G+L++  G+ IR+ KNLRVC DC
Sbjct: 766 RREG-YVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDC 824

Query: 799 HSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           H   K +SR+ GRE+V+RD  RFHHF  G CSCGDYW
Sbjct: 825 HEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 248/531 (46%), Gaps = 40/531 (7%)

Query: 1   MYGKCGSVLDAEQLF--DKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY + G V DA++LF         + TWN M+   V  G     ++    M  LG+  D 
Sbjct: 201 MYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDG 260

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLK-CGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            TF   + AC+ L+ L  G ++H  VLK     +  F+ ++LV MYA       AR++FD
Sbjct: 261 VTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFD 320

Query: 118 RMGEK-EDVVLWNSIISAYSASGQC-LEALGLFREMQ-RVGLVTNAYTFVAALQACEDSS 174
            + E    + +WN++I  Y+  G    EA+ LF  M+   G   +  T    L AC  S 
Sbjct: 321 MVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSE 380

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
             T    +H   VK       +V NAL+ MYAR G+M EA  +   ++ +D VSWN+++T
Sbjct: 381 VFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLIT 440

Query: 235 GFVQNDLYCKAMQFFRELQGA------------------GQK--PDQVCTVNAVSASGRL 274
           G +   L  +A Q  RE+Q                    GQ+  P+ +  +  +     L
Sbjct: 441 GCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVL 500

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
                GKE+H YA++    SDL +G+ L+DMYAKC C+     VF ++  ++ I+W  +I
Sbjct: 501 AAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLI 560

Query: 335 AGYAQNNCHLKALELF-RTV-QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK- 391
             Y  +    +AL LF R V   E    +V  I + L ACS    + +  E+   + R  
Sbjct: 561 MAYGMHGLGDEALALFDRMVANGEATPNEVTFIAA-LAACSHSGLVDRGLELFQGMKRDY 619

Query: 392 GLSDLVILNA-IVDVYGKCGNIDYSRNVFESIESKD--VVSWTSMISS-YVHNG--LANE 445
           G      L+A +VDV G+ G +D +  +  S+   +  V +W++M+ +  +H    L   
Sbjct: 620 GFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRI 679

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           A E  + + E +  S  + L +  SAA    + +   E+ G + ++G   E
Sbjct: 680 AAERLFEL-EPDEASHYVLLCNIYSAA---GLWENSTEVRGMMRQRGVAKE 726


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/722 (36%), Positives = 430/722 (59%), Gaps = 3/722 (0%)

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           +FD M E+ + V + ++I  Y+ S + +EA  LF  +   G   N + F   L+      
Sbjct: 2   VFDEMPER-NTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
           +  LG  +H   +K G     ++  ALI  Y+  G ++ A  V  ++ +KD VSW  M+ 
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            + +ND + +A++FF +++ AG KP+       + A   L N   GK +H   +K  +  
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           DL +G  L+++Y +C   +   R F  M   D I W+ +I+ +AQ+    KALE+F  ++
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNID 413
              +  +     SVL A + ++ +  +K IHG+ ++ GLS D+ + NA++  Y KCG I+
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            S  +FE++  ++ VSW ++I SYV  G    AL LF  M    V++  +T  S L A +
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           +L+ L+ G +++    +  +  + +V ++L+DMYA+CG++  A  +F+ +  +D + W +
Sbjct: 361 TLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNA 420

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           +I    +HG G  AI +F  M+     PD +TF+ +L ACS++G ++EGK++   M+ DY
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDY 480

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
            ++P  EHY C+V L+GR+ +L++A +F+  +  EP+  +W ALLGAC +H++ ELG I 
Sbjct: 481 GIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRIS 540

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHS 713
           A+++LEL+P +  ++VL+SN++A +R+W +V  VR  M+  G+KK PG SWIE    +H 
Sbjct: 541 AQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHC 600

Query: 714 FIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAI 773
           F   D SH++  ++   + E      R+ GY  Q   VL +VE++EK ++L+ HSERLA+
Sbjct: 601 FTVADTSHADL-KLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLAL 659

Query: 774 AYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
           A+G+++   G  IRI KNLR+CVDCHS  KL+S++ GR+++VRD NRFHHFE G CSC D
Sbjct: 660 AFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCAD 719

Query: 834 YW 835
           YW
Sbjct: 720 YW 721



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 274/532 (51%), Gaps = 6/532 (1%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           +FD++ +R   ++  ++  Y  + + +   E ++R+   G  ++ F F  V+K    ++ 
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
            + G  +HG VLK GY S  FI  +L+  Y+       AR++FD +  K D+V W  +I+
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSK-DMVSWTGMIA 120

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
           +Y+ +    EAL  F +M+  G   N +TF   L+AC        G  +H + +K+    
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            +YV   L+ +Y RCG   +A      +   D + W+ M++ F Q+    KA++ F +++
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
            A   P+Q    + + AS  + +L   K +H +A+K G  +D+ + N LM  YAKC C+ 
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
               +F  ++ ++ +SW TII  Y Q     +AL LF  +    + A  +   S+L AC+
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360

Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L  +    ++H    +     D+ + NA++D+Y KCG+I  +R +F+ ++ +D VSW +
Sbjct: 361 TLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNA 420

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           +I  Y  +GL  EA+++F LM E   + D +T V  LSA S+   L +GK+     +++ 
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFT-SMKQD 479

Query: 493 FNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLH 541
           + +E  +   + +V +  R G LD A K    +     +++W +++ A  +H
Sbjct: 480 YGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIH 531



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 229/446 (51%), Gaps = 11/446 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G V  A ++FD++S + + +W  M+ +Y  N      LE +S+MRV G   + FTF
Sbjct: 91  YSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTF 150

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+KAC  L++ D G  +H  VLK  Y+   ++   L+ +Y +C D   A + F  M  
Sbjct: 151 AGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDM-P 209

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ W+ +IS ++ SGQ  +AL +F +M+R  ++ N +TF + LQA  D     L   
Sbjct: 210 KNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKT 269

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   +K+G +  V+V+NAL+A YA+CG + ++  +   L +++ VSWN+++  +VQ   
Sbjct: 270 IHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGD 329

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F  +     +  +V   + + A   L  L  G ++H    K  +  D+ +GN 
Sbjct: 330 GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNA 389

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC  +     +F  +  +D +SW  II GY+ +   ++A+++F  ++      D
Sbjct: 390 LIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPD 449

Query: 362 VMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
            +    VL ACS    + + K+        Y I   +        +V + G+ GN+D + 
Sbjct: 450 ELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEH---YTCMVWLMGRSGNLDQAV 506

Query: 417 NVFESIE-SKDVVSWTSMISS-YVHN 440
              E I     V+ W +++ +  +HN
Sbjct: 507 KFIEDIPFEPSVMIWRALLGACVIHN 532



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 186/370 (50%), Gaps = 20/370 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y +CG   DA + F  + +  V  W+ M+  +  +G+  + LE + +MR   +  + FT
Sbjct: 191 LYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFT 250

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V++A A ++ LD    IHG  LK G  +  F+ N+L+A YAKC    ++ +LF+ + 
Sbjct: 251 FSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALS 310

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ DV  WN+II +Y   G    AL LF  M R  +     T+ + L+AC   +   LG+
Sbjct: 311 DRNDVS-WNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGL 369

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H  T K+     V V NALI MYA+CG + +A  +   L+ +D VSWN+++ G+  + 
Sbjct: 370 QVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHG 429

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A++ F  ++    KPD++  V  +SA    G L  GK+ +  ++KQ +  +     
Sbjct: 430 LGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ-YFTSMKQDYGIE----- 483

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTII-AGYAQNNCHLKALEL 349
             M+ Y   C V  MGR      A  FI           W  ++ A    N+  L  +  
Sbjct: 484 PCMEHYT--CMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISA 541

Query: 350 FRTVQLEGLD 359
            R ++LE  D
Sbjct: 542 QRVLELEPRD 551


>gi|115458888|ref|NP_001053044.1| Os04g0469400 [Oryza sativa Japonica Group]
 gi|113564615|dbj|BAF14958.1| Os04g0469400, partial [Oryza sativa Japonica Group]
          Length = 401

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 235/399 (58%), Positives = 302/399 (75%)

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           +  NGL +EA+ LF  M  A ++ DS+ LV  L A + LS L KGKE++GF+IR  F +E
Sbjct: 3   FAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 62

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
           G+V SSLVDMY+ CG+++ A KVF+  + KD++LWT+MINA G+HG GK AI +F +M  
Sbjct: 63  GAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLE 122

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
              +PDH++FLALLYACSHS L++EGK +L++M   Y+L PW EHYAC+VDLLGR+   E
Sbjct: 123 TGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTE 182

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EAY+F++SM +EP + VWCALLGACR+H N EL  I   KLLEL+P NPGNYVL+SNVFA
Sbjct: 183 EAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFA 242

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
              KW +V+++R +M   GL+K P  SWIEIGN +H+F ARD SH +S  I+ KLAEITE
Sbjct: 243 EMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITE 302

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           KL REG YV  T FVLH+V EEEK+ +L+ HSERLAI++G++ +  G+ +RI KNLRVC 
Sbjct: 303 KLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCG 362

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCH F KLVS+LF RE+VVRDANRFHHF  G CSCGD+W
Sbjct: 363 DCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 401



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 131/241 (54%), Gaps = 6/241 (2%)

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSD 395
           +A+N    +A+ LF  +   G+  D + +  +L A +GL  +++ KEIHG++IR K   +
Sbjct: 3   FAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 62

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
             +++++VD+Y  CG+++Y+  VF+  + KDVV WT+MI++   +G   +A+ +F  M E
Sbjct: 63  GAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLE 122

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG--SVASSLVDMYARCGAL 513
             V  D ++ ++ L A S   ++ +GK     ++ K + L+      + +VD+  R G  
Sbjct: 123 TGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSK-YKLQPWQEHYACVVDLLGRSGQT 181

Query: 514 DIANKVFNCVQTKDL-ILWTSMINANGLHGRGKVAIDLFYK-MEAESFAPDHITFLALLY 571
           + A K    +  +   ++W +++ A  +H   ++A+    K +E E   P +   ++ ++
Sbjct: 182 EEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVF 241

Query: 572 A 572
           A
Sbjct: 242 A 242



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 17/287 (5%)

Query: 33  YVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDST 92
           +  NG     +  + +M   GI  D+     ++ A A L  L  G +IHG +++  +   
Sbjct: 3   FAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 62

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
             +V+SLV MY+ C     A ++FD   + +DVVLW ++I+A    G   +A+ +F+ M 
Sbjct: 63  GAVVSSLVDMYSGCGSMNYALKVFDE-AKCKDVVLWTAMINATGMHGHGKQAIYIFKRML 121

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN--ALIAMYARCGK 210
             G+  +  +F+A L AC  S     G + +   + S   LQ +  +   ++ +  R G+
Sbjct: 122 ETGVSPDHVSFLALLYACSHSKLVDEG-KFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQ 180

Query: 211 MTEAAGVLYQLE-NKDSVSWNSMLTG---FVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
             EA   +  +     SV W ++L        ++L   A     EL+     P     V+
Sbjct: 181 TEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELE--PDNPGNYVLVS 238

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSD-----LQIGNTLMDMYAK 308
            V A   +G   N KE+     +QG   D     ++IGNT+    A+
Sbjct: 239 NVFA--EMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTAR 283



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 104/205 (50%), Gaps = 5/205 (2%)

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           F +N L  +A+  F ++  AG +PD V  V  + A   L +L  GKE+H + I+  F  +
Sbjct: 3   FAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 62

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             + ++L+DMY+ C  +NY  +VF +   +D + WT +I     +    +A+ +F+ +  
Sbjct: 63  GAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLE 122

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILNA-IVDVYGKCGNID 413
            G+  D +   ++L ACS  K + + K     ++ K  L       A +VD+ G+ G  +
Sbjct: 123 TGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTE 182

Query: 414 YSRNVFES--IESKDVVSWTSMISS 436
            +    +S  +E K VV W +++ +
Sbjct: 183 EAYKFIKSMPLEPKSVV-WCALLGA 206



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
           ++ +G   EA+ LF +M   G+  ++   V  L A    S  T G EIH   ++    ++
Sbjct: 3   FAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 62

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
             V ++L+ MY+ CG M  A  V  + + KD V W +M+     +    +A+  F+ +  
Sbjct: 63  GAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLE 122

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG-FVSDLQIGNTLMDMYAK--CCC 311
            G  PD V  +  + A             H+  + +G F  D+ +    +  + +   C 
Sbjct: 123 TGVSPDHVSFLALLYACS-----------HSKLVDEGKFYLDMMVSKYKLQPWQEHYACV 171

Query: 312 VNYMGRVFYQMTAQDFI 328
           V+ +GR      A  FI
Sbjct: 172 VDLLGRSGQTEEAYKFI 188



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CGS+  A ++FD+   + V  W AM+ A   +G   + +  + RM   G+S D  +
Sbjct: 72  MYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVS 131

Query: 61  FPCVIKACAMLKDLDCG 77
           F  ++ AC+  K +D G
Sbjct: 132 FLALLYACSHSKLVDEG 148


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 298/829 (35%), Positives = 472/829 (56%), Gaps = 28/829 (3%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVL--GISVDAFTFPCVIKACAMLK--DLDCGAKIH 81
           WNA+L  +   G     L     +     GI+ D FT P   ++C  L+      G ++H
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVH 91

Query: 82  GLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK-EDVVLWNSIISAYSASGQ 140
            L  K G     F+ NSLV+MY +C     A ++F  + +   ++V WN++++A S  G 
Sbjct: 92  ALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALS--GD 149

Query: 141 CLEALGLFRE-MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
               L LFR+ +  VG + +  T V  L  C    +   G  +H    KSG +    V N
Sbjct: 150 PRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGN 209

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ--GAGQ 257
           AL+ MYA+CG++ +A       E    VSWN ML  + +N     A    R++Q    G 
Sbjct: 210 ALVDMYAKCGELADAERAFP--EAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGS 267

Query: 258 KP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--VSDLQIGNTLMDMYAKCCCVNY 314
            P D++  ++ + A      L   +ELHA+ +++G    SD ++ N L+  Y +C  + +
Sbjct: 268 VPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASD-KVPNALVAAYGRCGRLLH 326

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE---GLDADVMIIGSVLMA 371
             RVF  +  +   SW T+I+ +AQ N    A+ELF  +Q+    GL  D   IGS+LMA
Sbjct: 327 ADRVFTDIRRKTVSSWNTLISAHAQQNT-AAAIELF--IQMTNACGLKPDGFSIGSLLMA 383

Query: 372 CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY-SRNVFESIESKDVVS 429
           C+  K +   K  HG+I+R GL  D VI  +++  Y +C   +Y +R +F+++E K  V 
Sbjct: 384 CADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVL 443

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDS-ITLVSALSAASSLSILKKGKELNGFI 488
           W +MIS Y  NGL  E+L+LF  M        S I+  SAL A S LS ++ GKE++ F 
Sbjct: 444 WIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFA 503

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMINANGLHGRGKVA 547
           ++     +  ++SSL+DMY++CG ++ A   F+ ++ +D  + WT+MI    ++G G+ A
Sbjct: 504 LKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREA 563

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY-QLDPWPEHYACLV 606
           ++L+ KM  E   PD  T+L LL AC H+G++ EG +F + MR  + +++   EHY+C++
Sbjct: 564 VELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVI 623

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
            +L RA    +A   +  M  EP A++  ++L AC +H   ELG  VA++LLEL+P    
Sbjct: 624 GMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLLELEPDKAE 683

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
           +YVL SN++A SR+W D+ +VR  +R +G+ K PG SWI++  K++SF+A +  H E ++
Sbjct: 684 HYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEMEQ 743

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
           +      + E++ RE GYV  T  VLH +EEEEKV+ L+ HSE+ A+ +G+L++   + +
Sbjct: 744 VRGMWRSLEERI-REIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLLRTATPATV 802

Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           R+ KN+R+C DCH+  +L+S++ GR++VVRD  RFHHF  G+CSCGDYW
Sbjct: 803 RVFKNIRMCKDCHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851



 Score =  275 bits (704), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 181/589 (30%), Positives = 300/589 (50%), Gaps = 20/589 (3%)

Query: 1   MYGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVD 57
           MYG+CG V DAE++F  +  + R + +WNA++ A   +G+P R LE +    V +G  VD
Sbjct: 112 MYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAAL--SGDPRRGLELFRDCLVAVGGMVD 169

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             T   V+  CA L   + G  +HGL  K G+D+   + N+LV MYAKC +   A + F 
Sbjct: 170 EATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFP 229

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ---RVGLVTNAYTFVAALQACEDSS 174
              E   VV WN ++ AY+ + +   A GL R+MQ      +  +  T ++ L AC   +
Sbjct: 230 ---EAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPT 286

Query: 175 FETLGMEIHAATVKSGQNLQV-YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
             +   E+HA TV+ G +     V NAL+A Y RCG++  A  V   +  K   SWN+++
Sbjct: 287 ELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLI 346

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           +   Q +       F +     G KPD     + + A     +LL+ K  H + ++ G  
Sbjct: 347 SAHAQQNTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLE 406

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQ-MTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            D  I  +L+  Y +C    Y+ RV +  M  +  + W  +I+GY+QN    ++L+LFR 
Sbjct: 407 RDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFRE 466

Query: 353 VQ-LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCG 410
           +Q +EG  + V+   S LMACS L  +   KE+H + ++  L D   L ++++D+Y KCG
Sbjct: 467 MQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCG 526

Query: 411 NIDYSRNVFESIESKDV-VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
            ++ +R  F+ ++++D  VSWT+MI+ Y  NGL  EA+EL+  M    +E D  T +  L
Sbjct: 527 FVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLL 586

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGAL-DIANKVFNCVQTK 526
            A     +L++G      +      +E  +   S ++ M +R G   D    +    Q  
Sbjct: 587 MACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEP 646

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYK-MEAESFAPDHITFLALLYACS 574
           D  + +S+++A  +HG  ++  D+  + +E E    +H    + +YA S
Sbjct: 647 DAKILSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGS 695


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/795 (34%), Positives = 469/795 (58%), Gaps = 17/795 (2%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
            +D+ TF  ++K+C   +D   G  +H  +++   +    + NSL+++Y+K  D  KA  
Sbjct: 59  PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118

Query: 115 LFDRMGE--KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           +F+ M    K DVV W+++++ Y  +G+ L+A+ +F E   +GLV N Y + A ++AC +
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178

Query: 173 SSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAA-GVLYQLENKDSVSWN 230
           S F  +G       +K+G     V V  +LI M+ +     E A  V  ++   + V+W 
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
            M+T  +Q     +A++FF ++  +G + D+    +  SA   L NL  GK+LH++AI+ 
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298

Query: 291 GFVSDLQIGNTLMDMYAKCCC---VNYMGRVFYQMTAQDFISWTTIIAGYAQN-NCHLKA 346
           G V D++   +L+DMYAKC     V+   +VF +M     +SWT +I GY +N N   +A
Sbjct: 299 GLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA 356

Query: 347 LELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVD 404
           + LF  +  +G ++ +     S   AC  L      K++ G   ++GL S+  + N+++ 
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS 416

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
           ++ K   ++ ++  FES+  K++VS+ + +     N    +A +L   + E  +   + T
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
             S LS  +++  ++KG++++  +++ G +    V ++L+ MY++CG++D A++VFN ++
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            +++I WTSMI     HG     ++ F +M  E   P+ +T++A+L ACSH GL++EG +
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596

Query: 585 FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
               M  D+++ P  EHYAC+VDLL RA  L +A++F+ +M  +    VW   LGACRVH
Sbjct: 597 HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656

Query: 645 SNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSW 704
           SN ELG++ A+K+LELDP  P  Y+ +SN++A + KW++  ++R +M+   L K  G SW
Sbjct: 657 SNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSW 716

Query: 705 IEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV----EEEEK 760
           IE+G+KIH F   D +H  + +IY +L  +  +++R  GYV  T  VLH +    +E EK
Sbjct: 717 IEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKR-CGYVPDTDLVLHKLEEENDEAEK 775

Query: 761 VQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANR 820
            ++LY HSE++A+A+G++ +++   +R+ KNLRVC DCH+  K +S + GRE+V+RD NR
Sbjct: 776 ERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNR 835

Query: 821 FHHFEAGVCSCGDYW 835
           FHHF+ G CSC DYW
Sbjct: 836 FHHFKDGKCSCNDYW 850



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/590 (26%), Positives = 301/590 (51%), Gaps = 21/590 (3%)

Query: 1   MYGKCGSVLDAEQLFD---KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
           +Y K G    AE +F+   +  +R V +W+AM+  Y +NG  L  ++ +     LG+  +
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN-SLVAMYAKCYD-FRKARQL 115
            + +  VI+AC+    +  G    G ++K G+  +D  V  SL+ M+ K  + F  A ++
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD+M E  +VV W  +I+     G   EA+  F +M   G  ++ +T  +   AC +   
Sbjct: 226 FDKMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARC---GKMTEAAGVLYQLENKDSVSWNSM 232
            +LG ++H+  ++SG  L   V  +L+ MYA+C   G + +   V  ++E+   +SW ++
Sbjct: 285 LSLGKQLHSWAIRSG--LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342

Query: 233 LTGFVQN-DLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           +TG+++N +L  +A+  F E+   G  +P+     +A  A G L +   GK++   A K+
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G  S+  + N+++ M+ K   +    R F  ++ ++ +S+ T + G  +N    +A +L 
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
             +    L        S+L   + +  + + ++IH  +++ GLS +  + NA++ +Y KC
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G+ID +  VF  +E+++V+SWTSMI+ +  +G A   LE F  M E  V+ + +T V+ L
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAIL 582

Query: 470 SAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-D 527
           SA S + ++ +G +  N          +    + +VD+  R G L  A +  N +  + D
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642

Query: 528 LILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +++W + + A  +H     GK+A     +++     P     L+ +YAC+
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKILELDPNE--PAAYIQLSNIYACA 690


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 279/754 (37%), Positives = 423/754 (56%), Gaps = 3/754 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + GS+ DA+ LF  +       WN M+  +   G+    L  Y +M   G+S D +T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V+KAC  LK +  G  +H  V   G     F+ +SL+ +YA+      A+ LFD + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K D VLWN +++ Y  +G    A+ +F EM+   +  N+ TF   L  C   +   LG 
Sbjct: 121 QK-DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   V  G  L   VAN L+AMY++C  +  A  +   L   D VSWN +++G+VQN 
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNG 239

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A   FR +  AG KPD +   + +     L +L + KE+H Y I+   V D+ + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y KC  V    +   Q ++ D +  TT+I+GY  N  + +ALE FR +  E +  
Sbjct: 300 ALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVF 419
             +   S+  A +GL  ++  KE+HG II+  L +   + +AI+D+Y KCG +D +  VF
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVF 419

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I  KD + W SMI+S   NG   EA+ LF  M       D +++  ALSA ++L  L 
Sbjct: 420 NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALH 479

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GKE++G +I+     +    SSL+DMYA+CG L+ + +VF+ +Q K+ + W S+I+A G
Sbjct: 480 YGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYG 539

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG  K  + LF++M      PDH+TFL ++ AC H+G ++EG ++  +M  +Y +    
Sbjct: 540 NHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARM 599

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC+ D+ GRA  L EA++ + SM   P A VW  LLGAC +H N EL E+ +K L +
Sbjct: 600 EHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFD 659

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LDP N G YVL++NV A + KW+ V +VR  M+  G++K PG SWIE+ N  H F+A D 
Sbjct: 660 LDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADG 719

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
           SH  + +IY  L  +  +L++E GYV Q    +H
Sbjct: 720 SHPLTAQIYSVLDSLLLELKKE-GYVPQLYLPMH 752


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 277/754 (36%), Positives = 424/754 (56%), Gaps = 3/754 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + GS+ DA+ LF  +       WN M+  +   G+    L  Y +M   G+S D +T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V+KAC  LK +  G  +H  V   G     F+ +SL+ +YA+      A+ LFD + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K D VLWN +++ Y  +G    A+ +F EM+   +  N+ TF   L  C   +   LG 
Sbjct: 121 QK-DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   V  G  L   VAN L+AMY++C  +  A  +       D VSWN +++G+VQN 
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNG 239

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A   FR +  AG KPD +   + +     L +L + KE+H Y I+   V D+ + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y KC  V    ++  Q ++ D +  TT+I+GY  N  + +ALE FR +  E +  
Sbjct: 300 ALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVF 419
             +   S+  A +GL  ++  KE+HG II+  L +   + +AI+D+Y KCG +D +  VF
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVF 419

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I  KD + W SMI+S   NG   EA+ LF  M       D +++  ALSA ++L  L 
Sbjct: 420 NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALH 479

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GKE++G +I+     +    SSL+DMYA+CG L+ + +VF+ +Q ++ + W S+I+A G
Sbjct: 480 YGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYG 539

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG  K  + LF++M      PDH+TFL ++ AC H+G ++EG ++  +M  +Y +    
Sbjct: 540 NHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARM 599

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC+ D+ GRA  L+EA++ + SM   P A VW  LLGAC +H N EL E+ +K L +
Sbjct: 600 EHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFD 659

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LDP N G YVL++NV A + KW+ V +VR  M+  G++K PG SWIE+ N  H F+A D 
Sbjct: 660 LDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADG 719

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
           SH  + +IY  L  +  +L++E GYV Q    +H
Sbjct: 720 SHPLTAQIYSVLDSLLLELKKE-GYVPQLYLPMH 752


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 275/776 (35%), Positives = 430/776 (55%), Gaps = 99/776 (12%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           T++  F   LQ          G  +H   +K G +L VY+ N L+  YA+ G +  A  V
Sbjct: 8   TSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHV 67

Query: 218 -------------------------------LYQLENKDSVSWNSMLTGFVQNDLYCKAM 246
                                          LY++ + D VSW +++ G+ Q  L+  A+
Sbjct: 68  FDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAI 127

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
             F ++      P Q    N +S+      L  G+++H++ +K G  S + +  +L++MY
Sbjct: 128 WMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187

Query: 307 AKCCCVNYMGRVFYQMTAQ-------------------------------DFISWTTIIA 335
           AKC        VF +MT +                               D +SW ++I+
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247

Query: 336 GYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           GY+Q   +L+AL +F + +    L  D   + S+L AC+ L+ ++  K+IH YI+R    
Sbjct: 248 GYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307

Query: 395 ----------------------------------DLVILNAIVDVYGKCGNIDYSRNVFE 420
                                             +++   +++D Y K GN+  +R +F 
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFN 367

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  +DVV+WT+MI  YV NGL N+ALELF LM     E +S TL + LS +SSL+IL+ 
Sbjct: 368 KLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEH 427

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANG 539
           GK+++   I+ G +   SV ++L+ MYA+ G +++A +VF+     K+++ WTSMI A  
Sbjct: 428 GKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALA 487

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG GK AI+LF +M +    PDHIT++ +L AC+H GL+ +G+K+  +M   ++++P  
Sbjct: 488 QHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTL 547

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            HYAC++DL GRA  L+EAY F+ SM IEP    W +LL +C++H N +L ++ A++LL 
Sbjct: 548 SHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLL 607

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           +DPGN G Y+ ++NV++A  KW++  Q R  M+  G++K  G SWI I N++H+F   D 
Sbjct: 608 IDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDV 667

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H + DEIYK +AEI E++++  G++  T+ VLH++EEE K Q+L  HSE+LAIA+G+L 
Sbjct: 668 IHPQKDEIYKLMAEIWEEIKKM-GFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLN 726

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + E + +RI KNLRVC DCHS  K +S+L GRE++VRDA RFHHF+ G CSC DYW
Sbjct: 727 TPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 152/561 (27%), Positives = 246/561 (43%), Gaps = 108/561 (19%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---------------EPL------ 40
           Y K GS+  A  +FD++  ++ F+WN ++  Y   G               +P+      
Sbjct: 55  YAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAII 114

Query: 41  ----------RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYD 90
                       +  +++M    +    FT   V+ +CA  + LD G KIH  V+K G  
Sbjct: 115 VGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLG 174

Query: 91  STDFIVNSLVAMYAKCYDFRKARQLFDRMGEK---------------------------- 122
           S   +  SL+ MYAKC D   A+ +FDRM  K                            
Sbjct: 175 SCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKM 234

Query: 123 --EDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLG 179
              D+V WNS+IS YS  G  LEAL +F +M     L  + +T  + L AC +     +G
Sbjct: 235 PDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIG 294

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARC------------------------------- 208
            +IHA  +++       V NALI+MYA+                                
Sbjct: 295 KQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYT 354

Query: 209 --GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
             G +  A  +  +L ++D V+W +M+ G+VQN L+  A++ FR +   G +P+      
Sbjct: 355 KLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAA 414

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF-YQMTAQ 325
            +S S  L  L +GK++HA AIK G  S   + N L+ MYAK   +N   RVF      +
Sbjct: 415 MLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKK 474

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           + +SWT++I   AQ+    +A+ LF  +   G+  D +    VL AC+ +  + Q ++ +
Sbjct: 475 EIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYY 534

Query: 386 GYI-----IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS-YV 438
             +     I   LS    +   +D+YG+ G +  +    ES+    D ++W S+++S  +
Sbjct: 535 NMMTEVHEIEPTLSHYACM---IDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKI 591

Query: 439 HNG--LANEALELFYLMNEAN 457
           H    LA  A E   L++  N
Sbjct: 592 HKNADLAKVAAERLLLIDPGN 612



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 158/588 (26%), Positives = 262/588 (44%), Gaps = 103/588 (17%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +++    +KD   G  +H  ++K G     +++N+L+  YAK    R A  +FD M 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREM---------------QRVGLVTNA----- 160
            K     WN++IS Y+  G    +  L  EM                + GL  NA     
Sbjct: 73  LK-STFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFA 131

Query: 161 -----------YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
                      +T    L +C  +    +G +IH+  VK G    V VA +L+ MYA+CG
Sbjct: 132 KMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191

Query: 210 ----------KMTE---------------------AAGVLYQLENKDSVSWNSMLTGFVQ 238
                     +MT                      AA    ++ ++D VSWNSM++G+ Q
Sbjct: 192 DPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQ 251

Query: 239 NDLYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
                +A+  F + L     KPD     + +SA   L  L  GK++HAY ++    +   
Sbjct: 252 QGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311

Query: 298 IGNTLMDMYAKCCCVNY---------------------------MGRV------FYQMTA 324
           +GN L+ MYAK   V                             +G V      F ++  
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D ++WT +I GY QN     ALELFR +  EG + +   + ++L   S L  +   K+I
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431

Query: 385 HGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNGL 442
           H   I+ G S    + NA++ +Y K GNI+ ++ VF+     K++VSWTSMI +   +GL
Sbjct: 432 HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGL 491

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA-- 500
             EA+ LF  M    ++ D IT V  LSA + + ++++G++    ++ +   +E +++  
Sbjct: 492 GKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYN-MMTEVHEIEPTLSHY 550

Query: 501 SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA 547
           + ++D+Y R G L  A      +  + D I W S++ +  +H    +A
Sbjct: 551 ACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 207/453 (45%), Gaps = 61/453 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           +Y + G    A   F+K+  R + +WN+M+  Y   G  L  L  +S+M     +  D F
Sbjct: 217 LYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNF 276

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC------------- 106
           T   ++ ACA L+ L+ G +IH  +L+   +++  + N+L++MYAK              
Sbjct: 277 TLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHN 336

Query: 107 --------------------YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALG 146
                                + + AR++F+++ ++ DVV W ++I  Y  +G   +AL 
Sbjct: 337 RTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR-DVVAWTAMIVGYVQNGLWNDALE 395

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           LFR M   G   N+YT  A L      +    G +IHA+ +K+G++    V NALIAMYA
Sbjct: 396 LFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYA 455

Query: 207 RCGKMTEAAGVLYQLEN--KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           + G +  A  V + L N  K+ VSW SM+    Q+ L  +A+  F  +   G KPD +  
Sbjct: 456 KTGNINVAKRV-FDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITY 514

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           V  +SA   +G +  G++ +        ++++      +  YA  C ++  GR      A
Sbjct: 515 VGVLSACTHVGLVEQGRKYY------NMMTEVHEIEPTLSHYA--CMIDLYGRAGLLQEA 566

Query: 325 ----------QDFISWTTIIAG-YAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLMAC 372
                      D I+W +++A      N  L  +   R + ++ G     + + +V  AC
Sbjct: 567 YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626

Query: 373 SGLKCMSQTKEI---HGYIIRKGLSDLVILNAI 402
              +  +QT+++    G    KG+S + I N +
Sbjct: 627 GKWENAAQTRKLMKDRGVRKEKGISWIHIKNEV 659


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 259/725 (35%), Positives = 421/725 (58%), Gaps = 3/725 (0%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A +LF  M EK  V  WN++++ Y+  G   + L LF +M+      + +T    L+ C 
Sbjct: 4   AERLFFGMPEKNGVS-WNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCA 62

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           ++     G  +HA  ++SG  +  ++  +L+ MY++CG + +A  V  ++ N D V+W++
Sbjct: 63  NTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M+TG  Q     +A + F  ++  G +P+Q    + VS +  +G+L  G+ +H    K G
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F SD  + N L+ MY K  CV    +VF  MT  D +SW  +++G+  +    +   +F 
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCG 410
            + LEG   ++    SVL +CS L      K++H +II+    D   +  A+VD+Y K  
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            ++ +   F+ + ++D+ SWT +IS Y     A +A++ F  M    ++ +  TL S LS
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
             S ++ L+ G++L+   ++ G   +  V S+LVD+Y +CG ++ A  +F  + ++D++ 
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVS 422

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W ++I+    HG+G+ A++ F  M +E   PD  TF+ +L ACS  GL+ EGKK  + M 
Sbjct: 423 WNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMS 482

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
             Y ++P  EHYAC+VD+LGRA    E   F+  M + P + +W  +LGAC++H N + G
Sbjct: 483 KIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFG 542

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
           E  AKKL E++P    +Y+L+SN+FA+  +W DV  +R  M   G+KK PG SW+E+  +
Sbjct: 543 EKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQ 602

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSER 770
           +H F+++D SH +  EIY KL ++ + L    GYV +T+ VLHNV  +EK++ LY HSER
Sbjct: 603 VHVFLSQDGSHPKIREIYAKLDKLGQSL-MSIGYVPKTEVVLHNVSNKEKMEHLYYHSER 661

Query: 771 LAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCS 830
           LA+++ +L +     IRI KNLR+C DCH F KL+S +  +E+VVRD  RFHHF+ G CS
Sbjct: 662 LALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCS 721

Query: 831 CGDYW 835
           C D W
Sbjct: 722 CQDRW 726



 Score =  276 bits (705), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 166/555 (29%), Positives = 284/555 (51%), Gaps = 13/555 (2%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           AE+LF  + ++   +WNA+L  Y   G+  +VL+ + +M+        FT   V+K CA 
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
              L  G  +H L L+ G +  +F+  SLV MY+KC     A ++F ++    DVV W++
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKI-RNPDVVAWSA 122

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I+     G   EA  LF  M+R G   N +T  + +    +      G  IH    K G
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
                 V+N LI MY +   + +   V   + N D VSWN++L+GF  +    +  + F 
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           ++   G KP+    ++ + +   L +   GK++HA+ IK     D  +G  L+DMYAK  
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
           C+   G  F ++  +D  SWT II+GYAQ +   KA++ FR +Q EG+  +   + S L 
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362

Query: 371 ACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
            CS +  +   +++H   ++ G   D+ + +A+VD+YGKCG ++++  +F+ + S+D+VS
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVS 422

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFI 488
           W ++IS Y  +G   +ALE F +M    +  D  T +  LSA S + ++++GK+  +   
Sbjct: 423 WNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMS 482

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL----ILWTSMINANGLHGR- 543
              G N      + +VD+  R G     N+V   ++  +L    ++W +++ A  LHG  
Sbjct: 483 KIYGINPSIEHYACMVDILGRAGKF---NEVKIFIEEMNLTPYSLIWETVLGACKLHGNV 539

Query: 544 --GKVAIDLFYKMEA 556
             G+ A    ++ME 
Sbjct: 540 DFGEKAAKKLFEMEP 554



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 204/383 (53%), Gaps = 1/383 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG+V DA ++F K+    V  W+AM+      G      E +  MR  G   + FT
Sbjct: 95  MYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFT 154

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++     + DL  G  IHG + K G++S + + N L+ MY K        ++F+ M 
Sbjct: 155 LSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAM- 213

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D+V WN+++S +  S  C     +F +M   G   N +TF++ L++C        G 
Sbjct: 214 TNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGK 273

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +K+  +   +V  AL+ MYA+   + +A     +L N+D  SW  +++G+ Q D
Sbjct: 274 QVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTD 333

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA+++FR++Q  G KP++    + +S    +  L NG++LHA A+K G   D+ +G+
Sbjct: 334 QAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGS 393

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y KC C+ +   +F  + ++D +SW TII+GY+Q+    KALE FR +  EG+  
Sbjct: 394 ALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMP 453

Query: 361 DVMIIGSVLMACSGLKCMSQTKE 383
           D      VL ACS +  + + K+
Sbjct: 454 DEATFIGVLSACSFMGLVEEGKK 476



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 213/440 (48%), Gaps = 5/440 (1%)

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           M  A  + + +  K+ VSWN++L G+ Q     K ++ F +++    K  +      +  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
               G+L  GK LHA A++ G   D  +G +L+DMY+KC  V    +VF ++   D ++W
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
           + +I G  Q     +A ELF  ++ +G   +   + S++   + +  +   + IHG I +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 391 KGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
            G  SD ++ N ++ +Y K   ++    VFE++ + D+VSW +++S +  +        +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           FY M     + +  T +S L + SSL   + GK+++  II+   + +  V ++LVDMYA+
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK 300

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
              L+ A   F+ +  +D+  WT +I+      + + A+  F +M+ E   P+  T  + 
Sbjct: 301 ARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASC 360

Query: 570 LYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           L  CSH   +  G++   + ++  +  D +    + LVDL G+   +E A    + + I 
Sbjct: 361 LSGCSHMATLENGRQLHAVAVKAGHFGDIFVG--SALVDLYGKCGCMEHAEAIFKGL-IS 417

Query: 629 PTAEVWCALLGACRVHSNKE 648
                W  ++     H   E
Sbjct: 418 RDIVSWNTIISGYSQHGQGE 437


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 281/776 (36%), Positives = 446/776 (57%), Gaps = 10/776 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEK 122
           +IK C  + D   G ++H L ++CG+D  D  V  SLV MY   +     R++F+ M  K
Sbjct: 61  IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM-LK 119

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            +VV W S+++ Y  +G  L+ + LF  M+  G+  N +TF + L          LG  +
Sbjct: 120 RNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHV 179

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA ++K G    V+V N+L+ MYA+CG + EA  V  ++E +D VSWN+++ G V N   
Sbjct: 180 HAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRD 239

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A+Q F + + +     +      ++    L +L   ++LH+  +K GF S   +   L
Sbjct: 240 LEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTAL 299

Query: 303 MDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           MD Y K   ++    VF  M+ +Q+ +SWT +I G  QN     A  LF  ++ +G+  +
Sbjct: 300 MDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPN 359

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
            +   ++L         S   +IH  +I+        +  A++  Y K  + + + ++F+
Sbjct: 360 DLTYSTILTVSEA----SFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFK 415

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILK 479
            I+ KDVVSW++M++ Y   G  N A   F  M    ++ +  T+ SA+ A AS  + + 
Sbjct: 416 MIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVD 475

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G++ +   I+   +    V+S+LV MYAR G+++ A  VF     +DL+ W SM++   
Sbjct: 476 LGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYA 535

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG  + A+D+F +ME E    D +TFL+++  C+H+GL+ EG+++ ++M  DY + P  
Sbjct: 536 QHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTM 595

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           +HYAC+VDL  RA  L+E    +  M       +W ALLGACRVH N ELG++ A+KLL 
Sbjct: 596 DHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLS 655

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P +   YVL+SN+++A+ KWK+ ++VR  M    ++K  G SWI+I NK+H FIA DK
Sbjct: 656 LEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDK 715

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH  S++IY KL  +T KL++E GY   T FV H+V E++K  ML  HSERLA+A+G++ 
Sbjct: 716 SHPLSEQIYAKLRAMTAKLKQE-GYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIA 774

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +   + + I KNLRV  D H+  K+VS +  RE+V+RD  RFHHF++GVCSCGD+W
Sbjct: 775 TPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 162/599 (27%), Positives = 291/599 (48%), Gaps = 21/599 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY    SVLD  ++F+ + +R V TW ++L  Y+  G  L V+  + RMR  G+  + FT
Sbjct: 100 MYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFT 159

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+   A    +D G  +H   +K G  ST F+ NSL+ MYAKC    +AR +F RM 
Sbjct: 160 FSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRM- 218

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  D+V WN++++    +G+ LEAL LF + +    +    T+   +  C +     L  
Sbjct: 219 ETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLAR 278

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQN 239
           ++H++ +K G +    V  AL+  Y + G++ +A  V   +  +++ VSW +M+ G +QN
Sbjct: 279 QLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQN 338

Query: 240 DLYCKAMQFFRELQGAGQKPDQVC--TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
                A   F  ++  G  P+ +   T+  VS +          ++HA  IK  +     
Sbjct: 339 GDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASF------PPQIHAQVIKTNYECTPT 392

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +G  LM  Y+K C       +F  +  +D +SW+ ++  YAQ      A   F  + + G
Sbjct: 393 VGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHG 452

Query: 358 LDADVMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYS 415
           L  +   I S + AC S    +   ++ H   I+    D L + +A+V +Y + G+I+ +
Sbjct: 453 LKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENA 512

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           + VFE    +D++SW SM+S Y  +G + +AL++F  M    ++ D +T +S +   +  
Sbjct: 513 QCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHA 572

Query: 476 SILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTS 533
            ++++G++    ++R  G        + +VD+Y+R G LD    +   +       +W +
Sbjct: 573 GLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRA 632

Query: 534 MINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           ++ A  +H     GK+A +    +E      D  T++ L    S +G   E  +  ++M
Sbjct: 633 LLGACRVHKNVELGKLAAEKLLSLEPL----DSATYVLLSNIYSAAGKWKEKDEVRKLM 687


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 297/819 (36%), Positives = 460/819 (56%), Gaps = 40/819 (4%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKC-YDFRKA 112
           +D F  P  IK+ A L+D      +H   L+    +  +  + N+L+  YA+C       
Sbjct: 61  LDHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAAL 120

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQAC- 170
                   E  D V +NS+ISA     Q   AL   R+M   G    +++T V+ L AC 
Sbjct: 121 ALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACS 180

Query: 171 --EDSSFETLGMEIHAATVKSG---QNLQVYVANALIAMYARCGKMTEAAGVL------Y 219
                    LG E HA  +K G   +  + +  NAL++MYAR G + +A  +       +
Sbjct: 181 HLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAF 240

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
                D V+WN+M++  VQ     +A++   ++   G +PD V   +A+ A  RL  L  
Sbjct: 241 SPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLAL 300

Query: 280 GKELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT--AQDFISWTTIIAG 336
           G+E+HA  +K     ++  + + L+DMYA    V    RVF  +   ++    W  +I G
Sbjct: 301 GREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICG 360

Query: 337 YAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
           YAQ     +ALELF  ++ E G       +  VL AC+  +  +  + +HGY++++G++ 
Sbjct: 361 YAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAG 420

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           +  + NA++D+Y + G +D +R +F  I+ +DVVSW ++I+  V  G A EA +L   M 
Sbjct: 421 NRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQ 480

Query: 455 ---------------EAN-VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
                          EA+    ++ITL++ L   ++L+   +GKE++G+ +R     + +
Sbjct: 481 LPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIA 540

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           V S+LVDMYA+CG L  +  VF+ +  +++I W  +I A G+HG G  A+ LF +M A  
Sbjct: 541 VGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGG 600

Query: 559 FA-PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
            A P+ +TF+A L ACSHSGL++ G +    M  D+ + P P+ +AC+VD+LGRA  L+E
Sbjct: 601 EATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDE 660

Query: 618 AYQFVRSMQI-EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           AY  + SM+  E     W +LLGACR+H N ELGE+ A++L EL+PG   +YVL+ N+++
Sbjct: 661 AYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYS 720

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           A+  W     VR+RMR  G+ K PG SWIE+   IH F+A + SH  S E++  +  + E
Sbjct: 721 AAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWE 780

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           ++ REG Y   T  VLH+V+E+EK  ML  HSE+LAIA+G+L++  G+ IR+ KNLRVC 
Sbjct: 781 RMRREG-YAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCN 839

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCH   K +S++ GR++V+RD  RFHHF  G CSCGDYW
Sbjct: 840 DCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 222/467 (47%), Gaps = 32/467 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR------TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGI 54
           MY + G V DA+ LF   +         V TWN M+   V  G     +E    M  LG+
Sbjct: 219 MYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGV 278

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLK-CGYDSTDFIVNSLVAMYAKCYDFRKAR 113
             D  TF   + AC+ L+ L  G ++H +VLK     +  F+ ++LV MYA       AR
Sbjct: 279 RPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASAR 338

Query: 114 QLFDRMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACE 171
           ++FD + E    + +WN++I  Y+ +G   EAL LF  M+   G   +  T    L AC 
Sbjct: 339 RVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACA 398

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            S        +H   VK G     +V NAL+ MYAR G+M  A  +   ++ +D VSWN+
Sbjct: 399 RSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNT 458

Query: 232 MLTGFVQNDLYCKAMQFFRELQ--------------GAGQK--PDQVCTVNAVSASGRLG 275
           ++TG V      +A Q   E+Q              G   +  P+ +  +  +     L 
Sbjct: 459 LITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALA 518

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
               GKE+H YA++    SD+ +G+ L+DMYAKC C+     VF ++  ++ I+W  +I 
Sbjct: 519 APARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIM 578

Query: 336 GYAQNNCHLKALELFRTVQL--EGLDADVMIIGSVLMACSGLKCMSQTKEI-HGYIIRKG 392
            Y  +    +A+ LF  +    E    +V  I + L ACS    + +  E+ HG     G
Sbjct: 579 AYGMHGLGDEAVALFDEMAAGGEATPNEVTFI-AALAACSHSGLVDRGLELFHGMERDHG 637

Query: 393 LSDLVILNA-IVDVYGKCGNIDYSRNVFESIES--KDVVSWTSMISS 436
           +     L+A +VDV G+ G +D + ++  S+E   + V +W+S++ +
Sbjct: 638 VKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGA 684


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 279/783 (35%), Positives = 440/783 (56%), Gaps = 5/783 (0%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKAR 113
           +D++     ++ C    D   G  +H  V++ G       F  N L+  YAK      AR
Sbjct: 43  LDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATAR 102

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           +LFD M E+  V  + +++  Y+  G+  EAL LFR +QR G   N +     L+     
Sbjct: 103 RLFDGMPERNRVS-FVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTM 161

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
               L   IHA   K G +   +V  ALI  Y+ CG +  A  V   +  KD+V+W +M+
Sbjct: 162 DAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMV 221

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           + + +ND+   A+  F +++  G KP+     +A+ A+  L + L GK +H  ++K  + 
Sbjct: 222 SCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYD 281

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           ++  +G  L+DMYAKC  +     +F  +   D I W+ +I+ YAQ+  + +A E+F  +
Sbjct: 282 TEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRM 341

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
               +  +   +  VL AC+ +  +   ++IH   I+ G  S+L + NA++D+Y KC N+
Sbjct: 342 MRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNM 401

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + S  +F S++  + VSW ++I  Y  +G A +AL +F+ M  A++ S  +T  S L A 
Sbjct: 402 ENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRAC 461

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           ++ S +K   +++  I +  FN +  V +SL+D YA+CG +  A KVF  +   D++ W 
Sbjct: 462 ANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWN 521

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           S+I+A  LHGR   A++LF +M       + +TF++LL  C  +GL+N+G      M  D
Sbjct: 522 SIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMD 581

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
           +++ P  EHY C+V LLGRA  L +A +F+  +   P+  VW ALL +C VH N  LG  
Sbjct: 582 HRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRY 641

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
            A+K+L+++P +   YVL+SN++AA+    +V   R  MR  G+KK  G SW+EI  ++H
Sbjct: 642 AAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVH 701

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLA 772
           +F      H +   I   L  +  K  RE GYV     VLH+V+EEEK +ML+ HSERLA
Sbjct: 702 AFSVGSADHPDMRIINAMLEWLNLKASRE-GYVPDINVVLHDVDEEEKARMLWVHSERLA 760

Query: 773 IAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           +AYG+  +  G  IRI KNLR C+DCH+  K++S++  RE++VRD NRFHHFE G+CSCG
Sbjct: 761 LAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCG 820

Query: 833 DYW 835
           DYW
Sbjct: 821 DYW 823



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 168/593 (28%), Positives = 296/593 (49%), Gaps = 7/593 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +  A +LFD + +R   ++  ++  Y   GE    LE + R++  G  V+ F  
Sbjct: 92  YAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVL 151

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++K    +        IH    K G+D   F+  +L+  Y+ C     AR +FD +  
Sbjct: 152 TTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVG 211

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D V W +++S YS +     AL  F +M+  G   N +   +AL+A    S   LG  
Sbjct: 212 K-DAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKG 270

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH  +VK+  + + +V  AL+ MYA+CG + +A  +   + + D + W+ +++ + Q+  
Sbjct: 271 IHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQ 330

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A + F  +  +   P++      + A   +  L  G+++H  AIK G+ S+L +GN 
Sbjct: 331 NEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNA 390

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           LMDMYAKC  +     +F  +   + +SW TII GY Q+     AL +F  ++   + + 
Sbjct: 391 LMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLST 450

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFE 420
            +   SVL AC+    +    +IH  I +    +D ++ N+++D Y KCG I  +  VFE
Sbjct: 451 QVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFE 510

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
           SI   DVVSW S+IS+Y  +G A  ALELF  MN+++++++ +T VS LS   S  ++ +
Sbjct: 511 SIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQ 570

Query: 481 GKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANK-VFNCVQTKDLILWTSMINAN 538
           G  L N  ++           + +V +  R G L  A K + +   T   ++W +++++ 
Sbjct: 571 GLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSC 630

Query: 539 GLHGRGKVAIDLFYKMEAESFAP-DHITFLALLYACSHSGLINEGKKFLEIMR 590
            +H    VA+  +   +     P D  T++ L    + +G+++E   + + MR
Sbjct: 631 VVH--KNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMR 681



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 166/328 (50%), Gaps = 9/328 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + DA  +F+ +    V  W+ ++  Y  + +  +  E + RM    +  + F+
Sbjct: 293 MYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFS 352

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++ACA +  L+ G +IH L +K GY+S  F+ N+L+ MYAKC +   + ++F  + 
Sbjct: 353 LSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQ 412

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  +V  WN+II  Y  SG   +AL +F EM+   +++   TF + L+AC ++S     +
Sbjct: 413 DANEVS-WNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAV 471

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH+   KS  N    V N+LI  YA+CG + +A  V   +   D VSWNS+++ +  + 
Sbjct: 472 QIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHG 531

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++ F  +  +  K + V  V+ +S  G  G +  G  L         + D +I  
Sbjct: 532 RATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLF-----NSMMMDHRIKP 586

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           + M+ Y   C V  +GR      A  FI
Sbjct: 587 S-MEHYT--CIVRLLGRAGRLTDALKFI 611


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/679 (37%), Positives = 423/679 (62%), Gaps = 11/679 (1%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           +F A+L   + S+ +    +IHA  +  G     ++   LI   +  G +T A  V   L
Sbjct: 22  SFYASL--IDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDL 79

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
                  WN+++ G+ +N+ +  A+  + ++Q A   PD     + + A G L +L  G+
Sbjct: 80  PRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGR 139

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQ 339
            +HA   + GF +D+ + N L+ +YAKC  +     VF    +  +  +SWT I++ YAQ
Sbjct: 140 FVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQ 199

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDL 396
           N   ++ALE+F  ++   +  D + + SVL A + L+ + Q + IH  +++ GL    DL
Sbjct: 200 NGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDL 259

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           +I  ++  +Y KCG +  ++ +F+ ++S +++ W +MIS Y  NG A +A++LF+ M   
Sbjct: 260 LI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINK 317

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           +V  D+I++ SA+SA + +  L++ + ++ ++ R  +  +  ++S+L+DM+A+CG+++ A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECA 377

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             VF+    +D+++W++MI   GLHG+ + AI L+  ME +   P+ +TFL LL AC+HS
Sbjct: 378 RSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHS 437

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           G++ EG  F   M  D++++P  +HYAC++DLLGRA HL++AY+ ++ M ++P   VW A
Sbjct: 438 GMVREGWWFFNRM-ADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL AC+ H + ELG+  A++L  +DP N G+YV +SN++AA+R W  V +VR+RM+  GL
Sbjct: 497 LLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGL 556

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
            K  G SW+E+  ++  F   DKSH   +EI +++  I  +L +EGG+VA     LH++ 
Sbjct: 557 NKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRL-KEGGFVANKDASLHDLN 615

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           +EE  + L  HSER+ IAYG++ + +G+ +RITKNLR CV+CH+  KL+S+L GRE+VVR
Sbjct: 616 DEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVR 675

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D NRFHHF+ GVCSCGDYW
Sbjct: 676 DTNRFHHFKDGVCSCGDYW 694



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 259/503 (51%), Gaps = 10/503 (1%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           +IH  +L  G   + F++  L+   +   D   ARQ+FD +  +  V  WN+II  YS +
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDL-PRPQVFPWNAIIRGYSRN 97

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
               +AL ++ +MQ   +  +++TF   L+AC   S   +G  +HA   + G    V+V 
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157

Query: 199 NALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           N LIA+YA+C ++  A  V     L  +  VSW ++++ + QN    +A++ F +++   
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            KPD V  V+ ++A   L +L  G+ +HA  +K G  ++  +  +L  MYAKC  V    
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            +F +M + + I W  +I+GYA+N     A++LF  +  + +  D + I S + AC+ + 
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVG 337

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            + Q + +  Y+ R     D+ I +A++D++ KCG+++ +R+VF+    +DVV W++MI 
Sbjct: 338 SLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIV 397

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  +G A EA+ L+  M    V  + +T +  L A +   ++++G      +     N 
Sbjct: 398 GYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINP 457

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMINANGLHGR---GKVAIDLF 551
           +    + ++D+  R G LD A +V  C+  +  + +W ++++A   H     GK A    
Sbjct: 458 QQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQL 517

Query: 552 YKMEAESFAPDHITFLALLYACS 574
           + ++  +    H   L+ LYA +
Sbjct: 518 FSIDPSNTG--HYVQLSNLYAAA 538



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/530 (26%), Positives = 271/530 (51%), Gaps = 34/530 (6%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A Q+FD + +  VF WNA++  Y  N      L  YS+M++  +S D+FTFP ++
Sbjct: 67  GDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLL 126

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-D 124
           KAC  L  L  G  +H  V + G+++  F+ N L+A+YAKC     AR +F+ +   E  
Sbjct: 127 KACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERT 186

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           +V W +I+SAY+ +G+ +EAL +F +M+++ +  +    V+ L A         G  IHA
Sbjct: 187 IVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHA 246

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
           + +K G   +  +  +L  MYA+CG++  A  +  ++++ + + WN+M++G+ +N     
Sbjct: 247 SVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKD 306

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  F E+     +PD +   +A+SA  ++G+L   + +  Y  +  +  D+ I + L+D
Sbjct: 307 AIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALID 366

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           M+AKC  V     VF +   +D + W+ +I GY  +    +A+ L+R ++ +G+  + + 
Sbjct: 367 MFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVT 426

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKG------LSDLVI------LNAIVDVYGKCGNI 412
              +L+AC+           H  ++R+G      ++D  I         I+D+ G+ G++
Sbjct: 427 FLGLLIACN-----------HSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHL 475

Query: 413 DYSRNVFESIESKD-VVSWTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSA 468
           D +  V + +  +  V  W +++S+   + H  L   A +  + ++ +N  +     +S 
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSN--TGHYVQLSN 533

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           L AA+ L    +  E+   +  KG N +  V  S V++  R     + +K
Sbjct: 534 LYAAARL--WDRVAEVRVRMKEKGLNKD--VGCSWVEVRGRLEGFRVGDK 579



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 112/236 (47%), Gaps = 2/236 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  A+ LFDK+    +  WNAM+  Y  NG     ++ +  M    +  D  +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTIS 325

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I ACA +  L+    +   V +  Y    FI ++L+ M+AKC     AR +FDR  
Sbjct: 326 ITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTL 385

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ DVV+W+++I  Y   GQ  EA+ L+R M+R G+  N  TF+  L AC  S     G 
Sbjct: 386 DR-DVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGW 444

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
                      N Q      +I +  R G + +A  V+  +  +  V+ W ++L+ 
Sbjct: 445 WFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/776 (35%), Positives = 430/776 (55%), Gaps = 99/776 (12%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           T++  F   LQ          G  +H   +K G +L VY+ N L+  YA+ G +  A  V
Sbjct: 8   TSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHV 67

Query: 218 -------------------------------LYQLENKDSVSWNSMLTGFVQNDLYCKAM 246
                                          LY++ + D VSW +++ G+ Q  L+  A+
Sbjct: 68  FDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAI 127

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
             F ++      P Q    N +S+      L  G+++H++ +K G  S + +  +L++MY
Sbjct: 128 WMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187

Query: 307 AKCCCVNYMGRVFYQMTAQ-------------------------------DFISWTTIIA 335
           AKC        VF +MT +                               D +SW ++I+
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247

Query: 336 GYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           GY+Q   +L+AL +F + +    L  D   + S+L AC+ L+ ++  K+IH YI+R    
Sbjct: 248 GYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307

Query: 395 ----------------------------------DLVILNAIVDVYGKCGNIDYSRNVFE 420
                                             +++   +++D Y K GN+  +R +F 
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFN 367

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  +DVV+WT+MI  YV NGL N+ALELF LM     E +S TL + LS +SSL+IL+ 
Sbjct: 368 KLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEH 427

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANG 539
           GK+++   I+ G +   SV ++L+ MYA+ G +++A +VF+     K+++ WTSMI A  
Sbjct: 428 GKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALA 487

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG GK AI+LF +M +    PDHIT++ +L AC+H GL+ +G+K+  +M   ++++P  
Sbjct: 488 QHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTL 547

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            HYAC++DL GRA  L+EAY F+ SM IEP    W +LL +C++H N +L ++ A++LL 
Sbjct: 548 SHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLL 607

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           +DPGN G Y+ ++NV++A  KW++  Q R  M+  G++K  G SWI I N++H+F   D 
Sbjct: 608 IDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDV 667

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H + DEIYK +AEI E++++  G++  T+ VLH++EEE K Q+L  HSE+LAIA+G+L 
Sbjct: 668 IHPQKDEIYKLMAEIWEEIKKM-GFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLN 726

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + E + +RI KNLRVC DCHS  K +S+L GRE++VRDA RFHHF+ G CSC DYW
Sbjct: 727 TPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 152/561 (27%), Positives = 246/561 (43%), Gaps = 108/561 (19%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---------------EPL------ 40
           Y K GS+  A  +FD++  ++ F+WN ++  Y   G               +P+      
Sbjct: 55  YAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAII 114

Query: 41  ----------RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYD 90
                       +  +++M    +    FT   V+ +CA  + LD G KIH  V+K G  
Sbjct: 115 VGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLG 174

Query: 91  STDFIVNSLVAMYAKCYDFRKARQLFDRMGEK---------------------------- 122
           S   +  SL+ MYAKC D   A+ +FDRM  K                            
Sbjct: 175 SCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKM 234

Query: 123 --EDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLG 179
              D+V WNS+IS YS  G  LEAL +F +M     L  + +T  + L AC +     +G
Sbjct: 235 PDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIG 294

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARC------------------------------- 208
            +IHA  +++       V NALI+MYA+                                
Sbjct: 295 KQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYT 354

Query: 209 --GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
             G +  A  +  +L ++D V+W +M+ G+VQN L+  A++ FR +   G +P+      
Sbjct: 355 KLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAA 414

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF-YQMTAQ 325
            +S S  L  L +GK++HA AIK G  S   + N L+ MYAK   +N   RVF      +
Sbjct: 415 MLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKK 474

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           + +SWT++I   AQ+    +A+ LF  +   G+  D +    VL AC+ +  + Q ++ +
Sbjct: 475 EIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYY 534

Query: 386 GYI-----IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS-YV 438
             +     I   LS    +   +D+YG+ G +  +    ES+    D ++W S+++S  +
Sbjct: 535 NMMTEVHEIEPTLSHYACM---IDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKI 591

Query: 439 HNG--LANEALELFYLMNEAN 457
           H    LA  A E   L++  N
Sbjct: 592 HKNADLAKVAAERLLLIDPGN 612



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 158/588 (26%), Positives = 262/588 (44%), Gaps = 103/588 (17%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +++    +KD   G  +H  ++K G     +++N+L+  YAK    R A  +FD M 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREM---------------QRVGLVTNA----- 160
            K     WN++IS Y+  G    +  L  EM                + GL  NA     
Sbjct: 73  LK-STFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFA 131

Query: 161 -----------YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
                      +T    L +C  +    +G +IH+  VK G    V VA +L+ MYA+CG
Sbjct: 132 KMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191

Query: 210 ----------KMTE---------------------AAGVLYQLENKDSVSWNSMLTGFVQ 238
                     +MT                      AA    ++ ++D VSWNSM++G+ Q
Sbjct: 192 DPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQ 251

Query: 239 NDLYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
                +A+  F + L     KPD     + +SA   L  L  GK++HAY ++    +   
Sbjct: 252 QGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311

Query: 298 IGNTLMDMYAKCCCVNY---------------------------MGRV------FYQMTA 324
           +GN L+ MYAK   V                             +G V      F ++  
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D ++WT +I GY QN     ALELFR +  EG + +   + ++L   S L  +   K+I
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431

Query: 385 HGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNGL 442
           H   I+ G S    + NA++ +Y K GNI+ ++ VF+     K++VSWTSMI +   +GL
Sbjct: 432 HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGL 491

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA-- 500
             EA+ LF  M    ++ D IT V  LSA + + ++++G++    ++ +   +E +++  
Sbjct: 492 GKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYN-MMTEVHEIEPTLSHY 550

Query: 501 SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA 547
           + ++D+Y R G L  A      +  + D I W S++ +  +H    +A
Sbjct: 551 ACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 216/484 (44%), Gaps = 92/484 (19%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------P---------- 39
           MY KCG  + A+ +FD+++ + + TWNA++  Y+ +G+           P          
Sbjct: 186 MYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSM 245

Query: 40  ----------LRVLETYSRM-RVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
                     L  L  +S+M     +  D FT   ++ ACA L+ L+ G +IH  +L+  
Sbjct: 246 ISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAE 305

Query: 89  YDSTDFIVNSLVAMYAKC---------------------------------YDFRKARQL 115
            +++  + N+L++MYAK                                   + + AR++
Sbjct: 306 TETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREI 365

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           F+++ ++ DVV W ++I  Y  +G   +AL LFR M   G   N+YT  A L      + 
Sbjct: 366 FNKLRDR-DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTI 424

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN--KDSVSWNSML 233
              G +IHA+ +K+G++    V NALIAMYA+ G +  A  V + L N  K+ VSW SM+
Sbjct: 425 LEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRV-FDLPNGKKEIVSWTSMI 483

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
               Q+ L  +A+  F  +   G KPD +  V  +SA   +G +  G++ +        +
Sbjct: 484 MALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYY------NMM 537

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA----------QDFISWTTIIAG-YAQNNC 342
           +++      +  YA  C ++  GR      A           D I+W +++A      N 
Sbjct: 538 TEVHEIEPTLSHYA--CMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNA 595

Query: 343 HLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEI---HGYIIRKGLSDLVI 398
            L  +   R + ++ G     + + +V  AC   +  +QT+++    G    KG+S + I
Sbjct: 596 DLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHI 655

Query: 399 LNAI 402
            N +
Sbjct: 656 KNEV 659


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/790 (34%), Positives = 434/790 (54%), Gaps = 19/790 (2%)

Query: 47  SRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC 106
           SR  +L +   A TFP +             A+ H  +++ GY      V  L       
Sbjct: 7   SRNTLLALISKACTFPHL-------------AETHAQLIRNGYQHDLATVTKLTQKLFDV 53

Query: 107 YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
              R AR LF  +  K D+ L+N +I  +S S            ++   L  + +T+  A
Sbjct: 54  GATRHARALFFSV-PKPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFA 112

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           + A  D   + LGM +HA  V  G +  ++VA+AL+ +Y +  ++  A  V  ++ ++D+
Sbjct: 113 ISASPD---DNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDT 169

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           V WN+M+TG V+N  Y  ++Q F+++   G + D       + A   +  +  G  +   
Sbjct: 170 VLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCL 229

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
           A+K GF  D  +   L+ +++KC  V+    +F  +   D +S+  +I+G++ N     A
Sbjct: 230 ALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECA 289

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDV 405
           ++ FR + + G       +  ++   S    +     I G+ ++ G +    +  A+  +
Sbjct: 290 VKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTI 349

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y +   ID +R +F+    K V +W +MIS Y  +GL   A+ LF  M       + +T+
Sbjct: 350 YSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTI 409

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S LSA + L  L  GK ++  I  K       V+++L+DMYA+CG +  A+++F+    
Sbjct: 410 TSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSE 469

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           K+ + W +MI   GLHG G  A+ LF +M    F P  +TFL++LYACSH+GL+ EG + 
Sbjct: 470 KNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEI 529

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
              M   Y+++P  EHYAC+VD+LGRA  LE+A +F+R M +EP   VW  LLGAC +H 
Sbjct: 530 FHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHK 589

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           +  L  + +++L ELDPGN G YVL+SN+++  R +     VR  ++   L KTPG + I
Sbjct: 590 DTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLI 649

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
           E+    H F+  D+SHS++  IY KL E+T K+ RE GY ++T   LH+VEEEEK  M  
Sbjct: 650 EVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKM-REMGYQSETVTALHDVEEEEKELMFN 708

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
            HSE+LAIA+G++ +  G+ IRI KNLRVC+DCH+  K +S++  R +VVRDANRFHHF+
Sbjct: 709 VHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFK 768

Query: 826 AGVCSCGDYW 835
            G+CSCGDYW
Sbjct: 769 DGICSCGDYW 778



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 224/464 (48%), Gaps = 7/464 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K   V  A ++FDK+  R    WN M+   V N      ++ +  M   G+ +D+ T
Sbjct: 147 LYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTT 206

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ A A ++++  G  I  L LK G+   D+++  L+++++KC D   AR LF  M 
Sbjct: 207 VATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFG-MI 265

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+V +N++IS +S +G+   A+  FRE+   G   ++ T V  +          L  
Sbjct: 266 RKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLAC 325

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            I    VKSG  LQ  V+ AL  +Y+R  ++  A  +  +   K   +WN+M++G+ Q+ 
Sbjct: 326 CIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSG 385

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L   A+  F+E+      P+ V   + +SA  +LG L  GK +H     +    ++ +  
Sbjct: 386 LTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVST 445

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  ++   ++F   + ++ ++W T+I GY  +    +AL+LF  +   G   
Sbjct: 446 ALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQP 505

Query: 361 DVMIIGSVLMACSGLKCMSQTKEI-HGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNV 418
             +   SVL ACS    + +  EI H  + +  +  L    A +VD+ G+ G ++ +   
Sbjct: 506 SSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEF 565

Query: 419 FE--SIESKDVVSWTSMISSYVH--NGLANEALELFYLMNEANV 458
                +E    V  T + +  +H    LA  A E  + ++  NV
Sbjct: 566 IRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNV 609


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 265/747 (35%), Positives = 433/747 (57%), Gaps = 10/747 (1%)

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            N++++ + K  D   AR LFD M ++  VV W  ++  Y+ +    EA  LFR+M R  
Sbjct: 82  TNTMISGHVKTGDVSSARDLFDAMPDRT-VVTWTILMGWYARNSHFDEAFKLFRQMCRSS 140

Query: 156 LVT--NAYTFVAALQACEDSSFETLGMEIHAATVKSG--QNLQVYVANALIAMYARCGKM 211
             T  +  TF   L  C D+  +    ++HA  VK G   N  + V+N L+  Y    ++
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  +  ++  KDSV++N+++TG+ ++ LY +++  F +++ +G +P        + A 
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             L +   G++LHA ++  GF  D  +GN ++D Y+K   V     +F +M   DF+S+ 
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH-GYIIR 390
            +I+ Y+Q + +  +L  FR +Q  G D       ++L   + L  +   +++H   ++ 
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380

Query: 391 KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
              S L + N++VD+Y KC   + +  +F+S+  +  VSWT++IS YV  GL    L+LF
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS-LVDMYAR 509
             M  +N+ +D  T  + L A++S + L  GK+L+ FIIR G NLE   + S LVDMYA+
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAK 499

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CG++  A +VF  +  ++ + W ++I+A+  +G G+ AI  F KM      PD ++ L +
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           L ACSH G + +G ++ + M   Y + P  +HYAC++DLLGR     EA + +  M  EP
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDP-GNPGNYVLISNVFAASRKWKDVEQVR 688
              +W ++L ACR+H N+ L E  A+KL  ++   +   YV +SN++AA+ +W+ V  V+
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
             MR  G+KK P  SW+E+ +KIH F + D++H   DEI +K+ E+T ++ERE GY   T
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE-GYKPDT 738

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
             V+ +V+E+ K++ L  HSERLA+A+ ++ + EG  I + KNLR C DCH+  KL+S++
Sbjct: 739 SSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKI 798

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
             RE+ VRD +RFHHF  GVCSCGDYW
Sbjct: 799 VKREITVRDTSRFHHFSEGVCSCGDYW 825



 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 157/551 (28%), Positives = 276/551 (50%), Gaps = 8/551 (1%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISV-DAFTF 61
           K G V  A  LFD +  RTV TW  ++G Y  N       + + +M R    ++ D  TF
Sbjct: 91  KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV--NSLVAMYAKCYDFRKARQLFDRM 119
             ++  C      +   ++H   +K G+D+  F+   N L+  Y +      A  LF+ +
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK D V +N++I+ Y   G   E++ LF +M++ G   + +TF   L+A        LG
Sbjct: 211 PEK-DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++HA +V +G +    V N ++  Y++  ++ E   +  ++   D VS+N +++ + Q 
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           D Y  ++ FFRE+Q  G           +S +  L +L  G++LH  A+     S L +G
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+DMYAKC        +F  +  +  +SWT +I+GY Q   H   L+LF  ++   L 
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNV 418
           AD     +VL A +    +   K++H +IIR G L ++   + +VD+Y KCG+I  +  V
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           FE +  ++ VSW ++IS++  NG    A+  F  M E+ ++ DS++++  L+A S    +
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFV 569

Query: 479 KKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
           ++G E         G   +    + ++D+  R G    A K+ + +    D I+W+S++N
Sbjct: 570 EQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLN 629

Query: 537 ANGLHGRGKVA 547
           A  +H    +A
Sbjct: 630 ACRIHKNQSLA 640



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 232/470 (49%), Gaps = 17/470 (3%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           LF+++ ++   T+N ++  Y  +G     +  + +MR  G     FTF  V+KA   L D
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
              G ++H L +  G+     + N ++  Y+K     + R LFD M E  D V +N +IS
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL-DFVSYNVVIS 324

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
           +YS + Q   +L  FREMQ +G     + F   L    + S   +G ++H   + +  + 
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            ++V N+L+ MYA+C    EA  +   L  + +VSW ++++G+VQ  L+   ++ F +++
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
           G+  + DQ      + AS    +LL GK+LHA+ I+ G + ++  G+ L+DMYAKC  + 
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
              +VF +M  ++ +SW  +I+ +A N     A+  F  +   GL  D + I  VL ACS
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564

Query: 374 -------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SK 425
                  G +       I+G   +K          ++D+ G+ G    +  + + +    
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKH-----YACMLDLLGRNGRFAEAEKLMDEMPFEP 619

Query: 426 DVVSWTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D + W+S++++   + +  LA  A E  + M +    +  +++ +  +AA
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAA 669



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 1/282 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            Y K   VL+   LFD++ +    ++N ++ +Y    +    L  +  M+ +G     F 
Sbjct: 294 FYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP 353

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++   A L  L  G ++H   L    DS   + NSLV MYAKC  F +A  +F  + 
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++   V W ++IS Y   G     L LF +M+   L  +  TF   L+A    +   LG 
Sbjct: 414 QRT-TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGK 472

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  ++SG    V+  + L+ MYA+CG + +A  V  ++ ++++VSWN++++    N 
Sbjct: 473 QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNG 532

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
               A+  F ++  +G +PD V  +  ++A    G +  G E
Sbjct: 533 DGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC    +AE +F  + QRT  +W A++  YV  G     L+ +++MR   +  D  T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+KA A    L  G ++H  +++ G     F  + LV MYAKC   + A Q+F+ M 
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ + V WN++ISA++ +G    A+G F +M   GL  ++ + +  L AC    F   G 
Sbjct: 515 DR-NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGT 573

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
           E   A +   G   +      ++ +  R G+  EA  ++ ++    D + W+S+L  
Sbjct: 574 EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/403 (20%), Positives = 169/403 (41%), Gaps = 44/403 (10%)

Query: 275 GNLLNGKELHAYAIKQGFVSD-----------LQIG--------------------NTLM 303
              L+ + + A  IK GF +D           L+ G                    NT++
Sbjct: 27  ATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMI 86

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV--QLEGLDAD 361
             + K   V+    +F  M  +  ++WT ++  YA+N+   +A +LFR +         D
Sbjct: 87  SGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPD 146

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD---LVILNAIVDVYGKCGNIDYSRNV 418
            +   ++L  C+     +   ++H + ++ G      L + N ++  Y +   +D +  +
Sbjct: 147 HVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVL 206

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           FE I  KD V++ ++I+ Y  +GL  E++ LF  M ++  +    T    L A   L   
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             G++L+   +  GF+ + SV + ++D Y++   +     +F+ +   D + +  +I++ 
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL--- 595
               + + ++  F +M+   F   +  F  +L   ++   +  G++    + C   L   
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ----LHCQALLATA 382

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           D        LVD+  +    EEA    +S+    T   W AL+
Sbjct: 383 DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALI 424


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 265/761 (34%), Positives = 432/761 (56%), Gaps = 8/761 (1%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           A+ H  ++  G+ +   ++  L    +       AR +F  + ++ DV L+N ++  +S 
Sbjct: 37  AQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV-QRPDVFLFNVLMRGFSV 95

Query: 138 SGQCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
           +     +L +F  +++   L  N+ T+  A+ A      +  G  IH   V  G + ++ 
Sbjct: 96  NESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           + + ++ MY +  ++ +A  V  ++  KD++ WN+M++G+ +N++Y +++Q FR+L    
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215

Query: 257 -QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
             + D    ++ + A   L  L  G ++H+ A K G  S   +    + +Y+KC  +   
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
             +F +    D +++  +I GY  N     +L LF+ + L G       + S++     L
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335

Query: 376 KCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
             +     IHGY ++   LS   +  A+  VY K   I+ +R +F+    K + SW +MI
Sbjct: 336 MLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           S Y  NGL  +A+ LF  M ++    + +T+   LSA + L  L  GK ++  +    F 
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
               V+++L+ MYA+CG++  A ++F+ +  K+ + W +MI+  GLHG+G+ A+++FY+M
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
                 P  +TFL +LYACSH+GL+ EG +    M   Y  +P  +HYAC+VD+LGRA H
Sbjct: 513 LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGH 572

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNV 674
           L+ A QF+ +M IEP + VW  LLGACR+H +  L   V++KL ELDP N G +VL+SN+
Sbjct: 573 LQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNI 632

Query: 675 FAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
            +A R +     VR   +   L K PG + IEIG   H F + D+SH +  EIY+KL ++
Sbjct: 633 HSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKL 692

Query: 735 TEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRV 794
             K+ RE GY  +T+  LH+VEEEE+  M+  HSERLAIA+G++ +  G+ IRI KNLRV
Sbjct: 693 EGKM-REAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRV 751

Query: 795 CVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           C+DCH+  KL+S++  R +VVRDANRFHHF+ GVCSCGDYW
Sbjct: 752 CLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 278/570 (48%), Gaps = 11/570 (1%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAFTFPCV 64
           G++  A  +F  V +  VF +N ++  +  N  P   L  ++ +R    +  ++ T+   
Sbjct: 66  GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           I A +  +D   G  IHG  +  G DS   + +++V MY K +    AR++FDRM EK D
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK-D 184

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGMEIH 183
            +LWN++IS Y  +   +E++ +FR++        +  T +  L A  +     LGM+IH
Sbjct: 185 TILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIH 244

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           +   K+G     YV    I++Y++CGK+   + +  +    D V++N+M+ G+  N    
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
            ++  F+EL  +G +      V+ V  SG L  +     +H Y +K  F+S   +   L 
Sbjct: 305 LSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALT 361

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
            +Y+K   +    ++F +   +   SW  +I+GY QN     A+ LFR +Q      + +
Sbjct: 362 TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPV 421

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            I  +L AC+ L  +S  K +H  +      S + +  A++ +Y KCG+I  +R +F+ +
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             K+ V+W +MIS Y  +G   EAL +FY M  + +    +T +  L A S   ++K+G 
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541

Query: 483 EL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMINANGL 540
           E+ N  I R GF       + +VD+  R G L  A +    +  +    +W +++ A  +
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           H    +A  +  K+      PD++ +  LL
Sbjct: 602 HKDTNLARTVSEKL--FELDPDNVGYHVLL 629



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 224/465 (48%), Gaps = 11/465 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS-VDAF 59
           MY K   V DA ++FD++ ++    WN M+  Y  N   +  ++ +  +     + +D  
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++ A A L++L  G +IH L  K G  S D+++   +++Y+KC   +    LF R 
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF-RE 281

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K D+V +N++I  Y+++G+   +L LF+E+   G    + T V+ +     S    L 
Sbjct: 282 FRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLI 338

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH   +KS       V+ AL  +Y++  ++  A  +  +   K   SWN+M++G+ QN
Sbjct: 339 YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN 398

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L   A+  FRE+Q +   P+ V     +SA  +LG L  GK +H       F S + + 
Sbjct: 399 GLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVS 458

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+ MYAKC  +    R+F  MT ++ ++W T+I+GY  +    +AL +F  +   G+ 
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYII-RKGLSDLVILNA-IVDVYGKCGNIDYSRN 417
              +    VL ACS    + +  EI   +I R G    V   A +VD+ G+ G++  +  
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ 578

Query: 418 VFE--SIESKDVVSWTSMISSYVH--NGLANEALELFYLMNEANV 458
             E  SIE    V  T + +  +H    LA    E  + ++  NV
Sbjct: 579 FIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNV 623


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 255/678 (37%), Positives = 409/678 (60%), Gaps = 6/678 (0%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           TF A L+ C   +    G  +HA     G   +   + AL  MY +C +  +A  V  ++
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG--AGQKPDQVCTVNAVSASGRLGNLLN 279
            ++D V+WN+++ G+ +N L   AM+    +QG   G++PD V  V+ + A      L  
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
            +E+HA+A++ G    + +   ++D Y KC  V     VF  M  ++ +SW  +I GYA 
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
           N    +A+ LF  +  EG+D     + + L AC  L  + + + +H  ++R GLS ++ +
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDV-VSWTSMISSYVHNGLANEALELFYLMNEAN 457
            NA++  Y KC   D +  VF  + +K   +SW +MI  +  N    +A  LF  M   N
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLEN 317

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           V  DS TLVS + A + +S   + + ++G+ IR   + +  V ++L+DMY++CG + IA 
Sbjct: 318 VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIAR 377

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           ++F+  + + +I W +MI+  G HG G+ A++LF +M+     P+  TFL++L ACSH+G
Sbjct: 378 RLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAG 437

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L++EG+K+   M+ DY L+P  EHY  +VDLLGRA  L+EA+ F+++M IEP   V+ A+
Sbjct: 438 LVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAM 497

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           LGAC++H N EL E  A+ + EL P     +VL++N++A +  WKDV +VR  M   GL+
Sbjct: 498 LGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQ 557

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           KTPG S I++ N++H+F +   +H  + +IY +LA++ E++ ++ GYV  T  + H+VE+
Sbjct: 558 KTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEI-KDMGYVPDTDSI-HDVED 615

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           + K Q+L  HSE+LAIAYG++++  G+ I+I KNLRVC DCH+  KL+S L GRE+++RD
Sbjct: 616 DVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRD 675

Query: 818 ANRFHHFEAGVCSCGDYW 835
             RFHHF+ G CSCGDYW
Sbjct: 676 IQRFHHFKDGKCSCGDYW 693



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 148/489 (30%), Positives = 246/489 (50%), Gaps = 9/489 (1%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  ++K CA   DL  G  +H  +   G  S      +L  MY KC     AR++FDRM
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQ--RVGLVTNAYTFVAALQACEDSSFET 177
             + D V WN++++ Y+ +G    A+     MQ    G   ++ T V+ L AC D+    
Sbjct: 78  PSR-DRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALH 136

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
              E+HA  +++G +  V V+ A++  Y +CG +  A  V   +  ++SVSWN+M+ G+ 
Sbjct: 137 ACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYA 196

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            N    +AM  F  +   G        + A+ A G LG L   + +H   ++ G  S++ 
Sbjct: 197 DNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVS 256

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQM-TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
           + N L+  YAKC   +   +VF ++   +  ISW  +I G+ QN C   A  LF  +QLE
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLE 316

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
            +  D   + SV+ A + +    Q + IHGY IR  L  D+ +L A++D+Y KCG +  +
Sbjct: 317 NVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIA 376

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           R +F+S   + V++W +MI  Y  +G    A+ELF  M       +  T +S L+A S  
Sbjct: 377 RRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436

Query: 476 SILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQTKDLILWT 532
            ++ +G++     ++K + LE  +    ++VD+  R G LD A + + N      + ++ 
Sbjct: 437 GLVDEGQKYFAS-MKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYG 495

Query: 533 SMINANGLH 541
           +M+ A  LH
Sbjct: 496 AMLGACKLH 504



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 206/423 (48%), Gaps = 16/423 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL--GISVDA 58
           MY KC    DA ++FD++  R    WNA++  Y  NG P   +E   RM+    G   D+
Sbjct: 60  MYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDS 119

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            T   V+ ACA  + L    ++H   L+ G D    +  +++  Y KC     AR +FD 
Sbjct: 120 VTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDC 179

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  +  V  WN++I  Y+ +G   EA+ LF  M + G+     + +AALQAC +  +   
Sbjct: 180 MPVRNSVS-WNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDE 238

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS-VSWNSMLTGFV 237
              +H   V+ G +  V V NALI  YA+C +   AA V  +L NK + +SWN+M+ GF 
Sbjct: 239 VRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFT 298

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN+    A + F  +Q    +PD    V+ + A   + + L  + +H Y+I+     D+ 
Sbjct: 299 QNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVY 358

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +   L+DMY+KC  V+   R+F     +  I+W  +I GY  +     A+ELF  ++  G
Sbjct: 359 VLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTG 418

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
              +     SVL ACS       G K  +  K+ +G  +  G+        +VD+ G+ G
Sbjct: 419 SLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYG--LEPGMEH---YGTMVDLLGRAG 473

Query: 411 NID 413
            +D
Sbjct: 474 KLD 476



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 176/363 (48%), Gaps = 10/363 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG+V  A  +FD +  R   +WNAM+  Y  NG     +  + RM   G+ V   + 
Sbjct: 164 YCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASV 223

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              ++AC  L  LD   ++H L+++ G  S   + N+L+  YAKC     A Q+F+ +G 
Sbjct: 224 LAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGN 283

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K+  + WN++I  ++ +    +A  LF  MQ   +  +++T V+ + A  D S       
Sbjct: 284 KKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARW 343

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH  +++   +  VYV  ALI MY++CG+++ A  +     ++  ++WN+M+ G+  +  
Sbjct: 344 IHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGF 403

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGN 300
              A++ F E++G G  P++   ++ ++A    G +  G++  A   K  G    ++   
Sbjct: 404 GQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYG 463

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           T++D+         +GR      A  FI    I  G +     L A +L + V+L    A
Sbjct: 464 TMVDL---------LGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESA 514

Query: 361 DVM 363
            ++
Sbjct: 515 QII 517



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 107/268 (39%), Gaps = 35/268 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  A +LFD    R V TWNAM+  Y S+G     +E +  M+  G   +  T
Sbjct: 366 MYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETT 425

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC+    +D G K    + K      D+ +   +  Y    D      L  R G
Sbjct: 426 FLSVLAACSHAGLVDEGQKYFASMKK------DYGLEPGMEHYGTMVD------LLGRAG 473

Query: 121 EKEDVVLWNSI--------ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           + ++   W+ I        IS Y A       LG  +  + V L   +   +  L   E+
Sbjct: 474 KLDEA--WSFIKNMPIEPGISVYGA------MLGACKLHKNVELAEESAQIIFEL-GPEE 524

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
             +  L   I+A       ++   VA    AM  +  + T    ++ QL+N+    ++  
Sbjct: 525 GVYHVLLANIYA-----NASMWKDVARVRTAMEKKGLQKTPGWSII-QLKNEVHTFYSGS 578

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPD 260
                  D+Y +  +   E++  G  PD
Sbjct: 579 TNHQHAKDIYARLAKLIEEIKDMGYVPD 606


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 284/787 (36%), Positives = 446/787 (56%), Gaps = 12/787 (1%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++K C   K+   G  +H  +          ++NSL+ +Y+K  D   A  +F  M
Sbjct: 54  TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113

Query: 120 -GEKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFET 177
              K DVV ++SIIS ++ +  CL+A+ +F ++  + G+  N Y F A ++AC    F  
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173

Query: 178 LGMEIHAATVKSGQ-NLQVYVANALIAMYAR---CGKMTEAAGVLYQLENKDSVSWNSML 233
            G+ +    +K+G  +  V V   LI M+ +      +  A  V  ++  K+ V+W  M+
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMI 233

Query: 234 TGFVQNDLYCKAMQFFRE-LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           T   Q     +A+  F E L  +G  PD+      +S    +  L  GKELH++ I+ G 
Sbjct: 234 TRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGL 293

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC--HLKALELF 350
           V DL +G +L+DMYAKC  V    +VF  M   + +SWT ++ GY +       +A+ +F
Sbjct: 294 VLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMF 353

Query: 351 RTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGK 408
             + L+G +  +      VL AC+ L      +++HG  I+ GLS +  + N +V VY K
Sbjct: 354 SNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAK 413

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
            G ++ +R  F+ +  K++VS T +  + V +   N   +L   +        S T  S 
Sbjct: 414 SGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASL 473

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           LS A+ +  + KG++++  +++ GF  + SV ++L+ MY++CG  + A +VFN ++  ++
Sbjct: 474 LSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNV 533

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
           I WTS+IN    HG    A++LFY M      P+ +T++A+L ACSH GLI+E  K    
Sbjct: 534 ITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTS 593

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           MR ++ + P  EHYAC+VDLLGR+  L EA +F+ SM  +  A VW   LG+CRVH N +
Sbjct: 594 MRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTK 653

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
           LGE  AK +LE +P +P  Y+L+SN++A   +W+DV  +R  M+   + K  GSSWIE+ 
Sbjct: 654 LGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVE 713

Query: 709 NKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHS 768
           N++H F   D  H ++ +IY+KL E+  K+ +  GYV  T FVLH+VE+E+K Q L+ HS
Sbjct: 714 NQVHKFHVGDTLHPKAQQIYEKLDELALKI-KNVGYVPNTDFVLHDVEDEQKEQYLFQHS 772

Query: 769 ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
           E+LA+A+ ++ +     IR+ KNLRVC DCH+  K +S + GRE+VVRDANRFHH + G 
Sbjct: 773 EKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGT 832

Query: 829 CSCGDYW 835
           CSC DYW
Sbjct: 833 CSCNDYW 839



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 161/589 (27%), Positives = 291/589 (49%), Gaps = 20/589 (3%)

Query: 1   MYGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVD 57
           +Y K    + A  +F  +  S+R V ++++++  + +N   L+ +E + ++ +  G+  +
Sbjct: 96  LYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPN 155

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY-DSTDFIVNSLVAMYAK---CYDFRKAR 113
            + F  VI+AC        G  + G VLK GY DS   +   L+ M+ K     D   AR
Sbjct: 156 EYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESAR 215

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACED 172
           ++FD+M EK +VV W  +I+  +  G   EA+ LF EM    G V + +T    +  C +
Sbjct: 216 KVFDKMREK-NVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAE 274

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
             F +LG E+H+  ++SG  L + V  +L+ MYA+CG + EA  V   +   + +SW ++
Sbjct: 275 IQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTAL 334

Query: 233 LTGFVQ--NDLYCKAMQFFRE--LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           + G+V+       +AM+ F    LQG G  P+       + A   L +   G+++H   I
Sbjct: 335 VNGYVRGGGGYEREAMRMFSNMLLQG-GVAPNCFTFSGVLKACASLPDFDFGEQVHGQTI 393

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K G  +   +GN L+ +YAK   +    + F  +  ++ +S T +     ++       +
Sbjct: 394 KLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQD 453

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYG 407
           L R V+  G         S+L   + +  + + ++IH  +++ G  +DL + NA++ +Y 
Sbjct: 454 LDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYS 513

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KCGN + +  VF  +E  +V++WTS+I+ +  +G A++ALELFY M E  V+ + +T ++
Sbjct: 514 KCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIA 573

Query: 468 ALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-T 525
            LSA S + ++ +  K         G        + +VD+  R G L  A +  N +   
Sbjct: 574 VLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFD 633

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKM--EAESFAPDHITFLALLYA 572
            D ++W + + +  +H   K+  +   KM  E E   P     L+ LYA
Sbjct: 634 ADALVWRTFLGSCRVHRNTKLG-EHAAKMILEREPHDPATYILLSNLYA 681


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 255/658 (38%), Positives = 411/658 (62%), Gaps = 4/658 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALI--AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           EIHA  +K+   L+  VA  L+  A       M  A  +  Q++  DS ++N M+ GF  
Sbjct: 42  EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTL 101

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                +A+  F+E+     +PD+      +    RL  L  G+++HA  +K GF S   +
Sbjct: 102 KQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFV 161

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            NTL+ MYA C  V    RVF +M+ ++  +W ++ AGY ++    + ++LF  +    +
Sbjct: 162 KNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDI 221

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D + + SVL AC  L  +   + I+ Y+  KGL  +  ++ ++VD+Y KCG +D +R 
Sbjct: 222 RFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARR 281

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F+ ++ +DVV+W++MIS Y       EAL+LF+ M +AN++ + IT+VS LS+ + L  
Sbjct: 282 LFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGA 341

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L+ GK ++ FI +K   L  ++ ++L+D YA+CG+++ + +VF  +  K+++ WT +I  
Sbjct: 342 LETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQG 401

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              +G+GK A++ FY M  ++  P+ +TF+ +L ACSH+GL++EG+     M  D+ ++P
Sbjct: 402 LASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEP 461

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHY C+VD+LGRA  +EEA+QF+++M I+P A +W  LL +C+VH N E+GE   K+L
Sbjct: 462 RIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQL 521

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           + L+P + G+Y+L+SN++A+  +W+D  +VR  M+  G+KKTPG S IE+   IH F A 
Sbjct: 522 IILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAE 581

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D  HS+S+EIY  + ++ +++ +  GYV  T     + EE++K   +  HSE+LAIA+G+
Sbjct: 582 DNVHSQSEEIYNAIEDMMKQI-KSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGL 640

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +KS  G+ IRITKNLRVC DCH+  KLVS++F RE+VVRD  RFHHF+ G CSC DYW
Sbjct: 641 IKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 262/487 (53%), Gaps = 17/487 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKC----GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +++ C  ++DL+   +IH  ++K          + ++ S   +     D+  A  +F ++
Sbjct: 30  ILEQCKTIRDLN---EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDY--AVSIFRQI 84

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E  D   +N +I  ++      EA+ LF+EM    +  + +TF   L+ C      + G
Sbjct: 85  DEP-DSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEG 143

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IHA  +K G     +V N LI MYA CG++  A  V  ++  ++  +WNSM  G+ ++
Sbjct: 144 EQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKS 203

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             + + ++ F E+     + D+V  V+ ++A GRL +L  G+ ++ Y  ++G   +  + 
Sbjct: 204 GNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLI 263

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            +L+DMYAKC  V+   R+F QM  +D ++W+ +I+GY+Q +   +AL+LF  +Q   +D
Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANID 323

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNV 418
            + + + S+L +C+ L  +   K +H +I +K +   V L  A++D Y KCG+++ S  V
Sbjct: 324 PNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEV 383

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  +  K+V+SWT +I     NG   +ALE FYLM E NVE + +T +  LSA S   ++
Sbjct: 384 FGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLV 443

Query: 479 KKGKELNGFI-IRKGFNLEGSVA--SSLVDMYARCGALDIANK-VFNCVQTKDLILWTSM 534
            +G++L  F+ + + F +E  +     +VD+  R G ++ A + + N     + ++W ++
Sbjct: 444 DEGRDL--FVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTL 501

Query: 535 INANGLH 541
           + +  +H
Sbjct: 502 LASCKVH 508



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 227/430 (52%), Gaps = 6/430 (1%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F ++ +     +N M+  +     P   +  +  M    +  D FTFPC++K C+ 
Sbjct: 77  AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L+ L  G +IH L++KCG+ S  F+ N+L+ MYA C +   AR++FD M E+ +V  WNS
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSER-NVRTWNS 195

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           + + Y+ SG   E + LF EM  + +  +  T V+ L AC   +   LG  I+    + G
Sbjct: 196 MFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKG 255

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
                 +  +L+ MYA+CG++  A  +  Q++ +D V+W++M++G+ Q     +A+  F 
Sbjct: 256 LKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFH 315

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           E+Q A   P+++  V+ +S+   LG L  GK +H +  K+     + +G  LMD YAKC 
Sbjct: 316 EMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCG 375

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA-DVMIIGSVL 369
            V     VF +M  ++ +SWT +I G A N    KALE F  +  + ++  DV  IG VL
Sbjct: 376 SVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIG-VL 434

Query: 370 MACSGLKCMSQTKEIHGYIIRK-GLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIE-SKD 426
            ACS    + + +++   + R  G+   +     +VD+ G+ G I+ +    +++    +
Sbjct: 435 SACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPN 494

Query: 427 VVSWTSMISS 436
            V W ++++S
Sbjct: 495 AVIWRTLLAS 504



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 205/432 (47%), Gaps = 12/432 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG V  A ++FD++S+R V TWN+M   Y  +G    V++ +  M  L I  D  T
Sbjct: 168 MYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVT 227

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  L DL+ G  I+  V + G      ++ SLV MYAKC     AR+LFD+M 
Sbjct: 228 LVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQM- 286

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ DVV W+++IS YS + +C EAL LF EMQ+  +  N  T V+ L +C        G 
Sbjct: 287 DRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGK 346

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    K    L V +  AL+  YA+CG +  +  V  ++  K+ +SW  ++ G   N 
Sbjct: 347 WVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNG 406

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIG 299
              KA+++F  +     +P+ V  +  +SA    G +  G++L     +  G    ++  
Sbjct: 407 QGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHY 466

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALELFRTVQLEG 357
             ++D+  +   +    +    M  Q + + W T++A      N  +    L + + LE 
Sbjct: 467 GCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEP 526

Query: 358 LDADVMIIGSVLMACSG-----LKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
             +   I+ S + A  G     LK   + KE  G     G S L+ L+ ++  +    N+
Sbjct: 527 THSGDYILLSNIYASVGRWEDALKVRGEMKE-KGIKKTPGCS-LIELDGVIHEFFAEDNV 584

Query: 413 -DYSRNVFESIE 423
              S  ++ +IE
Sbjct: 585 HSQSEEIYNAIE 596


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/715 (36%), Positives = 434/715 (60%), Gaps = 12/715 (1%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRVG--LVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
           N++I+A+S +     A  L R +         + +TF + ++A   ++      ++HA  
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNASAA---QLHACA 93

Query: 187 VKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
           ++ G     V+ + +L+  Y R G+++EA  V  ++  +D  +WN+ML+G  +N    +A
Sbjct: 94  LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           +  F  + G G   D V   + +     LG+ +    +H YA+K G   +L + N L+D+
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDV 213

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
           Y K   +     VF+ M  +D ++W +II+G  Q      AL++F+ ++  G+  DV+ +
Sbjct: 214 YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTL 273

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
            S+  A +        K +H Y++R+G  + D++  NAIVD+Y K  NI+ ++ +F+S+ 
Sbjct: 274 VSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMP 333

Query: 424 SKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSLSILKKGK 482
            +D VSW ++I+ Y+ NGLANEA+E + ++     +++   T VS L A S L  L++G 
Sbjct: 334 VQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGM 393

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
            ++   I+ G N++  V + L+D+YA+CG L  A  +F  +  +    W ++I+  G+HG
Sbjct: 394 RMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHG 453

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
            G  A+ LF +M+ E   PDH+TF++LL ACSH+GL+++G+ F ++M+  Y + P  +HY
Sbjct: 454 HGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHY 513

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
           AC+ D+LGRA  L+EA+ F+++M I+P + VW ALLGACR+H N E+G++ ++ L ELDP
Sbjct: 514 ACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDP 573

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS-- 720
            N G YVL+SN++A   KW  V++VR  +R   L+KTPG S IE+   ++ F + +++  
Sbjct: 574 ENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEP 633

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H + +EI  +L  +  K+ R  GYV+   FVL +VE++EK  +L  HSERLAIA+G++ +
Sbjct: 634 HPQHEEIQAELRSLLAKI-RSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINT 692

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
              + + I KNLRVC DCH+  K +S++  RE++VRD+NRFHHF+ G CSCGD+W
Sbjct: 693 PSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 159/512 (31%), Positives = 267/512 (52%), Gaps = 15/512 (2%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY-DSTDFIVNSLVAMYAKCYDFRKARQL 115
           D FTFP +I+A          A++H   L+ G    + F   SLV  Y +     +A ++
Sbjct: 69  DGFTFPSLIRAA---PSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKV 125

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M E+ DV  WN+++S    + +  EA+GLF  M   G+  +  T  + L  C     
Sbjct: 126 FDEMSER-DVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGD 184

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           + L + +H   VK G + +++V NALI +Y + G + EA  V + +E +D V+WNS+++G
Sbjct: 185 QVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISG 244

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VS 294
             Q      A++ F+ ++G+G  PD +  V+  SA  + G+  + K LH Y +++G+ V 
Sbjct: 245 CEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVD 304

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D+  GN ++DMYAK   +    R+F  M  QD +SW T+I GY QN    +A+E +  +Q
Sbjct: 305 DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQ 364

Query: 355 L-EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
             EGL A      SVL A S L  + Q   +H   I+ GL+ D+ +   ++D+Y KCG +
Sbjct: 365 KHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKL 424

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             +  +FE +  +    W ++IS    +G   EAL LF  M +  ++ D +T VS L+A 
Sbjct: 425 AEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAAC 484

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQTKDLI 529
           S   ++ +G+     +++  +++       + + DM  R G LD A N + N     D  
Sbjct: 485 SHAGLVDQGRSFFD-VMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSA 543

Query: 530 LWTSMINANGLHGR---GKVAIDLFYKMEAES 558
           +W +++ A  +HG    GKVA    ++++ E+
Sbjct: 544 VWGALLGACRIHGNVEMGKVASQNLFELDPEN 575



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 219/442 (49%), Gaps = 10/442 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G + +A ++FD++S+R V  WNAML     N      +  + RM   G++ D  T 
Sbjct: 113 YLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTV 172

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+  C +L D      +H   +K G D   F+ N+L+ +Y K     +A+ +F  M E
Sbjct: 173 SSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGM-E 231

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D+V WNSIIS     GQ   AL +F+ M+  G+  +  T V+   A            
Sbjct: 232 CRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKS 291

Query: 182 IHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +H   ++ G ++   +A NA++ MYA+   +  A  +   +  +DSVSWN+++TG++QN 
Sbjct: 292 LHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNG 351

Query: 241 LYCKAMQFFRELQG-AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           L  +A++ +  +Q   G K  Q   V+ + A   LG L  G  +HA +IK G   D+ +G
Sbjct: 352 LANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVG 411

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+D+YAKC  +     +F +M  +    W  II+G   +    +AL LF  +Q EG+ 
Sbjct: 412 TCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIK 471

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA----IVDVYGKCGNIDYS 415
            D +   S+L ACS    + Q +    + + +   D+V +      + D+ G+ G +D +
Sbjct: 472 PDHVTFVSLLAACSHAGLVDQGRSF--FDVMQVTYDIVPIAKHYACMADMLGRAGQLDEA 529

Query: 416 RNVFESIESK-DVVSWTSMISS 436
            N  +++  K D   W +++ +
Sbjct: 530 FNFIQNMPIKPDSAVWGALLGA 551



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 148/285 (51%), Gaps = 3/285 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGK G + +A+ +F  +  R + TWN+++      G+    L+ +  MR  G+S D  T
Sbjct: 213 VYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLT 272

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRM 119
              +  A A   D      +H  V++ G+D  D I  N++V MYAK  +   A+++FD M
Sbjct: 273 LVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSM 332

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETL 178
              +D V WN++I+ Y  +G   EA+  +  MQ+  GL     TFV+ L A         
Sbjct: 333 -PVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQ 391

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           GM +HA ++K G N+ VYV   LI +YA+CGK+ EA  +  ++  + +  WN++++G   
Sbjct: 392 GMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGV 451

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           +    +A+  F  +Q  G KPD V  V+ ++A    G +  G+  
Sbjct: 452 HGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSF 496



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 3/136 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + +A  LF+K+ +R+   WNA++     +G     L  +SRM+  GI  D  T
Sbjct: 417 LYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVT 476

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN--SLVAMYAKCYDFRKARQLFDR 118
           F  ++ AC+    +D G      V++  YD      +   +  M  +     +A      
Sbjct: 477 FVSLLAACSHAGLVDQGRSFFD-VMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQN 535

Query: 119 MGEKEDVVLWNSIISA 134
           M  K D  +W +++ A
Sbjct: 536 MPIKPDSAVWGALLGA 551


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 273/818 (33%), Positives = 466/818 (56%), Gaps = 8/818 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YG  G V DA++LF ++ +R V +W A++ A  SNG     L  Y +MR  G+  +A  
Sbjct: 88  LYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANA 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+  C  L++   G ++   V+  G  +   + NSL+ M+        A +LFDRM 
Sbjct: 148 FATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRM- 206

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D + WN++IS YS  G C +   +F +M+  GL  +A T  + +  C  S   + G 
Sbjct: 207 EEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGS 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH+  ++S  +  V V NAL+ MY+  GK+++A  + + +  +D +SWN+M++ +VQN 
Sbjct: 267 GIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNC 326

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++   +L    + P+ +   +A+ A    G L++GK +HA  ++     +L +GN
Sbjct: 327 NSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGN 386

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MY KC  +    +VF  M   D +S+  +I GYA      KA+++F  ++  G+  
Sbjct: 387 SLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKP 446

Query: 361 DVMIIGSVLMA-CSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNV 418
           + + + ++  +  S     +  + +H YIIR G LSD  + N+++ +Y KCGN++ S N+
Sbjct: 447 NYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNI 506

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F SI +K++VSW ++I++ V  G   EAL+LF  M  A  + D + L   LS+ +SL+ L
Sbjct: 507 FNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASL 566

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           ++G +L+G  ++ G + +  V ++ +DMY +CG +D   +V      +    W ++I+  
Sbjct: 567 EEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGY 626

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             +G  K A + F +M A    PD++TF+ALL ACSH+GL+++G  +   M   + + P 
Sbjct: 627 AKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPG 686

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            +H  C+VDLLGR     EA +F+  M + P   +W +LL + R H N E+G   AKKLL
Sbjct: 687 IKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLL 746

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           ELDP +   YVL+SN++A + +W DV+++R  M+   + K P  SW+++ N++ +F   D
Sbjct: 747 ELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGD 806

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           + H  +++IY KL E+  KL RE GY+A T   LH+ +EE+K Q L+ HSE+LA+AYG++
Sbjct: 807 RGHKHAEKIYAKLDEMLLKL-REVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLI 865

Query: 779 ----KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
                ST+GS +  + ++  C++   +  L   L+ ++
Sbjct: 866 VVPEGSTQGSAVNTSSSIDACLEPSMYNHLFGDLWSQQ 903



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 170/627 (27%), Positives = 315/627 (50%), Gaps = 10/627 (1%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML---KDL 74
           ++ RT  TW   +   V  G      E    MR  G+ +  F    ++ AC      + +
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 75  DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
            CGA IH L  + G     +I  +L+ +Y        A++LF  M E+ +VV W +++ A
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPER-NVVSWTALMVA 119

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
            S++G   EAL  +R+M+R G+  NA  F   +  C     E  G+++ +  + SG   Q
Sbjct: 120 LSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQ 179

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V VAN+LI M+   G++ +A  +  ++E  D++SWN+M++ +    +  K    F +++ 
Sbjct: 180 VSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRH 239

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G +PD     + +S      +  +G  +H+  ++    S + + N L++MY+    ++ 
Sbjct: 240 HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSD 299

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
              +F+ M+ +D ISW T+I+ Y QN     AL+    +       + +   S L ACS 
Sbjct: 300 AEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSS 359

Query: 375 LKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
              +   K +H  +++  L  +L++ N+++ +YGKC +++ +  VF+S+ + D+VS+  +
Sbjct: 360 PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVL 419

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSAL-SAASSLSILKKGKELNGFIIRKG 492
           I  Y       +A+++F  M  A ++ + IT+++   S ASS  +   G+ L+ +IIR G
Sbjct: 420 IGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTG 479

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           F  +  VA+SL+ MYA+CG L+ +  +FN +  K+++ W ++I AN   G G+ A+ LF 
Sbjct: 480 FLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFI 539

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGR 611
            M+      D +     L +C+    + EG +   + M+     D +  + A  +D+ G+
Sbjct: 540 DMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAA--MDMYGK 597

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALL 638
              ++E  Q V    I P  + W  L+
Sbjct: 598 CGKMDEMLQVVPDQAIRPQ-QCWNTLI 623



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 139/579 (24%), Positives = 275/579 (47%), Gaps = 18/579 (3%)

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE---TLGMEIHA 184
           W + +S     G+   A  + R M+  G+  + +   + + ACE    +     G  IHA
Sbjct: 9   WYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHA 68

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
            T ++G    VY+  AL+ +Y   G +++A  + +++  ++ VSW +++     N    +
Sbjct: 69  LTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEE 128

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A++ +R+++  G   +       VS  G L N + G ++ +  I  G  + + + N+L+ 
Sbjct: 129 ALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLIT 188

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           M+     V+   ++F +M   D ISW  +I+ Y+      K   +F  ++  GL  D   
Sbjct: 189 MFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATT 248

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + S++  C+     S    IH   +R  L S + ++NA+V++Y   G +  +  +F ++ 
Sbjct: 249 LCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMS 308

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            +D++SW +MISSYV N  + +AL+    +   N   + +T  SAL A SS   L  GK 
Sbjct: 309 RRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKM 368

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++  +++        V +SL+ MY +C +++ A KVF  + T D++ +  +I    +   
Sbjct: 369 VHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLED 428

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYA-CSHSGLINEGKKFLE-IMRCDYQLDPWPEH 601
           G  A+ +F  M +    P++IT + +  +  S + L N G+     I+R  +  D +  +
Sbjct: 429 GTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVAN 488

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL--GEIVAKKLLE 659
              L+ +  +  +LE +     S+  +     W A++ A     N +L  GE   K  ++
Sbjct: 489 --SLITMYAKCGNLESSTNIFNSITNKNIVS-WNAIIAA-----NVQLGHGEEALKLFID 540

Query: 660 LD-PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           +   GN  + V ++   ++      +E+  M++ G G+K
Sbjct: 541 MQHAGNKLDRVCLAECLSSCASLASLEE-GMQLHGLGMK 578


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 253/635 (39%), Positives = 393/635 (61%), Gaps = 26/635 (4%)

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           S++W  ++  +  + L   ++  F  L+  G  PD+    + + AS    +    + LHA
Sbjct: 41  SLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHA 100

Query: 286 YAIKQGFVSDLQIGNTLMDMYAK----------------------CCCVNYMGRVFYQMT 323
             I+ GF  DL   N LM+MY+K                         ++ + ++F +M 
Sbjct: 101 AVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMP 160

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
            +D +SW T+IAG AQN  + +AL + + +  E L  D   + S+L   +    +++ KE
Sbjct: 161 VRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKE 220

Query: 384 IHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           IHGY IR G   D+ I ++++D+Y KC  ++ S   F  + ++D +SW S+I+  V NG 
Sbjct: 221 IHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGR 280

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
            ++ L  F  M +  V+   ++  S + A + L+ L  GK+L+ +IIR GF+    +ASS
Sbjct: 281 FDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASS 340

Query: 503 LVDMYARCGALDIANKVFNCVQT--KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           L+DMYA+CG + +A  +FN ++   +D++ WT++I    +HG    A+ LF +M  +   
Sbjct: 341 LLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVK 400

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
           P ++ F+A+L ACSH+GL++EG K+   M+ D+ + P  EHYA + DLLGRA  LEEAY 
Sbjct: 401 PCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYD 460

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
           F+ +M  EPT  VW  LL ACR H N EL E V  K+L +DPGN G +V++SN+++A+++
Sbjct: 461 FISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQR 520

Query: 681 WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
           W+D  ++R+RMR +GLKKTP  SWIE+GNK+H+F+A DKSH   D+I + L  + E++E+
Sbjct: 521 WRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEK 580

Query: 741 EGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHS 800
           E GYV  T  VLH+V+EE K  +L  HSERLAIA+G++ +T G+ IR+ KN+RVCVDCH+
Sbjct: 581 E-GYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHT 639

Query: 801 FCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             K ++++ GRE++VRD +RFHHF+ G CSCGDYW
Sbjct: 640 AIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 227/445 (51%), Gaps = 38/445 (8%)

Query: 24  FTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGL 83
             W  ++  Y S+G     L +++ +R  GIS D   FP +++A  + K  +    +H  
Sbjct: 42  LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 84  VLKCGYDSTDFIVNSLVAMYAK-------CYDFRKAR---------------QLFDRMGE 121
           V++ G+    +  N+L+ MY+K        ++F +AR               +LFDRM  
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV WN++I+  + +G   EAL + +EM +  L  +++T  + L    + +  T G E
Sbjct: 162 R-DVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKE 220

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   ++ G +  V++ ++LI MYA+C ++  +    + L N+D++SWNS++ G VQN  
Sbjct: 221 IHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGR 280

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           + + + FFR +     KP QV   + + A   L  L  GK+LHAY I+ GF  +  I ++
Sbjct: 281 FDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASS 340

Query: 302 LMDMYAKCCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           L+DMYAKC  +     +F   +M  +D +SWT II G A +   L A+ LF  + ++G+ 
Sbjct: 341 LLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVK 400

Query: 360 ADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
              +   +VL ACS       G K  +  +   G  +  GL       A+ D+ G+ G +
Sbjct: 401 PCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFG--VAPGLEHYA---AVADLLGRAGRL 455

Query: 413 DYSRNVFESIESKDVVS-WTSMISS 436
           + + +   ++  +   S W++++++
Sbjct: 456 EEAYDFISNMGEEPTGSVWSTLLAA 480



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 23/338 (6%)

Query: 12  EQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML 71
            +LFD++  R V +WN ++     NG     L     M    +  D+FT   ++      
Sbjct: 153 RKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEH 212

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
            ++  G +IHG  ++ G+D   FI +SL+ MYAKC     +   F  +  + D + WNSI
Sbjct: 213 ANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNR-DAISWNSI 271

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           I+    +G+  + LG FR M +  +     +F + + AC   +   LG ++HA  ++ G 
Sbjct: 272 IAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGF 331

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           +   ++A++L+ MYA+CG +  A  +  ++E  ++D VSW +++ G   +     A+  F
Sbjct: 332 DDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLF 391

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDLQIGNTLMDMYAK 308
            E+   G KP  V  +  ++A    G +  G K  ++     G    L+    + D+   
Sbjct: 392 EEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADL--- 448

Query: 309 CCCVNYMGRVFYQMTAQDFIS----------WTTIIAG 336
                 +GR      A DFIS          W+T++A 
Sbjct: 449 ------LGRAGRLEEAYDFISNMGEEPTGSVWSTLLAA 480



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 7/240 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  V  +   F  +S R   +WN+++   V NG   + L  + RM    +     +
Sbjct: 243 MYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVS 302

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VI ACA L  L+ G ++H  +++ G+D   FI +SL+ MYAKC + + AR +F+++ 
Sbjct: 303 FSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIE 362

Query: 121 E-KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               D+V W +II   +  G  L+A+ LF EM   G+      F+A L AC  +     G
Sbjct: 363 MCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEG 422

Query: 180 MEIHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQL-ENKDSVSWNSMLTG 235
            +   +  +       L+ Y A A   +  R G++ EA   +  + E      W+++L  
Sbjct: 423 WKYFNSMQRDFGVAPGLEHYAAVA--DLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAA 480


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 250/660 (37%), Positives = 412/660 (62%), Gaps = 9/660 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  +  G     ++   LI   +  G +T A  V   L       WN+++ G+ +N+
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  A+  +  +Q A   PD     + + A   L +L  G+ +HA   + GF +D+ + N
Sbjct: 99  HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158

Query: 301 TLMDMYAKCCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            L+ +YAKC  +     VF    +  +  +SWT I++ YAQN   ++ALE+F  ++   +
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDV 218

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYS 415
             D + + SVL A + L+ + Q + IH  +++ GL    DL+I  ++  +Y KCG +  +
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATA 276

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           + +F+ ++S +++ W +MIS Y  NG A EA+++F+ M   +V  D+I++ SA+SA + +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             L++ + +  ++ R  +  +  ++S+L+DM+A+CG+++ A  VF+    +D+++W++MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
              GLHGR + AI L+  ME     P+ +TFL LL AC+HSG++ EG  F  +M  D+++
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLM-ADHKI 455

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           +P  +HYAC++DLLGRA HL++AY+ ++ M ++P   VW ALL AC+ H + ELGE  A+
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           +L  +DP N G+YV +SN++AA+R W  V +VR+RM+  GL K  G SW+E+  ++ +F 
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
             DKSH   +EI +++  I  +L +EGG+VA     LH++ +EE  + L  HSER+AIAY
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRL-KEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 634

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G++ + +G+ +RITKNLR CV+CH+  KL+S+L  RE+VVRD NRFHHF+ GVCSCGDYW
Sbjct: 635 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 273/530 (51%), Gaps = 34/530 (6%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A Q+FD + +  +F WNA++  Y  N      L  YS M++  +S D+FTFP ++
Sbjct: 67  GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-D 124
           KAC+ L  L  G  +H  V + G+D+  F+ N L+A+YAKC     AR +F+ +   E  
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           +V W +I+SAY+ +G+ +EAL +F  M+++ +  +    V+ L A         G  IHA
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
           + VK G  ++  +  +L  MYA+CG++  A  +  ++++ + + WN+M++G+ +N    +
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  F E+     +PD +   +A+SA  ++G+L   + ++ Y  +  +  D+ I + L+D
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           M+AKC  V     VF +   +D + W+ +I GY  +    +A+ L+R ++  G+  + + 
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKG------LSDLVI------LNAIVDVYGKCGNI 412
              +LMAC+           H  ++R+G      ++D  I         ++D+ G+ G++
Sbjct: 427 FLGLLMACN-----------HSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHL 475

Query: 413 DYSRNVFESIESKD-VVSWTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSA 468
           D +  V + +  +  V  W +++S+   + H  L   A +  + ++ +N  +     +S 
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSN--TGHYVQLSN 533

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           L AA+ L    +  E+   +  KG N +  V  S V++  R  A  + +K
Sbjct: 534 LYAAARL--WDRVAEVRVRMKEKGLNKD--VGCSWVEVRGRLEAFRVGDK 579



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 268/531 (50%), Gaps = 18/531 (3%)

Query: 53  GISVDAFTFPCVIKAC--AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR 110
           GI  D+F    +  A   A LK      +IH  +L  G   + F++  L+   +   D  
Sbjct: 17  GIHSDSFYASLIDSATHKAQLK------QIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
            ARQ+FD +  +  +  WN+II  YS +    +AL ++  MQ   +  +++TF   L+AC
Sbjct: 71  FARQVFDDL-PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVS 228
              S   +G  +HA   + G +  V+V N LIA+YA+C ++  A  V     L  +  VS
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVS 189

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           W ++++ + QN    +A++ F  ++    KPD V  V+ ++A   L +L  G+ +HA  +
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K G   +  +  +L  MYAKC  V     +F +M + + I W  +I+GYA+N    +A++
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYG 407
           +F  +  + +  D + I S + AC+ +  + Q + ++ Y+ R     D+ I +A++D++ 
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KCG+++ +R VF+    +DVV W++MI  Y  +G A EA+ L+  M    V  + +T + 
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            L A +   ++++G      +     N +    + ++D+  R G LD A +V  C+  + 
Sbjct: 430 LLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489

Query: 528 -LILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            + +W ++++A   H     G+ A    + ++  +    H   L+ LYA +
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTG--HYVQLSNLYAAA 538



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 2/236 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  A+ LFDK+    +  WNAM+  Y  NG     ++ +  M    +  D  +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I ACA +  L+    ++  V +  Y    FI ++L+ M+AKC     AR +FDR  
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ DVV+W+++I  Y   G+  EA+ L+R M+R G+  N  TF+  L AC  S     G 
Sbjct: 386 DR-DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
                      N Q      +I +  R G + +A  V+  +  +  V+ W ++L+ 
Sbjct: 445 WFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 8/191 (4%)

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           L   + + SDS    S + +A+  + LK   +++  ++  G    G + + L+   +  G
Sbjct: 12  LYTNSGIHSDSF-YASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFG 67

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            +  A +VF+ +    +  W ++I     +   + A+ ++  M+    +PD  TF  LL 
Sbjct: 68  DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127

Query: 572 ACSHSGLINEGK-KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI-EP 629
           ACS    +  G+    ++ R  +  D + ++   L+ L  +   L  A      + + E 
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQN--GLIALYAKCRRLGSARTVFEGLPLPER 185

Query: 630 TAEVWCALLGA 640
           T   W A++ A
Sbjct: 186 TIVSWTAIVSA 196


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/688 (37%), Positives = 407/688 (59%), Gaps = 35/688 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +K  Q   +   + L+++Y+    + ++  +   +    +++W S++  +  + 
Sbjct: 27  QLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHG 85

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +++  F  +  +G  PD     + + +   L +L  G+ LH Y I+ G   DL  GN
Sbjct: 86  LPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGN 145

Query: 301 TLMDMYAKCCCVNYMGR--------------------------------VFYQMTAQDFI 328
            LM+MY+K   +   GR                                +F  M  +D +
Sbjct: 146 ALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLV 205

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           SW TIIAG A+N  + + L + R +    L  D   + SVL   +    +S+ KEIHG  
Sbjct: 206 SWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCS 265

Query: 389 IRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           IR+GL +D+ + ++++D+Y KC  +  S  VF  +  +D +SW S+I+  V NGL +E L
Sbjct: 266 IRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 325

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
             F  M  A ++  S +  S + A + L+ L  GK+L+G+I R GF+    +ASSLVDMY
Sbjct: 326 RFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 385

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           A+CG +  A ++F+ ++ +D++ WT+MI    LHG+   AI+LF +ME E   P+H+ F+
Sbjct: 386 AKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFM 445

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
           A+L ACSH GL++E  K+   M  D+ + P  EHYA + DLLGRA  LEEAY F+  M I
Sbjct: 446 AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHI 505

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
            PT  +W  LL ACRVH N ++ E VA ++LE+DP N G Y+L++N+++A+R+WK+  + 
Sbjct: 506 GPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKW 565

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           R  MR  G++KTP  SWIE+ NK+++F+A D+SH   ++I + +  + E +E+E GYV  
Sbjct: 566 RASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKE-GYVPD 624

Query: 748 TQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSR 807
           T  V H+VEEE+K  ++  HSERLAI +G++ +  G  IR+TKNLRVC DCH+  K +S+
Sbjct: 625 TSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISK 684

Query: 808 LFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + GRE+VVRD +RFHHF+ G CSCGDYW
Sbjct: 685 IVGREIVVRDNSRFHHFKNGTCSCGDYW 712



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 212/404 (52%), Gaps = 31/404 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y     + D+ +LF+ +       W +++  Y S+G P + L ++  M   G+  D   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK-------AR 113
           FP V+K+CA+L DL+ G  +HG +++ G D   +  N+L+ MY+K     +       A 
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 114 QLFDRMGEK------------------------EDVVLWNSIISAYSASGQCLEALGLFR 149
           ++FD M E+                        +D+V WN+II+  + +G   E L + R
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EM    L  +++T  + L    ++   + G EIH  +++ G +  +YVA++LI MYA+C 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
           ++ ++  V   L  +D +SWNS++ G VQN L+ + ++FFR++  A  KP      + + 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A   L  L  GK+LH Y  + GF  ++ I ++L+DMYAKC  +    ++F +M  +D +S
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           WT +I G A +     A+ELF  ++ EG+  + +   +VL ACS
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS 452



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 137/312 (43%), Gaps = 38/312 (12%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           ++ ++L     +K  SQ +++H  +++   S L  L+ ++ +Y     +  S  +F +I 
Sbjct: 8   LVKALLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIH 67

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
               ++W S+I  Y  +GL +++L  F  M  + +  D     S L + + L  L  G+ 
Sbjct: 68  FPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGES 127

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYA-----------RCGA-------------------- 512
           L+G+IIR G + +    ++L++MY+           R GA                    
Sbjct: 128 LHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVL 187

Query: 513 -LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
             D   K+F  +  KDL+ W ++I  N  +G  +  + +  +M   +  PD  T  ++L 
Sbjct: 188 SEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLP 247

Query: 572 ACSHSGLINEGKKFLEIMRCDYQ--LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
             + +  I+ GK   EI  C  +  LD      + L+D+  +   + ++ + V ++  E 
Sbjct: 248 LIAENVDISRGK---EIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCR-VFTLLTER 303

Query: 630 TAEVWCALLGAC 641
               W +++  C
Sbjct: 304 DGISWNSIIAGC 315


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 266/765 (34%), Positives = 436/765 (56%), Gaps = 7/765 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR--TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY  CGS  D  ++F ++  R  ++  WN+++ ++V NG   + L  Y +M   G+S D 
Sbjct: 79  MYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDV 138

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            TFPC++KAC  LK+      +   V   G D  +F+ +SL+  Y +        +LFDR
Sbjct: 139 STFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDR 198

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           + +K D V+WN +++ Y+  G     +  F  M+   +  NA TF   L  C       L
Sbjct: 199 VLQK-DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL 257

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G+++H   V SG + +  + N+L++MY++CG+  +A+ +   +   D+V+WN M++G+VQ
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           + L  +++ FF E+  +G  PD +   + + +  +  NL   K++H Y ++     D+ +
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            + L+D Y KC  V+    +F Q  + D + +T +I+GY  N  ++ +LE+FR +    +
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRN 417
             + + + S+L     L  +   +E+HG+II+KG  +   +  A++D+Y KCG ++ +  
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +FE +  +D+VSW SMI+    +   + A+++F  M  + +  D +++ +ALSA ++L  
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
              GK ++GF+I+     +    S+L+DMYA+CG L  A  VF  ++ K+++ W S+I A
Sbjct: 558 ESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAA 617

Query: 538 NGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
            G HG+ K ++ LF++M E     PD ITFL ++ +C H G ++EG +F   M  DY + 
Sbjct: 618 CGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHYAC+VDL GRA  L EAY+ V+SM   P A VW  LLGACR+H N EL E+ + K
Sbjct: 678 PQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSK 737

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L++LDP N G YVLISN  A +R+W+ V +VR  M+   ++K PG SWIEI  + H F++
Sbjct: 738 LMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVS 797

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            D +H ES  IY  L  +  +L  E GY+ Q    LH  E   KV
Sbjct: 798 GDVNHPESSHIYSLLNSLLGELRLE-GYIPQPYLPLHP-ESSRKV 840



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 171/588 (29%), Positives = 306/588 (52%), Gaps = 14/588 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG-EK 122
           +++AC+    L  G ++H  ++        +    ++ MYA C  F    ++F R+   +
Sbjct: 41  LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED-SSFETLGME 181
             +  WNSIIS++  +G   +AL  + +M   G+  +  TF   ++AC    +F+  G++
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK--GID 158

Query: 182 IHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             + TV S G +   +VA++LI  Y   GK+   + +  ++  KD V WN ML G+ +  
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218

Query: 241 LYCKAMQFFRELQGAGQKPDQVC--TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                ++ F  ++     P+ V    V +V AS  L +L  G +LH   +  G   +  I
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL--GVQLHGLVVVSGVDFEGSI 276

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N+L+ MY+KC   +   ++F  M+  D ++W  +I+GY Q+    ++L  F  +   G+
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D +   S+L + S  + +   K+IH YI+R  +S D+ + +A++D Y KC  +  ++N
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F    S DVV +T+MIS Y+HNGL  ++LE+F  + +  +  + ITLVS L     L  
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           LK G+EL+GFII+KGF+   ++  +++DMYA+CG +++A ++F  +  +D++ W SMI  
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM-RCDYQLD 596
                    AID+F +M       D ++  A L AC++    + GK     M +     D
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD 576

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
            + E  + L+D+  +  +L+ A    ++M+ E     W +++ AC  H
Sbjct: 577 VYSE--STLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 268/741 (36%), Positives = 431/741 (58%), Gaps = 12/741 (1%)

Query: 102 MYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAY 161
           MY KC     A  +F  + E  + V W  I++A++ +G   EALG +R M   GL  +  
Sbjct: 1   MYGKCGSVADALAVFHAI-EHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            FV A+  C  S     G  +HA  +++      + +  ALI MYARC  +  A     +
Sbjct: 60  MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFREL---QGAGQKPDQVCTVNAVSASGRLGNL 277
           +  K  V+WN+++ G+ +N  +  A++ ++++      G KPD +   +A+ A   +G++
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+E+ A  +  G+ SD  + N L++MY+KC  +    +VF ++  +D I+W T+I+GY
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
           A+     +ALELF+ +       +V+    +L AC+ L+ + Q + IH  +   G  SDL
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299

Query: 397 VILNAIVDVYGKCGN-IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           VI N ++++Y KC + ++ +R VFE + ++DV++W  +I +YV  G A +AL++F  M  
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
            NV  + ITL + LSA + L   ++GK ++  I       +  + +SL++MY RCG+LD 
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
              VF  ++ K L+ W+++I A   HG  +  ++ F+++  E  A D +T ++ L ACSH
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
            G++ EG +    M  D+ L P   H+ C+VDLL RA  LE A   +  M   P A  W 
Sbjct: 480 GGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV-LISNVFAASRKWKDVEQVRMRMRGS 694
           +LL  C++H++ +    VA KL EL+  +  + V L+SNV+A + +W DV + R R    
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNR---R 596

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
             +K PG S+IEI + +H F+A DKSH E + I  ++  +++++ ++ GYV   + VLHN
Sbjct: 597 AARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQM-KDAGYVPDMRMVLHN 655

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           V+EEEK QML  HSE+LAIAYG++ +  G+ + I KNLR CVDCH+  K +SR+ GR++V
Sbjct: 656 VKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIV 715

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           VRD+ RFHHFE G CSC DYW
Sbjct: 716 VRDSTRFHHFENGSCSCKDYW 736



 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 190/585 (32%), Positives = 319/585 (54%), Gaps = 17/585 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGSV DA  +F  +      +W  ++ A+  NG     L  Y RM + G+  D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRM 119
           F   I  C+  KDL  G  +H ++L+      D I+  +L+ MYA+C D   AR+ FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREM---QRVGLVTNAYTFVAALQACEDSSFE 176
           G+K  +V WN++I+ YS +G    AL ++++M      G+  +A TF +AL AC      
Sbjct: 121 GKKT-LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           + G EI A TV SG      V NALI MY++CG +  A  V  +L+N+D ++WN+M++G+
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            +     +A++ F+ +     KP+ V  +  ++A   L +L  G+ +H    + G+ SDL
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299

Query: 297 QIGNTLMDMYAKCCCVNYMGR-VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            IGN L++MY KC       R VF ++  +D I+W  +I  Y Q      AL++F+ +QL
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDY 414
           E +  + + + +VL AC+ L    Q K +H  I   +  +D+V+ N+++++Y +CG++D 
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +  VF +I  K +VSW+++I++Y  +G +   LE F+ + +  + +D +T+VS LSA S 
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 475 LSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQTKDLILWT 532
             +LK+G +     +   G   +      +VD+ +R G L+ A N + +     D + WT
Sbjct: 480 GGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 533 SMINANGLHGRGKVA---IDLFYKMEAESFAPDH--ITFLALLYA 572
           S+++   LH   K A    D  +++E+E    +H  +T L+ +YA
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESED---EHSTVTLLSNVYA 581


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/666 (38%), Positives = 411/666 (61%), Gaps = 3/666 (0%)

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
           +DS  +T   +I+A  + +G     ++   L+   +  G+++ A  +  +  + D   WN
Sbjct: 83  DDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWN 142

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           +++  + ++  +  A++ +  +Q A   PD       + A   L  L  G+ +H    + 
Sbjct: 143 AIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRH 202

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           GF SD+ + N L+ +YAKC  +     VF ++  +  +SWT+II+GYAQN   ++AL +F
Sbjct: 203 GFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIF 262

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
             ++   +  D + + SVL A + ++ +   K IHG +I+ GL  +  +L ++  +Y KC
Sbjct: 263 SEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKC 322

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G++  +R  F  +E+  ++ W +MIS YV NG A EA+ELF LM   N+  DSIT+ S++
Sbjct: 323 GHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSI 382

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           +A + +  L+  + ++ +I    F  +  V +SL+D YA+CG++D+A  VF+ +  KD++
Sbjct: 383 AACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVV 442

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           +W++M+   GLHG+G+ +I LF+ M     +P+ +TF+ LL AC +SGL+ EG      M
Sbjct: 443 VWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM 502

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
           R DY ++P  +HYAC+VDLLGRA HL+ AY FV +M IEP   VW ALL AC++H +  L
Sbjct: 503 R-DYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTL 561

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
           GE  A++L  LDP N G+YV +SN++A+S  W  V +VR+ MR  GL K  G S IEI  
Sbjct: 562 GEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEING 621

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           K+ +F A DK+H  S EI++++ ++  +L +E G+V  T+ VLH++  EE  + L  HSE
Sbjct: 622 KLQAFQAGDKTHPRSKEIFEEVEDLERRL-KEAGFVPHTESVLHDLNYEETEETLCNHSE 680

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           RLAIAYG++ +  G+ +RITKNLR C +CH+  KL+S+L  RE+VVRDA RFHHF+ G C
Sbjct: 681 RLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGAC 740

Query: 830 SCGDYW 835
           SCGDYW
Sbjct: 741 SCGDYW 746



 Score =  238 bits (608), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 258/501 (51%), Gaps = 8/501 (1%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           +I+  +L  G     F++  LV   +   +   AR+LFD+  +  DV LWN+I+  YS  
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDP-DVFLWNAIVRCYSRH 151

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G    A+ ++  MQ   +  + ++F   L+AC       +G  +H    + G    V+V 
Sbjct: 152 GFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQ 211

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N L+A+YA+CG++  A  V  +L ++  VSW S+++G+ QN    +A++ F E++    +
Sbjct: 212 NGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVR 271

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           PD +  V+ + A   + +L +GK +H   IK G   +  +  +L  +YAKC  V      
Sbjct: 272 PDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLF 331

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F Q+     I W  +I+GY +N    +A+ELFR ++ + +  D + + S + AC+ +  +
Sbjct: 332 FNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSL 391

Query: 379 SQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
              + +  YI      + VI+N +++D Y KCG++D +R VF+ I  KDVV W++M+  Y
Sbjct: 392 ELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGY 451

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             +G   E++ LF+ M +A V  + +T V  L+A  +  ++++G +L   +   G     
Sbjct: 452 GLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRH 511

Query: 498 SVASSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMINANGLHGR---GKVAIDLFYK 553
              + +VD+  R G LD A N V N      + +W ++++A  +H     G+ A +  + 
Sbjct: 512 QHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFS 571

Query: 554 MEAESFAPDHITFLALLYACS 574
           ++   +   H   L+ LYA S
Sbjct: 572 LDP--YNTGHYVQLSNLYASS 590



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 248/458 (54%), Gaps = 6/458 (1%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G V  A +LFDK     VF WNA++  Y  +G     +E Y+RM+V  +S D F+FPCV+
Sbjct: 121 GEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVL 180

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KAC+ L  L+ G ++HG + + G++S  F+ N LVA+YAKC +  +A  +F R+ ++  +
Sbjct: 181 KACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRT-I 239

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V W SIIS Y+ +GQ +EAL +F EM++  +  +    V+ L+A  D      G  IH  
Sbjct: 240 VSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGC 299

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
            +K G   +  +  +L ++YA+CG +  A     Q+EN   + WN+M++G+V+N    +A
Sbjct: 300 VIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEA 359

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           ++ FR ++    +PD +   ++++A  ++G+L   + +  Y     F +D+ +  +L+D 
Sbjct: 360 IELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDT 419

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
           YAKC  V+    VF ++  +D + W+ ++ GY  +    +++ LF  ++  G+  + +  
Sbjct: 420 YAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTF 479

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVFESIES 424
             +L AC     + +  ++   +   G+       A +VD+ G+ G++D + N   ++  
Sbjct: 480 VGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPI 539

Query: 425 KDVVS-WTSMISS---YVHNGLANEALELFYLMNEANV 458
           +  VS W +++S+   + H  L   A E  + ++  N 
Sbjct: 540 EPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNT 577



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 171/355 (48%), Gaps = 10/355 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG ++ A  +F ++  RT+ +W +++  Y  NG+P+  L  +S MR   +  D   
Sbjct: 217 LYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIA 276

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++A   ++DL+ G  IHG V+K G +    ++ SL ++YAKC     AR  F+++ 
Sbjct: 277 LVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQV- 335

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E   ++ WN++IS Y  +G   EA+ LFR M+   +  ++ T  +++ AC       L  
Sbjct: 336 ENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELAR 395

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +      S     V V  +LI  YA+CG +  A  V  ++ +KD V W++M+ G+  + 
Sbjct: 396 WMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHG 455

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +++  F  ++ AG  P+ V  V  ++A    G +  G +L       G     Q   
Sbjct: 456 QGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQ--- 512

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
                YA  C V+ +GR  +   A +F+    I  G +     L A ++ R V L
Sbjct: 513 ----HYA--CVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTL 561


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 276/785 (35%), Positives = 453/785 (57%), Gaps = 9/785 (1%)

Query: 56   VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG-YDSTD-FIVNSLVAMYAKCYDFRKAR 113
            VD++ +  +++ C    D   G  +HG V++ G     D F  N L+ MY K   F  A 
Sbjct: 426  VDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAH 485

Query: 114  QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
            ++FD + E+ ++V + +++  ++  G+  EA  LF+ ++  G   N +     L+     
Sbjct: 486  RVFDGLPER-NMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLV--V 542

Query: 174  SFETLGME--IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            + +TLG+   +HA   K G +   +V +ALI  Y+ CG +++A  V   +  KD+V+W +
Sbjct: 543  AMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTA 602

Query: 232  MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
            M++ + +ND     +Q F +++ A  K +     + + A+  L +++ GK +HA ++K  
Sbjct: 603  MVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTL 662

Query: 292  FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
            + ++  +   L+DMYAKC  +      F  +T  D I W+ +I+ YAQ N + +A ELF 
Sbjct: 663  YDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFI 722

Query: 352  TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
             +    +  +   + SVL AC+ +  +   K+IH + I+ G  S+L + NA++D+Y KC 
Sbjct: 723  RMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCS 782

Query: 411  NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            +++ S  +F S+   + VSW ++I  Y  +G    AL +F  M  A+V S  +T  S L 
Sbjct: 783  DMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLR 842

Query: 471  AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
            A +S + +    +++  I +  FN +  V++SL+D YA+CG +  A ++F  ++  DL+ 
Sbjct: 843  ACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVS 902

Query: 531  WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
            W ++I+   +HG+  +A +LF  M   S   + ITF+ALL  C  +GL+++G    + MR
Sbjct: 903  WNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMR 962

Query: 591  CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
             D+ ++P  EHY C+V LLGRA  L +A  F+  +   P+A VW ALL +C VH N ELG
Sbjct: 963  LDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELG 1022

Query: 651  EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
               A+K+LE++P +   YVL+SN+++A+     V   R  MR  G++K PG SW+EI  +
Sbjct: 1023 RFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGE 1082

Query: 711  IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSER 770
            +H+F    + H     I   L  +  K  RE GYV  T  VLH++EEE+KV+ML+ HSER
Sbjct: 1083 VHAFSVGSEDHPCMRVINAMLEWLNLKAIRE-GYVPDTDEVLHDLEEEQKVRMLWVHSER 1141

Query: 771  LAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCS 830
            LA+AYG++ +  G  IRI KNLR C+DCH+  K++S++  +E++VRD NRFHHFE G CS
Sbjct: 1142 LALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCS 1201

Query: 831  CGDYW 835
            CGDYW
Sbjct: 1202 CGDYW 1206



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 159/596 (26%), Positives = 300/596 (50%), Gaps = 11/596 (1%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MY K G    A ++FD + +R + ++  ++  +   GE       + R+R  G  V+ F 
Sbjct: 474  MYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFV 533

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               V+K    +  L     +H    K G+D   F+ ++L+  Y+ C     AR++FD + 
Sbjct: 534  LTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIV 593

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             K D V W +++S YS +      L +F +M+      N +   + L+A    S   LG 
Sbjct: 594  GK-DAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGK 652

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             IHA +VK+  + + +V  AL+ MYA+CG + +A      + N D + W+ M++ + Q +
Sbjct: 653  GIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCN 712

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               +A + F  +  +   P++    + + A   +  L  GK++H +AIK G  S+L +GN
Sbjct: 713  QNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGN 772

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+D+YAKC  +     +F  +   + +SW TII GY+++     AL +FR ++   + +
Sbjct: 773  ALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPS 832

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
              +   SVL AC+    ++   ++H  I +    SD ++ N+++D Y KCG I  +R +F
Sbjct: 833  TQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIF 892

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            E+++  D+VSW ++IS Y  +G A  A ELF +M++ +++++ IT V+ LS   S  ++ 
Sbjct: 893  ETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVS 952

Query: 480  KGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDLILWTSMINA 537
            +G  L +   +  G        + +V +  R G L D  N + +       ++W +++++
Sbjct: 953  QGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSS 1012

Query: 538  NGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
              +H     G+ + +   ++E +    D  T++ L    S +G +++   F + MR
Sbjct: 1013 CIVHKNVELGRFSAEKVLEIEPQ----DETTYVLLSNMYSAAGSLDQVAFFRKSMR 1064


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 250/660 (37%), Positives = 411/660 (62%), Gaps = 9/660 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  +  G     ++   LI   +  G +T A  V   L       WN+++ G+ +N+
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  A+  +  +Q A   PD     + + A   L +L  G+ +HA   + GF +D+ + N
Sbjct: 99  HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158

Query: 301 TLMDMYAKCCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            L+ +YAKC  +     VF    +  +  +SWT I++ YAQN   ++ALE+F  ++   +
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYS 415
             D + + SVL A + L+ + Q + IH  +++ GL    DL+I  ++  +Y KCG +  +
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATA 276

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           + +F+ ++S +++ W +MIS Y  NG A EA+++F+ M   +V  D+I++ SA+SA + +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             L++ + +  ++ R  +  +  ++S+L+DM+A+CG+++ A  VF+    +D+++W++MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
              GLHGR + AI L+  ME     P+ +TFL LL AC+HSG++ EG  F   M  D+++
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKI 455

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           +P  +HYAC++DLLGRA HL++AY+ ++ M ++P   VW ALL AC+ H + ELGE  A+
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           +L  +DP N G+YV +SN++AA+R W  V +VR+RM+  GL K  G SW+E+  ++ +F 
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
             DKSH   +EI +++  I  +L +EGG+VA     LH++ +EE  + L  HSER+AIAY
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRL-KEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 634

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G++ + +G+ +RITKNLR CV+CH+  KL+S+L  RE+VVRD NRFHHF+ GVCSCGDYW
Sbjct: 635 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 274/530 (51%), Gaps = 34/530 (6%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A Q+FD + +  +F WNA++  Y  N      L  YS M++  +S D+FTFP ++
Sbjct: 67  GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-D 124
           KAC+ L  L  G  +H  V + G+D+  F+ N L+A+YAKC     AR +F+ +   E  
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           +V W +I+SAY+ +G+ +EAL +F +M+++ +  +    V+ L A         G  IHA
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
           + VK G  ++  +  +L  MYA+CG++  A  +  ++++ + + WN+M++G+ +N    +
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  F E+     +PD +   +A+SA  ++G+L   + ++ Y  +  +  D+ I + L+D
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           M+AKC  V     VF +   +D + W+ +I GY  +    +A+ L+R ++  G+  + + 
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKG------LSDLVI------LNAIVDVYGKCGNI 412
              +LMAC+           H  ++R+G      ++D  I         ++D+ G+ G++
Sbjct: 427 FLGLLMACN-----------HSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHL 475

Query: 413 DYSRNVFESIESKD-VVSWTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSA 468
           D +  V + +  +  V  W +++S+   + H  L   A +  + ++ +N  +     +S 
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSN--TGHYVQLSN 533

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           L AA+ L    +  E+   +  KG N +  V  S V++  R  A  + +K
Sbjct: 534 LYAAARL--WDRVAEVRVRMKEKGLNKD--VGCSWVEVRGRLEAFRVGDK 579



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 269/531 (50%), Gaps = 18/531 (3%)

Query: 53  GISVDAFTFPCVIKAC--AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR 110
           GI  D+F    +  A   A LK      +IH  +L  G   + F++  L+   +   D  
Sbjct: 17  GIHSDSFYASLIDSATHKAQLK------QIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
            ARQ+FD +  +  +  WN+II  YS +    +AL ++  MQ   +  +++TF   L+AC
Sbjct: 71  FARQVFDDL-PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVS 228
              S   +G  +HA   + G +  V+V N LIA+YA+C ++  A  V     L  +  VS
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVS 189

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           W ++++ + QN    +A++ F +++    KPD V  V+ ++A   L +L  G+ +HA  +
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K G   +  +  +L  MYAKC  V     +F +M + + I W  +I+GYA+N    +A++
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYG 407
           +F  +  + +  D + I S + AC+ +  + Q + ++ Y+ R     D+ I +A++D++ 
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KCG+++ +R VF+    +DVV W++MI  Y  +G A EA+ L+  M    V  + +T + 
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            L A +   ++++G      +     N +    + ++D+  R G LD A +V  C+  + 
Sbjct: 430 LLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489

Query: 528 -LILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            + +W ++++A   H     G+ A    + ++  +    H   L+ LYA +
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTG--HYVQLSNLYAAA 538



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 2/236 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  A+ LFDK+    +  WNAM+  Y  NG     ++ +  M    +  D  +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I ACA +  L+    ++  V +  Y    FI ++L+ M+AKC     AR +FDR  
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ DVV+W+++I  Y   G+  EA+ L+R M+R G+  N  TF+  L AC  S     G 
Sbjct: 386 DR-DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
                      N Q      +I +  R G + +A  V+  +  +  V+ W ++L+ 
Sbjct: 445 WFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 39/193 (20%), Positives = 83/193 (43%), Gaps = 12/193 (6%)

Query: 452 LMNEANVESDSI--TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           L   + + SDS   +L+ + +  + L      K+++  ++  G    G + + L+   + 
Sbjct: 12  LYTNSGIHSDSFYASLIDSATHKAQL------KQIHARLLVLGLQFSGFLITKLIHASSS 65

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
            G +  A +VF+ +    +  W ++I     +   + A+ ++  M+    +PD  TF  L
Sbjct: 66  FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125

Query: 570 LYACSHSGLINEGK-KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI- 627
           L ACS    +  G+    ++ R  +  D + ++   L+ L  +   L  A      + + 
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN--GLIALYAKCRRLGSARTVFEGLPLP 183

Query: 628 EPTAEVWCALLGA 640
           E T   W A++ A
Sbjct: 184 ERTIVSWTAIVSA 196


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 268/741 (36%), Positives = 431/741 (58%), Gaps = 12/741 (1%)

Query: 102 MYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAY 161
           MY KC     A  +F  + E  + V W  I++A++ +G   EALG +R M   GL  +  
Sbjct: 1   MYGKCGSVADALAVFHAI-EHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            FV A+  C  S     G  +HA  +++      + +  ALI MYARC  +  A     +
Sbjct: 60  MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFREL---QGAGQKPDQVCTVNAVSASGRLGNL 277
           +  K  V+WN+++ G+ +N  +  A++ ++++      G KPD +   +A+ A   +G++
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+E+ A  +  G+ SD  + N L++MY+KC  +    +VF ++  +D I+W T+I+GY
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
           A+     +ALELF+ +       +V+    +L AC+ L+ + Q + IH  +   G  SDL
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299

Query: 397 VILNAIVDVYGKCGN-IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           VI N ++++Y KC + ++ +R VFE + ++DV++W  +I +YV  G A +AL++F  M  
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
            NV  + ITL + LSA + L   ++GK ++  I       +  + +SL++MY RCG+LD 
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
              VF  ++ K L+ W+++I A   HG  +  ++ F+++  E  A D +T ++ L ACSH
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
            G++ EG +    M  D+ L P   H+ C+VDLL RA  LE A   +  M   P A  W 
Sbjct: 480 GGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV-LISNVFAASRKWKDVEQVRMRMRGS 694
           +LL  C++H++ +    VA KL EL+  +  + V L+SNV+A + +W DV + R R    
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNR---R 596

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
             +K PG S+IEI + +H F+A DKSH E + I  ++  +++++ ++ GYV   + VLHN
Sbjct: 597 AARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQM-KDAGYVPDMRMVLHN 655

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           V+EEEK QML  HSE+LAIAYG++ +  G+ + I KNLR CVDCH+  K +SR+ GR++V
Sbjct: 656 VKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIV 715

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           VRD+ RFHHFE G CSC DYW
Sbjct: 716 VRDSTRFHHFENGSCSCKDYW 736



 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 191/585 (32%), Positives = 319/585 (54%), Gaps = 17/585 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGSV DA  +F  +      +W  ++ A+  NG     L  Y RM + G+  D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRM 119
           F   I  C+  KDL  G  +H ++L+      D I+  +L+ MYA+C D   AR+ FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREM---QRVGLVTNAYTFVAALQACEDSSFE 176
           G+K  +V WN++I+ YS +G    AL ++++M      G+  +A TF +AL AC      
Sbjct: 121 GKKT-LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           + G EI A TV SG      V NALI MY++CG +  A  V  +L+N+D ++WN+M++G+
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            +     +A++ F+ +     KP+ V  +  ++A   L +L  G+ +H    + G+ SDL
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299

Query: 297 QIGNTLMDMYAKCCCVNYMGR-VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            IGN L++MY KC       R VF +M  +D I+W  +I  Y Q      AL++F+ +QL
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDY 414
           E +  + + + +VL AC+ L    Q K +H  I   +  +D+V+ N+++++Y +CG++D 
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +  VF +I  K +VSW+++I++Y  +G +   LE F+ + +  + +D +T+VS LSA S 
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 475 LSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQTKDLILWT 532
             +LK+G +     +   G   +      +VD+ +R G L+ A N + +     D + WT
Sbjct: 480 GGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 533 SMINANGLHGRGKVA---IDLFYKMEAESFAPDH--ITFLALLYA 572
           S+++   LH   K A    D  +++E+E    +H  +T L+ +YA
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESED---EHSTVTLLSNVYA 581


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/803 (33%), Positives = 460/803 (57%), Gaps = 8/803 (0%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            +YG  G V DA++LF ++ +R V +W A++ A  SNG     L  Y +MR  G+  +A  
Sbjct: 390  LYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANA 449

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            F  V+  C  L++   G ++   V+  G  +   + NSL+ M+        A +LFDRM 
Sbjct: 450  FATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRM- 508

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            E+ D + WN++IS YS  G C +   +F +M+  GL  +A T  + +  C  S   + G 
Sbjct: 509  EEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGS 568

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             IH+  ++S  +  V V NAL+ MY+  GK+++A  + + +  +D +SWN+M++ +VQN 
Sbjct: 569  GIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNC 628

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                A++   +L    + P+ +   +A+ A    G L++GK +HA  ++     +L +GN
Sbjct: 629  NSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGN 688

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            +L+ MY KC  +    +VF  M   D +S+  +I GYA      KA+++F  ++  G+  
Sbjct: 689  SLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKP 748

Query: 361  DVMIIGSVLMA-CSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNV 418
            + + + ++  +  S     +  + +H YIIR G LSD  + N+++ +Y KCGN++ S N+
Sbjct: 749  NYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNI 808

Query: 419  FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
            F SI +K++VSW ++I++ V  G   EAL+LF  M  A  + D + L   LS+ +SL+ L
Sbjct: 809  FNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASL 868

Query: 479  KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            ++G +L+G  ++ G + +  V ++ +DMY +CG +D   +V      +    W ++I+  
Sbjct: 869  EEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGY 928

Query: 539  GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
              +G  K A + F +M A    PD++TF+ALL ACSH+GL+++G  +   M   + + P 
Sbjct: 929  AKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPG 988

Query: 599  PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
             +H  C+VDLLGR     EA +F+  M + P   +W +LL + R H N E+G   AKKLL
Sbjct: 989  IKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLL 1048

Query: 659  ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
            ELDP +   YVL+SN++A + +W DV+++R  M+   + K P  SW+++ N++ +F   D
Sbjct: 1049 ELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGD 1108

Query: 719  KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            + H  +++IY KL E+  KL RE GY+A T   LH+ +EE+K Q L+ HSE+LA+AYG++
Sbjct: 1109 RGHKHAEKIYAKLDEMLLKL-REVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLI 1167

Query: 779  ----KSTEGSLIRITKNLRVCVD 797
                 ST+GS +  + ++  C++
Sbjct: 1168 VVPEGSTQGSAVNTSSSIDACLE 1190



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 176/634 (27%), Positives = 325/634 (51%), Gaps = 14/634 (2%)

Query: 13  QLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML- 71
            LFD+++ RT  TW   +   V  G   +  E    MR  G+ +  F    ++ AC    
Sbjct: 298 HLFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRG 357

Query: 72  --KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
             + + CGA IH L  + G     +I  +L+ +Y        A++LF  M E+ +VV W 
Sbjct: 358 RDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPER-NVVSWT 416

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           +++ A S++G   EAL  +R+M+R G+  NA  F   +  C     E  G+++ +  + S
Sbjct: 417 ALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVS 476

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G   QV VAN+LI M+   G++ +A  +  ++E  D++SWN+M++ +    +  K    F
Sbjct: 477 GLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVF 536

Query: 250 RELQGAGQKPD--QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
            +++  G +PD   +C++ +V AS    +  +G  +H+  ++    S + + N L++MY+
Sbjct: 537 SDMRHHGLRPDATTLCSLMSVCASS--DHFSHGSGIHSLCLRSSLDSSVTVINALVNMYS 594

Query: 308 KCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
               ++    +F+ M+ +D ISW T+I+ Y QN     AL+    +       + +   S
Sbjct: 595 AAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSS 654

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
            L ACS    +   K +H  +++  L  +L++ N+++ +YGKC +++ +  VF+S+ + D
Sbjct: 655 ALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHD 714

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL-SAASSLSILKKGKELN 485
           +VS+  +I  Y       +A+++F  M  A ++ + IT+++   S ASS  +   G+ L+
Sbjct: 715 IVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLH 774

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
            +IIR GF  +  VA+SL+ MYA+CG L+ +  +FN +  K+++ W ++I AN   G G+
Sbjct: 775 AYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGE 834

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYAC 604
            A+ LF  M+      D +     L +C+    + EG +   + M+     D +  + A 
Sbjct: 835 EALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAA- 893

Query: 605 LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
            +D+ G+   ++E  Q V    I P  + W  L+
Sbjct: 894 -MDMYGKCGKMDEMLQVVPDQAIRPQ-QCWNTLI 925



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 154/630 (24%), Positives = 298/630 (47%), Gaps = 22/630 (3%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR---QLFDRMGEKEDVVLWNSIISAYS 136
           IHGL ++     + F  N+L+A Y +  D   A     LFD M ++     W + +S   
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPST-WYTAVSGCV 319

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE---TLGMEIHAATVKSGQNL 193
             G   +A  + R M+  G+  + +   + + ACE    +     G  IHA T ++G   
Sbjct: 320 RCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMG 379

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            VY+  AL+ +Y   G +++A  + +++  ++ VSW +++     N    +A++ +R+++
Sbjct: 380 NVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMR 439

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
             G   +       VS  G L N + G ++ +  I  G  + + + N+L+ M+     V+
Sbjct: 440 RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 499

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
              ++F +M   D ISW  +I+ Y+      K   +F  ++  GL  D   + S++  C+
Sbjct: 500 DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 559

Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
                S    IH   +R  L S + ++NA+V++Y   G +  +  +F ++  +D++SW +
Sbjct: 560 SSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNT 619

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MISSYV N  + +AL+    +   N   + +T  SAL A SS   L  GK ++  +++  
Sbjct: 620 MISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLS 679

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
                 V +SL+ MY +C +++ A KVF  + T D++ +  +I    +   G  A+ +F 
Sbjct: 680 LQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFS 739

Query: 553 KMEAESFAPDHITFLALLYA-CSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLG 610
            M +    P++IT + +  +  S + L N G+     I+R  +  D +  +   L+ +  
Sbjct: 740 WMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVAN--SLITMYA 797

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL--GEIVAKKLLELD-PGNPGN 667
           +  +LE +     S+  +     W A++ A     N +L  GE   K  +++   GN  +
Sbjct: 798 KCGNLESSTNIFNSITNKNIVS-WNAIIAA-----NVQLGHGEEALKLFIDMQHAGNKLD 851

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
            V ++   ++      +E+  M++ G G+K
Sbjct: 852 RVCLAECLSSCASLASLEE-GMQLHGLGMK 880



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR---QLFDRMGEKEDVVLWNSIISAYS 136
           IHGL ++     + F  N+L+A Y +  D   A     LFD M ++     W + +S   
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPST-WYTAVSGCV 96

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE---TLGMEIHAATVKSGQNL 193
             G+   A  + R M+  G+  + +   + + ACE    +     G  IHA T ++G   
Sbjct: 97  RCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMG 156

Query: 194 QVYVANALIAM 204
            VY+  AL+ +
Sbjct: 157 NVYIGRALLHL 167



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 3/93 (3%)

Query: 13  QLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML- 71
            LFD+++ RT  TW   +   V  G      E    MR  G+ +  F    ++ AC    
Sbjct: 75  HLFDEMADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRG 134

Query: 72  --KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAM 102
             + + CGA IH L  + G     +I  +L+ +
Sbjct: 135 RDEGIACGAAIHALTHRAGLMGNVYIGRALLHL 167


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  507 bits (1306), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/727 (37%), Positives = 424/727 (58%), Gaps = 48/727 (6%)

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           W S+I  Y++ G   ++LG F  M   GL  +   F + L+AC       LG  +H   +
Sbjct: 76  WKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYII 135

Query: 188 KSGQNLQVYVANALIAMYARCGKMTE-------AAGVLYQL-ENKDSVSWNSMLTG---- 235
           + G +  +Y  NAL+ MY++   + +       A+ VL ++ E   SV   S+L G    
Sbjct: 136 RVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQGR 195

Query: 236 ------FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
                     D+ C++ +F  ++     KP                     +E+ A  + 
Sbjct: 196 KVSDIEAFNYDVSCRSREFEAQVLEIDYKPRS-----------------EYREMEACNLG 238

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
           Q      QI +    M      V+ + ++F  M  +D +SW TIIAG A+N  + + L +
Sbjct: 239 Q------QIKDISHSM-----SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTM 287

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
            R +    L  D   + SVL   +    +S+ KEIHG  IR+GL +++ + ++++D+Y K
Sbjct: 288 VREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAK 347

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           C  +  S  VF  +  +D +SW S+I+  V NGL +E L+ F  M  A ++  S +  S 
Sbjct: 348 CTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSI 407

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           + A + L+ L  GK+L+G+I R GF+    +ASSLVDMYA+CG +  A ++F+ ++ +D+
Sbjct: 408 MPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDM 467

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
           + WT+MI    LHG    AI+LF +M+ E   P+++ F+A+L ACSH+GL++E  K+   
Sbjct: 468 VSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNS 527

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           M  D+ + P  EHYA + DLLGRA  LEEAY F+  M I PT  VW  LL ACRVH N +
Sbjct: 528 MTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVD 587

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
           + E VA ++LE+DP N G Y+L++N+++A+R+WK+  + R  +R +G++KTP  SWIE+ 
Sbjct: 588 MAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVR 647

Query: 709 NKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHS 768
           NK+++F+A D+SH   ++I + +  + E +E+E GYV  T  V H+VEEE+K  ++  HS
Sbjct: 648 NKVYAFMAGDESHPCYEKIREAMEVLMELMEKE-GYVPDTSEVHHDVEEEQKKYLVCSHS 706

Query: 769 ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
           ERLAI +G++ +  G+ IR+TKNLRVC DCH+  K +S++ GRE+VVRD +RFHHF+ G 
Sbjct: 707 ERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGT 766

Query: 829 CSCGDYW 835
           CSCGDYW
Sbjct: 767 CSCGDYW 773



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 255/531 (48%), Gaps = 39/531 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y     + D+ +LF+ +       W +++  Y S+G P + L ++  M   G+  D   
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK-------AR 113
           FP V+KACAML DL+ G  +HG +++ G D   +  N+L+ MY+K    +K       A 
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA---- 169
           Q+ D M E+   V   S+                        LV N    V+ ++A    
Sbjct: 171 QVLDEMTERTRSVRTASV------------------------LVGNQGRKVSDIEAFNYD 206

Query: 170 --CEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
             C    FE   +EI        + ++       I   +    +     +   +  KD V
Sbjct: 207 VSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLV 266

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           SWN+++ G  +N LY + +   RE+ GA  KPD     + +       ++  GKE+H  +
Sbjct: 267 SWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCS 326

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           I+QG  +++ + ++L+DMYAKC  V    RVF  +T +D ISW +IIAG  QN    + L
Sbjct: 327 IRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 386

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVY 406
           + FR + +  +        S++ AC+ L  +   K++HGYI R G  + + I +++VD+Y
Sbjct: 387 KFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 446

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            KCGNI  +R +F+ +  +D+VSWT+MI     +G A +A+ELF  M    +E + +  +
Sbjct: 447 AKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFM 506

Query: 467 SALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           + L+A S   ++ +  K  N   +  G        +++ D+  R G L+ A
Sbjct: 507 AVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEA 557



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 208/450 (46%), Gaps = 25/450 (5%)

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           +Y+    + ++  +   L    +++W S++  +  + L  K++  F  +  +G  PD   
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
             + + A   L +L  G+ LH Y I+ G   DL  GN LM+MY+K   +   GR   ++ 
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGR--QRLG 168

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
           A   +   T      +    L   +  +   +E  + DV        +C   +  +Q  E
Sbjct: 169 ASQVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDV--------SCRSREFEAQVLE 220

Query: 384 IHGYIIRKGLSDLVILN---AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
           I  Y  R    ++   N    I D+     ++D  R +FE +  KD+VSW ++I+    N
Sbjct: 221 I-DYKPRSEYREMEACNLGQQIKDI-SHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARN 278

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
           GL  E L +   M  AN++ DS TL S L   +    + KGKE++G  IR+G + E  VA
Sbjct: 279 GLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVA 338

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---NGLHGRGKVAIDLFYKMEAE 557
           SSL+DMYA+C  +  + +VF  +  +D I W S+I     NGL   G   +  F +M   
Sbjct: 339 SSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEG---LKFFRQMLMA 395

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
              P   +F +++ AC+H   ++ GK+    I R  +  + +    + LVD+  +  ++ 
Sbjct: 396 KIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIA--SSLVDMYAKCGNIR 453

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
            A Q    M++      W A++  C +H +
Sbjct: 454 TARQIFDRMRLRDMVS-WTAMIMGCALHGH 482



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 76/146 (52%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           ++ S+L     +K  SQ +++H  +++   S L  L+ ++ +Y     +  S  +F ++ 
Sbjct: 10  LVNSLLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTLH 69

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
               ++W S+I  Y  +GL +++L  F  M  + +  D     S L A + L  L  G+ 
Sbjct: 70  FPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGES 129

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYAR 509
           L+G+IIR G + +    ++L++MY++
Sbjct: 130 LHGYIIRVGLDFDLYTGNALMNMYSK 155


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 276/775 (35%), Positives = 436/775 (56%), Gaps = 9/775 (1%)

Query: 10  DAEQLFDKVSQRTV---FTWNAMLGAYVSNGEPLRVLETYSRM--RVLGISVDAFTFPCV 64
           DA  +F  + +        WN ++  + + G     +  Y +M       S DA T P V
Sbjct: 88  DAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYV 147

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           +K+CA L  +  G  +H      G  S  ++ ++L+ MY+     R AR  FD M  + D
Sbjct: 148 VKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWR-D 206

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
            VLWN ++  Y  +G    A+ LFR M+  G   N  T    L  C   +    G+++H+
Sbjct: 207 CVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHS 266

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             VK G   +V VAN L++MYA+C  + +A  +   L   D V+WN M++G VQN L  +
Sbjct: 267 LAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDE 326

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  F ++  +G +PD V  V+ + A   L  L  GKE+H Y I+     D  + + L+D
Sbjct: 327 ALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVD 386

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +Y KC  V     ++    A D +  +T+I+GY  N    KAL++FR +  + +  + + 
Sbjct: 387 IYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVT 446

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + SVL AC+ +  +   +EIHGY++R        + +A++D+Y KCG +D S  +F  + 
Sbjct: 447 VASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMS 506

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            KD V+W SMISS+  NG   EAL+LF  M    ++ +++T+ SALSA +SL  +  GKE
Sbjct: 507 LKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKE 566

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++G II+     +    S+L+DMYA+CG +++A +VF  +  K+ + W S+I+A G HG 
Sbjct: 567 IHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGL 626

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
            K ++   ++M+ E + PDH+TFLAL+ AC+H+GL+ EG +  + M  +Y + P  EH+A
Sbjct: 627 VKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFA 686

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C+VDL  R+  L++A QF+  M  +P A +W ALL ACRVH N EL +I +++L +LDPG
Sbjct: 687 CMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPG 746

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           N G YVL+SN+ A + +W  V +VR  M+ + + K PG SW+++ N  H F+A DKSH E
Sbjct: 747 NSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPE 806

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           S++IY  L  + ++L RE GYV +     H +  +   Q+ +   +RL    G L
Sbjct: 807 SEDIYTSLKALLQEL-REEGYVPRPDLC-HPMHPDNNTQVGFKKYKRLFDVLGTL 859



 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 167/546 (30%), Positives = 298/546 (54%), Gaps = 8/546 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   G + DA   FD +  R    WN M+  Y+  G+    +  +  MRV G   +  T
Sbjct: 185 MYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFAT 244

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             C +  CA   DL  G ++H L +KCG +    + N+L++MYAKC     A +LF+ + 
Sbjct: 245 LACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELL- 303

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            ++D+V WN +IS    +G   EALGLF +M R G   ++ T V+ L A  D +    G 
Sbjct: 304 PRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGK 363

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   +++  ++  ++ +AL+ +Y +C  +  A  +       D V  +++++G+V N 
Sbjct: 364 EVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNG 423

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +  KA+Q FR L     KP+ V   + + A   +  L  G+E+H Y ++  +     + +
Sbjct: 424 MSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVES 483

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LMDMYAKC  ++    +F +M+ +D ++W ++I+ ++QN    +AL+LFR + +EG+  
Sbjct: 484 ALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKY 543

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           + + I S L AC+ L  +   KEIHG II+  + +D+   +A++D+Y KCGN++ +  VF
Sbjct: 544 NNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVF 603

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  K+ VSW S+IS+Y  +GL  E++   + M E   + D +T ++ +SA +   +++
Sbjct: 604 EFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVE 663

Query: 480 KGKELNGFIIRK---GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           +G +L   + ++      +E    + +VD+Y+R G LD A +    +  K D  +W +++
Sbjct: 664 EGLQLFQCMTKEYLIAPRMEH--FACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALL 721

Query: 536 NANGLH 541
           +A  +H
Sbjct: 722 HACRVH 727



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 244/491 (49%), Gaps = 12/491 (2%)

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG---QNLQVYVANALIAM 204
           F   + V  V++A   +A L+ C  +    LG++IHA  V SG    +  + +   L+ M
Sbjct: 20  FSATEVVTDVSSADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGM 79

Query: 205 YARCGKMTEAAGVLYQLENK---DSVSWNSMLTGFVQNDLYCKAMQFFREL--QGAGQKP 259
           Y    +  +A  V   L       S+ WN ++ GF     +  A+ F+ ++    A   P
Sbjct: 80  YVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSP 139

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D       V +   LG +  G+ +H  A   G  SD+ +G+ L+ MY+    +      F
Sbjct: 140 DAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAF 199

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
             M  +D + W  ++ GY +      A+ LFR +++ G + +   +   L  C+    + 
Sbjct: 200 DGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLL 259

Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
              ++H   ++ GL  ++ + N ++ +Y KC  +D +  +FE +   D+V+W  MIS  V
Sbjct: 260 SGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCV 319

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NGL +EAL LF  M  +    DS+TLVS L A + L+ LK+GKE++G+IIR   +++  
Sbjct: 320 QNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAF 379

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           + S+LVD+Y +C  +  A  +++  +  D+++ +++I+   L+G  + A+ +F  +  + 
Sbjct: 380 LVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQC 439

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
             P+ +T  ++L AC+    +  G++    ++R  Y+   + E  + L+D+  +   L+ 
Sbjct: 440 IKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE--SALMDMYAKCGRLDL 497

Query: 618 AYQFVRSMQIE 628
           ++     M ++
Sbjct: 498 SHYIFSKMSLK 508


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 288/854 (33%), Positives = 490/854 (57%), Gaps = 24/854 (2%)

Query: 1    MYGKC--GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV----LGI 54
            MYG C  G  + A+++FD    R + TWNA++  Y   G+ +     +  M+     + +
Sbjct: 214  MYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIEL 273

Query: 55   SVDAFTFPCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
                 TF  +I A  +    L    ++   VLK G  S  ++ ++LV+ +A+     +A+
Sbjct: 274  RPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAK 333

Query: 114  QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
             ++  + E+  V L N +I+          A  +F    R     N  T+V  L A  + 
Sbjct: 334  DIYLGLKERNAVTL-NGLIAGLVKQQHGEAAAEIFMG-ARDSAAVNVDTYVVLLSAIAEF 391

Query: 174  SFETLGM----EIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
            S    G+    E+HA  +++G    ++ V+N L+ MYA+CG + +A  V   +E +D +S
Sbjct: 392  STAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRIS 451

Query: 229  WNSMLTGFVQNDLYCKA-MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
            WN+++T   QN  YC+A M  +  ++     P     ++ +S+   LG L  G++LH  A
Sbjct: 452  WNTIITALDQNG-YCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDA 510

Query: 288  IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL-KA 346
            +K G   D  + N L+ MY +C  ++    +F  M+A D +SW +I+   A +   + ++
Sbjct: 511  VKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITES 570

Query: 347  LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDV 405
            +++F  +   GL  + +   + L A + L  +   K+IH  +++ G++ D  + NA++  
Sbjct: 571  VQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSC 630

Query: 406  YGKCGNIDYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
            Y K G++D    +F  +  + D +SW SMIS Y++NG   EA++   LM  +    D  T
Sbjct: 631  YAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCT 690

Query: 465  LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
                L+A +S++ L++G E++ F +R     +  V S+LVDMY++CG +D A+KVF+ + 
Sbjct: 691  FSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMS 750

Query: 525  TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
             K+   W SMI+    HG G+ A+++F +M+    +PDH+TF+++L ACSH+GL+  G  
Sbjct: 751  QKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLD 810

Query: 585  FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
            + E+M  DY + P  EHY+C++DLLGRA  L++  ++++ M ++P   +W  +L AC+  
Sbjct: 811  YFELME-DYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQS 869

Query: 645  SNK---ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
             ++   +LG   ++ LLEL+P NP NYVL S   AA  +W+D  + R  M+G+ +KK  G
Sbjct: 870  KHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAG 929

Query: 702  SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
             SW+ + + +H+FIA D+SH  + EIY+KL  + +K+ R  GYV  T++VLH++EEE K 
Sbjct: 930  RSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKI-RNAGYVPLTEYVLHDLEEENKE 988

Query: 762  QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
            ++L  HSE+LA+A+ + +S+ G  IRI KNLRVC DCH+  + +S++ GR++++RD+ RF
Sbjct: 989  ELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRF 1048

Query: 822  HHFEAGVCSCGDYW 835
            HHF+ G CSCGDYW
Sbjct: 1049 HHFKDGKCSCGDYW 1062



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 174/644 (27%), Positives = 323/644 (50%), Gaps = 24/644 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM--RVLGISVDAF 59
           Y K   +  A ++FD +  R   +W  ++  +V +G P      +  M     G    +F
Sbjct: 110 YAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSF 169

Query: 60  TFPCVIKAC--AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK--ARQL 115
           TF  V++AC  +    L    ++HGLV K  + S   + N+L++MY  C       A+++
Sbjct: 170 TFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRV 229

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR----VGLVTNAYTFVAALQACE 171
           FD    + D++ WN+++S Y+  G  +    LFR MQ     + L    +TF + + A  
Sbjct: 230 FDTTPVR-DLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATY 288

Query: 172 DSSFETLGM--EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
            SS  +LG+  ++    +KSG +  +YV +AL++ +AR G + EA  +   L+ +++V+ 
Sbjct: 289 LSSC-SLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTL 347

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQ--GAGQKPDQVCTVNAVSA-SGRLGNLLNGKELHAY 286
           N ++ G V+      A + F   +   A      V  ++A++  S     L  G+E+HA+
Sbjct: 348 NGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAH 407

Query: 287 AIKQGFV-SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
            ++ G +   + + N L++MYAKC  ++   RVF  M A+D ISW TII    QN     
Sbjct: 408 VLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEA 467

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVD 404
           A+  +  ++   +        S L +C+GL  ++  +++H   ++ GL  D  + NA+V 
Sbjct: 468 AMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVK 527

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN-GLANEALELFYLMNEANVESDSI 463
           +YG+CG +     +F S+ + DVVSW S++     +     E++++F  M ++ +  + +
Sbjct: 528 MYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKV 587

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T V+ L+A + LS+L+ GK+++  +++ G   + +V ++L+  YA+ G +D   ++F+ +
Sbjct: 588 TFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRM 647

Query: 524 Q-TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
              +D I W SMI+    +G  + A+D    M       DH TF  +L AC+    +  G
Sbjct: 648 SGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERG 707

Query: 583 KKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
            +     +R   + D   E  + LVD+  +   ++ A +   SM
Sbjct: 708 MEMHAFGLRSHLESDVVVE--SALVDMYSKCGRIDYASKVFHSM 749



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 263/533 (49%), Gaps = 30/533 (5%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +H  V+K G     F+ N LV  YAK      AR++FD M  + + V W  +IS +  SG
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGR-NAVSWTCLISGHVLSG 145

Query: 140 QCLEALGLFREMQR--VGLVTNAYTFVAALQACEDSSFETLG--MEIHAATVKSGQNLQV 195
              +A  LFR M R   G    ++TF + L+AC+DS  + LG  +++H    K+      
Sbjct: 146 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNT 205

Query: 196 YVANALIAMYARC--GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V NALI+MY  C  G    A  V      +D ++WN++++ + +          FR +Q
Sbjct: 206 TVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQ 265

Query: 254 ----GAGQKPDQVCTVNAVSA----SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
               G   +P +    + ++A    S  LG L    +L    +K G  SDL +G+ L+  
Sbjct: 266 YDDSGIELRPTEHTFGSLITATYLSSCSLGLL---DQLFVRVLKSGCSSDLYVGSALVSA 322

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF---RTVQLEGLDADV 362
           +A+   ++    ++  +  ++ ++   +IAG  +      A E+F   R      +D  V
Sbjct: 323 FARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYV 382

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFE 420
           +++ ++    +  + + + +E+H +++R G     + + N +V++Y KCG ID +  VF+
Sbjct: 383 VLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQ 442

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +E++D +SW ++I++   NG    A+  + LM + ++   +   +S LS+ + L +L  
Sbjct: 443 LMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAA 502

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           G++L+   ++ G  L+ SV+++LV MY  CG +    ++FN +   D++ W S++   G+
Sbjct: 503 GQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIM---GV 559

Query: 541 HGRGKVAI----DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
               +  I     +F  M      P+ +TF+  L A +   ++  GK+   +M
Sbjct: 560 MASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVM 612



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 238/488 (48%), Gaps = 30/488 (6%)

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           D+S E+L +E+    VK G    +++AN L+  YA+  ++  A  V   +  +++VSW  
Sbjct: 81  DASPESLHLEV----VKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTC 136

Query: 232 MLTGFVQNDLYCKAMQFFREL--QGAGQKPDQVC---TVNAVSASG--RLGNLLNGKELH 284
           +++G V + L   A   FR +  +G G +P        + A   SG  RLG  +   ++H
Sbjct: 137 LISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAV---QVH 193

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM--GRVFYQMTAQDFISWTTIIAGYAQNNC 342
               K  F S+  + N L+ MY  C     +   RVF     +D I+W  +++ YA+   
Sbjct: 194 GLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGD 253

Query: 343 HLKALELFRTVQLEG----LDADVMIIGSVLMACSGLKC-MSQTKEIHGYIIRKGL-SDL 396
            +    LFR +Q +     L       GS++ A     C +    ++   +++ G  SDL
Sbjct: 254 AICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDL 313

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNE 455
            + +A+V  + + G +D +++++  ++ ++ V+   +I+  V       A E+F    + 
Sbjct: 314 YVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDS 373

Query: 456 ANVESDS-ITLVSALSAASSLSI-LKKGKELNGFIIRKGFNLEG-SVASSLVDMYARCGA 512
           A V  D+ + L+SA++  S+    L+KG+E++  ++R G      +V++ LV+MYA+CGA
Sbjct: 374 AAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGA 433

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +D A +VF  ++ +D I W ++I A   +G  + A+  +  M   S  P +   ++ L +
Sbjct: 434 IDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSS 493

Query: 573 CSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           C+  GL+  G++   + ++    LD    +   LV + G    + E ++   SM      
Sbjct: 494 CAGLGLLAAGQQLHCDAVKWGLYLDTSVSN--ALVKMYGECGRMSECWEIFNSMSAHDVV 551

Query: 632 EVWCALLG 639
             W +++G
Sbjct: 552 S-WNSIMG 558


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 288/797 (36%), Positives = 444/797 (55%), Gaps = 80/797 (10%)

Query: 96  VNSLVAMYAKCYDFRKARQLFDR--MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           V +L+  Y        A  L ++        V  WN +I           AL LFR M+ 
Sbjct: 60  VTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKT 119

Query: 154 VGLVTNAYTFVAALQAC-EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
           +    + YTF    +AC E S+FE LG  IH   ++ G    V+V NA+I+MY +C  + 
Sbjct: 120 LHWTPDHYTFPFVFKACGEISNFE-LGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVV 178

Query: 213 EAAGVLYQLENK---DSVSWNSMLTGFVQNDLYCKAMQFFRELQ-GAGQKPDQVCTVNAV 268
            A  V  +L  +   DSV+WNS+++ +    +   A+  FRE+  G G  PD V  VN +
Sbjct: 179 HARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNIL 238

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
              G LG  L G+++H + ++ G V D+ +GN L+DMYAKC  +    +VF +M  +D +
Sbjct: 239 PVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVV 298

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV-------------------- 368
           +W  ++ GY+QN     AL LF  ++ E +++DV+   SV                    
Sbjct: 299 TWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQM 358

Query: 369 ---------------LMACSGLKCMSQTKEIHGYIIR---KG-----LSDLVILNAIVDV 405
                          L AC+ +  +   KE H Y ++   KG       DL ++NA++D+
Sbjct: 359 CGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDM 418

Query: 406 YGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN--VESD 461
           Y KC +++ +R +F+ I  + +DVV+WT MI  Y  +G AN AL+LF  M + +  +  +
Sbjct: 419 YAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPN 478

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV---ASSLVDMYARCGALDIANK 518
             T+   L A + L+ LK GK+++ +++R+   ++  V   A+ L+DMY++ G +D A  
Sbjct: 479 DFTISCVLMACARLAALKFGKQIHAYVLRRS-RIDSDVLFVANCLIDMYSKSGDVDTAQV 537

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           VF+ +  ++ + WTS++   G+HGR + A  +F +M  E+   D ITFL +LYACSHSG+
Sbjct: 538 VFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM 597

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
                        D+ +DP  EHYAC+VDLLGRA  L EA + +  M IEPT  VW ALL
Sbjct: 598 -------------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALL 644

Query: 639 GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
            ACR+HSN+EL E  AKKLLEL   N G Y L+SN++A +R+WKDV ++   M+ +G+KK
Sbjct: 645 SACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKK 704

Query: 699 TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
            PG SW++    + +F   D++H +S +IY+ LA++ +++        +  F LH+V++E
Sbjct: 705 IPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRI--------KANFSLHDVDDE 756

Query: 759 EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
           EK   L  HSE+LA+AY +L    G+ IRITKNLR+C D HS    +S +   E+++RD+
Sbjct: 757 EKGDQLSEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDS 816

Query: 819 NRFHHFEAGVCSCGDYW 835
           +RFH F+ G CSC  YW
Sbjct: 817 SRFHQFKNGSCSCKGYW 833



 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 183/606 (30%), Positives = 305/606 (50%), Gaps = 76/606 (12%)

Query: 2   YGKCGSVLDAEQLFDK---VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           Y    S+ +A  L +K    S  +V+ WN ++   +    P   L  + RM+ L  + D 
Sbjct: 67  YISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDH 126

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           +TFP V KAC  + + + GA IHG V++ G++S  F+ N++++MY KC     AR++FD 
Sbjct: 127 YTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDE 186

Query: 119 MGEKE--DVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSF 175
           +  +   D V WNSI+S YS       A+ LFREM    G++ +    V  L  C     
Sbjct: 187 LCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGL 246

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G ++H   V+SG    V+V NAL+ MYA+CGKM +A  V  ++  KD V+WN+M+TG
Sbjct: 247 GLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTG 306

Query: 236 FVQNDLY-----------------------------------CKAMQFFRELQGAGQKPD 260
           + QN  +                                   C+AM  FR++ G   +P+
Sbjct: 307 YSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPN 366

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIK-------QGFVSDLQIGNTLMDMYAKCCCVN 313
            V  ++ +SA   +G LL+GKE H Y++K            DL + N L+DMYAKC  + 
Sbjct: 367 VVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLE 426

Query: 314 YMGRVFYQMTAQ--DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD----ADVMIIGS 367
               +F ++  +  D ++WT +I GYAQ+     AL+LF   ++  +D     +   I  
Sbjct: 427 VARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFS--EMFKIDNCIVPNDFTISC 484

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLSD---LVILNAIVDVYGKCGNIDYSRNVFESIES 424
           VLMAC+ L  +   K+IH Y++R+   D   L + N ++D+Y K G++D ++ VF+S+  
Sbjct: 485 VLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK 544

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           ++ VSWTS+++ Y  +G + +A  +F  M +  +  D IT +  L A S   +       
Sbjct: 545 RNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM------- 597

Query: 485 NGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMINANGLH 541
                   F ++  V   + +VD+  R G L  A ++ N +  +   ++W ++++A  +H
Sbjct: 598 -------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIH 650

Query: 542 GRGKVA 547
              ++A
Sbjct: 651 SNEELA 656



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 194/424 (45%), Gaps = 51/424 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTV---FTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISV 56
           MYGKC +V+ A ++FD++  R +    TWN+++  Y     P   +  +  M V  GI  
Sbjct: 170 MYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILP 229

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D      ++  C  L    CG ++HG  ++ G     F+ N+LV MYAKC     A ++F
Sbjct: 230 DTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVF 289

Query: 117 DRMGEKE----------------------------------DVVLWNSIISAYSASGQCL 142
           +RM  K+                                  DVV W+S+IS Y+  G   
Sbjct: 290 ERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGC 349

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK-------SGQNLQV 195
           EA+ +FR+M       N  T ++ L AC        G E H  +VK       +     +
Sbjct: 350 EAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDL 409

Query: 196 YVANALIAMYARCGKMTEAAGVLYQL--ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V NALI MYA+C  +  A  +  ++  +++D V+W  M+ G+ Q+     A+Q F E+ 
Sbjct: 410 AVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMF 469

Query: 254 GAGQ--KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD--LQIGNTLMDMYAKC 309
                  P+       + A  RL  L  GK++HAY +++  +    L + N L+DMY+K 
Sbjct: 470 KIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKS 529

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             V+    VF  M+ ++ +SWT+++ GY  +     A  +F  ++ E L  D +    VL
Sbjct: 530 GDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVL 589

Query: 370 MACS 373
            ACS
Sbjct: 590 YACS 593



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 119/242 (49%), Gaps = 20/242 (8%)

Query: 1   MYGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG--ISV 56
           MY KC S+  A  +FD++    R V TW  M+G Y  +G+    L+ +S M  +   I  
Sbjct: 418 MYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVP 477

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD--FIVNSLVAMYAKCYDFRKARQ 114
           + FT  CV+ ACA L  L  G +IH  VL+     +D  F+ N L+ MY+K  D   A+ 
Sbjct: 478 NDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQV 537

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           +FD M  K + V W S+++ Y   G+  +A  +F EM++  LV +  TF+  L AC  S 
Sbjct: 538 VFDSM-SKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHS- 595

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
               GM+        G +  V     ++ +  R G++ EA  ++  +      V W ++L
Sbjct: 596 ----GMDF-------GVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALL 644

Query: 234 TG 235
           + 
Sbjct: 645 SA 646


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 267/688 (38%), Positives = 411/688 (59%), Gaps = 15/688 (2%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M R  +  N YTF  AL+AC   +    G  IH   + +G    ++V+ AL+ MY +C  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK--PDQVCTVNAV 268
           + +AA +   +  +D V+WN+ML G+  + +Y  A+     +Q    +  P+    V  +
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 269 SASGRLGNLLNGKELHAYAI----------KQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
               + G L  G  +HAY I          K      + +G  L+DMYAKC  + Y  RV
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKC 377
           F  M A++ ++W+ +I G+   +   +A  LF+ +  +GL       I S L AC+ L  
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 378 MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           +   +++H  + + G+ +DL   N+++ +Y K G ID +  +F+ +  KD VS+++++S 
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           YV NG A EA  +F  M   NVE D+ T+VS + A S L+ L+ G+  +G +I +G   E
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
            S+ ++L+DMYA+CG +D++ +VFN + ++D++ W +MI   G+HG GK A  LF +M  
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
             F PD +TF+ LL ACSHSGL+ EGK +  +M   Y L P  EHY C+VDLL R   L+
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EAY+F++SM +     VW ALLGACRV+ N +LG+ V++ + EL P   GN+VL+SN+++
Sbjct: 481 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 540

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           A+ ++ +  +VR+  +  G KK+PG SWIEI   +H+F+  D+SH +S EIY++L  I  
Sbjct: 541 AAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILV 600

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
            +++  GY   T FVL ++EEEEK + L  HSE+LAIAYG+L  +E   I +TKNLRVC 
Sbjct: 601 GIKKL-GYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCG 659

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHF 824
           DCH+  K +S +  R ++VRDANRFHHF
Sbjct: 660 DCHTVIKHISLVKRRAIIVRDANRFHHF 687



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 155/503 (30%), Positives = 256/503 (50%), Gaps = 23/503 (4%)

Query: 54  ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           ++ + +TFP  +KAC+ L D  CG  IH   +  G  +  F+  +L+ MY KC     A 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALG--LFREMQRVGLVTNAYTFVAALQACE 171
            +F  M  + D+V WN++++ Y+  G    A+   L  +MQ   L  NA T VA L    
Sbjct: 66  HIFATMPAR-DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 124

Query: 172 DSSFETLGMEIHAATV----------KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
                  G  +HA  +          KS     V +  AL+ MYA+CG +  A  V   +
Sbjct: 125 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM 184

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG---QKPDQVCTVNAVSASGRLGNLL 278
             ++ V+W++++ GFV      +A   F+ +   G     P  + +  A+ A   L +L 
Sbjct: 185 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS--ALRACASLDHLR 242

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
            G++LHA   K G  +DL  GN+L+ MYAK   ++    +F +M  +D +S++ +++GY 
Sbjct: 243 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 302

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLV 397
           QN    +A  +F+ +Q   ++ D   + S++ ACS L  +   +  HG +I +GL S+  
Sbjct: 303 QNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETS 362

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           I NA++D+Y KCG ID SR VF  + S+D+VSW +MI+ Y  +GL  EA  LF  MN   
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS--SLVDMYARCGALDI 515
              D +T +  LSA S   ++ +GK     ++  G+ L   +     +VD+ +R G LD 
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWF-HVMGHGYGLTPRMEHYICMVDLLSRGGFLDE 481

Query: 516 ANKVFNCVQTK-DLILWTSMINA 537
           A +    +  + D+ +W +++ A
Sbjct: 482 AYEFIQSMPLRADVRVWVALLGA 504



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 226/455 (49%), Gaps = 23/455 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY--SRMRVLGISVDA 58
           MY KC  + DA  +F  +  R +  WNAML  Y  +G     +      +M++  +  +A
Sbjct: 54  MYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNA 113

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLK-CGYDS-------TDFIV--NSLVAMYAKCYD 108
            T   ++   A    L  G  +H   ++ C + +       TD ++   +L+ MYAKC  
Sbjct: 114 STLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGS 173

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVA-AL 167
              AR++FD M  + +V  W+++I  +    +  +A  LF+ M   GL   + T +A AL
Sbjct: 174 LLYARRVFDAMPARNEVT-WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASAL 232

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           +AC       +G ++HA   KSG +  +   N+L++MYA+ G + +A  +  ++  KD+V
Sbjct: 233 RACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 292

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           S++++++G+VQN    +A   F+++Q    +PD    V+ + A   L  L +G+  H   
Sbjct: 293 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 352

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           I +G  S+  I N L+DMYAKC  ++   +VF  M ++D +SW T+IAGY  +    +A 
Sbjct: 353 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 412

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAI 402
            LF  +   G   D +    +L ACS    + + K       HGY +   +   + +   
Sbjct: 413 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICM--- 469

Query: 403 VDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           VD+  + G +D +    +S+  + DV  W +++ +
Sbjct: 470 VDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 277/783 (35%), Positives = 440/783 (56%), Gaps = 5/783 (0%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHG-LVLKCGYDSTD-FIVNSLVAMYAKCYDFRKAR 113
           VD+F     ++ C    D   G  +HG +V + G    D F  N L+ MY K      AR
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           +LFDRM E+ ++V + +++ A++  G    A  LFR ++  G   N +     L+     
Sbjct: 117 RLFDRMPER-NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
               L   +H+   K G +   +V + LI  Y+ C  +++A  V   +  KD+V W +M+
Sbjct: 176 DAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           + + +ND    A + F +++ +G KP+     + + A+  L +++ GK +H  AIK    
Sbjct: 236 SCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLND 295

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           ++  +G  L+DMYAKC  +      F  +   D I  + +I+ YAQ+N + +A ELF  +
Sbjct: 296 TEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRL 355

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
               +  +   + SVL AC+ +  +   K+IH + I+ G  SDL + NA++D Y KC ++
Sbjct: 356 MRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM 415

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D S  +F S+   + VSW +++  +  +GL  EAL +F  M  A +    +T  S L A 
Sbjct: 416 DSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           +S + ++   +++  I +  FN +  + +SL+D YA+CG +  A KVF  +  +D+I W 
Sbjct: 476 ASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWN 535

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           ++I+   LHG+   A++LF +M   +   + ITF+ALL  CS +GL+N G    + MR D
Sbjct: 536 AIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRID 595

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
           + + P  EHY C+V LLGRA  L +A QF+  +   P+A VW ALL +C +H N  LG  
Sbjct: 596 HGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRF 655

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
            A+K+LE++P +   YVL+SN++AA+     V  +R  MR  G++K PG SW+EI  +IH
Sbjct: 656 SAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIH 715

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLA 772
           +F      H +   I   L  +  K  RE GY+     VLH+V++E+K +ML+ HSERLA
Sbjct: 716 AFSVGSVDHPDMRVINAMLEWLNLKTSRE-GYIPDINVVLHDVDKEQKTRMLWVHSERLA 774

Query: 773 IAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           +AYG++ +  G  IRI KNLR C+DCH+   ++S++  RE++VRD NRFHHFE G CSCG
Sbjct: 775 LAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCG 834

Query: 833 DYW 835
           DYW
Sbjct: 835 DYW 837



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 162/582 (27%), Positives = 291/582 (50%), Gaps = 9/582 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGK G +  A +LFD++ +R + ++  ++ A+   G+       + R+R  G  V+ F 
Sbjct: 105 MYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFV 164

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++K    +        +H    K G+D   F+ + L+  Y+ C     A  +F+ + 
Sbjct: 165 LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIV 224

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V+W +++S YS +     A  +F +M+  G   N +   + L+A        LG 
Sbjct: 225 RK-DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGK 283

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +K+  + + +V  AL+ MYA+CG + +A      +   D +  + M++ + Q++
Sbjct: 284 GIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSN 343

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A + F  L  +   P++    + + A   +  L  GK++H +AIK G  SDL +GN
Sbjct: 344 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 403

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LMD YAKC  ++   ++F  +   + +SW TI+ G++Q+    +AL +F  +Q   +  
Sbjct: 404 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
             +   SVL AC+    +    +IH  I +    +D VI N+++D Y KCG I  +  VF
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF 523

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +  +D++SW ++IS Y  +G A +ALELF  MN++NVES+ IT V+ LS  SS  ++ 
Sbjct: 524 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN 583

Query: 480 KGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMINA 537
            G  L +   I  G        + +V +  R G L+ A +    + +    ++W +++++
Sbjct: 584 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 643

Query: 538 NGLHGRGKVAIDLFYKMEAESFAP-DHITFLAL--LYACSHS 576
             +H    VA+  F   +     P D  T++ L  +YA + S
Sbjct: 644 CIIH--KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGS 683



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 240/495 (48%), Gaps = 25/495 (5%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  C  V DAE +F+ + ++    W AM+  Y  N  P      +S+MRV G   + F  
Sbjct: 207 YSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFAL 266

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+KA   L  +  G  IHG  +K   D+   +  +L+ MYAKC D + AR  F+ M  
Sbjct: 267 TSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE-MIP 325

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            +DV+L + +IS Y+ S Q  +A  LF  + R  ++ N Y+  + LQAC +      G +
Sbjct: 326 YDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQ 385

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   +K G    ++V NAL+  YA+C  M  +  +   L + + VSWN+++ GF Q+ L
Sbjct: 386 IHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGL 445

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F E+Q A     QV   + + A     ++ +  ++H    K  F +D  IGN+
Sbjct: 446 GEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNS 505

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+D YAKC  +    +VF  +  +D ISW  II+GYA +     ALELF  +    ++++
Sbjct: 506 LIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESN 565

Query: 362 VMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            +   ++L  CS       GL      +  HG  I+  +        IV + G+ G ++ 
Sbjct: 566 DITFVALLSVCSSTGLVNHGLSLFDSMRIDHG--IKPSMEH---YTCIVRLLGRAGRLND 620

Query: 415 SRNVFESIES-KDVVSWTSMISS-YVHNGLANEALELF----YLMNEANVESDSITLVSA 468
           +      I S    + W +++SS  +H    N AL  F     L  E   E+  + L + 
Sbjct: 621 ALQFIGDIPSAPSAMVWRALLSSCIIHK---NVALGRFSAEKILEIEPQDETTYVLLSNM 677

Query: 469 LSAASSL---SILKK 480
            +AA SL   ++L+K
Sbjct: 678 YAAAGSLDQVALLRK 692


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 289/873 (33%), Positives = 448/873 (51%), Gaps = 82/873 (9%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLR-VLETYSRMRVLGISVDAFTFPCV 64
           G    A  +F     R    WN+ +  + S+   L  VLE +  +   G+  D+  +   
Sbjct: 80  GDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVA 139

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           +K C  + D+  G +IHG ++K G+D   ++  +L+  Y +C+   KA Q+F  M   E 
Sbjct: 140 LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPE- 198

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
            +LWN  I     S +  + + LFR+MQ   L     T V  LQAC          +IH 
Sbjct: 199 ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHG 258

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
              + G +  V + N LI+MY++ GK+  A  V   +EN+++ SWNSM++ +        
Sbjct: 259 YVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLND 318

Query: 245 AMQFFREL-----------------------------------QGAGQKPDQVCTVNAVS 269
           A   F EL                                   QG G KP+     + + 
Sbjct: 319 AWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQ 378

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A   LG L  GKE H Y ++ GF  D+ +G +L+DMY K   +     VF  M  ++  +
Sbjct: 379 AISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFA 438

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADV-----MIIGSVLMAC--SGLKCMSQTK 382
           W ++++GY+       AL L   ++ EG+  D+     MI G  +  C    L  + QTK
Sbjct: 439 WNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTK 498

Query: 383 EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
            +       GL+                               +VVSWT++IS     G 
Sbjct: 499 SL-------GLT------------------------------PNVVSWTALISGSSQAGN 521

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
             ++L+ F  M +  V  +S ++   L A +SLS+L+KGKE++   IR GF  +  VA++
Sbjct: 522 NRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATA 581

Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           L+DMY++  +L  A+KVF  +Q K L  W  MI    + G GK AI +F +M+     PD
Sbjct: 582 LIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPD 641

Query: 563 HITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV 622
            ITF ALL AC +SGLI EG K+ + M  DY++ P  EHY C+VDLLGRA +L+EA+  +
Sbjct: 642 AITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI 701

Query: 623 RSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWK 682
            +M ++P A +W ALLG+CR+H N +  E  AK L +L+P N  NY+L+ N+++   +W+
Sbjct: 702 HTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWE 761

Query: 683 DVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREG 742
           D++ +R  M  +G++     SWI+I  ++H F + +K H ++ +IY +L ++  ++++  
Sbjct: 762 DMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKL- 820

Query: 743 GYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFC 802
           GYV     V  N++E EK ++L  H+E+LAI YG++K   G  IR+ KN R+C DCHS  
Sbjct: 821 GYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAA 880

Query: 803 KLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           K +S +  REL +RD  RFHHF  G CSC D+W
Sbjct: 881 KYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 149/588 (25%), Positives = 264/588 (44%), Gaps = 78/588 (13%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YG+C  +  A Q+F ++       WN  +   + + +  + +E + +M+   +  +  T 
Sbjct: 178 YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATI 237

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V++AC  +  L+   +IHG V + G DS   + N L++MY+K      AR++FD M E
Sbjct: 238 VRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM-E 296

Query: 122 KEDVVLWNSIISAYSASG------------------------QCL-----------EALG 146
             +   WNS+IS+Y+A G                         CL           E L 
Sbjct: 297 NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLN 356

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           + + MQ  G   N+ +  + LQA  +  F  +G E H   +++G +  VYV  +LI MY 
Sbjct: 357 ILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYV 416

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +   +T A  V   ++N++  +WNS+++G+    ++  A++   +++  G KPD V    
Sbjct: 417 KNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTW-- 474

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA-- 324
                                            N ++  YA   C      V +Q  +  
Sbjct: 475 ---------------------------------NGMISGYAMWGCGKEALAVLHQTKSLG 501

Query: 325 --QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
              + +SWT +I+G +Q   +  +L+ F  +Q EG+  +   I  +L AC+ L  + + K
Sbjct: 502 LTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGK 561

Query: 383 EIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
           EIH   IR G + D+ +  A++D+Y K  ++  +  VF  I++K + SW  MI  +   G
Sbjct: 562 EIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFG 621

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVA 500
           L  EA+ +F  M +  V  D+IT  + LSA  +  ++ +G K  +  I            
Sbjct: 622 LGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHY 681

Query: 501 SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA 547
             +VD+  R G LD A  + + +  K D  +W +++ +  +H   K A
Sbjct: 682 CCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFA 729



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 239/504 (47%), Gaps = 48/504 (9%)

Query: 182 IHAATVKSGQNLQV-YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN- 239
           +HA  +K  Q       A  LI+ Y   G    AA V Y    ++ + WNS +  F  + 
Sbjct: 52  MHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSA 111

Query: 240 -DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
             L+   ++ F+EL G G   D      A+    R+ ++  G E+H   IK+GF  D+ +
Sbjct: 112 GSLHI-VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYL 170

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
              LM+ Y +C  +    +VF++M   + + W   I    Q+    K +ELFR +Q   L
Sbjct: 171 RCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFL 230

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
            A+   I  VL AC  +  ++  K+IHGY+ R GL SD+ + N ++ +Y K G ++ +R 
Sbjct: 231 KAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARR 290

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT------------- 464
           VF+S+E+++  SW SMISSY   G  N+A  LFY +  ++++ D +T             
Sbjct: 291 VFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGY 350

Query: 465 ----------------------LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
                                 + S L A S L  L  GKE +G+++R GF+ +  V +S
Sbjct: 351 KEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTS 410

Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           L+DMY +  +L  A  VF+ ++ +++  W S+++     G  + A+ L  +ME E   PD
Sbjct: 411 LIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPD 470

Query: 563 HITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE--HYACLVDLLGRANHLEEAYQ 620
            +T+  ++   +  G    GK+ L ++     L   P    +  L+    +A +  ++ +
Sbjct: 471 LVTWNGMISGYAMWGC---GKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLK 527

Query: 621 FVRSMQIE---PTAEVWCALLGAC 641
           F   MQ E   P +     LL AC
Sbjct: 528 FFAQMQQEGVMPNSASITCLLRAC 551



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 40/328 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K  S+  A+ +FD +  R +F WN+++  Y   G     L   ++M   GI  D  T
Sbjct: 414 MYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVT 473

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +I   AM                CG ++   +  +                    +G
Sbjct: 474 WNGMISGYAM--------------WGCGKEALAVLHQT------------------KSLG 501

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              +VV W ++IS  S +G   ++L  F +MQ+ G++ N+ +    L+AC   S    G 
Sbjct: 502 LTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGK 561

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH  ++++G    V+VA ALI MY++   +  A  V  +++NK   SWN M+ GF    
Sbjct: 562 EIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFG 621

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A+  F E+Q  G  PD +     +SA    G +  G     +      ++D +I  
Sbjct: 622 LGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG-----WKYFDSMITDYRIVP 676

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            L + Y  CC V+ +GR  Y   A D I
Sbjct: 677 RL-EHY--CCMVDLLGRAGYLDEAWDLI 701



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 17/143 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K  S+ +A ++F ++  +T+ +WN M+  +   G     +  ++ M+ +G+  DA T
Sbjct: 585 MYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAIT 644

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDS--TDF-IVNSL------VAMYAKCYDFRK 111
           F  ++ AC     +  G K         +DS  TD+ IV  L      V +  +     +
Sbjct: 645 FTALLSACKNSGLIGEGWKY--------FDSMITDYRIVPRLEHYCCMVDLLGRAGYLDE 696

Query: 112 ARQLFDRMGEKEDVVLWNSIISA 134
           A  L   M  K D  +W +++ +
Sbjct: 697 AWDLIHTMPLKPDATIWGALLGS 719


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/683 (36%), Positives = 419/683 (61%), Gaps = 10/683 (1%)

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGV 217
           +A+TF   L+A +         ++HA  ++ G      + + AL+  Y R G++ +A   
Sbjct: 70  DAFTFPPLLRAAQGPGTAA---QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++ ++D  +WN+ML+G  +N    +A+  F  +   G   D V   + +     LG+ 
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
                +H YA+K G   +L + N ++D+Y K   +  + +VF  M+++D ++W +II+G+
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSD 395
            Q      A+E+F  ++  G+  DV+ + S+  A +    +   + +H Y++R+G  + D
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMN 454
           ++  NAIVD+Y K   I+ ++ +F+S+  +D VSW ++I+ Y+ NGLA+EA+ ++ ++  
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              ++    T VS L A S L  L++G  ++   I+ G NL+  V + ++D+YA+CG LD
Sbjct: 367 HEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLD 426

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A  +F     +    W ++I+  G+HG G  A+ LF +M+ E  +PDH+TF++LL ACS
Sbjct: 427 EAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACS 486

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           H+GL+++G+ F  +M+  Y + P  +HYAC+VD+ GRA  L++A+ F+R+M I+P + +W
Sbjct: 487 HAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIW 546

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALLGACR+H N E+G++ ++ L ELDP N G YVL+SN++A   KW  V++VR  +R  
Sbjct: 547 GALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQ 606

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKS--HSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
            L+KTPG S IE+   ++ F + ++   H + +EI ++L ++  K+ R  GYV    FVL
Sbjct: 607 NLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKI-RSLGYVPDYSFVL 665

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
            +VEE+EK Q+L  HSERLAIA+G++ +   + + I KNLRVC DCH+  K +S++  RE
Sbjct: 666 QDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITERE 725

Query: 813 LVVRDANRFHHFEAGVCSCGDYW 835
           ++VRD+NRFHHF+ G CSCGD+W
Sbjct: 726 IIVRDSNRFHHFKDGYCSCGDFW 748



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 260/511 (50%), Gaps = 13/511 (2%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQL 115
           DAFTFP +++A    +     A++H   L+ G    D F   +LV  Y +    R A + 
Sbjct: 70  DAFTFPPLLRAA---QGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M  + DV  WN+++S    + +  EA+GLF  M   G+  +A T  + L  C     
Sbjct: 127 FDEMRHR-DVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGD 185

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             L + +H   VK G + +++V NA+I +Y + G + E   V   + ++D V+WNS+++G
Sbjct: 186 RALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISG 245

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VS 294
             Q      A++ F  ++ +G  PD +  ++  SA  + G++  G+ +H Y +++G+ V 
Sbjct: 246 HEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVG 305

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D+  GN ++DMYAK   +    R+F  M  +D +SW T+I GY QN    +A+ ++  +Q
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQ 365

Query: 355 L-EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
             EGL        SVL A S L  + Q   +H   I+ GL+ D+ +   ++D+Y KCG +
Sbjct: 366 KHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKL 425

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D +  +FE    +    W ++IS    +G   +AL LF  M +  +  D +T VS L+A 
Sbjct: 426 DEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485

Query: 473 SSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQTKDLIL 530
           S   ++ +G+   N      G        + +VDM+ R G LD A + + N     D  +
Sbjct: 486 SHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAI 545

Query: 531 WTSMINANGLHGR---GKVAIDLFYKMEAES 558
           W +++ A  +HG    GKVA    ++++ ++
Sbjct: 546 WGALLGACRIHGNVEMGKVASQNLFELDPKN 576



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 219/440 (49%), Gaps = 6/440 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G V DA + FD++  R V  WNAML     N      +  + RM + G++ DA T 
Sbjct: 114 YLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTV 173

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+  C +L D      +H   +K G D   F+ N+++ +Y K     + R++FD M  
Sbjct: 174 SSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSS 233

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D+V WNSIIS +   GQ   A+ +F  M+  G+  +  T ++   A         G  
Sbjct: 234 R-DLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRS 292

Query: 182 IHAATVKSGQNL-QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +H   V+ G ++  +   NA++ MYA+  K+  A  +   +  +D+VSWN+++TG++QN 
Sbjct: 293 VHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNG 352

Query: 241 LYCKAMQFFRELQG-AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           L  +A+  +  +Q   G KP Q   V+ + A   LG L  G  +HA +IK G   D+ +G
Sbjct: 353 LASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVG 412

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             ++D+YAKC  ++    +F Q   +    W  +I+G   +    KAL LF  +Q EG+ 
Sbjct: 413 TCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGIS 472

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYI-IRKGLSDLVILNA-IVDVYGKCGNIDYSRN 417
            D +   S+L ACS    + Q +     +    G+  +    A +VD++G+ G +D + +
Sbjct: 473 PDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFD 532

Query: 418 VFESIESK-DVVSWTSMISS 436
              ++  K D   W +++ +
Sbjct: 533 FIRNMPIKPDSAIWGALLGA 552



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 167/335 (49%), Gaps = 21/335 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGK G + +  ++FD +S R + TWN+++  +   G+    +E +  MR  G+S D  T
Sbjct: 214 VYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLT 273

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRM 119
              +  A A   D+  G  +H  +++ G+D  D I  N++V MYAK      A+++FD M
Sbjct: 274 LLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSM 333

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETL 178
             + D V WN++I+ Y  +G   EA+ ++  MQ+  GL     TFV+ L A         
Sbjct: 334 PVR-DAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQ 392

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  +HA ++K+G NL VYV   +I +YA+CGK+ EA  +  Q   + +  WN++++G   
Sbjct: 393 GTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGV 452

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH-----AYAIKQGFV 293
           +    KA+  F ++Q  G  PD V  V+ ++A    G +  G+        AY IK    
Sbjct: 453 HGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIK---- 508

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
                   +   YA  C V+  GR      A DFI
Sbjct: 509 -------PIAKHYA--CMVDMFGRAGQLDDAFDFI 534


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 249/659 (37%), Positives = 404/659 (61%), Gaps = 3/659 (0%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++HA  + +G     ++ N L+ MY++CG++  A  +   +  ++ VSW +M++G  Q
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N  + +A++ F  ++  G+ P Q    +A+ A   LG++  GK++H  A+K G  S+L +
Sbjct: 84  NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G+ L DMY+KC  +    +VF +M  +D +SWT +I GY++     +AL  F+ +  E +
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D  ++ S L AC  LK     + +H  +++ G  SD+ + NA+ D+Y K G+++ + N
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 263

Query: 418 VFE-SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           VF    E ++VVS+T +I  YV      + L +F  +    +E +  T  S + A ++ +
Sbjct: 264 VFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA 323

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L++G +L+  +++  F+ +  V+S LVDMY +CG L+ A + F+ +     I W S+++
Sbjct: 324 ALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVS 383

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
             G HG GK AI +F +M      P+ ITF++LL  CSH+GL+ EG  +   M   Y + 
Sbjct: 384 VFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVV 443

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHY+C++DLLGRA  L+EA +F+  M  EP A  WC+ LGACR+H +KE+G++ A+K
Sbjct: 444 PGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEK 503

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L++L+P N G  VL+SN++A  R+W+DV  VRMRMR   +KK PG SW+++G K H F A
Sbjct: 504 LVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGA 563

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D SH     IY+KL  + +++ +  GYV +T  V  ++++  K ++L+ HSER+A+A+ 
Sbjct: 564 EDWSHPRKSAIYEKLDTLLDQI-KAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFA 622

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++    G  I + KNLRVCVDCHS  K +S++ GR+++VRD +RFHHF  G CSCGDYW
Sbjct: 623 LISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 267/516 (51%), Gaps = 10/516 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           VI+  A  K L  G ++H L++  GY    F+ N LV MY+KC +   A +LFD M ++ 
Sbjct: 11  VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQR- 69

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           ++V W ++IS  S + +  EA+  F  M+  G V   + F +A++AC       +G ++H
Sbjct: 70  NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 129

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              +K G   +++V + L  MY++CG M +A  V  ++  KD VSW +M+ G+ +   + 
Sbjct: 130 CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE 189

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+  F+++       DQ    + + A G L     G+ +H+  +K GF SD+ +GN L 
Sbjct: 190 EALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT 249

Query: 304 DMYAKCCCVNYMGRVF-YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           DMY+K   +     VF      ++ +S+T +I GY +     K L +F  ++ +G++ + 
Sbjct: 250 DMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNE 309

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFES 421
               S++ AC+    + Q  ++H  +++     D  + + +VD+YGKCG ++ +   F+ 
Sbjct: 310 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDE 369

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           I     ++W S++S +  +GL  +A+++F  M +  V+ ++IT +S L+  S   ++++G
Sbjct: 370 IGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429

Query: 482 KELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANG 539
            +    + +    + G    S ++D+  R G L  A +  N +    +   W S + A  
Sbjct: 430 LDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACR 489

Query: 540 LHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +HG    GK+A +   K+E ++     +  L+ +YA
Sbjct: 490 IHGDKEMGKLAAEKLVKLEPKNSGA--LVLLSNIYA 523



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 189/374 (50%), Gaps = 2/374 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A +LFD + QR + +W AM+     N +    + T+  MR+ G     F 
Sbjct: 49  MYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFA 108

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   I+ACA L  ++ G ++H L LK G  S  F+ ++L  MY+KC     A ++F+ M 
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K++V  W ++I  YS  G+  EAL  F++M    +  + +   + L AC        G 
Sbjct: 169 CKDEVS-WTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGR 227

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL-YQLENKDSVSWNSMLTGFVQN 239
            +H++ VK G    ++V NAL  MY++ G M  A+ V     E ++ VS+  ++ G+V+ 
Sbjct: 228 SVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVET 287

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +   K +  F EL+  G +P++    + + A      L  G +LHA  +K  F  D  + 
Sbjct: 288 EQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 347

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           + L+DMY KC  +    + F ++     I+W ++++ + Q+     A+++F  +   G+ 
Sbjct: 348 SILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVK 407

Query: 360 ADVMIIGSVLMACS 373
            + +   S+L  CS
Sbjct: 408 PNAITFISLLTGCS 421



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 200/382 (52%), Gaps = 6/382 (1%)

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D     + +    +   L  GK+LHA  I  G+     + N L++MY+KC  +++  ++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
             M  ++ +SWT +I+G +QN+   +A+  F  +++ G         S + AC+ L  + 
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             K++H   ++ G+ S+L + + + D+Y KCG +  +  VFE +  KD VSWT+MI  Y 
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
             G   EAL  F  M +  V  D   L S L A  +L   K G+ ++  +++ GF  +  
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243

Query: 499 VASSLVDMYARCGALDIANKVFNC-VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
           V ++L DMY++ G ++ A+ VF    + ++++ +T +I+      + +  + +F ++  +
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
              P+  TF +L+ AC++   + +G +   ++M+ ++  DP+    + LVD+ G+   LE
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLE 361

Query: 617 EAYQFVRSMQIEPTAEVWCALL 638
           +A Q    +  +PT   W +L+
Sbjct: 362 QAIQAFDEIG-DPTEIAWNSLV 382



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 165/329 (50%), Gaps = 8/329 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++ DA ++F+++  +   +W AM+  Y   GE    L  + +M    +++D   
Sbjct: 150 MYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHV 209

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + AC  LK    G  +H  V+K G++S  F+ N+L  MY+K  D   A  +F    
Sbjct: 210 LCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS 269

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  +VV +  +I  Y  + Q  + L +F E++R G+  N +TF + ++AC + +    G 
Sbjct: 270 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 329

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +K   +   +V++ L+ MY +CG + +A     ++ +   ++WNS+++ F Q+ 
Sbjct: 330 QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHG 389

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L   A++ F  +   G KP+ +  ++ ++     G +  G + + Y++ + +        
Sbjct: 390 LGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD-YFYSMDKTY-------G 441

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
            +       C ++ +GR      A++FI+
Sbjct: 442 VVPGEEHYSCVIDLLGRAGRLKEAKEFIN 470


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 253/642 (39%), Positives = 396/642 (61%), Gaps = 6/642 (0%)

Query: 199 NALIAMYARCG----KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           N L+ M  RC            + +Q++  +   WN+M+ G V ND +  A++F+  ++ 
Sbjct: 46  NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G  P+       + A  RL +L  G ++H   +K GF  D+ +  +L+ +YAKC  +  
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED 165

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             +VF  +  ++ +SWT II+GY       +A+++FR +    L  D   I  VL AC+ 
Sbjct: 166 AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQ 225

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L  ++  + IH  I+  G+  ++ +  ++VD+Y KCGN++ +R+VF+ +  KD+VSW +M
Sbjct: 226 LGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAM 285

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I  Y  NGL  EA++LF  M   NV+ D  T+V  LSA + L  L+ G+ ++G + R  F
Sbjct: 286 IQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEF 345

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
                + ++L+D+YA+CG++  A +VF  ++ KD ++W ++I+   ++G  K++  LF +
Sbjct: 346 LYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQ 405

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           +E     PD  TF+ LL  C+H+GL++EG+++   M   + L P  EHY C+VDLLGRA 
Sbjct: 406 VEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAG 465

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISN 673
            L+EA+Q +R+M +E  A VW ALLGACR+H + +L E+  K+L+EL+P N GNYVL+SN
Sbjct: 466 LLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSN 525

Query: 674 VFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
           +++A+ KW +  +VR+ M    ++K PG SWIE+   +H F+  DK H  S++IY KL E
Sbjct: 526 IYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDE 585

Query: 734 ITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLR 793
           +T+K+ +  GYV  T FVL ++EEEEK   L  HSE+LAIA+G++ +T  ++IR+ KNLR
Sbjct: 586 LTKKM-KVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLR 644

Query: 794 VCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           VC DCH   KL+S + GRE+ VRD NRFH F  G CSC DYW
Sbjct: 645 VCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 230/464 (49%), Gaps = 5/464 (1%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           LF ++ Q  +F WN M+   VSN      +E Y  MR  G   + FTFP V+KACA L D
Sbjct: 68  LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
           L  G KIH LV+K G+D   F+  SLV +YAKC     A ++FD + +K +VV W +IIS
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDK-NVVSWTAIIS 186

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
            Y   G+  EA+ +FR +  + L  +++T V  L AC        G  IH   ++ G   
Sbjct: 187 GYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVR 246

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V+V  +L+ MYA+CG M +A  V   +  KD VSW +M+ G+  N L  +A+  F ++Q
Sbjct: 247 NVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQ 306

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
               KPD    V  +SA  RLG L  G+ +     +  F+ +  +G  L+D+YAKC  ++
Sbjct: 307 RENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMS 366

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
               VF  M  +D + W  II+G A N     +  LF  V+  G+  D      +L  C+
Sbjct: 367 RAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCT 426

Query: 374 GLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSW 430
               + + +     + R       +     +VD+ G+ G +D +  +  ++  + + + W
Sbjct: 427 HAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVW 486

Query: 431 TSMISS-YVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +++ +  +H       L L  L+      S +  L+S + +A+
Sbjct: 487 GALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSAN 530



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 255/485 (52%), Gaps = 11/485 (2%)

Query: 97  NSLVAMYAKC-YDFRKA---RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
           N L+ M  +C +DF      R LF ++ ++ ++ LWN++I    ++    +A+  +  M+
Sbjct: 46  NYLLNMILRCSFDFSDTNYTRFLFHQI-KQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
             G + N +TF   L+AC       LG++IH   VK G +  V+V  +L+ +YA+CG + 
Sbjct: 105 SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLE 164

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
           +A  V   + +K+ VSW ++++G++    + +A+  FR L      PD    V  +SA  
Sbjct: 165 DAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           +LG+L +G+ +H   ++ G V ++ +G +L+DMYAKC  +     VF  M  +D +SW  
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGA 284

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-K 391
           +I GYA N    +A++LF  +Q E +  D   +  VL AC+ L  +   + + G + R +
Sbjct: 285 MIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNE 344

Query: 392 GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
            L + V+  A++D+Y KCG++  +  VF+ ++ KD V W ++IS    NG    +  LF 
Sbjct: 345 FLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFG 404

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYAR 509
            + +  ++ D  T +  L   +   ++ +G+     + R  F+L  S+     +VD+  R
Sbjct: 405 QVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRF-FSLTPSIEHYGCMVDLLGR 463

Query: 510 CGALDIANKVF-NCVQTKDLILWTSMINANGLHGRGKVA-IDLFYKMEAESFAPDHITFL 567
            G LD A+++  N     + I+W +++ A  +H   ++A + L   +E E +   +   L
Sbjct: 464 AGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLL 523

Query: 568 ALLYA 572
           + +Y+
Sbjct: 524 SNIYS 528



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 140/260 (53%), Gaps = 1/260 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + DA ++FD +  + V +W A++  Y+  G+    ++ + R+  + ++ D+FT
Sbjct: 156 LYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFT 215

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  L DL+ G  IH  +++ G     F+  SLV MYAKC +  KAR +FD M 
Sbjct: 216 IVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP 275

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK D+V W ++I  Y+ +G   EA+ LF +MQR  +  + YT V  L AC       LG 
Sbjct: 276 EK-DIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGE 334

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +     ++       +  ALI +YA+CG M+ A  V   ++ KD V WN++++G   N 
Sbjct: 335 WVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNG 394

Query: 241 LYCKAMQFFRELQGAGQKPD 260
               +   F +++  G KPD
Sbjct: 395 YVKISFGLFGQVEKLGIKPD 414



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 3/136 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCGS+  A ++F  + ++    WNA++     NG        + ++  LGI  D  T
Sbjct: 358 LYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNT 417

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI--VNSLVAMYAKCYDFRKARQLFDR 118
           F  ++  C     +D G +    + +  +  T  I     +V +  +     +A QL   
Sbjct: 418 FIGLLCGCTHAGLVDEGRRYFNSMYRF-FSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRN 476

Query: 119 MGEKEDVVLWNSIISA 134
           M  + + ++W +++ A
Sbjct: 477 MPMEANAIVWGALLGA 492


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/769 (35%), Positives = 440/769 (57%), Gaps = 25/769 (3%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDF---RKARQLFDRMGEKEDVVLWNSIISA 134
           A+ H   +  GY    F + +L  +  K +DF   R AR LF  +  K D+ L+N ++  
Sbjct: 29  AQTHAQFILNGYR---FDLATLTKLTQKLFDFSATRHARALFFSV-PKPDIFLFNVLVRG 84

Query: 135 YSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
           +S +     ++ L+  ++R   L  + +T+  A+ AC +     L   +HA ++  G   
Sbjct: 85  FSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---LHAHSIIDGYGS 141

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V+V +AL+ +Y +  ++  A  V   +  +D+V WN+M+ G V+N  +  ++Q FRE+ 
Sbjct: 142 NVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMV 201

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
             G + D       + A+  L  L  G  +   A+K GF     +   L+ +Y+KC  VN
Sbjct: 202 ADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVN 261

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
               +F ++   D I++  +I+G+  N     +++LFR +   G       I  ++   S
Sbjct: 262 TARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHS 321

Query: 374 GLKCMSQTKEIHGYIIRKGLSDLVILNAIVD-----VYGKCGNIDYSRNVFESIESKDVV 428
               +     IHG+ ++ G    +ILN  V      +Y K   ID +R++F+    K VV
Sbjct: 322 PFGHLHLACSIHGFCVKSG----IILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVV 377

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           +W +MIS Y  NG    A+ LF  M +     +++T+ + LSA + L  L  GK ++  I
Sbjct: 378 AWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLI 437

Query: 489 IRKGFNLEGS--VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
             K  NLE +  V+++LVDMYA+CG +  A ++F+ +  K+ + W +MI   GLHG G  
Sbjct: 438 --KSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHE 495

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           A+ L+ +M    + P  +TFL++LYACSH+GL+ EG++    M   Y+++P  EHYAC+V
Sbjct: 496 ALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMV 555

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           D+LGR+  LE+A +F++ M +EP   VW  LLGAC +H + ++  + +++L ELDPG+ G
Sbjct: 556 DILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVG 615

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
            YVL+SN+++  R +     +R  ++   L K+PG + IE+    H F++ D+SHS + +
Sbjct: 616 YYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATD 675

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
           IY KL ++T K+ RE GY A+T   LH+VEEEEK   +  HSE+LAIA+G++ +  G+ I
Sbjct: 676 IYAKLEKLTGKM-REMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEI 734

Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           RI KNLRVC+DCH+  K +S++  R +VVRDANRFHHF+ G+CSCGDYW
Sbjct: 735 RIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 212/415 (51%), Gaps = 3/415 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K   V+ A ++FD + +R    WN M+   V N      ++ +  M   G+ VD+ T
Sbjct: 152 LYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSST 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ A A L++L  G  I  L LK G+   D+++  L+++Y+KC D   AR LF R+ 
Sbjct: 212 VTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRI- 270

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D++ +N++IS ++A+G    ++ LFRE+   G   ++ T V  +          L  
Sbjct: 271 NRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLAC 330

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   VKSG  L   V+ A  A+Y +  ++  A  +  +   K  V+WN+M++G+ QN 
Sbjct: 331 SIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNG 390

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+  F+E+      P+ V     +SA  +LG+L  GK +H     +    ++ +  
Sbjct: 391 STETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVST 450

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  ++   ++F  M+ ++ ++W T+I GY  +    +AL+L+  +   G + 
Sbjct: 451 ALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNP 510

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN--AIVDVYGKCGNID 413
             +   SVL ACS    + + +EI   ++ K   + +I +   +VD+ G+ G ++
Sbjct: 511 SAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLE 565



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 9/338 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  LF ++++  +  +NAM+  + +NG     ++ +  +   G  V + T
Sbjct: 253 LYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSST 312

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I   +    L     IHG  +K G      +  +  A+Y K  +   AR LFD   
Sbjct: 313 IVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESP 372

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK  VV WN++IS Y+ +G    A+ LF+EM +     NA T    L AC      + G 
Sbjct: 373 EKT-VVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGK 431

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H           +YV+ AL+ MYA+CG ++EA  +   +  K++V+WN+M+ G+  + 
Sbjct: 432 WVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHG 491

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ + E+   G  P  V  ++ + A    G +  G+E     I    V+  +I  
Sbjct: 492 YGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEE-----IFHNMVNKYRI-E 545

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
            L++ YA  C V+ +GR      A +FI    +  G A
Sbjct: 546 PLIEHYA--CMVDILGRSGQLEKALEFIKKMPVEPGPA 581


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/686 (37%), Positives = 411/686 (59%), Gaps = 10/686 (1%)

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEA 214
           L  +++TF   ++A    +      ++HA  ++ G  +  V+ + +L+  Y R G++ EA
Sbjct: 65  LRPDSFTFPPLVRAAPGPASAA---QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121

Query: 215 AGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
             V  ++  +D  +WN+ML+G  +N     A+     + G G   D V   + +     L
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G+      +H YA+K G   +L + N L+D+Y K   +     VF  M  +D ++W +II
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-- 392
           +   Q      A+ELF  +   G+  DV+ + S+  A +        K +H Y+ R+G  
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWD 301

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
           + D++  NA+VD+Y K   ID ++ VF+++  +DVVSW ++I+ Y+ NGLANEA+ ++  
Sbjct: 302 VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYND 361

Query: 453 M-NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           M N   ++    T VS L A S L  L++G  ++   I+ G NL+  V + L+D+YA+CG
Sbjct: 362 MHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCG 421

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            L  A  +F  +  +    W ++I   G+HG G  A+ LF +M+ E   PDH+TF++LL 
Sbjct: 422 KLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLA 481

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           ACSH+GL+++G+ F ++M+  Y + P  +HY C+VD+LGRA  L+EA++F++SM I+P +
Sbjct: 482 ACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDS 541

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
            VW ALLGACR+H N E+G++ ++ L ELDP N G YVL+SN++A   KW  V+ VR  +
Sbjct: 542 AVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLV 601

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIA--RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
           R   L+KTPG S +E+   +  F +  + + H + +EI + L ++  K+ +  GYV    
Sbjct: 602 RRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKM-KSAGYVPDYS 660

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
           FVL +VEE+EK Q+L  HSERLAIA+G++ +  G+ + I KNLRVC DCHS  K +S++ 
Sbjct: 661 FVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKIT 720

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
            RE++VRDANRFHHF+ G CSCGD+W
Sbjct: 721 EREIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 259/519 (49%), Gaps = 29/519 (5%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQL 115
           D+FTFP +++A          A++H   L+ G    + F   SLV  Y +     +A ++
Sbjct: 68  DSFTFPPLVRAA---PGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRV 124

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M E+ DV  WN+++S    + +  +A+ L   M   G+  +A T  + L  C     
Sbjct: 125 FDEMPER-DVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD 183

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             L + +H   VK G + +++V NALI +Y + G +TEA  V   +  +D V+WNS+++ 
Sbjct: 184 RALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISA 243

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VS 294
             Q      A++ F  +  +G  PD +  V+  SA  + G+ L  K +H Y  ++G+ V 
Sbjct: 244 NEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVG 303

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D+  GN ++DMYAK   ++   +VF  +  +D +SW T+I GY QN    +A+ ++  + 
Sbjct: 304 DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMH 363

Query: 355 -LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
             EGL        SVL A S L  + Q   +H   I+ GL+ D+ +   ++D+Y KCG +
Sbjct: 364 NHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKL 423

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             +  +FE +  +    W ++I+    +G   +AL LF  M +  ++ D +T VS L+A 
Sbjct: 424 VEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAAC 483

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSV---------ASSLVDMYARCGALDIANKVFNCV 523
           S   ++ +G+          F+L  +V          + +VDM  R G LD A +    +
Sbjct: 484 SHAGLVDQGRSF--------FDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSM 535

Query: 524 QTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAES 558
             K D  +W +++ A  +HG    GKVA    ++++ E+
Sbjct: 536 PIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPEN 574



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 213/442 (48%), Gaps = 10/442 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G V +A ++FD++ +R V  WNAML     N      +    RM   G++ DA T 
Sbjct: 112 YLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTL 171

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+  C +L D      +H   +K G     F+ N+L+ +Y K     +A  +F  M  
Sbjct: 172 SSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMAL 231

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D+V WNSIISA    G+   A+ LF  M   G+  +  T V+   A      E     
Sbjct: 232 R-DLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKS 290

Query: 182 IHAATVKSGQNL-QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +H    + G ++  +   NA++ MYA+  K+  A  V   L ++D VSWN+++TG++QN 
Sbjct: 291 VHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNG 350

Query: 241 LYCKAMQFFRELQG-AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           L  +A++ + ++    G KP Q   V+ + A   LG L  G  +HA +IK G   D+ + 
Sbjct: 351 LANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVT 410

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+D+YAKC  +     +F  M  +    W  IIAG   +    KAL LF  +Q E + 
Sbjct: 411 TCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIK 470

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL----NAIVDVYGKCGNIDYS 415
            D +   S+L ACS    + Q +    + + + +  +V +      +VD+ G+ G +D +
Sbjct: 471 PDHVTFVSLLAACSHAGLVDQGRSF--FDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEA 528

Query: 416 RNVFESIESK-DVVSWTSMISS 436
               +S+  K D   W +++ +
Sbjct: 529 FEFIQSMPIKPDSAVWGALLGA 550



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 166/336 (49%), Gaps = 13/336 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGK G + +A  +F  ++ R + TWN+++ A    G+    +E +  M   G+  D  T
Sbjct: 212 VYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLT 271

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDR 118
              +  A A   D + GAK +H  V + G+D  D I  N++V MYAK      A+++FD 
Sbjct: 272 LVSLASAVAQCGD-ELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDN 330

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFET 177
           + ++ DVV WN++I+ Y  +G   EA+ ++ +M    GL     TFV+ L A        
Sbjct: 331 LPDR-DVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQ 389

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            GM +HA ++K+G NL VYV   LI +YA+CGK+ EA  +   +  + +  WN+++ G  
Sbjct: 390 QGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLG 449

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            +    KA+  F ++Q    KPD V  V+ ++A    G +  G+    + + Q     + 
Sbjct: 450 VHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSF--FDLMQTVYGIVP 507

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           I           C V+ +GR      A +FI    I
Sbjct: 508 IAKHY------TCMVDMLGRAGQLDEAFEFIQSMPI 537



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +++A  LF+ + +R+   WNA++     +G   + L  +S+M+   I  D  T
Sbjct: 416 LYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVT 475

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC+    +D G     L+    G          +V M  +     +A +    M
Sbjct: 476 FVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSM 535

Query: 120 GEKEDVVLWNSIISA 134
             K D  +W +++ A
Sbjct: 536 PIKPDSAVWGALLGA 550


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 292/854 (34%), Positives = 485/854 (56%), Gaps = 24/854 (2%)

Query: 1    MYGKC--GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM----RVLGI 54
            MYG C  G  L A+Q+FD    R + TWNA++  Y   G  +     +  M      + +
Sbjct: 206  MYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIEL 265

Query: 55   SVDAFTFPCVIKACAMLKDLDCGA--KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
              +  TF  +I A + L     G   ++   VLK G  S  ++ ++LV+ +A+     +A
Sbjct: 266  RPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEA 324

Query: 113  RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
            + +F  + E+  V L N +I          EA+G+F    R   V N  TFV  L A  +
Sbjct: 325  KDIFINLKERNAVTL-NGLIVGLVKQHCSEEAVGIFMG-TRDSFVVNTDTFVVLLSAVAE 382

Query: 173  SSFETLGM----EIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
             S    G+    E+H   +++G  +L++ ++N L+ MYA+CG + +A+ V   L  +D V
Sbjct: 383  FSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRV 442

Query: 228  SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
            SWN++++   QN     AM  +  ++     P     ++ +S+   L  L  G+++H  A
Sbjct: 443  SWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDA 502

Query: 288  IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL-KA 346
            +K G   D  + N L+ MY  C   +    +F  M   D +SW +I+     ++    ++
Sbjct: 503  VKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAES 562

Query: 347  LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDV 405
            +E+F  +   GL  + +   ++L A S L  +   K++H  +++ G + D  + NA++  
Sbjct: 563  VEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSC 622

Query: 406  YGKCGNIDYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
            Y K G++D    +F S+  + D VSW SMIS Y++NG   E ++  +LM  +N   D  T
Sbjct: 623  YAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCT 682

Query: 465  LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
                L+A +S++ L++G E++ F IR     +  V S+L+DMY++CG +D A+KVFN + 
Sbjct: 683  FSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMS 742

Query: 525  TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
             K+   W SMI+    HG G+ A+++F +M+     PDH+TF+++L ACSH+GL++ G  
Sbjct: 743  QKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLD 802

Query: 585  FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
            + E+M  D+ + P  EHY+C++DLLGRA  L +  +++  M ++P   +W  +L ACR  
Sbjct: 803  YFEMME-DHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQS 861

Query: 645  SNK---ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
             +    +LG+  ++ LLEL+P NP NYVL SN +AA+ +W+D  + R  M G+ +KK  G
Sbjct: 862  KDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAG 921

Query: 702  SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
             SW+ +G+ +H+FIA D+SH  + EIY+KL  + +K+ +  GYV  T+F L+++EEE K 
Sbjct: 922  QSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKI-KNAGYVPMTEFALYDLEEENKE 980

Query: 762  QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
            ++L  HSE+LA+A+ + +S+    IRI KNLRVC DCH+  + +S++  R++++RD+ RF
Sbjct: 981  ELLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRF 1040

Query: 822  HHFEAGVCSCGDYW 835
            HHFE G CSCGDYW
Sbjct: 1041 HHFEDGKCSCGDYW 1054



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 177/649 (27%), Positives = 325/649 (50%), Gaps = 31/649 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD--- 57
           +Y K   +  A Q+FD + +R   +W  ++  YV +G        +  M   G       
Sbjct: 100 LYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPT 159

Query: 58  AFTFPCVIKAC--AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD--FRKAR 113
            FTF  V++AC  A    L    ++HGLV K  Y S   + N+L++MY  C      +A+
Sbjct: 160 PFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQ 219

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM----QRVGLVTNAYTFVAALQA 169
           Q+FD    + D++ WN+++S Y+  G  +    LF  M      + L  N +TF + + A
Sbjct: 220 QVFDTTPVR-DLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITA 278

Query: 170 CEDSSFETLGM-EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
              SS  +  + ++ A  +KSG +  +YV +AL++ +AR G + EA  +   L+ +++V+
Sbjct: 279 TSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVT 338

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAG--QKPDQVCTVNAVSA-SGRLGNLLNGKELHA 285
            N ++ G V+     +A+  F   + +        V  ++AV+  S     L+ G+E+H 
Sbjct: 339 LNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHG 398

Query: 286 YAIKQGFVSDLQIG--NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           + ++ G + DL+I   N L++MYAKC  ++   RVF  + A+D +SW TII+   QN   
Sbjct: 399 HILRTGLI-DLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFC 457

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAI 402
             A+  +  ++   +        S L +C+ L+ ++  +++H   ++ GL  D  + NA+
Sbjct: 458 EGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNAL 517

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTS----MISSYVHNGLANEALELFYLMNEANV 458
           V +YG CG    S  +F S+   D+VSW S    M+SS+       E++E+F  M  + +
Sbjct: 518 VKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTA---ESVEVFSNMMRSGL 574

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
             + +T V+ LSA S LS+L+ GK+++  +++ G   + +V ++L+  YA+ G +D   +
Sbjct: 575 TPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQ 634

Query: 519 VFNCVQ-TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           +F+ +   +D + W SMI+    +G  +  +D  + M   +   D  TF  +L AC+   
Sbjct: 635 LFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVA 694

Query: 578 LINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
            +  G +     +R   + D   E  + L+D+  +   ++ A +   SM
Sbjct: 695 ALERGMEMHAFGIRSQLESDVVVE--SALLDMYSKCGRIDYASKVFNSM 741



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 265/525 (50%), Gaps = 21/525 (4%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H  ++K G     F+ N LV +YAK      ARQ+FD M E+ + V W  ++S Y  S
Sbjct: 77  RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLER-NAVSWTCLVSGYVLS 135

Query: 139 GQCLEALGLFREMQRVG---LVTNAYTFVAALQACEDSSFETL--GMEIHAATVKSGQNL 193
           G   EA  +F+ M   G        +TF + L+AC+D+  + L   +++H    K+    
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYAS 195

Query: 194 QVYVANALIAMYARC--GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
              V NALI+MY  C  G   +A  V      +D ++WN++++ + +          F  
Sbjct: 196 NTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMA 255

Query: 252 L----QGAGQKPDQVCTVNAVSASGRLGNLLNG--KELHAYAIKQGFVSDLQIGNTLMDM 305
           +         +P++    + ++A+  L +  +G   ++ A  +K G  SDL +G+ L+  
Sbjct: 256 MLHDDSAIELRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSA 314

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF---RTVQLEGLDADV 362
           +A+   ++    +F  +  ++ ++   +I G  + +C  +A+ +F   R   +   D  V
Sbjct: 315 FARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFV 374

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL--NAIVDVYGKCGNIDYSRNVFE 420
           +++ +V         + + +E+HG+I+R GL DL I   N +V++Y KCG ID +  VF 
Sbjct: 375 VLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFR 434

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            + ++D VSW ++IS    NG    A+  + +M +  +   +   +S LS+ +SL +L  
Sbjct: 435 LLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTA 494

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN-G 539
           G++++   ++ G +L+ SV+++LV MY  CGA   + ++FN +   D++ W S++     
Sbjct: 495 GQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVS 554

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            H     ++++F  M      P+ +TF+ LL A S   ++  GK+
Sbjct: 555 SHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQ 599



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 254/528 (48%), Gaps = 32/528 (6%)

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
           E+++ E L +E+    VK G    ++++N L+ +YA+  ++  A  V   +  +++VSW 
Sbjct: 71  EEAAPERLHLEL----VKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWT 126

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAG---QKPDQVCTVNAVSASGRLGN--LLNGKELHA 285
            +++G+V + +  +A + F+ +   G    +P      + + A    G   L    ++H 
Sbjct: 127 CLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHG 186

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYM--GRVFYQMTAQDFISWTTIIAGYAQNNCH 343
              K  + S+  + N L+ MY  C     +   +VF     +D I+W  +++ YA+    
Sbjct: 187 LVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYV 246

Query: 344 LKALELFRTVQLEG----LDADVMIIGSVLMACSGLKCMSQT-KEIHGYIIRKG-LSDLV 397
           +    LF  +  +     L  +    GS++ A S   C S    ++   +++ G  SDL 
Sbjct: 247 VSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLY 306

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           + +A+V  + + G +D ++++F +++ ++ V+   +I   V    + EA+ +F    ++ 
Sbjct: 307 VGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSF 366

Query: 458 VESDSITLVSALSAASSLSI----LKKGKELNGFIIRKGF-NLEGSVASSLVDMYARCGA 512
           V  ++ T V  LSA +  SI    L +G+E++G I+R G  +L+ ++++ LV+MYA+CGA
Sbjct: 367 V-VNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGA 425

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +D A++VF  +  +D + W ++I+    +G  + A+  +  M     +P +   ++ L +
Sbjct: 426 IDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSS 485

Query: 573 CSHSGLINEGKKFLEIMRCD---YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           C+   L+  G++    + CD   + LD        LV + G      E+++   SM  E 
Sbjct: 486 CASLRLLTAGQQ----VHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMA-EH 540

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
               W +++G   V S+    E V      +  G   N V   N+ +A
Sbjct: 541 DIVSWNSIMGV-MVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSA 587



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 157/323 (48%), Gaps = 14/323 (4%)

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           R G     + LH   +K+G   DL + N L+++YAK   +    +VF  M  ++ +SWT 
Sbjct: 68  RRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTC 127

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLD---ADVMIIGSVLMAC--SGLKCMSQTKEIHGY 387
           +++GY  +    +A  +F+ +  EG +         GSVL AC  +G   ++   ++HG 
Sbjct: 128 LVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGL 187

Query: 388 IIRK-GLSDLVILNAIVDVYGKC--GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           + +    S+  + NA++ +YG C  G    ++ VF++   +D+++W +++S Y   G   
Sbjct: 188 VSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVV 247

Query: 445 EALELFYLM--NEANVE-SDSITLVSALSAASSLSILKKG--KELNGFIIRKGFNLEGSV 499
               LF  M  +++ +E   +     +L  A+SLS    G   ++   +++ G + +  V
Sbjct: 248 STFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYV 307

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            S+LV  +AR G LD A  +F  ++ ++ +    +I         + A+ +F     +SF
Sbjct: 308 GSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTR-DSF 366

Query: 560 APDHITFLALLYACSHSGLINEG 582
             +  TF+ LL A +   +  +G
Sbjct: 367 VVNTDTFVVLLSAVAEFSIPEDG 389


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/634 (41%), Positives = 397/634 (62%), Gaps = 22/634 (3%)

Query: 218  LYQLENKDSV-SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ---VCTVNAVSASGR 273
             Y+  +K +V SWNS++    +     +A++ F  L+  G  P +    CT+ + SA   
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA--- 1154

Query: 274  LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
            L +L++G+  H  A   GF +DL + + L+DMY+KC  +     +F ++  ++ +SWT++
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 1214

Query: 334  IAGYAQNNCHLKALELFRTVQLE----------GLDADVMIIGSVLMACSGLKCMSQTKE 383
            I GY QN     AL LF+    E           LD+ VM+  SVL ACS +     T+ 
Sbjct: 1215 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMV--SVLSACSRVSGKGITEG 1272

Query: 384  IHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
            +HG++++KG    + + N ++D Y KCG    S+ VF+ +E KD +SW SMI+ Y  +GL
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332

Query: 443  ANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
            + EALE+F+ ++    V  +++TL + L A +    L+ GK ++  +I+        V +
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 1392

Query: 502  SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
            S++DMY +CG +++A K F+ ++ K++  WT+M+   G+HGR K A+D+FYKM      P
Sbjct: 1393 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 1452

Query: 562  DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
            ++ITF+++L ACSH+GL+ EG  +   M+  Y ++P  EHY C+VDL GRA  L EAY  
Sbjct: 1453 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNL 1512

Query: 622  VRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKW 681
            ++ M+++P   VW +LLGACR+H N +LGEI A+KL ELDP N G YVL+SN++A + +W
Sbjct: 1513 IKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRW 1572

Query: 682  KDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLERE 741
             DVE++RM M+   L K PG S +E+  ++H F+  DK H   + IYK L ++T +L++ 
Sbjct: 1573 ADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKI 1632

Query: 742  GGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSF 801
             GYV     VLH+V+EEEK  +L  HSE+LA+A+GV+ S  G+ I I KNLRVC DCH+ 
Sbjct: 1633 -GYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTV 1691

Query: 802  CKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             KL+S+L  R+ VVRD+ RFHHF+ GVCSCGDYW
Sbjct: 1692 IKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 286/544 (52%), Gaps = 44/544 (8%)

Query: 116  FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            F +  +K +V  WNS+I+  +  G  +EAL  F  ++++GL+    +F   +++C     
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 1157

Query: 176  ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
               G   H      G    ++V++ALI MY++CG++ +A  +  ++  ++ VSW SM+TG
Sbjct: 1158 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 1217

Query: 236  FVQNDLYCKAMQFFR-------ELQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYA 287
            +VQN+    A+  F+       E++     P D V  V+ +SA  R+      + +H + 
Sbjct: 1218 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 1277

Query: 288  IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
            +K+GF   + +GNTLMD YAKC       +VF  M  +D ISW ++IA YAQ+    +AL
Sbjct: 1278 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 1337

Query: 348  ELFR-TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDV 405
            E+F   V+  G+  + + + +VL+AC+    +   K IH  +I+  L  ++ +  +I+D+
Sbjct: 1338 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDM 1397

Query: 406  YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
            Y KCG ++ ++  F+ ++ K+V SWT+M++ Y  +G A EAL++FY M  A V+ + IT 
Sbjct: 1398 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 1457

Query: 466  VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCV 523
            VS L+A S   ++++G      +  K +++E  +     +VD++ R G L+ A  +   +
Sbjct: 1458 VSVLAACSHAGLVEEGWHWFNAMKHK-YDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRM 1516

Query: 524  QTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
            + K D ++W S++ A  +H     G++A    ++++     PD+  +  LL     S L 
Sbjct: 1517 KMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELD-----PDNCGYYVLL-----SNLY 1566

Query: 580  NEGKKFLEIMRC-----DYQLDPWPEHYACLVDLLGRAN----------HLEEAYQFVRS 624
             +  ++ ++ R      + QL   P     LV+L GR +          H E  Y+++  
Sbjct: 1567 ADAGRWADVERMRMLMKNRQLVKPPGF--SLVELKGRVHVFLVGDKEHPHHEMIYKYLEK 1624

Query: 625  MQIE 628
            + +E
Sbjct: 1625 LTLE 1628



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 197/377 (52%), Gaps = 32/377 (8%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           N  + +++HA  I+ G  +D  +   L+ +Y+    + Y   +FYQ+      +W  II 
Sbjct: 39  NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
               N    +AL L++ +  +G+ AD      V+ AC+    +   K +HG +I+ G S 
Sbjct: 99  ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158

Query: 395 DLVILNAIVDVYGKCGNIDY-------------------------------SRNVFESIE 423
           D+ + N ++D Y KCG+  +                               +R +F+ I 
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
           SK+VVSWT+MI+ Y+ N    EALELF  M   N+  +  T+VS + A + + IL  G+ 
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++ + I+    +   + ++L+DMY++CG++  A +VF  +  K L  W SMI + G+HG 
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
           G+ A++LF +ME  +  PD ITF+ +L AC H   + EG  +   M   Y + P PEHY 
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYE 398

Query: 604 CLVDLLGRANHLEEAYQ 620
           C+ +L  R+N+L+EA++
Sbjct: 399 CMTELYARSNNLDEAFK 415



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 219/443 (49%), Gaps = 23/443 (5%)

Query: 11   AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
            A   +  V +  V +WN+++      G+ +  L  +S +R LG+     +FPC IK+C+ 
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154

Query: 71   LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
            L DL  G   H      G+++  F+ ++L+ MY+KC   + AR LFD +  + +VV W S
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTS 1213

Query: 131  IISAYSASGQCLEALGLFREMQRV--------GLVTNAYTFVAALQACEDSSFETLGMEI 182
            +I+ Y  + Q   AL LF++             +  ++   V+ L AC   S + +   +
Sbjct: 1214 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGV 1273

Query: 183  HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
            H   VK G +  + V N L+  YA+CG+   +  V   +E KD +SWNSM+  + Q+ L 
Sbjct: 1274 HGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLS 1333

Query: 243  CKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ F  + +  G + + V     + A    G L  GK +H   IK     ++ +G +
Sbjct: 1334 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 1393

Query: 302  LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
            ++DMY KC  V    + F +M  ++  SWT ++AGY  +    +AL++F  +   G+  +
Sbjct: 1394 IIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN 1453

Query: 362  VMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
             +   SVL ACS       G    +  K  H Y I  G+        +VD++G+ G ++ 
Sbjct: 1454 YITFVSVLAACSHAGLVEEGWHWFNAMK--HKYDIEPGIEH---YGCMVDLFGRAGCLNE 1508

Query: 415  SRNVFESIESK-DVVSWTSMISS 436
            + N+ + ++ K D V W S++ +
Sbjct: 1509 AYNLIKRMKMKPDFVVWGSLLGA 1531



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 150/311 (48%), Gaps = 32/311 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   G +  A  LF ++     FTWN ++ A   NG   + L  Y  M   GI+ D FT
Sbjct: 68  LYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFT 127

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY------------- 107
           FP VIKAC     +D G  +HG ++K G+    F+ N+L+  Y KC              
Sbjct: 128 FPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMR 187

Query: 108 ------------------DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                             D ++AR++FD +  K +VV W ++I+ Y  + Q  EAL LF+
Sbjct: 188 VRNVVSWTTVISGLISCGDLQEARRIFDEIPSK-NVVSWTAMINGYIRNQQPEEALELFK 246

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
            MQ   +  N YT V+ ++AC +    TLG  IH   +K+   + VY+  ALI MY++CG
Sbjct: 247 RMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCG 306

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + +A  V   +  K   +WNSM+T    + L  +A+  F E++    KPD +  +  + 
Sbjct: 307 SIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLC 366

Query: 270 ASGRLGNLLNG 280
           A   + N+  G
Sbjct: 367 ACVHIKNVKEG 377



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 173/351 (49%), Gaps = 20/351 (5%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-------- 52
            MY KCG + DA  LFD++  R V +W +M+  YV N +    L  +              
Sbjct: 1186 MYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGN 1245

Query: 53   GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
             + +D+     V+ AC+ +        +HG V+K G+D +  + N+L+  YAKC     +
Sbjct: 1246 NVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVS 1305

Query: 113  RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQACE 171
            +++FD M EK+D+  WNS+I+ Y+ SG   EAL +F  M R VG+  NA T  A L AC 
Sbjct: 1306 KKVFDWMEEKDDIS-WNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACA 1364

Query: 172  DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
             +     G  IH   +K      V V  ++I MY +CG++  A     +++ K+  SW +
Sbjct: 1365 HAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTA 1424

Query: 232  MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-----HAY 286
            M+ G+  +    +A+  F ++  AG KP+ +  V+ ++A    G +  G        H Y
Sbjct: 1425 MVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKY 1484

Query: 287  AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG 336
             I+ G    ++    ++D++ +  C+N    +  +M  + DF+ W +++  
Sbjct: 1485 DIEPG----IEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 1531



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 171/386 (44%), Gaps = 43/386 (11%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++ C   K L    +IH  +++ G  +   +   L+ +Y+       A  LF ++ +  
Sbjct: 33  LLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQI-QNP 88

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
               WN II A + +G   +AL L++ M   G+  + +TF   ++AC +     LG  +H
Sbjct: 89  CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148

Query: 184 AATVKSGQNLQVYVANALIAMYARCGK-------------------------------MT 212
            + +K G +  V+V N LI  Y +CG                                + 
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
           EA  +  ++ +K+ VSW +M+ G+++N    +A++ F+ +Q     P++   V+ + A  
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
            +G L  G+ +H YAIK      + +G  L+DMY+KC  +     VF  M  +   +W +
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK- 391
           +I     +    +AL LF  ++   +  D +    VL AC  +K     KE   Y  R  
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIK---NVKEGCAYFTRMT 385

Query: 392 ---GLSDLV-ILNAIVDVYGKCGNID 413
              G++ +      + ++Y +  N+D
Sbjct: 386 QHYGIAPIPEHYECMTELYARSNNLD 411



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 149/313 (47%), Gaps = 45/313 (14%)

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L  C   K + Q   IH  IIR GLS D ++   ++ +Y   G I Y+  +F  I++  
Sbjct: 33  LLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
             +W  +I +   NGL+ +AL L+  M    + +D  T    + A ++   +  GK ++G
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 487 FIIRKGFNLEGSVASSLVDMYARCG----ALDI--------------------------- 515
            +I+ GF+ +  V ++L+D Y +CG    AL +                           
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A ++F+ + +K+++ WT+MIN    + + + A++LF +M+AE+  P+  T ++L+ AC+ 
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPE----HYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
            G++  G+        DY +    E        L+D+  +   +++A +   +M    + 
Sbjct: 270 MGILTLGRGIH-----DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSL 323

Query: 632 EVWCALLGACRVH 644
             W +++ +  VH
Sbjct: 324 PTWNSMITSLGVH 336


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 273/748 (36%), Positives = 424/748 (56%), Gaps = 11/748 (1%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           ++ +SLV MY +C     A  +F ++  K  +VLW  +ISAY + G    A+ LF  + +
Sbjct: 63  YLASSLVYMYLRCGSLESAIDVFHKIAHKS-IVLWTVLISAYVSRGHSAAAIALFHRILQ 121

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G+  +A  FV+ L AC    F   G  IH   V++G  LQ  VA+AL++MY RCG + +
Sbjct: 122 EGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRD 181

Query: 214 AAGVLYQLENK-DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
           A  +   LE   D V WN+M+T   QN    +A++ F  +   G  PD V  V+   A  
Sbjct: 182 ANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACS 241

Query: 273 RLGNLLNG--KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
              +L     K  HA   + G  SD+ +   L++ YA+C  ++   + F +M  ++ +SW
Sbjct: 242 SSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSW 301

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
           T++IA + Q   HL A+E F  + LEG+      + + L  C  L+     + I   I  
Sbjct: 302 TSMIAAFTQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVEAIAQEI-- 358

Query: 391 KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK--DVVSWTSMISSYVHNGLANEALE 448
             ++D+ I+  +V  Y +C   + +  VF + E    D    T+MI+ Y          +
Sbjct: 359 GVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFK 418

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMY 507
           L+    E  +  D I  ++AL A +SL+ L +G++++  +   +  + + ++ +++V MY
Sbjct: 419 LWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMY 478

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
            +CG+L  A   F+ +  +D I W +M++A+  HGR +   DLF  M  E F  + I FL
Sbjct: 479 GQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFL 538

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
            LL AC+H+GL+  G +    M  D+ + P  EHY C+VDLLGR   L +A+  V++M +
Sbjct: 539 NLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPV 598

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
            P A  W AL+GACR++ + E G   A+++LEL   +   YV + N+++A+ +W D   V
Sbjct: 599 PPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAV 658

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           R  M   GL+K PG S IEI +K+H F+ RD+SH +S+ IY +L  +   +ER  GY A 
Sbjct: 659 RKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIER-AGYRAV 717

Query: 748 TQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSR 807
           T  VLH+VEEE+K Q+L  HSE+LAIA+G++ + +GS +R+ KNLRVCVDCH+  K +S+
Sbjct: 718 TGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISK 777

Query: 808 LFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +FGRE+VVRD  RFHHF+ G CSCGDYW
Sbjct: 778 VFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 171/613 (27%), Positives = 303/613 (49%), Gaps = 26/613 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGS+  A  +F K++ +++  W  ++ AYVS G     +  + R+   GI++DA  
Sbjct: 71  MYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIV 130

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC+  + L  G  IH   ++ G    + + ++LV+MY +C   R A  LF  + 
Sbjct: 131 FVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLE 190

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS-SFETLG 179
              DVVLWN++I+A S +G   EAL +F  M ++G+  +  TFV+  +AC  S S     
Sbjct: 191 RHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQ 250

Query: 180 ME-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           ++  HA   ++G    V VA AL+  YARCG++  A     ++  +++VSW SM+  F Q
Sbjct: 251 VKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQ 310

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
              +  A++ F  +   G  P +     A+       +L   + + A A + G V+D+ I
Sbjct: 311 IG-HLLAVETFHAMLLEGVVPTRSTLFAALEGC---EDLRVARLVEAIAQEIGVVTDVAI 366

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW-----TTIIAGYAQNNCHLKALELFRTV 353
              L+  YA+C       RVF   +A++   W     T +IA YAQ        +L+   
Sbjct: 367 VTDLVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAA 423

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKCGN 411
              G+  D ++  + L AC+ L  +S+ ++IH  +   R+   D+ + NAIV +YG+CG+
Sbjct: 424 IERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGS 483

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           +  +R+ F+ + ++D +SW +M+S+   +G   +  +LF  M +   +++ I  ++ LSA
Sbjct: 484 LRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSA 543

Query: 472 ASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLI 529
            +   ++K G E  +      G          +VD+  R G L  A+ +   +    D  
Sbjct: 544 CAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAA 603

Query: 530 LWTSMINANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
            W +++ A  ++G   RG+ A +   ++ A+  A     ++AL    S +G  ++     
Sbjct: 604 TWMALMGACRIYGDTERGRFAAERVLELRADHTA----AYVALCNIYSAAGRWDDAAAVR 659

Query: 587 EIMRCDYQLDPWP 599
           +IM  D  L   P
Sbjct: 660 KIM-ADLGLRKIP 671



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 157/304 (51%), Gaps = 8/304 (2%)

Query: 276 NLLNGKELHAYAIKQGFVS-DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           ++  GK LH+       +S D  + ++L+ MY +C  +     VF+++  +  + WT +I
Sbjct: 41  SIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLI 100

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           + Y        A+ LF  +  EG+  D ++  SVL ACS  + ++  + IH   +  GL 
Sbjct: 101 SAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLG 160

Query: 395 -DLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYL 452
              ++ +A+V +YG+CG++  +  +F  +E   DVV W +MI++   NG   EALE+FY 
Sbjct: 161 LQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYR 220

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGF---IIRKGFNLEGSVASSLVDMYAR 509
           M +  +  D +T VS   A SS   L +  ++ GF   +   G   +  VA++LV+ YAR
Sbjct: 221 MLQLGIPPDLVTFVSVFKACSSSPSL-RASQVKGFHACLDETGLGSDVVVATALVNAYAR 279

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CG +D A K F  +  ++ + WTSMI A    G   +A++ F+ M  E   P   T  A 
Sbjct: 280 CGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGH-LLAVETFHAMLLEGVVPTRSTLFAA 338

Query: 570 LYAC 573
           L  C
Sbjct: 339 LEGC 342



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 111/183 (60%), Gaps = 1/183 (0%)

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           D  + +++V +Y +CG+++ + +VF  I  K +V WT +IS+YV  G +  A+ LF+ + 
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
           +  +  D+I  VS LSA SS   L  G+ ++   +  G  L+  VAS+LV MY RCG+L 
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180

Query: 515 IANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
            AN +F  ++   D++LW +MI AN  +G  + A+++FY+M      PD +TF+++  AC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240

Query: 574 SHS 576
           S S
Sbjct: 241 SSS 243


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 249/659 (37%), Positives = 402/659 (61%), Gaps = 3/659 (0%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++HA  + +G     ++ N L+ MY++CG++  A  +   +  ++ VSW +M++G  Q
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N  + +A++ F  ++  G+ P Q    +A+ A   LG++  GK++H  A+K G  S+L +
Sbjct: 84  NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G+ L DMY+KC  +    +VF +M  +D +SWT +I GY++     +AL  F+ +  E +
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D  ++ S L AC  LK     + +H  +++ G  SD+ + NA+ D+Y K G+++ + N
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 263

Query: 418 VFE-SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           VF    E ++VVS+T +I  YV      + L +F  +    +E +  T  S + A ++ +
Sbjct: 264 VFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA 323

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L++G +L+  +++  F+ +  V+S LVDMY +CG L+ A + F+ +     I W S+++
Sbjct: 324 ALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVS 383

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
             G HG GK AI  F +M      P+ ITF++LL  CSH+GL+ EG  +   M   Y + 
Sbjct: 384 VFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVV 443

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHY+C++DLLGRA  L+EA +F+  M  EP A  WC+ LGACR+H +KE+G++ A+K
Sbjct: 444 PGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEK 503

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L++L+P N G  VL+SN++A  R+W+DV  VRMRMR   +KK PG SW+++G K H F A
Sbjct: 504 LVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGA 563

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D SH     IY+KL  + +++ +  GYV  T  V  ++++  K ++L+ HSER+A+A+ 
Sbjct: 564 EDWSHXRKSAIYEKLDXLLDQI-KAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFA 622

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++    G  I + KNLRVCVDCHS  K +S++ GR+++VRD +RFHHF  G CSCGDYW
Sbjct: 623 LISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 267/516 (51%), Gaps = 10/516 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           VI+  A  K L  G ++H L++  GY    F+ N LV MY+KC +   A +LFD M ++ 
Sbjct: 11  VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQR- 69

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           ++V W ++IS  S + +  EA+  F  M+  G V   + F +A++AC       +G ++H
Sbjct: 70  NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 129

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              +K G   +++V + L  MY++CG M +A  V  ++  KD VSW +M+ G+ +   + 
Sbjct: 130 CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE 189

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+  F+++       DQ    + + A G L     G+ +H+  +K GF SD+ +GN L 
Sbjct: 190 EALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT 249

Query: 304 DMYAKCCCVNYMGRVF-YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           DMY+K   +     VF      ++ +S+T +I GY +     K L +F  ++ +G++ + 
Sbjct: 250 DMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNE 309

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFES 421
               S++ AC+    + Q  ++H  +++     D  + + +VD+YGKCG ++++   F+ 
Sbjct: 310 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDE 369

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           I     ++W S++S +  +GL  +A++ F  M +  V+ ++IT +S L+  S   ++++G
Sbjct: 370 IGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429

Query: 482 KELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANG 539
            +    + +    + G    S ++D+  R G L  A +  N +    +   W S + A  
Sbjct: 430 LDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACR 489

Query: 540 LHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +HG    GK+A +   K+E ++     +  L+ +YA
Sbjct: 490 IHGDKEMGKLAAEKLVKLEPKNSGA--LVLLSNIYA 523



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 213/451 (47%), Gaps = 27/451 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A +LFD + QR + +W AM+     N +    + T+  MR+ G     F 
Sbjct: 49  MYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFA 108

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   I+ACA L  ++ G ++H L LK G  S  F+ ++L  MY+KC     A ++F+ M 
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K++V  W ++I  YS  G+  EAL  F++M    +  + +   + L AC        G 
Sbjct: 169 CKDEVS-WTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGR 227

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL-YQLENKDSVSWNSMLTGFVQN 239
            +H++ VK G    ++V NAL  MY++ G M  A+ V     E ++ VS+  ++ G+V+ 
Sbjct: 228 SVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVET 287

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +   K +  F EL+  G +P++    + + A      L  G +LHA  +K  F  D  + 
Sbjct: 288 EQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 347

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           + L+DMY KC  + +  + F ++     I+W ++++ + Q+     A++ F  +   G+ 
Sbjct: 348 SILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVK 407

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------------IVDVY 406
            + +   S+L  CS           H  ++ +GL     ++              ++D+ 
Sbjct: 408 PNAITFISLLTGCS-----------HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLL 456

Query: 407 GKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
           G+ G +  ++     +    +   W S + +
Sbjct: 457 GRAGRLKEAKEFINRMPFEPNAFGWCSFLGA 487



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 200/388 (51%), Gaps = 6/388 (1%)

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D     + +    +   L  GK+LHA  I  G+     + N L++MY+KC  +++  ++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
             M  ++ +SWT +I+G +QN+   +A+  F  +++ G         S + AC+ L  + 
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             K++H   ++ G+ S+L + + + D+Y KCG +  +  VFE +  KD VSWT+MI  Y 
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
             G   EAL  F  M +  V  D   L S L A  +L   K G+ ++  +++ GF  +  
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243

Query: 499 VASSLVDMYARCGALDIANKVFNC-VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
           V ++L DMY++ G ++ A+ VF    + ++++ +T +I+      + +  + +F ++  +
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
              P+  TF +L+ AC++   + +G +   ++M+ ++  DP+    + LVD+ G+   LE
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLE 361

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVH 644
            A Q    +  +PT   W +L+     H
Sbjct: 362 HAIQAFDEIG-DPTEIAWNSLVSVFGQH 388


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 258/644 (40%), Positives = 399/644 (61%), Gaps = 32/644 (4%)

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           ++ + SW   L    +++ + +A+  + E+  +G +PD       + A   L +L  G++
Sbjct: 54  SRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQ 113

Query: 283 LHAYAIKQGF-VSDLQIGNTLMDMYAKCCCVN--------------YMGRV------FYQ 321
           +HA A+K G+  S + + NTL++MY KC  +                +GRV      F  
Sbjct: 114 IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFES 173

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
              +D +SW T+I+ ++Q++   +AL  FR + LEG++ D + I SVL ACS L+ +   
Sbjct: 174 FVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVG 233

Query: 382 KEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
           KEIH Y++R    + +  + +A+VD+Y  C  ++  R VF+ I  + +  W +MIS Y  
Sbjct: 234 KEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYAR 293

Query: 440 NGLANEALELFY-LMNEANVESDSITLVSALSA-ASSLSILKKGKELNGFIIRKGFNLEG 497
           NGL  +AL LF  ++  A +  ++ T+ S + A   SL+ + KGKE++ + IR     + 
Sbjct: 294 NGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDI 353

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
           +V S+LVDMYA+CG L+++ +VFN +  K++I W  +I A G+HG+G+ A++LF  M AE
Sbjct: 354 TVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAE 413

Query: 558 S-----FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           +       P+ +TF+ +  ACSHSGLI+EG      M+ D+ ++P  +HYAC+VDLLGRA
Sbjct: 414 AGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRA 473

Query: 613 NHLEEAYQFVRSMQIE-PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
             LEEAY+ V +M  E      W +LLGACR+H N ELGE+ AK LL L+P    +YVL+
Sbjct: 474 GQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLL 533

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           SN+++++  W    +VR  MR  G+KK PG SWIE  +++H F+A D SH +S++++  L
Sbjct: 534 SNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFL 593

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKN 791
             ++EK+ +EG YV  T  VLHNV+E+EK  +L GHSE+LAIA+G+L +  G+ IR+ KN
Sbjct: 594 ETLSEKMRKEG-YVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKN 652

Query: 792 LRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           LRVC DCH+  K +S++  RE++VRD  RFHHF+ G CSCGDYW
Sbjct: 653 LRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 246/501 (49%), Gaps = 44/501 (8%)

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           W   + + + S    EA+  + EM   G   + + F A L+A         G +IHAA V
Sbjct: 60  WVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAV 119

Query: 188 KSGQ------------NL---------QVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           K G             N+         + +  NAL+AMYA+ G++ ++  +     ++D 
Sbjct: 120 KFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDM 179

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           VSWN+M++ F Q+D + +A+ FFR +   G + D V   + + A   L  L  GKE+HAY
Sbjct: 180 VSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAY 239

Query: 287 AIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
            ++    + +  +G+ L+DMY  C  V    RVF  +  +    W  +I+GYA+N    K
Sbjct: 240 VLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEK 299

Query: 346 ALELF-RTVQLEGLDADVMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGL-SDLVILNAI 402
           AL LF   +++ GL  +   + SV+ AC   L  +++ KEIH Y IR  L SD+ + +A+
Sbjct: 300 ALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSAL 359

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM-----NEAN 457
           VD+Y KCG ++ SR VF  + +K+V++W  +I +   +G   EALELF  M         
Sbjct: 360 VDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGE 419

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRK---GFNLEGSVASSLVDMYARCGALD 514
            + + +T ++  +A S   ++ +G  LN F   K   G        + +VD+  R G L+
Sbjct: 420 AKPNEVTFITVFAACSHSGLISEG--LNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLE 477

Query: 515 IANKVFNCVQTK--DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLAL 569
            A ++ N +  +   +  W+S++ A  +H     G+VA      +E       H   L+ 
Sbjct: 478 EAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPN--VASHYVLLSN 535

Query: 570 LYACSHSGLINEGKKFLEIMR 590
           +Y  S +GL N+  +  + MR
Sbjct: 536 IY--SSAGLWNKAMEVRKNMR 554



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 241/495 (48%), Gaps = 48/495 (9%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
             R+  +W   L +   + +    + TY  M V G   D F FP V+KA + L+DL  G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 79  KIHGLVLKCGYDSTD---------------------FIVNSLVAMYAKCYDFRKARQLFD 117
           +IH   +K GY S+                      F  N+L+AMYAK      ++ LF+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
              ++ D+V WN++IS++S S +  EAL  FR M   G+  +  T  + L AC       
Sbjct: 173 SFVDR-DMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231

Query: 178 LGMEIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +G EIHA  +++   ++  +V +AL+ MY  C ++     V   +  +    WN+M++G+
Sbjct: 232 VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 291

Query: 237 VQNDLYCKAMQFFREL-QGAGQKPDQVCTVNAVSAS-GRLGNLLNGKELHAYAIKQGFVS 294
            +N L  KA+  F E+ + AG  P+     + + A    L  +  GKE+HAYAI+    S
Sbjct: 292 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLAS 351

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D+ +G+ L+DMYAKC C+N   RVF +M  ++ I+W  +I     +    +ALELF+ + 
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMV 411

Query: 355 LE---GLDA---DVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNA 401
            E   G +A   +V  I +V  ACS       GL    + K  HG    +  SD      
Sbjct: 412 AEAGRGGEAKPNEVTFI-TVFAACSHSGLISEGLNLFYRMKHDHGV---EPTSDHYA--C 465

Query: 402 IVDVYGKCGNIDYSRNVFESIESK--DVVSWTSMISS-YVHNGLA-NEALELFYLMNEAN 457
           +VD+ G+ G ++ +  +  ++ ++   V +W+S++ +  +H  +   E      L  E N
Sbjct: 466 VVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPN 525

Query: 458 VESDSITLVSALSAA 472
           V S  + L +  S+A
Sbjct: 526 VASHYVLLSNIYSSA 540



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 167/330 (50%), Gaps = 27/330 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G V D++ LF+    R + +WN M+ ++  +      L  +  M + G+ +D  T
Sbjct: 157 MYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVT 216

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-----LVAMYAKCYDFRKARQL 115
              V+ AC+ L+ LD G +IH  VL+    + D I NS     LV MY  C      R++
Sbjct: 217 IASVLPACSHLERLDVGKEIHAYVLR----NNDLIENSFVGSALVDMYCNCRQVESGRRV 272

Query: 116 FDR-MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDS 173
           FD  +G +  + LWN++IS Y+ +G   +AL LF EM +V GL+ N  T  + + AC  S
Sbjct: 273 FDHILGRR--IELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHS 330

Query: 174 -SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
            +    G EIHA  +++     + V +AL+ MYA+CG +  +  V  ++ NK+ ++WN +
Sbjct: 331 LAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVL 390

Query: 233 LTGFVQNDLYCKAMQFFREL-----QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           +     +    +A++ F+ +     +G   KP++V  +   +A    G +  G  L  Y 
Sbjct: 391 IMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF-YR 449

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +K     D  +  T  D YA  C V+ +GR
Sbjct: 450 MKH----DHGVEPT-SDHYA--CVVDLLGR 472


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/738 (35%), Positives = 428/738 (57%), Gaps = 6/738 (0%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N+L++M+ +  D   A  +F RMGE+ D+  WN ++  Y+ +G   EAL L+  +   G+
Sbjct: 73  NALLSMFVRFGDVGNAWNVFGRMGER-DLFSWNVLVGGYTKAGFFDEALCLYHRILWAGI 131

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YTF + L++C  +     G E+HA  V+   ++ V V NALI MY +CG +  A  
Sbjct: 132 RPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARM 191

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           +  ++  +D +SWN+M++G+ +ND   + ++ F  ++     PD +   + +SA   LG+
Sbjct: 192 LFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGD 251

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
              G +LH+Y ++  +  ++ + N+L+ MY           VF  M  +D +SWTTII+G
Sbjct: 252 ERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISG 311

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSD 395
              N    KALE ++T+++ G   D + I SVL AC+ L  +    ++H    R G +  
Sbjct: 312 CVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILY 371

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           +V+ N+++D+Y KC  I+ +  +F  I  KDV+SWTS+I+    N    EAL +F+    
Sbjct: 372 VVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEAL-IFFRKMI 430

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
              + +S+TL+SALSA + +  L  GKE++   ++ G   +G + ++++D+Y RCG +  
Sbjct: 431 LKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRT 490

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A   FN +  KD+  W  ++      G+G + ++LF +M      PD +TF++LL ACS 
Sbjct: 491 ALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSR 549

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           SG++ EG ++ + M+ +Y + P  +HYAC+VDLLGRA  L EA++F+  M I+P   +W 
Sbjct: 550 SGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWG 609

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL ACR+H +  LGE+ A+ + + D  + G Y+L+ N++A S KW +V +VR  M+  G
Sbjct: 610 ALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEG 669

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           L   PG SW+E+  K+H+F++ D  H +  EI   L    EK+ +  G+  Q    +  +
Sbjct: 670 LIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKM-KTSGFNGQECSSMDGI 728

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
            +  K  +  GHSER AIAY ++ S  G  I +TKNL +C  CHS  K +S++  RE+ V
Sbjct: 729 -QTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISV 787

Query: 816 RDANRFHHFEAGVCSCGD 833
           RD  +FHHF+ G+CSCGD
Sbjct: 788 RDTEQFHHFKDGLCSCGD 805



 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 193/599 (32%), Positives = 320/599 (53%), Gaps = 19/599 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ + G V +A  +F ++ +R +F+WN ++G Y   G     L  Y R+   GI  D +T
Sbjct: 78  MFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYT 137

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V+++CA   DL  G ++H  V++  +D    +VN+L+ MY KC D   AR LFD+M 
Sbjct: 138 FPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMP 197

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D + WN++IS Y  + +CLE L LF  M+ + +  +  T  + + ACE    E LG 
Sbjct: 198 TR-DRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGT 256

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  V++  +  + V N+LI MY   G   EA  V   +E +D VSW ++++G V N 
Sbjct: 257 QLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNL 316

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  KA++ ++ ++  G  PD+V   + +SA   LG L  G +LH  A + G +  + + N
Sbjct: 317 LPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVAN 376

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMY+KC  +     +F+Q+  +D ISWT++I G   NN   +AL  FR + L+    
Sbjct: 377 SLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSKPN 436

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
            V +I S L AC+ +  +   KEIH + ++ G+  D  + NAI+D+Y +CG +  + N F
Sbjct: 437 SVTLI-SALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF 495

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            ++  KDV +W  +++ Y   G     +ELF  M E+ +  D +T +S L A S   ++ 
Sbjct: 496 -NLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVT 554

Query: 480 KGKELNGFIIRKGFNLEGSVA----SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSM 534
           +G E   +  R   N   +      + +VD+  R G L+ A++    +  K D  +W ++
Sbjct: 555 EGLE---YFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGAL 611

Query: 535 INANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           +NA  +H     G++A    +K +AES    +   L  LYA   SG  +E  K    M+
Sbjct: 612 LNACRIHRHVLLGELAAQHIFKQDAESIG--YYILLCNLYA--DSGKWDEVAKVRRTMK 666


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 259/713 (36%), Positives = 422/713 (59%), Gaps = 27/713 (3%)

Query: 128 WNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
           +N +IS+Y+ +     +   +  M+       + +   + L+AC  +S   LG E+H   
Sbjct: 55  YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114

Query: 187 VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAM 246
            K+G    V+V NAL+ MY +CG +  A  V  Q+  +D VSW +ML  +V++  + +A+
Sbjct: 115 QKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEAL 174

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT--LMD 304
           +  RE+Q  G K   V  ++ ++  G L ++ +G+ +H Y ++      +++  T  L+D
Sbjct: 175 RLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALID 234

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL-KALELFRTVQLEGLDADVM 363
           MY K  C+    R+F +++ +  +SWT +IAG  ++ C L +  + F  +  E L  + +
Sbjct: 235 MYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRS-CRLDEGAKNFNRMLEEKLFPNEI 293

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESI 422
            + S++  C  +  +   K  H Y++R G    L ++ A++D+YGKCG + Y+R +F  +
Sbjct: 294 TLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
           + KDV  W+ +IS+Y H    ++   LF  M   +V+ +++T+VS LS  +    L  GK
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
             + +I R G  ++  + ++L++MYA+CG + IA  +FN    +D+ +W +M+    +HG
Sbjct: 414 WTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHG 473

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
            GK A++LF +ME+    P+ ITF+++ +ACSHSGL+                    EHY
Sbjct: 474 CGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLM--------------------EHY 513

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
            CLVDLLGRA HL+EA+  + +M + P   +W ALL AC++H N  LGE+ A+K+LELDP
Sbjct: 514 GCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDP 573

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
            N G  VL SN++A++++W DV  VR  M  SG+KK PG SWIE+   +H F + DK+ +
Sbjct: 574 QNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACT 633

Query: 723 ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE 782
           ++ ++Y+ + E+  KL RE GY   T  VL N++EEEK   L  HSE+LA A+G++ +  
Sbjct: 634 QTTKVYEMVTEMCIKL-RESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAP 692

Query: 783 GSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G+ IRI KNLR+C DCH+  KL+S+++GR ++VRD NRFHHF  G CSC  YW
Sbjct: 693 GTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 253/521 (48%), Gaps = 25/521 (4%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
           +N ++ +Y +N  P      Y  MR     ++D F  P ++KACA     D G ++HG  
Sbjct: 55  YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
            K G+ S  F+ N+L+ MY KC     AR +FD+M E+ DVV W +++  Y  S    EA
Sbjct: 115 QKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPER-DVVSWTTMLGCYVRSKAFGEA 173

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS--GQNLQVYVANALI 202
           L L REMQ VG+  +    ++ +    +      G  +H   V++   + ++V +  ALI
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
            MY + G +  A  +  +L  +  VSW  M+ G +++    +  + F  +      P+++
Sbjct: 234 DMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEI 293

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
             ++ ++  G +G L  GK  HAY ++ GF   L +   L+DMY KC  V Y   +F  +
Sbjct: 294 TLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
             +D   W+ +I+ YA  +C  +   LF  +    +  + + + S+L  C+    +   K
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413

Query: 383 EIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
             H YI R GL  D+++  A++++Y KCG++  +R++F     +D+  W +M++ +  +G
Sbjct: 414 WTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHG 473

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
              EALELF  M    VE + IT VS   A S   +++                      
Sbjct: 474 CGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLMEH-------------------YG 514

Query: 502 SLVDMYARCGALDIANKVF-NCVQTKDLILWTSMINANGLH 541
            LVD+  R G LD A+ +  N     + I+W +++ A  LH
Sbjct: 515 CLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLH 555



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 217/450 (48%), Gaps = 29/450 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSN---GEPLRVLETYSRMRVLGISVD 57
           MY KCG ++ A  +FD++ +R V +W  MLG YV +   GE LR++     M+ +G+ + 
Sbjct: 132 MYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVR---EMQFVGVKLS 188

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLK-CGYDSTDF-IVNSLVAMYAKCYDFRKARQL 115
                 +I     L D+  G  +HG +++  G +  +  +  +L+ MY K      A++L
Sbjct: 189 GVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRL 248

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FDR+  K  VV W  +I+    S +  E    F  M    L  N  T ++ +  C     
Sbjct: 249 FDRL-SKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGT 307

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             LG   HA  +++G  + + +  ALI MY +CG++  A  +   ++ KD   W+ +++ 
Sbjct: 308 LDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISA 367

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +       +    F E+     KP+ V  V+ +S     G L  GK  HAY  + G   D
Sbjct: 368 YAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVD 427

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + +   L++MYAKC  V     +F +   +D   W T++AG++ + C  +ALELF  ++ 
Sbjct: 428 VILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMES 487

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYS 415
            G++ + +   S+  ACS     S   E +G               +VD+ G+ G++D +
Sbjct: 488 HGVEPNDITFVSIFHACS----HSGLMEHYG--------------CLVDLLGRAGHLDEA 529

Query: 416 RNVFESIESK-DVVSWTSMISS-YVHNGLA 443
            N+ E++  + + + W +++++  +H  LA
Sbjct: 530 HNIIENMPMRPNTIIWGALLAACKLHKNLA 559


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 251/626 (40%), Positives = 388/626 (61%), Gaps = 19/626 (3%)

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           +W+S++  +  + L   +   F  ++     P++    + + AS  L +      LHA  
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 288 IKQGFVSDLQIGNTLMDMYAKC---------------CCVNYMGRVFYQMTAQDFISWTT 332
           ++ G  SDL I N L++ YAK                  ++ + +VF  M  +D +SW T
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 333 IIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
           +IAG+AQN  +++AL++ R +   G L  D   + S+L   +    +++ KEIHGY +R 
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 392 GLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           G   D+ I ++++D+Y KC  ++ S   F  +  KD +SW S+I+  V NG  +  L  F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
             M + NV+  +++  S + A + L+ L  G++L+G I+R GF+    +ASSLVDMYA+C
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKC 376

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G + +A  VF+ +  +D++ WT++I    +HG    A+ LF  M  +   P ++ F+A+L
Sbjct: 377 GNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVL 436

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ-IEP 629
            ACSH+GL++EG ++   M  D+ + P  EHYA + DLLGRA  LEEAY F+ +M+ ++P
Sbjct: 437 TACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQP 496

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
           T  VW  LL ACR H + EL E V  KLL +D  N G YVL+SN+++A+++WKD  ++R+
Sbjct: 497 TGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRI 556

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
            MR  GLKKTP  SWIE+GN++H+F+A DKSH   D+I K L  + E++E+E GYV  T 
Sbjct: 557 HMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKE-GYVIDTN 615

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
            VLH+V+EE K ++L+ HSERLAIAYG++ +T G+ IR+ KN+RVC DCH+  K ++++ 
Sbjct: 616 QVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIV 675

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
           GRE+ VRD +RFHHF+ G CSCGDYW
Sbjct: 676 GREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 218/425 (51%), Gaps = 26/425 (6%)

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
            LF+ +      + W+SII  Y++      +   F  M+ + +  N + F + L+A    
Sbjct: 64  HLFNSLPSPPPPLAWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLL 123

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYAR---CGKMTE------------AAGVL 218
               L   +HA TV+ G +  +Y+ANALI  YA+    GK+ +               V 
Sbjct: 124 KHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVF 183

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNL 277
             +  +D VSWN+++ GF QN +Y +A+   RE+   G+ KPD     + +       ++
Sbjct: 184 DMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDV 243

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             GKE+H YA++ GF  D+ IG++L+DMYAKC  +    R FY +  +D ISW +IIAG 
Sbjct: 244 NKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGC 303

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-L 396
            QN    + L  FR +  E +    +   SV+ AC+ L  +S  +++HG I+R G  D  
Sbjct: 304 VQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNE 363

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            I +++VD+Y KCGNI  +R VF+ I+ +D+V+WT++I     +G A +A+ LF  M E 
Sbjct: 364 FIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLED 423

Query: 457 NVESDSITLVSALSAASSLSILKKG-KELNG----FIIRKGFNLEGSVASSLVDMYARCG 511
            V    +  ++ L+A S   ++ +G +  N     F I  G     +VA    D+  R G
Sbjct: 424 GVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVA----DLLGRAG 479

Query: 512 ALDIA 516
            L+ A
Sbjct: 480 RLEEA 484



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 188/363 (51%), Gaps = 15/363 (4%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           W++++  Y S+        +++ MR L +  +   FP ++KA  +LK       +H   +
Sbjct: 78  WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK--------------EDVVLWNSI 131
           + G DS  +I N+L+  YAK ++  K   +F + GE                DVV WN++
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTV 197

Query: 132 ISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           I+ ++ +G  +EAL + REM + G L  +++T  + L    +      G EIH   V++G
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG 257

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +  V++ ++LI MYA+C ++  +    Y L  KD++SWNS++ G VQN  + + + FFR
Sbjct: 258 FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            +     KP  V   + + A   L  L  G++LH   ++ GF  +  I ++L+DMYAKC 
Sbjct: 318 RMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCG 377

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            +     VF ++  +D ++WT II G A +   L A+ LF  +  +G+    +   +VL 
Sbjct: 378 NIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLT 437

Query: 371 ACS 373
           ACS
Sbjct: 438 ACS 440



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 136/265 (51%), Gaps = 2/265 (0%)

Query: 12  EQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFTFPCVIKACAM 70
           +++FD +  R V +WN ++  +  NG  +  L+    M   G +  D+FT   ++   A 
Sbjct: 180 KKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAE 239

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
             D++ G +IHG  ++ G+D   FI +SL+ MYAKC     + + F  +  K D + WNS
Sbjct: 240 HVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRK-DAISWNS 298

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           II+    +G+    LG FR M +  +   A +F + + AC   +  +LG ++H   V+ G
Sbjct: 299 IIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLG 358

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +   ++A++L+ MYA+CG +  A  V  +++ +D V+W +++ G   +     A+  F 
Sbjct: 359 FDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFE 418

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLG 275
            +   G +P  V  +  ++A    G
Sbjct: 419 NMLEDGVRPCYVAFMAVLTACSHAG 443



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 111/217 (51%), Gaps = 6/217 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  + + F  + ++   +WN+++   V NGE  R L  + RM    +   A +
Sbjct: 271 MYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVS 330

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VI ACA L  L  G ++HG +++ G+D  +FI +SLV MYAKC + + AR +FDR+ 
Sbjct: 331 FSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRI- 389

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K D+V W +II   +  G  L+A+ LF  M   G+      F+A L AC  +     G 
Sbjct: 390 DKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGW 449

Query: 181 EIHAATVKS---GQNLQVYVANALIAMYARCGKMTEA 214
               +  +       L+ Y A A   +  R G++ EA
Sbjct: 450 RYFNSMERDFGIAPGLEHYAAVA--DLLGRAGRLEEA 484


>gi|222629025|gb|EEE61157.1| hypothetical protein OsJ_15124 [Oryza sativa Japonica Group]
          Length = 383

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 228/383 (59%), Positives = 292/383 (76%)

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M  A ++ DS+ LV  L A + LS L KGKE++GF+IR  F +EG+V SSLVDMY+ CG+
Sbjct: 1   MLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGS 60

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           ++ A KVF+  + KD++LWT+MINA G+HG GK AI +F +M     +PDH++FLALLYA
Sbjct: 61  MNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYA 120

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CSHS L++EGK +L++M   Y+L PW EHYAC+VDLLGR+   EEAY+F++SM +EP + 
Sbjct: 121 CSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSV 180

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           VWCALLGACR+H N EL  I   KLLEL+P NPGNYVL+SNVFA   KW +V+++R +M 
Sbjct: 181 VWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMT 240

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
             GL+K P  SWIEIGN +H+F ARD SH +S  I+ KLAEITEKL REG YV  T FVL
Sbjct: 241 EQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVL 300

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
           H+V EEEK+ +L+ HSERLAI++G++ +  G+ +RI KNLRVC DCH F KLVS+LF RE
Sbjct: 301 HDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFERE 360

Query: 813 LVVRDANRFHHFEAGVCSCGDYW 835
           +VVRDANRFHHF  G CSCGD+W
Sbjct: 361 IVVRDANRFHHFSGGTCSCGDFW 383



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYS 415
           G+  D + +  +L A +GL  +++ KEIHG++IR K   +  +++++VD+Y  CG+++Y+
Sbjct: 5   GIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYA 64

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             VF+  + KDVV WT+MI++   +G   +A+ +F  M E  V  D ++ ++ L A S  
Sbjct: 65  LKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHS 124

Query: 476 SILKKGKELNGFIIRKGFNLEG--SVASSLVDMYARCGALDIANKVFNCVQTKDL-ILWT 532
            ++ +GK     ++ K + L+      + +VD+  R G  + A K    +  +   ++W 
Sbjct: 125 KLVDEGKFYLDMMVSK-YKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWC 183

Query: 533 SMINANGLHGRGKVAIDLFYK-MEAESFAPDHITFLALLYA 572
           +++ A  +H   ++A+    K +E E   P +   ++ ++A
Sbjct: 184 ALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFA 224



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 17/267 (6%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           GI  D+     ++ A A L  L  G +IHG +++  +     +V+SLV MY+ C     A
Sbjct: 5   GIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYA 64

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
            ++FD   + +DVVLW ++I+A    G   +A+ +F+ M   G+  +  +F+A L AC  
Sbjct: 65  LKVFDE-AKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSH 123

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLE-NKDSVSW 229
           S     G + +   + S   LQ +  +   ++ +  R G+  EA   +  +     SV W
Sbjct: 124 SKLVDEG-KFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVW 182

Query: 230 NSMLTG---FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
            ++L        ++L   A     EL+     P     V+ V A   +G   N KE+   
Sbjct: 183 CALLGACRIHKNHELAMIATDKLLELE--PDNPGNYVLVSNVFA--EMGKWNNVKEIRTK 238

Query: 287 AIKQGFVSD-----LQIGNTLMDMYAK 308
             +QG   D     ++IGNT+    A+
Sbjct: 239 MTEQGLRKDPACSWIEIGNTVHTFTAR 265



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 5/186 (2%)

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
           AG +PD V  V  + A   L +L  GKE+H + I+  F  +  + ++L+DMY+ C  +NY
Sbjct: 4   AGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNY 63

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             +VF +   +D + WT +I     +    +A+ +F+ +   G+  D +   ++L ACS 
Sbjct: 64  ALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSH 123

Query: 375 LKCMSQTKEIHGYIIRK-GLSDLVILNA-IVDVYGKCGNIDYSRNVFES--IESKDVVSW 430
            K + + K     ++ K  L       A +VD+ G+ G  + +    +S  +E K VV W
Sbjct: 124 SKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVV-W 182

Query: 431 TSMISS 436
            +++ +
Sbjct: 183 CALLGA 188



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 14/181 (7%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M   G+  ++   V  L A    S  T G EIH   ++    ++  V ++L+ MY+ CG 
Sbjct: 1   MLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGS 60

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           M  A  V  + + KD V W +M+     +    +A+  F+ +   G  PD V  +  + A
Sbjct: 61  MNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYA 120

Query: 271 SGRLGNLLNGKELHAYAIKQG-FVSDLQIGNTLMDMYAK--CCCVNYMGRVFYQMTAQDF 327
                        H+  + +G F  D+ +    +  + +   C V+ +GR      A  F
Sbjct: 121 CS-----------HSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKF 169

Query: 328 I 328
           I
Sbjct: 170 I 170



 Score = 46.6 bits (109), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CGS+  A ++FD+   + V  W AM+ A   +G   + +  + RM   G+S D  +
Sbjct: 54  MYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVS 113

Query: 61  FPCVIKACAMLKDLDCG 77
           F  ++ AC+  K +D G
Sbjct: 114 FLALLYACSHSKLVDEG 130


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 258/635 (40%), Positives = 397/635 (62%), Gaps = 18/635 (2%)

Query: 215  AGVLYQLENKDSV-SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ---VCTVNAVSA 270
            A   Y+  +K +V SWNS++    +     +A++ F  L+  G  P +    CT+ + SA
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027

Query: 271  SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
               L +L++G+  H  A   GF +DL + + L+DMY+KC  +     +F ++  ++ +SW
Sbjct: 2028 ---LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSW 2084

Query: 331  TTIIAGYAQNNCHLKALELFRTVQLE--------GLDADVMIIGSVLMACSGLKCMSQTK 382
            T++I GY QN     AL LF+    E         +  D +++ SVL ACS +     T+
Sbjct: 2085 TSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITE 2144

Query: 383  EIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
             +HG++++KG    + + N ++D Y KCG    S+ VF+ +E KD +SW SMI+ Y  +G
Sbjct: 2145 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 2204

Query: 442  LANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
            L+ EALE+F+ ++    V  +++TL + L A +    L+ GK ++  +I+        V 
Sbjct: 2205 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 2264

Query: 501  SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
            +S++DMY +CG +++A K F+ ++ K++  WT+M+   G+HGR K A+D+FYKM      
Sbjct: 2265 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 2324

Query: 561  PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
            P++ITF+++L ACSH+GL+ EG  +   M+  Y ++P  EHY C+VDL GRA  L EAY 
Sbjct: 2325 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 2384

Query: 621  FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
             ++ M+++P   VW +LLGACR+H N +LGEI A+KL ELDP N G YVL+SN++A + +
Sbjct: 2385 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 2444

Query: 681  WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
            W DVE++RM M+   L K PG S +E+  ++H F+  DK H   + IYK L ++T +L++
Sbjct: 2445 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQK 2504

Query: 741  EGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHS 800
              GYV     VLH+V+EEEK  +L  HSE+LA+A+GV+ S  G+ I I KNLRVC DCH+
Sbjct: 2505 -IGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHT 2563

Query: 801  FCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
              KL+S+L  R+ VVRD+ RFHHF+ GVCSCGDYW
Sbjct: 2564 VIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 286/544 (52%), Gaps = 44/544 (8%)

Query: 116  FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            F +  +K +V  WNS+I+  +  G  +EAL  F  ++++GL+    +F   +++C     
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030

Query: 176  ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
               G   H      G    ++V++ALI MY++CG++ +A  +  ++  ++ VSW SM+TG
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 2090

Query: 236  FVQNDLYCKAMQFFR-------ELQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYA 287
            +VQN+    A+  F+       E++     P D V  V+ +SA  R+      + +H + 
Sbjct: 2091 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 2150

Query: 288  IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
            +K+GF   + +GNTLMD YAKC       +VF  M  +D ISW ++IA YAQ+    +AL
Sbjct: 2151 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 2210

Query: 348  ELFR-TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDV 405
            E+F   V+  G+  + + + +VL+AC+    +   K IH  +I+  L  ++ +  +I+D+
Sbjct: 2211 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDM 2270

Query: 406  YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
            Y KCG ++ ++  F+ ++ K+V SWT+M++ Y  +G A EAL++FY M  A V+ + IT 
Sbjct: 2271 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 2330

Query: 466  VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCV 523
            VS L+A S   ++++G      +  K +++E  +     +VD++ R G L+ A  +   +
Sbjct: 2331 VSVLAACSHAGLVEEGWHWFNAMKHK-YDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRM 2389

Query: 524  QTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
            + K D ++W S++ A  +H     G++A    ++++     PD+  +  LL     S L 
Sbjct: 2390 KMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELD-----PDNCGYYVLL-----SNLY 2439

Query: 580  NEGKKFLEIMRC-----DYQLDPWPEHYACLVDLLGRAN----------HLEEAYQFVRS 624
             +  ++ ++ R      + QL   P     LV+L GR +          H E  Y+++  
Sbjct: 2440 ADAGRWADVERMRMLMKNRQLVKPPGF--SLVELKGRVHVFLVGDKEHPHHEMIYKYLEK 2497

Query: 625  MQIE 628
            + +E
Sbjct: 2498 LTLE 2501



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 199/382 (52%), Gaps = 32/382 (8%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           N  + +++HA  I+ G  +D  +   L+ +Y+    + Y   +FYQ+      +W  II 
Sbjct: 39  NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
               N    +AL L++ +  +G+ AD      V+ AC+    +   K +HG +I+ G S 
Sbjct: 99  ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158

Query: 395 DLVILNAIVDVYGKCGNIDY-------------------------------SRNVFESIE 423
           D+ + N ++D Y KCG+  +                               +R +F+ I 
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
           SK+VVSWT+MI+ Y+ N    EALELF  M   N+  +  T+VS + A + + IL  G+ 
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++ + I+    +   + ++L+DMY++CG++  A +VF  +  K L  W SMI + G+HG 
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
           G+ A++LF +ME  +  PD ITF+ +L AC H   + EG  +   M   Y + P PEHY 
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYE 398

Query: 604 CLVDLLGRANHLEEAYQFVRSM 625
           C+ +L  R+N+L+EA++  + +
Sbjct: 399 CMTELYARSNNLDEAFKSTKEV 420



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 219/443 (49%), Gaps = 23/443 (5%)

Query: 11   AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
            A   +  V +  V +WN+++      G+ +  L  +S +R LG+     +FPC IK+C+ 
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027

Query: 71   LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
            L DL  G   H      G+++  F+ ++L+ MY+KC   + AR LFD +  + +VV W S
Sbjct: 2028 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTS 2086

Query: 131  IISAYSASGQCLEALGLFREMQRV--------GLVTNAYTFVAALQACEDSSFETLGMEI 182
            +I+ Y  + Q   AL LF++             +  ++   V+ L AC   S + +   +
Sbjct: 2087 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGV 2146

Query: 183  HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
            H   VK G +  + V N L+  YA+CG+   +  V   +E KD +SWNSM+  + Q+ L 
Sbjct: 2147 HGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLS 2206

Query: 243  CKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ F  + +  G + + V     + A    G L  GK +H   IK     ++ +G +
Sbjct: 2207 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 2266

Query: 302  LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
            ++DMY KC  V    + F +M  ++  SWT ++AGY  +    +AL++F  +   G+  +
Sbjct: 2267 IIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN 2326

Query: 362  VMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
             +   SVL ACS       G    +  K  H Y I  G+        +VD++G+ G ++ 
Sbjct: 2327 YITFVSVLAACSHAGLVEEGWHWFNAMK--HKYDIEPGIEH---YGCMVDLFGRAGCLNE 2381

Query: 415  SRNVFESIESK-DVVSWTSMISS 436
            + N+ + ++ K D V W S++ +
Sbjct: 2382 AYNLIKRMKMKPDFVVWGSLLGA 2404



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 150/311 (48%), Gaps = 32/311 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   G +  A  LF ++     FTWN ++ A   NG   + L  Y  M   GI+ D FT
Sbjct: 68  LYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFT 127

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY------------- 107
           FP VIKAC     +D G  +HG ++K G+    F+ N+L+  Y KC              
Sbjct: 128 FPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMR 187

Query: 108 ------------------DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                             D ++AR++FD +  K +VV W ++I+ Y  + Q  EAL LF+
Sbjct: 188 VRNVVSWTTVISGLISCGDLQEARRIFDEIPSK-NVVSWTAMINGYIRNQQPEEALELFK 246

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
            MQ   +  N YT V+ ++AC +    TLG  IH   +K+   + VY+  ALI MY++CG
Sbjct: 247 RMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCG 306

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + +A  V   +  K   +WNSM+T    + L  +A+  F E++    KPD +  +  + 
Sbjct: 307 SIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLC 366

Query: 270 ASGRLGNLLNG 280
           A   + N+  G
Sbjct: 367 ACVHIKNVKEG 377



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 173/351 (49%), Gaps = 20/351 (5%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVL--------ETYSRMRVL 52
            MY KCG + DA  LFD++  R V +W +M+  YV N +    L        E        
Sbjct: 2059 MYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGN 2118

Query: 53   GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
             + +D+     V+ AC+ +        +HG V+K G+D +  + N+L+  YAKC     +
Sbjct: 2119 NVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVS 2178

Query: 113  RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQACE 171
            +++FD M EK+D+  WNS+I+ Y+ SG   EAL +F  M R VG+  NA T  A L AC 
Sbjct: 2179 KKVFDWMEEKDDIS-WNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACA 2237

Query: 172  DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
             +     G  IH   +K      V V  ++I MY +CG++  A     +++ K+  SW +
Sbjct: 2238 HAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTA 2297

Query: 232  MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-----HAY 286
            M+ G+  +    +A+  F ++  AG KP+ +  V+ ++A    G +  G        H Y
Sbjct: 2298 MVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKY 2357

Query: 287  AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG 336
             I+ G    ++    ++D++ +  C+N    +  +M  + DF+ W +++  
Sbjct: 2358 DIEPG----IEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 2404



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 171/386 (44%), Gaps = 43/386 (11%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++ C   K L    +IH  +++ G  +   +   L+ +Y+       A  LF ++ +  
Sbjct: 33  LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQI-QNP 88

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
               WN II A + +G   +AL L++ M   G+  + +TF   ++AC +     LG  +H
Sbjct: 89  CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148

Query: 184 AATVKSGQNLQVYVANALIAMYARCG-------------------------------KMT 212
            + +K G +  V+V N LI  Y +CG                                + 
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
           EA  +  ++ +K+ VSW +M+ G+++N    +A++ F+ +Q     P++   V+ + A  
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
            +G L  G+ +H YAIK      + +G  L+DMY+KC  +     VF  M  +   +W +
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK- 391
           +I     +    +AL LF  ++   +  D +    VL AC  +K     KE   Y  R  
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIK---NVKEGCAYFTRMT 385

Query: 392 ---GLSDLV-ILNAIVDVYGKCGNID 413
              G++ +      + ++Y +  N+D
Sbjct: 386 QHYGIAPIPEHYECMTELYARSNNLD 411



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 149/313 (47%), Gaps = 45/313 (14%)

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L  C   K + Q   IH  IIR GLS D ++   ++ +Y   G I Y+  +F  I++  
Sbjct: 33  LLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
             +W  +I +   NGL+ +AL L+  M    + +D  T    + A ++   +  GK ++G
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 487 FIIRKGFNLEGSVASSLVDMYARCG----ALDI--------------------------- 515
            +I+ GF+ +  V ++L+D Y +CG    AL +                           
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A ++F+ + +K+++ WT+MIN    + + + A++LF +M+AE+  P+  T ++L+ AC+ 
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPE----HYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
            G++  G+        DY +    E        L+D+  +   +++A +   +M    + 
Sbjct: 270 MGILTLGRGI-----HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSL 323

Query: 632 EVWCALLGACRVH 644
             W +++ +  VH
Sbjct: 324 PTWNSMITSLGVH 336



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 8/148 (5%)

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
           SY H+   ++ + L            +I    AL    +    K  ++++  IIR G + 
Sbjct: 6   SYTHDVFPSKNIPL--------TPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSN 57

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  +   L+ +Y+  G +  A  +F  +Q      W  +I AN ++G  + A+ L+  M 
Sbjct: 58  DQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMV 117

Query: 556 AESFAPDHITFLALLYACSHSGLINEGK 583
            +  A D  TF  ++ AC++   I+ GK
Sbjct: 118 CQGIAADKFTFPFVIKACTNFLSIDLGK 145


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 259/745 (34%), Positives = 427/745 (57%), Gaps = 28/745 (3%)

Query: 94   FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
            F +N +++ Y+   D   A+ LF       +   W  ++ A++A+G+  +AL LFR M  
Sbjct: 289  FSLNLILSAYSSSGDLPAAQHLF-LSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 347

Query: 154  VGLVTN--AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
             G++ +    T V  L  C   S       +H   +K G +  V+V N L+  Y + G +
Sbjct: 348  EGVIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 400

Query: 212  TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
              A  V  ++ +KD+V++N+M+ G  +  L+ +A+Q F  ++ AG     +  +    + 
Sbjct: 401  AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSR 460

Query: 272  GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             R  ++LN                + + N+L+D Y+KC C++ M R+F +M  +D +S+ 
Sbjct: 461  SRSTSVLN----------------VFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYN 504

Query: 332  TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
             IIA YA N C    L LFR +Q  G D  V+   ++L     L  +   K+IH  ++  
Sbjct: 505  VIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL 564

Query: 392  GL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
            GL S+ ++ NA++D+Y KCG +D +++ F +   K  +SWT++I+ YV NG   EAL+LF
Sbjct: 565  GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 624

Query: 451  YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
              M  A +  D  T  S + A+SSL+++  G++L+ ++IR G+       S LVDMYA+C
Sbjct: 625  SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC 684

Query: 511  GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
            G LD A + F+ +  ++ I W ++I+A   +G  K AI +F  M    F PD +TFL++L
Sbjct: 685  GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 744

Query: 571  YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
             ACSH+GL +E  K+  +M+  Y + PW EHYAC++D LGR     +  + +  M  +  
Sbjct: 745  AACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKAD 804

Query: 631  AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
              +W ++L +CR+H N+EL  + A KL  ++P +   YV++SN++A + +W+D   V+  
Sbjct: 805  PIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 864

Query: 691  MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
            MR  G++K  G SW+EI  KI+SF + D +    DEI  +L  + ++++++ GY      
Sbjct: 865  MRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQ-GYKPDITC 923

Query: 751  VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
             LH V+ E K++ L  HSERLAIA+ ++ +  G+ IRI KNL  C+DCH+  K++S++  
Sbjct: 924  ALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVN 983

Query: 811  RELVVRDANRFHHFEAGVCSCGDYW 835
            R+++VRD+ RFHHF+ GVCSCGDYW
Sbjct: 984  RDIIVRDSRRFHHFKDGVCSCGDYW 1008



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 154/569 (27%), Positives = 268/569 (47%), Gaps = 34/569 (5%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A+ LF     R   TW  M+ A+ + G     L  +  M   G+  D  T 
Sbjct: 298 YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTV 357

Query: 62  PCVI--KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
             V+    C +         +H   +K G D+  F+ N+L+  Y K      AR++F  M
Sbjct: 358 TTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM 410

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +K D V +N+++   S  G   +AL LF  M+R G   +       LQ     S     
Sbjct: 411 HDK-DAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHL---LQYSHSRS----- 461

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                   +S   L V+V N+L+  Y++C  + +   +  ++  +D+VS+N ++  +  N
Sbjct: 462 --------RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWN 513

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                 ++ FRE+Q  G     +     +S +G L ++  GK++HA  +  G  S+  +G
Sbjct: 514 QCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLG 573

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+DMY+KC  ++     F   + +  ISWT +I GY QN  H +AL+LF  ++  GL 
Sbjct: 574 NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 633

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI-VDVYGKCGNIDYSRNV 418
            D     S++ A S L  +   +++H Y+IR G    V   ++ VD+Y KCG +D +   
Sbjct: 634 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 693

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  ++ +SW ++IS+Y H G A  A+++F  M       DS+T +S L+A S   + 
Sbjct: 694 FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLA 753

Query: 479 KKGKELNGFIIRKGFNLEG--SVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
            +  +    +++  +++       + ++D   R G      K+   +  K D I+WTS++
Sbjct: 754 DECMKYF-HLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 812

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAP 561
           ++  +HG     +VA D  + ME     P
Sbjct: 813 HSCRIHGNQELARVAADKLFGMEPTDATP 841



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 207/447 (46%), Gaps = 24/447 (5%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           ++  N +++ Y+  G +  A  +     ++++ +W  M+           A+  FR + G
Sbjct: 288 IFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 347

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G  PD+V     ++  G          LH +AIK G  + + + NTL+D Y K   +  
Sbjct: 348 EGVIPDRVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAA 402

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             RVF +M  +D +++  ++ G ++   H +AL+LF  ++  G     + +         
Sbjct: 403 ARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHL--------- 453

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
                  +  H       + ++ + N+++D Y KC  +D  R +F+ +  +D VS+  +I
Sbjct: 454 ------LQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVII 507

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           ++Y  N  A   L LF  M +   +   +   + LS A SL  +  GK+++  ++  G  
Sbjct: 508 AAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA 567

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            E  + ++L+DMY++CG LD A   F+    K  I WT++I     +G+ + A+ LF  M
Sbjct: 568 SEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDM 627

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRAN 613
                 PD  TF +++ A S   +I  G++    ++R  Y+   +    + LVD+  +  
Sbjct: 628 RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG--SVLVDMYAKCG 685

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGA 640
            L+EA +    M  E  +  W A++ A
Sbjct: 686 CLDEALRTFDEMP-ERNSISWNAVISA 711



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 184/387 (47%), Gaps = 26/387 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KC  + D  +LFD++ +R   ++N ++ AY  N     VL  +  M+ LG       +
Sbjct: 479 YSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPY 538

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++     L D+  G +IH  ++  G  S D + N+L+ MY+KC     A+  F    E
Sbjct: 539 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSE 598

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K   + W ++I+ Y  +GQ  EAL LF +M+R GL  +  TF + ++A    +   LG +
Sbjct: 599 KS-AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 657

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H+  ++SG    V+  + L+ MYA+CG + EA     ++  ++S+SWN++++ +     
Sbjct: 658 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 717

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG---------NLLNGKELHAYAI---K 289
              A++ F  +   G  PD V  ++ ++A    G         +L+     H Y+I   K
Sbjct: 718 AKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK----HQYSISPWK 773

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKAL 347
           + +         ++D   +  C + + ++  +M  + D I WT+I+       N  L  +
Sbjct: 774 EHYA-------CVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARV 826

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSG 374
              +   +E  DA   +I S + A +G
Sbjct: 827 AADKLFGMEPTDATPYVILSNIYARAG 853



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 11/239 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A+  F   S+++  +W A++  YV NG+    L+ +S MR  G+  D  T
Sbjct: 579 MYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRAT 638

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IKA + L  +  G ++H  +++ GY S+ F  + LV MYAKC    +A + FD M 
Sbjct: 639 FSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP 698

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE-----DSSF 175
           E+  +  WN++ISAY+  G+   A+ +F  M   G   ++ TF++ L AC      D   
Sbjct: 699 ERNSIS-WNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 757

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
           +   +  H  ++   +     V + L     R G  ++   +L ++  K D + W S+L
Sbjct: 758 KYFHLMKHQYSISPWKEHYACVIDTL----GRVGCFSQVQKMLVEMPFKADPIIWTSIL 812


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 241/625 (38%), Positives = 402/625 (64%), Gaps = 11/625 (1%)

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           ++  +  SWNS++    ++    +A++ F  ++    KP++     A+ +   L +L +G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           ++ H  A+  GF  DL + + L+DMY+KC  +     +F +++ ++ +SWT++I GY QN
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231

Query: 341 NCHLKALELFRTVQLEGLDA--------DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           +   +AL LF+   +E   +        D + + SVL ACS +   S T+ +HG++I++G
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291

Query: 393 LS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
              DL + N ++D Y KCG +  SR VF+ +  +DV+SW S+I+ Y  NG++ E++E+F+
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 351

Query: 452 LM-NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
            M  +  +  +++TL + L A +     + GK ++  +I+ G      V +S++DMY +C
Sbjct: 352 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKC 411

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G +++A K F+ ++ K++  W++M+   G+HG  K A+++FY+M      P++ITF+++L
Sbjct: 412 GKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVL 471

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            ACSH+GL+ EG  + + M  ++ ++P  EHY C+VDLLGRA +L+EA+  ++ M++ P 
Sbjct: 472 AACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPD 531

Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
             VW ALLGACR+H N +LGEI A+KL ELDP N G YVL+SN++A + +W+DVE++R+ 
Sbjct: 532 FVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRIL 591

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
           M+ SGL K PG S ++I  ++H F+  D+ H + ++IY+ L +++ KL+ E GYV     
Sbjct: 592 MKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQ-EVGYVPDMTS 650

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
           VLH+V  EEK  +L  HSE+LA+A+G++ +  G+ I I KNLRVC DCH+  K +S++  
Sbjct: 651 VLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVD 710

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           RE+VVRD+ RFHHF  G+CSCGDYW
Sbjct: 711 REIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 228/447 (51%), Gaps = 36/447 (8%)

Query: 14  LFDK-VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           LF+K V +  VF+WN+++     +G+ +  L  +S MR L +  +  TFPC IK+C+ L 
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           DL  G + H   L  G++   F+ ++LV MY+KC + R AR LFD +  + ++V W S+I
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR-NIVSWTSMI 225

Query: 133 SAYSASGQCLEALGLFRE--MQRVG------LVTNAYTFVAALQACEDSSFETLGMEIHA 184
           + Y  +     AL LF+E  ++  G      +  +    V+ L AC   S +++   +H 
Sbjct: 226 TGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             +K G    + V N L+  YA+CG++  +  V   +  +D +SWNS++  + QN +  +
Sbjct: 286 FLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTE 345

Query: 245 AMQFFRELQGAGQKPDQVCTVNAV-SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +M+ F  +   G+      T++AV  A    G+   GK +H   IK G  S++ +G +++
Sbjct: 346 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSII 405

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMY KC  V    + F +M  ++  SW+ ++AGY  +    +ALE+F  + + G+  + +
Sbjct: 406 DMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYI 465

Query: 364 IIGSVLMACS--GL--------KCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
              SVL ACS  GL        K MS     H + +  G+        +VD+ G+ G   
Sbjct: 466 TFVSVLAACSHAGLLEEGWHWFKAMS-----HEFDVEPGVEH---YGCMVDLLGRAG--- 514

Query: 414 YSRNVFESIES----KDVVSWTSMISS 436
           Y +  F+ I+      D V W +++ +
Sbjct: 515 YLKEAFDLIKGMKLRPDFVVWGALLGA 541



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 185/370 (50%), Gaps = 20/370 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-------- 52
           MY KCG + DA  LFD++S R + +W +M+  YV N +  R L  +    V         
Sbjct: 196 MYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDG 255

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
            + VD      V+ AC+ + +      +HG ++K G++    + N+L+  YAKC +   +
Sbjct: 256 EVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVS 315

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACE 171
           R++FD M E+ DV+ WNSII+ Y+ +G   E++ +F  M + G +  NA T  A L AC 
Sbjct: 316 RRVFDGMAER-DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACA 374

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            S  + LG  IH   +K G    V+V  ++I MY +CGK+  A     ++  K+  SW++
Sbjct: 375 HSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSA 434

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY-AIKQ 290
           M+ G+  +    +A++ F E+  AG KP+ +  V+ ++A    G L  G   H + A+  
Sbjct: 435 MVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG--WHWFKAMSH 492

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
            F  D++ G   ++ Y   C V+ +GR  Y   A D I    +   +      L A  + 
Sbjct: 493 EF--DVEPG---VEHYG--CMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 545

Query: 351 RTVQLEGLDA 360
           + V L  + A
Sbjct: 546 KNVDLGEISA 555


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/687 (36%), Positives = 410/687 (59%), Gaps = 42/687 (6%)

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
           K   +L  ++A   I +Y+  G +  A  +  ++   D  +W  +++   ++    +A+Q
Sbjct: 4   KLPTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQ 63

Query: 248 FFRELQGAG-QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
           ++ + +     +PD++  ++   A   L +++N K +H  AI+ GF SD+ +GN L+DMY
Sbjct: 64  YYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMY 123

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL--KALELFRTVQLEGLDADVMI 364
            KC C      VF  M  +D ISWT++ + Y   NC L  +AL  FR + L G   + + 
Sbjct: 124 GKCRCSEGARLVFEGMPFRDVISWTSMASCYV--NCGLLREALGAFRKMGLNGERPNSVT 181

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + S+L AC+ LK +   +E+HG+++R G+  ++ + +A+V++Y  C +I  ++ VF+S+ 
Sbjct: 182 VSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMS 241

Query: 424 SKDVVSWTSMISSY-----------------------------------VHNGLANEALE 448
            +D VSW  +I++Y                                   + NG   +ALE
Sbjct: 242 RRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALE 301

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           +   M  +  + + IT+ S L A ++L  L+ GK+++G+I R  F  + +  ++LV MYA
Sbjct: 302 VLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYA 361

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           +CG L+++ +VF+ +  +D + W +MI A  +HG G+ A+ LF +M      P+ +TF  
Sbjct: 362 KCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTG 421

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L  CSHS L++EG    + M  D+ ++P  +H++C+VD+L RA  LEEAY+F++ M IE
Sbjct: 422 VLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIE 481

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
           PTA  W ALLG CRV+ N ELG I A +L E++  NPGNYVL+SN+  +++ W +  + R
Sbjct: 482 PTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETR 541

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
             MR  G+ K PG SWI++ N++H+F+  DKS+ +SDEIY+ L  + EK+ R  GY+  T
Sbjct: 542 KLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKM-RIAGYLPNT 600

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
            FVL +V++EEK ++L  HSE+LA+A+GVL     S IR+ KNLR+C DCH+  K ++++
Sbjct: 601 DFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKI 660

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
            G +++VRD+ RFHHF  G+CSC D+W
Sbjct: 661 VGVKIIVRDSLRFHHFRDGLCSCQDFW 687



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 192/409 (46%), Gaps = 37/409 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           +Y   G +  A  LFDK+ Q  + TW  ++ A   +G  L  ++ Y+  R    +  D  
Sbjct: 20  VYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKL 79

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
               V KACA L+D+    ++H   ++ G+ S   + N+L+ MY KC     AR +F+ M
Sbjct: 80  LLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGM 139

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + DV+ W S+ S Y   G   EALG FR+M   G   N+ T  + L AC D      G
Sbjct: 140 PFR-DVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSG 198

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT----- 234
            E+H   V++G    V+V++AL+ MYA C  + +A  V   +  +D+VSWN ++T     
Sbjct: 199 REVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLN 258

Query: 235 ------------------------------GFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
                                         G +QN    KA++    +Q +G KP+Q+  
Sbjct: 259 KECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITI 318

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
            + + A   L +L  GK++H Y  +  F  DL     L+ MYAKC  +    RVF  MT 
Sbjct: 319 TSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTK 378

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           +D +SW T+I   + +    +AL LFR +   G+  + +    VL  CS
Sbjct: 379 RDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCS 427



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 223/462 (48%), Gaps = 51/462 (11%)

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV- 157
            + +Y+   D ++AR LFD++  + D+  W  +ISA +  G+ LEA+  + + +    V 
Sbjct: 17  FIKVYSNSGDLQRARHLFDKI-PQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVE 75

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            +    ++  +AC           +H   ++ G    V + NALI MY +C + +E A +
Sbjct: 76  PDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKC-RCSEGARL 134

Query: 218 LYQ-LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           +++ +  +D +SW SM + +V   L  +A+  FR++   G++P+ V   + + A   L +
Sbjct: 135 VFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKD 194

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L +G+E+H + ++ G   ++ + + L++MYA C  +     VF  M+ +D +SW  +I  
Sbjct: 195 LKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITA 254

Query: 337 Y-----------------------------------AQNNCHLKALELFRTVQLEGLDAD 361
           Y                                    QN    KALE+   +Q  G   +
Sbjct: 255 YFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPN 314

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFE 420
            + I SVL AC+ L+ +   K+IHGYI R     DL    A+V +Y KCG+++ SR VF 
Sbjct: 315 QITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFS 374

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  +D VSW +MI +   +G   EAL LF  M ++ V  +S+T    LS  S   ++ +
Sbjct: 375 MMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDE 434

Query: 481 GKELNGFIIRKGFNLEGSVA------SSLVDMYARCGALDIA 516
                G +I    + + SV       S +VD+ +R G L+ A
Sbjct: 435 -----GLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEA 471



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 38/272 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAY--------------------------- 33
           MY  C S+  A+ +FD +S+R   +WN ++ AY                           
Sbjct: 223 MYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYAS 282

Query: 34  --------VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
                   + NG   + LE  SRM+  G   +  T   V+ AC  L+ L  G +IHG + 
Sbjct: 283 WNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIF 342

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
           +  +        +LV MYAKC D   +R++F  M  K D V WN++I A S  G   EAL
Sbjct: 343 RHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM-TKRDTVSWNTMIIATSMHGNGEEAL 401

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAM 204
            LFREM   G+  N+ TF   L  C  S     G+ I  +  +           + ++ +
Sbjct: 402 LLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDV 461

Query: 205 YARCGKMTEAAGVLYQLENKDSV-SWNSMLTG 235
            +R G++ EA   + ++  + +  +W ++L G
Sbjct: 462 LSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/796 (33%), Positives = 463/796 (58%), Gaps = 31/796 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM--GE 121
           ++ AC+ L +L  G +IH  +    ++    + N+L++MY+KC     A+Q FDR+    
Sbjct: 13  LVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRAS 72

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLG- 179
           K DVV WN++ISA+  +G   EAL LFR+M   G    N+ TFV+ L +C ++   +L  
Sbjct: 73  KRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLED 132

Query: 180 -MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS----VSWNSMLT 234
              IH   V +G   + +V  AL+  Y + G + +A  V  +  +++     V+ ++M++
Sbjct: 133 VRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMIS 192

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-- 292
              QN    ++++ F  +   G KP  V  V+ ++A     ++L      A+ ++Q    
Sbjct: 193 ACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNAC----SMLPVGSATAFVLEQAMEV 248

Query: 293 ---VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
                D  +G TL+  YA+   ++     F  + + D +SW  + A Y Q++   +AL L
Sbjct: 249 VSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVL 308

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQT---KEIHGYIIRKGLS-DLVILNAIVDV 405
           F  + LEG+   V    + L AC+     + +   K I   +   GL  D  + NA +++
Sbjct: 309 FERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNM 368

Query: 406 YGKCGNIDYSRNVFESIES--KDVVSWTSMISSYVHNGLANEALELFYLMN-EANVESDS 462
           Y KCG++  +R VFE I    +D ++W SM+++Y H+GL  EA ELF  M  E  V+ + 
Sbjct: 369 YAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNK 428

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN- 521
           +T V+ L A++S + + +G+E++  ++  GF  +  + ++L++MYA+CG+LD A  +F+ 
Sbjct: 429 VTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDK 488

Query: 522 -CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
                +D+I WTS++     +G+ + A+ LF+ M+ +   P+HITF++ L AC+H G + 
Sbjct: 489 SSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLE 548

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLG 639
           +G + L  M  D+ + P  +H++C+VDLLGR   L+EA + + R+ Q +     W ALL 
Sbjct: 549 QGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVI--TWMALLD 606

Query: 640 ACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           AC+     E GE  A+++++LDP    +Y+++++++AA+ +W +   +R  M   G++  
Sbjct: 607 ACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRAD 666

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG S +E+  ++HSF A DKSH +S+EIY +L  +   + +  GYVA T  VLH+V +E 
Sbjct: 667 PGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSI-KAAGYVADTGLVLHDVSQEH 725

Query: 760 KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDAN 819
           K ++L  HSE+LAIA+G++ +  GS +R+ KNLRVC DCH+  KL+S++ GR++++RD++
Sbjct: 726 KERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSS 785

Query: 820 RFHHFEAGVCSCGDYW 835
           R+HHF +G CSCGDYW
Sbjct: 786 RYHHFTSGTCSCGDYW 801



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 183/621 (29%), Positives = 310/621 (49%), Gaps = 45/621 (7%)

Query: 1   MYGKCGSVLDAEQLFDKV---SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGI-SV 56
           MY KCGS++DA+Q FD++   S+R V TWNAM+ A++ NG     L+ +  M   G    
Sbjct: 51  MYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPP 110

Query: 57  DAFTFPCVIKAC--AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
           ++ TF  V+ +C  A L  L+    IHG ++  G +   F+  +LV  Y K      A +
Sbjct: 111 NSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWE 170

Query: 115 LFDRMGEKE---DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           +F R  ++E    +V  +++ISA   +G   E+L LF  M   G   +  T V+ L AC 
Sbjct: 171 VFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNAC- 229

Query: 172 DSSFETLG----------MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
             S   +G          ME+ +AT  +       +   L+  YAR   ++ A      +
Sbjct: 230 --SMLPVGSATAFVLEQAMEVVSATRDN------VLGTTLLTTYARSNDLSRARATFDAI 281

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-- 279
           ++ D VSWN+M   ++Q+    +A+  F  +   G +P     + A++A           
Sbjct: 282 QSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASA 341

Query: 280 -GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--TAQDFISWTTIIAG 336
            GK + +   + G   D  + N  ++MYAKC  +     VF ++  T +D I+W +++A 
Sbjct: 342 IGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAA 401

Query: 337 YAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-S 394
           Y  +    +A ELF+ ++ E L   + +   +VL A +    ++Q +EIH  ++  G  S
Sbjct: 402 YGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFES 461

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIES--KDVVSWTSMISSYVHNGLANEALELFYL 452
           D VI NA++++Y KCG++D ++ +F+   S  +DV++WTS+++ Y   G A  AL+LF+ 
Sbjct: 462 DTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWT 521

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCG 511
           M +  V  + IT +SAL+A +    L++G E L+G     G        S +VD+  RCG
Sbjct: 522 MQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCG 581

Query: 512 ALDIANKVFNCVQTKDLILWTSMINA---NGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
            LD A K+       D+I W ++++A   +    RG+   +   +++ E  A  +I  LA
Sbjct: 582 RLDEAEKLLERTSQADVITWMALLDACKNSKELERGERCAERIMQLDPE-VASSYI-VLA 639

Query: 569 LLYACSHSGLINEGKKFLEIM 589
            +YA   +G  NE     + M
Sbjct: 640 SMYAA--AGRWNEAATIRKTM 658



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 170/333 (51%), Gaps = 20/333 (6%)

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +P+    +  V+A   LGNL  G+ +H+    + F  +  +GN L+ MY+KC  +    +
Sbjct: 4   RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 63

Query: 318 VFYQM---TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMAC- 372
            F ++   + +D ++W  +I+ + +N    +AL+LFR +  +G    + +   SVL +C 
Sbjct: 64  AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCV 123

Query: 373 -SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF----ESIESKD 426
            +GL  +   + IHG I+  G+  +  +  A+VD YGK G++D +  VF    +   S  
Sbjct: 124 EAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTS 183

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
           +V+ ++MIS+   NG   E+L LFY MN    +   +TLVS L+A S L +         
Sbjct: 184 LVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPV----GSATA 239

Query: 487 FIIRKGFNL-----EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           F++ +   +     +  + ++L+  YAR   L  A   F+ +Q+ D++ W +M  A   H
Sbjct: 240 FVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQH 299

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            R + A+ LF +M  E   P   TF+  L AC+
Sbjct: 300 HRPREALVLFERMLLEGVRPSVATFITALTACA 332


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/749 (36%), Positives = 423/749 (56%), Gaps = 13/749 (1%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           ++ +SLV MY +C     A  +F ++  K  +VLW  +ISAY + G    A+ LF  + +
Sbjct: 63  YLASSLVYMYLRCGSLESAIDVFHKIAHKS-IVLWTVLISAYVSRGHSAAAIALFHRILQ 121

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G+  +A  FV+ L AC    F   G  IH   V++G  LQ  VA+AL++MY RCG + +
Sbjct: 122 EGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRD 181

Query: 214 AAGVLYQLENK-DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
           A  +   LE   D V WN+M+T   QN    +A++ F  +   G  PD V  V+   A  
Sbjct: 182 ANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACS 241

Query: 273 RLGNLLNG--KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
              +L     K  H    + G  SD+ +   L++ YA+C  ++     F  M  ++ +SW
Sbjct: 242 SSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSW 301

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
           T++IA +AQ   HL A+E F  + LEG+      + + L  C  L      + I   I  
Sbjct: 302 TSMIAAFAQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVEAIAQEI-- 358

Query: 391 KGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK--DVVSWTSMISSYVHNGLANEAL 447
            G+ +D+ I+  +V  Y +C   + +  VF + E    D    T+MI+ Y          
Sbjct: 359 -GVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTF 417

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDM 506
           +L+    E  +  D I  ++AL A +SL+ L +G++++  +   +  + + ++ +++V M
Sbjct: 418 KLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSM 477

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y +CG+L  A   F+ +  +D I W +M++A+  HGR +   DLF  M  E F  + + F
Sbjct: 478 YGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAF 537

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           L LL AC+H+GL+  G +    M  D+ + P  EHY C+VDLLGR   L +A+  V++M 
Sbjct: 538 LNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMP 597

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           + P A  W AL+GACR++ + E G   A+++LEL   +   YV + N+++A+ +W+D   
Sbjct: 598 VPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAA 657

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR  M   GL+K PG S IEI +K+H F+ RD+SH +S+ IY +L  +   +ER  GY A
Sbjct: 658 VRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIER-AGYRA 716

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
            T  VLH+VEEE+K Q+L  HSE+LAIA+G++ + +GS +R+ KNLRVCVDCH+  K +S
Sbjct: 717 VTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFIS 776

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++FGRE+VVRD  RFHHF+ G CSCGDYW
Sbjct: 777 KVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 167/613 (27%), Positives = 298/613 (48%), Gaps = 26/613 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGS+  A  +F K++ +++  W  ++ AYVS G     +  + R+   GI++DA  
Sbjct: 71  MYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIV 130

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC+  + L  G  IH   ++ G    + + ++LV+MY +C   R A  LF  + 
Sbjct: 131 FVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLE 190

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS-SFETLG 179
              DVVLWN++I+A S +G   EAL +F  M ++G+  +  TFV+  +AC  S S     
Sbjct: 191 RHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQ 250

Query: 180 ME-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           ++  H    ++G    V VA AL+  YARCG++  A      +  +++VSW SM+  F Q
Sbjct: 251 VKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQ 310

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
              +  A++ F  +   G  P +     A+       +L   + + A A + G  +D+ I
Sbjct: 311 IG-HLLAVETFHAMLLEGVVPTRSTLFAALEGC---EDLHTARLVEAIAQEIGVATDVAI 366

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW-----TTIIAGYAQNNCHLKALELFRTV 353
              L+  YA+C       RVF   +A++   W     T +IA YAQ        +L+   
Sbjct: 367 VTDLVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAA 423

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKCGN 411
              G+  D ++  + L AC+ L  +S+ ++IH  +   R+   D+ + NAIV +YG+CG+
Sbjct: 424 IERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGS 483

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           +  +R+ F+ + ++D +SW +M+S+   +G   +  +LF  M +   +++ +  ++ LSA
Sbjct: 484 LRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSA 543

Query: 472 ASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLI 529
            +   +++ G E  +      G          +VD+  R G L  A+ +   +    D  
Sbjct: 544 CAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAA 603

Query: 530 LWTSMINANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
            W +++ A  ++G   RG+ A +   ++ A   A     ++AL    S +G   +     
Sbjct: 604 TWMALMGACRIYGDTERGRFAAERVLELRANHTA----AYVALCNIYSAAGRWEDAAAVR 659

Query: 587 EIMRCDYQLDPWP 599
           +IM  D  L   P
Sbjct: 660 KIM-ADLGLRKIP 671



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 157/304 (51%), Gaps = 8/304 (2%)

Query: 276 NLLNGKELHAYAIKQGFVS-DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           ++  GK LH+       +S D  + ++L+ MY +C  +     VF+++  +  + WT +I
Sbjct: 41  SIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLI 100

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           + Y        A+ LF  +  EG+  D ++  SVL ACS  + ++  + IH   +  GL 
Sbjct: 101 SAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLG 160

Query: 395 -DLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYL 452
              ++ +A+V +YG+CG++  +  +F  +E   DVV W +MI++   NG   EALE+FY 
Sbjct: 161 LQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYR 220

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGF---IIRKGFNLEGSVASSLVDMYAR 509
           M +  +  D +T VS   A SS   L +  ++ GF   +   G   +  VA++LV+ YAR
Sbjct: 221 MLQLGIPPDLVTFVSVFKACSSSPSL-RASQVKGFHTCLDETGLGSDVVVATALVNAYAR 279

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CG +D A + F  +  ++ + WTSMI A    G   +A++ F+ M  E   P   T  A 
Sbjct: 280 CGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGH-LLAVETFHAMLLEGVVPTRSTLFAA 338

Query: 570 LYAC 573
           L  C
Sbjct: 339 LEGC 342



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 111/183 (60%), Gaps = 1/183 (0%)

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           D  + +++V +Y +CG+++ + +VF  I  K +V WT +IS+YV  G +  A+ LF+ + 
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
           +  +  D+I  VS LSA SS   L  G+ ++   +  G  L+  VAS+LV MY RCG+L 
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180

Query: 515 IANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
            AN +F  ++   D++LW +MI AN  +G  + A+++FY+M      PD +TF+++  AC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240

Query: 574 SHS 576
           S S
Sbjct: 241 SSS 243


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 281/768 (36%), Positives = 448/768 (58%), Gaps = 47/768 (6%)

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
           K R+ +      +D   WNS+I A +A+     AL  F  MQ   + +N +TF A L+AC
Sbjct: 4   KTRRWYHCSISHKDTFHWNSLI-AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKAC 62

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK--DSVS 228
                    +++HA   + G     + A AL+  Y +CG    AA V  ++     D VS
Sbjct: 63  AALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVS 122

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGA-GQKPDQVCTVNAVS--------ASGRLGNLLN 279
           W ++++ +  N    +A + F  ++   G    + C V+ VS        A G   N L 
Sbjct: 123 WTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLR 182

Query: 280 -GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF--YQMTAQDFISWTTIIAG 336
            G  +H   +K GF     +GN+++ MY+ C  V    RVF    +  +D +SW ++I+G
Sbjct: 183 RGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISG 242

Query: 337 YAQNNCHLKALELFRTVQLEGLDA---DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           +  N    +AL  F  +  EG  A   + + + ++L +C+ L C+  +  +H YI  +  
Sbjct: 243 FTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHS 302

Query: 394 S-----DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           S     D+V+L A++D++ +CGN+  +R +F+ +E K+VV W++MI+ Y       EAL 
Sbjct: 303 SLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALR 362

Query: 449 LF-YLMNEAN-----VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
           LF  ++ E N     V+ +++TLVS ++A S L   +    ++ + +  G + +  +AS+
Sbjct: 363 LFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASA 422

Query: 503 LVDMYARCGALDIANKVFNCV--QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           L+DM A+CG ++   +VF+ +   T+ ++ W+SMI A G+HG GK A++LF +M    + 
Sbjct: 423 LIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYE 482

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
           P+ IT++++L ACSH+GL+ +GK     M  DY + P  +HYACLVDLLGRA HL+EA+ 
Sbjct: 483 PNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHN 542

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
            + +M I+    +W +LL AC +H N +LGEIV KK+L LD  + G++VL++N++  + +
Sbjct: 543 VILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGR 602

Query: 681 WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
           W DV ++R+ +R SGL+K PG S+IEIGN+++SF+A D+SH ES+ IYK+L  + E++ +
Sbjct: 603 WDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRK 662

Query: 741 EGGYVAQTQFVLHNVEEEEKVQMLYG---HSERLAIAYGVL----KST------EGSLIR 787
              YV +T     NVE+ +   ++     HSERLAIA+G++     ST        + IR
Sbjct: 663 AAKYVTETGL---NVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIR 719

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ITKNLRVC DCH++ KLVS++  REL+VRDA+RFHHF  G CSCGDYW
Sbjct: 720 ITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 177/587 (30%), Positives = 291/587 (49%), Gaps = 35/587 (5%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCG 77
           +S +  F WN+++ A  +   P   L  ++RM+   +  + FTFP ++KACA L+ L   
Sbjct: 13  ISHKDTFHWNSLI-AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-DVVLWNSIISAYS 136
            ++H  + + G  +  F   +LV  Y KC     A Q+FD M E   DVV W ++ISAYS
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 137 ASG---QCLEALGLFREMQ--------RVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           ++G   +  +A G  R M+         V +V+      A    C  +     G  +H  
Sbjct: 132 SNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRR-GSAVHGL 190

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQNDLYC 243
            VK G  +  ++ N+++ MY+ C  +  A  V     +E +D VSWNS+++GF  N    
Sbjct: 191 VVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAE 250

Query: 244 KAMQFFRELQGAGQ---KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG----FVSDL 296
           +A++ F ++   G    +P++V  +  + +   LG +     +H Y   +        D+
Sbjct: 251 RALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDV 310

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +   L+DM+A+C  +     +F  +  ++ + W+ +IAGY Q +C  +AL LFR + +E
Sbjct: 311 VVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLME 370

Query: 357 G------LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKC 409
           G      +  + + + SV+ ACS L        IH Y +  GL  D  I +A++D+  KC
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 410 GNIDYSRNVFESIE--SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           G+I++ R VF  ++  ++ VVSW+SMI +   +G    ALELF  M     E + IT +S
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYIS 490

Query: 468 ALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQT 525
            LSA S   ++++GK   N      G +  G   + LVD+  R G LD A N + N    
Sbjct: 491 VLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIK 550

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYK-MEAESFAPDHITFLALLY 571
            DL LW S++ A  LHG  K+   +  K +  +S +  H   LA +Y
Sbjct: 551 ADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMY 597



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 240/466 (51%), Gaps = 31/466 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRT--VFTWNAMLGAYVSNGEPLRVLETYSRMRVLG------ 53
           YGKCG    A Q+FD++ + +  V +W A++ AY SNG      + + RMR +       
Sbjct: 97  YGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSE 156

Query: 54  -ISVDAFTFPCVIKACAMLKDLDC---GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDF 109
              VD  +   ++ ACA+    +C   G+ +HGLV+K G+  +  + NS+V MY+ C D 
Sbjct: 157 CCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDV 216

Query: 110 RKARQLFDRMG-EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG---LVTNAYTFVA 165
             A ++F+ +  E+ DVV WNS+IS ++ +G+   AL  F +M   G   +  N  T +A
Sbjct: 217 GGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIA 276

Query: 166 ALQACEDSSFETLGMEIHAATVKSGQNL----QVYVANALIAMYARCGKMTEAAGVLYQL 221
            L++C +         +H        +L     V V  AL+ M+ARCG +  A  +   +
Sbjct: 277 LLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGV 336

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ------KPDQVCTVNAVSASGRLG 275
           E K+ V W++M+ G+ Q     +A++ FR++   G       KP+ V  V+ ++A  RLG
Sbjct: 337 EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLG 396

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--TAQDFISWTTI 333
              +   +H YA+  G   D +I + L+DM AKC  + +  +VF +M  + +  +SW+++
Sbjct: 397 ASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSM 456

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-G 392
           I     +    +ALELF  ++  G + + +   SVL ACS    + Q K     + +  G
Sbjct: 457 IGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYG 516

Query: 393 LSDLVILNA-IVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           +S      A +VD+ G+ G++D + NV  ++  K D+  W S++++
Sbjct: 517 MSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAA 562



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 113/247 (45%), Gaps = 19/247 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM----RVLGISV 56
           M+ +CG++  A ++FD V  + V  W+AM+  Y     P   L  + +M     ++G+ V
Sbjct: 319 MHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEV 378

Query: 57  --DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
             +A T   VI AC+ L      + IH   +  G D    I ++L+ M AKC D    RQ
Sbjct: 379 KPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQ 438

Query: 115 LFDRMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           +F  M E    VV W+S+I A    G+   AL LF EM+  G   N  T+++ L AC  +
Sbjct: 439 VFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHA 498

Query: 174 SFETLG------MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DS 226
                G      ME       +G++        L+ +  R G + EA  V+  +  K D 
Sbjct: 499 GLVEQGKSCFNSMEKDYGMSPTGKHYA-----CLVDLLGRAGHLDEAHNVILNMPIKADL 553

Query: 227 VSWNSML 233
             W S+L
Sbjct: 554 ALWGSLL 560


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 277/797 (34%), Positives = 459/797 (57%), Gaps = 19/797 (2%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRK 111
            +  +  T+  +++ CA  + L  G KIH L +K      + I+ N +V+MYA C     
Sbjct: 38  AVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGD 97

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A+  FD + E+ ++  W  +++A++ SGQ  E L     M++ G+  +A TF+ AL +C 
Sbjct: 98  AKAAFDAL-EQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCG 156

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWN 230
           D      G+ IH   V S   +   V+NAL+ MY +CG ++ A  V  ++E  ++ +SW+
Sbjct: 157 DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWS 216

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
            M      +    +A++ FR +   G K  +   V  +SA      + +G+ +H+     
Sbjct: 217 IMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALS 276

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--TAQDFISWTTIIAGYAQNNCHLKALE 348
           GF S+L + N +M MY +C  V    +VF  M    +D +SW  +++ Y  N+    A++
Sbjct: 277 GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQ 336

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYG 407
           L++ +QL    AD +   S+L ACS  + +   + +H  I+   L   VI+ NA+V +Y 
Sbjct: 337 LYQRMQLR---ADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA 393

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE-------ANVES 460
           KCG+   +R VF+ +E + ++SWT++IS+YV   L  EA  LF  M E         V+ 
Sbjct: 394 KCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 453

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D++  V+ L+A + +S L++GK ++      G + + +V +++V++Y +CG ++   ++F
Sbjct: 454 DALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIF 513

Query: 521 NCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           + V ++ D+ LW +MI      G+   A+ LF++ME E   PD  +F+++L ACSH+GL 
Sbjct: 514 DGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLE 573

Query: 580 NEGKKFLEIMRCDYQ-LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           ++GK +   M  +Y+ +    +H+ C+ DLLGR   L+EA +F+  + ++P A  W +LL
Sbjct: 574 DQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 633

Query: 639 GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
            ACR H + +  + VA KLL L+P     YV +SN++A  +KW  V +VR  M   G+KK
Sbjct: 634 AACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKK 693

Query: 699 TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
             G S IEIG  +H F   D +H  + EI ++LA++  ++ +E GYV  T+ VLH V+E+
Sbjct: 694 ERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQM-KECGYVPDTKMVLHFVDEQ 752

Query: 759 EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
           EK ++L+ HSERLAIA G++ +  G+ +R+TKNLRVC DCH+  KL+S++ GR++VVRD 
Sbjct: 753 EKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDP 812

Query: 819 NRFHHFEAGVCSCGDYW 835
            RFH F+ G CSC DYW
Sbjct: 813 TRFHLFKDGKCSCQDYW 829



 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 175/568 (30%), Positives = 284/568 (50%), Gaps = 17/568 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C S  DA+  FD + QR +++W  ++ A+  +G+    L    RMR  G+  DA T
Sbjct: 88  MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   + +C   + L  G +IH +V+    +    + N+L+ MY KC     A+++F +M 
Sbjct: 148 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 207

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              +V+ W+ +  A++  G   EAL  FR M  +G+       V  L AC   +    G 
Sbjct: 208 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 267

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN--KDSVSWNSMLTGFVQ 238
            IH+    SG   ++ VANA++ MY RCG + EA  V   ++   +D VSWN ML+ +V 
Sbjct: 268 LIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVH 327

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           ND    A+Q ++ +Q    + D+V  V+ +SA     ++  G+ LH   +      ++ +
Sbjct: 328 NDRGKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 384

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN-----CHL--KALELFR 351
           GN L+ MYAKC        VF +M  +  ISWTTII+ Y +       CHL  + LEL +
Sbjct: 385 GNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEK 444

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
               + +  D +   ++L AC+ +  + Q K +       GL SD  +  A+V++YGKCG
Sbjct: 445 NGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCG 504

Query: 411 NIDYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
            I+  R +F+ + S+ DV  W +MI+ Y   G ++EAL+LF+ M    V  DS + VS L
Sbjct: 505 EIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSIL 564

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK- 526
            A S   +  +GK     +  +  N+  ++     + D+  R G L  A +    +  K 
Sbjct: 565 LACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKP 624

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKM 554
           D + WTS++ A   H   K A ++  K+
Sbjct: 625 DAVAWTSLLAACRNHRDLKRAKEVANKL 652


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 261/761 (34%), Positives = 427/761 (56%), Gaps = 8/761 (1%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           A+ H  ++  G+ +   ++  L    +       AR +F  + ++ DV L+N ++  +S 
Sbjct: 37  AQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV-QRPDVFLFNVLMRGFSV 95

Query: 138 SGQCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
           +     +L +F  +++   L  N+ T+  A+ A      +  G  IH   +  G + ++ 
Sbjct: 96  NESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELL 155

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           + + ++ MY +  ++ +A  V  ++  KD++ WN+M++G+ +N++Y +++Q FR+L    
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215

Query: 257 -QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
             + D    ++ + A   L  L  G ++H+ A K G  S   +    + +Y+KC  +   
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMA 275

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
             +F +    D +++  +I GY  N     +L LF+ + L G       + S++     L
Sbjct: 276 STLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHL 335

Query: 376 KCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
             +     IHGY ++   LS   +  A+  VY K   I+ +R +F+    K + SW +MI
Sbjct: 336 MLIYA---IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           S Y  NGL  +A+ LF  M  +    + +T+   LSA + L  L  GK ++  +    F 
Sbjct: 393 SGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
               V+++L+ MYA+CG++  A ++F+ +  K+ + W +MI+  GLHG G+ A+ +F +M
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEM 512

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
                AP  +TFL +LYACSH+GL+ EG +    M   Y  +P  +HYAC+VD+LGRA H
Sbjct: 513 LNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGH 572

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNV 674
           L+ A QF+ +M I+P   VW  LLGACR+H +  L   V++KL ELDP N G +VL+SN+
Sbjct: 573 LQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNI 632

Query: 675 FAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
            +A R +     VR   +   L K PG + IEIG   H F + D+SH +   I++KL ++
Sbjct: 633 HSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKL 692

Query: 735 TEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRV 794
             K+ RE GY  +T+  LH+VEEEE+  M+  HSERLAIA+G++ +  G+ IRI KNLRV
Sbjct: 693 EGKM-REAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRV 751

Query: 795 CVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           C+DCH+  KL+S++  R +VVRDANRFHHF+ GVCSCGDYW
Sbjct: 752 CLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 279/570 (48%), Gaps = 11/570 (1%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAFTFPCV 64
           G++  A  +F  V +  VF +N ++  +  N  P   L  ++ +R    +  ++ T+   
Sbjct: 66  GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFA 125

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           I A +  +D   G  IHG  +  G DS   + +++V MY K +    AR++FDRM EK D
Sbjct: 126 ISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK-D 184

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGMEIH 183
            +LWN++IS Y  +   +E++ +FR++        +  T +  L A  +     LGM+IH
Sbjct: 185 TILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIH 244

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           +   K+G     YV    I++Y++CGK+  A+ +  +    D V++N+M+ G+  N    
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETE 304

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
            ++  F+EL  +G K      V+ V  SG L  +     +H Y++K  F+S   +   L 
Sbjct: 305 LSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIY---AIHGYSLKSNFLSHTSVSTALT 361

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
            +Y+K   +    ++F +   +   SW  +I+GY QN     A+ LFR +Q      + +
Sbjct: 362 TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPV 421

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            I  +L AC+ L  +S  K +H  +      S + +  A++ +Y KCG+I  +R +F+ +
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFM 481

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             K+ V+W +MIS Y  +G   EAL +F  M  + +    +T +  L A S   ++K+G 
Sbjct: 482 PKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGD 541

Query: 483 EL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMINANGL 540
           E+ N  I R GF       + +VD+  R G L  A +    +  +    +W +++ A  +
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRI 601

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           H    +A  +  K+      PD++ +  LL
Sbjct: 602 HKDTNLARTVSEKL--FELDPDNVGYHVLL 629



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 227/465 (48%), Gaps = 11/465 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS-VDAF 59
           MY K   V DA ++FD++ ++    WN M+  Y  N   +  ++ +  +     + +D  
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++ A A L++L  G +IH L  K G  S D+++   +++Y+KC   + A  LF R 
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLF-RE 281

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + D+V +N++I  Y+++G+   +L LF+E+   G    + T V+ +     S    L 
Sbjct: 282 FRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPV---SGHLMLI 338

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH  ++KS       V+ AL  +Y++  ++  A  +  +   K   SWN+M++G+ QN
Sbjct: 339 YAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN 398

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L   A+  FRE+Q +   P+ V     +SA  +LG L  GK +H       F S + + 
Sbjct: 399 GLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVS 458

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+ MYAKC  +    R+F  M  ++ ++W T+I+GY  +    +AL +F  +   G+ 
Sbjct: 459 TALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIA 518

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYII-RKGLSDLVILNA-IVDVYGKCGNIDYSRN 417
              +    VL ACS    + +  EI   +I R G    V   A +VD+ G+ G++  +  
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQ 578

Query: 418 VFESIESKDVVS-WTSMISS-YVH--NGLANEALELFYLMNEANV 458
             E++  +   S W +++ +  +H    LA    E  + ++  NV
Sbjct: 579 FIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNV 623


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 253/688 (36%), Positives = 406/688 (59%), Gaps = 3/688 (0%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D      ++K C   K L  G  IH  ++  G  +   +  SL+ +Y  C+ F+ A+ +
Sbjct: 1   MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLF-REMQRVGLVTNAYTFVAALQACEDSS 174
           F  +    D+ LWN +++A + +   +E L +F R +    L  +A+T+ + L+AC    
Sbjct: 61  FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  +H   +KSG  + V V ++ + MYA+C    +A  +  ++  +D  SWN++++
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            + Q+    KA++ F E++ +G KPD V     +S+  RL +L  GKE+H   ++ GF  
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D  + + L+DMY KC C+     VF Q+  ++ +SW ++IAGY+        +ELFR + 
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMD 300

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
            EG+   +  + S+LMACS    +   K IHGYIIR  + +D+ + ++++D+Y KCGNI 
Sbjct: 301 EEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIG 360

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            + NVF+++   +VVSW  MIS YV  G   EAL +F  M +A V+ D+IT  S L A S
Sbjct: 361 SAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACS 420

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            L++L+KGKE++ FII     +   V  +L+DMYA+CGA+D A  +FN +  +D + WTS
Sbjct: 421 QLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTS 480

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           MI A G HG+   A+ LF KM+     PD +TFLA+L ACSH+GL++EG  +   M  +Y
Sbjct: 481 MIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEY 540

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGEI 652
              P  EHY+CL+DLLGR   L EAY+ + R+  I     +   L  AC +H   +LGE 
Sbjct: 541 GFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQ 600

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
           + + L+E DP +P  Y+++SN++A+ +KW +V +VR++++  GLKK PG SWIE+G +IH
Sbjct: 601 IGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIH 660

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLER 740
            F+  DKSH ++D IY+ ++ +   +E+
Sbjct: 661 PFVVEDKSHPQADMIYECMSILASHVEK 688



 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 181/549 (32%), Positives = 291/549 (53%), Gaps = 7/549 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFT-WNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDA 58
           +Y  C     A+ +F  +      T WN ++ A   N   +  LE + R+     +  DA
Sbjct: 47  LYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDA 106

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           FT+P V+KAC+ L  +  G  +H  V+K G+     +++S V MYAKC  F  A +LFD 
Sbjct: 107 FTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDE 166

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M E+ DV  WN++IS Y   GQ  +AL LF EM+  G   ++ T    + +C        
Sbjct: 167 MPER-DVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLER 225

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G EIH   V+SG  L  +V++AL+ MY +CG +  A  V  Q++ K+ VSWNSM+ G+  
Sbjct: 226 GKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSL 285

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                  ++ FR +   G +P      + + A  R  NL  GK +H Y I+    +D+ +
Sbjct: 286 KGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFV 345

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            ++L+D+Y KC  +     VF  M   + +SW  +I+GY +   +L+AL +F  ++  G+
Sbjct: 346 NSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGV 405

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D +   SVL ACS L  + + KEIH +II   L  + V++ A++D+Y KCG +D + +
Sbjct: 406 KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALH 465

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  +  +D VSWTSMI++Y  +G A EAL+LF  M +++ + D +T ++ LSA S   +
Sbjct: 466 IFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGL 525

Query: 478 LKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT--KDLILWTSM 534
           + +G    N  I   GF       S L+D+  R G L  A ++        +D+ L +++
Sbjct: 526 VDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTL 585

Query: 535 INANGLHGR 543
            +A  LH +
Sbjct: 586 FSACHLHKK 594


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 249/675 (36%), Positives = 404/675 (59%), Gaps = 6/675 (0%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L+ C  +     G+++HAA V  G    + + N LI MY +C ++  A  V  ++  ++ 
Sbjct: 11  LRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNV 70

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           VSW +++ G++Q      ++    E+  +G KP++     ++ A G LG + NG ++H  
Sbjct: 71  VSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGM 130

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            +K GF     +GN  +DMY+KC  +    +VF +M  ++ +SW  +IAG+       K+
Sbjct: 131 CVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKS 190

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS---DLVILNAIV 403
           L LF+ +Q +G   D     S L AC  L  +    +IH  +I +G       +I +AIV
Sbjct: 191 LVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIV 250

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y KCG +  ++ VF+ IE K+++SW+++I  +   G   EA++LF  + E+    D  
Sbjct: 251 DLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGF 310

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
            L   +   + L+++++GK+++ +I++    L+ SVA+S++DMY +CG  + A ++F+ +
Sbjct: 311 VLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEM 370

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           Q ++++ WT MI   G HG G+ AI LF +M+ +    D + +LALL ACSHSGLI E +
Sbjct: 371 QVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQ 430

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRV 643
           ++   +  ++Q+ P  EHYAC+VD+LGRA  L+EA   + +M+++P   +W  LL ACRV
Sbjct: 431 EYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRV 490

Query: 644 HSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
           H N E+G  V + L  +D  NP NYV++SN++A +  WK+ E+VR  ++  GLKK  G S
Sbjct: 491 HGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQS 550

Query: 704 WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
           W+EI  +IH F   D +H  +++I++ L E+  +++ E GY    +F LH+VEEE K + 
Sbjct: 551 WVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEEN 610

Query: 764 LYGHSERLAIAYGVL---KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANR 820
           L  HSE+LAI   ++      +G +IR+ KNLRVC DCH F K +S++  +  VVRDANR
Sbjct: 611 LRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANR 670

Query: 821 FHHFEAGVCSCGDYW 835
           FH FE G+CSCGDYW
Sbjct: 671 FHRFEDGLCSCGDYW 685



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 280/522 (53%), Gaps = 21/522 (4%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++ C+     D G ++H   +  G+     + N L+ MY KC     A  +FDRM E+ 
Sbjct: 10  LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLER- 68

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +VV W +++  Y   G    +L L  EM   G+  N +TF  +L+AC        GM+IH
Sbjct: 69  NVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIH 128

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              VKSG      V NA I MY++CG++  A  V  ++  ++ VSWN+M+ G        
Sbjct: 129 GMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGR 188

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ--IGNT 301
           K++  F+ +QG G+ PD+    + + A G LG +  G ++HA  I +GF   ++  I + 
Sbjct: 189 KSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASA 248

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++D+YAKC  +    +VF ++  ++ ISW+ +I G+AQ    L+A++LFR ++    + D
Sbjct: 249 IVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVD 308

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
             ++  ++   + L  + Q K++H YI++   GL D+ + N+I+D+Y KCG  + +  +F
Sbjct: 309 GFVLSIMMGVFADLALVEQGKQMHCYILKVPSGL-DISVANSIIDMYLKCGLTEEAERLF 367

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             ++ ++VVSWT MI+ Y  +GL  +A+ LF  M    +E D +  ++ LSA S   +++
Sbjct: 368 SEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIR 427

Query: 480 KGKEL-----NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
           + +E      N   ++   N+E    + +VD+  R G L  A  +   ++ K +  +W +
Sbjct: 428 ESQEYFSRLCNNHQMKP--NIEHY--ACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQT 483

Query: 534 MINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +++A  +HG    G+   ++ ++M+ ++  P +   ++ +YA
Sbjct: 484 LLSACRVHGNLEIGREVGEILFRMDTDN--PVNYVMMSNIYA 523



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 250/465 (53%), Gaps = 9/465 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC  V  A  +FD++ +R V +W A++  Y+  G     L     M   G+  + FT
Sbjct: 48  MYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFT 107

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +KAC  L  ++ G +IHG+ +K G++    + N+ + MY+KC     A Q+F++M 
Sbjct: 108 FSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMP 167

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + ++V WN++I+ ++  G   ++L LF+ MQ  G V + +TF + L+AC        G 
Sbjct: 168 FR-NLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGT 226

Query: 181 EIHAATVKSGQNLQV--YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IHA+ +  G  + +   +A+A++ +YA+CG + EA  V  ++E K+ +SW++++ GF Q
Sbjct: 227 QIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQ 286

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                +AM  FR+L+ +    D       +     L  +  GK++H Y +K     D+ +
Sbjct: 287 EGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISV 346

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N+++DMY KC       R+F +M  ++ +SWT +I GY ++    KA+ LF  +QL+G+
Sbjct: 347 ANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGI 406

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKCGNIDYSR 416
           + D +   ++L ACS    + +++E    +    +   ++     +VD+ G+ G +  ++
Sbjct: 407 ELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAK 466

Query: 417 NVFESIESKDVVS-WTSMISS-YVHNGL--ANEALELFYLMNEAN 457
           N+ E+++ K     W +++S+  VH  L    E  E+ + M+  N
Sbjct: 467 NLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDN 511



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 59/123 (47%)

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
           S+   L   L   S   +  +G +++   +  GF  +  + + L+DMY +C  +D+A  V
Sbjct: 2   SERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSV 61

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F+ +  ++++ WT+++      G  K ++ L  +M      P+  TF   L AC   G++
Sbjct: 62  FDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVV 121

Query: 580 NEG 582
             G
Sbjct: 122 ENG 124


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/660 (38%), Positives = 414/660 (62%), Gaps = 7/660 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN---KDSVSWNSMLTGFV 237
           +IH   + +      ++ N LI +YA+CG + +A  +L+ + +   K  V+W S++T   
Sbjct: 163 QIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQAL-LLFSITHHHFKTIVTWTSLITHLS 221

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
             +++ +A+  F +++ +G  P+Q    + +SAS     +L+G++LH+   K GF +++ 
Sbjct: 222 HFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIF 281

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE- 356
           +G  L+DMYAKC  ++   RVF QM  ++ +SW ++I G+  NN + +A+ +F+ V  E 
Sbjct: 282 VGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREK 341

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYS 415
            +  + + + SVL AC+ +  ++  +++HG +++ GL  L  ++N+++D+Y KC   D  
Sbjct: 342 TVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEG 401

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             +F+ +  +DVV+W  ++  +V N    EA   F++M    +  D  +  + L +++SL
Sbjct: 402 VKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASL 461

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           + L +G  ++  II+ G+     +  SL+ MYA+CG+L  A +VF  ++  ++I WT+MI
Sbjct: 462 AALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMI 521

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           +A  LHG     I+LF  M +E   P H+TF+ +L ACSH+G + EG      M+  + +
Sbjct: 522 SAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDM 581

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           +P PEHYAC+VDLLGRA  L+EA +F+ SM ++PT  VW ALLGACR + N ++G   A+
Sbjct: 582 NPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAE 641

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           +L E++P NPGNYVL++N+   S + ++  +VR  M  +G++K PG SWI++ N    F 
Sbjct: 642 RLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFT 701

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
           A D+SHS SDEIY K+ E  EKL ++ GYVA+T+FV +++EE E+ Q L+ HSE+LA+A+
Sbjct: 702 AHDRSHSSSDEIY-KMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAF 760

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G+L     S IRI KNLR C  CH+  KL S++F RE++VRD NRFH F  G CSCGDYW
Sbjct: 761 GLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/526 (30%), Positives = 270/526 (51%), Gaps = 12/526 (2%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK-EDVVLWNS 130
           + L    +IH  ++   Y S  F+ N+L+ +YAKC    +A  LF       + +V W S
Sbjct: 156 RSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTS 215

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I+  S     L+AL LF +M+  G   N +TF + L A   +     G ++H+   K G
Sbjct: 216 LITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHG 275

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +  ++V  AL+ MYA+C  M  A  V  Q+  ++ VSWNSM+ GF  N+LY +A+  F+
Sbjct: 276 FDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFK 335

Query: 251 E-LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           + L+     P++V   + +SA   +G L  G+++H   +K G V    + N+LMDMY KC
Sbjct: 336 DVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKC 395

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
              +   ++F  +  +D ++W  ++ G+ QN+   +A   F  ++ EG+  D     +VL
Sbjct: 396 RFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVL 455

Query: 370 MACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            + + L  + Q   IH  II+ G + ++ IL +++ +Y KCG++  +  VFE IE  +V+
Sbjct: 456 HSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVI 515

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGF 487
           SWT+MIS+Y  +G AN+ +ELF  M    +E   +T V  LSA S    +++G    N  
Sbjct: 516 SWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSM 575

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR--- 543
                 N      + +VD+  R G LD A +    +  K    +W +++ A   +G    
Sbjct: 576 KKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKM 635

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           G+ A +  ++ME   + P +   LA +  C+ SG + E  +   +M
Sbjct: 636 GREAAERLFEMEP--YNPGNYVLLANM--CTRSGRLEEANEVRRLM 677



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 235/471 (49%), Gaps = 20/471 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQ--RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           +Y KCG +  A  LF       +T+ TW +++         L+ L  +++MR  G   + 
Sbjct: 186 LYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQ 245

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           FTF  ++ A A    +  G ++H L+ K G+D+  F+  +LV MYAKC D   A ++FD+
Sbjct: 246 FTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQ 305

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFET 177
           M E+ ++V WNS+I  +  +     A+G+F+++ R   ++ N  +  + L AC +     
Sbjct: 306 MPER-NLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLN 364

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G ++H   VK G     YV N+L+ MY +C    E   +   + ++D V+WN ++ GFV
Sbjct: 365 FGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFV 424

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QND + +A  +F  ++  G  PD+      + +S  L  L  G  +H   IK G+V ++ 
Sbjct: 425 QNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMC 484

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           I  +L+ MYAKC  +    +VF  +   + ISWT +I+ Y  + C  + +ELF  +  EG
Sbjct: 485 ILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEG 544

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
           ++   +    VL ACS       GL   +  K+IH   +  G      +   VD+ G+ G
Sbjct: 545 IEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHD--MNPGPEHYACM---VDLLGRAG 599

Query: 411 NIDYSRNVFESIESKDVVS-WTSMISS---YVHNGLANEALELFYLMNEAN 457
            +D ++   ES+  K   S W +++ +   Y +  +  EA E  + M   N
Sbjct: 600 WLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYN 650


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 266/780 (34%), Positives = 443/780 (56%), Gaps = 3/780 (0%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           + + +  ++++C    D   G  +H  ++K G     F  N L+  Y K      A +LF
Sbjct: 43  NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           D M ++ + V + ++I  YS   +  EA+GLF  +Q  G   N + F   L+    + + 
Sbjct: 103 DEMPDR-NTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWA 161

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            LG  +HA   K G +   +V  ALI  Y+ CG    A  V   +E KD VSW  M+  +
Sbjct: 162 KLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACY 221

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           V+N+ + ++++ F  ++  G KP+     + + A   L     GK +H  A K  ++ +L
Sbjct: 222 VENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEEL 281

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +G  L+D+Y K   V+   +VF +M   D I W+ +IA YAQ+    +A+E+F  ++  
Sbjct: 282 FVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRG 341

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
            +  +   + S+L AC+ L  +    +IH ++++ GL  ++ + NA++D+Y KCG ++ S
Sbjct: 342 LVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENS 401

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             +F    +   VSW ++I  YV  G   +AL LF  M E  V+   +T  S L A + +
Sbjct: 402 LQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGI 461

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           + L+ G +++   ++  ++    V ++L+DMYA+CG +  A  VF+ ++  D + W +MI
Sbjct: 462 AALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMI 521

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           +   +HG    A+  F  M      PD +TF+ +L ACS++GL++ G+ + + M  +Y +
Sbjct: 522 SGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDI 581

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           +P  EHY C+V LLGR+ HL++A + V  +  EP+  VW ALL AC +H++ ELG I A+
Sbjct: 582 EPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQ 641

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           ++LE++P +   +VL+SN++A +R+W +V  +R  M+  G++K PG SWIE   ++H F 
Sbjct: 642 RVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFS 701

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
             D SH ++  I   L  +  K   E GYV     VL +VE+ +K Q L+ HSERLA+AY
Sbjct: 702 VGDTSHPDTKLINGMLEWLNMKARNE-GYVPDFSSVLLDVEDVDKEQRLWVHSERLALAY 760

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G++++   S +RI KNLR+C DCH+  KL+S++  R++++RD NRFHHF  G+CSCGDYW
Sbjct: 761 GLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 297/582 (51%), Gaps = 17/582 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            Y K  S+ DA +LFD++  R   ++  ++  Y         +  +SR++  G  ++ F 
Sbjct: 88  FYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFV 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+K     +    G  +H  V K G+DS  F+  +L+  Y+ C     ARQ+FD + 
Sbjct: 148 FSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAI- 206

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E +D+V W  +++ Y  +    E+L LF  M+ VG   N +TF + L+AC       +G 
Sbjct: 207 EYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGK 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    K+    +++V   LI +Y + G + +A  V  ++   D + W+ M+  + Q++
Sbjct: 267 AVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSE 326

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ F  ++     P+Q    + + A   L +L  G ++H + +K G   ++ + N
Sbjct: 327 QSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSN 386

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV---QLEG 357
            LMDMYAKC  +    ++F +      +SW T+I GY Q     KAL LF+ +   Q++G
Sbjct: 387 ALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQG 446

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
            +   +   SVL AC+G+  +    +IH   ++     + V+ NA++D+Y KCGNI  +R
Sbjct: 447 TE---VTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDAR 503

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF+ +   D VSW +MIS Y  +GL  EAL+ F  M E   + D +T V  LSA S+  
Sbjct: 504 LVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAG 563

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTS 533
           +L +G+     ++ + +++E      + +V +  R G LD A K+ + +     +++W +
Sbjct: 564 LLDRGQAYFKSMVEE-YDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRA 622

Query: 534 MINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +++A  +H     G+++     ++E E  A  H+  L+ +YA
Sbjct: 623 LLSACVIHNDVELGRISAQRVLEIEPEDEAT-HV-LLSNIYA 662


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 290/812 (35%), Positives = 458/812 (56%), Gaps = 44/812 (5%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKAR 113
           +D    P  IK+ A L+D      IH   L+ G  +  +  + N+L+  YA+C     A 
Sbjct: 57  LDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAAL 116

Query: 114 QLFDRMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQRV----------GLVTNAYT 162
           ++F  + +   D V +NS+ISA          L LFR               G    ++T
Sbjct: 117 EVFGSISDSAHDAVSFNSLISA----------LCLFRRWDHALAALRAMLAGGHPLTSFT 166

Query: 163 FVAALQACED----SSFETLGMEIHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAG 216
            V+ L+A       ++   LG E HA  +K+G     Q +  NAL++MYAR G + +A  
Sbjct: 167 LVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQR 226

Query: 217 VLYQLE--NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
           +         D V+WN+M++  VQ+ ++ +A+Q   ++   G +PD V   +A+ A  RL
Sbjct: 227 LFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRL 286

Query: 275 GNLLNGKELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--TAQDFISWT 331
             L  G+E+HAY IK     ++  + + L+DMYA    V    +VF  +  + +    W 
Sbjct: 287 ELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWN 346

Query: 332 TIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
            +I GYAQ     +AL LF  ++ E G       + SVL AC+  +  +  + +HGY+++
Sbjct: 347 AMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVK 406

Query: 391 KGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
           +G++ +  + NA++D+Y + G  D +R +F  ++  DVVSW ++I+  V  G   +A +L
Sbjct: 407 RGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQL 466

Query: 450 FYLMN---EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
              M    E  V  ++ITL++ L   + L+   +GKE++G+ +R   + + +V S+LVDM
Sbjct: 467 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 526

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA-PDHIT 565
           YA+CG L ++  VF+ +  ++ I W  +I A G+HG G  A  LF +M A   A P+ +T
Sbjct: 527 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVT 586

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F+A L ACSHSG+++ G +    M  D+ ++P P+  AC+VD+LGRA  L+EAY  V SM
Sbjct: 587 FMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSM 646

Query: 626 QI-EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           +  E     W  +LGACR+H N  LGEI  ++LLEL+P    +YVL+ N+++A+ +W   
Sbjct: 647 ETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRA 706

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI-TEKLEREGG 743
            +VR RMR  G+ K PG SWIE+   IH F+A + +H  S+E++  +  +  E + R  G
Sbjct: 707 AEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVAR--G 764

Query: 744 YVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
           Y   T  VLH++++ +K  +L  HSE+LAIA+G+L++  G+ IR+ KNLRVC DCH   K
Sbjct: 765 YTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAK 824

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +S++ GRE+V+RD  RFHHF  G CSCGDYW
Sbjct: 825 FLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 223/454 (49%), Gaps = 23/454 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVS--QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY + G V DA++LF   +  +  V TWN M+   V +G     ++T   M  LG+  D 
Sbjct: 214 MYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 273

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            TF   + AC+ L+ LD G ++H  V+K     +  F+ ++LV MYA      KARQ+FD
Sbjct: 274 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 333

Query: 118 RMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSF 175
            + +  + + +WN++I  Y+ +G   EAL LF  M+   G V    T  + L AC  S  
Sbjct: 334 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 393

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                 +H   VK G     +V NAL+ MYAR GK   A  +   ++  D VSWN+++TG
Sbjct: 394 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 453

Query: 236 FVQNDLYCKAMQFFRELQG---AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
            V       A Q  RE+Q     G  P+ +  +  +     L     GKE+H YA++   
Sbjct: 454 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 513

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            +D+ +G+ L+DMYAKC C+     VF ++  ++ I+W  +I  Y  +    +A  LF  
Sbjct: 514 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 573

Query: 353 VQLEG-LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVD 404
           +   G    + +   + L ACS       GL+     +  HG    +   D  IL  +VD
Sbjct: 574 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGV---EPTPD--ILACVVD 628

Query: 405 VYGKCGNIDYSRNVFESIES--KDVVSWTSMISS 436
           + G+ G +D +  +  S+E+  + V +W++M+ +
Sbjct: 629 ILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGA 662


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 281/768 (36%), Positives = 447/768 (58%), Gaps = 47/768 (6%)

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
           K R+ +      +D   WNS+I A +A+     AL  F  MQ   + +N +TF A L+AC
Sbjct: 4   KTRRWYXCSISHKDTFHWNSLI-AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKAC 62

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK--DSVS 228
                    +++HA   + G     + A AL+  Y +CG    AA V  ++     D VS
Sbjct: 63  AALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVS 122

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGA-GQKPDQVCTVNAVS--------ASGRLGNLLN 279
           W ++++ +  N    +A   F  ++   G    + C V+ VS        A G   N L 
Sbjct: 123 WTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLR 182

Query: 280 -GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF--YQMTAQDFISWTTIIAG 336
            G  +H   +K GF     +GN+++ MY+ C  V    RVF    +  +D +SW ++I+G
Sbjct: 183 RGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISG 242

Query: 337 YAQNNCHLKALELFRTVQLEGLDA---DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           +  N    +AL  F  +  EG  A   + + + ++L +C+ L C+  +  +H YI  +  
Sbjct: 243 FXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHS 302

Query: 394 S-----DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           S     D+V+L A++D++ +CGN+  +R +F+ +E K+VV W++MI+ Y       EAL 
Sbjct: 303 SLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALR 362

Query: 449 LF-YLMNEAN-----VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
           LF  ++ E N     V+ +++TLVS ++A S L   +    ++ + +  G + +  +AS+
Sbjct: 363 LFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASA 422

Query: 503 LVDMYARCGALDIANKVFNCV--QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           L+DM A+CG ++   +VF+ +   T+ ++ W+SMI A G+HG GK A++LF +M    + 
Sbjct: 423 LIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYE 482

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
           P+ IT++++L ACSH+GL+ +GK     M  DY + P  +HYACLVDLLGRA HL+EA+ 
Sbjct: 483 PNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHN 542

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
            + +M I+    +W +LL AC +H N +LGEIV KK+L LD  + G++VL++N++  + +
Sbjct: 543 VILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGR 602

Query: 681 WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
           W DV ++R+ +R SGL+K PG S+IEIGN+++SF+A D+SH ES+ IYK+L  + E++ +
Sbjct: 603 WDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRK 662

Query: 741 EGGYVAQTQFVLHNVEEEEKVQMLYG---HSERLAIAYGVL----KST------EGSLIR 787
              YV +T     NVE+ +   ++     HSERLAIA+G++     ST        + IR
Sbjct: 663 AAKYVTETGL---NVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIR 719

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ITKNLRVC DCH++ KLVS++  REL+VRDA+RFHHF  G CSCGDYW
Sbjct: 720 ITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 194/682 (28%), Positives = 317/682 (46%), Gaps = 54/682 (7%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCG 77
           +S +  F WN+++    +   P   L  ++RM+   +  + FTFP ++KACA L+ L   
Sbjct: 13  ISHKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-DVVLWNSIISAYS 136
            ++H  + + G  +  F   +LV  Y KC     A Q+FD M E   DVV W ++ISAYS
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 137 ASGQCLEALGLFREMQ-----------RVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           ++G   EA   F  M+            V +V+      A    C  +     G  +H  
Sbjct: 132 SNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRR-GSAVHGL 190

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQNDLYC 243
            VK G  +  ++ N+++ MY+ C  +  A  V     +E +D VSWNS+++GF  N    
Sbjct: 191 VVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAE 250

Query: 244 KAMQFFRELQGAGQ---KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG----FVSDL 296
           +A++ F ++   G    +P++V  +  + +   LG +     +H Y   +        D+
Sbjct: 251 RALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDV 310

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +   L+DM+A+C  +     +F  +  ++ + W+ +IAGY Q +C  +AL LFR + +E
Sbjct: 311 VVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLME 370

Query: 357 G------LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
           G      +  + + + SV+ ACS L        IH Y +  GL  D  I +A++D+  KC
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 410 GNIDYSRNVFESIE--SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           G+I++ R VF  ++  ++ VVSW+SMI +   +G    ALELF  M     E + IT +S
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYIS 490

Query: 468 ALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQT 525
            LSA S   ++++GK   N      G +  G   + LVD+  R G LD A N + N    
Sbjct: 491 VLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIK 550

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYK-MEAESFAPDHITFLALLY------------- 571
            DL LW S++ A  LHG  K+   +  K +  +S +  H   LA +Y             
Sbjct: 551 ADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMR 610

Query: 572 -ACSHSGLIN-EGKKFLEIMRCDYQL----DPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
                SGL    G+ F+EI    Y         PE      +L G    + +A ++V   
Sbjct: 611 VELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTET 670

Query: 626 QIEPTAEVWCALLGACRVHSNK 647
            +         L+  C+ HS +
Sbjct: 671 GLNVEDGDIAGLIXRCKYHSER 692



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 238/466 (51%), Gaps = 31/466 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRT--VFTWNAMLGAYVSNGEPLRVLETYSRMRVLG------ 53
           YGKCG    A Q+FD++ + +  V +W A++ AY SNG        + RMR +       
Sbjct: 97  YGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSE 156

Query: 54  -ISVDAFTFPCVIKACAMLKDLDC---GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDF 109
              VD  +   ++ ACA+    +C   G+ +HGLV+K G+  +  + NS+V MY+ C D 
Sbjct: 157 CCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDV 216

Query: 110 RKARQLFDRMG-EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG---LVTNAYTFVA 165
             A ++F+ +  E+ DVV WNS+IS +  +G+   AL  F +M   G   +  N  T +A
Sbjct: 217 GGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIA 276

Query: 166 ALQACEDSSFETLGMEIHAATVKSGQNL----QVYVANALIAMYARCGKMTEAAGVLYQL 221
            L++C +         +H        +L     V V  AL+ M+ARCG +  A  +   +
Sbjct: 277 LLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGV 336

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ------KPDQVCTVNAVSASGRLG 275
           E K+ V W++M+ G+ Q     +A++ FR++   G       KP+ V  V+ ++A  RLG
Sbjct: 337 EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLG 396

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--TAQDFISWTTI 333
              +   +H YA+  G   D +I + L+DM AKC  + +  +VF +M  + +  +SW+++
Sbjct: 397 ASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSM 456

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-G 392
           I     +    +ALELF  ++  G + + +   SVL ACS    + Q K     + +  G
Sbjct: 457 IGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYG 516

Query: 393 LSDLVILNA-IVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           +S      A +VD+ G+ G++D + NV  ++  K D+  W S++++
Sbjct: 517 MSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAA 562



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 113/247 (45%), Gaps = 19/247 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM----RVLGISV 56
           M+ +CG++  A ++FD V  + V  W+AM+  Y     P   L  + +M     ++G+ V
Sbjct: 319 MHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEV 378

Query: 57  --DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
             +A T   VI AC+ L      + IH   +  G D    I ++L+ M AKC D    RQ
Sbjct: 379 KPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQ 438

Query: 115 LFDRMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           +F  M E    VV W+S+I A    G+   AL LF EM+  G   N  T+++ L AC  +
Sbjct: 439 VFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHA 498

Query: 174 SFETLG------MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DS 226
                G      ME       +G++        L+ +  R G + EA  V+  +  K D 
Sbjct: 499 GLVEQGKSCFNSMEKDYGMSPTGKHYA-----CLVDLLGRAGHLDEAHNVILNMPIKADL 553

Query: 227 VSWNSML 233
             W S+L
Sbjct: 554 ALWGSLL 560


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 281/801 (35%), Positives = 444/801 (55%), Gaps = 42/801 (5%)

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D+D    +H  +LK G D+   + N+++A Y K      A ++F  M    DVV ++++I
Sbjct: 119 DIDLARALHASILKLGEDT--HLGNAVIAAYIKLGLVVDAYEVFMGMS-TPDVVSYSALI 175

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           S++S   +  EA+ LF  M+  G+  N Y+FVA L AC  S    +G+++HA  +K G +
Sbjct: 176 SSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYS 235

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
             V+VANALI +Y +CG +  A  +  ++  +D  SWN+M++  V+   Y KA++ FR L
Sbjct: 236 QLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVL 295

Query: 253 -QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
            Q  G K DQ      ++A  R    + G+E+HAYAI+ G  ++L + N ++  Y +C  
Sbjct: 296 NQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGS 355

Query: 312 VNYMGRVFYQMTAQDFISWTTIIA-------------------------------GYAQN 340
           +N++  +F +M  +D I+WT +I                                G+ +N
Sbjct: 356 LNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKN 415

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
           N  LKAL LF  +  EG +     +  V+ AC  L  +  +++IHG+II+ G  S+  I 
Sbjct: 416 NEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIE 475

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESK--DVVSWTSMISSYVHNGLANEALELFY-LMNEA 456
            A++D+  KCG +D +  +F+S+ +   + +  TSMI  Y  NGL  EA+ LFY   +E 
Sbjct: 476 AALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEG 535

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +  D +   S L    +L   + GK+++   ++ GF+ E  V +S++ MY++C  +D A
Sbjct: 536 TMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDA 595

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL--YACS 574
            K FN +   D++ W  +I    LH +G  A+ ++  ME     PD ITF+ ++  Y  +
Sbjct: 596 IKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFT 655

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
            S L++E +     M+  + L+P  EHYA LV +LG    LEEA + +  M  +P   VW
Sbjct: 656 SSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVW 715

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALL  CR+H+N  +G+ VAK ++ ++P +P  YVL+SN++AAS +W   E VR  MR  
Sbjct: 716 RALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSNLYAASGRWHCSEMVRENMRDR 775

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           GL+K P  SW+ I  ++H+F ARDKSH +S++IY  L  +  K  +  GY     FVL  
Sbjct: 776 GLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGLDILILKCLK-AGYEPDMSFVLQE 834

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           VEE++K   L+ HS +LA  YG+LK+  G  IR+ KN+ +C DCH+F K  + +  RE++
Sbjct: 835 VEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRVVKNILLCRDCHTFLKYATVVTQREII 894

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
            RDA+ FH F  G CSC  YW
Sbjct: 895 FRDASGFHCFSNGQCSCKGYW 915



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 174/618 (28%), Positives = 301/618 (48%), Gaps = 50/618 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G V+DA ++F  +S   V +++A++ ++         ++ + RMR+ GI  + ++F
Sbjct: 147 YIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSF 206

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ AC    +L+ G ++H L +K GY    F+ N+L+ +Y KC     A  LFD M +
Sbjct: 207 VAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQ 266

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGM 180
           + D+  WN++IS+        +AL LFR + Q  G   + +T    L AC        G 
Sbjct: 267 R-DIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGR 325

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV----------------------- 217
           EIHA  ++ G    + V+NA+I  Y RCG +   A +                       
Sbjct: 326 EIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFG 385

Query: 218 --------LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
                     ++  K+SVS+N++LTGF +N+   KA+  F  +   G +         ++
Sbjct: 386 LVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVIN 445

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ--DF 327
           A G L  L   +++H + IK GF S+  I   L+DM +KC  ++   R+F  ++    + 
Sbjct: 446 ACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNS 505

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHG 386
           I  T++I GYA+N    +A+ LF   Q EG +  D +   S+L  C  L      K+IH 
Sbjct: 506 IIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHC 565

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
             ++ G  ++L + N+I+ +Y KC NID +   F ++   DVVSW  +I+  + +   +E
Sbjct: 566 QALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDE 625

Query: 446 ALELFYLMNEANVESDSITLVSALSAA--SSLSILKKGKELNGFIIRKGF-NLEGSVA-- 500
           AL ++  M +A ++ D+IT V  +SA   +S ++L + + L  F+  K   +LE +    
Sbjct: 626 ALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSL--FLSMKMIHDLEPTSEHY 683

Query: 501 SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR---GKVAIDLFYKMEA 556
           +SLV +    G L+ A ++ N +    ++ +W ++++   LH     GK        ME 
Sbjct: 684 ASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEP 743

Query: 557 ESFAPDHITFLALLYACS 574
               P     ++ LYA S
Sbjct: 744 RD--PSTYVLVSNLYAAS 759



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 191/417 (45%), Gaps = 46/417 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----GISV 56
           +YGKCG +  A  LFD++ QR + +WN M+ + V      + LE +   RVL    G   
Sbjct: 247 LYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELF---RVLNQNKGFKA 303

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D FT   ++ ACA       G +IH   ++ G ++   + N+++  Y +C        LF
Sbjct: 304 DQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALF 363

Query: 117 DRMGEKEDVVLWNSIISAYSASG-------------------------------QCLEAL 145
           +RM  + D++ W  +I+AY   G                               + L+AL
Sbjct: 364 ERMPVR-DIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKAL 422

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
            LF  M + G     +T    + AC       +  +IH   +K G      +  ALI M 
Sbjct: 423 NLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMC 482

Query: 206 ARCGKMTEAAGVLYQL--ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP-DQV 262
           ++CG+M +A  +   L  +  +S+   SM+ G+ +N L  +A+  F   Q  G    D+V
Sbjct: 483 SKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEV 542

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
              + +   G LG    GK++H  A+K GF ++L +GN+++ MY+KC  ++   + F  M
Sbjct: 543 AFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTM 602

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD----VMIIGSVLMACSGL 375
              D +SW  +IAG   +    +AL ++ +++  G+  D    V+I+ +     S L
Sbjct: 603 PGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNL 659



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 10/243 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR--TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-D 57
           M  KCG + DA+++F  +S          +M+  Y  NG P   +  + R +  G  V D
Sbjct: 481 MCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLD 540

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              F  ++  C  L   + G +IH   LK G+ +   + NS+++MY+KCY+   A + F+
Sbjct: 541 EVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFN 600

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            M    DVV WN +I+      Q  EAL ++  M++ G+  +A TFV  + A + +S   
Sbjct: 601 TM-PGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNL 659

Query: 178 L----GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSM 232
           L     + +    +   +    + A +L+ +    G + EA  ++ ++     VS W ++
Sbjct: 660 LDECRSLFLSMKMIHDLEPTSEHYA-SLVGVLGYWGLLEEAEELINKMPFDPEVSVWRAL 718

Query: 233 LTG 235
           L G
Sbjct: 719 LDG 721


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 290/812 (35%), Positives = 458/812 (56%), Gaps = 44/812 (5%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKAR 113
           +D    P  IK+ A L+D      IH   L+ G  +  +  + N+L+  YA+C     A 
Sbjct: 55  LDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAAL 114

Query: 114 QLFDRMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQRV----------GLVTNAYT 162
           ++F  + +   D V +NS+ISA          L LFR               G    ++T
Sbjct: 115 EVFGSISDSAHDAVSFNSLISA----------LCLFRRWDHALAALRAMLAGGHPLTSFT 164

Query: 163 FVAALQACED----SSFETLGMEIHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAG 216
            V+ L+A       ++   LG E HA  +K+G     Q +  NAL++MYAR G + +A  
Sbjct: 165 LVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQR 224

Query: 217 VLYQLE--NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
           +         D V+WN+M++  VQ+ ++ +A+Q   ++   G +PD V   +A+ A  RL
Sbjct: 225 LFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRL 284

Query: 275 GNLLNGKELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--TAQDFISWT 331
             L  G+E+HAY IK     ++  + + L+DMYA    V    +VF  +  + +    W 
Sbjct: 285 ELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWN 344

Query: 332 TIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
            +I GYAQ     +AL LF  ++ E G       + SVL AC+  +  +  + +HGY+++
Sbjct: 345 AMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVK 404

Query: 391 KGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
           +G++ +  + NA++D+Y + G  D +R +F  ++  DVVSW ++I+  V  G   +A +L
Sbjct: 405 RGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQL 464

Query: 450 FYLMN---EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
              M    E  V  ++ITL++ L   + L+   +GKE++G+ +R   + + +V S+LVDM
Sbjct: 465 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 524

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA-PDHIT 565
           YA+CG L ++  VF+ +  ++ I W  +I A G+HG G  A  LF +M A   A P+ +T
Sbjct: 525 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVT 584

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F+A L ACSHSG+++ G +    M  D+ ++P P+  AC+VD+LGRA  L+EAY  V SM
Sbjct: 585 FMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSM 644

Query: 626 QI-EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           +  E     W  +LGACR+H N  LGEI  ++LLEL+P    +YVL+ N+++A+ +W   
Sbjct: 645 EAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRA 704

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI-TEKLEREGG 743
            +VR RMR  G+ K PG SWIE+   IH F+A + +H  S+E++  +  +  E + R  G
Sbjct: 705 AEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVAR--G 762

Query: 744 YVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
           Y   T  VLH++++ +K  +L  HSE+LAIA+G+L++  G+ IR+ KNLRVC DCH   K
Sbjct: 763 YTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAK 822

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +S++ GRE+V+RD  RFHHF  G CSCGDYW
Sbjct: 823 FLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 223/454 (49%), Gaps = 23/454 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVS--QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY + G V DA++LF   +  +  V TWN M+   V +G     ++T   M  LG+  D 
Sbjct: 212 MYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 271

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            TF   + AC+ L+ LD G ++H  V+K     +  F+ ++LV MYA      KARQ+FD
Sbjct: 272 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 331

Query: 118 RMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSF 175
            + +  + + +WN++I  Y+ +G   EAL LF  M+   G V    T  + L AC  S  
Sbjct: 332 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 391

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                 +H   VK G     +V NAL+ MYAR GK   A  +   ++  D VSWN+++TG
Sbjct: 392 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 451

Query: 236 FVQNDLYCKAMQFFRELQG---AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
            V       A Q  RE+Q     G  P+ +  +  +     L     GKE+H YA++   
Sbjct: 452 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 511

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            +D+ +G+ L+DMYAKC C+     VF ++  ++ I+W  +I  Y  +    +A  LF  
Sbjct: 512 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 571

Query: 353 VQLEG-LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVD 404
           +   G    + +   + L ACS       GL+     +  HG    +   D  IL  +VD
Sbjct: 572 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGV---EPTPD--ILACVVD 626

Query: 405 VYGKCGNIDYSRNVFESIES--KDVVSWTSMISS 436
           + G+ G +D +  +  S+E+  + V +W++M+ +
Sbjct: 627 ILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGA 660


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/714 (35%), Positives = 416/714 (58%), Gaps = 2/714 (0%)

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            + V + ++I  Y  S Q  E + LF  + R G   N + F   L+         L   +
Sbjct: 4   RNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSL 63

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA   K G     +V  ALI  YA CG +  A      +  KD VSW  M+  + +ND +
Sbjct: 64  HACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRF 123

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
             ++Q F E++  G  P+       + A   L     GK +H   +K  +  DL +G  L
Sbjct: 124 QDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGL 183

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +D+Y K    N + RVF +M   D I W+ +I+ YAQ+N   +A+ELF  ++   +  + 
Sbjct: 184 LDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQ 243

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFES 421
               SVL +C+ ++ +   K++H ++++ GL  ++ + NA++DVY KCG +D S  +F  
Sbjct: 244 FTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFME 303

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           + +++ V+W +MI  YV +G  ++AL L+  M E  V++  +T  S L A +SL+ ++ G
Sbjct: 304 LPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELG 363

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
            +++   ++  ++ +  V ++L+DMYA+CG++  A  VF+ +  +D I W +MI+   +H
Sbjct: 364 TQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMH 423

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G    A+  F  M+     P+ +TF+++L ACS++GL++ G+ + + M  DY ++P  EH
Sbjct: 424 GLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEH 483

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           Y C+V LLGR+ HL++A + +  + +EP  +VW ALLGAC +H++ +LG + A+++L++D
Sbjct: 484 YTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQID 543

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
           P +   +VL+SN++A +R+W  V  VR  M+  G+KK PG SWIE    +H F   D SH
Sbjct: 544 PQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSH 603

Query: 722 SESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKST 781
            +   I   L  +  K E+  GYV     VL +VE++EK + L+ HSERLA+A+G++++ 
Sbjct: 604 PDMKMISGMLEWLNMKTEK-AGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTP 662

Query: 782 EGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
               IRI KNLR+C DCHS  KL+S++  R++++RD NRFHHF+ G+CSCGDYW
Sbjct: 663 SRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/535 (27%), Positives = 283/535 (52%), Gaps = 6/535 (1%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCG 77
           +  R   ++  ++  YV + +   V++ +SR+   G  ++ F F  ++K    ++  +  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
             +H  + K G++S  F+  +L+  YA C     ARQ FD +  K D+V W  +++ Y+ 
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACK-DMVSWTGMVACYAE 119

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
           + +  ++L LF EM+ VG   N +TF   L+AC      ++G  +H   +K+   + +YV
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV 179

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
              L+ +Y + G   +   V  ++   D + W+ M++ + Q++   +A++ F +++ A  
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
            P+Q    + + +   + NL  GK++H + +K G   ++ + N LMD+YAKC  ++   +
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMK 299

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           +F ++  ++ ++W T+I GY Q+    KAL L++ +    + A  +   SVL AC+ L  
Sbjct: 300 LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAA 359

Query: 378 MSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           M    +IH   ++     D+V+ NA++D+Y KCG+I  +R VF+ +  +D +SW +MIS 
Sbjct: 360 MELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISG 419

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           Y  +GL  EAL+ F +M E     + +T VS LSA S+  +L  G+     +++  + +E
Sbjct: 420 YSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQD-YGIE 478

Query: 497 GSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAI 548
             +   + +V +  R G LD A K+   +  + ++ +W +++ A  +H    + I
Sbjct: 479 PCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGI 533



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 239/446 (53%), Gaps = 11/446 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CGSV  A Q FD ++ + + +W  M+  Y  N      L+ ++ MR++G + + FTF
Sbjct: 86  YAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTF 145

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+KAC  L+    G  +HG VLK  Y+   ++   L+ +Y K  D     ++F+ M  
Sbjct: 146 AGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEM-P 204

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ W+ +IS Y+ S Q  EA+ LF +M+R  ++ N +TF + LQ+C       LG +
Sbjct: 205 KHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQ 264

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +K G +  V+V+NAL+ +YA+CG++  +  +  +L N++ V+WN+M+ G+VQ+  
Sbjct: 265 VHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGD 324

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA+  ++ +     +  +V   + + A   L  +  G ++H+ ++K  +  D+ +GN 
Sbjct: 325 GDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNA 384

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC  +     VF  ++ +D ISW  +I+GY+ +    +AL+ F+ +Q      +
Sbjct: 385 LIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPN 444

Query: 362 VMIIGSVLMACS--GLKCMSQT---KEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
            +   S+L ACS  GL  + Q      +  Y I   +        +V + G+ G++D + 
Sbjct: 445 KLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEH---YTCMVWLLGRSGHLDKAV 501

Query: 417 NVFESIE-SKDVVSWTSMISS-YVHN 440
            + E I    +V  W +++ +  +HN
Sbjct: 502 KLIEEIPLEPNVKVWRALLGACVIHN 527



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 156/281 (55%), Gaps = 1/281 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G   D  ++F+++ +  V  W+ M+  Y  + +    +E + +MR   +  + FT
Sbjct: 186 LYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFT 245

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+++CA +++L  G ++H  VLK G D   F+ N+L+ +YAKC     + +LF  + 
Sbjct: 246 FASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELP 305

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + +V  WN++I  Y  SG   +AL L++ M    +  +  T+ + L+AC   +   LG 
Sbjct: 306 NRNEVT-WNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGT 364

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH+ ++K+  +  V V NALI MYA+CG +  A  V   L  +D +SWN+M++G+  + 
Sbjct: 365 QIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHG 424

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
           L  +A++ F+ +Q     P+++  V+ +SA    G L  G+
Sbjct: 425 LVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQ 465



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 128/244 (52%), Gaps = 4/244 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + ++ +LF ++  R   TWN M+  YV +G+  + L  Y  M    +     T
Sbjct: 287 VYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVT 346

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V++ACA L  ++ G +IH L LK  YD    + N+L+ MYAKC   + AR +FD + 
Sbjct: 347 YSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLS 406

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E++++  WN++IS YS  G   EAL  F+ MQ    V N  TFV+ L AC ++    +G 
Sbjct: 407 ERDEIS-WNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQ 465

Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG-FV 237
               + V+  G    +     ++ +  R G + +A  ++ ++  + +V  W ++L    +
Sbjct: 466 NYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVI 525

Query: 238 QNDL 241
            ND+
Sbjct: 526 HNDV 529



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 133/264 (50%), Gaps = 1/264 (0%)

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
           M  ++ +S+ T+I GY Q+    + ++LF  V  EG + +  +  ++L     ++C    
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 382 KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
             +H  I + G  S+  +  A++D Y  CG+++ +R  F++I  KD+VSWT M++ Y  N
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
               ++L+LF  M       +  T    L A   L     GK ++G +++  + ++  V 
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
             L+D+Y + G  +   +VF  +   D+I W+ MI+      + + A++LF +M      
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 561 PDHITFLALLYACSHSGLINEGKK 584
           P+  TF ++L +C+    +  GK+
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQ 264


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 290/812 (35%), Positives = 458/812 (56%), Gaps = 44/812 (5%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKAR 113
           +D    P  IK+ A L+D      IH   L+ G  +  +  + N+L+  YA+C     A 
Sbjct: 55  LDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAAL 114

Query: 114 QLFDRMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQRV----------GLVTNAYT 162
           ++F  + +   D V +NS+ISA          L LFR               G    ++T
Sbjct: 115 EVFGSISDSAHDAVSFNSLISA----------LCLFRRWDHALAALRAMLAGGHPLTSFT 164

Query: 163 FVAALQACED----SSFETLGMEIHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAG 216
            V+ L+A       ++   LG E HA  +K+G     Q +  NAL++MYAR G + +A  
Sbjct: 165 LVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQR 224

Query: 217 VLYQLE--NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
           +         D V+WN+M++  VQ+ ++ +A+Q   ++   G +PD V   +A+ A  RL
Sbjct: 225 LFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRL 284

Query: 275 GNLLNGKELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--TAQDFISWT 331
             L  G+E+HAY IK     ++  + + L+DMYA    V    +VF  +  + +    W 
Sbjct: 285 ELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWN 344

Query: 332 TIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
            +I GYAQ     +AL LF  ++ E G       + SVL AC+  +  +  + +HGY+++
Sbjct: 345 AMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVK 404

Query: 391 KGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
           +G++ +  + NA++D+Y + G  D +R +F  ++  DVVSW ++I+  V  G   +A +L
Sbjct: 405 RGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQL 464

Query: 450 FYLMN---EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
              M    E  V  ++ITL++ L   + L+   +GKE++G+ +R   + + +V S+LVDM
Sbjct: 465 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 524

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA-PDHIT 565
           YA+CG L ++  VF+ +  ++ I W  +I A G+HG G  A  LF +M A   A P+ +T
Sbjct: 525 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVT 584

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F+A L ACSHSG+++ G +    M  D+ ++P P+  AC+VD+LGRA  L+EAY  V SM
Sbjct: 585 FMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSM 644

Query: 626 QI-EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           +  E     W  +LGACR+H N  LGEI  ++LLEL+P    +YVL+ N+++A+ +W   
Sbjct: 645 ETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRA 704

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI-TEKLEREGG 743
            +VR RMR  G+ K PG SWIE+   IH F+A + +H  S+E++  +  +  E + R  G
Sbjct: 705 AEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVAR--G 762

Query: 744 YVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
           Y   T  VLH++++ +K  +L  HSE+LAIA+G+L++  G+ IR+ KNLRVC DCH   K
Sbjct: 763 YTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAK 822

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +S++ GRE+V+RD  RFHHF  G CSCGDYW
Sbjct: 823 FLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 223/454 (49%), Gaps = 23/454 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVS--QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY + G V DA++LF   +  +  V TWN M+   V +G     ++T   M  LG+  D 
Sbjct: 212 MYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 271

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            TF   + AC+ L+ LD G ++H  V+K     +  F+ ++LV MYA      KARQ+FD
Sbjct: 272 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 331

Query: 118 RMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSF 175
            + +  + + +WN++I  Y+ +G   EAL LF  M+   G V    T  + L AC  S  
Sbjct: 332 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 391

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                 +H   VK G     +V NAL+ MYAR GK   A  +   ++  D VSWN+++TG
Sbjct: 392 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 451

Query: 236 FVQNDLYCKAMQFFRELQG---AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
            V       A Q  RE+Q     G  P+ +  +  +     L     GKE+H YA++   
Sbjct: 452 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 511

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            +D+ +G+ L+DMYAKC C+     VF ++  ++ I+W  +I  Y  +    +A  LF  
Sbjct: 512 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 571

Query: 353 VQLEG-LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVD 404
           +   G    + +   + L ACS       GL+     +  HG    +   D  IL  +VD
Sbjct: 572 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGV---EPTPD--ILACVVD 626

Query: 405 VYGKCGNIDYSRNVFESIES--KDVVSWTSMISS 436
           + G+ G +D +  +  S+E+  + V +W++M+ +
Sbjct: 627 ILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGA 660


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 288/846 (34%), Positives = 453/846 (53%), Gaps = 43/846 (5%)

Query: 28  AMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKC 87
           AMLG  +     +    T ++  +L  S      P  +K C  + +L      H  + K 
Sbjct: 2   AMLGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDEL---KMFHRSLTKQ 58

Query: 88  GYDSTDFIVNSLVAMYAKC---YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           G D+    +  LVA   +         A+++F+         ++NS+I  Y++SG C EA
Sbjct: 59  GLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEA 118

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
           + LF  M   G+  + YTF   L AC  S  +  G++IH   VK G    ++V N+L+  
Sbjct: 119 ILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ-FFRELQGAGQKPDQVC 263
           YA CG++  A  V  ++  ++ VSW SM+ G+ + D    A+  FFR ++     P+ V 
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
            V  +SA  +L +L  G++++A+    G  V+DL + + L+DMY KC  ++   R+F + 
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEY 297

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
            A +      + + Y +     +AL +F  +   G+  D + + S + +CS L+ +   K
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357

Query: 383 EIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
             HGY++R G      I NA++D+Y KC   D +  +F+ + +K VV+W S+++ YV NG
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417

Query: 442 LANEALELFYLMNEAN--------------------------------VESDSITLVSAL 469
             + A E F  M E N                                V +D +T++S  
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           SA   L  L   K +  +I + G  L+  + ++LVDM++RCG  + A  +FN +  +D+ 
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            WT+ I A  + G  + AI+LF  M  +   PD + F+  L ACSH GL+ +GK+    M
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
              + + P   HY C+VDLLGRA  LEEA Q +  M +EP   +W +LL ACRV  N E+
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
               A+K+  L P   G+YVL+SNV+A++ +W D+ +VR+ M+  GL+K PG+S I+I  
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           K H F + D+SH E   I   L E++++     G+V     VL +V+E+EK+ ML  HSE
Sbjct: 718 KTHEFTSGDESHPEMPNIEAMLDEVSQRASHL-GHVPDLSNVLMDVDEKEKIFMLSRHSE 776

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           +LA+AYG++ S +G+ IRI KNLRVC DCHSF K  S+++ RE+++RD NRFH+   G C
Sbjct: 777 KLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKC 836

Query: 830 SCGDYW 835
           SCGD+W
Sbjct: 837 SCGDFW 842



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 173/597 (28%), Positives = 308/597 (51%), Gaps = 40/597 (6%)

Query: 11  AEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           A+++F+   S  T F +N+++  Y S+G     +  + RM   GIS D +TFP  + ACA
Sbjct: 86  AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
             +    G +IHGL++K GY    F+ NSLV  YA+C +   AR++FD M E+ +VV W 
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER-NVVSWT 204

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGMEIHAATVK 188
           S+I  Y+      +A+ LF  M R   VT N+ T V  + AC        G +++A    
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
           SG  +   + +AL+ MY +C  +  A  +  +    +    N+M + +V+  L  +A+  
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           F  +  +G +PD++  ++A+S+  +L N+L GK  H Y ++ GF S   I N L+DMY K
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN---------------------------- 340
           C   +   R+F +M+ +  ++W +I+AGY +N                            
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444

Query: 341 ---NCHLKALELFRTVQ-LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-D 395
              +   +A+E+F ++Q  EG++AD + + S+  AC  L  +   K I+ YI + G+  D
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + +   +VD++ +CG+ + + ++F S+ ++DV +WT+ I +    G A  A+ELF  M E
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALD 514
             ++ D +  V AL+A S   ++++GKE+   +++  G + E      +VD+  R G L+
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624

Query: 515 IANKVF-NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
            A ++  +     + ++W S++ A  + G  ++A     K++    AP+      LL
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV--LAPERTGSYVLL 679



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 232/472 (49%), Gaps = 39/472 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFT 60
           Y +CG +  A ++FD++S+R V +W +M+  Y         ++ + RM R   ++ ++ T
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             CVI ACA L+DL+ G K++  +   G +  D +V++LV MY KC     A++LFD  G
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              ++ L N++ S Y   G   EALG+F  M   G+  +  + ++A+ +C        G 
Sbjct: 299 -ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN- 239
             H   +++G      + NALI MY +C +   A  +  ++ NK  V+WNS++ G+V+N 
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417

Query: 240 ------------------------------DLYCKAMQFFRELQGA-GQKPDQVCTVNAV 268
                                          L+ +A++ F  +Q   G   D V  ++  
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           SA G LG L   K ++ Y  K G   D+++G TL+DM+++C        +F  +T +D  
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           +WT  I   A      +A+ELF  +  +GL  D +     L ACS    + Q KEI   +
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597

Query: 389 IR-KGLS-DLVILNAIVDVYGKCGNIDYSRNVFE--SIESKDVVSWTSMISS 436
           ++  G+S + V    +VD+ G+ G ++ +  + E   +E  DV+ W S++++
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAA 648



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 156/351 (44%), Gaps = 45/351 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC ++  A++LFD+     +   NAM   YV  G     L  ++ M   G+  D  +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I +C+ L+++  G   HG VL+ G++S D I N+L+ MY KC+    A ++FDRM 
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399

Query: 121 EKEDVVLWNSIISAYSASGQC-------------------------------LEALGLFR 149
            K  VV WNSI++ Y  +G+                                 EA+ +F 
Sbjct: 400 NKT-VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458

Query: 150 EMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            MQ + G+  +  T ++   AC       L   I+    K+G  L V +   L+ M++RC
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G    A  +   L N+D  +W + +          +A++ F ++   G KPD V  V A+
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVS--DLQIGNTLMDMYAKCCCVNYMGR 317
           +A    G +  GKE+    +K   VS  D+  G          C V+ +GR
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG----------CMVDLLGR 619



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 1/141 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ +CG    A  +F+ ++ R V  W A +GA    G   R +E +  M   G+  D   
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F   + AC+    +  G +I   +LK  G    D     +V +  +     +A QL + M
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633

Query: 120 GEKEDVVLWNSIISAYSASGQ 140
             + + V+WNS+++A    G 
Sbjct: 634 PMEPNDVIWNSLLAACRVQGN 654


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/712 (36%), Positives = 416/712 (58%), Gaps = 40/712 (5%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
           F +  +A   ++  T   ++H+  +  G +  V  +  LIA YA     T +  V     
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75

Query: 223 NKDSVS-WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             ++V  WNS++     N L+ +A+  + E Q    +PD     + ++A   L +    K
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
            +H   +  GF SDL IGN L+DMY +   ++   +VF +M  +D +SW ++I+GY  N 
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195

Query: 342 CHLKALELF-RTVQL-----EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
              +ALE++ ++++L          D++ I S+L AC  L  +   K +H Y+I  G   
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 255

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF---- 450
           D    N ++++Y KCGN+  S+ VF  ++ KD VSW SMI+ Y+ NG   ++L++F    
Sbjct: 256 DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMK 315

Query: 451 ---------------------------YLMNEANVESDSITLVSALSAASSLSILKKGKE 483
                                        M    V  D  T++S L   S L+  ++GKE
Sbjct: 316 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 375

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++G I + G   +  V + L++MY++CG+L  + +VF  ++TKD++ WT++I+A G++G 
Sbjct: 376 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 435

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
           GK A+  F +MEA    PDH+ F+A+++ACSHSGL+ EG  +   M+ DY+++P  EHYA
Sbjct: 436 GKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYA 495

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C+VDLL R+  L++A  F+ SM ++P + +W ALL ACR+  + E+ E V+++++EL+P 
Sbjct: 496 CVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPD 555

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           + G YVL+SN++AA  KW  V  +R  ++  GLKK PG SW+EI NK++ F    K   +
Sbjct: 556 DTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQ 615

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
            +E+ K L  +   + +E GY+A  QFVLH+++E+EK  +L GHSERLAIA+G+L +  G
Sbjct: 616 FEEVNKLLGMLAGLMAKE-GYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPG 674

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +++ KNLRVC DCH+  K +S++  REL+VRDANRFH F+ G CSCGDYW
Sbjct: 675 TPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 166/554 (29%), Positives = 272/554 (49%), Gaps = 57/554 (10%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN 97
           + LRVL   SR  +         F  + +A A         K+H L++  G   +     
Sbjct: 2   KTLRVLHECSRQTL---------FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSA 52

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
            L+A YA   D   +  +F       +V LWNSII A + +G   EAL L+ E QR+ L 
Sbjct: 53  KLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQ 112

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            + YTF + + AC       +   IH   +  G    +Y+ NALI MY R   + +A  V
Sbjct: 113 PDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKV 172

Query: 218 LYQLENKDSVSWNSMLTGFVQN-------DLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
             ++  +D VSWNS+++G+  N       ++Y ++++ F E+     KPD +   + + A
Sbjct: 173 FEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQF-KPDLLTITSILQA 231

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC--------------------- 309
            G LG+L  GK +H Y I  G+  D    N L++MYAKC                     
Sbjct: 232 CGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSW 291

Query: 310 -CCVNY------MG---RVFYQMTAQDFISWTTIIAGYAQN-NCHLKALELFRTVQLEGL 358
              +N       MG   +VF  M A+D I+W TIIA    + +C+L  L +   ++ EG+
Sbjct: 292 NSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL-GLRMISRMRTEGV 350

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D+  + S+L  CS L    Q KEIHG I + GL SD+ + N ++++Y KCG++  S  
Sbjct: 351 TPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQ 410

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ +++KDVV+WT++IS+    G   +A+  F  M  A +  D +  V+ + A S   +
Sbjct: 411 VFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGL 470

Query: 478 LKKGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
           +++G  LN F  ++K + +E  +   + +VD+ +R   LD A      +  K D  +W +
Sbjct: 471 VEEG--LNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGA 528

Query: 534 MINANGLHGRGKVA 547
           +++A  + G  ++A
Sbjct: 529 LLSACRMSGDTEIA 542



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 184/388 (47%), Gaps = 38/388 (9%)

Query: 23  VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHG 82
           V+ WN+++ A   NG     L  YS  + + +  D +TFP VI ACA L D +    IH 
Sbjct: 80  VYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHD 139

Query: 83  LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCL 142
            VL  G+ S  +I N+L+ MY +  D  KAR++F+ M  + DVV WNS+IS Y+A+G   
Sbjct: 140 RVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSLISGYNANGYWN 198

Query: 143 EALGLFRE-----MQRVG-LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
           EAL ++ +     M+ V     +  T  + LQAC        G  +H   + SG      
Sbjct: 199 EALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTT 258

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG-- 254
            +N LI MYA+CG +  +  V   ++ KDSVSWNSM+  ++QN     +++ F  ++   
Sbjct: 259 ASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARD 318

Query: 255 -----------------------------AGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
                                         G  PD    ++ +     L     GKE+H 
Sbjct: 319 IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHG 378

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
              K G  SD+ +GN L++MY+KC  +    +VF  M  +D ++WT +I+         K
Sbjct: 379 CIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKK 438

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACS 373
           A+  F  ++  G+  D +   +++ ACS
Sbjct: 439 AVRAFGEMEAAGIVPDHVAFVAIIFACS 466



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/496 (23%), Positives = 208/496 (41%), Gaps = 74/496 (14%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV---- 56
           MY +   +  A ++F+++  R V +WN+++  Y +NG     LE Y +   L + +    
Sbjct: 159 MYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQF 218

Query: 57  --DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
             D  T   +++AC  L DL+ G  +H  ++  GY+      N L+ MYAKC +   +++
Sbjct: 219 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 278

Query: 115 LFD---------------------RMGEK---------EDVVLWNSIISAYSASGQCLEA 144
           +F                      +MG+           D++ WN+II++   S  C   
Sbjct: 279 VFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG 338

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
           L +   M+  G+  +  T ++ L  C   + +  G EIH    K G    V V N LI M
Sbjct: 339 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEM 398

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           Y++CG +  +  V   ++ KD V+W ++++         KA++ F E++ AG  PD V  
Sbjct: 399 YSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAF 458

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           V  + A    G +  G   + + +K+ +  + +I     + YA  C V+ + R      A
Sbjct: 459 VAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRI-----EHYA--CVVDLLSRSALLDKA 510

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +DFI                  L +        L  D  I G++L AC         + +
Sbjct: 511 EDFI------------------LSM-------PLKPDSSIWGALLSACRMSGDTEIAERV 545

Query: 385 HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV-----VSWTSMISSYVH 439
              II     D      + ++Y   G  D  R++ +SI+++ +      SW  + +    
Sbjct: 546 SERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYV 605

Query: 440 NGLANEALELFYLMNE 455
            G   +  E F  +N+
Sbjct: 606 FGTGTKFFEQFEEVNK 621



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 8/228 (3%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVFE-S 421
           +  S+  A +     +Q  ++H  II  GL   VI +A ++  Y    +   S +VF  +
Sbjct: 15  LFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 74

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
             S +V  W S+I +  HNGL +EAL L+       ++ D+ T  S ++A + L   +  
Sbjct: 75  SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           K ++  ++  GF  +  + ++L+DMY R   LD A KVF  +  +D++ W S+I+    +
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194

Query: 542 GRGKVAIDLFYK-----ME-AESFAPDHITFLALLYACSHSGLINEGK 583
           G    A++++Y+     ME    F PD +T  ++L AC H G +  GK
Sbjct: 195 GYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGK 242


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 273/808 (33%), Positives = 435/808 (53%), Gaps = 18/808 (2%)

Query: 40  LRVLETYSRMRVLGISVDAFTF-----PCVIKACAMLKDLD-----CGAKIHGLVLKCGY 89
           L+ L   S  + L   +DA        P   +   M+KDL      C A+    +L    
Sbjct: 14  LKTLHGASSRQTLQTCIDARIVKTGFDPITSRFNFMIKDLSERGQLCQAR---QLLDQMP 70

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           +   F ++ +++ Y K  +   AR++FD   E+  VV W ++I AYS S +  +A  LF 
Sbjct: 71  NRNSFSIDIIISGYVKSGNLTVARRIFDDTDERT-VVAWTTMIGAYSKSNRFGDAFKLFA 129

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EM R G   +  T++  L  C D        + HA  VK G +L   V N L+  Y + G
Sbjct: 130 EMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTG 189

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            +  A  +  ++   DSVS+N M+TG+  N L  +A++ F E+Q  G KP        +S
Sbjct: 190 GLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVIS 249

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           AS  L +   G+++H + +K  F+ ++ +GN  +D Y+K  CVN + ++F +M   D +S
Sbjct: 250 ASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVS 309

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG-YI 388
           +  II  YA      ++++LF+ +Q    D       ++L   +    +   +++H   +
Sbjct: 310 YNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVV 369

Query: 389 IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           +     D  + N++VD+Y KCG  + +  +F  + S+  V WT+MIS+ V  GL    L+
Sbjct: 370 VSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLK 429

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           LFY M  ANV +D  T    L A+++L+ +  GK+L+  +IR GF +      +L+DMYA
Sbjct: 430 LFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYA 488

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
            C ++  A K F  +  ++++ W ++++A   +G GK  +  F +M    + PD ++FL 
Sbjct: 489 NCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLC 548

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L ACSH  L+ EG K+   M   Y L P  EHY  +VD L R+   +EA + +  M  E
Sbjct: 549 ILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFE 608

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDP-GNPGNYVLISNVFAASRKWKDVEQV 687
           P   VW ++L +CR+H N  L    A +L  +    +   YV +SN+FA + +W  V +V
Sbjct: 609 PDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKV 668

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           +  MR  G++K P  SW+EI +K+H F A D  H +  EI +K+  + E++E+E GY   
Sbjct: 669 KKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKE-GYDPD 727

Query: 748 TQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSR 807
                 NV++E K+  L  HSERLAIA+ ++ + EGS I + KNLR C DCH+  K++S+
Sbjct: 728 ISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISK 787

Query: 808 LFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + GRE+ VRD+NRFHHF  G CSCGDYW
Sbjct: 788 IVGREITVRDSNRFHHFRDGSCSCGDYW 815



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 276/552 (50%), Gaps = 23/552 (4%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G++  A ++FD   +RTV  W  M+GAY  +       + ++ M   G   D  T+
Sbjct: 84  YVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTY 143

Query: 62  PCVIKACAMLKDLDCGAKI---HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
             ++  C    DL+   ++   H  ++K G+     + N+L+  Y K      AR+LF  
Sbjct: 144 ITLLTGC---NDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLE 200

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC---EDSSF 175
           M    D V +N +I+ Y+ +G   EA+ LF EMQ +G   + +TF A + A    +D++F
Sbjct: 201 MC-GWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAF 259

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G +IH   VK+     V+V NA +  Y++   + E   +  ++   D VS+N ++T 
Sbjct: 260 ---GQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITA 316

Query: 236 FVQNDLYCKAMQFFRELQGA--GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           +       +++  F+ELQ     +K     T+ +++AS    +L  G++LHA  +     
Sbjct: 317 YAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSL--DLQMGRQLHAQVVVSMAD 374

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            D ++ N+L+DMYAKC       R+F +++++  + WT +I+   Q   H   L+LF  +
Sbjct: 375 PDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEM 434

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           +   + AD      VL A + L  +   K++H  +IR G  ++    A++D+Y  C +I 
Sbjct: 435 RRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYSGCALLDMYANCASIK 494

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +   FE +  ++VV+W +++S+Y  NG     L+ F  M  +  + DS++ +  L+A S
Sbjct: 495 DAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACS 554

Query: 474 SLSILKKGKELNGFIIRKG-FNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLI 529
              ++++G  L  F    G +NL       +++VD   R G  D A K+   +    D I
Sbjct: 555 HCRLVEEG--LKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEI 612

Query: 530 LWTSMINANGLH 541
           +WTS++N+  +H
Sbjct: 613 VWTSVLNSCRIH 624



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 243/502 (48%), Gaps = 19/502 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +  A +LF ++      ++N M+  Y +NG     +E +  M+ LG     FTF
Sbjct: 185 YFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTF 244

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             VI A   L D   G +IHG V+K  +    F+ N+ +  Y+K     + R+LF+ M E
Sbjct: 245 AAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPE 304

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D V +N II+AY+  G+  E++ LF+E+Q        + F   L     S    +G +
Sbjct: 305 L-DGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQ 363

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  V S  +    V+N+L+ MYA+CGK  EA  +  +L ++ +V W +M++  VQ  L
Sbjct: 364 LHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGL 423

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           +   ++ F E++ A    DQ      + AS  L ++L GK+LH+  I+ GF+ ++  G  
Sbjct: 424 HENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFM-NVYSGCA 482

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYA C  +    + F +M+ ++ ++W  +++ YAQN      L+ F  + + G   D
Sbjct: 483 LLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPD 542

Query: 362 VMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            +    +L ACS       GLK  +    ++    ++         A+VD   + G  D 
Sbjct: 543 SVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREH-----YTAMVDALCRSGRFDE 597

Query: 415 SRNVFESIE-SKDVVSWTSMISS-YVHN--GLANEALELFYLMNEANVESDSITLVSALS 470
           +  +   +    D + WTS+++S  +H    LA +A    + M      +  +T+ +  +
Sbjct: 598 AEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFA 657

Query: 471 AASSL-SILKKGKELNGFIIRK 491
            A    S++K  K +    +RK
Sbjct: 658 EAGQWDSVVKVKKAMRDRGVRK 679



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 8/237 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG   +A+++F ++S R+   W AM+ A V  G     L+ +  MR   +S D  T
Sbjct: 386 MYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQAT 445

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F CV+KA A L  +  G ++H  V++ G+ +  +   +L+ MYA C   + A + F+ M 
Sbjct: 446 FACVLKASANLASILLGKQLHSCVIRSGFMNV-YSGCALLDMYANCASIKDAIKTFEEMS 504

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +VV WN+++SAY+ +G     L  F EM   G   ++ +F+  L AC        G+
Sbjct: 505 ER-NVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGL 563

Query: 181 EIH---AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           +     +         + Y   A++    R G+  EA  ++ Q+    D + W S+L
Sbjct: 564 KYFNDMSGVYNLAPKREHYT--AMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVL 618


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 273/829 (32%), Positives = 443/829 (53%), Gaps = 80/829 (9%)

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAM--YAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           L CGA      L  G  +   ++   + M  YAK      A +LF RM  + DV  WN++
Sbjct: 74  LSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRM-PRRDVTSWNTL 132

Query: 132 ISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +S Y  SG+ L+A+  F  M+R G  + NA+TF  A+++C    +  + +++     K G
Sbjct: 133 MSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFG 192

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLEN--------------------------- 223
                 VA  ++ M+ RCG +  A+    Q+E                            
Sbjct: 193 FQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFE 252

Query: 224 ----KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
               +D VSWN M++   Q+    +A+    ++   G + D     ++++A  +L +L  
Sbjct: 253 SMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGW 312

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GK+LHA  I+     D  + + ++++YAKC C     RVF  +  ++ +SWT +I G+ Q
Sbjct: 313 GKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQ 372

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL 399
             C  ++LELF  ++ E +  D   + +++  CS    M   +++H   ++ G +  V++
Sbjct: 373 YGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVI 432

Query: 400 -NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-------- 450
            N+++ +Y KCGN+  + ++F S+E +D+VSWT M+++Y   G   +A E F        
Sbjct: 433 SNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNV 492

Query: 451 ------------------------YLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
                                    ++ E +V  D +T V+     + +   K G ++ G
Sbjct: 493 ITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITG 552

Query: 487 FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
             ++ G  L+ SV ++++ MY++CG +  A K+F+ +  KDL+ W +MI     HG GK 
Sbjct: 553 HTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQ 612

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           AI++F  M  +   PD+I+++A+L +CSHSGL+ EGK + ++++ D+ + P  EH++C+V
Sbjct: 613 AIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMV 672

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           DLL RA +L EA   +  M ++PTAEVW ALL AC+ H N EL E+ AK L +LD  + G
Sbjct: 673 DLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSG 732

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
            Y+L++ ++A + K  D  QVR  MR  G+KK PG SW+E+ NK+H F A D SH +   
Sbjct: 733 GYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIA 792

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
           I +KL E+ EK       +AQ  +V       E ++    HSE+LA+A+G++       I
Sbjct: 793 IREKLDELMEK-------IAQLGYV-----RTESLRSEIHHSEKLAVAFGIMNLPAWMPI 840

Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            I KNLR+C DCH+  KL+S + GRE V+RDA RFHHF+ G CSCGDYW
Sbjct: 841 HIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 182/657 (27%), Positives = 326/657 (49%), Gaps = 71/657 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFT 60
           Y K GS+ DAE+LF ++ +R V +WN ++  Y  +G  L  +E++  MR  G S+ +AFT
Sbjct: 105 YAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFT 164

Query: 61  FPCVIKACAMLK-------------------DLDCGAKIHGLVLKCGY------------ 89
           F C +K+C  L                    D D    I  + ++CG             
Sbjct: 165 FGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIE 224

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
             T F  NS++A YAK Y    A +LF+ M E+ DVV WN ++SA S SG+  EAL +  
Sbjct: 225 RPTVFCRNSMLAGYAKSYGVDHALELFESMPER-DVVSWNMMVSALSQSGRAREALSVAV 283

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +M   G+  ++ T+ ++L AC   S    G ++HA  ++S   +  YVA+A++ +YA+CG
Sbjct: 284 DMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCG 343

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
              EA  V   L ++++VSW  ++ GF+Q   + ++++ F +++      DQ      +S
Sbjct: 344 CFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIIS 403

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
                 ++   ++LH+ ++K G    + I N+L+ MYAKC  +     +F  M  +D +S
Sbjct: 404 GCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVS 463

Query: 330 WTTIIAGYAQNNCHLKALELF-----RTV---------------QLEGLD---------- 359
           WT ++  Y+Q     KA E F     R V               + +GL           
Sbjct: 464 WTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKD 523

Query: 360 --ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
              D +   ++   C+ +       +I G+ ++ GL  D  ++NA++ +Y KCG I  +R
Sbjct: 524 VIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEAR 583

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F+ +  KD+VSW +MI+ Y  +G+  +A+E+F  M +   + D I+ V+ LS+ S   
Sbjct: 584 KIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSG 643

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTS 533
           ++++GK     ++++  N+   +   S +VD+ AR G L  A  + + +  K    +W +
Sbjct: 644 LVQEGK-FYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGA 702

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           +++A   HG  ++A +L  K   +  +PD   ++ L    + +G   +  +  ++MR
Sbjct: 703 LLSACKTHGNNELA-ELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMR 758



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 230/515 (44%), Gaps = 68/515 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYV-------------------------- 34
           M+ +CG+V  A + F ++ + TVF  N+ML  Y                           
Sbjct: 206 MFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMM 265

Query: 35  -----SNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                 +G     L     M   G+ +D+ T+   + ACA L  L  G ++H  V++   
Sbjct: 266 VSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLP 325

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
               ++ +++V +YAKC  F++AR++F  + ++ + V W  +I  +   G   E+L LF 
Sbjct: 326 CIDPYVASAMVELYAKCGCFKEARRVFSSLRDR-NTVSWTVLIGGFLQYGCFSESLELFN 384

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +M+   +  + +     +  C +     L  ++H+ ++KSG    V ++N+LI+MYA+CG
Sbjct: 385 QMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCG 444

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL----------------- 252
            +  A  +   +E +D VSW  MLT + Q     KA +FF  +                 
Sbjct: 445 NLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQ 504

Query: 253 QGAGQK---------------PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            GA +                PD V  V        +G    G ++  + +K G + D  
Sbjct: 505 HGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTS 564

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N ++ MY+KC  ++   ++F  ++ +D +SW  +I GY+Q+    +A+E+F  +  +G
Sbjct: 565 VMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKG 624

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYS 415
              D +   +VL +CS    + + K     + R       L   + +VD+  + GN+  +
Sbjct: 625 AKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEA 684

Query: 416 RNVFESIESKDVVS-WTSMISSYVHNGLANEALEL 449
           +N+ + +  K     W +++S+   +G  NE  EL
Sbjct: 685 KNLIDEMPMKPTAEVWGALLSACKTHG-NNELAEL 718


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 270/771 (35%), Positives = 441/771 (57%), Gaps = 19/771 (2%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           +DL+   +IH  +   G  S + F+ N +V  Y KC     AR  FD +  K D   W S
Sbjct: 38  QDLESVRQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYS-WGS 94

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL--GMEIHAA-TV 187
           +++AY+ +G    AL L++ M    L  N   +   L AC  +S E L  G  IH+  + 
Sbjct: 95  MLTAYAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGAC--ASIEALEEGKAIHSRISG 149

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTGFVQNDLYCKAM 246
             G  L V + N+L+ MYA+CG + +A  +  ++  + SVS WN+M+  + Q+  + +A+
Sbjct: 150 TKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAI 209

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
           + + ++     +P      + +SA   LG L  G+++HA    +G   DL + N L+ MY
Sbjct: 210 RLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMY 266

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
           A+C C++   ++F ++  +D +SW+ +IA +A+ +   +A+E +  +QLEG+  +     
Sbjct: 267 ARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFA 326

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           SVL+AC+ +  +   + +H  I+  G    LV   A+VD+Y   G++D +R++F+ IE++
Sbjct: 327 SVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENR 386

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLM-NEANVESDSITLVSALSAASSLSILKKGKEL 484
           D   WT +I  Y   G     LEL+  M N   V +  I     +SA +SL      ++ 
Sbjct: 387 DEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQA 446

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +  I   G   +  +A+SLV+MY+R G L+ A +VF+ + ++D + WT++I     HG  
Sbjct: 447 HSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEH 506

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC 604
            +A+ L+ +ME E   P  +TF+ +LYACSH+GL  +GK+    ++ DY + P   HY+C
Sbjct: 507 GLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSC 566

Query: 605 LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGN 664
           ++DLL RA  L +A + + +M +EP    W +LLGA R+H + +     A ++ +LDP +
Sbjct: 567 IIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVD 626

Query: 665 PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSES 724
           P +YVL+SNV A +     +  VR  M   G+KK  GSSWIE+ ++IH F   D SH   
Sbjct: 627 PASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRF 686

Query: 725 DEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGS 784
            EI+ +L  ++ K+ +E GYV +++ VLH+V E+EK  +L  HSE+LAIA+G++ +  G+
Sbjct: 687 QEIFAELQRLSPKI-KEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGT 745

Query: 785 LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +RI   LR+C DCHS  K +S +  RE++VRD++RFH F  G CSCGDYW
Sbjct: 746 TLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796



 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 169/548 (30%), Positives = 296/548 (54%), Gaps = 17/548 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YGKCGSV  A   FD ++++  ++W +ML AY  NG     L+ Y RM    +  +   +
Sbjct: 68  YGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVY 124

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMG 120
             V+ ACA ++ L+ G  IH  +        D I+ NSL+ MYAKC     A++LF+RM 
Sbjct: 125 TTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMS 184

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  V  WN++I+AY+ SG   EA+ L+ +M    +  +  TF + L AC +      G 
Sbjct: 185 GRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGR 241

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA     G  L + + NAL+ MYARC  + +AA +  +L  +D VSW++M+  F + D
Sbjct: 242 KIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD 301

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L+ +A++F+ ++Q  G +P+     + + A   +G+L  G+ +H   +  G+   L  G 
Sbjct: 302 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGT 361

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-LEGLD 359
            L+D+Y     ++    +F Q+  +D   WT +I GY++       LEL+R ++    + 
Sbjct: 362 ALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVP 421

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
           A  +I   V+ AC+ L   +  ++ H  I   G+ SD V+  ++V++Y + GN++ +R V
Sbjct: 422 ATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQV 481

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ + S+D ++WT++I+ Y  +G    AL L+  M     E   +T +  L A S   + 
Sbjct: 482 FDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQ 541

Query: 479 KKGKELNGFI-IRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNC--VQTKDLILWTS 533
           ++GK+L  FI I+  + +  ++A  S ++D+ +R G L  A ++ N   V+  D + W+S
Sbjct: 542 EQGKQL--FISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPND-VTWSS 598

Query: 534 MINANGLH 541
           ++ A+ +H
Sbjct: 599 LLGASRIH 606



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 238/450 (52%), Gaps = 18/450 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVS-QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KCGS+ DA++LF+++S +R+V +WNAM+ AY  +G     +  Y  M V        
Sbjct: 166 MYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDV---EPSVR 222

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  V+ AC+ L  LD G KIH L+   G +    + N+L+ MYA+C     A ++F R+
Sbjct: 223 TFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRL 282

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + DVV W+++I+A++ +    EA+  + +MQ  G+  N YTF + L AC        G
Sbjct: 283 -PRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAG 341

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   + +G  + +    AL+ +Y   G + EA  +  Q+EN+D   W  ++ G+ + 
Sbjct: 342 RAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ 401

Query: 240 DLYCKAMQFFRELQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                 ++ +RE++   + P  ++     +SA   LG   + ++ H+     G +SD  +
Sbjct: 402 GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVL 461

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             +L++MY++   +    +VF +M+++D ++WTT+IAGYA++  H  AL L++ ++LEG 
Sbjct: 462 ATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGA 521

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           +   +    VL ACS      Q K++       Y +   ++     + I+D+  + G + 
Sbjct: 522 EPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAH---YSCIIDLLSRAGRLS 578

Query: 414 YSRNVFES--IESKDVVSWTSMI-SSYVHN 440
            +  +  +  +E  D V+W+S++ +S +H 
Sbjct: 579 DAEELINAMPVEPND-VTWSSLLGASRIHK 607


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 270/794 (34%), Positives = 444/794 (55%), Gaps = 6/794 (0%)

Query: 41  RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV 100
           R +     M  L I V+   +  +I+ C   +    G++++  V       +  + N+L+
Sbjct: 89  RAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALL 148

Query: 101 AMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
           +M+ +  +   A  +F RM EK ++  WN ++  Y+ +G   EAL L+  M  VG+  + 
Sbjct: 149 SMFVRFGNLVDAWYVFGRM-EKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDV 207

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
           YTF   L+ C        G EIH   ++ G    V V NALI MY +CG +  A  V  +
Sbjct: 208 YTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDK 267

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           + N+D +SWN+M++G+ +N +  + ++ F  +      PD +   + ++A   LG+   G
Sbjct: 268 MPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLG 327

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           +++H Y ++  F  D  I N+L+ MY+    +     VF +   +D +SWT +I+GY   
Sbjct: 328 RQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENC 387

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
               KALE ++ ++ EG+  D + I  VL ACS L  +     +H    +KGL S  ++ 
Sbjct: 388 LMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVA 447

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N+++D+Y KC  ID +  +F S   K++VSWTS+I     N    EAL  F  M    ++
Sbjct: 448 NSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIR-RLK 506

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            +S+TLV  LSA + +  L  GKE++   +R G + +G + ++++DMY RCG ++ A K 
Sbjct: 507 PNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQ 566

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  V   ++  W  ++      G+G  A +LF +M   + +P+ +TF+++L ACS SG++
Sbjct: 567 FFSVD-HEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMV 625

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
            EG ++   M+  Y + P  +HYAC+VDLLGR+  LEEAY+F++ M ++P   VW ALL 
Sbjct: 626 AEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLN 685

Query: 640 ACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           +CR+H + ELGE+ A+ + + D  + G Y+L+SN++A + KW  V +VR  MR +GL   
Sbjct: 686 SCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVD 745

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG SW+E+   +H+F++ D  H +  EI   L    +K++  G    ++  +  ++ E  
Sbjct: 746 PGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVEGPESSHM--DIMEAS 803

Query: 760 KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDAN 819
           K  +  GHSERLAI +G++ S  G  I +TKNL +C  CH+  K +SR   RE+ VRDA 
Sbjct: 804 KADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFISREVRREISVRDAE 863

Query: 820 RFHHFEAGVCSCGD 833
           +FHHF+ G+CSC D
Sbjct: 864 QFHHFKGGICSCTD 877



 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 183/578 (31%), Positives = 316/578 (54%), Gaps = 11/578 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ + G+++DA  +F ++ +R +F+WN ++G Y   G     L+ Y RM  +G+  D +T
Sbjct: 150 MFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYT 209

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV++ C  + +L  G +IH  V++ G++S   +VN+L+ MY KC D   AR +FD+M 
Sbjct: 210 FPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMP 269

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D + WN++IS Y  +G CLE L LF  M +  +  +  T  + + ACE    + LG 
Sbjct: 270 NR-DRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGR 328

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +++       + N+LI MY+  G + EA  V  + E +D VSW +M++G+    
Sbjct: 329 QIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCL 388

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +  KA++ ++ ++  G  PD++     +SA   L NL  G  LH  A ++G VS   + N
Sbjct: 389 MPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVAN 448

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMYAKC C++    +F+    ++ +SWT+II G   NN   +AL  FR + +  L  
Sbjct: 449 SLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM-IRRLKP 507

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           + + +  VL AC+ +  ++  KEIH + +R G+S D  + NAI+D+Y +CG ++Y+   F
Sbjct: 508 NSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQF 567

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            S++  +V SW  +++ Y   G    A ELF  M E+NV  + +T +S L A S   ++ 
Sbjct: 568 FSVD-HEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVA 626

Query: 480 KGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           +G E  N    +          + +VD+  R G L+ A +    +  K D  +W +++N+
Sbjct: 627 EGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNS 686

Query: 538 NGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
             +H     G++A +  ++ +  S    +   L+ LYA
Sbjct: 687 CRIHHHVELGELAAENIFQDDTTSVG--YYILLSNLYA 722



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 261/512 (50%), Gaps = 7/512 (1%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           NS I      G    A+     M  + +      +VA ++ CE       G  +++    
Sbjct: 75  NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSI 134

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
           S  +L + + NAL++M+ R G + +A  V  ++E ++  SWN ++ G+ +  L+ +A+  
Sbjct: 135 SMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDL 194

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           +  +   G KPD       +   G + NL+ G+E+H + I+ GF SD+ + N L+ MY K
Sbjct: 195 YHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVK 254

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  VN    VF +M  +D ISW  +I+GY +N   L+ L LF  +    +D D+M + SV
Sbjct: 255 CGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSV 314

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           + AC  L      ++IHGY++R     D  I N+++ +Y   G I+ +  VF   E +D+
Sbjct: 315 ITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDL 374

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           VSWT+MIS Y +  +  +ALE + +M    +  D IT+   LSA S L  L  G  L+  
Sbjct: 375 VSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEV 434

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
             +KG      VA+SL+DMYA+C  +D A ++F+    K+++ WTS+I    ++ R   A
Sbjct: 435 AKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEA 494

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLV 606
           +  F +M      P+ +T + +L AC+  G +  GK+     +R     D +  +   ++
Sbjct: 495 LFFFREM-IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPN--AIL 551

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           D+  R   +E A++   S+  E T+  W  LL
Sbjct: 552 DMYVRCGRMEYAWKQFFSVDHEVTS--WNILL 581


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 265/768 (34%), Positives = 435/768 (56%), Gaps = 14/768 (1%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           +DL+   +IH  +   G  S + F+ N +V  Y KC     AR  FD +  K D   W S
Sbjct: 38  QDLESVRQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYS-WGS 94

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS- 189
           +++AY+ +G    AL L++ M    L  N   +   L AC        G  IH+    + 
Sbjct: 95  MLTAYAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTK 151

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G  L V + N+L+ MYA+CG + +A  +  ++  +   SWN+M+  + Q+  + +A++ +
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLY 211

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            ++     +P      + +SA   LG L  G+++HA    +G   DL + N L+ MYA+C
Sbjct: 212 EDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARC 268

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
            C++   ++F ++  +D +SW+ +IA +A+ +   +A+E +  +QLEG+  +     SVL
Sbjct: 269 KCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVL 328

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
           +AC+ +  +   + +H  I+  G    LV   A+VD+Y   G++D +R++F+ IE++D  
Sbjct: 329 LACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEG 388

Query: 429 SWTSMISSYVHNGLANEALELFYLM-NEANVESDSITLVSALSAASSLSILKKGKELNGF 487
            WT +I  Y   G     LEL+  M N   V +  I     +SA +SL      ++ +  
Sbjct: 389 LWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSD 448

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
           I   G   +  +A+SLV+MY+R G L+ A +VF+ + ++D + WT++I     HG   +A
Sbjct: 449 IEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLA 508

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           + L+ +ME E   P  +TF+ +LYACSH+GL  +GK+    ++ DY + P   HY+C++D
Sbjct: 509 LGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIID 568

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
           LL RA  L +A + + +M +EP    W +LLGA R+H + +     A ++ +LDP +P +
Sbjct: 569 LLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPAS 628

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
           YVL+SNV A +     +  VR  M   G+KK  GSSWIE+ ++IH F   D SH    EI
Sbjct: 629 YVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEI 688

Query: 728 YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIR 787
           + +L  ++ K+ +E GYV +++ VLH+V E+EK  +L  HSE+LAIA+G++ +  G+ +R
Sbjct: 689 FAELQRLSPKI-KEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLR 747

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           I   LR+C DCHS  K +S +  RE++VRD++RFH F  G CSCGDYW
Sbjct: 748 IFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 170/548 (31%), Positives = 296/548 (54%), Gaps = 18/548 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YGKCGSV  A   FD ++++  ++W +ML AY  NG     L+ Y RM    +  +   +
Sbjct: 68  YGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVY 124

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMG 120
             V+ ACA +K L+ G  IH  +        D I+ NSL+ MYAKC     A++LF+RM 
Sbjct: 125 TTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMS 184

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  V  WN++I+AY+ SG   EA+ L+ +M    +  +  TF + L AC +      G 
Sbjct: 185 GRS-VSSWNAMIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGR 240

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA     G  L + + NAL+ MYARC  + +AA +  +L  +D VSW++M+  F + D
Sbjct: 241 KIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD 300

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L+ +A++F+ ++Q  G +P+     + + A   +G+L  G+ +H   +  G+   L  G 
Sbjct: 301 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGT 360

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-LEGLD 359
            L+D+Y     ++    +F Q+  +D   WT +I GY++       LEL+R ++    + 
Sbjct: 361 ALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVP 420

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
           A  +I   V+ AC+ L   +  ++ H  I   G+ SD V+  ++V++Y + GN++ +R V
Sbjct: 421 ATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQV 480

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ + S+D ++WT++I+ Y  +G    AL L+  M     E   +T +  L A S   + 
Sbjct: 481 FDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQ 540

Query: 479 KKGKELNGFI-IRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNC--VQTKDLILWTS 533
           ++GK+L  FI I+  + +  ++A  S ++D+ +R G L  A ++ N   V+  D + W+S
Sbjct: 541 EQGKQL--FISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPND-VTWSS 597

Query: 534 MINANGLH 541
           ++ A+ +H
Sbjct: 598 LLGASRIH 605



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 237/449 (52%), Gaps = 17/449 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA++LF+++S R+V +WNAM+ AY  +G     +  Y  M V        T
Sbjct: 166 MYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDV---EPSVRT 222

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC+ L  LD G KIH L+   G +    + N+L+ MYA+C     A ++F R+ 
Sbjct: 223 FTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRL- 281

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV W+++I+A++ +    EA+  + +MQ  G+  N YTF + L AC        G 
Sbjct: 282 PRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGR 341

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   + +G  + +    AL+ +Y   G + EA  +  Q+EN+D   W  ++ G+ +  
Sbjct: 342 AVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQG 401

Query: 241 LYCKAMQFFRELQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                ++ +RE++   + P  ++     +SA   LG   + ++ H+     G +SD  + 
Sbjct: 402 HRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLA 461

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            +L++MY++   +    +VF +M+++D ++WTT+IAGYA++  H  AL L++ ++LEG +
Sbjct: 462 TSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAE 521

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
              +    VL ACS      Q K++       Y +   ++     + I+D+  + G +  
Sbjct: 522 PSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAH---YSCIIDLLSRAGRLSD 578

Query: 415 SRNVFES--IESKDVVSWTSMI-SSYVHN 440
           +  +  +  +E  D V+W+S++ +S +H 
Sbjct: 579 AEELINAMPVEPND-VTWSSLLGASRIHK 606


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 271/801 (33%), Positives = 459/801 (57%), Gaps = 7/801 (0%)

Query: 35  SNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF 94
           +NG+    ++  + M+ L ++VD   F  +++ C   +  + G+K++ + L      +  
Sbjct: 71  ANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVE 130

Query: 95  IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV 154
           + N+ +AM+ +  +   A  +F +M E+ ++  WN ++  Y+  G   EA+ L+  M  V
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSER-NLFSWNVLVGGYAKQGYFDEAICLYHRMLWV 189

Query: 155 GLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
           G V  + YTF   L+ C        G E+H   V+ G  L + V NALI MY +CG +  
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +  ++  +D +SWN+M++G+ +N +  + ++ F  ++G    PD +   + +SA   
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACEL 309

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           LG+   G+++HAY I  GF  D+ + N+L  MY          ++F +M  +D +SWTT+
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTM 369

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           I+GY  N    KA++ +R +  + +  D + + +VL AC+ L  +    E+H   I+  L
Sbjct: 370 ISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429

Query: 394 -SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
            S +++ N ++++Y KC  ID + ++F +I  K+V+SWTS+I+    N    EAL +F+ 
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFFR 488

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
             +  ++ ++ITL +AL+A + +  L  GKE++  ++R G  L+  + ++L+DMY RCG 
Sbjct: 489 QMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGR 548

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           ++IA   FN  Q KD+  W  ++      G+G V ++LF +M      PD ITF++LL  
Sbjct: 549 MNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCG 607

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           C  S ++ +G  +   M  +Y + P  +HYAC+VDLLGRA  L+EA++F++ M + P   
Sbjct: 608 CGKSQMVRQGLMYFSKME-EYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA 666

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           VW ALL ACR+H N +LGE+ A+++ ELD G+ G Y+L+ N++A   KW++V +VR  M+
Sbjct: 667 VWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMK 726

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
            +GL    G SW+E+  K+H+F++ DK H ++ EI   L    EK+  E G    ++   
Sbjct: 727 ENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMS-EVGLTTSSESSS 785

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
            +  E  + ++  GHSER AIA+G++ S  G  I +TKNL +C  CH   K +S+   RE
Sbjct: 786 MDETEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKTVRRE 845

Query: 813 LVVRDANRFHHFEAGVCSCGD 833
           + VRD+  FHHF+ G CSCGD
Sbjct: 846 ISVRDSEHFHHFKDGECSCGD 866



 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 181/544 (33%), Positives = 301/544 (55%), Gaps = 6/544 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
           M+ + G+++DA  +F K+S+R +F+WN ++G Y   G     +  Y RM  V G+  D +
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVY 197

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFPCV++ C  + DL  G ++H  V++ GY+    +VN+L+ MY KC D + AR LFDRM
Sbjct: 198 TFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + D++ WN++IS Y  +G   E L LF  M+ + +  +  T  + + ACE      LG
Sbjct: 258 -PRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IHA  + +G  + + V N+L  MY   G   EA  +  +++ KD VSW +M++G+  N
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYN 376

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L  KA+  +R +     KPD++     +SA   LG+L  G ELH  AIK   +S + + 
Sbjct: 377 FLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L++MY+KC C++    +F+ +  ++ ISWT+IIAG   NN   +AL  FR +++  L 
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQ 495

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            + + + + L AC+ +  +   KEIH +++R G+  D  + NA++D+Y +CG ++ + N 
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQ 555

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F S + KDV SW  +++ Y   G  +  +ELF  M +A V  D IT +S L       ++
Sbjct: 556 FNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMV 614

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINA 537
           ++G      +   G        + +VD+  R G L  A+K    +  T D  +W +++NA
Sbjct: 615 RQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674

Query: 538 NGLH 541
             +H
Sbjct: 675 CRIH 678


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 245/626 (39%), Positives = 398/626 (63%), Gaps = 12/626 (1%)

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
            +  D  SWNS++    +    C++++ F  ++    KP++     A+ +   L +L +G
Sbjct: 42  FDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSG 101

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K+ H  A+  GF SDL + + L+DMY+KC  ++    +F ++  ++ ++WT++I GY QN
Sbjct: 102 KQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQN 161

Query: 341 NCHLKALELFRTVQLE---------GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
           +   +AL +F+    E         G   D + + SVL ACS +   + ++ +HG  I+ 
Sbjct: 162 DDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKV 221

Query: 392 GLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           GL  ++ + N ++D Y KCG +  SR VF+ +  KDVVSW SMI+ Y  NGL+ +A E+F
Sbjct: 222 GLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVF 281

Query: 451 YLMNEANV-ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           + M +A   + + +TL + L A +    L+ G  L+  +I+ G+     +A+S++DMY +
Sbjct: 282 HGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCK 341

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CG  ++A   F+ ++ K++  WT+MI   G+HG  + A+D+FY+M      P++ITF+++
Sbjct: 342 CGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISV 401

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           L ACSH+G + EG ++   M  +Y ++P  EHY C+VDLLGRA +++EAY  ++SM++  
Sbjct: 402 LAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRR 461

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
              +W +LL ACR+H + EL EI A++L +LDP N G YVL++N++A + +WKDVE++R+
Sbjct: 462 DFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRI 521

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
            ++  GL K PG S +E+  ++H F+  DK H + ++IYK L E++ KL+ E GYV    
Sbjct: 522 LVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQ-EAGYVPNMA 580

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
            VLH+V+EEEK  ++  HSE+LA+A+GV+ S  GS I + KNLRVC DCH+  KL+S++ 
Sbjct: 581 SVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIV 640

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
            RE++VRDA RFHHF+ G+CSCGDYW
Sbjct: 641 SREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 244/442 (55%), Gaps = 17/442 (3%)

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           LF++  ++ DV  WNS+I+  +  G   E+L  F  M+++ +  N  TF  A+++C    
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G + H   +  G    ++V++ALI MY++CGK++ A  +  ++  ++ V+W S++T
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 235 GFVQNDLYCKAMQFFREL---------QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           G+VQND   +A+  F+E          +  G   D V  ++ +SA  R+ N    + +H 
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
            AIK G    + + NTL+D YAKC  V+   +VF  M  +D +SW ++IA YAQN     
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTD 276

Query: 346 ALELFR-TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIV 403
           A E+F   ++  G   + + + ++L+AC+    +     +H  +I+ G ++++++  +I+
Sbjct: 277 AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSII 336

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y KCG  + +RN F+ ++ K+V SWT+MI+ Y  +G A EAL++FY M  A V+ + I
Sbjct: 337 DMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYI 396

Query: 464 TLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVF 520
           T +S L+A S    L++G +  N   +   +N+E  V     +VD+  R G +  A  + 
Sbjct: 397 TFISVLAACSHAGFLEEGWRWFNA--MSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLI 454

Query: 521 NCVQT-KDLILWTSMINANGLH 541
             ++  +D +LW S++ A  +H
Sbjct: 455 KSMKVRRDFVLWGSLLAACRIH 476



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 223/440 (50%), Gaps = 21/440 (4%)

Query: 14  LFDKVSQRT-VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           LF+K   RT V++WN+++      G+    L  +S MR L I  +  TFPC IK+C+ L 
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           DL+ G + H   L  G++S  F+ ++L+ MY+KC     AR LFD +  + ++V W S+I
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEI-PRRNIVTWTSLI 155

Query: 133 SAYSASGQCLEALGLFREM---------QRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           + Y  +    EAL +F+E          + VG   ++   ++ L AC   S + +   +H
Sbjct: 156 TGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVH 215

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              +K G +  + V N L+  YA+CG+++ +  V   +  KD VSWNSM+  + QN L  
Sbjct: 216 GVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLST 275

Query: 244 KAMQFFRE-LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            A + F   L+  G K ++V     + A    G L  G  LH   IK G+V+++ +  ++
Sbjct: 276 DAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSI 335

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMY KC         F  M  ++  SWT +IAGY  +    +AL++F  +   G+  + 
Sbjct: 336 IDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNY 395

Query: 363 MIIGSVLMACSGLKCMSQ-----TKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
           +   SVL ACS    + +         H Y +  G+        +VD+ G+ G I  + N
Sbjct: 396 ITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEH---YGCMVDLLGRAGYIKEAYN 452

Query: 418 VFESIE-SKDVVSWTSMISS 436
           + +S++  +D V W S++++
Sbjct: 453 LIKSMKVRRDFVLWGSLLAA 472



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 170/361 (47%), Gaps = 39/361 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM---------RV 51
           MY KCG + +A  LFD++ +R + TW +++  YV N +    L  +              
Sbjct: 126 MYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEE 185

Query: 52  LGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
           +G SVD+     V+ AC+ + +      +HG+ +K G D    + N+L+  YAKC +   
Sbjct: 186 VGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSL 245

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQAC 170
           +R++FD M EK DVV WNS+I+ Y+ +G   +A  +F  M + G    N  T    L AC
Sbjct: 246 SRKVFDDMAEK-DVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLAC 304

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
                  +GM +H   +K G    V +A ++I MY +CG+   A      ++ K+  SW 
Sbjct: 305 AHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWT 364

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-----HA 285
           +M+ G+  +    +A+  F ++  AG KP+ +  ++ ++A    G L  G        H 
Sbjct: 365 AMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHE 424

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA----------QDFISWTTIIA 335
           Y ++ G           ++ Y   C V+ +GR  Y   A          +DF+ W +++A
Sbjct: 425 YNVEPG-----------VEHYG--CMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLA 471

Query: 336 G 336
            
Sbjct: 472 A 472


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 265/752 (35%), Positives = 424/752 (56%), Gaps = 6/752 (0%)

Query: 15  FDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM--RVLGISVDAFTFPCVIKACAMLK 72
             + +  +   WN ++  + + G+    +  Y +M       S DA T P V+K+CA L 
Sbjct: 96  LPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALG 155

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
            +  G  +H      G  +  ++ ++LV MYA       AR  FD + E+ D VLWN ++
Sbjct: 156 AMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPER-DCVLWNVMM 214

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
                +G    A+ LFR M+  G   N  T    L  C   +    G ++H+  VK G  
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLE 274

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
            +V VAN L+AMYA+C  + +A  +   +   D V+WN M++G VQN L+ +A   F ++
Sbjct: 275 PEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDM 334

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           Q +G +PD +  V+ + A   L  L  GKE+H Y ++     D+ + + L+D+Y KC  V
Sbjct: 335 QRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDV 394

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
                ++    A D +  +T+I+GY  N    +AL++FR +  + +  + + I SVL  C
Sbjct: 395 RMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGC 454

Query: 373 SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           + +  +   ++IHGY++R        + +A++D+Y KCG +D S  +F  +  KD V+W 
Sbjct: 455 ASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWN 514

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           SMISS+  NG   EAL+LF  M    ++ ++IT+ +ALSA +SL  +  GKE++G  I+ 
Sbjct: 515 SMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKG 574

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
               +    S+L+DMYA+CG L++A +VF  +  K+ + W S+I+A G HG  K ++ L 
Sbjct: 575 PIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLL 634

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
           + M+ E + PDH+TFLAL+ AC+H+GL+ EG +  + M   Y + P  EH+AC+VDL  R
Sbjct: 635 HGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSR 694

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
           +  L++A QF+  M  +P A +W ALL ACRVH N EL +I +++L +LDP N G YVL+
Sbjct: 695 SGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLM 754

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           SN+ A + +W  V +VR  M+ + + K PG SW+++ N  H F+A DKSH ES++IY  L
Sbjct: 755 SNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSL 814

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
             + ++L RE GYV +     H +  +   Q+
Sbjct: 815 KTLLQEL-REEGYVPRPDLC-HPMHPDNNTQV 844



 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 168/546 (30%), Positives = 299/546 (54%), Gaps = 8/546 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   G + +A   FD + +R    WN M+   +  G+    +  +  MR  G   +  T
Sbjct: 185 MYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFAT 244

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             C +  CA   DL  GA++H L +KCG +    + N+L+AMYAKC     A +LF+ M 
Sbjct: 245 LACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELM- 303

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            ++D+V WN +IS    +G  +EA GLF +MQR G   ++ T V+ L A  D +    G 
Sbjct: 304 PQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGK 363

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   V++  N+ V++ +AL+ +Y +C  +  A  +       D V  ++M++G+V N 
Sbjct: 364 EVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNG 423

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +  +A+Q FR L     KP+ V   + +     +  L  G+++H Y ++  +     + +
Sbjct: 424 MSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVES 483

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LMDMYAKC  ++    +F +M+ +D ++W ++I+ ++QN    +AL+LFR + +EG+  
Sbjct: 484 ALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKY 543

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           + + I + L AC+ L  +   KEIHG  I+  + +D+   +A++D+Y KCGN++ +  VF
Sbjct: 544 NNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVF 603

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  K+ VSW S+IS+Y  +GL  E++ L + M E   + D +T ++ +SA +   +++
Sbjct: 604 EFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVE 663

Query: 480 KGKELNGFIIRK---GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           +G +L   + +K      +E    + +VD+Y+R G LD A +    +  K D  +W +++
Sbjct: 664 EGVQLFQCMTKKYLIAPRMEHF--ACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALL 721

Query: 536 NANGLH 541
           +A  +H
Sbjct: 722 HACRVH 727



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 240/490 (48%), Gaps = 13/490 (2%)

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG---QNLQVYVANALIAM 204
           F     V  V++A   +A L+ C  +    LG++IHA  V SG    +  + +   L+ M
Sbjct: 20  FSATAAVTDVSSADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGM 79

Query: 205 YARCGKMTEAAGVLYQLEN---KDSVSWNSMLTGFVQNDLYCKAMQFFREL--QGAGQKP 259
           Y    +  +A  V   L       S+ WN ++ GF     +  A+ F+ ++    A   P
Sbjct: 80  YVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSP 139

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D       V +   LG +  G+ +H  A   G  +D+ +G+ L+ MYA    +      F
Sbjct: 140 DAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAF 199

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
             +  +D + W  ++ G  +      A+ LFR ++  G + +   +   L  C+    + 
Sbjct: 200 DGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLL 259

Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
              ++H   ++ GL  ++ + N ++ +Y KC  +D +  +FE +   D+V+W  MIS  V
Sbjct: 260 SGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCV 319

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NGL  EA  LFY M  +    DSITLVS L A + L+ LK+GKE++G+I+R   N++  
Sbjct: 320 QNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVF 379

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           + S+LVD+Y +C  + +A  +++  +  D+++ ++MI+   L+G  + A+ +F  +  + 
Sbjct: 380 LVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQC 439

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLE- 616
             P+ +T  ++L  C+    +  G++    ++R  Y+   + E  + L+D+  +   L+ 
Sbjct: 440 IKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVE--SALMDMYAKCGRLDL 497

Query: 617 EAYQFVRSMQ 626
             Y F++  Q
Sbjct: 498 SHYIFLKMSQ 507


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 281/792 (35%), Positives = 440/792 (55%), Gaps = 10/792 (1%)

Query: 52  LGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
           LG+ +D+ T+  +++       L  G   H  ++K  +    F++N+L+ MY KC +   
Sbjct: 13  LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A++LFDRM  K +VV WNS+IS Y+  G   E + LF+E +   L  + +TF  AL  C 
Sbjct: 73  AKKLFDRM-PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCG 131

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            +    LG  IHA    SG    V + N+LI MY +CG++  A  V    +  DSVSWNS
Sbjct: 132 RTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNS 191

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR--LGNLLNGKELHAYAIK 289
           ++ G+V+     + ++   ++   G   +     +A+ A G     ++  GK LH  A+K
Sbjct: 192 LIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVK 251

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ-----NNCHL 344
            G   D+ +G  L+D YAK   +    ++F  M   + + +  +IAG+ Q     +    
Sbjct: 252 LGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFAN 311

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIV 403
           +A+ LF  +Q  G+        S+L ACS ++     K+IH  I +  L SD  I NA+V
Sbjct: 312 EAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALV 371

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           ++Y   G+I+     F S    DVVSWTS+I  +V NG     L LF+ +  +  + D  
Sbjct: 372 ELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEF 431

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T+   LSA ++L+ +K G++++ + I+ G      + +S + MYA+CG +D AN  F   
Sbjct: 432 TISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKET 491

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           +  D++ W+ MI++N  HG  K A+DLF  M+    AP+HITFL +L ACSH GL+ EG 
Sbjct: 492 KNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGL 551

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRV 643
           ++ EIM+ D+ + P  +H AC+VDLLGRA  L EA  F+     E    +W +LL ACRV
Sbjct: 552 RYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRV 611

Query: 644 HSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
           H   + G+ VA++++EL+P    +YVL+ N++  +       ++R  M+  G+KK PG S
Sbjct: 612 HKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLS 671

Query: 704 WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
           WIE+GN +HSF+A D+SH  S  IY +L E+ E++++   Y+ +      +  + +   M
Sbjct: 672 WIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKL-DYIDEKLVSDASEPKHKDNSM 730

Query: 764 LYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHH 823
           +  HSE+LA+ +G++     + +R+ KNLR C  CH   KL SRL  RE+++RD  RFH 
Sbjct: 731 VSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHR 790

Query: 824 FEAGVCSCGDYW 835
           F  G CSCGDYW
Sbjct: 791 FRDGSCSCGDYW 802



 Score =  281 bits (720), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 181/575 (31%), Positives = 291/575 (50%), Gaps = 18/575 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG    A++LFD++ +R V +WN+++  Y   G    V+  +   R+  + +D FT
Sbjct: 63  MYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFT 122

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +  C    DL  G  IH L+   G      + NSL+ MY KC     AR +F+   
Sbjct: 123 FSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESAD 182

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED--SSFETL 178
           E  D V WNS+I+ Y   G   E L L  +M R GL  N+Y   +AL+AC    SS    
Sbjct: 183 EL-DSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIEC 241

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  +H   VK G +L V V  AL+  YA+ G + +A  +   + + + V +N+M+ GF+Q
Sbjct: 242 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 301

Query: 239 -----NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
                ++   +AM  F E+Q  G KP +    + + A   +     GK++HA   K    
Sbjct: 302 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ 361

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           SD  IGN L+++Y+    +    + F+     D +SWT++I G+ QN      L LF  +
Sbjct: 362 SDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL 421

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNI 412
              G   D   I  +L AC+ L  +   ++IH Y I+ G+ +  I+ N+ + +Y KCG+I
Sbjct: 422 LFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDI 481

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D +   F+  ++ D+VSW+ MISS   +G A EA++LF LM  + +  + IT +  L A 
Sbjct: 482 DSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVAC 541

Query: 473 SSLSILKKGKELNGF-IIRKGFNLEGSVASS--LVDMYARCGALDIANK-VFNCVQTKDL 528
           S   ++++G  L  F I++K   +  +V  S  +VD+  R G L  A   + +     D 
Sbjct: 542 SHGGLVEEG--LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDP 599

Query: 529 ILWTSMINANGLH---GRGKVAIDLFYKMEAESFA 560
           ++W S+++A  +H     GK   +   ++E E+ A
Sbjct: 600 VMWRSLLSACRVHKATDTGKRVAERVIELEPEAAA 634


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 251/679 (36%), Positives = 405/679 (59%), Gaps = 4/679 (0%)

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           + A + L++L  G  IH  ++  G  +   +  SL+ +Y  C+ F+ A+ +F  +    D
Sbjct: 203 VTAGSALEEL-LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLD 261

Query: 125 VVLWNSIISAYSASGQCLEALGLF-REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           + LWN +++A + +   +E L +F R +    L  +A+T+ + L+AC        G  +H
Sbjct: 262 ITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVH 321

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              +KSG  + V V ++ + MYA+C    +A  +  ++  +D  SWN++++ + Q+    
Sbjct: 322 THVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPE 381

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           KA++ F E++ +G KPD V     +S+  RL +L  GKE+H   ++ GF  D  + + L+
Sbjct: 382 KALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALV 441

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMY KC C+     VF Q+  ++ +SW ++IAGY+        +ELFR +  EG+   + 
Sbjct: 442 DMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLT 501

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            + S+LMACS    +   K IHGYIIR  + +D+ + ++++D+Y KCGNI  + NVF+++
Sbjct: 502 TLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNM 561

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
              +VVSW  MIS YV  G   EAL +F  M +A V+ D+IT  S L A S L++L+KGK
Sbjct: 562 PKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGK 621

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           E++ FII     +   V  +L+DMYA+CGA+D A  +FN +  +D + WTSMI A G HG
Sbjct: 622 EIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHG 681

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
           +   A+ LF KM+     PD +TFLA+L ACSH+GL++EG  +   M  +Y   P  EHY
Sbjct: 682 QAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHY 741

Query: 603 ACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           +CL+DLLGR   L EAY+ + R+  I     +   L  AC +H   +LGE + + L+E D
Sbjct: 742 SCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKD 801

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
           P +P  Y+++SN++A+ +KW +V +VR++++  GLKK PG SWIE+G +IH F+  DKSH
Sbjct: 802 PDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSH 861

Query: 722 SESDEIYKKLAEITEKLER 740
            ++D IY+ ++ +   +E+
Sbjct: 862 PQADMIYECMSILASHVEK 880



 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 181/549 (32%), Positives = 291/549 (53%), Gaps = 7/549 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFT-WNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDA 58
           +Y  C     A+ +F  +      T WN ++ A   N   +  LE + R+     +  DA
Sbjct: 239 LYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDA 298

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           FT+P V+KAC+ L  +  G  +H  V+K G+     +++S V MYAKC  F  A +LFD 
Sbjct: 299 FTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDE 358

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M E+ DV  WN++IS Y   GQ  +AL LF EM+  G   ++ T    + +C        
Sbjct: 359 MPER-DVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLER 417

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G EIH   V+SG  L  +V++AL+ MY +CG +  A  V  Q++ K+ VSWNSM+ G+  
Sbjct: 418 GKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSL 477

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                  ++ FR +   G +P      + + A  R  NL  GK +H Y I+    +D+ +
Sbjct: 478 KGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFV 537

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            ++L+D+Y KC  +     VF  M   + +SW  +I+GY +   +L+AL +F  ++  G+
Sbjct: 538 NSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGV 597

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D +   SVL ACS L  + + KEIH +II   L  + V++ A++D+Y KCG +D + +
Sbjct: 598 KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALH 657

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  +  +D VSWTSMI++Y  +G A EAL+LF  M +++ + D +T ++ LSA S   +
Sbjct: 658 IFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGL 717

Query: 478 LKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT--KDLILWTSM 534
           + +G    N  I   GF       S L+D+  R G L  A ++        +D+ L +++
Sbjct: 718 VDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTL 777

Query: 535 INANGLHGR 543
            +A  LH +
Sbjct: 778 FSACHLHKK 786


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/690 (37%), Positives = 408/690 (59%), Gaps = 37/690 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IHA  +K+G +  ++  + LI   A  R G ++ A  +   +E  +   WNSM+ G   
Sbjct: 47  QIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSM 106

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A+ FF  +  +G +P+       + +  +L +   GK++HA+ +K GFVSD+ I
Sbjct: 107 SLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFI 166

Query: 299 GNTLMDMYAKCCCVN----------------------------YMGR---VFYQMTAQDF 327
             +L++MYA+   +N                            YM R   +F +M  +D 
Sbjct: 167 HTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDV 226

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW  +IAGYAQ     +AL LF  ++   +  +   I SVL AC+    +     +  +
Sbjct: 227 VSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSW 286

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           I  +GL S+L ++NA++D+Y KCG++  +R +F+ +  +DV+SW  MI  Y H     EA
Sbjct: 287 IEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEA 346

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL-VD 505
           L LF  M  + VE   IT +S L + + L  +  GK ++ +I  K FN   +  S+  +D
Sbjct: 347 LALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYI-NKNFNSVSTSLSTSLID 405

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           +YA+CG +  A +VF+ ++ K L  W +MI    +HG+   A +LF KM ++   P+ IT
Sbjct: 406 LYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEIT 465

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F+ +L AC H+GL++ G++F   M  DY++ P  +HY C++DLLGRA   EEA   +++M
Sbjct: 466 FVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNM 525

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
           +++P   +W +LLGACR H   ELGE+VA++L EL+P NPG YVL+SN++A + KW DV 
Sbjct: 526 EVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVA 585

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
           ++R R+   G+KK PG + IE+ N +H F+  DK H +S++IY+ L E+ E+L +  G+V
Sbjct: 586 RIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQL-KVFGFV 644

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
           A T  VL++++EE K   L  HSE+LAIA+G++ +  G+ IRI KNLRVC +CHS  KL+
Sbjct: 645 ADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLI 704

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S++F RE++ RD NRFHHF+ G CSC DYW
Sbjct: 705 SKIFNREIIARDRNRFHHFKDGSCSCNDYW 734



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 229/470 (48%), Gaps = 41/470 (8%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           + G +  A  LF+ + +  +F WN+M+     +  P   L  + RM   G+  +++TFP 
Sbjct: 75  RSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPF 134

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC------------YDFR- 110
           ++K+CA L     G +IH  VLK G+ S  FI  SL+ MYA+              +FR 
Sbjct: 135 LLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRD 194

Query: 111 ------------------KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
                             +ARQLFD M  K DVV WN++I+ Y+  G+  EAL LF +M+
Sbjct: 195 AISFTALIAGYALWGYMDRARQLFDEMPVK-DVVSWNAMIAGYAQMGRSKEALLLFEDMR 253

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
           +  +  N  T V+ L AC  S+   LG  + +     G    + + NALI MY++CG + 
Sbjct: 254 KANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQ 313

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
            A  +   +  +D +SWN M+ G+     Y +A+  FRE+  +G +P ++  ++ + +  
Sbjct: 314 TARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCA 373

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
            LG +  GK +HAY  K        +  +L+D+YAKC  +    +VF  M  +   SW  
Sbjct: 374 HLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNA 433

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC--SGLKCMSQ---TKEIHGY 387
           +I G A +    KA ELF  +  +G++ + +    +L AC  +GL  + Q   +  +  Y
Sbjct: 434 MICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDY 493

Query: 388 IIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
            I            ++D+ G+ G  + + ++ +++E K D   W S++ +
Sbjct: 494 KISPKSQH---YGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGA 540



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 147/293 (50%), Gaps = 1/293 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A QLFD++  + V +WNAM+  Y   G     L  +  MR   +  +  T 
Sbjct: 205 YALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTI 264

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA    LD G  +   +   G  S   +VN+L+ MY+KC D + AR+LFD M E
Sbjct: 265 VSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLE 324

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DV+ WN +I  Y+      EAL LFREM   G+     TF++ L +C       LG  
Sbjct: 325 R-DVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKW 383

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IHA   K+  ++   ++ +LI +YA+CG +  A  V   ++ K   SWN+M+ G   +  
Sbjct: 384 IHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQ 443

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
             KA + F ++   G +P+++  V  +SA    G +  G++  +  ++   +S
Sbjct: 444 ADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKIS 496



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 113/237 (47%), Gaps = 7/237 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A +LFD + +R V +WN M+G Y         L  +  M   G+     T
Sbjct: 305 MYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEIT 364

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ +CA L  +D G  IH  + K     +  +  SL+ +YAKC +   ARQ+FD M 
Sbjct: 365 FLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMK 424

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  +  WN++I   +  GQ  +A  LF +M   G+  N  TFV  L AC+ +    LG 
Sbjct: 425 IKS-LASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQ 483

Query: 181 EIHAATV---KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
           +  ++ V   K     Q Y    +I +  R G   EA  +L  +E K D   W S+L
Sbjct: 484 QFFSSMVQDYKISPKSQHY--GCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLL 538


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/758 (34%), Positives = 419/758 (55%), Gaps = 4/758 (0%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           KI   V+K G      + +SLV +Y KC   + ARQ+ + M   +DV  WN  +S+ ++ 
Sbjct: 10  KIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEM-PIQDVQQWNQKLSSANSP 68

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
               EA+ LF  M+   +  N + F + + A         G  IHA   K G    + ++
Sbjct: 69  YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           NA + MY +   +         +  ++  S N++L+GF   +   +  +   +L   G +
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P+    ++ +      G+L  GK +H   IK G   D  + N+L+++YAKC   NY  +V
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKV 248

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F ++  +D +SWT +I G+     +   L +F  +  EG + ++    S+L +CS L  +
Sbjct: 249 FGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 307

Query: 379 SQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
              K++H  I++  L  +  +  A+VD+Y K   ++ +  +F  +  +D+ +WT +++ Y
Sbjct: 308 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 367

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             +G   +A++ F  M    V+ +  TL S+LS  S ++ L  G++L+   I+ G + + 
Sbjct: 368 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDM 427

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            VAS+LVDMYA+CG ++ A  VF+ + ++D + W ++I     HG+G  A+  F  M  E
Sbjct: 428 FVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDE 487

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              PD +TF+ +L ACSH GLI EGKK    +   Y + P  EHYAC+VD+LGRA    E
Sbjct: 488 GTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHE 547

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
              F+  M++     +W  +LGAC++H N E GE  A KL EL+P    NY+L+SN+FAA
Sbjct: 548 VESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAA 607

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
              W DV  VR  M   G+KK PG SW+E+  ++H F++ D SH +  EI+ KL ++ +K
Sbjct: 608 KGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQK 667

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVD 797
           L    GY   T  VLHNV + EK ++L+ HSERLA+A+ +L ++    IRI KNLR+C D
Sbjct: 668 L-MSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGD 726

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CH F K +S +  +ELVVRD N FHHF+ G CSC ++W
Sbjct: 727 CHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 157/563 (27%), Positives = 282/563 (50%), Gaps = 8/563 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC S+  A Q+ +++  + V  WN  L +  S       ++ +  MR   I ++ F 
Sbjct: 33  VYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFI 92

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +I A A L D   G  IH  V K G++S   I N+ V MY K        Q F  M 
Sbjct: 93  FASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAM- 151

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             E++   N+++S +  +  C +   +  ++   G   N YTF++ L+ C        G 
Sbjct: 152 MIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGK 211

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +KSG N   ++ N+L+ +YA+CG    A  V  ++  +D VSW +++TGFV   
Sbjct: 212 AIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG 271

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            Y   ++ F ++   G  P+    ++ + +   L ++  GK++HA  +K     +  +G 
Sbjct: 272 -YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGT 330

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAK   +     +F ++  +D  +WT I+AGYAQ+    KA++ F  +Q EG+  
Sbjct: 331 ALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKP 390

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           +   + S L  CS +  +   +++H   I+ G S D+ + +A+VD+Y KCG ++ +  VF
Sbjct: 391 NEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVF 450

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + + S+D VSW ++I  Y  +G   +AL+ F  M +     D +T +  LSA S + +++
Sbjct: 451 DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIE 510

Query: 480 KGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDLILWTSMINA 537
           +GK+  N      G        + +VD+  R G   ++ + +     T ++++W +++ A
Sbjct: 511 EGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 570

Query: 538 NGLHGR---GKVAIDLFYKMEAE 557
             +HG    G+ A    +++E E
Sbjct: 571 CKMHGNIEFGERAAMKLFELEPE 593


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/678 (37%), Positives = 416/678 (61%), Gaps = 5/678 (0%)

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           N+ +F A+L   ++S+ +    +IH   V SG     ++   L+   +  G++  A  + 
Sbjct: 54  NSDSFYASL--IDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLF 111

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
            +    D   WN+++  + +N++Y   ++ +R ++  G  PD       + A   L +  
Sbjct: 112 DEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFG 171

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
               +H   IK GF SD+ + N L+ +YAKC  +     VF  +  +  +SWT+II+GYA
Sbjct: 172 LSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYA 231

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LV 397
           QN   ++AL +F  ++  G+  D + + S+L A + +  + Q + IHG++I+ GL D   
Sbjct: 232 QNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA 291

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           +L ++   Y KCG +  +++ F+ +++ +V+ W +MIS Y  NG A EA+ LF+ M   N
Sbjct: 292 LLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRN 351

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           ++ DS+T+ SA+ A++ +  L+  + ++ ++ +  +  +  V +SL+DMYA+CG+++ A 
Sbjct: 352 IKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFAR 411

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           +VF+    KD+++W++MI   GLHG+G  AI+L++ M+     P+ +TF+ LL AC+HSG
Sbjct: 412 RVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSG 471

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L+ EG +    M+ D+++ P  EHY+C+VDLLGRA +L EA  F+  + IEP   VW AL
Sbjct: 472 LVKEGWELFHCMK-DFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGAL 530

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           L AC+++    LGE  A KL  LDP N G+YV +SN++A+S  W  V  VR+ MR  GL 
Sbjct: 531 LSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLN 590

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K  G S IEI  K+ +F   DKSH  + EI+ +L  +  +L +E G+V  T+ VLH++  
Sbjct: 591 KDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRL-KEVGFVPYTESVLHDLNY 649

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           EEK + L  HSER+A+AYG++ +  G+ +RITKNLR CV+CHS  KL+S+L  RE++VRD
Sbjct: 650 EEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRD 709

Query: 818 ANRFHHFEAGVCSCGDYW 835
           ANRFHHF+ G+CSCGDYW
Sbjct: 710 ANRFHHFKDGLCSCGDYW 727



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/441 (32%), Positives = 231/441 (52%), Gaps = 19/441 (4%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A +LFD+     VF WNA++ +Y  N      +E Y  MR  G+  D FTFP V+
Sbjct: 102 GQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVL 161

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KAC  L D      IHG ++K G+ S  F+ N LVA+YAKC     A+ +FD +  +  +
Sbjct: 162 KACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRT-I 220

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V W SIIS Y+ +G+ +EAL +F +M+  G+  +    V+ L+A  D      G  IH  
Sbjct: 221 VSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGF 280

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
            +K G   +  +  +L A YA+CG +T A     Q++  + + WN+M++G+ +N    +A
Sbjct: 281 VIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEA 340

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           +  F  +     KPD V   +AV AS ++G+L   + +  Y  K  + SD+ +  +L+DM
Sbjct: 341 VNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDM 400

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL-DADVMI 364
           YAKC  V +  RVF + + +D + W+ +I GY  +    +A+ L+  ++  G+   DV  
Sbjct: 401 YAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTF 460

Query: 365 IGSVLMAC--SGLKCMSQTKEIHGYIIRKGLSDLVIL------NAIVDVYGKCGNIDYSR 416
           IG +L AC  SGL      KE  G+ +   + D  I+      + +VD+ G+ G +  + 
Sbjct: 461 IG-LLTACNHSGL-----VKE--GWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEAC 512

Query: 417 NVFESIESKDVVS-WTSMISS 436
                I  +  VS W +++S+
Sbjct: 513 AFIMKIPIEPGVSVWGALLSA 533



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 257/503 (51%), Gaps = 12/503 (2%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           +IH  ++  G     F++  LV   +       AR+LFD      DV +WN+II +YS +
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFC-YPDVFMWNAIIRSYSRN 132

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
               + + ++R M+  G+  + +TF   L+AC +     L   IH   +K G    V+V 
Sbjct: 133 NMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQ 192

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N L+A+YA+CG +  A  V   L ++  VSW S+++G+ QN    +A++ F +++  G K
Sbjct: 193 NGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVK 252

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           PD +  V+ + A   + +L  G+ +H + IK G   +  +  +L   YAKC  V      
Sbjct: 253 PDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSF 312

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F QM   + I W  +I+GYA+N    +A+ LF  +    +  D + + S ++A + +  +
Sbjct: 313 FDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSL 372

Query: 379 SQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
              + +  Y+ +    SD+ +  +++D+Y KCG+++++R VF+    KDVV W++MI  Y
Sbjct: 373 ELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGY 432

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL-- 495
             +G   EA+ L+++M +A V  + +T +  L+A +   ++K+G EL  F   K F +  
Sbjct: 433 GLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWEL--FHCMKDFEIVP 490

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLH---GRGKVAIDLF 551
                S +VD+  R G L  A      +  +  + +W ++++A  ++     G+ A +  
Sbjct: 491 RNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKL 550

Query: 552 YKMEAESFAPDHITFLALLYACS 574
           + ++   +   H   L+ LYA S
Sbjct: 551 FSLDP--YNTGHYVQLSNLYASS 571



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 176/356 (49%), Gaps = 12/356 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  A+ +FD +  RT+ +W +++  Y  NG+ +  L  +S+MR  G+  D   
Sbjct: 198 LYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIA 257

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +++A   + DL+ G  IHG V+K G +    ++ SL A YAKC     A+  FD+M 
Sbjct: 258 LVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQM- 316

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  +V++WN++IS Y+ +G   EA+ LF  M    +  ++ T  +A+ A        L  
Sbjct: 317 KTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQ 376

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +     KS     ++V  +LI MYA+CG +  A  V  +  +KD V W++M+ G+  + 
Sbjct: 377 WMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHG 436

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-HAYAIKQGFVSDLQIG 299
              +A+  +  ++ AG  P+ V  +  ++A    G +  G EL H        + D +I 
Sbjct: 437 QGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHC-------MKDFEI- 488

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
               + Y+  C V+ +GR  Y   A  FI    I  G +     L A +++R V L
Sbjct: 489 VPRNEHYS--CVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTL 542


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 249/627 (39%), Positives = 399/627 (63%), Gaps = 15/627 (2%)

Query: 223 NKDSV-SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
           +K SV SWNS++  F ++    +A+  F  ++     P++      + +   L +L  GK
Sbjct: 47  DKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGK 106

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           ++H  A   G+ SD+ + + L+DMY+KC  +N   ++F ++  ++ +SWT++I+GY QN 
Sbjct: 107 QIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNE 166

Query: 342 CHLKALELFRTVQL-----------EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
              +A+ LF+   L            G+  D +++G V+ AC+ +   S T+ +HG  ++
Sbjct: 167 RAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVK 226

Query: 391 KGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
           KG    L + N ++D Y KCG I  SR VF+ +E  DV SW S+I+ Y  NGL+ EA  L
Sbjct: 227 KGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSL 286

Query: 450 FY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           F  ++    V  +++TL + L A +    L+ GK ++  +++        V +S+VDMY 
Sbjct: 287 FSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYC 346

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           +CG +++A K F+ ++ K++  WT M+   G+HG GK A+ +FY+M      P++ITF++
Sbjct: 347 KCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVS 406

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L ACSH+GL+ EG  +   M+C++ ++P  EHY+C+VDLLGRA +L+EAY  ++ M+++
Sbjct: 407 VLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVK 466

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
           P   VW +LLGACR+H N ELGEI A+KL +LDP N G YVL+SN++A + +W DVE++R
Sbjct: 467 PDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMR 526

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
           + M+  GL KTPG S +E   ++H F+  DK H + ++IY+ L E+  KL+ E GY+   
Sbjct: 527 ILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQ-EVGYMPNV 585

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
             VL++V+ EEK  +L  HSE+LA+A+G++ S  GS+I+I KNLR+C DCH   KL+S++
Sbjct: 586 TSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKI 645

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
             RE+V+RD+ RFHHF+ G+CSCGDYW
Sbjct: 646 VNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 250/465 (53%), Gaps = 20/465 (4%)

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           R +F +  +K  V  WNSII+ ++ SG  L+AL  F  M+++ L  N  TF   +++C  
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
                 G +IH      G    ++VA+ALI MY++CG + +A  +  ++  ++ VSW SM
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158

Query: 233 LTGFVQNDLYCKAMQFFR-----------ELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
           ++G+VQN+   +A+  F+           E+ G G   D V     +SA  R+      +
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
            +H  A+K+GF   L +GNTLMD YAKC  ++   +VF  M   D  SW ++IA YAQN 
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278

Query: 342 CHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVIL 399
             ++A  LF  +   G +  + + + +VL+AC+    +   K IH  +++  L D LV+ 
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVG 338

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
            +IVD+Y KCG ++ +R  F+ ++ K+V SWT M++ Y  +G   EA+++FY M    ++
Sbjct: 339 TSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIK 398

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIAN 517
            + IT VS L+A S   +LK+G       ++  F++E  +   S +VD+  R G L  A 
Sbjct: 399 PNYITFVSVLAACSHAGLLKEGWHWFN-KMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAY 457

Query: 518 KVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAES 558
            +   ++ K D I+W S++ A  +H     G+++    +K++  +
Sbjct: 458 GLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSN 502



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 223/444 (50%), Gaps = 23/444 (5%)

Query: 12  EQLFDK-VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
             +F K V + +V++WN+++  +  +G+ L+ L  +S MR L +  +  TFPC IK+C+ 
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L DL  G +IH      GY S  F+ ++L+ MY+KC     AR+LFD + E+ +VV W S
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPER-NVVSWTS 157

Query: 131 IISAYSASGQCLEALGLFREMQRVG-----------LVTNAYTFVAALQACEDSSFETLG 179
           +IS Y  + +  EA+ LF+E   V            +  ++      + AC     +++ 
Sbjct: 158 MISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVT 217

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   VK G    + V N L+  YA+CG+++ +  V   +E  D  SWNS++  + QN
Sbjct: 218 ECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQN 277

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAV-SASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            L  +A   F ++   G+      T++AV  A    G L  GK +H   +K     +L +
Sbjct: 278 GLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVV 337

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G +++DMY KC  V    + F ++  ++  SWT ++AGY  +    +A+++F  +   G+
Sbjct: 338 GTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGI 397

Query: 359 DADVMIIGSVLMACSGLKCMSQ-----TKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
             + +   SVL ACS    + +      K    + +  G+      + +VD+ G+ G + 
Sbjct: 398 KPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEH---YSCMVDLLGRAGYLK 454

Query: 414 YSRNVFESIESK-DVVSWTSMISS 436
            +  + + ++ K D + W S++ +
Sbjct: 455 EAYGLIQEMKVKPDFIVWGSLLGA 478



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 180/358 (50%), Gaps = 31/358 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSN----------GEPLRVLET-YSRM 49
           MY KCG + DA +LFD++ +R V +W +M+  YV N           E L V ET Y  +
Sbjct: 130 MYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEI 189

Query: 50  RVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDF 109
             +G+ VD+    CVI ACA +        +HGL +K G++    + N+L+  YAKC + 
Sbjct: 190 VGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEI 249

Query: 110 RKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQ 168
             +R++FD M E+ DV  WNS+I+ Y+ +G  +EA  LF +M + G V  NA T  A L 
Sbjct: 250 SVSRKVFDGM-EETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLL 308

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           AC  S    +G  IH   VK      + V  +++ MY +CG++  A     +L+ K+  S
Sbjct: 309 ACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKS 368

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           W  M+ G+  +    +AM+ F E+   G KP+ +  V+ ++A    G L   KE   +  
Sbjct: 369 WTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLL---KEGWHWFN 425

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA----------QDFISWTTIIAG 336
           K     D++ G   ++ Y+  C V+ +GR  Y   A           DFI W +++  
Sbjct: 426 KMKCEFDVEPG---IEHYS--CMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGA 478


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/758 (36%), Positives = 436/758 (57%), Gaps = 22/758 (2%)

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           D+   + NSL+ MY+KC   R AR++FD M    D+V W ++    + +G   EAL L  
Sbjct: 76  DADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLG 135

Query: 150 EMQRVGLVTNAYTFVAALQAC-EDSSFETLGMEIHAATVKSG-QNLQVYVANALIAMYAR 207
           EM   GL  NA+T  AA  AC     F + G  +    +K+G     V V  ALI M+AR
Sbjct: 136 EMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFAR 195

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
            G +  A  V   L  +  V W  M+T +VQ     KA++ F  +   G +PD     + 
Sbjct: 196 NGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSM 255

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM---GRVFYQMTA 324
           VSA    G+   G++LH+  ++ G VSD  +   L+DMY K      M    +VF +M  
Sbjct: 256 VSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPT 315

Query: 325 QDFISWTTIIAGYAQ-----NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
            + +SWT +I+GY Q     NN    A+EL   +  E ++ + +   S+L AC+ L    
Sbjct: 316 HNVMSWTALISGYVQCGGQENN----AVELLCEMLNESIEPNHLTYSSLLKACANLSDQD 371

Query: 380 QTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             ++IH  +++  + ++ V+ NA+V +Y + G ++ +R  F+ +  ++++S +S I    
Sbjct: 372 SGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIG--- 428

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
             G +N +      +   +V   + T  S LSAA+++ +  KG++L+   I+ GF  +  
Sbjct: 429 ETGRSNASWS--SQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKG 486

Query: 499 VASSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
           +++SLV MY+RCG LD A + F+ ++   ++I WTS+I+A   HG  + A+ LF+ M   
Sbjct: 487 ISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILS 546

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              P+ +T++A+L ACSH GL+ EGK++   M+ D++L P  EHYAC+VDLL R+  ++E
Sbjct: 547 GVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQE 606

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           A +F+  M  +  A VW  LLGACR + N E+GEI A+ +++L+P +P  YVL+SN++A 
Sbjct: 607 ALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAH 666

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
              W +V ++R  MR   L K  G SW+ +GN IH F A D SH  + EIY KLA +  +
Sbjct: 667 GGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIRE 726

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVD 797
           + ++ GYV  T  VLH++ ++ K Q L  HSE++A+A+G++ +     IRI KNLRVC D
Sbjct: 727 I-KDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCAD 785

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CHS  K +S+  GRE+++RD+NRFH  + G CSCG+YW
Sbjct: 786 CHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 163/607 (26%), Positives = 296/607 (48%), Gaps = 30/607 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KCG V  A ++FD +   R + +W AM      NG     L     M   G+  +AF
Sbjct: 88  MYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAF 147

Query: 60  TFPCVIKACAMLKDL-DCGAKIHGLVLKCGYDSTDFIVN-SLVAMYAKCYDFRKARQLFD 117
           T      AC   +     G  + G  +K G+  TD  V  +L+ M+A+  D   AR++F+
Sbjct: 148 TLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFN 207

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            + E+  VV+W  +I+ Y   G   +A+ LF  M   G   + YT  + + AC +     
Sbjct: 208 GLVERT-VVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAG 266

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARC---GKMTEAAGVLYQLENKDSVSWNSMLT 234
           LG ++H+  ++ G      V+  L+ MY +      M  A  V  ++   + +SW ++++
Sbjct: 267 LGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALIS 326

Query: 235 GFVQ-NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           G+VQ       A++   E+     +P+ +   + + A   L +  +G+++HA  +K    
Sbjct: 327 GYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIG 386

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           +   +GN L+ MYA+  C+    + F Q+  ++ +S ++ I    ++N    +       
Sbjct: 387 NVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSS------- 439

Query: 354 QLEGLDADV--MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
           Q+E +D  V      S+L A + +   ++ +++H   I+ G  SD  I N++V +Y +CG
Sbjct: 440 QIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCG 499

Query: 411 NIDYSRNVFESIE-SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
            +D +   F+ +E   +V+SWTS+IS+   +G A  AL LF+ M  + V+ + +T ++ L
Sbjct: 500 YLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVL 559

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK- 526
           SA S + ++K+GKE     ++K   L   +   + +VD+ AR G +  A +  N +  K 
Sbjct: 560 SACSHVGLVKEGKEYFRS-MQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKA 618

Query: 527 DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           D ++W +++ A   +     G++A      +E +  AP     L+ LYA  H GL +E  
Sbjct: 619 DALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAP--YVLLSNLYA--HGGLWDEVA 674

Query: 584 KFLEIMR 590
           +   +MR
Sbjct: 675 RIRSLMR 681


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 294/950 (30%), Positives = 481/950 (50%), Gaps = 119/950 (12%)

Query: 2    YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
            + KCG + DA  LF  + +R V +WNAM+G Y   G        +  M   G+  D +T 
Sbjct: 137  HSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTL 196

Query: 62   PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV------------------------- 96
              V++A A    L    +IHG++ + GY S D +                          
Sbjct: 197  GSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLK 256

Query: 97   ----------------------NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
                                  N+L+ MYAK  +   A++ FD M EK +V+ W S+IS 
Sbjct: 257  KDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEK-NVISWTSLISG 315

Query: 135  YSASGQCL---------------------------------EALGLFREMQRVGLVTNAY 161
            Y+  G                                    EA+GLF +M  +G+  N +
Sbjct: 316  YAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGF 375

Query: 162  TFVAALQACEDSSF-ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
               + + AC  S +    G ++H   VK+G    VYV  AL+  Y   G +  A  +  +
Sbjct: 376  MVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEE 435

Query: 221  LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
            + + + VSW S++ G+  +    + +  ++ ++  G   +Q       S+ G L + + G
Sbjct: 436  MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 495

Query: 281  KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
             ++  + I+ GF   + + N+L+ M++    V     VF  M   D ISW  +I+ YA +
Sbjct: 496  YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 555

Query: 341  NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
                ++L  F  ++    + +   + S+L  CS +  +   + IHG +++ GL S++ I 
Sbjct: 556  GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 615

Query: 400  NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL----------------- 442
            N ++ +Y + G  + +  VF+++  +D++SW SM++ YV +G                  
Sbjct: 616  NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKP 675

Query: 443  -----------------ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
                              NEA++ + L+ E  + ++ IT+VS L+A ++L++L++G++L+
Sbjct: 676  DRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-LAATANLAVLEEGQQLH 734

Query: 486  GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
            G +I+ GF  +  V ++ +DMY +CG +    K+      +  + W  +I+A   HG  +
Sbjct: 735  GLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQ 794

Query: 546  VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
             A + F++M      PDH+TF++LL AC+H GL++EG  + + M  ++ + P  EH  C+
Sbjct: 795  KARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCI 854

Query: 606  VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
            +DLLGR+  L  A  F++ M + P    W +LL ACR+H N EL    A+ LLELDP + 
Sbjct: 855  IDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDD 914

Query: 666  GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
              YVL SNV A S KW+DVE +R  M  + +KK P  SW+++ +K+HSF   +K H ++ 
Sbjct: 915  SAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQAS 974

Query: 726  EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
             I  KL E+  K+ +E GYV  T F LH+++EE+K   L+ HSERLA+A+G++ + E S 
Sbjct: 975  RISAKLGELM-KMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESST 1033

Query: 786  IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +RI KNLRVC DCHS  K VS + GR++V+RD  RFHHF  G CSCGDYW
Sbjct: 1034 LRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 173/704 (24%), Positives = 319/704 (45%), Gaps = 129/704 (18%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G V+ A  +FD + +R+V +W AM+  Y  NG   +    +S MR           
Sbjct: 75  YVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMR----------- 123

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
                         CG K +               ++LV  ++KC     A  LF  M E
Sbjct: 124 -------------HCGVKAN---------------HALVDFHSKCGKMEDASYLFGTMME 155

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV WN++I  Y+  G   ++  +FR M R GLV + YT  + L+A  +     +  +
Sbjct: 156 R-DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQ 214

Query: 182 IHA------------------------ATVKSGQNLQ----------------------V 195
           IH                          +++S ++L+                      +
Sbjct: 215 IHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGI 274

Query: 196 Y-VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS----------------------- 231
           Y + NALI MYA+ G++ +A     ++E K+ +SW S                       
Sbjct: 275 YTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEM 334

Query: 232 ----------MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-G 280
                     ML+G+V+  LY +A+  F ++ G G +P+     + ++A  R G + + G
Sbjct: 335 RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEG 394

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
            ++H + +K G + D+ +G  L+  Y     V    ++F +M   + +SWT+++ GY+ +
Sbjct: 395 FQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDS 454

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-IL 399
               + L +++ ++ EG+  +     +V  +C  L+      ++ G+II+ G  D V + 
Sbjct: 455 GNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVA 514

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N+++ ++    +++ +  VF+ +   D++SW +MIS+Y H+GL  E+L  F+ M   + E
Sbjct: 515 NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNE 574

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
           ++S TL S LS  SS+  LK G+ ++G +++ G +    + ++L+ +Y+  G  + A  V
Sbjct: 575 TNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELV 634

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  +  +DLI W SM+      G+    + +  ++  +   PD +T+ AL+   + +   
Sbjct: 635 FQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL-LQMGKPDRVTWNALIGGHAENEEP 693

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH--LEEAYQF 621
           NE  K  +++R        P +Y  +V L   AN   LEE  Q 
Sbjct: 694 NEAVKAYKLIR----EKGIPANYITMVSLAATANLAVLEEGQQL 733



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 139/581 (23%), Positives = 249/581 (42%), Gaps = 122/581 (20%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D   +  +++ C   K    G  IH  ++  G+ S   +   L+  Y K  D   AR +
Sbjct: 28  LDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNV 87

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M E+  VV W +++S YS +G+  +A  LF +M+  G+  N                
Sbjct: 88  FDGMPERS-VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN---------------- 130

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                                  +AL+  +++CGKM +A+ +   +  +D VSWN+M+ G
Sbjct: 131 -----------------------HALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGG 167

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS- 294
           +        +   FR +   G  PD     + + AS   G L+   ++H    + G+ S 
Sbjct: 168 YAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSY 227

Query: 295 ---------------------DLQ-------------------------IGNTLMDMYAK 308
                                DL+                         +GN L+DMYAK
Sbjct: 228 DIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAK 287

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN---------------------------- 340
              +    R F +M  ++ ISWT++I+GYA++                            
Sbjct: 288 SGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLS 347

Query: 341 -----NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK-EIHGYIIRKG-L 393
                  + +A+ LF  +   G++ +  ++ S++ ACS    M+    ++HG++++ G L
Sbjct: 348 GYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGIL 407

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
            D+ +  A+V  YG  G +  ++ +FE +   +VVSWTS++  Y  +G   E L ++  M
Sbjct: 408 GDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM 467

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
            +  V  +  T  +  S+   L     G ++ G II+ GF    SVA+SL+ M++   ++
Sbjct: 468 RQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSV 527

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
           + A  VF+ +   D+I W +MI+A   HG  + ++  F+ M
Sbjct: 528 EEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM 568



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 149/303 (49%), Gaps = 34/303 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+    SV +A  +FD +++  + +WNAM+ AY  +G     L  +  MR L    ++ T
Sbjct: 520 MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 579

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++  C+ + +L  G  IHGLV+K G DS   I N+L+ +Y++      A  +F  M 
Sbjct: 580 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 639

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG----LVTNA---------------- 160
           E+ D++ WNS+++ Y   G+CL+ L +  E+ ++G    +  NA                
Sbjct: 640 ER-DLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVK 698

Query: 161 -------------YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
                        Y  + +L A  + +    G ++H   +K G    ++V NA + MY +
Sbjct: 699 AYKLIREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGK 758

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
           CG+M +   +L Q  N+  +SWN +++ F ++  + KA + F E+   G KPD V  V+ 
Sbjct: 759 CGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSL 818

Query: 268 VSA 270
           +SA
Sbjct: 819 LSA 821



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 41/241 (17%)

Query: 339 QNNCHLKAL-ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
           Q+ C+L  L E  + +       D  +   +L  C   K   Q   IH ++I  G  SDL
Sbjct: 6   QSACNLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDL 65

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            +   ++  Y K G++  +RNVF+ +  + VVSWT+M+S Y  NG   +A  LF  M   
Sbjct: 66  HLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHC 125

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            V+++                                        +LVD +++CG ++ A
Sbjct: 126 GVKAN---------------------------------------HALVDFHSKCGKMEDA 146

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
           + +F  +  +D++ W +MI    + G    +  +F  M      PD  T  ++L A +  
Sbjct: 147 SYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEG 206

Query: 577 G 577
           G
Sbjct: 207 G 207



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 36/68 (52%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + D  ++  +   R+  +WN ++ A+  +G   +  ET+  M  LG   D  T
Sbjct: 755 MYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVT 814

Query: 61  FPCVIKAC 68
           F  ++ AC
Sbjct: 815 FVSLLSAC 822


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 249/728 (34%), Positives = 437/728 (60%), Gaps = 4/728 (0%)

Query: 110 RKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA 169
           + A  LF+ M  + D  +WN +I  +  +G   +A+  +  M+  G+  + +T+   ++A
Sbjct: 77  KNALDLFENM-RQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKA 135

Query: 170 CEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
           C        G  +H   +KSG +L +Y+ N+LI MYA+ G +  A  V  ++  +D VSW
Sbjct: 136 CGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSW 195

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
           NSM++G+V      +++  FRE+Q +G K D+   +  + A    G L NGKE+H   ++
Sbjct: 196 NSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMR 255

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
                D+ +  +L+DMYAKC  ++Y  R+F Q+T +  ++W  +I GY+ N    ++   
Sbjct: 256 SRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAY 315

Query: 350 FRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYG 407
            R +Q  G L  D + + ++L  C+ L+ +   K +HG+ IR G L  LV+  A+VD+YG
Sbjct: 316 VRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYG 375

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           +CG +  +  +F  +  ++++SW +MI+SY  NG   +A+ LF  +    ++ D+ T+ S
Sbjct: 376 ECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIAS 435

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            L A + L+ L++ ++++G++ +   +    V++S+V MY +CG L  A ++F+ +  KD
Sbjct: 436 ILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKD 495

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           +I W ++I A  +HG G+++I+LF +M  + F P+  TF++LL +CS +GL+NEG ++  
Sbjct: 496 VISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFN 555

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
            M+ DY ++P  EHY C++DL+GR  +L+ A  F+  M + PTA +W +LL A R   + 
Sbjct: 556 SMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDV 615

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           EL EI A+ +L L+  N G YVL+SN++A + +W+DVE+++  M+  GL+K+ G S +++
Sbjct: 616 ELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDL 675

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGH 767
            +K   F+ +D+S +E + +Y  L  I++K+  +    + T+F   ++ E+++      H
Sbjct: 676 SSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSLTKFRPSDL-EKKRANSAKSH 734

Query: 768 SERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
           S RLAI +G++ +T G+ + + KN+R+C  CH F K +S    RE++VRD+  FHHF  G
Sbjct: 735 SLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRISETTKREIIVRDSKIFHHFNGG 794

Query: 828 VCSCGDYW 835
            CSCGDYW
Sbjct: 795 HCSCGDYW 802



 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 185/552 (33%), Positives = 299/552 (54%), Gaps = 9/552 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G + +A  LF+ + Q   F WN M+  +V NG     ++ Y RM   G+  D FT+
Sbjct: 70  YVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTY 129

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P VIKAC  L DL  G ++HG V+K G D   +I NSL+ MYAK      A  +F  M  
Sbjct: 130 PFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPV 189

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D+V WNS+IS Y + G    +L  FREMQ  G+  + ++ +  L AC    F   G E
Sbjct: 190 R-DLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKE 248

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   ++S   L V V  +L+ MYA+CG+M  A  +  Q+ +K  V+WN+M+ G+  N  
Sbjct: 249 IHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQ 308

Query: 242 YCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             ++  + R++Q  G+  PD +  +N +    +L  +L GK +H +AI+ GF+  L +  
Sbjct: 309 SFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLET 368

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY +C  +     +F QM  ++ ISW  +IA Y +N  + KA+ LF+ +  + L  
Sbjct: 369 ALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKP 428

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D   I S+L A + L  + + ++IHGY+ +  L S+  + N+IV +YGKCGN+  +R +F
Sbjct: 429 DATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIF 488

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +  KDV+SW ++I +Y  +G    ++ELF  M E   E +  T VS L + S   ++ 
Sbjct: 489 DRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVN 548

Query: 480 KGKE-LNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMI 535
           +G E  N   +++ +N+   +     ++D+  R G LD A N +          +W S++
Sbjct: 549 EGWEYFNS--MKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLL 606

Query: 536 NANGLHGRGKVA 547
            A+   G  ++A
Sbjct: 607 TASRNKGDVELA 618



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 227/448 (50%), Gaps = 11/448 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  AE +F ++  R + +WN+M+  YVS G+  R L  +  M+  GI +D F+
Sbjct: 170 MYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFS 229

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ AC++   L  G +IH  +++   +    +  SLV MYAKC     A +LFD++ 
Sbjct: 230 VIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQIT 289

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLG 179
           +K  +V WN++I  YS + Q  E+    R+MQ  G L  +  T +  L  C       LG
Sbjct: 290 DKS-IVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLG 348

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   +++G    + +  AL+ MY  CGK+  A  +  Q+  ++ +SWN+M+  + +N
Sbjct: 349 KSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKN 408

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               KAM  F++L     KPD     + + A   L +L   +++H Y  K    S+  + 
Sbjct: 409 GENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVS 468

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+++ MY KC  +     +F +MT +D ISW T+I  YA +     ++ELF  ++ +G +
Sbjct: 469 NSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFE 528

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            +     S+L++CS    +++  E        Y I  G+        I+D+ G+ GN+D+
Sbjct: 529 PNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEH---YGCILDLIGRTGNLDH 585

Query: 415 SRNVFESIESKDVVS-WTSMISSYVHNG 441
           ++N  E +        W S++++  + G
Sbjct: 586 AKNFIEEMPLAPTARIWGSLLTASRNKG 613



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 199/385 (51%), Gaps = 2/385 (0%)

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           ++ Y   G M  A  +   +   D+  WN M+ GFV N L+  A+ F+  ++  G + D 
Sbjct: 67  LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
                 + A G L +L  G+ +H   IK G   D+ IGN+L+ MYAK  C+     VF +
Sbjct: 127 FTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFRE 186

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
           M  +D +SW ++I+GY       ++L  FR +Q  G+  D   +  +L ACS    +   
Sbjct: 187 MPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNG 246

Query: 382 KEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
           KEIH  ++R  L  D+++  ++VD+Y KCG +DY+  +F+ I  K +V+W +MI  Y  N
Sbjct: 247 KEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLN 306

Query: 441 GLANEALELFYLMNE-ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
             + E+      M E   +  D IT+++ L   + L  +  GK ++GF IR GF     +
Sbjct: 307 AQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVL 366

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            ++LVDMY  CG L  A  +F  +  ++LI W +MI +   +G  + A+ LF  +  ++ 
Sbjct: 367 ETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTL 426

Query: 560 APDHITFLALLYACSHSGLINEGKK 584
            PD  T  ++L A +    + E ++
Sbjct: 427 KPDATTIASILPAYAELASLREAEQ 451



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 123/245 (50%), Gaps = 4/245 (1%)

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           V L   +  Y + G +  + ++FE++   D   W  MI  +V NGL  +A++ ++ M   
Sbjct: 61  VSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFG 120

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            V  D+ T    + A   L  L +G+ ++G +I+ G +L+  + +SL+ MYA+ G ++ A
Sbjct: 121 GVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESA 180

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             VF  +  +DL+ W SMI+     G G  ++  F +M+A     D  + + +L ACS  
Sbjct: 181 EMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLE 240

Query: 577 GLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           G +  GK+   ++MR   +LD   +    LVD+  +   ++ A +    +  + +   W 
Sbjct: 241 GFLRNGKEIHCQMMRSRLELDVMVQ--TSLVDMYAKCGRMDYAERLFDQIT-DKSIVAWN 297

Query: 636 ALLGA 640
           A++G 
Sbjct: 298 AMIGG 302


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/809 (34%), Positives = 443/809 (54%), Gaps = 43/809 (5%)

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDF------RKARQLF-DR 118
           K C  + +L    ++H  + K G +     + +L++   +   F      +KA +LF + 
Sbjct: 41  KKCKTMTELK---QLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIED 97

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
            G      +++S+I  +SA G   +A+ +FR++  +G V + +TF   L AC  S+  T 
Sbjct: 98  NGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTE 157

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++H A VK G    ++V N+LI  Y  CG++     V  ++  ++ VSW S++ G+ +
Sbjct: 158 GFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAK 217

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
              Y +A+  F E+   G +P+ V  V  +SA  +L +L  G+++     +     +  +
Sbjct: 218 RGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALM 277

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+DMY KC  ++   ++F +   ++ + + TI++ Y +     + L +   +   G 
Sbjct: 278 VNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGP 337

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRN 417
             D + + S + ACS L  +S  K  HGY++R GL     + NAI+++Y KCG  + +  
Sbjct: 338 RPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACR 397

Query: 418 VFESIESKDVVSWTSMISSYVHNG-------------------------------LANEA 446
           VF+ + +K  VSW S+I+ +V NG                               +  EA
Sbjct: 398 VFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEA 457

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           +ELF +M    + +D +T+V   SA   L  L   K ++G+I +K  + +  + ++LVDM
Sbjct: 458 IELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDM 517

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           +ARCG    A +VFN +  +D+  WT+ I A  + G G  AI+LF +M  +   PD + F
Sbjct: 518 FARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVF 577

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           +ALL A SH GL+ +G      M+  Y + P   HY C+VDLLGRA  L EA   + SMQ
Sbjct: 578 VALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQ 637

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           +EP   +W +LL ACRVH N ++    A+++ ELDP   G +VL+SN++A++ +W DV +
Sbjct: 638 MEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAK 697

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR+ ++  G  K PGSS IEI  KI  F   D+SH E   I   L EI  +L R+ GYV 
Sbjct: 698 VRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRL-RDIGYVP 756

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
               VL +V E+EK  +L  HSE+LAIA+ ++ + +G  IR+ KNLR+C DCHSF KLVS
Sbjct: 757 DLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVS 816

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + + RE++VRD NRFH F+ G CSCGDYW
Sbjct: 817 KSYSREIIVRDNNRFHFFQQGFCSCGDYW 845



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 282/564 (50%), Gaps = 43/564 (7%)

Query: 22  TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIH 81
           T + +++++  + + G   + +  + ++  +G   D FTFP V+ AC     L  G ++H
Sbjct: 103 THYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVH 162

Query: 82  GLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQC 141
           G ++K G++   F+ NSL+  Y +C +    R++FD+M E+ +VV W S+I  Y+  G  
Sbjct: 163 GAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSER-NVVSWTSLIGGYAKRGCY 221

Query: 142 LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANAL 201
            EA+ LF EM  VG+  N+ T V  + AC       LG ++     +    +   + NAL
Sbjct: 222 KEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNAL 281

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           + MY +CG + +A  +  +  +K+ V +N++++ +V+  L  + +    E+   G +PD+
Sbjct: 282 VDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDR 341

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
           +  ++AVSA   L ++  GK  H Y ++ G      + N +++MY KC       RVF +
Sbjct: 342 ITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDR 401

Query: 322 MTAQDFISWTTIIAGYAQN-------------------------------NCHLKALELF 350
           M  +  +SW ++IAG+ +N                               +   +A+ELF
Sbjct: 402 MLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELF 461

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
           R +Q EG+ AD + +  V  AC  L  +   K IHGYI +K +  D+ +  A+VD++ +C
Sbjct: 462 RVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARC 521

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G+   +  VF  +  +DV +WT+ I +    G    A+ELF  M +  ++ D +  V+ L
Sbjct: 522 GDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALL 581

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASS-----LVDMYARCGALDIANKVFNCVQ 524
           +A S   ++++G      I R   ++ G    +     +VD+  R G L  A  + N +Q
Sbjct: 582 TALSHGGLVEQGWH----IFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQ 637

Query: 525 TK-DLILWTSMINANGLHGRGKVA 547
            + + ++W S++ A  +H    +A
Sbjct: 638 MEPNDVIWGSLLAACRVHKNVDIA 661



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 232/475 (48%), Gaps = 47/475 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YG+CG +    ++FDK+S+R V +W +++G Y   G     +  +  M  +GI  ++ T 
Sbjct: 184 YGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTM 243

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             VI ACA L+DL  G ++   + +   +    +VN+LV MY KC    KAR++FD   +
Sbjct: 244 VGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVD 303

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K ++VL+N+I+S Y   G   E L +  EM + G   +  T ++A+ AC +    + G  
Sbjct: 304 K-NLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKW 362

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN-- 239
            H   +++G      V NA+I MY +CGK   A  V  ++ NK  VSWNS++ GFV+N  
Sbjct: 363 CHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGD 422

Query: 240 -----------------------------DLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
                                         ++ +A++ FR +Q  G   D+V  V   SA
Sbjct: 423 MESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASA 482

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
            G LG L   K +H Y  K+    D+ +G  L+DM+A+C       +VF +M  +D  +W
Sbjct: 483 CGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAW 542

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
           T  I   A       A+ELF  +  +G+  D ++  ++L A S    + Q     G+ I 
Sbjct: 543 TAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQ-----GWHIF 597

Query: 391 KGLSDL-------VILNAIVDVYGKCGNIDYSRNVFES--IESKDVVSWTSMISS 436
           + + D+       V    +VD+ G+ G +  + ++  S  +E  DV+ W S++++
Sbjct: 598 RSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVI-WGSLLAA 651



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 170/422 (40%), Gaps = 63/422 (14%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A ++FD+   + +  +N ++  YV  G    VL     M   G   D  T
Sbjct: 284 MYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRIT 343

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM- 119
               + AC+ L D+ CG   HG VL+ G +  D + N+++ MY KC     A ++FDRM 
Sbjct: 344 MLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRML 403

Query: 120 -----------------GEKE------------DVVLWNSIISAYSASGQCLEALGLFRE 150
                            G+ E            D+V WN++I A        EA+ LFR 
Sbjct: 404 NKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRV 463

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           MQ  G+  +  T V    AC       L   IH    K   +  +++  AL+ M+ARCG 
Sbjct: 464 MQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGD 523

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
              A  V  ++  +D  +W + +           A++ F E+   G KPD V  V  ++A
Sbjct: 524 PQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTA 583

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC-------CCVNYMGRV----- 318
                        H   ++QG+     I  ++ D+Y          C V+ +GR      
Sbjct: 584 LS-----------HGGLVEQGW----HIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSE 628

Query: 319 ------FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
                   QM   D I  + + A     N  + A    R  +L+     + ++ S + A 
Sbjct: 629 ALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYAS 688

Query: 373 SG 374
           +G
Sbjct: 689 AG 690


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/845 (32%), Positives = 455/845 (53%), Gaps = 15/845 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS  +A  +F  +  ++V  W +++G    +G P      +  M++ G+  +  T
Sbjct: 84  MYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVT 143

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVA-MYAKCYDFRKARQLFDRM 119
           +  V+ AC    ++D    I   V  CG    D IV + V   Y KC D   A  +FD +
Sbjct: 144 YVAVLGACGHPWEVD---TIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGI 200

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + D  +WN++IS   A  Q  EAL LFR+M+  G+  N  T VAAL AC  S   +  
Sbjct: 201 LVR-DAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEA 259

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           + IHA   +   +    V  AL+ MY + GK+ +A  +  +++ +D VSWN+MLT    N
Sbjct: 260 LRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACN 319

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF---VSDL 296
             + KA + FRE+   G+ P ++  V  ++A     +L +G  +   A++ G      D+
Sbjct: 320 GFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDV 379

Query: 297 QIGNTLMDMYAKCCCVN--YMGRVFYQMT--AQDFISWTTIIAGYAQNNCHLKALELFRT 352
            +G  +M+MY++C      +   +  +        + W T+++ Y +N    +A  +FR 
Sbjct: 380 VMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRL 439

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGN 411
           + L G+  D + + +V  AC     + + K IH  +    L+    + NA+V +Y + G+
Sbjct: 440 MLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGS 499

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           ++ +R +F+++ +++V+SWT+M+  +   GL  EAL +F  +    V  + +T  + L+A
Sbjct: 500 LEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNA 559

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
             +L+ +   K +   +   GF     VA+ L+    +CG+L+     F  +  K+ + W
Sbjct: 560 CGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSW 619

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            + I AN  HG G   ++LF  M+ E      +T + +L +CSH+GL+ +G  +   M  
Sbjct: 620 NTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHV 679

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI-EPTAEVWCALLGACRVHSNKELG 650
           DY      EHY+C++DLL RA  LE A +FV+ +   + +   W  LL  C++H + E G
Sbjct: 680 DYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERG 739

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
               +++L L+PG+ G Y+++ N++A + KW +   VR  M   G KK PG SWIE+  +
Sbjct: 740 GRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGR 799

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSER 770
           IH F   D SH  S EI+++L  + E+++R  G+V   + V+++++ +EK  +L  HSE+
Sbjct: 800 IHEFRVGDTSHPRSSEIHRELERLNEEMKR-AGFVCDIKAVVYDLQAKEKESLLCQHSEK 858

Query: 771 LAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCS 830
           LAIA+G++ +  G  +RI KNLRVC DCHS  K +S L GRE+VVRDA RFHHF  G CS
Sbjct: 859 LAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACS 918

Query: 831 CGDYW 835
           C D+W
Sbjct: 919 CEDFW 923



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 179/626 (28%), Positives = 312/626 (49%), Gaps = 16/626 (2%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
           S DA TF  +I  CA L DL  G +IHGL+L+ G +  DF+   L+AMY KC    +AR 
Sbjct: 37  SADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARA 96

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS- 173
           +F  + +K  VV W S+I   + SG   EA  LFREMQ  G++ N  T+VA L AC    
Sbjct: 97  VFQGIQDK-SVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPW 155

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
             +T+   + A        L V VA A++  Y +CG +  A GV   +  +D+  WN+M+
Sbjct: 156 EVDTIRARVEAC---GSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMI 212

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           +  V ++   +A++ FR+++  G  P++   V A++A     +      +HA+A +    
Sbjct: 213 SLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGD 272

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           +D  +   L++MY K   V+    +F ++  +D +SW  ++   A N  H KA + FR +
Sbjct: 273 ADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREM 332

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS----DLVILNAIVDVYGKC 409
            L G     +   ++L AC     +     +    +  G      D+V+  AI+++Y +C
Sbjct: 333 LLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRC 392

Query: 410 GNID--YSRNVF--ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
            +    +S ++   +  +   ++ W +++S YV N    EA  +F LM    V  D+++L
Sbjct: 393 KSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSL 452

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
           ++  +A  S + L+KGK ++  +       +  V ++LV MYAR G+L+ A ++F+ + T
Sbjct: 453 MTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTT 512

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           +++I WT+M+  +   G  + A+ +F  +  E  AP+ +TF A+L AC +   I    K 
Sbjct: 513 RNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASI-PAAKL 571

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
           ++    +       E    L+  LG+   LEE   F + M ++     W   + A   H 
Sbjct: 572 VQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVS-WNTAIAANAQHG 630

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLI 671
           N   G +   + ++L+  + G+  LI
Sbjct: 631 NGVRG-VELFQTMQLEGIDTGSVTLI 655


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/780 (35%), Positives = 452/780 (57%), Gaps = 15/780 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEK 122
           ++ + A   DL  G  +H  +L+     TD +V NSL+ MY+KC     AR++FD+M   
Sbjct: 46  LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC-EDSSFETLGME 181
            D+V W ++ S  + +G   E+L L  EM  +GL  NA+T  AA +AC     F   G  
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165

Query: 182 IHAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +    +K+G     V V  ALI M+AR G +  A  V   L  + SV W  ++T +VQ  
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAG 225

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              K ++ F  +   G +PD     + +SA   LG++  G++LH+ A++ G VSD  +  
Sbjct: 226 CASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSC 285

Query: 301 TLMDMYAKCC---CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-ALELFRTVQLE 356
            L+DMYAK      + +  +VF  M   + +SWT +I+GY Q+       + LFR +  E
Sbjct: 286 GLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNE 345

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYS 415
            +  + +   ++L AC+ L      ++IH ++++  ++ + V+ NA+V +Y + G ++ +
Sbjct: 346 SIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEA 405

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           R  F+ +   +++S +  + +  +N   +  +E    M++      + T  S LSAA+S+
Sbjct: 406 RKAFDQLYETNILSMSPDVETERNNASCSSKIEG---MDDG---VSTFTFASLLSAAASV 459

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
            +L KG++L+   ++ GF  +  +++SLV MYARCG L+ A + F+ ++  ++I WTS+I
Sbjct: 460 GLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSII 519

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           +    HG  K A+ +F+ M      P+ +T++A+L ACSH GL+ EGK+    M+ D+ L
Sbjct: 520 SGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGL 579

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
            P  EHYAC+VDLL R+  +EEA QF+  M  +  A VW  LL ACR + N E+GEI A 
Sbjct: 580 LPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAAN 639

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
            ++ L+P +P  YVL+SN++A +  W +V ++R  MR   L K  G SW+++GN IH F 
Sbjct: 640 HVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFR 699

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
           A D SH  + +IY KL  +  ++ ++ GYV  T  VLH++ EE K Q L  HSE++A+A+
Sbjct: 700 AGDTSHPLAIDIYAKLVTLIREI-KDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAF 758

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G++ ++    +RI KNLRVC DCHS  K +S+  GRE+++RD+NRFH  + G+CSCG+YW
Sbjct: 759 GLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 164/606 (27%), Positives = 301/606 (49%), Gaps = 30/606 (4%)

Query: 1   MYGKCGSVLDAEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KCG+V  A ++FD++   R + +W AM      NG     L     M  LG+  +AF
Sbjct: 85  MYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAF 144

Query: 60  TFPCVIKACAMLKDLD-CGAKIHGLVLKCGYDSTDFIVN-SLVAMYAKCYDFRKARQLFD 117
           T     +AC   +     G  + G VLK G+  TD  V  +L+ M+A+  D   A+++FD
Sbjct: 145 TLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFD 204

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            + E+  VV W  +I+ Y  +G   + + LF  M   G   + Y+  + + AC +     
Sbjct: 205 GLIERTSVV-WTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVR 263

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCG---KMTEAAGVLYQLENKDSVSWNSMLT 234
           LG ++H+  ++ G      V+  L+ MYA+      M  A  V   +   + +SW ++++
Sbjct: 264 LGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALIS 323

Query: 235 GFVQNDLY-CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           G+VQ+ +     M  FRE+     +P+ +   N + A   L +  +G+++HA+ +K    
Sbjct: 324 GYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIA 383

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN-NCHLKALELFRT 352
               +GN L+ MYA+  C+    + F Q+   + +S +  +     N +C         +
Sbjct: 384 HVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASC---------S 434

Query: 353 VQLEGLDADV--MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKC 409
            ++EG+D  V      S+L A + +  +++ +++H   ++ G  SD  I N++V +Y +C
Sbjct: 435 SKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARC 494

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G ++ +   F+ ++  +V+SWTS+IS    +G A +AL +F+ M  A V+ + +T ++ L
Sbjct: 495 GYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVL 554

Query: 470 SAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-D 527
           SA S + ++K+GKE         G        + +VD+ AR G ++ A +  N +  K D
Sbjct: 555 SACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKAD 614

Query: 528 LILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            ++W ++++A   +G    G++A +    +E    AP     L+ LYA   +GL +E  +
Sbjct: 615 ALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAP--YVLLSNLYA--DAGLWDEVAR 670

Query: 585 FLEIMR 590
              +MR
Sbjct: 671 IRSLMR 676


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/635 (38%), Positives = 387/635 (60%), Gaps = 33/635 (5%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           L+  YA CG+      +  ++  K+ V +N M+  +V N LY  A+  F+ + G G  PD
Sbjct: 77  LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
                  + AS    +L  G ++HA  ++ G   ++ +GN L+ MY KC C+    RV  
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
           QM  +D +SW +++AG A+N     ALE+ + ++L GL  D   + S+L A         
Sbjct: 197 QMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA--------- 247

Query: 381 TKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
                            + N  +D      N+ + + +F  + +K +VSW  MI+ Y++N
Sbjct: 248 -----------------VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNN 284

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
            +  EA+++F  M +  V+ D+I++ S L A   LS L  G+ ++ +++RK       + 
Sbjct: 285 SMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLE 344

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           ++L+DMYA+CG L+ A +VF+ ++ +D++ WTSMI+A G++G+G+ A+ LF +M+     
Sbjct: 345 NALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLN 404

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
           PD I F+++L ACSH+GL++EG+ + ++M  + ++ P  EH+ C+VDLLGRA  ++EAY 
Sbjct: 405 PDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYG 464

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
           F++ M +EP   VW ALL ACRV+SN  +G + A +L +L P   G YVL+SN++A + +
Sbjct: 465 FIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGR 524

Query: 681 WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
           W+DV  VR  M+  G+KK PG S  E+ N++H+F+A D+SH +S +IY++L     K+ +
Sbjct: 525 WEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKM-K 583

Query: 741 EGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHS 800
           E GYV +T   LH+VEEE+K   L  HSE+LAIA+ +L +  GS IRITKNLRVC DCH 
Sbjct: 584 EAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHI 643

Query: 801 FCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             KL+S++ GRE+ +RD NRFHHF  GVCSCGDYW
Sbjct: 644 AAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 218/439 (49%), Gaps = 39/439 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG       +FD++ ++ V  +N M+ +YV+N      L  +  M   GI  D +T+
Sbjct: 81  YAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTY 140

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           PCV+KA +  +DL  G +IH  V++ G D   F+ N L++MY KC    +A ++ D+M  
Sbjct: 141 PCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPC 200

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV WNS+++  + +GQ  +AL + +EM+ +GL  +A T  + L A  ++  + +   
Sbjct: 201 R-DVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSF- 258

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
                VK                            +  +L NK  VSWN M+  ++ N +
Sbjct: 259 -----VKE---------------------------MFMKLANKSLVSWNVMIAVYMNNSM 286

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F +++     PD +   + + A G L  LL G+ +H Y +++    +L + N 
Sbjct: 287 PAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENA 346

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC C+ Y   VF QM  +D +SWT++I+ Y  N     A+ LF  +Q  GL+ D
Sbjct: 347 LIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPD 406

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
            +   SVL ACS    + + +     +    K +  +     +VD+ G+ G +D +    
Sbjct: 407 SIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFI 466

Query: 420 E--SIESKDVVSWTSMISS 436
           +   +E  + V W +++S+
Sbjct: 467 KQMPMEPNERV-WGALLSA 484



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 34/281 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG +++A ++ D++  R V +WN+++     NG+    LE    M +LG+  DA T
Sbjct: 181 MYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGT 240

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A                V     D+  F+                 +++F ++ 
Sbjct: 241 MASLLPA----------------VTNTCLDNVSFV-----------------KEMFMKLA 267

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  +V WN +I+ Y  +    EA+ +F +M+   +  +A +  + L AC D S   LG 
Sbjct: 268 NKS-LVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGR 326

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   V+      + + NALI MYA+CG +  A  V  Q++ +D VSW SM++ +  N 
Sbjct: 327 RIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNG 386

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
               A+  F  +Q  G  PD +  V+ +SA    G L  G+
Sbjct: 387 KGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR 427


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/763 (35%), Positives = 439/763 (57%), Gaps = 11/763 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG V DA  +FD +S R V  WNAM+  YV  G     +     M    +  ++ T 
Sbjct: 98  YCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTM 157

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             ++ AC    +L  G  +HG  L+ G +DS   +  +L+  Y + +D R    LFD M 
Sbjct: 158 VALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLR-FDMRVLPLLFDLMV 216

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + ++V WN++IS Y   G   +AL LF +M    +  +  T + A+QAC +     LG 
Sbjct: 217 VR-NIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGK 275

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K      +Y+ NAL+ MY+  G +  +  +   + N+D+  WNSM++ +    
Sbjct: 276 QIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFG 335

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN-LLNGKELHAYAIKQGFVSDLQIG 299
            + +AM  F  +Q  G K D+   V  +S    L + LL GK LHA+ IK G   D  +G
Sbjct: 336 CHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLG 395

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+ MY +  CV  + ++F +M   D ISW T+I   A+N    +A ELF  ++   + 
Sbjct: 396 NALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIK 455

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            +   I S+L AC  + C+   + IHGY+++  +  +  +  A+ D+Y  CG+   +R++
Sbjct: 456 PNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDL 515

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           FE    +D++SW +MI+SYV N  A++AL LF+ M  +  E +S+T+++ LS+ + L+ L
Sbjct: 516 FEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRM-ISEAEPNSVTIINVLSSFTHLATL 574

Query: 479 KKGKELNGFIIRKGFNL--EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            +G+ L+ ++ R+GF+L  + S+A++ + MYARCG+L  A  +F  +  +++I W +MI 
Sbjct: 575 PQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIA 634

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
             G++GRG  A+  F +M  + F P+ +TF+++L ACSHSG I  G +    M  D+ + 
Sbjct: 635 GYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVT 694

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P   HY+C+VDLL R   ++EA +F+ SM IEP A VW ALL +CR +S+ +  + + +K
Sbjct: 695 PELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEK 754

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L +L+P N GNYVL+SNV+A +  W +V ++R  ++  GL+K PG SWI + N++H F A
Sbjct: 755 LDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSA 814

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
            D+SH +SD+IY KL+ +   + RE GY    ++V H  EE++
Sbjct: 815 GDRSHPQSDKIYAKLSILLSSM-RETGYDPDLRWVFH--EEDD 854



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 174/575 (30%), Positives = 305/575 (53%), Gaps = 12/575 (2%)

Query: 17  KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDC 76
           K+  +    WN+++    +      +L  Y++M  LG+  +  T P V+KACA    ++ 
Sbjct: 12  KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71

Query: 77  GAKIHGLVLKCGYDSTDFIV--NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
           G  IH  +   G D  D +    ++V  Y KC     AR +FD M ++ DVVLWN+++  
Sbjct: 72  GKSIHRSIQ--GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDR-DVVLWNAMVYG 128

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NL 193
           Y   G   EA+ L REM R  L  N+ T VA L ACE +S   LG  +H   +++G  + 
Sbjct: 129 YVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDS 188

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
             +VA ALI  Y R         +L+ L   ++ VSWN+M++G+     Y KA++ F ++
Sbjct: 189 NPHVATALIGFYLRFD--MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM 246

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
                K D V  + AV A   LG+L  GK++H  AIK  FV DL I N L++MY+    +
Sbjct: 247 LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSL 306

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
               ++F  +  +D   W ++I+ YA   CH +A++LF  +Q EG+  D   +  +L  C
Sbjct: 307 ESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC 366

Query: 373 SGLKC-MSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
             L   + + K +H ++I+ G+  D  + NA++ +Y +   ++  + +F+ ++  D++SW
Sbjct: 367 EELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISW 426

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
            +MI +   N L  +A ELF  M E+ ++ +S T++S L+A   ++ L  G+ ++G++++
Sbjct: 427 NTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMK 486

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
               +   + ++L DMY  CG    A  +F     +DLI W +MI +   + +   A+ L
Sbjct: 487 HSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLL 546

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           F++M +E+  P+ +T + +L + +H   + +G+  
Sbjct: 547 FHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSL 580



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 258/542 (47%), Gaps = 12/542 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   GS+  + QLF+ V  R    WN+M+ AY + G     ++ + RM+  G+  D  T
Sbjct: 299 MYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERT 358

Query: 61  FPCVIKACAMLKD-LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              ++  C  L   L  G  +H  V+K G      + N+L++MY +       +++FDRM
Sbjct: 359 VVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRM 418

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +  D++ WN++I A + +    +A  LF  M+   +  N+YT ++ L ACED +    G
Sbjct: 419 -KGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFG 477

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH   +K    +   +  AL  MY  CG    A  +     ++D +SWN+M+  +V+N
Sbjct: 478 RSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKN 537

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV--SDLQ 297
           +   KA+  F  +    + P+ V  +N +S+   L  L  G+ LHAY  ++GF    DL 
Sbjct: 538 NQAHKALLLFHRMISEAE-PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLS 596

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N  + MYA+C  +     +F  +  ++ ISW  +IAGY  N     A+  F  +  +G
Sbjct: 597 LANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDG 656

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYS 415
              + +   SVL ACS    +    ++   +++      +LV  + IVD+  + G ID +
Sbjct: 657 FRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEA 716

Query: 416 RNVFESIE-SKDVVSWTSMISSYVHNGLANEALELFYLMNEAN-VESDSITLVSALSAAS 473
           R   +S+    D   W +++SS      A +A  +F  +++   + + +  L+S + A +
Sbjct: 717 REFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATA 776

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC-GALDIANKVFNCVQTKDLILWT 532
            L +  + + +  ++  KG      ++  +V     C  A D ++   + +  K  IL +
Sbjct: 777 GLWL--EVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLS 834

Query: 533 SM 534
           SM
Sbjct: 835 SM 836


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 287/845 (33%), Positives = 452/845 (53%), Gaps = 43/845 (5%)

Query: 28  AMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKC 87
           AMLG  +     +    T ++  +L  S      P  +K C  + +L      H  + K 
Sbjct: 2   AMLGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDEL---KMFHRSLTKQ 58

Query: 88  GYDSTDFIVNSLVAMYAKC---YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           G D+    +  LVA   +         A+++F+         ++NS+I  Y++SG C EA
Sbjct: 59  GLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEA 118

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
           + LF  M   G+  + YTF   L AC  S  +  G++IH   VK G    ++V N+L+  
Sbjct: 119 ILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ-FFRELQGAGQKPDQVC 263
           YA CG++  A  V  ++  ++ VSW SM+ G+ + D    A+  FFR ++     P+ V 
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
            V  +SA  +L +L  G++++A+    G  V+DL + + L+DMY KC  ++   R+F + 
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEY 297

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
            A +      + + Y +     +AL +F  +   G+  D + + S + +CS L+ +   K
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357

Query: 383 EIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
             HGY++R G      I NA++D+Y KC   D +  +F+ + +K VV+W S+++ YV NG
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417

Query: 442 LANEALELFYLMNEAN--------------------------------VESDSITLVSAL 469
             + A E F  M E N                                V +D +T++S  
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           SA   L  L   K +  +I + G  L+  + ++LVDM++RCG  + A  +FN +  +D+ 
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            WT+ I A  + G  + AI+LF  M  +   PD + F+  L ACSH GL+ +GK+    M
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
              + + P   HY C+VDLLGRA  LEEA Q +  M +EP   +W +LL ACRV  N E+
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
               A+K+  L P   G+YVL+SNV+A++ +W D+ +VR+ M+  GL+K PG+S I+I  
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           K H F + D+SH E   I   L E++++     G+V     VL +V+E+EK+ ML  HSE
Sbjct: 718 KTHEFTSGDESHPEMPNIEAMLDEVSQRASHL-GHVPDLSNVLMDVDEKEKIFMLSRHSE 776

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           +LA+AYG++ S +G+ IRI KNLRVC DCHSF K  S+++ RE+++RD NRFH+   G C
Sbjct: 777 KLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKC 836

Query: 830 SCGDY 834
           SCGD+
Sbjct: 837 SCGDF 841



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 173/597 (28%), Positives = 308/597 (51%), Gaps = 40/597 (6%)

Query: 11  AEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           A+++F+   S  T F +N+++  Y S+G     +  + RM   GIS D +TFP  + ACA
Sbjct: 86  AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
             +    G +IHGL++K GY    F+ NSLV  YA+C +   AR++FD M E+ +VV W 
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER-NVVSWT 204

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGMEIHAATVK 188
           S+I  Y+      +A+ LF  M R   VT N+ T V  + AC        G +++A    
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
           SG  +   + +AL+ MY +C  +  A  +  +    +    N+M + +V+  L  +A+  
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           F  +  +G +PD++  ++A+S+  +L N+L GK  H Y ++ GF S   I N L+DMY K
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN---------------------------- 340
           C   +   R+F +M+ +  ++W +I+AGY +N                            
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444

Query: 341 ---NCHLKALELFRTVQ-LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-D 395
              +   +A+E+F ++Q  EG++AD + + S+  AC  L  +   K I+ YI + G+  D
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + +   +VD++ +CG+ + + ++F S+ ++DV +WT+ I +    G A  A+ELF  M E
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALD 514
             ++ D +  V AL+A S   ++++GKE+   +++  G + E      +VD+  R G L+
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624

Query: 515 IANKVF-NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
            A ++  +     + ++W S++ A  + G  ++A     K++    AP+      LL
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV--LAPERTGSYVLL 679



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 232/472 (49%), Gaps = 39/472 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFT 60
           Y +CG +  A ++FD++S+R V +W +M+  Y         ++ + RM R   ++ ++ T
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             CVI ACA L+DL+ G K++  +   G +  D +V++LV MY KC     A++LFD  G
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              ++ L N++ S Y   G   EALG+F  M   G+  +  + ++A+ +C        G 
Sbjct: 299 -ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN- 239
             H   +++G      + NALI MY +C +   A  +  ++ NK  V+WNS++ G+V+N 
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417

Query: 240 ------------------------------DLYCKAMQFFRELQGA-GQKPDQVCTVNAV 268
                                          L+ +A++ F  +Q   G   D V  ++  
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           SA G LG L   K ++ Y  K G   D+++G TL+DM+++C        +F  +T +D  
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           +WT  I   A      +A+ELF  +  +GL  D +     L ACS    + Q KEI   +
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597

Query: 389 IR-KGLS-DLVILNAIVDVYGKCGNIDYSRNVFE--SIESKDVVSWTSMISS 436
           ++  G+S + V    +VD+ G+ G ++ +  + E   +E  DV+ W S++++
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAA 648



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 156/351 (44%), Gaps = 45/351 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC ++  A++LFD+     +   NAM   YV  G     L  ++ M   G+  D  +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I +C+ L+++  G   HG VL+ G++S D I N+L+ MY KC+    A ++FDRM 
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399

Query: 121 EKEDVVLWNSIISAYSASGQC-------------------------------LEALGLFR 149
            K  VV WNSI++ Y  +G+                                 EA+ +F 
Sbjct: 400 NKT-VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458

Query: 150 EMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            MQ + G+  +  T ++   AC       L   I+    K+G  L V +   L+ M++RC
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G    A  +   L N+D  +W + +          +A++ F ++   G KPD V  V A+
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVS--DLQIGNTLMDMYAKCCCVNYMGR 317
           +A    G +  GKE+    +K   VS  D+  G          C V+ +GR
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG----------CMVDLLGR 619



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 1/141 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ +CG    A  +F+ ++ R V  W A +GA    G   R +E +  M   G+  D   
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F   + AC+    +  G +I   +LK  G    D     +V +  +     +A QL + M
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633

Query: 120 GEKEDVVLWNSIISAYSASGQ 140
             + + V+WNS+++A    G 
Sbjct: 634 PMEPNDVIWNSLLAACRVQGN 654


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 261/753 (34%), Positives = 429/753 (56%), Gaps = 6/753 (0%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFTFP 62
           K   V +A  +FDK+  + + TW++M+  Y   G     L  +  + R  G   + F   
Sbjct: 74  KSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLA 133

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
            VI+AC  L  ++ GA++HG V++ G+D   ++  SL+  Y+K  +  +AR +FD++ EK
Sbjct: 134 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 193

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
              V W +II+ Y+  G+   +L LF +M+   +V + Y   + L AC    F   G +I
Sbjct: 194 T-AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQI 252

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA  ++ G  + V V N LI  Y +C ++     +  Q+  K+ +SW +M++G++QN   
Sbjct: 253 HAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFD 312

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +AM+ F E+   G KPD     + +++ G    L  G+++HAY IK    SD  + N L
Sbjct: 313 WEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGL 372

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMYAK   +    +VF  M  Q+ IS+  +I GY+      +ALELF  +++      +
Sbjct: 373 IDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSL 432

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFES 421
           +   S+L   + L  +  +K+IHG II+ G+S DL   +A++DVY KC  +  +R+VFE 
Sbjct: 433 LTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEE 492

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  KD+V W +M   Y  +    EAL+L+  +  +  + +  T  + ++AAS+L+ L+ G
Sbjct: 493 MNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHG 552

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           ++ +  +++ G +    V ++LVDMYA+CG+++ A K+FN    +D++ W SMI+ +  H
Sbjct: 553 QQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQH 612

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G  + A+ +F +M  E   P+++TF+A+L ACSH+G + +G      M   + + P  EH
Sbjct: 613 GEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEH 671

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           YAC+V LLGR+  L EA +F+  M IEP A VW +LL ACR+  N ELG+  A+  +  D
Sbjct: 672 YACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTD 731

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
           P + G+Y+L+SN+FA+   W DV++VR RM  S + K PG SWIE+ NK++ FIARD +H
Sbjct: 732 PKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTH 791

Query: 722 SESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
            E+D     + +I  +  +  GYV     +L N
Sbjct: 792 READ--IGSVLDILIQHIKGAGYVPDATALLMN 822



 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 185/628 (29%), Positives = 321/628 (51%), Gaps = 12/628 (1%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           IHG ++  G  S  F+ N L+ + +K      AR +FD+M  K +++ W+S++S YS  G
Sbjct: 49  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHK-NLITWSSMVSMYSQQG 107

Query: 140 QCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
              EAL +F ++QR  G   N +   + ++AC        G ++H   V+SG +  VYV 
Sbjct: 108 YSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 167

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
            +LI  Y++ G + EA  V  QL  K +V+W +++ G+ +      +++ F +++     
Sbjct: 168 TSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVV 227

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           PD+    + +SA   L  L  GK++HAY +++G   D+ + N L+D Y KC  V    ++
Sbjct: 228 PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKL 287

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F QM  ++ ISWTT+I+GY QN+   +A++LF  +   G   D     SVL +C   + +
Sbjct: 288 FDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREAL 347

Query: 379 SQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
            Q +++H Y I+  L SD  + N ++D+Y K   +  ++ VF+ +  ++V+S+ +MI  Y
Sbjct: 348 EQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGY 407

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
                 +EALELF+ M         +T VS L  ++SL  L+  K+++G II+ G +L+ 
Sbjct: 408 SSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDL 467

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
              S+L+D+Y++C  +  A  VF  +  KD+++W +M      H   + A+ L+  ++  
Sbjct: 468 FAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFS 527

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              P+  TF AL+ A S+   +  G++F   +     LD  P     LVD+  +   +EE
Sbjct: 528 RQKPNEFTFAALITAASNLASLRHGQQFHNQL-VKMGLDFCPFVTNALVDMYAKCGSIEE 586

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           A +   S  I      W +++     H   E    + +++++   G   NYV    V +A
Sbjct: 587 ARKMFNS-SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMK--EGIQPNYVTFVAVLSA 643

Query: 678 SRKWKDVEQVRMR---MRGSGLKKTPGS 702
                 VE        M G G+K  PG+
Sbjct: 644 CSHAGRVEDGLNHFNSMPGFGIK--PGT 669



 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 166/556 (29%), Positives = 291/556 (52%), Gaps = 10/556 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G++ +A  +FD++S++T  TW  ++  Y   G     LE +++MR   +  D +  
Sbjct: 174 YSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVV 233

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ AC+ML+ L+ G +IH  VL+ G +    +VN L+  Y KC   +  R+LFD+M  
Sbjct: 234 SSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVV 293

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K +++ W ++IS Y  +    EA+ LF EM R+G   + +   + L +C        G +
Sbjct: 294 K-NIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ 352

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA T+K+      +V N LI MYA+   + +A  V   +  ++ +S+N+M+ G+   + 
Sbjct: 353 VHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEK 412

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ F E++     P  +  V+ +  S  L  L   K++H   IK G   DL  G+ 
Sbjct: 413 LSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSA 472

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+D+Y+KC  V     VF +M  +D + W  +  GY Q+  + +AL+L+ T+Q      +
Sbjct: 473 LIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPN 532

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFE 420
                +++ A S L  +   ++ H  +++ GL     + NA+VD+Y KCG+I+ +R +F 
Sbjct: 533 EFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFN 592

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
           S   +DVV W SMIS++  +G A EAL +F  M +  ++ + +T V+ LSA S    ++ 
Sbjct: 593 SSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVED 652

Query: 481 GKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMINA 537
           G  LN F    GF ++      + +V +  R G L  A +    +  +   I+W S+++A
Sbjct: 653 G--LNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 710

Query: 538 NGLHGR---GKVAIDL 550
             + G    GK A ++
Sbjct: 711 CRIAGNVELGKYAAEM 726



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 201/370 (54%), Gaps = 5/370 (1%)

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           LQ    +P +    N +  S     +++ K +H   I  G  SD  + N L+++ +K   
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLM 370
           V+    VF +M  ++ I+W+++++ Y+Q     +AL +F  +Q + G   +  ++ SV+ 
Sbjct: 78  VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137

Query: 371 ACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC+ L  + +  ++HG+++R G   D+ +  +++D Y K GNI+ +R VF+ +  K  V+
Sbjct: 138 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVT 197

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           WT++I+ Y   G +  +LELF  M E NV  D   + S LSA S L  L+ GK+++ +++
Sbjct: 198 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVL 257

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           R+G  ++ SV + L+D Y +C  +    K+F+ +  K++I WT+MI+    +     A+ 
Sbjct: 258 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMK 317

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDL 608
           LF +M    + PD     ++L +C     + +G++     ++ + + D + ++   L+D+
Sbjct: 318 LFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKN--GLIDM 375

Query: 609 LGRANHLEEA 618
             ++N L +A
Sbjct: 376 YAKSNLLIDA 385



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 169/337 (50%), Gaps = 18/337 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   ++DA+++FD ++++ V ++NAM+  Y S  +    LE +  MRV        T
Sbjct: 375 MYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLT 434

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++   A L  L+   +IHGL++K G     F  ++L+ +Y+KC   + AR +F+ M 
Sbjct: 435 FVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN 494

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK D+V+WN++   Y+   +  EAL L+  +Q      N +TF A + A  + +    G 
Sbjct: 495 EK-DIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQ 553

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   VK G +   +V NAL+ MYA+CG + EA  +      +D V WNSM++   Q+ 
Sbjct: 554 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 613

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG----KELHAYAIKQGFVSDL 296
              +A+  FRE+   G +P+ V  V  +SA    G + +G      +  + IK G     
Sbjct: 614 EAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPG----- 668

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
                  + YA  C V+ +GR      A++FI    I
Sbjct: 669 ------TEHYA--CVVSLLGRSGKLFEAKEFIEKMPI 697



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 124/236 (52%), Gaps = 2/236 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  V DA  +F++++++ +  WNAM   Y  + E    L+ YS ++      + FT
Sbjct: 476 VYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFT 535

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +I A + L  L  G + H  ++K G D   F+ N+LV MYAKC    +AR++F+   
Sbjct: 536 FAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSI 595

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV WNS+IS ++  G+  EALG+FREM + G+  N  TFVA L AC  +     G+
Sbjct: 596 WR-DVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGL 654

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
               +    G          ++++  R GK+ EA   + ++     ++ W S+L+ 
Sbjct: 655 NHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 710


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 272/804 (33%), Positives = 435/804 (54%), Gaps = 78/804 (9%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N ++  Y K      A +LF RM  + DV  WN+++S Y  S Q L +L  F  M R G 
Sbjct: 75  NVMLNGYVKLGRLSDAVELFGRMPAR-DVASWNTLMSGYFQSQQYLASLESFVSMHRSGD 133

Query: 157 VT-NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
            + NA+TF  A+++C      +L +++     K G      VA AL+ M+ RCG +  A+
Sbjct: 134 SSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLAS 193

Query: 216 -------------------------GVLYQLE------NKDSVSWNSMLTGFVQNDLYCK 244
                                    GV + LE       +D VSWN M++   Q+    +
Sbjct: 194 RLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVRE 253

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+    ++Q  G + D     ++++A  RL +L  GK+LHA  I+     D  + + L++
Sbjct: 254 ALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVE 313

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +YAKC C      VF  +  ++ ++WT +IAG+ Q+ C  +++ELF  ++ E +  D   
Sbjct: 314 LYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFA 373

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + +++  C     +   +++H   ++ G +  +V+ N+++ +Y KC N+  + ++F  + 
Sbjct: 374 LATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMN 433

Query: 424 SKDVVSWTSMIS-------------------------------SYVHNGLANEALELFYL 452
            KD+VSWTSMI+                               +Y+ +G   + L ++ +
Sbjct: 434 EKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNV 493

Query: 453 M-NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           M +E +V  D +T V+     + L   K G ++ G  ++ G  L+ SVA++++ MY++CG
Sbjct: 494 MLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCG 553

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            +  A KVF+ +  KD++ W +MI     HG GK AI++F  +      PD+I+++A+L 
Sbjct: 554 RILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
            CSHSGL+ EGK + ++M+  + + P  EH++C+VDLLGRA HL EA   +  M ++PTA
Sbjct: 614 GCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTA 673

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
           EVW ALL AC++H N EL E+ AK + ELD  + G+Y+L++ ++A + K  D  Q+R  M
Sbjct: 674 EVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLM 733

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           R  G+KK PG SW+E+ NK+H F A D SH +   I KKL E+ EK+ R G       +V
Sbjct: 734 RDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLG-------YV 786

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
             +    E       HSE+LA+A+G++       I I KNLR+C DCH+  KL+S + GR
Sbjct: 787 RTDSPRSE-----IHHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGR 841

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E V+RDA RFHHF  G CSCGDYW
Sbjct: 842 EFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 177/657 (26%), Positives = 326/657 (49%), Gaps = 71/657 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFT 60
           Y K G + DA +LF ++  R V +WN ++  Y  + + L  LE++  M   G  S +AFT
Sbjct: 81  YVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFT 140

Query: 61  FPCVIKACAML-------------------KDLDCGAKIHGLVLKCGY------------ 89
           F   +K+C  L                    D D  A +  + ++CG             
Sbjct: 141 FAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIK 200

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           + T F  NS++  Y K Y    A +LFD M E+ DVV WN ++SA S SG+  EAL +  
Sbjct: 201 EPTIFCRNSMLVGYVKTYGVDHALELFDSMPER-DVVSWNMMVSALSQSGRVREALDMVV 259

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +MQ  G+  ++ T+ ++L AC   S    G ++HA  +++   +  YVA+AL+ +YA+CG
Sbjct: 260 DMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCG 319

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
              EA GV   L ++++V+W  ++ GF+Q+  + ++++ F +++      DQ      +S
Sbjct: 320 CFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLIS 379

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
                 +L  G++LH+  +K G +  + + N+L+ MYAKC  +     +F  M  +D +S
Sbjct: 380 GCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVS 439

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLE---------------GLDADVMIIGSVLMA--- 371
           WT++I  ++Q     KA E F  +  +               G + D + + +V+++   
Sbjct: 440 WTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKD 499

Query: 372 --------------CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
                         C+ L       +I G  ++ GL  D  + NA++ +Y KCG I  +R
Sbjct: 500 VRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEAR 559

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF+ +  KD+VSW +MI+ Y  +G+  +A+E+F  + +   + D I+ V+ LS  S   
Sbjct: 560 KVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG 619

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTS 533
           ++++GK     ++++  N+   +   S +VD+  R G L  A  + + +  K    +W +
Sbjct: 620 LVQEGKSYFD-MMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGA 678

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           +++A  +HG  ++A +L  K   E  +PD  +++ +    + +G  ++  +  ++MR
Sbjct: 679 LLSACKIHGNNELA-ELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMR 734



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 230/520 (44%), Gaps = 78/520 (15%)

Query: 1   MYGKCGSVLDAE-------------------------------QLFDKVSQRTVFTWNAM 29
           M+ +CG+V  A                                +LFD + +R V +WN M
Sbjct: 182 MFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMM 241

Query: 30  LGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
           + A   +G     L+    M+  G+ +D+ T+   + ACA L  L  G ++H  V++   
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 301

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
               ++ ++LV +YAKC  F++A+ +F+ + ++ +V  W  +I+ +   G   E++ LF 
Sbjct: 302 CIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVA-WTVLIAGFLQHGCFTESVELFN 360

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +M+   +  + +     +  C       LG ++H+  +KSGQ   V V+N+LI+MYA+C 
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 420

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL----------------- 252
            +  A  +   +  KD VSW SM+T   Q     KA +FF  +                 
Sbjct: 421 NLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQ 480

Query: 253 QGAGQ---------------KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            GA +               +PD V  V        LG    G ++    +K G + D  
Sbjct: 481 HGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTS 540

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N ++ MY+KC  +    +VF  +  +D +SW  +I GY+Q+    +A+E+F  +   G
Sbjct: 541 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 600

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
              D +   +VL  CS       G       K +H   I  GL      + +VD+ G+ G
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHN--ISPGLEH---FSCMVDLLGRAG 655

Query: 411 NIDYSRNVFESIESKDVVS-WTSMISSYVHNGLANEALEL 449
           ++  ++++ + +  K     W +++S+   +G  NE  EL
Sbjct: 656 HLTEAKDLIDEMPMKPTAEVWGALLSACKIHG-NNELAEL 694


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/635 (38%), Positives = 388/635 (61%), Gaps = 33/635 (5%)

Query: 201  LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
            L+  YA CG+      +  ++  K+ V +N M+  +V N LY  A+  F+ + G G  PD
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125

Query: 261  QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
                   + AS    +L  G ++HA  ++ G   ++ +GN L+ MY KC C+    RV  
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185

Query: 321  QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
            ZM  +D +SW +++AG A+N     ALE+ + ++L GL  D   + S+L A         
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA--------- 1236

Query: 381  TKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
                             + N  +D      N+ + + +F  + +K +VSW  MI+ Y++N
Sbjct: 1237 -----------------VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNN 1273

Query: 441  GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
             +  EA+++F  M +  V+ D+I++ S L A   LS L  G+ ++ +++RK       + 
Sbjct: 1274 SMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLE 1333

Query: 501  SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
            ++L+DMYA+CG L+ A +VF+ ++ +D++ WTSMI+A G++G+G+ A+ LF +M+     
Sbjct: 1334 NALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLN 1393

Query: 561  PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
            PD I F+++L ACSH+GL++EG+ + ++M  + ++ P  EH+ C+VDLLGRA  ++EAY 
Sbjct: 1394 PDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYG 1453

Query: 621  FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
            F++ M +EP   VW ALL ACRV+SN  +G + A +L +L P   G YVL+SN++A + +
Sbjct: 1454 FIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGR 1513

Query: 681  WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
            W+DV  VR  M+  G+KK PG S  E+ N++H+F+A D+SH +S +IY++L  +  K+ +
Sbjct: 1514 WEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKM-K 1572

Query: 741  EGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHS 800
            E GYV +T   LH+VEEE+K   L  HSE+LAIA+ +L +  GS IRITKNLRVC DCH 
Sbjct: 1573 EAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHI 1632

Query: 801  FCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
              KL+S++ GRE+ +RD NRFHHF  GVCSCGDYW
Sbjct: 1633 AAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 206/418 (49%), Gaps = 44/418 (10%)

Query: 2    YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
            Y  CG       +FD++ ++ V  +N M+ +YV+N      L  +  M   GI  D +T+
Sbjct: 1070 YAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTY 1129

Query: 62   PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
            PCV+KA +  +DL  G +IH  V++ G D   F+ N L++MY KC    +A ++ D M  
Sbjct: 1130 PCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPC 1189

Query: 122  KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            + DVV WNS+++  + +GQ  +AL + +EM+ +GL  +A T  + L A  ++  + +   
Sbjct: 1190 R-DVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSF- 1247

Query: 182  IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
                 VK                            +  +L NK  VSWN M+  ++ N +
Sbjct: 1248 -----VKE---------------------------MFMKLANKSLVSWNVMIAVYMNNSM 1275

Query: 242  YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
              +A+  F +++     PD +   + + A G L  LL G+ +H Y +++    +L + N 
Sbjct: 1276 PAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENA 1335

Query: 302  LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
            L+DMYAKC C+ Y   VF QM  +D +SWT++I+ Y  N     A+ LF  +Q  GL+ D
Sbjct: 1336 LIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPD 1395

Query: 362  VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI------VDVYGKCGNID 413
             +   SVL ACS    + + +    Y  +    +  I+  I      VD+ G+ G +D
Sbjct: 1396 SIAFVSVLSACSHAGLLDEGR----YYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVD 1449



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 34/281 (12%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MYGKCG +++A ++ D++  R V +WN+++     NG+    LE    M +LG+  DA T
Sbjct: 1170 MYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGT 1229

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               ++ A                V     D+  F+                 +++F ++ 
Sbjct: 1230 MASLLPA----------------VTNTCLDNVSFV-----------------KEMFMKLA 1256

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             K  +V WN +I+ Y  +    EA+ +F +M+   +  +A +  + L AC D S   LG 
Sbjct: 1257 NKS-LVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGR 1315

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             IH   V+      + + NALI MYA+CG +  A  V  Q++ +D VSW SM++ +  N 
Sbjct: 1316 RIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNG 1375

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
                A+  F  +Q  G  PD +  V+ +SA    G L  G+
Sbjct: 1376 KGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR 1416


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/692 (35%), Positives = 411/692 (59%), Gaps = 38/692 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARC--GKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IH+  +K+G +   +  + LI   A    G ++ A  +   + N + V WN M+ G   
Sbjct: 46  QIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSS 105

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           ++    A++++  +  +G +P++    +   +  ++     GK++HA+ +K G   +  +
Sbjct: 106 SESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFV 165

Query: 299 GNTLMDMYAK-----------------------CCCVNYMGR--------VFYQMTAQDF 327
             +L++MYA+                            Y  +        +F ++  +D 
Sbjct: 166 HTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDV 225

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE-IHG 386
           +SW  +I+GYAQ+    +A+  F  ++   +  +V  + SVL AC+      Q    +  
Sbjct: 226 VSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRS 285

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           +I  +GL S++ ++N ++D+Y KCG+++ + N+FE I+ K+VVSW  MI  Y H     E
Sbjct: 286 WIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKE 345

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSL 503
           AL LF  M ++N++ + +T +S L A ++L  L  GK ++ ++ +   +++ +VA  +SL
Sbjct: 346 ALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSL 405

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           +DMYA+CG L +A ++F+C+ TK L  W +MI+   +HG    A+ LF +M +E F PD 
Sbjct: 406 IDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDD 465

Query: 564 ITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
           ITF+ +L AC H+GL++ G+++   M  DY++ P   HY C++DL GRA   +EA   V+
Sbjct: 466 ITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVK 525

Query: 624 SMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKD 683
           +M+++P   +WC+LLGACR+H   EL E VAK L EL+P NP  YVL+SN++A + +W+D
Sbjct: 526 NMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWED 585

Query: 684 VEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGG 743
           V ++R R+  + +KK PG S IE+ + +H F+  DK H +S+EIYK L EI  +LE+  G
Sbjct: 586 VAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEK-AG 644

Query: 744 YVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
           +V  T  VL++++EE K  +L  HSE+LAIA+G++ +  G+ IRI KNLRVC +CHS  K
Sbjct: 645 FVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATK 704

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L+S++F RE++ RD NRFHHF+ G CSC DYW
Sbjct: 705 LISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 218/467 (46%), Gaps = 36/467 (7%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A  LF  +       WN M+    S+  P   LE Y  M   G   + +TFP + 
Sbjct: 76  GDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIF 135

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-- 123
           K+C  ++    G ++H  VLK G +   F+  SL+ MYA+  +   AR +FD+   ++  
Sbjct: 136 KSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAV 195

Query: 124 ----------------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
                                       DVV WN++IS Y+ SG+  EA+  F EM+R  
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAK 255

Query: 156 LVTNAYTFVAALQACEDS-SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEA 214
           +  N  T ++ L AC  S S   LG  + +     G    + + N LI MY +CG + EA
Sbjct: 256 VTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEA 315

Query: 215 AGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
           + +  ++++K+ VSWN M+ G+     Y +A+  FR +  +   P+ V  ++ + A   L
Sbjct: 316 SNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANL 375

Query: 275 GNLLNGKELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           G L  GK +HAY  K  +   + + +  +L+DMYAKC  +    R+F  M  +   +W  
Sbjct: 376 GALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNA 435

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-- 390
           +I+G+A +     AL LF  +  EG   D +    VL AC     +S  +     +I+  
Sbjct: 436 MISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDY 495

Query: 391 KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           K    L     ++D++G+ G  D +  + +++E K D   W S++ +
Sbjct: 496 KVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGA 542



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 153/311 (49%), Gaps = 5/311 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G + +A +LFD++  R V +WNAM+  Y  +G     +  +  MR   ++ +  T 
Sbjct: 204 YASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTM 263

Query: 62  PCVIKACAML-KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             V+ ACA     L  G  +   +   G  S   +VN L+ MY KC D  +A  LF+++ 
Sbjct: 264 LSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQ 323

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K +VV WN +I  Y+      EALGLFR M +  +  N  TF++ L AC +     LG 
Sbjct: 324 DK-NVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGK 382

Query: 181 EIHAATVKSGQNLQVYVA--NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            +HA   K+ ++++  VA   +LI MYA+CG +  A  +   +  K   +WN+M++GF  
Sbjct: 383 WVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAM 442

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD-LQ 297
           +     A+  F  +   G  PD +  V  ++A    G L  G+   +  I+   VS  L 
Sbjct: 443 HGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLP 502

Query: 298 IGNTLMDMYAK 308
               ++D++ +
Sbjct: 503 HYGCMIDLFGR 513



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 117/239 (48%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A  LF+K+  + V +WN M+G Y         L  + RM    I  +  T
Sbjct: 305 MYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVT 364

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKC--GYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           F  ++ ACA L  LD G  +H  V K      +T  +  SL+ MYAKC D   A+++FD 
Sbjct: 365 FLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDC 424

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K  +  WN++IS ++  G    ALGLF  M   G V +  TFV  L AC+ +   +L
Sbjct: 425 MNTKS-LATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSL 483

Query: 179 GMEIHAATV---KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
           G    ++ +   K    L  Y    +I ++ R G   EA  ++  +E K D   W S+L
Sbjct: 484 GRRYFSSMIQDYKVSPKLPHY--GCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLL 540



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 43/310 (13%)

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVD--VYGKCGNIDYSRNVFESIESK 425
           L   S  K +   K+IH  II+ GL +    L+ +++       G++ Y+ ++F++I + 
Sbjct: 32  LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           + V W  MI     +     ALE +  M  +  E +  T  S   + + +    +GK+++
Sbjct: 92  NHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVH 151

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGA-------------------------------LD 514
             +++ G      V +SL++MYA+ G                                LD
Sbjct: 152 AHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLD 211

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A ++F+ +  +D++ W +MI+     GR + A+  F +M      P+  T L++L AC+
Sbjct: 212 EARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACA 271

Query: 575 HSG----LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            SG    L N  + ++E    D  L         L+D+  +   LEEA      +Q +  
Sbjct: 272 QSGSSLQLGNWVRSWIE----DRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQ-DKN 326

Query: 631 AEVWCALLGA 640
              W  ++G 
Sbjct: 327 VVSWNVMIGG 336


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 260/704 (36%), Positives = 410/704 (58%), Gaps = 39/704 (5%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENK 224
           L  C+  SF+ L  +IH+  +K+G +   +  + LI   A    G ++ A  +   +E  
Sbjct: 39  LSTCK--SFQNL-KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
           +   WN+M+ G   +     A+ F+  +   G +P+       + +  ++G    GK++H
Sbjct: 96  NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCC-------------------------------CVN 313
            + +K G  SD  +  +L++MYA+                                 C++
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
              R+F ++  +D +SW  +IAGYAQ+    +AL  F+ ++   +  +   + +VL AC+
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275

Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
               +     +  +I   GL S+L ++NA++D+Y KCG++D +R++FE I  KD++SW  
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNV 335

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MI  Y H     EAL LF  M ++NVE + +T VS L A + L  L  GK ++ +I +K 
Sbjct: 336 MIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKF 395

Query: 493 FNLEG-SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
             L   S+ +SL+DMYA+CG ++ A +VF  ++ K L  W +MI+   +HG   +A++LF
Sbjct: 396 LGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELF 455

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
            +M  E F PD ITF+ +L ACSH+GL+  G++    M  DY + P  +HY C++DLLGR
Sbjct: 456 RQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGR 515

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
           A   +EA   +++M+++P   +W +LLGACRVH N ELGE  AK L EL+P NPG YVL+
Sbjct: 516 AGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLL 575

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           SN++A + +W DV ++R ++   G+KK PG S IE+ + +H F+  DK H +S +IYK L
Sbjct: 576 SNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKML 635

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKN 791
            EI + LE+  G+V  T  VL++++EE K   L  HSE+LAIA+G++ +   + IRI KN
Sbjct: 636 DEIDQLLEK-AGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKN 694

Query: 792 LRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           LRVC +CHS  KL+S++F RE++ RD NRFHHF+ G CSC DYW
Sbjct: 695 LRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/552 (27%), Positives = 279/552 (50%), Gaps = 48/552 (8%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA--KCYDFRKARQLFDRMGE 121
           ++  C   ++L    +IH  ++K G  +T F ++ L+   A     +   A  LF+ + E
Sbjct: 38  LLSTCKSFQNLK---QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESI-E 93

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + +  +WN++I   S S   + A+  +  M   G+  N+YTF   L++C        G +
Sbjct: 94  QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGK------------------------------- 210
           IH   +K G     +V  +LI MYA+ G+                               
Sbjct: 154 IHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGC 213

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           + +A  +  ++  +D+VSWN+M+ G+ Q+  + +A+ FF+E++ A   P++   V  +SA
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
             + G+L  G  + ++    G  S+L++ N L+DMY+KC  ++    +F  +  +D ISW
Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISW 333

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
             +I GY+  N + +AL LFR +Q   ++ + +   S+L AC+ L  +   K IH YI +
Sbjct: 334 NVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDK 393

Query: 391 K--GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           K  GL++  +  +++D+Y KCGNI+ ++ VF  ++ K + SW +MIS    +G AN ALE
Sbjct: 394 KFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALE 453

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDM 506
           LF  M +   E D IT V  LSA S   +++ G++    ++ + +++   +     ++D+
Sbjct: 454 LFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMV-EDYDISPKLQHYGCMIDL 512

Query: 507 YARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPD 562
             R G  D A  +   ++ K D  +W S++ A  +HG    G+ A    +++E E+  P 
Sbjct: 513 LGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPEN--PG 570

Query: 563 HITFLALLYACS 574
               L+ +YA +
Sbjct: 571 AYVLLSNIYATA 582



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 230/463 (49%), Gaps = 46/463 (9%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           LF+ + Q   F WN M+     +  P+  ++ Y RM + G+  +++TFP ++K+CA +  
Sbjct: 88  LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK---------------------------C 106
              G +IHG VLK G +S  F+  SL+ MYA+                            
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207

Query: 107 YDFR----KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYT 162
           Y  R     AR+LF+ +  + D V WN++I+ Y+ SG+  EAL  F+EM+R  +  N  T
Sbjct: 208 YTLRGCLDDARRLFEEIPVR-DAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNEST 266

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
            V  L AC  S    LG  + +     G    + + NALI MY++CG + +A  +   + 
Sbjct: 267 MVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGIC 326

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
            KD +SWN M+ G+   + Y +A+  FR++Q +  +P+ V  V+ + A   LG L  GK 
Sbjct: 327 EKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKW 386

Query: 283 LHAYAIKQGF-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           +HAY  K+   +++  +  +L+DMYAKC  +    +VF  M  +   SW  +I+G A + 
Sbjct: 387 IHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHG 446

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLS 394
               ALELFR ++ EG + D +    VL ACS       G +C S   E   Y I   L 
Sbjct: 447 HANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE--DYDISPKLQ 504

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
                  ++D+ G+ G  D +  + +++E K D   W S++ +
Sbjct: 505 H---YGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGA 544



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 116/239 (48%), Gaps = 10/239 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A  LF+ + ++ + +WN M+G Y         L  + +M+   +  +  T
Sbjct: 308 MYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVT 367

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           F  ++ ACA L  LD G  IH  + K   G  +T  +  SL+ MYAKC +   A+Q+F  
Sbjct: 368 FVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTS-LWTSLIDMYAKCGNIEAAKQVFAG 426

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K  +  WN++IS  +  G    AL LFR+M+  G   +  TFV  L AC  +    L
Sbjct: 427 MKPKS-LGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVEL 485

Query: 179 GMEIHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
           G +  ++ V+       LQ Y    +I +  R G   EA  ++  +E K D   W S+L
Sbjct: 486 GRQCFSSMVEDYDISPKLQHY--GCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 34/248 (13%)

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVD--VYGKCGNIDYSRNVFESIESK 425
           L   S  K     K+IH  II+ GL +    L+ +++       GN+ Y+  +FESIE  
Sbjct: 36  LTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           +   W +MI     +     A++ +  M    VE +S T    L + + +   ++GK+++
Sbjct: 96  NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGA-------------------------------LD 514
           G +++ G   +  V +SL++MYA+ G                                LD
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A ++F  +  +D + W +MI      GR + A+  F +M+  + AP+  T + +L AC+
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275

Query: 575 HSGLINEG 582
            SG +  G
Sbjct: 276 QSGSLELG 283


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/670 (37%), Positives = 395/670 (58%), Gaps = 34/670 (5%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ- 257
           N L++ Y++ G + +   V   + N D VSWNS+L+G+  N L  ++++ +  +   G  
Sbjct: 75  NTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSV 134

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
             +++     +  S   G +  G+++H    K G+ S L +G+ L+DMYAK   +N   R
Sbjct: 135 NLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANR 194

Query: 318 VFYQ-------------------------------MTAQDFISWTTIIAGYAQNNCHLKA 346
           +F +                               M  +D ISWTTII G  QN    +A
Sbjct: 195 IFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEA 254

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDV 405
           ++ F+ + +EG   D    GSVL AC G   + + K+IH YIIR    D + + +A++D+
Sbjct: 255 VDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDM 314

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y KC N+ Y+  VF  +  K+V+SWT+M+  Y  NG + EA+ +F  M    +  D  TL
Sbjct: 315 YCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTL 374

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S +S+ ++L+ L++G + +G  +  G     +V+++L+ +Y +CG+L+ A+++F+ ++ 
Sbjct: 375 GSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKI 434

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           +D + WT++++     G+    I LF  M A    PD +TF+ +L ACS +GL+ +G  +
Sbjct: 435 RDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHY 494

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
            E M  ++++ P P+HY C++DLL RA  LEEA  F+  M   P A  W  LL +CR++ 
Sbjct: 495 FECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNG 554

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           N E+G+  A+ L +L+P NP +Y+L+S+++AA  KW DV ++R  MR  G+KK PG SWI
Sbjct: 555 NLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWI 614

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
           +  NK+H F A D+S   SD+IY KL  +  K+  E GYV    FVLH+VE+ EK++ML 
Sbjct: 615 KYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEE-GYVPDMSFVLHDVEKSEKIKMLN 673

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
            HSE+LAIA+G+L   +G  IR+ KNLRVC DCH+  K +SR+  RE++VRDA RFH F+
Sbjct: 674 HHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFK 733

Query: 826 AGVCSCGDYW 835
            GVCSCGD+W
Sbjct: 734 DGVCSCGDFW 743



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 157/580 (27%), Positives = 277/580 (47%), Gaps = 70/580 (12%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +   +K C   ++     K+H  +++   +   F+ N+L+  Y K  D + AR +FD + 
Sbjct: 8   YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67

Query: 121 EK------------------------------EDVVLWNSIISAYSASGQCLEALGLFRE 150
           +                                DVV WNS++S Y+ +G   E++ ++  
Sbjct: 68  QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127

Query: 151 MQRVGLVT-NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA--- 206
           M + G V  N  TF   L    +  F  LG +IH    K G    ++V + L+ MYA   
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187

Query: 207 ----------------------------RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
                                       RC  + EA  +   +  KDS+SW +++TG  Q
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N L+ +A+  F+E+   G   DQ    + ++A G    L  GK++HAY I+  +  ++ +
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G+ L+DMY KC  V Y   VF +M  ++ ISWT ++ GY QN    +A+ +F  +Q   +
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEI 367

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRN 417
             D   +GSV+ +C+ L  + +  + HG  +  GL   V + NA++ +YGKCG+++++  
Sbjct: 368 HPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQ 427

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  ++ +D VSWT+++S Y   G ANE + LF  M    +  D +T V  LSA S   +
Sbjct: 428 LFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGL 487

Query: 478 LKKGKELNGFIIRKG-FNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMI 535
           ++KG      ++++          + ++D+ +R G L+ A    N +  + D I W +++
Sbjct: 488 VEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLL 547

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           ++  L+G    GK A +  +K+E ++  P     L+ +YA
Sbjct: 548 SSCRLNGNLEIGKWAAESLHKLEPQN--PASYILLSSIYA 585



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 148/540 (27%), Positives = 252/540 (46%), Gaps = 70/540 (12%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFT 60
           Y K G + D +++FD +    V +WN++L  Y  NG     +  Y+ M   G ++++  T
Sbjct: 81  YSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRIT 140

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK--------------- 105
           F  ++   +    +D G +IHG + K GY S  F+ + LV MYAK               
Sbjct: 141 FSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIP 200

Query: 106 ----------------CYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                           C    +A QLFD M EK D + W +II+  + +G   EA+  F+
Sbjct: 201 EKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEK-DSISWTTIITGLTQNGLFKEAVDKFK 259

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EM   G   + +TF + L AC        G +IHA  +++     ++V +AL+ MY +C 
Sbjct: 260 EMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCR 319

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            +  A  V  ++ +K+ +SW +ML G+ QN    +A++ F ++Q     PD     + +S
Sbjct: 320 NVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVIS 379

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           +   L +L  G + H  A+  G +  + + N L+ +Y KC  + +  ++F++M  +D +S
Sbjct: 380 SCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS 439

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS--GL--------KCMS 379
           WT +++GYAQ     + + LF T+   G+  D +    VL ACS  GL        +CM 
Sbjct: 440 WTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMV 499

Query: 380 QTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYV 438
           +   I        + D      ++D+  + G ++ ++N    +  S D + W +++SS  
Sbjct: 500 KEHRI------TPIPDH--YTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCR 551

Query: 439 HNG------LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
            NG       A E+L      N A     S  L+S++ AA       KGK  +   +RKG
Sbjct: 552 LNGNLEIGKWAAESLHKLEPQNPA-----SYILLSSIYAA-------KGKWDDVAKLRKG 599



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 3/236 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC +V  AE +F K+  + V +W AML  Y  NG     +  +  M+   I  D FT
Sbjct: 314 MYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFT 373

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +CA L  L+ GA+ HG  L  G      + N+L+ +Y KC     A QLF  M 
Sbjct: 374 LGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEM- 432

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  D V W +++S Y+  G+  E + LF  M   G+V +  TFV  L AC  +     G 
Sbjct: 433 KIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGY 492

Query: 181 EIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
                 VK  +   +      +I + +R G++ EA   + Q+  + D++ W ++L+
Sbjct: 493 HYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLS 548


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 264/786 (33%), Positives = 449/786 (57%), Gaps = 4/786 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YG  G V DA +LF ++ +R V +W A++ A  SNG     L  Y +MR  G+  +A  
Sbjct: 88  LYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNANA 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+  C  L++   G ++   V+  G  +   + NSL+ M+      + A +LFDRM 
Sbjct: 148 FATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRM- 206

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D +  N++IS YS  G C +   +F +M+  GL  +A T  + +  C  +   + G 
Sbjct: 207 EEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGS 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH+  ++S  +  V V NAL+ MY+  GK+++A  + + +  +D +SWN+M++ +VQN 
Sbjct: 267 GIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNC 326

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++   +L    + P+ +   +A+ A    G L++GK +HA  ++     +L +GN
Sbjct: 327 NSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGN 386

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MY KC  +    +VF  M   D +S+  +I GYA      KA+++F  ++  G+  
Sbjct: 387 SLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKP 446

Query: 361 DVMIIGSVLMA-CSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNV 418
           + + + ++  +  S     +  + +H YIIR G LSD  + N+++ +Y KCGN++ S N+
Sbjct: 447 NYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNI 506

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F SI +K++VSW ++I++    G   EAL+LF  M  A  + D + L   LS+ +SL+ L
Sbjct: 507 FNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASL 566

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           ++G +L+G  ++ G + +  V ++ +DMY +CG ++   ++      +    W ++I+  
Sbjct: 567 EEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGY 626

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             +G  K A + F +M A    PD++TF+ALL ACSH+GL+++G  +   M   + + P 
Sbjct: 627 AKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPG 686

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            +H  C+VDLLGR     EA +F+  M + P   +W +LL + R H N E+G   AKKLL
Sbjct: 687 IKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLL 746

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           ELDP +   YVL+SN++A + +W DV+++R  M+   + K P  SW+++ N++ +F   D
Sbjct: 747 ELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGD 806

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           + H  +++IY KL E+  KL RE GY+A T   LH+ +EE+K Q L+ HSE+LA+AYG++
Sbjct: 807 RGHKHAEKIYAKLDEMLLKL-REVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLI 865

Query: 779 KSTEGS 784
              EGS
Sbjct: 866 VVPEGS 871



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 171/631 (27%), Positives = 315/631 (49%), Gaps = 18/631 (2%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML---KDL 74
           +  RT  TW   +   V  G  +   E    MR  G+ +  F    ++ AC      + +
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 75  DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
            CGA IH L  + G     +I  +L+ +Y        AR+LF  M E+ +VV W +++ A
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPER-NVVSWTALMVA 119

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
            S++G   E L  +R+M+R G+  NA  F   +  C     E  G+++ +  + SG   Q
Sbjct: 120 LSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQ 179

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V VAN+LI M+   G++ +A  +  ++E  D++S N+M++ +    +  K    F +++ 
Sbjct: 180 VSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRH 239

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G +PD     + +S      +  +G  +H+  ++    S + + N L++MY+    ++ 
Sbjct: 240 HGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSD 299

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL----ELFRTVQLEGLDADVMIIGSVLM 370
              +F+ M+ +D ISW T+I+ Y QN     AL    +LF T ++     + +   S L 
Sbjct: 300 AEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEI----PNHLTFSSALG 355

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           ACS    +   K +H  +++  L  +L++ N+++ +YGKC +++ +  VF+S+ + DVVS
Sbjct: 356 ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVS 415

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL-SAASSLSILKKGKELNGFI 488
           +  +I  Y       +A+++F  +  A ++ + IT+++   S  SS  +   G+ L+ +I
Sbjct: 416 YNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYI 475

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           IR GF  +  VA+SL+ MYA+CG L+ +  +FN +  K+++ W ++I AN   G G+ A+
Sbjct: 476 IRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEAL 535

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLVD 607
            LF  M+      D +     L +C+    + EG +   + M+     D +  + A  +D
Sbjct: 536 KLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAA--MD 593

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           + G+   + E  Q V    I P  + W  L+
Sbjct: 594 MYGKCGKMNEMLQMVPDQAIRPQ-QCWNTLI 623



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/579 (23%), Positives = 274/579 (47%), Gaps = 18/579 (3%)

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE---TLGMEIHA 184
           W + +S     G+ + A  L R M+  G+  + +   + + ACE    +     G  IHA
Sbjct: 9   WYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHA 68

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
            T ++G    VY+  AL+ +Y   G +++A  + +++  ++ VSW +++     N    +
Sbjct: 69  LTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEE 128

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
            ++ +R+++  G   +       VS  G L N + G ++ ++ I  G  + + + N+L+ 
Sbjct: 129 TLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLIT 188

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           M+     V    ++F +M   D IS   +I+ Y+      K   +F  ++  GL  D   
Sbjct: 189 MFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATT 248

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + S++  C+     S    IH   +R  L S + ++NA+V++Y   G +  +  +F ++ 
Sbjct: 249 LCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMS 308

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            +D++SW +MISSYV N  + +AL+    +   N   + +T  SAL A SS   L  GK 
Sbjct: 309 RRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKM 368

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++  +++        V +SL+ MY +C +++ A KVF  + T D++ +  +I    +   
Sbjct: 369 VHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLED 428

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYA-CSHSGLINEGKKFLE-IMRCDYQLDPWPEH 601
           G  A+ +F  + +    P++IT + +  +  S + L N G+     I+R  +  D +  +
Sbjct: 429 GTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVAN 488

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL--GEIVAKKLLE 659
              L+ +  +  +LE +     S+  +     W A++ A     N +L  GE   K  ++
Sbjct: 489 --SLITMYAKCGNLESSTNIFNSITNKNIVS-WNAIIAA-----NAQLGHGEEALKLFID 540

Query: 660 LD-PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           +   GN  + V ++   ++      +E+  M++ G G+K
Sbjct: 541 MQHAGNKLDRVCLAECLSSCASLASLEE-GMQLHGLGMK 578


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/765 (33%), Positives = 441/765 (57%), Gaps = 4/765 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G++  A+ LFD + +R V +WN++L  Y+ NG   + +E + RMR L I  D  TF
Sbjct: 82  YAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATF 141

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+KAC+ ++D   G ++H L ++ G+++     ++LV MY+KC     A ++F  M E
Sbjct: 142 SVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPE 201

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + ++V W+++I+ Y  + + +E L LF++M +VG+  +  T+ +  ++C   S   LG +
Sbjct: 202 R-NLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQ 260

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +KS       +  A + MYA+C +M++A  V   L N    S+N+++ G+ + D 
Sbjct: 261 LHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQ 320

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA++ F+ LQ      D++    A++A   +   L G +LH  A+K G   ++ + NT
Sbjct: 321 GLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANT 380

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++DMY KC  +     +F  M  +D +SW  IIA + QN   +K L LF ++    ++ D
Sbjct: 381 ILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPD 440

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
               GSV+ AC+G + ++   EIHG I++ G+  D  + +A+VD+YGKCG +  +  + +
Sbjct: 441 DFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHD 500

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +E K  VSW S+IS +     +  A   F  M E  V  D+ T  + L   ++++ ++ 
Sbjct: 501 RLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIEL 560

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++  I++   + +  +AS+LVDMY++CG +  +  +F     +D + W++MI A   
Sbjct: 561 GKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAY 620

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG G+ AI LF +M+  +  P+H  F+++L AC+H G +++G  + +IM+  Y LDP  E
Sbjct: 621 HGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHME 680

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY+C+VDLLGR++ + EA + + SM  E    +W  LL  C++  N E+ E     LL+L
Sbjct: 681 HYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQL 740

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP +   YVL++NV+A    W +V ++R  M+   LKK PG SWIE+ +++H+F+  DK+
Sbjct: 741 DPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKA 800

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVL-HNVEEEEKVQML 764
           H  S+EIY++   + +++ +  GYV     +L   VEE++  + L
Sbjct: 801 HPRSEEIYEQTHLLVDEM-KWAGYVPDIDSMLDEEVEEQDPYEGL 844



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 178/652 (27%), Positives = 323/652 (49%), Gaps = 48/652 (7%)

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           FTF  +++ C+ LK L+ G + H  ++   +  T ++ N LV  Y K  +   A ++FDR
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 119 MGEKE------------------------------DVVLWNSIISAYSASGQCLEALGLF 148
           M  ++                              DVV WNS++S Y  +G   +++ +F
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
             M+ + +  +  TF   L+AC       LG+++H   ++ G    V   +AL+ MY++C
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
            K+  A  +  ++  ++ V W++++ G+VQND + + ++ F+++   G    Q    +  
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            +   L     G +LH +A+K  F  D  IG   +DMYAKC  ++   +VF  +      
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQ 306

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           S+  II GYA+ +  LKALE+F+++Q   L  D + +   L ACS +K   +  ++HG  
Sbjct: 307 SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLA 366

Query: 389 IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           ++ GL  ++ + N I+D+YGKCG +  +  +F+ +E +D VSW ++I+++  N    + L
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTL 426

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
            LF  M  + +E D  T  S + A +    L  G E++G I++ G  L+  V S+LVDMY
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMY 486

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
            +CG L  A K+ + ++ K  + W S+I+      + + A   F +M      PD+ T+ 
Sbjct: 487 GKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYA 546

Query: 568 ALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
            +L  C++   I  GK+   +I++ +   D +    + LVD+  +  +++++      + 
Sbjct: 547 TVLDVCANMATIELGKQIHAQILKLNLHSDVYIA--STLVDMYSKCGNMQDS-----RLM 599

Query: 627 IEPTAE----VWCALLGACRVHSNKELGEIVAKKLLELDPGN--PGNYVLIS 672
            E T +     W A++ A   H +   GE   K   E+   N  P + + IS
Sbjct: 600 FEKTPKRDYVTWSAMICAYAYHGH---GEQAIKLFEEMQLLNVKPNHTIFIS 648



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 168/604 (27%), Positives = 302/604 (50%), Gaps = 12/604 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  A ++F ++ +R +  W+A++  YV N   +  L+ +  M  +G+ V   T
Sbjct: 182 MYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQST 241

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V ++CA L     G ++HG  LK  +     I  + + MYAKC     A ++F+ + 
Sbjct: 242 YASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLP 301

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
                  +N+II  Y+   Q L+AL +F+ +QR  L  +  +   AL AC        G+
Sbjct: 302 NPPRQS-YNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGI 360

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   VK G    + VAN ++ MY +CG + EA  +   +E +D+VSWN+++    QN+
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNE 420

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              K +  F  +  +  +PD     + V A      L  G E+H   +K G   D  +G+
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGS 480

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY KC  +    ++  ++  +  +SW +II+G++       A   F  +   G+  
Sbjct: 481 ALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIP 540

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     +VL  C+ +  +   K+IH  I++  L SD+ I + +VD+Y KCGN+  SR +F
Sbjct: 541 DNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMF 600

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E    +D V+W++MI +Y ++G   +A++LF  M   NV+ +    +S L A + +  + 
Sbjct: 601 EKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVD 660

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           KG  L+ F I++  + L+  +   S +VD+  R   ++ A K+   +  + D ++W +++
Sbjct: 661 KG--LHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLL 718

Query: 536 NANGLHGRGKVAIDLFYK-MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR-CDY 593
           +   + G  +VA   F   ++ +         LA +YA  + G+  E  K   IM+ C  
Sbjct: 719 SNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYA--NVGMWGEVAKIRSIMKNCKL 776

Query: 594 QLDP 597
           + +P
Sbjct: 777 KKEP 780



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 252/536 (47%), Gaps = 36/536 (6%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY------------ 205
           T  +TF   LQ C +      G + HA  + +     +YVAN L+  Y            
Sbjct: 4   TKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKV 63

Query: 206 -------------------ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAM 246
                              A  G M  A  +   +  +D VSWNS+L+ ++ N +  K++
Sbjct: 64  FDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSI 123

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
           + F  ++      D       + A   + +   G ++H  AI+ GF +D+  G+ L+DMY
Sbjct: 124 EIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
           +KC  ++   R+F +M  ++ + W+ +IAGY QN+  ++ L+LF+ +   G+        
Sbjct: 184 SKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYA 243

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           SV  +C+GL       ++HG+ ++   + D +I  A +D+Y KC  +  +  VF ++ + 
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNP 303

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
              S+ ++I  Y       +ALE+F  +    +  D I+L  AL+A S +    +G +L+
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLH 363

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
           G  ++ G      VA++++DMY +CGAL  A  +F+ ++ +D + W ++I A+  +    
Sbjct: 364 GLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIV 423

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYAC 604
             + LF  M   +  PD  T+ +++ AC+    +N G +    I++    LD W    A 
Sbjct: 424 KTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLD-WFVGSA- 481

Query: 605 LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           LVD+ G+   L EA +    ++ E T   W +++         E  +    ++LE+
Sbjct: 482 LVDMYGKCGMLMEAEKIHDRLE-EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEM 536


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 260/749 (34%), Positives = 429/749 (57%), Gaps = 15/749 (2%)

Query: 96  VNSLVAMYAKCYDF---RKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM- 151
           ++S+  +  K +D       RQLF+++  K D+ L+N +I  +S +G    ++ L+  + 
Sbjct: 46  LSSITKLTHKFFDLGAVAHVRQLFNKVS-KPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
           ++  L  + +T+  A+ A      E +G+ +HA ++  G    ++V +A++ +Y +  + 
Sbjct: 105 KKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  V   +  +D+V WN+M++GF +N  +  +++ F ++   G   D       ++A 
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC--CCVNYMGRVFY-QMTAQDFI 328
             L     G  +   A K+G  SD+ +   L+ +Y+KC   C    GR+ + Q+   D I
Sbjct: 225 AELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC---KGRILFDQIDQPDLI 281

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           S+  +I+GY  N+    A+ LFR +   G   +   +  ++        +  ++ I    
Sbjct: 282 SYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLS 341

Query: 389 IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           ++ G+     +  A+  VY +   + ++R +F+    K + SW +MIS Y  NGL + A+
Sbjct: 342 LKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAI 401

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
            LF  M    +  + +T+ S LSA + L  L  GK ++G I  +       V+++LVDMY
Sbjct: 402 SLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMY 460

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           A+CG++  A ++F+ +  K+++ W +MI   GLHG GK A+ LFY+M      P  +TFL
Sbjct: 461 AKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFL 520

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
           ++LYACSHSGL++EG +    M  +Y   P  EHYAC+VD+LGRA  L  A +F+  M +
Sbjct: 521 SILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPL 580

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
           EP   VW ALLGAC +H N E+  + +K+L +LDP N G YVL+SN+++  R +     V
Sbjct: 581 EPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASV 640

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           R  ++   L KTPG + IEI ++ + F + D+SH ++  I++ L ++T K+ RE GY A+
Sbjct: 641 RQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKM-REAGYQAE 699

Query: 748 T-QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
           T    LH+VE+EEK  M+  HSE+LAIA+G++ +  G+ IRI KNLRVC+DCH+  K +S
Sbjct: 700 TVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFIS 759

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++  R +VVRDANRFHHF+ G+CSCGDYW
Sbjct: 760 KITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 266/511 (52%), Gaps = 5/511 (0%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAFTFPCV 64
           G+V    QLF+KVS+  +F +N ++  +  NG P   +  Y+ +R    +  D FT+   
Sbjct: 60  GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFA 119

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           I A + L+D   G  +H   +  G  S  F+ +++V +Y K      AR++FD M E+ D
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPER-D 178

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
            VLWN++IS +S +    +++ +F +M  VGL  ++ T    L A  +     LGM I  
Sbjct: 179 TVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQC 238

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
              K G +  VYV   LI++Y++CGK  +   +  Q++  D +S+N+M++G+  N     
Sbjct: 239 LASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETES 298

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  FREL  +GQ+ +    V  +       +L   + +   ++K G +    +   L  
Sbjct: 299 AVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTT 358

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +Y +   V +  ++F +   +   SW  +I+GY QN    +A+ LF+ + +  L  + + 
Sbjct: 359 VYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVT 417

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + S+L AC+ L  +S  K +HG I  + L S++ +  A+VD+Y KCG+I  +R +F+ + 
Sbjct: 418 VTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            K+VV+W +MI+ Y  +G   EAL+LFY M ++ +    +T +S L A S   ++ +G E
Sbjct: 478 DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNE 537

Query: 484 L-NGFIIRKGFNLEGSVASSLVDMYARCGAL 513
           + +      GF       + +VD+  R G L
Sbjct: 538 IFHSMANNYGFQPMSEHYACMVDILGRAGQL 568



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 222/457 (48%), Gaps = 14/457 (3%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A ++FD + +R    WN M+  +  N      +  +  M  +G+S D+ T   V+ A A 
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAE 226

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L++   G  I  L  K G  S  +++  L+++Y+KC    K R LFD++ ++ D++ +N+
Sbjct: 227 LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQI-DQPDLISYNA 285

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +IS Y+ + +   A+ LFRE+   G   N+ T V  +      +   L   I   ++K G
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
             LQ  V+ AL  +Y R  ++  A  +  +   K   SWN+M++G+ QN L  +A+  F+
Sbjct: 346 IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           E+      P+ V   + +SA  +LG L  GK +H     +   S++ +   L+DMYAKC 
Sbjct: 406 EMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCG 464

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            +    ++F  M  ++ ++W  +I GY  +    +AL+LF  +   G+    +   S+L 
Sbjct: 465 SIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILY 524

Query: 371 ACSGLKCMSQTKEI-HGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVFESIESKDV- 427
           ACS    +S+  EI H      G   +    A +VD+ G+ G +    N  E IE   + 
Sbjct: 525 ACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT---NALEFIERMPLE 581

Query: 428 ---VSWTSMISS-YVHNG--LANEALELFYLMNEANV 458
                W +++ +  +H    +AN A +  + ++  NV
Sbjct: 582 PGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENV 618



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 157/339 (46%), Gaps = 12/339 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG       LFD++ Q  + ++NAM+  Y  N E    +  +  +   G  V++ T
Sbjct: 258 LYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I        L     I  L LK G      +  +L  +Y +  + + ARQLFD   
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK  +  WN++IS Y+ +G    A+ LF+EM    L  N  T  + L AC      ++G 
Sbjct: 378 EK-SLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGK 435

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H           VYV+ AL+ MYA+CG + EA  +   + +K+ V+WN+M+TG+  + 
Sbjct: 436 WVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHG 495

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-HAYAIKQGFVSDLQIG 299
              +A++ F E+  +G  P  V  ++ + A    G +  G E+ H+ A   GF       
Sbjct: 496 HGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF------- 548

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
             + + YA  C V+ +GR      A +FI    +  G A
Sbjct: 549 QPMSEHYA--CMVDILGRAGQLTNALEFIERMPLEPGPA 585



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+++A QLFD +  + V TWNAM+  Y  +G     L+ +  M   GI     T
Sbjct: 459 MYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVT 518

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC+    +  G +I H +    G+         +V +  +      A +  +RM
Sbjct: 519 FLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERM 578

Query: 120 GEKEDVVLWNSIISA 134
             +    +W +++ A
Sbjct: 579 PLEPGPAVWGALLGA 593


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/713 (36%), Positives = 414/713 (58%), Gaps = 8/713 (1%)

Query: 20  QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAK 79
            R+ F WN ++ A    G       TY+ M   G+  D  T+P V+K C+   ++  G +
Sbjct: 100 SRSAFLWNTLIRANSIAGV-FDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGRE 158

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +HG+  K G+D   F+ N+L+A Y  C  F  A ++FD M E+ D V WN++I   S  G
Sbjct: 159 VHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPER-DKVSWNTVIGLCSLHG 217

Query: 140 QCLEALGLFREM--QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVY 196
              EALG FR M   + G+  +  T V+ L  C ++  + +   +H   +K G     V 
Sbjct: 218 FYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVK 277

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V NAL+ +Y +CG    +  V  +++ ++ +SWN+++T F     Y  A+  FR +   G
Sbjct: 278 VGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEG 337

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            +P+ V   + +   G LG    G E+H +++K    SD+ I N+L+DMYAK        
Sbjct: 338 MRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIAS 397

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            +F +M  ++ +SW  +IA +A+N    +A+EL R +Q +G   + +   +VL AC+ L 
Sbjct: 398 TIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLG 457

Query: 377 CMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            ++  KEIH  IIR G S DL + NA+ D+Y KCG ++ ++NVF +I  +D VS+  +I 
Sbjct: 458 FLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVF-NISVRDEVSYNILII 516

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y     + E+L LF  M    +  D ++ +  +SA ++L+ +++GKE++G ++RK F+ 
Sbjct: 517 GYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHT 576

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
              VA+SL+D+Y RCG +D+A KVF C+Q KD+  W +MI   G+ G    AI+LF  M+
Sbjct: 577 HLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMK 636

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
            +    D ++F+A+L ACSH GLI +G+K+ ++M CD  ++P   HYAC+VDLLGRA  +
Sbjct: 637 EDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMM-CDLNIEPTHTHYACMVDLLGRAGLM 695

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           EEA   +R + I P   +W ALLGACR+H N ELG   A+ L EL P + G Y+L+SN++
Sbjct: 696 EEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMY 755

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
           A + +W +  +VR  M+  G KK PG SW+++G+ +H+F+  +K  S  D+ +
Sbjct: 756 AEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHAFLVGEKIDSLDDDFW 808



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 187/577 (32%), Positives = 313/577 (54%), Gaps = 13/577 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL--GISVDA 58
            YG CG   DA ++FD++ +R   +WN ++G    +G     L  +  M     GI  D 
Sbjct: 181 FYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDL 240

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFD 117
            T   V+  CA  +D      +H   LK G       V N+LV +Y KC   + ++++FD
Sbjct: 241 VTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFD 300

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            + E+ +V+ WN+II+++S  G+ ++AL +FR M   G+  N+ T  + L    +     
Sbjct: 301 EIDER-NVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFK 359

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LGME+H  ++K      V+++N+LI MYA+ G    A+ +  ++  ++ VSWN+M+  F 
Sbjct: 360 LGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFA 419

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           +N L  +A++  R++Q  G+ P+ V   N + A  RLG L  GKE+HA  I+ G   DL 
Sbjct: 420 RNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLF 479

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N L DMY+KC C+N    VF  ++ +D +S+  +I GY++ N  L++L LF  ++L G
Sbjct: 480 VSNALTDMYSKCGCLNLAQNVF-NISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLG 538

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +  D++    V+ AC+ L  + Q KEIHG ++RK   + L + N+++D+Y +CG ID + 
Sbjct: 539 MRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLAT 598

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF  I++KDV SW +MI  Y   G  + A+ LF  M E  VE DS++ V+ LSA S   
Sbjct: 599 KVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGG 658

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTS 533
           +++KG++   F +    N+E +    + +VD+  R G ++ A  +   +    D  +W +
Sbjct: 659 LIEKGRKY--FKMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGA 716

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           ++ A  +H  G + + L+         P H  +  LL
Sbjct: 717 LLGACRIH--GNIELGLWAAEHLFELKPQHCGYYILL 751



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 154/346 (44%), Gaps = 20/346 (5%)

Query: 247 QFFRELQGAGQKPD--QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS-DLQIGNTLM 303
            FF         P+  Q+CT+           L   K++HAY++  GF+   + +  +L+
Sbjct: 26  SFFSTSLQTSNPPNLLQLCTL--------CDTLSQTKQVHAYSLLHGFLPRSVSLCASLI 77

Query: 304 DMYAKCCCVNYMGRVFYQMTA--QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
             YA     +    +F    A  +    W T+I   +           + T+   G+  D
Sbjct: 78  LQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAGV-FDGFGTYNTMVRAGVKPD 136

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
                 VL  CS    + + +E+HG   + G   D+ + N ++  YG CG    +  VF+
Sbjct: 137 ECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFD 196

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN--VESDSITLVSALSAASSLSIL 478
            +  +D VSW ++I     +G   EAL  F +M  A   ++ D +T+VS L   +     
Sbjct: 197 EMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDK 256

Query: 479 KKGKELNGFIIRKGFNLEG--SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
              + ++ + ++ G  L G   V ++LVD+Y +CG+   + KVF+ +  +++I W ++I 
Sbjct: 257 VMARIVHCYALKVGL-LGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIIT 315

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +    G+   A+D+F  M  E   P+ +T  ++L      GL   G
Sbjct: 316 SFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLG 361



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 25/252 (9%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFES--I 422
           ++L  C+    +SQTK++H Y +  G     + +  +++  Y   G+   S  +F+    
Sbjct: 39  NLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVA 98

Query: 423 ESKDVVSWTSMISSYVHNGLAN--EALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            S+    W ++I +   N +A   +    +  M  A V+ D  T    L   S    ++K
Sbjct: 99  YSRSAFLWNTLIRA---NSIAGVFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRK 155

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           G+E++G   + GF+ +  V ++L+  Y  CG    A KVF+ +  +D + W ++I    L
Sbjct: 156 GREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSL 215

Query: 541 HGRGKVAIDLFYKMEA--ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
           HG  + A+  F  M A      PD +T +++L  C+ +    E K    I+ C       
Sbjct: 216 HGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAET----EDKVMARIVHC------- 264

Query: 599 PEHYACLVDLLG 610
              YA  V LLG
Sbjct: 265 ---YALKVGLLG 273


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 264/796 (33%), Positives = 448/796 (56%), Gaps = 13/796 (1%)

Query: 50  RVLGISVDAFTF-----PCVIKACAMLKDL---DCGAKIHGLVLKCGYDSTDFIVNSLVA 101
           R++ I VDA        P + +    LKDL   +  AK   L  +  Y +T   VN +V+
Sbjct: 27  RIVDIPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTS-SVNMMVS 85

Query: 102 MYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAY 161
            Y K  +  +AR+LF+ M  + +V  W  +I  YS + Q  EA  L+ EM R G+  +  
Sbjct: 86  GYVKSRNLFRARELFESMFSRNEVS-WTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHI 144

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           TF   L   +D++     ++IH+  ++ G +  + V N+L+  Y +   +  A+ +  ++
Sbjct: 145 TFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEM 204

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             KDSVS+N M+TG+ +     +A++ F +++    +P        +  S    +++ G+
Sbjct: 205 PTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQ 264

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           ++H  AIK  +V D+ + N L+D Y+K   ++    +F +M   D +S+  II GYA N 
Sbjct: 265 QIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNG 324

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY-IIRKGLSDLVILN 400
            + K+ +LF+ +Q    D       ++L   +    +S  ++ H   ++   +S++ + N
Sbjct: 325 QYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGN 384

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A+VD+Y KC   + +  +F ++  ++ V WT++IS YV  G   EAL++F  MN  NV  
Sbjct: 385 ALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHG 444

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D  T  S L A+++L+ +  GK+L+  +IR G        S LVDMYA CG++  A +VF
Sbjct: 445 DQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVF 504

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
             +  ++++ W ++I+A   +G  +     F  M      PD ++FL++L ACSH GL+ 
Sbjct: 505 KEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVE 564

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           +   +   M   Y+LDP  +HYA ++D+L R+    EA   +  M  EP   +W ++L +
Sbjct: 565 KALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNS 624

Query: 641 CRVHSNKELGEIVAKKLLELDP-GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           CR+H N++L +  A +L ++D   +   YV +SN++A + KW++  +V+  MR  G+KK 
Sbjct: 625 CRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKV 684

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
              SW+EI +++H F A D++H ++++I +K+  + E +++E GY   T   L NV+EE 
Sbjct: 685 TAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKE-GYKPDTSCTLQNVDEEM 743

Query: 760 KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDAN 819
           K++ L  HSERLAIA+ ++ + EGS I I KNLR CVDCH+  K++S++ GRE+ VRD++
Sbjct: 744 KIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSS 803

Query: 820 RFHHFEAGVCSCGDYW 835
           RFHHF  G CSCGDYW
Sbjct: 804 RFHHFRDGSCSCGDYW 819



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 163/563 (28%), Positives = 279/563 (49%), Gaps = 11/563 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K  ++  A +LF+ +  R   +W  M+G Y  N +P      Y+ M   G+  D  TF
Sbjct: 87  YVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITF 146

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK--CYDFRKARQLFDRM 119
             ++        L    +IH  +++ G+ ++  + NSLV  Y K  C D   A QLF  M
Sbjct: 147 ATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDI--ASQLFSEM 204

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K D V +N +I+ Y+  G   EAL LF +M+ +    + +TF A L     S     G
Sbjct: 205 PTK-DSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFG 263

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH   +K+     ++VANAL+  Y++   +  A  +  ++   D VS+N ++TG+  N
Sbjct: 264 QQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWN 323

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             Y K+   F+ LQG             +S +    NL  G++ HA A+    VS++Q+G
Sbjct: 324 GQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVG 383

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+DMYAKC       R+F  +  ++ + WT II+ Y Q   H +AL++F+ +  E + 
Sbjct: 384 NALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVH 443

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNV 418
            D     S L A + L  +S  K++H  +IR G LS +   + +VD+Y  CG++  +  V
Sbjct: 444 GDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEV 503

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  +++V W ++IS+Y  NG A      F  M E+ +  DS++ +S L+A S   ++
Sbjct: 504 FKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLV 563

Query: 479 KKGK-ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
           +K     N        +      ++++D+  R G  + A  + + +    D ++W+S++N
Sbjct: 564 EKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLN 623

Query: 537 ANGLHGR---GKVAIDLFYKMEA 556
           +  +H      K A D  +KM+A
Sbjct: 624 SCRIHKNQDLAKKAADQLFKMDA 646



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 15/243 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC    DA ++F  ++ R    W A++  YV  G     L+ +  M    +  D  T
Sbjct: 389 MYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQAT 448

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +KA A L  +  G ++H  V++ G  S+ F  + LV MYA C   + A ++F  M 
Sbjct: 449 FASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP 508

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ ++V WN++ISAYS +G        F +M   GL  ++ +F++ L AC          
Sbjct: 509 DR-NIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGL----- 562

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA-------RCGKMTEAAGVLYQLE-NKDSVSWNSM 232
            +  A        QVY  +     YA       R G+  EA  ++ ++    D V W+S+
Sbjct: 563 -VEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSV 621

Query: 233 LTG 235
           L  
Sbjct: 622 LNS 624


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 260/749 (34%), Positives = 429/749 (57%), Gaps = 15/749 (2%)

Query: 96  VNSLVAMYAKCYDF---RKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
           ++S+  +  K +D       RQLF+++  K D+ L+N +I  +S +G    ++ L+  ++
Sbjct: 46  LSSITKLTHKFFDLGAVAHVRQLFNKVS-KPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104

Query: 153 R-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
           +   L  + +T+  A+ A      E +G+ +HA ++  G    ++V +A++ +Y +  + 
Sbjct: 105 KXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  V   +  +D+V WN+M++GF +N  +  +++ F ++   G   D       ++A 
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC--CCVNYMGRVFY-QMTAQDFI 328
             L     G  +   A K+G  SD+ +   L+ +Y+KC   C    GR+ + Q+   D I
Sbjct: 225 AELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC---KGRILFDQIDQPDLI 281

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           S+  +I+GY  N+    A+ LFR +   G   +   +  ++        +  ++ I    
Sbjct: 282 SYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLS 341

Query: 389 IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           ++ G+     +  A+  VY +   + ++R +F+    K + SW +MIS Y  NGL + A+
Sbjct: 342 LKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAI 401

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
            LF  M    +  + +T+ S LSA + L  L  GK ++G I  +       V+++LVDMY
Sbjct: 402 SLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMY 460

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           A+CG++  A ++F+ +  K+++ W +MI   GLHG GK A+ LFY+M      P  +TFL
Sbjct: 461 AKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFL 520

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
           ++LYACSHSGL++EG +    M  +Y   P  EHYAC+VD+LGRA  L  A +F+  M +
Sbjct: 521 SILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPL 580

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
           EP   VW ALLGAC +H N E+  + +K+L +LDP N G YVL+SN+++  R +     V
Sbjct: 581 EPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASV 640

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           R  ++   L KTPG + IEI ++ + F + D+SH ++  I++ L ++T K+ RE GY A+
Sbjct: 641 RQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKM-REAGYQAE 699

Query: 748 T-QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
           T    LH+VE+EEK  M+  HSE+LAIA+G++ +  G+ IRI KNLRVC+DCH+  K +S
Sbjct: 700 TVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFIS 759

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++  R +VVRDANRFHHF+ G+CSCGDYW
Sbjct: 760 KITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 156/546 (28%), Positives = 281/546 (51%), Gaps = 6/546 (1%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAFTFPCV 64
           G+V    QLF+KVS+  +F +N ++  +  NG P   +  Y+ +R    +  D FT+   
Sbjct: 60  GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFA 119

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           I A + L+D   G  +H   +  G  S  F+ +++V +Y K      AR++FD M E+ D
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPER-D 178

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
            VLWN++IS +S +    +++ +F +M  VGL  ++ T    L A  +     LGM I  
Sbjct: 179 TVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQC 238

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
              K G +  VYV   LI++Y++CGK  +   +  Q++  D +S+N+M++G+  N     
Sbjct: 239 LASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETES 298

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  FREL  +GQ+ +    V  +       +L   + +   ++K G +    +   L  
Sbjct: 299 AVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTT 358

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +Y +   V +  ++F +   +   SW  +I+GY QN    +A+ LF+ + +  L  + + 
Sbjct: 359 VYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVT 417

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + S+L AC+ L  +S  K +HG I  + L S++ +  A+VD+Y KCG+I  +R +F+ + 
Sbjct: 418 VTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            K+VV+W +MI+ Y  +G   EAL+LFY M ++ +    +T +S L A S   ++ +G E
Sbjct: 478 DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNE 537

Query: 484 L-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMINANGLH 541
           + +      GF       + +VD+  R G L  A +    +  +    +W +++ A  +H
Sbjct: 538 IFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH 597

Query: 542 GRGKVA 547
              ++A
Sbjct: 598 KNTEMA 603



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 222/457 (48%), Gaps = 14/457 (3%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A ++FD + +R    WN M+  +  N      +  +  M  +G+S D+ T   V+ A A 
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAE 226

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L++   G  I  L  K G  S  +++  L+++Y+KC    K R LFD++ ++ D++ +N+
Sbjct: 227 LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQI-DQPDLISYNA 285

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +IS Y+ + +   A+ LFRE+   G   N+ T V  +      +   L   I   ++K G
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
             LQ  V+ AL  +Y R  ++  A  +  +   K   SWN+M++G+ QN L  +A+  F+
Sbjct: 346 IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           E+      P+ V   + +SA  +LG L  GK +H     +   S++ +   L+DMYAKC 
Sbjct: 406 EMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCG 464

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            +    ++F  M  ++ ++W  +I GY  +    +AL+LF  +   G+    +   S+L 
Sbjct: 465 SIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILY 524

Query: 371 ACSGLKCMSQTKEI-HGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVFESIESKDV- 427
           ACS    +S+  EI H      G   +    A +VD+ G+ G +    N  E IE   + 
Sbjct: 525 ACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT---NALEFIERMPLE 581

Query: 428 ---VSWTSMISS-YVHNG--LANEALELFYLMNEANV 458
                W +++ +  +H    +AN A +  + ++  NV
Sbjct: 582 PGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENV 618



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 157/339 (46%), Gaps = 12/339 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG       LFD++ Q  + ++NAM+  Y  N E    +  +  +   G  V++ T
Sbjct: 258 LYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I        L     I  L LK G      +  +L  +Y +  + + ARQLFD   
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK  +  WN++IS Y+ +G    A+ LF+EM    L  N  T  + L AC      ++G 
Sbjct: 378 EK-SLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGK 435

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H           VYV+ AL+ MYA+CG + EA  +   + +K+ V+WN+M+TG+  + 
Sbjct: 436 WVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHG 495

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-HAYAIKQGFVSDLQIG 299
              +A++ F E+  +G  P  V  ++ + A    G +  G E+ H+ A   GF       
Sbjct: 496 HGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF------- 548

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
             + + YA  C V+ +GR      A +FI    +  G A
Sbjct: 549 QPMSEHYA--CMVDILGRAGQLTNALEFIERMPLEPGPA 585



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+++A QLFD +  + V TWNAM+  Y  +G     L+ +  M   GI     T
Sbjct: 459 MYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVT 518

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC+    +  G +I H +    G+         +V +  +      A +  +RM
Sbjct: 519 FLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERM 578

Query: 120 GEKEDVVLWNSIISA 134
             +    +W +++ A
Sbjct: 579 PLEPGPAVWGALLGA 593


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 281/774 (36%), Positives = 447/774 (57%), Gaps = 17/774 (2%)

Query: 73  DLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK-EDVVLWN 129
           D+  G  + G +L+ G   ++   + NSL+ +Y+KC     AR +FD M     D+V W 
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS-FETLGMEIHAATVK 188
           ++ S  S +G   EAL LF E    GL+ NA+T  AA QAC  S  F   G  +     K
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181

Query: 189 SG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
            G     V V  ALI M+A+ G +     V   L  +  V W  ++T + Q+    +A++
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241

Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
            F ++   G +PDQ    + +SA   LG+   G++LH+ A++ G  SD  +   L+DMYA
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYA 301

Query: 308 KCC---CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH-LKALELFRTVQLEGLDADVM 363
           K      ++    VF +M   + ++WT +++GY Q      + + LF  +  EG+  + +
Sbjct: 302 KSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHI 361

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESI 422
              S+L AC+ L      ++IH + ++  L+DL V+ NA+V +Y + G+I+ +R+ F+ +
Sbjct: 362 TYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQL 421

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             K++VS++  +     +G +N   +  Y +    +   + T  S +SAA+S+ +L KG+
Sbjct: 422 YEKNMVSFSGNLDG---DGRSNTYQD--YQIERMELGISTFTFGSLISAAASVGMLTKGQ 476

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
            L+   ++ GF  + ++ +SLV MY+RCG L  A +VF+ +   ++I WTSMI+    HG
Sbjct: 477 RLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHG 536

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
               A++LF+ M A    P+ +T++A+L ACSH+GL+ EGK+   +M+  + L P  EHY
Sbjct: 537 YAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHY 596

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
           AC+VDLLGR+  +E+A  F+  M  +  A VW  LLGAC+ H+N ++GEI A  +++L+P
Sbjct: 597 ACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEP 656

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
            +P  YVL+SN++A +  W  V ++R  MR   L K  G SW+ + N IH F A D SH 
Sbjct: 657 QDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHP 716

Query: 723 ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE 782
           +++EIY KL  +  ++ +  GYV  T  VLH++ +E K   L  HSE++A+A+G++  T 
Sbjct: 717 QAEEIYTKLETLIREI-KVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTS 775

Query: 783 GS-LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +  IRI KNLRVCVDCHS  K VS+  GRE+++RD+NRFH  + G CSCG+YW
Sbjct: 776 ATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829



 Score =  222 bits (566), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 166/608 (27%), Positives = 306/608 (50%), Gaps = 32/608 (5%)

Query: 1   MYGKCGSVLDAEQLFD--KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           +Y KC +V  A  +FD   V  R + +W AM      NG     L  +      G+  +A
Sbjct: 93  LYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNA 152

Query: 59  FTFPCVIKAC--AMLKDLDCGAKIHGLVLKCGYDSTDFIVN-SLVAMYAKCYDFRKARQL 115
           FT     +AC  + L  L  GA + GLV K G+  TD  V  +L+ M+AK  D    R++
Sbjct: 153 FTLCAATQACFASELFHLAGGAVL-GLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRV 211

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD + E+  VV+W  +I+ Y+ SG   EA+ LF +M   G   + YT  + L AC +   
Sbjct: 212 FDGLFERT-VVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGS 270

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK---MTEAAGVLYQLENKDSVSWNSM 232
             LG ++H+  ++ G      V+  L+ MYA+      +  A  V  ++   + ++W ++
Sbjct: 271 FRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTAL 330

Query: 233 LTGFVQNDLY-CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           L+G+VQ      + M  F ++   G +P+ +   + + A   LG+  +G+++H + +K  
Sbjct: 331 LSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSN 390

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
                 +GN L+ MYA+   +      F Q+  ++ +S++  + G  ++N        ++
Sbjct: 391 LADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNT-------YQ 443

Query: 352 TVQLEGLDADV--MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
             Q+E ++  +     GS++ A + +  +++ + +H   ++ G  SD  I N++V +Y +
Sbjct: 444 DYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSR 503

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           CG +  +  VF+ +   +V+SWTSMIS    +G A  ALELF+ M  A V+ + +T ++ 
Sbjct: 504 CGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAV 563

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK 526
           LSA S   ++K+GKE +  +++K   L   +   + +VD+  R G ++ A    N +  +
Sbjct: 564 LSACSHAGLVKEGKE-HFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQ 622

Query: 527 -DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
            D ++W +++ A   H     G++A +   ++E +  AP     L+ LYA   +GL ++ 
Sbjct: 623 VDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAP--YVLLSNLYA--EAGLWDQV 678

Query: 583 KKFLEIMR 590
            +   +MR
Sbjct: 679 ARIRSLMR 686


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 282/858 (32%), Positives = 461/858 (53%), Gaps = 77/858 (8%)

Query: 42   VLETYSRMRVLGIS--VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYD-STDFIVNS 98
            V+++ SR     IS  VD F F      C ML  L        +++K     + D    +
Sbjct: 564  VVDSPSRASTGAISAGVDVFRFNTT---CGMLGAL--------VMIKLPQKWNPDAAAKN 612

Query: 99   LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE-ALGLFREMQRVGLV 157
            L++ Y    DF  A  +F  +G   + + WNS +  + +S   L   L +F+E+   G+V
Sbjct: 613  LISSYLGFGDFWSAAMVF-YVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 671

Query: 158  TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
             ++  +  AL+ C       LGMEIH   +K G +L VY+  AL+  Y RC  + +A  V
Sbjct: 672  FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 731

Query: 218  LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             +++ N +++ WN  +   +Q++   K ++ FR++Q +  K +    V  + A G++G L
Sbjct: 732  FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 791

Query: 278  LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
               K++H Y  + G  SD+ + N L+ MY+K   +    RVF  M  ++  SW ++I+ Y
Sbjct: 792  NAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSY 851

Query: 338  A-------------------------QNNCHL----------KALELFRTVQLEGLDADV 362
            A                           NC L          + L + + +Q EG   + 
Sbjct: 852  AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 911

Query: 363  MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFES 421
              + SVL A S L  ++  KE HGY++R G   D+ +  +++D+Y K  ++  ++ VF++
Sbjct: 912  SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDN 971

Query: 422  IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT----------------- 464
            ++++++ +W S++S Y   G+  +AL L   M +  ++ D +T                 
Sbjct: 972  MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKA 1031

Query: 465  -------LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
                   +   L A +SLS+L+KGKE++   IR GF  +  VA++L+DMY++  +L  A+
Sbjct: 1032 FMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAH 1091

Query: 518  KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            KVF  +Q K L  W  MI    + G GK AI +F +M+     PD ITF ALL AC +SG
Sbjct: 1092 KVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSG 1151

Query: 578  LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
            LI EG K+ + M  DY++ P  EHY C+VDLLGRA +L+EA+  + +M ++P A +W AL
Sbjct: 1152 LIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGAL 1211

Query: 638  LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
            LG+CR+H N    E  AK L +L+P N  NY+L+ N+++   +W+D++ +R  M  +G++
Sbjct: 1212 LGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVR 1271

Query: 698  KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
                 SWI+I  ++H F + +K H ++ +IY +L ++  ++++  GYV     V  N++E
Sbjct: 1272 NRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKL-GYVPDVNCVYQNMDE 1330

Query: 758  EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
             EK ++L  H+E+LAI YG++K   G  IR+ KN R+C DCHS  K +S +  REL +RD
Sbjct: 1331 VEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRD 1390

Query: 818  ANRFHHFEAGVCSCGDYW 835
              RFHHF  G CSC D+W
Sbjct: 1391 GVRFHHFREGKCSCNDFW 1408



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 164/621 (26%), Positives = 273/621 (43%), Gaps = 67/621 (10%)

Query: 6    GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLR-VLETYSRMRVLGISVDAFTFPCV 64
            G    A  +F     R    WN+ +  + S+   L  VLE +  +   G+  D+  +   
Sbjct: 621  GDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVA 680

Query: 65   IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
            +K C  + D+  G +IHG ++K G+D   ++  +L+  Y +C+   KA Q+F  M   E 
Sbjct: 681  LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPE- 739

Query: 125  VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
             +LWN  I     S +  + + LFR+MQ   L     T V  LQAC          +IH 
Sbjct: 740  ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHG 799

Query: 185  ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
               + G +  V + N LI+MY++ GK+  A  V   +EN+++ SWNSM++ +        
Sbjct: 800  YVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLND 859

Query: 245  AMQFFREL-----------------------------------QGAGQKPDQVCTVNAVS 269
            A   F EL                                   QG G KP+     + + 
Sbjct: 860  AWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQ 919

Query: 270  ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
            A   LG L  GKE H Y ++ GF  D+ +G +L+DMY K   +     VF  M  ++  +
Sbjct: 920  AISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFA 979

Query: 330  WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI------------------------I 365
            W ++++GY+       AL L   ++ EG+  D++                         I
Sbjct: 980  WNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASI 1039

Query: 366  GSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIES 424
              +L AC+ L  + + KEIH   IR G + D+ +  A++D+Y K  ++  +  VF  I++
Sbjct: 1040 TCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQN 1099

Query: 425  KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KE 483
            K + SW  MI  +   GL  EA+ +F  M +  V  D+IT  + LSA  +  ++ +G K 
Sbjct: 1100 KTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKY 1159

Query: 484  LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHG 542
             +  I              +VD+  R G LD A  + + +  K D  +W +++ +  +H 
Sbjct: 1160 FDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHK 1219

Query: 543  R---GKVAIDLFYKMEAESFA 560
                 + A    +K+E  + A
Sbjct: 1220 NLXFAETAAKNLFKLEPNNSA 1240



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/555 (24%), Positives = 248/555 (44%), Gaps = 77/555 (13%)

Query: 2    YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
            YG+C  +  A Q+F ++       WN  +   + + +  + +E + +M+   +  +  T 
Sbjct: 719  YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATI 778

Query: 62   PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              V++AC  +  L+   +IHG V + G DS   + N L++MY+K      AR++FD M E
Sbjct: 779  VRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM-E 837

Query: 122  KEDVVLWNSIISAYSASG------------------------QCL-----------EALG 146
              +   WNS+IS+Y+A G                         CL           E L 
Sbjct: 838  NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLN 897

Query: 147  LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
            + + MQ  G   N+ +  + LQA  +  F  +G E H   +++G +  VYV  +LI MY 
Sbjct: 898  ILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYV 957

Query: 207  RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV---- 262
            +   +  A  V   ++N++  +WNS+++G+    ++  A++   +++  G KPD V    
Sbjct: 958  KNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNG 1017

Query: 263  ---------CTVNA-----------VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
                     C   A           + A   L  L  GKE+H  +I+ GF+ D+ +   L
Sbjct: 1018 MISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATAL 1077

Query: 303  MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
            +DMY+K   +    +VF ++  +   SW  +I G+A      +A+ +F  +Q  G+  D 
Sbjct: 1078 IDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDA 1137

Query: 363  MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI------VDVYGKCGNIDYSR 416
            +   ++L AC     + +  +    +I    +D  I+  +      VD+ G+ G +D + 
Sbjct: 1138 ITFTALLSACKNSGLIGEGWKYFDSMI----TDYRIVPRLEHYCCMVDLLGRAGYLDEAW 1193

Query: 417  NVFESIESK-DVVSWTSMISS-YVHNGLA---NEALELFYLMNEANVESDSITLVSALSA 471
            ++  ++  K D   W +++ S  +H  L      A  LF L  E N  ++ I +++  S 
Sbjct: 1194 DLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKL--EPNNSANYILMMNLYSI 1251

Query: 472  ASSLSILKKGKELNG 486
             +    +   +EL G
Sbjct: 1252 FNRWEDMDHLRELMG 1266



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 31/261 (11%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MY K  S+  A+ +FD +  R +F WN+++  Y   G     L   ++M   GI  D  T
Sbjct: 955  MYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVT 1014

Query: 61   F------------------------PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV 96
            +                         C+++ACA L  L  G +IH L ++ G+    F+ 
Sbjct: 1015 WNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVA 1074

Query: 97   NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
             +L+ MY+K    + A ++F R+  K  +  WN +I  ++  G   EA+ +F EMQ+VG+
Sbjct: 1075 TALIDMYSKSSSLKNAHKVFRRIQNKT-LASWNCMIMGFAIFGLGKEAISVFNEMQKVGV 1133

Query: 157  VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ---NLQVYVANALIAMYARCGKMTE 213
              +A TF A L AC++S     G +   + +   +    L+ Y    ++ +  R G + E
Sbjct: 1134 GPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYC--CMVDLLGRAGYLDE 1191

Query: 214  AAGVLYQLENK-DSVSWNSML 233
            A  +++ +  K D+  W ++L
Sbjct: 1192 AWDLIHTMPLKPDATIWGALL 1212


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/801 (33%), Positives = 455/801 (56%), Gaps = 7/801 (0%)

Query: 35  SNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF 94
           +NG+    ++  + M+ L ++VD   F  +++ C   +  + G+K++ + L         
Sbjct: 71  ANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVE 130

Query: 95  IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV 154
           + N+ +AM+ +  +   A  +F +M E+ ++  WN ++  Y+  G   EA+ L+  M  V
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSER-NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWV 189

Query: 155 GLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
           G V  + YTF   L+ C        G E+H   V+ G  L + V NALI MY +CG +  
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +  ++  +D +SWN+M++G+ +N +  + ++ F  ++G    PD +   + +SA   
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           LG+   G+++HAY I  GF  D+ + N+L  MY          ++F +M  +D +SWTT+
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           I+GY  N    KA++ +R +  + +  D + + +VL AC+ L  +    E+H   I+  L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429

Query: 394 -SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
            S +++ N ++++Y KC  ID + ++F +I  K+V+SWTS+I+    N    EAL +F  
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLR 488

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
             +  ++ ++ITL +AL+A + +  L  GKE++  ++R G  L+  + ++L+DMY RCG 
Sbjct: 489 QMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGR 548

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           ++ A   FN  Q KD+  W  ++      G+G + ++LF +M      PD ITF++LL  
Sbjct: 549 MNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCG 607

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CS S ++ +G  +   M  DY + P  +HYAC+VDLLGRA  L+EA++F++ M + P   
Sbjct: 608 CSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA 666

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           VW ALL ACR+H   +LGE+ A+ + ELD  + G Y+L+ N++A   KW++V +VR  M+
Sbjct: 667 VWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMK 726

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
            +GL    G SW+E+  K+H+F++ DK H ++ EI   L    EK+  E G    ++   
Sbjct: 727 ENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMS-EVGLTKISESSS 785

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
            +  E  + ++  GHSER AIA+G++ +  G  I +TKNL +C +CH   K +S+   RE
Sbjct: 786 MDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRRE 845

Query: 813 LVVRDANRFHHFEAGVCSCGD 833
           + VRDA  FHHF+ G CSCGD
Sbjct: 846 ISVRDAEHFHHFKDGECSCGD 866



 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 187/578 (32%), Positives = 318/578 (55%), Gaps = 11/578 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
           M+ + G+++DA  +F K+S+R +F+WN ++G Y   G     +  Y RM  V G+  D +
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFPCV++ C  + DL  G ++H  V++ GY+    +VN+L+ MY KC D + AR LFDRM
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + D++ WN++IS Y  +G C E L LF  M+ + +  +  T  + + ACE      LG
Sbjct: 258 -PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IHA  + +G  + + V N+L  MY   G   EA  +  ++E KD VSW +M++G+  N
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L  KA+  +R +     KPD++     +SA   LG+L  G ELH  AIK   +S + + 
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L++MY+KC C++    +F+ +  ++ ISWT+IIAG   NN   +AL   R +++  L 
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQ 495

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            + + + + L AC+ +  +   KEIH +++R G+  D  + NA++D+Y +CG ++ + + 
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F S + KDV SW  +++ Y   G  +  +ELF  M ++ V  D IT +S L   S   ++
Sbjct: 556 FNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINA 537
           ++G      +   G        + +VD+  R G L  A+K    +  T D  +W +++NA
Sbjct: 615 RQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674

Query: 538 NGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
             +H +   G+++    ++++ +S    +   L  LYA
Sbjct: 675 CRIHHKIDLGELSAQHIFELDKKSVG--YYILLCNLYA 710


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 258/688 (37%), Positives = 401/688 (58%), Gaps = 42/688 (6%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +K  Q   +   + L+++Y+    + ++  +   +    +++W S++  +  + 
Sbjct: 27  QLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHG 85

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +++  F  +  +G  PD     + + +   L +L  G+ LH Y I+ G   DL  GN
Sbjct: 86  LPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGN 145

Query: 301 TLMDMYAKCCCVNYMGR--------------------------------VFYQMTAQDFI 328
            LM+MY+K   +   GR                                +F  M  +D +
Sbjct: 146 ALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLV 205

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           SW TIIAG A+N  + + L + R +    L  D   + SVL   +    +S+ KEIHG  
Sbjct: 206 SWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCS 265

Query: 389 IRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           IR+GL +D+ + ++++D+Y KC  +  S  VF  +  +D +SW S+I+  V NGL +E L
Sbjct: 266 IRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 325

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
             F  M  A ++  S +  S + A + L+ L  GK+L+G+I R GF+    +ASSLVDMY
Sbjct: 326 RFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 385

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           A+CG +  A ++F+ ++ +D++ WT+MI    LHG+   AI+LF +ME E          
Sbjct: 386 AKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK------- 438

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
           A+L ACSH GL++E  K+   M  D+ + P  EHYA + DLLGRA  LEEAY F+  M I
Sbjct: 439 AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHI 498

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
            PT  +W  LL ACRVH N ++ E VA ++LE+DP N G Y+L++N+++A+R+WK+  + 
Sbjct: 499 GPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKW 558

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           R  MR  G++KTP  SWIE+ NK+++F+A D+SH   ++I + +  + E +E+E GYV  
Sbjct: 559 RASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKE-GYVPD 617

Query: 748 TQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSR 807
           T  V H+VEEE+K  ++  HSERLAI +G++ +  G  IR+TKNLRVC DCH+  K +S+
Sbjct: 618 TSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISK 677

Query: 808 LFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + GRE+VVRD +RFHHF+ G CSCGDYW
Sbjct: 678 IVGREIVVRDNSRFHHFKNGTCSCGDYW 705



 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 210/404 (51%), Gaps = 38/404 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y     + D+ +LF+ +       W +++  Y S+G P + L ++  M   G+  D   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK-------AR 113
           FP V+K+CA+L DL+ G  +HG +++ G D   +  N+L+ MY+K     +       A 
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 114 QLFDRMGEK------------------------EDVVLWNSIISAYSASGQCLEALGLFR 149
           ++FD M E+                        +D+V WN+II+  + +G   E L + R
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EM    L  +++T  + L    ++   + G EIH  +++ G +  +YVA++LI MYA+C 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
           ++ ++  V   L  +D +SWNS++ G VQN L+ + ++FFR++  A  KP      + + 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A   L  L  GK+LH Y  + GF  ++ I ++L+DMYAKC  +    ++F +M  +D +S
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           WT +I G A +     A+ELF  ++ EG+ A       VL ACS
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKA-------VLTACS 445



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 137/312 (43%), Gaps = 38/312 (12%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           ++ ++L     +K  SQ +++H  +++   S L  L+ ++ +Y     +  S  +F +I 
Sbjct: 8   LVKALLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIH 67

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
               ++W S+I  Y  +GL +++L  F  M  + +  D     S L + + L  L  G+ 
Sbjct: 68  FPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGES 127

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYA-----------RCGA-------------------- 512
           L+G+IIR G + +    ++L++MY+           R GA                    
Sbjct: 128 LHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVL 187

Query: 513 -LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
             D   K+F  +  KDL+ W ++I  N  +G  +  + +  +M   +  PD  T  ++L 
Sbjct: 188 SEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLP 247

Query: 572 ACSHSGLINEGKKFLEIMRCDYQ--LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
             + +  I+ GK   EI  C  +  LD      + L+D+  +   + ++ + V ++  E 
Sbjct: 248 LIAENVDISRGK---EIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCR-VFTLLTER 303

Query: 630 TAEVWCALLGAC 641
               W +++  C
Sbjct: 304 DGISWNSIIAGC 315


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/657 (38%), Positives = 398/657 (60%), Gaps = 6/657 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG-FVQN 239
            +HA  + S       +++ L A YAR G +  A   L       S++  + +     + 
Sbjct: 29  RLHALLIVSSSASHTLISS-LAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRR 87

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A++ FR L  A  +PD      A+SA  RLG+L  G+ +   A   G+  D+ + 
Sbjct: 88  GSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVC 146

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           ++L+ +YA+   +    +VF +M  +D ++W+T++AG+      L A++++R ++ +G+ 
Sbjct: 147 SSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVK 206

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            D +++  V+ AC+  + +     +HG+++R G+  D+V   ++VD+Y K G +D +  V
Sbjct: 207 GDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRV 266

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  +  ++ VSW++MIS +  NG ++EAL LF  M  + ++ DS  LVSAL A S++  L
Sbjct: 267 FGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFL 326

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           K G+ ++GFI+R+ F+    + ++ +DMY++CG+L  A  +FN +  +DLILW +MI   
Sbjct: 327 KLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACC 385

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
           G HGRG+ A+ LF +M      PDH TF +LL A SHSGL+ EGK +   M   +++ P 
Sbjct: 386 GAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPA 445

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            +HY CLVDLL R+  +EEA   + SM+ EPT  +W ALL  C  +   ELGE +A  +L
Sbjct: 446 EKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNIL 505

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           EL P + G   L+SN++AA++KW  V QVR  M+ SG KK PG S IEI    H F+  D
Sbjct: 506 ELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMED 565

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           +SH + +EI  K+A++  ++ R+ GY+ +T+FV H++EEE K Q L  HSERLAIA+G+L
Sbjct: 566 QSHPQREEIVSKVAKLDLEM-RKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLL 624

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +  G+ + I KNLRVC DCH   K +S++  RE+VVRDA RFHHF+ GVCSC DYW
Sbjct: 625 NTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 255/503 (50%), Gaps = 11/503 (2%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           A++H L++     ++  +++SL A YA+  D   A            +  WN+II+A+S 
Sbjct: 28  ARLHALLI-VSSSASHTLISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSR 86

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
            G    AL +FR +       ++ TF  AL AC        G  +      +G    V+V
Sbjct: 87  RGSPASALRVFRALPPAAR-PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFV 145

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
            ++L+ +YAR G M +A  V  ++  +D V+W++M+ GFV       A+Q +R ++  G 
Sbjct: 146 CSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGV 205

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           K D+V  +  + A     N+  G  +H + ++ G   D+    +L+DMYAK   ++   R
Sbjct: 206 KGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACR 265

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF  M  ++ +SW+ +I+G+AQN    +AL LFR +Q  G+  D   + S L+ACS +  
Sbjct: 266 VFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGF 325

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
           +   + +HG+I+R+   + ++  A +D+Y KCG++  ++ +F  I  +D++ W +MI+  
Sbjct: 326 LKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACC 385

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             +G   +AL LF  MNE  +  D  T  S LSA S   ++++GK   G ++   F +  
Sbjct: 386 GAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNH-FKITP 444

Query: 498 SVAS--SLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGRGKVAIDLFYKM 554
           +      LVD+ AR G ++ A+ +   ++ +  + +W +++  +G     K+ +      
Sbjct: 445 AEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALL--SGCLNNKKLELGESIAD 502

Query: 555 EAESFAPDHITFLAL---LYACS 574
                 PD +  LAL   LYA +
Sbjct: 503 NILELQPDDVGVLALVSNLYAAT 525



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 213/428 (49%), Gaps = 21/428 (4%)

Query: 36  NGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI 95
            G P   L  + R        D+ TF   + ACA L DL  G  +       GY    F+
Sbjct: 87  RGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFV 145

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            +SL+ +YA+      A ++F RM  + D V W+++++ + ++GQ L+A+ ++R M+  G
Sbjct: 146 CSSLLHLYARWGAMGDAVKVFVRM-PRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG 204

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           +  +    +  +QAC  +    +G  +H   ++ G  + V  A +L+ MYA+ G +  A 
Sbjct: 205 VKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVAC 264

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            V   + +++ VSW++M++GF QN    +A++ FR +Q +G +PD    V+A+ A   +G
Sbjct: 265 RVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIG 324

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            L  G+ +H + +++ F  +  +G   +DMY+KC  +     +F  ++ +D I W  +IA
Sbjct: 325 FLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIA 383

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
               +     AL LF+ +   G+  D     S+L A S    + + K   G ++    + 
Sbjct: 384 CCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMV----NH 439

Query: 396 LVILNA------IVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISSYVHN-------G 441
             I  A      +VD+  + G ++ + ++  S++++  V+ W +++S  ++N        
Sbjct: 440 FKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGES 499

Query: 442 LANEALEL 449
           +A+  LEL
Sbjct: 500 IADNILEL 507



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 187/380 (49%), Gaps = 13/380 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G++ DA ++F ++ +R   TW+ M+  +VS G+PL  ++ Y RMR  G+  D   
Sbjct: 152 LYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVV 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI+AC   +++  GA +HG +L+ G         SLV MYAK      A ++F  M 
Sbjct: 212 MIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMV 271

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DV  W+++IS ++ +GQ  EAL LFR MQ  G+  ++   V+AL AC +  F  LG 
Sbjct: 272 HRNDVS-WSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGR 330

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   V+   +    +  A I MY++CG +  A  +   + ++D + WN+M+     + 
Sbjct: 331 SVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHG 389

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+  F+E+   G +PD     + +SA    G +  GK      +    ++  +   
Sbjct: 390 RGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHY 449

Query: 301 T-LMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAGYAQNNCHLKALELFRTV----- 353
             L+D+ A+   V     +   M A+  ++ W  +++G   N    K LEL  ++     
Sbjct: 450 VCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNN----KKLELGESIADNIL 505

Query: 354 QLEGLDADVMIIGSVLMACS 373
           +L+  D  V+ + S L A +
Sbjct: 506 ELQPDDVGVLALVSNLYAAT 525


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/760 (33%), Positives = 432/760 (56%), Gaps = 3/760 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G++  A+ LFD + +R V +WN+ML  Y+ NG   + +E +++MR+L I  D  TF
Sbjct: 114 YAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATF 173

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+KAC  ++D   G ++H L ++ G+DS      +LV MY+ C     A  +F  M E
Sbjct: 174 AVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPE 233

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           +  V  W+++I+ Y  + +  E L L++ M   G+  +  TF +A ++C   S   LG +
Sbjct: 234 RNSVC-WSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQ 292

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  +K+       V  A + MYA+C +M +A  V     N    S N+++ G+ + D 
Sbjct: 293 LHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQ 352

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ FR LQ +    D++    A++A   +   L G +LH  A+K G   ++ + NT
Sbjct: 353 VLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANT 412

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++DMYAKC  +     +F  M  +D +SW  IIA + QN    + L LF ++    ++ D
Sbjct: 413 ILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPD 472

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
               GSV+ AC+G K ++   E+HG +I+ G+  D  + +AI+D+Y KCG +  +  + E
Sbjct: 473 DYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHE 532

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +E +  VSW S+IS +        AL  F  M +  V  D+ T  + L   ++L+ ++ 
Sbjct: 533 RLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVEL 592

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++G I++   + +  +AS++VDMY++CG +  +  +F     +D + W++MI A   
Sbjct: 593 GKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAY 652

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG G+ AI LF +M+ ++  P+H  F+++L AC+H G +++G  +   MR  Y LDP  E
Sbjct: 653 HGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQME 712

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY+C+VDLLGR+  + EA + + SM  E    +W  LLG CR+  N E+ E  A  LL+L
Sbjct: 713 HYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQL 772

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP +   YVL+SNV+A +  W +V ++R  M+   LKK PG SWI++ +++H+F+  DK+
Sbjct: 773 DPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKA 832

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEK 760
           H  S+EIY++   + ++++ + GYV +    L + E +E+
Sbjct: 833 HPRSEEIYQQTHLLVDEMKWD-GYVPEIDGFLLDEEVDEQ 871



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 177/651 (27%), Positives = 322/651 (49%), Gaps = 46/651 (7%)

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            TF  + + C+ LK ++ G + H  +   G+  T F+ N L+  Y KC +   A  +FD+
Sbjct: 39  LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98

Query: 119 MGEKE------------------------------DVVLWNSIISAYSASGQCLEALGLF 148
           M +++                              DVV WNS++S Y  +G   +++ +F
Sbjct: 99  MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            +M+ + +  +  TF   L+AC       LG+++H   ++ G +  V    AL+ MY+ C
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
            K+  A  +  ++  ++SV W++++ G+V+ND + + ++ ++ +   G    Q    +A 
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            +   L     G +LHAYA+K  F  D  +G   +DMYAKC  +    +VF         
Sbjct: 279 RSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQ 338

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           S   +I GYA+ +  L+ALE+FR++Q   LD D + +   L ACS +K   +  ++HG  
Sbjct: 339 SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLA 398

Query: 389 IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           ++ GL  ++ + N I+D+Y KCG +  +  +F+ +E KD VSW ++I+++  N    E L
Sbjct: 399 VKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETL 458

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
            LF  M  + +E D  T  S + A +    L  G E++G +I+ G  L+  V S+++DMY
Sbjct: 459 ALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMY 518

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
            +CG L  A K+   ++ +  + W S+I+      +G+ A+  F +M      PD+ T+ 
Sbjct: 519 CKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYA 578

Query: 568 ALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM- 625
            +L  C++   +  GK+   +I++     D +    + +VD+  +  +++++    R M 
Sbjct: 579 TVLDICANLATVELGKQIHGQILKLQLHSDVYIA--STIVDMYSKCGNMQDS----RIMF 632

Query: 626 QIEPTAE--VWCALLGACRVHSNKELGEIVAKKLLELDPGN--PGNYVLIS 672
           +  P  +   W A++ A   H    LGE   K   E+   N  P + + IS
Sbjct: 633 EKAPKRDYVTWSAMICAYAYHG---LGEDAIKLFEEMQLQNVKPNHTIFIS 680



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 162/552 (29%), Positives = 279/552 (50%), Gaps = 8/552 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C  +  A  +F ++ +R    W+A++  YV N      L+ Y  M   G+ V   T
Sbjct: 214 MYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQAT 273

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F    ++CA L   + G ++H   LK  +   + +  + + MYAKC     AR++F+   
Sbjct: 274 FASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
                   N++I  Y+   Q LEAL +FR +Q+  L  +  +   AL AC        G+
Sbjct: 334 NPTRQS-HNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGI 392

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   VK G +  + VAN ++ MYA+CG + EA  +   +E KD+VSWN+++    QN+
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNE 452

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              + +  F  +  +  +PD     + V A      L  G E+H   IK G   D  +G+
Sbjct: 453 HVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGS 512

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++DMY KC  +    ++  ++  +  +SW +II+G++       AL  F  +   G+  
Sbjct: 513 AIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIP 572

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     +VL  C+ L  +   K+IHG I++  L SD+ I + IVD+Y KCGN+  SR +F
Sbjct: 573 DNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMF 632

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E    +D V+W++MI +Y ++GL  +A++LF  M   NV+ +    +S L A + +  + 
Sbjct: 633 EKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVD 692

Query: 480 KGKELNGFI-IRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           KG  L+ F  +R  + L+  +   S +VD+  R G ++ A ++   +  + D ++W +++
Sbjct: 693 KG--LHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLL 750

Query: 536 NANGLHGRGKVA 547
               L G  +VA
Sbjct: 751 GICRLQGNVEVA 762



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 222/457 (48%), Gaps = 32/457 (7%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           T   TF    Q C +      G + HA    +G    V+V+N L+  Y +C  +  A  V
Sbjct: 36  TKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNV 95

Query: 218 LYQLENKDSVSWNSMLTG-------------------------------FVQNDLYCKAM 246
             ++  +D +SWN+M+ G                               ++QN  + K++
Sbjct: 96  FDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSI 155

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
           + F +++    + D       + A   + +   G ++H  AI+ GF SD+  G  L+DMY
Sbjct: 156 EIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMY 215

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
           + C  +++   +F +M  ++ + W+ +IAGY +N+   + L+L++ +  EG+        
Sbjct: 216 STCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFA 275

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           S   +C+GL       ++H Y ++     D ++  A +D+Y KC  +  +R VF +  + 
Sbjct: 276 SAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNP 335

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
              S  ++I  Y       EALE+F  + ++ ++ D I+L  AL+A S++    +G +L+
Sbjct: 336 TRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLH 395

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
           G  ++ G +    VA++++DMYA+CGAL  A  +F+ ++ KD + W ++I A+  +   +
Sbjct: 396 GLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVE 455

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
             + LF  M   +  PD  TF +++ AC+    +N G
Sbjct: 456 ETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYG 492



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 195/381 (51%), Gaps = 10/381 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++++A  +FD +  +   +WNA++ A+  N      L  +  M    +  D +T
Sbjct: 416 MYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYT 475

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+KACA  K L+ G ++HG V+K G     F+ ++++ MY KC    +A ++ +R+ 
Sbjct: 476 FGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERL- 534

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+   V WNSIIS +S+  Q   AL  F  M +VG++ + +T+   L  C + +   LG 
Sbjct: 535 EERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGK 594

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K   +  VY+A+ ++ MY++CG M ++  +  +   +D V+W++M+  +  + 
Sbjct: 595 QIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHG 654

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG----KELHAYAIKQGFVSDL 296
           L   A++ F E+Q    KP+    ++ + A   +G +  G    +E+ ++    G    +
Sbjct: 655 LGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSH---YGLDPQM 711

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIA-GYAQNNCHLKALELFRTVQ 354
           +  + ++D+  +   VN    +   M  + D + W T++     Q N  +        +Q
Sbjct: 712 EHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQ 771

Query: 355 LEGLDADVMIIGSVLMACSGL 375
           L+  D+   ++ S + A +G+
Sbjct: 772 LDPQDSSAYVLLSNVYAIAGM 792



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 219/490 (44%), Gaps = 42/490 (8%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA- 338
           GK+ HA     GFV  + + N L+  Y KC  +NY   VF +M  +D ISW T+I GYA 
Sbjct: 57  GKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAG 116

Query: 339 ------------------------------QNNCHLKALELFRTVQLEGLDADVMIIGSV 368
                                         QN  H K++E+F  ++L  +  D      V
Sbjct: 117 VGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVV 176

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           L AC+G++      ++H   I+ G  SD+V   A+VD+Y  C  +D++ N+F  +  ++ 
Sbjct: 177 LKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNS 236

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           V W+++I+ YV N    E L+L+ +M +  +     T  SA  + + LS  + G +L+ +
Sbjct: 237 VCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAY 296

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
            ++  F  +  V ++ +DMYA+C  +  A KVFN           ++I       +   A
Sbjct: 297 ALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEA 356

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLV 606
           +++F  ++      D I+    L ACS      EG +   + ++C    +    +   ++
Sbjct: 357 LEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVAN--TIL 414

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG-NP 665
           D+  +   L EA      M+I+  A  W A++ A     N+ + E +A  +  L     P
Sbjct: 415 DMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAAHE--QNEHVEETLALFVSMLRSTMEP 471

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
            +Y   S V A +   K      M + G  +K   G  W  +G+ I     +     E++
Sbjct: 472 DDYTFGSVVKACAG--KKALNYGMEVHGRVIKSGMGLDWF-VGSAIIDMYCKCGMLVEAE 528

Query: 726 EIYKKLAEIT 735
           +I+++L E T
Sbjct: 529 KIHERLEERT 538


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 283/804 (35%), Positives = 442/804 (54%), Gaps = 37/804 (4%)

Query: 66  KACAMLKDLDCGAKIHGLVL-KCGYDSTDFIVNSLVAMYAKCYDFRKARQLF-DRMGEKE 123
           K    LK L C     GL+  K   +    I +S+     +  D+  AR  F D  G   
Sbjct: 36  KTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDY--ARNAFGDDDGNMA 93

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            + ++N +I  Y+++G   +A+ L+ +M  +G+V + YTF   L AC      + G+++H
Sbjct: 94  SLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVH 153

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
            A +K G    ++V+N+LI  YA CGK+     +   +  ++ VSW S++ G+   DL  
Sbjct: 154 GAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSK 213

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+  F ++  AG +P+ V  V  +SA  +L +L  GK++ +Y  + G      + N L+
Sbjct: 214 EAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALV 273

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMY KC  +    ++F +   ++ + + TI++ Y  +      L +   +  +G   D +
Sbjct: 274 DMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKV 333

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESI 422
            + S + AC+ L  +S  K  H Y++R GL     I NAI+D+Y KCG  + +  VFE +
Sbjct: 334 TMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHM 393

Query: 423 ESKDVVSWTSMISSYVHNG-------------------------------LANEALELFY 451
            +K VV+W S+I+  V +G                               +  EA+ELF 
Sbjct: 394 PNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFR 453

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
            M    +  D +T+V   SA   L  L   K +  +I +   +++  + ++LVDM++RCG
Sbjct: 454 EMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCG 513

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
               A  VF  ++ +D+  WT+ I    + G  + AI+LF +M  +   PD + F+ALL 
Sbjct: 514 DPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLT 573

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           ACSH G +++G++    M   + + P   HY C+VDLLGRA  LEEA   ++SM IEP  
Sbjct: 574 ACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPND 633

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
            VW +LL ACR H N EL    A+KL +L P   G +VL+SN++A++ KW DV +VR++M
Sbjct: 634 VVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQM 693

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           +  G++K PGSS IE+   IH F + D+SH+E+  I   L EI  +L  E GYV  T  V
Sbjct: 694 KEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLS-EAGYVPDTTNV 752

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           L +V+E+EK  +L  HSE+LA+AYG++ + +G  IR+ KNLR+C DCHSF KLVS+L+ R
Sbjct: 753 LLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNR 812

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E+ VRD NR+H F+ G CSC DYW
Sbjct: 813 EITVRDNNRYHFFKEGFCSCRDYW 836



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 173/616 (28%), Positives = 301/616 (48%), Gaps = 46/616 (7%)

Query: 16  DKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLD 75
           D  +  ++F +N ++  Y S G   + +  Y +M V+GI  D +TFP ++ AC+ +  L 
Sbjct: 88  DDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALS 147

Query: 76  CGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
            G ++HG VLK G +   F+ NSL+  YA+C      R+LFD M E+ +VV W S+I+ Y
Sbjct: 148 EGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLER-NVVSWTSLINGY 206

Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
           S      EA+ LF +M   G+  N  T V  + AC       LG ++ +   + G  L  
Sbjct: 207 SGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELST 266

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
            + NAL+ MY +CG +  A  +  +  NK+ V +N++++ +V ++     +    E+   
Sbjct: 267 IMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQK 326

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC------ 309
           G +PD+V  ++ ++A  +LG+L  GK  HAY ++ G      I N ++DMY KC      
Sbjct: 327 GPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAA 386

Query: 310 CCV-NYMG------------------------RVFYQMTAQDFISWTTIIAGYAQNNCHL 344
           C V  +M                         R+F +M  +D +SW T+I    Q +   
Sbjct: 387 CKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFE 446

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIV 403
           +A+ELFR +Q +G+  D + +  +  AC  L  +   K +  YI +  +  DL +  A+V
Sbjct: 447 EAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALV 506

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D++ +CG+   + +VF+ +E +DV +WT+ I      G    A+ELF  M E  V+ D +
Sbjct: 507 DMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDV 566

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFN 521
             V+ L+A S    + +G++L  + + K   +   +     +VD+  R G L+ A  +  
Sbjct: 567 VFVALLTACSHGGSVDQGRQLF-WSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQ 625

Query: 522 CVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEA-ESFAPDHITFLALLYACSHSGLI 579
            +  + + ++W S++ A   H   ++A    Y  E     AP+ +    LL     S + 
Sbjct: 626 SMPIEPNDVVWGSLLAACRKHKNVELA---HYAAEKLTQLAPERVGIHVLL-----SNIY 677

Query: 580 NEGKKFLEIMRCDYQL 595
               K+ ++ R   Q+
Sbjct: 678 ASAGKWTDVARVRLQM 693



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 229/475 (48%), Gaps = 47/475 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y +CG V    +LFD + +R V +W +++  Y         +  + +M   G+  +  T 
Sbjct: 175 YAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTM 234

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
            CVI ACA LKDL+ G K+   + + G + +  +VN+LV MY KC D   ARQ+FD    
Sbjct: 235 VCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECAN 294

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K ++V++N+I+S Y       + L +  EM + G   +  T ++ + AC      ++G  
Sbjct: 295 K-NLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKS 353

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK----------------- 224
            HA  +++G      ++NA+I MY +CGK   A  V   + NK                 
Sbjct: 354 SHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGD 413

Query: 225 --------------DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
                         D VSWN+M+   VQ  ++ +A++ FRE+Q  G   D+V  V   SA
Sbjct: 414 MELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASA 473

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
            G LG L   K +  Y  K     DLQ+G  L+DM+++C   +    VF +M  +D  +W
Sbjct: 474 CGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAW 533

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI------ 384
           T  I   A       A+ELF  +  + +  D ++  ++L ACS    + Q +++      
Sbjct: 534 TAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEK 593

Query: 385 -HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES--IESKDVVSWTSMISS 436
            HG  IR     +V    +VD+ G+ G ++ + ++ +S  IE  DVV W S++++
Sbjct: 594 AHG--IR---PHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVV-WGSLLAA 642



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 136/314 (43%), Gaps = 32/314 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A Q+FD+ + + +  +N ++  YV +     VL     M   G   D  T
Sbjct: 275 MYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVT 334

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC-------------- 106
               I ACA L DL  G   H  VL+ G +  D I N+++ MY KC              
Sbjct: 335 MLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMP 394

Query: 107 -----------------YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                             D   A ++FD M E+ D+V WN++I A        EA+ LFR
Sbjct: 395 NKTVVTWNSLIAGLVRDGDMELAWRIFDEMLER-DLVSWNTMIGALVQVSMFEEAIELFR 453

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EMQ  G+  +  T V    AC       L   +     K+  ++ + +  AL+ M++RCG
Sbjct: 454 EMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCG 513

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
             + A  V  ++E +D  +W + +           A++ F E+     KPD V  V  ++
Sbjct: 514 DPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLT 573

Query: 270 ASGRLGNLLNGKEL 283
           A    G++  G++L
Sbjct: 574 ACSHGGSVDQGRQL 587


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/717 (35%), Positives = 407/717 (56%), Gaps = 38/717 (5%)

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEA 214
           L+  A T    L+  E S+     +   A    S   N+  ++   LI +    G    A
Sbjct: 58  LIVFAKTSFPVLKRFELSNGAEFLLSTEAMVPPSLPTNIPSHLGLRLIRVALNVGDFNRA 117

Query: 215 AGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
             +   +   D  + +++++    + L  +A++ +  LQ  G KPD    + A  A    
Sbjct: 118 RQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVS 177

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G+ L  KE+H  A + G +SD+ +GN L+  Y KC CV    RVF  +  +D +SWT++ 
Sbjct: 178 GDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLS 237

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           + Y +     K +++FR +   G+  + M + S+L AC+ LK +   KEIHG+ +R G+ 
Sbjct: 238 SCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMV 297

Query: 395 -DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY---------------- 437
            +L + +A+V +Y KC ++  +R VF+ +  +DVVSW  ++++Y                
Sbjct: 298 VNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKM 357

Query: 438 -------------------VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
                              + NG + EA+E+F  M +   + + IT+ S L A S    L
Sbjct: 358 SRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENL 417

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + GKE++ ++ R     + +  ++L+ MYA+CG L+++  VF+ ++ KD++ W +MI AN
Sbjct: 418 RMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIAN 477

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
            +HG GK A+ LF KM      P+ +TF  +L  CSHS L+ EG +    M  D+ ++P 
Sbjct: 478 AMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPD 537

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
             HY+C+VD+  RA  L EAY+F++ M +EPTA  W ALL ACRV+ N EL +I AKKL 
Sbjct: 538 ANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLF 597

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           E++P NPGNYV + N+   ++ W +  QVR+ M+  G+ KTPG SW+++GNK+H+F+  D
Sbjct: 598 EIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGD 657

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           KS+ ESD+IY  L E+ EK+ +  GY   T +VL ++++EEK + L  HSE+LA+A+G+L
Sbjct: 658 KSNIESDKIYNFLDELVEKM-KMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGIL 716

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                S IR+ KNLR+C DCH+  K +S++ G  +VVRD+ RFHHF+ G CSC D W
Sbjct: 717 NLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 225/448 (50%), Gaps = 38/448 (8%)

Query: 108 DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
           DF +ARQLFD + +  D    +++ISA +  G   EA+ ++  +Q  G+  +   F+AA 
Sbjct: 113 DFNRARQLFDNIPQ-PDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 171

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           +AC  S       E+H    + G    V+V NALI  Y +C  +  A  V   L  +D V
Sbjct: 172 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 231

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           SW S+ + +V+     K M  FRE+  +G KP+ +   + + A   L +L +GKE+H +A
Sbjct: 232 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFA 291

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-- 345
           ++ G V +L + + L+ +YAKC  V     VF  M  +D +SW  ++  Y +N  + K  
Sbjct: 292 VRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGF 351

Query: 346 ---------------------------------ALELFRTVQLEGLDADVMIIGSVLMAC 372
                                            A+E+FR +Q  G   + + I S+L AC
Sbjct: 352 SLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPAC 411

Query: 373 SGLKCMSQTKEIHGYIIRK-GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           S  + +   KEIH Y+ R   + DL    A++ +Y KCG+++ SRNVF+ +  KDVV+W 
Sbjct: 412 SFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWN 471

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           +MI +   +G   EAL LF  M  + V+ +S+T    LS  S   ++++G ++   + R 
Sbjct: 472 TMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRD 531

Query: 492 GF-NLEGSVASSLVDMYARCGALDIANK 518
                + +  S +VD+Y+R G L+ A K
Sbjct: 532 HLVEPDANHYSCVVDIYSRAGRLNEAYK 559



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 241/520 (46%), Gaps = 51/520 (9%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A QLFD + Q    T + ++ A  ++G     ++ YS ++  GI  D   F    KACA+
Sbjct: 117 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 176

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
             D     ++H    +CG  S  F+ N+L+  Y KC     AR++FD +  + DVV W S
Sbjct: 177 SGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVR-DVVSWTS 235

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           + S Y   G   + + +FREM   G+  N  T  + L AC +      G EIH   V+ G
Sbjct: 236 LSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHG 295

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK------ 244
             + ++V +AL+++YA+C  + EA  V   + ++D VSWN +LT + +N  Y K      
Sbjct: 296 MVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFL 355

Query: 245 -----------------------------AMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
                                        A++ FR++Q  G KP+++   + + A     
Sbjct: 356 KMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSE 415

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           NL  GKE+H Y  +   V DL     L+ MYAKC  +N    VF  M  +D ++W T+I 
Sbjct: 416 NLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMII 475

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-- 393
             A +    +AL LF  + L  +  + +    VL  CS  + + +  +I   + R  L  
Sbjct: 476 ANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVE 535

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS---YVHNGLAN-EALE 448
            D    + +VD+Y + G ++ +    + +  +   S W +++++   Y +  LA   A +
Sbjct: 536 PDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKK 595

Query: 449 LFYLMNEANVESDSITLVSAL------SAASSLSILKKGK 482
           LF +  E N   + ++L + L      S AS + IL K +
Sbjct: 596 LFEI--EPNNPGNYVSLFNILVTAKMWSEASQVRILMKER 633



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 177/401 (44%), Gaps = 58/401 (14%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YGKC  V  A ++FD +  R V +W ++   YV  G P + ++ +  M   G+  +  T 
Sbjct: 209 YGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTV 268

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ ACA LKDL  G +IHG  ++ G     F+ ++LV++YAKC   R+AR +FD M  
Sbjct: 269 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 328

Query: 122 KEDVVLWNSIISAY-----------------------------SASGQCL------EALG 146
           + DVV WN +++AY                             +  G C+      EA+ 
Sbjct: 329 R-DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVE 387

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           +FR+MQ++G   N  T  + L AC  S    +G EIH    +  +   +    AL+ MYA
Sbjct: 388 MFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYA 447

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +CG +  +  V   +  KD V+WN+M+     +    +A+  F ++  +  +P+ V    
Sbjct: 448 KCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTG 507

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL-------MDMYAKCCCVNYMGRVF 319
            +S              H+  +++G    +QI N++        D     C V+   R  
Sbjct: 508 VLSGCS-----------HSRLVEEG----VQIFNSMGRDHLVEPDANHYSCVVDIYSRAG 552

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
               A  FI    +    +     L A  +++ V+L  + A
Sbjct: 553 RLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISA 593



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 42/274 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAY--------------------------- 33
           +Y KC SV +A  +FD +  R V +WN +L AY                           
Sbjct: 309 LYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEAT 368

Query: 34  --------VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
                   + NG     +E + +M+ +G   +  T   ++ AC+  ++L  G +IH  V 
Sbjct: 369 WNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVF 428

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
           +           +L+ MYAKC D   +R +FD M  ++DVV WN++I A +  G   EAL
Sbjct: 429 RHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM-RRKDVVAWNTMIIANAMHGNGKEAL 487

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN---ALI 202
            LF +M    +  N+ TF   L  C  S     G++I  +  +   +L    AN    ++
Sbjct: 488 FLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGR--DHLVEPDANHYSCVV 545

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
            +Y+R G++ EA   +  +  + + S W ++L  
Sbjct: 546 DIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 579


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 251/652 (38%), Positives = 399/652 (61%), Gaps = 10/652 (1%)

Query: 187 VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS--VSWNSMLTGFVQNDLYCK 244
           V S QNL      +L A YAR G +  A   L    +  S   +WN++L    +      
Sbjct: 40  VSSSQNL----FPSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGA 95

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A++ FR L  +  +PD      A++A  RLG+L   + +   A   G+  D+ + + L+ 
Sbjct: 96  ALRVFRALPSSA-RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLH 154

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +Y++C  +    RVF  M  +D ++W+T++AG+      ++AL ++  ++  G+  D ++
Sbjct: 155 VYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVV 214

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           +  V+ AC+          +HG  +R G+  D+VI  ++VD+Y K G+ D +R VF  + 
Sbjct: 215 MVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMP 274

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            ++ VSW ++IS +  NG A+EAL+LF  M+ + ++ DS  LVSAL A + +  LK GK 
Sbjct: 275 YRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKS 334

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++GFI+R+    +  + ++++DMY++CG+L+ A K+FN + ++DL+LW +MI   G HG 
Sbjct: 335 IHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGC 393

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
           G  A+ LF ++      PDH TF +LL A SHSGL+ EGK + + M  ++ ++P  +H  
Sbjct: 394 GHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCV 453

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C+VDLL R+  +EEA + + SM  EPT  +W ALL  C  +   ELGE +AKK+LE  P 
Sbjct: 454 CVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPE 513

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           + G   L+SN++AA++KW  V ++R  M+ SG KK PG S IE+    H+F+  D+SH +
Sbjct: 514 DIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQ 573

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
             EI K +++++ ++ R+ GYV +T+FV H+++E+ K Q+L  HSERLAIA+G+L ++ G
Sbjct: 574 HQEILKMISKLSFEM-RKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPG 632

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + + I KNLRVC DCH   K +S++  RE+VVRDA RFHHF+ G CSCGDYW
Sbjct: 633 TRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 241/488 (49%), Gaps = 29/488 (5%)

Query: 2   YGKCGSVLDAEQLF--DKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV--D 57
           Y + G++  AE        S+  +  WNA+L A    G P   L  +   R L  S   D
Sbjct: 54  YARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVF---RALPSSARPD 110

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           + TF   + ACA L DLD    +       GY    F+ ++L+ +Y++C     A ++FD
Sbjct: 111 STTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFD 170

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            M  K D V W+++++ + ++G+ +EALG++  M+  G+  +    V  +QAC  +    
Sbjct: 171 GMPRK-DHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTR 229

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           +G  +H   ++ G  + V +A +L+ MYA+ G    A  V   +  +++VSWN++++GF 
Sbjct: 230 MGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFA 289

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN    +A+  FRE+  +G +PD    V+A+ A   +G L  GK +H + +++       
Sbjct: 290 QNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR-LEFQCI 348

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +G  ++DMY+KC  +    ++F +++++D + W  +IA    + C   AL LF+ +   G
Sbjct: 349 LGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETG 408

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA------IVDVYGKCGN 411
           +  D     S+L A S    + + K    +   + +++  I         +VD+  + G 
Sbjct: 409 IKPDHATFASLLSALSHSGLVEEGK----FWFDRMITEFGIEPTEKHCVCVVDLLARSGL 464

Query: 412 IDYSRNVFESIESKDVVS-WTSMISSYVHNGLANEALELFYLMNEANVESDS-----ITL 465
           ++ +  +  S+ ++  +  W +++S      L N+ LEL   + +  +ES       + L
Sbjct: 465 VEEANEMLASMHTEPTIPIWVALLSGC----LNNKKLELGETIAKKILESQPEDIGVLAL 520

Query: 466 VSALSAAS 473
           VS L AA+
Sbjct: 521 VSNLYAAA 528



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 201/412 (48%), Gaps = 12/412 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y +CG++ DA ++FD + ++    W+ M+  +VS G P+  L  YSRMR  G++ D   
Sbjct: 155 VYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVV 214

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI+AC +  +   GA +HG  L+ G      I  SLV MYAK   F  ARQ+F RM 
Sbjct: 215 MVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVF-RMM 273

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              + V WN++IS ++ +G   EAL LFREM   GL  ++   V+AL AC D  F  LG 
Sbjct: 274 PYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGK 333

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   ++  +  Q  +  A++ MY++CG +  A  +  +L ++D V WN+M+     + 
Sbjct: 334 SIHGFILRRLE-FQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHG 392

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIG 299
               A+  F+EL   G KPD     + +SA    G +  GK      I + G     +  
Sbjct: 393 CGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHC 452

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAGYAQNNCHLKALELFRTVQ---L 355
             ++D+ A+   V     +   M  +  I  W  +++G   N    K LEL  T+    L
Sbjct: 453 VCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNN----KKLELGETIAKKIL 508

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYG 407
           E    D+ ++  V    +  K   + +EI   +   G S  V   ++++V+G
Sbjct: 509 ESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSG-SKKVPGYSLIEVHG 559


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 259/704 (36%), Positives = 411/704 (58%), Gaps = 68/704 (9%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N +++ YA+ GK+ +A  V   +  +DSVSW +++ G+ Q   +  A++ F ++      
Sbjct: 45  NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC--------- 309
           P Q    N +++    G+   GK++H++ +K G  + + + N+L++MYAK          
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164

Query: 310 ---------CCVNYM-------GRV------FYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
                       N M       GRV      F  ++ +D +SW ++IAG  Q+    +AL
Sbjct: 165 FDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEAL 224

Query: 348 ELFRTV-QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR---------------- 390
           + F ++ +   L  D   + S L AC+ L+ +S  K+IHGYI+R                
Sbjct: 225 QFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISM 284

Query: 391 ----------------KGLSDL--VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
                            G+SDL  +   A+++ Y K G+I  +R +F S++  DVV+WT+
Sbjct: 285 YAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTA 344

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MI  YV NGL N+A+E+F  M       +S TL + LSA+SS++ L  GK+++   IR G
Sbjct: 345 MIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSG 404

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKDLILWTSMINANGLHGRGKVAIDLF 551
             L  SV ++L  MYA+ G+++ A KVFN + Q +D + WTSMI A   HG G+ AI+LF
Sbjct: 405 EALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELF 464

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
            +M      PDHIT++ +L AC+H GL+ +G+ + ++M+  +++DP   HYAC+VDL GR
Sbjct: 465 EQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGR 524

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
           A  L+EAY+FV +M +EP    W +LL +C+V+ N +L ++ A++LL ++P N G Y  +
Sbjct: 525 AGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSAL 584

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           +NV+++  KW D  ++R  M+  G+KK  G SW++I NK H F   D  H + DEIYK +
Sbjct: 585 ANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMM 644

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKN 791
            +I +++++  G+   T+ VLH++E E K Q+L  HSE+LAIA+G++ + E + +RI KN
Sbjct: 645 DKIWKEIKKM-GFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKN 703

Query: 792 LRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           LRVC DCH+  K +S+L  RE++VRDA RFHHF+ G CSC DYW
Sbjct: 704 LRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 250/516 (48%), Gaps = 72/516 (13%)

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
           T F  N++++ YAK     KA Q+FD +  + D V W +II  Y+  G+  +A+ +F +M
Sbjct: 40  TTFSWNTILSGYAKQGKLEKAHQVFDLIPVR-DSVSWTTIIVGYNQMGRFEDAIKIFVDM 98

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR---- 207
            +  ++   +T    L +C  +    +G ++H+  VK G +  V VAN+L+ MYA+    
Sbjct: 99  VKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDL 158

Query: 208 ---------------------------CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                                      CG++  A      L  +D VSWNSM+ G  Q+ 
Sbjct: 159 KMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHG 218

Query: 241 LYCKAMQFFRE-LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +A+QFF   L+    KPD+    +A+SA   L  L  GK++H Y ++  F +   +G
Sbjct: 219 FDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVG 278

Query: 300 NTLMDMYAKCCCVNYMGR---------------------------------VFYQMTAQD 326
           N L+ MYAK   V    R                                 +F  +   D
Sbjct: 279 NALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPD 338

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            ++WT +I GY QN  +  A+E+F+T+  EG   +   + ++L A S +  ++  K+IH 
Sbjct: 339 VVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHA 398

Query: 387 YIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLAN 444
             IR G +    + NA+  +Y K G+I+ +R VF  + +++D VSWTSMI +   +GL  
Sbjct: 399 SAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGE 458

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SS 502
           EA+ELF  M    ++ D IT V  LSA +   ++++G+     +++    ++ +++  + 
Sbjct: 459 EAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFD-LMKNVHKIDPTLSHYAC 517

Query: 503 LVDMYARCGALDIANK-VFNCVQTKDLILWTSMINA 537
           +VD++ R G L  A K V N     D+I W S++++
Sbjct: 518 MVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSS 553



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 249/570 (43%), Gaps = 124/570 (21%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLR-------V 42
           +Y K G  LDA  LF+++  +T F+WN +L  Y   G+           P+R       +
Sbjct: 19  LYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTI 78

Query: 43  LETYSRM----RVLGISVD---------AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
           +  Y++M      + I VD          FT   V+ +CA       G K+H  V+K G 
Sbjct: 79  IVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGL 138

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMG----------------------------- 120
            +   + NSL+ MYAK  D + A+ +FDRM                              
Sbjct: 139 HACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFEL 198

Query: 121 -EKEDVVLWNSIISAYSASGQCLEALGLFRE-MQRVGLVTNAYTFVAALQACEDSSFETL 178
             + D+V WNS+I+  +  G   EAL  F   ++   L  + ++  +AL AC +    + 
Sbjct: 199 LSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSF 258

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCG----------------------------- 209
           G +IH   V++  +    V NALI+MYA+ G                             
Sbjct: 259 GKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGY 318

Query: 210 ----KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
                +T A  +   L++ D V+W +M+ G+VQN L   A++ F+ +   G +P+     
Sbjct: 319 VKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLA 378

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA- 324
             +SAS  + +L +GK++HA AI+ G      +GN L  MYAK   +N   +VF  +   
Sbjct: 379 AMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQN 438

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D +SWT++I   AQ+    +A+ELF  +   G+  D +    VL AC+           
Sbjct: 439 RDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACT----------- 487

Query: 385 HGYIIRKGLSDLVILNAI-------------VDVYGKCGNIDYSRNVFESIE-SKDVVSW 430
           HG ++ +G S   ++  +             VD++G+ G +  +    E++    DV++W
Sbjct: 488 HGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAW 547

Query: 431 TSMISS---YVHNGLANEALELFYLMNEAN 457
            S++SS   Y +  LA  A E   L+   N
Sbjct: 548 GSLLSSCKVYKNVDLAKVAAERLLLIEPNN 577



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 226/499 (45%), Gaps = 78/499 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAF 59
           ++  CG V  A   F+ +S+R + +WN+M+     +G     L+ +S  ++   +  D F
Sbjct: 182 LHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRF 241

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC------------- 106
           +    + ACA L+ L  G +IHG +++  +D++  + N+L++MYAK              
Sbjct: 242 SLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQS 301

Query: 107 --------------------YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALG 146
                                D   ARQ+F+ + +  DVV W ++I  Y  +G   +A+ 
Sbjct: 302 GISDLDVIAFTALLNGYVKLGDITPARQIFNSLKD-PDVVAWTAMIVGYVQNGLNNDAIE 360

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           +F+ M   G   N++T  A L A    +    G +IHA+ ++SG+ L   V NAL  MYA
Sbjct: 361 VFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYA 420

Query: 207 RCGKMTEAAGVLYQL-ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
           + G +  A  V   L +N+D+VSW SM+    Q+ L  +A++ F ++   G KPD +  V
Sbjct: 421 KAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYV 480

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
             +SA    G +  G+           + ++   +  +  YA  C V+  GR        
Sbjct: 481 GVLSACTHGGLVEQGRSYF------DLMKNVHKIDPTLSHYA--CMVDLFGR-------- 524

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
                    AG  Q        E ++ V+   ++ DV+  GS+L +C   K +   K   
Sbjct: 525 ---------AGLLQ--------EAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAA 567

Query: 386 GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV-----VSWTSMISSY--- 437
             ++    ++    +A+ +VY  CG  D +  + + ++++ V     +SW  + +     
Sbjct: 568 ERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVF 627

Query: 438 -VHNGLANEALELFYLMNE 455
            V +GL  +  E++ +M++
Sbjct: 628 GVEDGLHPQKDEIYKMMDK 646


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 249/655 (38%), Positives = 389/655 (59%), Gaps = 2/655 (0%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IHAA ++ G +   Y+ N ++      G    +  +L Q +  +   +N+M+ G V ND 
Sbjct: 29  IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           + ++++ +  ++  G  PD       + A  R+ +   G ++H+  +K G  +D  +  +
Sbjct: 89  FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKIS 148

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+++Y KC  ++   +VF  +  ++F SWT  I+GY       +A+++FR +   GL  D
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFE 420
              +  VL AC     +   + I  YI   G+  ++ +  A+VD YGKCGN++ +R+VF+
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFD 268

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  K++VSW+SMI  Y  NGL  EAL+LF+ M    ++ D   +V  L + + L  L+ 
Sbjct: 269 GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALEL 328

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           G   +  I    F     + ++L+DMYA+CG +D A +VF  ++ KD ++W + I+   +
Sbjct: 329 GDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAM 388

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
            G  K A+ LF +ME     PD  TF+ LL AC+H+GL+ EG+++   M C + L P  E
Sbjct: 389 SGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIE 448

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY C+VDLLGRA  L+EA+Q ++SM +E  A VW ALLG CR+H + +L E+V KKL+ L
Sbjct: 449 HYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIAL 508

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           +P + GNYVL+SN++AAS KW++  ++R  M   G+KK PG SWIE+   +H F+  D S
Sbjct: 509 EPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTS 568

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H  S++IY KL E+ + L +  GYV  T  VL ++EEEEK   +  HSE+LA+A+G++ +
Sbjct: 569 HPLSEKIYAKLGELAKDL-KAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLIST 627

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                I + KNLRVC DCH   K +SR+ GRE++VRD NRFH F  G+CSC DYW
Sbjct: 628 APNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 219/446 (49%), Gaps = 46/446 (10%)

Query: 13  QLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           ++ D+  +  +F +N M+   V N      +E Y  MR  G+S D+FTFP V+KACA + 
Sbjct: 63  RILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVL 122

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D + G K+H LV+K G ++  F+  SL+ +Y KC     A ++FD + +K +   W + I
Sbjct: 123 DSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDK-NFASWTATI 181

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           S Y   G+C EA+ +FR +  +GL  ++++ V  L AC+ +     G  I     ++G  
Sbjct: 182 SGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMV 241

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
             V+VA AL+  Y +CG M  A  V   +  K+ VSW+SM+ G+  N L  +A+  F ++
Sbjct: 242 RNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKM 301

Query: 253 QGAGQKPDQVCTVNAVSASGRLG---------NLLNGKELHAYAIKQGFVSDLQIGNTLM 303
              G KPD    V  + +  RLG         NL+NG E         F+ +  +G  L+
Sbjct: 302 LNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNE---------FLDNSVLGTALI 352

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMYAKC  ++    VF  M  +D + W   I+G A +     AL LF  ++  G+  D  
Sbjct: 353 DMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRN 412

Query: 364 IIGSVLMACS-------------GLKCM-SQTKEIHGYIIRKGLSDLVILNAIVDVYGKC 409
               +L AC+              ++C+ + T EI  Y              +VD+ G+ 
Sbjct: 413 TFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHY------------GCMVDLLGRA 460

Query: 410 GNIDYSRNVFESIESK-DVVSWTSMI 434
           G +D +  + +S+  + + + W +++
Sbjct: 461 GCLDEAHQLIKSMPMEANAIVWGALL 486



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 251/503 (49%), Gaps = 11/503 (2%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           IH  +L+ G D   +++N ++       +   + ++ D+  E  ++ L+N++I     + 
Sbjct: 29  IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEP-NIFLFNTMIRGLVLND 87

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
              E++ ++  M++ GL  +++TF   L+AC       LG+++H+  VK+G     +V  
Sbjct: 88  CFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKI 147

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP 259
           +LI +Y +CG +  A  V   + +K+  SW + ++G+V      +A+  FR L   G +P
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRP 207

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D    V  +SA  R G+L +G+ +  Y  + G V ++ +   L+D Y KC  +     VF
Sbjct: 208 DSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVF 267

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
             M  ++ +SW+++I GYA N    +AL+LF  +  EGL  D   +  VL +C+ L  + 
Sbjct: 268 DGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALE 327

Query: 380 ----QTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
                +  I+G    + L + V+  A++D+Y KCG +D +  VF  +  KD V W + IS
Sbjct: 328 LGDWASNLING---NEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAIS 384

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFN 494
               +G   +AL LF  M ++ ++ D  T V  L A +   ++++G+   N         
Sbjct: 385 GLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLT 444

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYK 553
            E      +VD+  R G LD A+++   +  + + I+W +++    LH   ++   +  K
Sbjct: 445 PEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKK 504

Query: 554 MEA-ESFAPDHITFLALLYACSH 575
           + A E +   +   L+ +YA SH
Sbjct: 505 LIALEPWHSGNYVLLSNIYAASH 527



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 181/357 (50%), Gaps = 3/357 (0%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K +HA  ++ G   D  + N ++         NY  R+  Q    +   + T+I G   N
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
           +C  +++E++ +++ EGL  D      VL AC+ +       ++H  +++ G  +D  + 
Sbjct: 87  DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
            +++++Y KCG ID +  VF+ I  K+  SWT+ IS YV  G   EA+++F  + E  + 
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            DS +LV  LSA      L+ G+ ++ +I   G      VA++LVD Y +CG ++ A  V
Sbjct: 207 PDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSV 266

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F+ +  K+++ W+SMI     +G  K A+DLF+KM  E   PD    + +L +C+  G +
Sbjct: 267 FDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGAL 326

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
             G     ++  +  LD      A L+D+  +   ++ A++  R M+ +    VW A
Sbjct: 327 ELGDWASNLINGNEFLDNSVLGTA-LIDMYAKCGRMDRAWEVFRGMRKKDRV-VWNA 381



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 166/340 (48%), Gaps = 7/340 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + +A ++FD +  +   +W A +  YV  G+    ++ + R+  +G+  D+F+
Sbjct: 152 LYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFS 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC    DL  G  I   + + G     F+  +LV  Y KC +  +AR +FD M 
Sbjct: 212 LVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGML 271

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK ++V W+S+I  Y+++G   EAL LF +M   GL  + Y  V  L +C  +    L +
Sbjct: 272 EK-NIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSC--ARLGALEL 328

Query: 181 EIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
              A+ + +G        +  ALI MYA+CG+M  A  V   +  KD V WN+ ++G   
Sbjct: 329 GDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAM 388

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQ 297
           +     A+  F +++ +G KPD+   V  + A    G +  G+   ++         +++
Sbjct: 389 SGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIE 448

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG 336
               ++D+  +  C++   ++   M  + + I W  ++ G
Sbjct: 449 HYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGG 488



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 129/266 (48%), Gaps = 3/266 (1%)

Query: 374 GLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
           G  C+   K IH  ++R GL  D  +LN ++      GN +YS  + +  +  ++  + +
Sbjct: 19  GFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNT 78

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MI   V N    E++E+++ M +  +  DS T    L A + +   + G +++  +++ G
Sbjct: 79  MIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAG 138

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
              +  V  SL+++Y +CG +D A KVF+ +  K+   WT+ I+     G+ + AID+F 
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFR 198

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           ++      PD  + + +L AC  +G +  G+   E +  +  +       A LVD  G+ 
Sbjct: 199 RLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATA-LVDFYGKC 257

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALL 638
            ++E A      M +E     W +++
Sbjct: 258 GNMERARSVFDGM-LEKNIVSWSSMI 282


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 280/771 (36%), Positives = 440/771 (57%), Gaps = 19/771 (2%)

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           DL  G  +H  +L+      D +V NSL+ +Y++C     AR +FD M    D+V W ++
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC-EDSSFETLGMEIHAATVKSG 190
            S  + +G   E+L L  EM   GL+ NAYT  A   AC     +  +G  +     K G
Sbjct: 123 ASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMG 182

Query: 191 -QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
                + V +ALI M AR G +  A  V   L  K  V W  +++ +VQ +   +A++ F
Sbjct: 183 LWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIF 242

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            +    G +PD+    + +SA   LG++  G +LH+ A++ GF SD  +   L+DMYAK 
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKS 302

Query: 310 C---CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL-KALELFRTVQLEGLDADVMII 365
                ++Y  +VF +M   D ISWT +I+GY Q+     K + LF  +  E +  + +  
Sbjct: 303 NIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITY 362

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIES 424
            S+L AC+ +      +++H ++I+   +    + NA+V +Y + G ++ +R VF  +  
Sbjct: 363 SSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYE 422

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           +      SMIS       A     L + +   ++   S T  S +SAA+S+ +L KG++L
Sbjct: 423 R------SMISCITEGRDA----PLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQL 472

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +   ++ GF  +  V++SLV MY+RCG L+ A + FN ++ +++I WTSMI+    HG  
Sbjct: 473 HAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYA 532

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC 604
           + A+ LF+ M      P+ +T++A+L ACSH GL+ EGK++   M+ D+ L P  EHYAC
Sbjct: 533 ERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC 592

Query: 605 LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGN 664
           +VDLL R+  ++EA +F+  M ++  A VW  LLGACR H N E+GEI AK ++EL+P +
Sbjct: 593 MVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRD 652

Query: 665 PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSES 724
           P  YVL+SN++A +  W +V ++R  MR + L K  G SW+E+ N  H F A D SH  +
Sbjct: 653 PAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRA 712

Query: 725 DEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGS 784
            +IY KL  +  ++ +  GYV  T  VLH++ +E K Q L  HSE++A+A+G++ ++   
Sbjct: 713 QDIYGKLDTLVGEI-KGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPK 771

Query: 785 LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            IRI KNLRVC DCHS  K +S+   RE+++RD+NRFH  + G CSCG+YW
Sbjct: 772 PIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 166/605 (27%), Positives = 290/605 (47%), Gaps = 32/605 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           +Y +CG+V  A  +FD +   R + +W AM      NG     L     M   G+  +A+
Sbjct: 93  LYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNAY 152

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVL--KCGYDSTDFIVNS-LVAMYAKCYDFRKARQLF 116
           T   V  AC    +L C      L L  K G   TD  V S L+ M A+  D   AR++F
Sbjct: 153 TLCAVAHAC-FPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVF 211

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCL-EALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           D + EK  VV+W  +IS Y   G+C  EA+ +F +    G   + YT  + + AC +   
Sbjct: 212 DGLIEKT-VVVWTLLISRY-VQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGS 269

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCG---KMTEAAGVLYQLENKDSVSWNSM 232
             LG+++H+  ++ G      V+  L+ MYA+      M  A  V  ++   D +SW ++
Sbjct: 270 VRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTAL 329

Query: 233 LTGFVQNDLY-CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++G+VQ+ +   K M  F E+     KP+ +   + + A   + +  +G+++HA+ IK  
Sbjct: 330 ISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSN 389

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
             +   +GN L+ MYA+  C+    RVF Q+  +  IS  T            +   L  
Sbjct: 390 QAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCIT----------EGRDAPLDH 439

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
            +    +        S++ A + +  +++ +++H   ++ G  SD  + N++V +Y +CG
Sbjct: 440 RIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCG 499

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            ++ +   F  ++ ++V+SWTSMIS    +G A  AL LF+ M    V+ + +T ++ LS
Sbjct: 500 YLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLS 559

Query: 471 AASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DL 528
           A S + ++++GKE    + R  G        + +VD+ AR G +  A +  N +  K D 
Sbjct: 560 ACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADA 619

Query: 529 ILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           ++W +++ A   H     G++A     ++E    AP     L+ LYA   +GL +E  + 
Sbjct: 620 LVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAP--YVLLSNLYA--DAGLWDEVARI 675

Query: 586 LEIMR 590
              MR
Sbjct: 676 RSAMR 680


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 264/760 (34%), Positives = 426/760 (56%), Gaps = 3/760 (0%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G  +H  +LK G     F  N L+  Y +    + A +LFD M +  + + + ++   YS
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQT-NTISFVTLAQGYS 112

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
              Q  +AL     + + G   N + F   L+         L   +HA   K G +   +
Sbjct: 113 RDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAF 172

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V  ALI  Y+  G +  A  V   +  KD VSW  M+  + +N  Y +++Q F +++  G
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            KP+      A+ +   L     GK +H  A+K  +  DL +G  L+++YAK   +    
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           R+F +M   D I W+ +IA YAQ++   +AL+LF  ++   +  +     SVL AC+   
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +   K+IH  +++ GL S++ + NAI+DVY KCG I+ S  +FE +  ++ V+W ++I 
Sbjct: 353 SLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIV 412

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            YV  G    A+ LF  M E +++   +T  S L A++SL+ L+ G +++   I+  +N 
Sbjct: 413 GYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNK 472

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  VA+SL+DMYA+CG ++ A   F+ +  +D + W +MI    +HG    A++LF  M+
Sbjct: 473 DTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQ 532

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
                P+ +TF+ +L ACS++GL+ +G+   E M  DY + P  EHY C+V LLGR    
Sbjct: 533 HTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRF 592

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           +EA + +  +  +P+  VW ALLGAC +H   +LG + A+ +LE++P +   +VL+SN++
Sbjct: 593 DEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMY 652

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           A + +W +V  VR  M+   ++K PG SW+E    +H F   D SH +   I   L  + 
Sbjct: 653 ATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLN 712

Query: 736 EKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVC 795
           +K  R+ GYV     VL +V+++EK + L+ HSERLA+AYG++++     IRI KNLR+C
Sbjct: 713 KK-TRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRIC 771

Query: 796 VDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +DCH+  KL+S++  RE+V+RD NRFHHF  GVCSCGDYW
Sbjct: 772 IDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 205/373 (54%), Gaps = 1/373 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G+V  A  +FD +  + + +W  M+  Y  N      L+ +++MR++G   + FT 
Sbjct: 181 YSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTI 240

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              +K+C  L+  + G  +HG  LK  YD   F+  +L+ +YAK  +   A++LF+ M  
Sbjct: 241 SGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEM-P 299

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D++ W+ +I+ Y+ S +  EAL LF  M++  +V N +TF + LQAC  S    LG +
Sbjct: 300 KTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQ 359

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH+  +K G N  V+V+NA++ +YA+CG++  +  +  +L +++ V+WN+++ G+VQ   
Sbjct: 360 IHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGD 419

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +AM  F  +     +P +V   + + AS  L  L  G ++H+  IK  +  D  + N+
Sbjct: 420 GERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANS 479

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC  +N     F +M  +D +SW  +I GY+ +   ++AL LF  +Q      +
Sbjct: 480 LIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPN 539

Query: 362 VMIIGSVLMACSG 374
            +    VL ACS 
Sbjct: 540 KLTFVGVLSACSN 552



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 155/281 (55%), Gaps = 1/281 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G ++DA++LF+++ +  +  W+ M+  Y  +      L+ + RMR   +  + FT
Sbjct: 281 LYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFT 340

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V++ACA    LD G +IH  VLK G +S  F+ N+++ +YAKC +   + +LF+ + 
Sbjct: 341 FASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP 400

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ DV  WN+II  Y   G    A+ LF  M    +     T+ + L+A    +    G+
Sbjct: 401 DRNDVT-WNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGL 459

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH+ T+K+  N    VAN+LI MYA+CG++ +A     ++  +D VSWN+M+ G+  + 
Sbjct: 460 QIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHG 519

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
           +  +A+  F  +Q    KP+++  V  +SA    G L  G+
Sbjct: 520 MSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQ 560


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/657 (38%), Positives = 398/657 (60%), Gaps = 6/657 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG-FVQN 239
            +HA  + S       +++ L A YAR G +  A   L       S++  + +     + 
Sbjct: 29  RLHALLIVSSSASHTLISS-LAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRR 87

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A++ FR L  A  +PD      A+SA  RLG+L  G+ +   A   G+  D+ + 
Sbjct: 88  GSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVC 146

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           ++L+ +YA+   +    +VF +M  +D ++W+T++AG+      L A++++R ++ +G+ 
Sbjct: 147 SSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVK 206

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            D +++  V+ AC+  + +     +HG+++R G+  D+V   ++VD+Y K G +D +  V
Sbjct: 207 GDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRV 266

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  +  ++ VSW++MIS +  NG ++EAL LF  M  + ++ DS  LVSAL A S++  L
Sbjct: 267 FGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFL 326

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           K G+ ++GFI+R+ F+    + ++ +DMY++CG+L  A  +FN +  +DLILW +MI   
Sbjct: 327 KLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACC 385

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
           G HGRG+ A+ LF +M      PDH TF +LL A SHSGL+ EGK +   M   +++ P 
Sbjct: 386 GAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPA 445

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            +HY CLVDLL R+  +EEA   + SM+ EPT  +W ALL  C  +   ELGE +A  +L
Sbjct: 446 EKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNIL 505

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           EL P + G   L+SN++AA++KW  V QVR  M+ SG KK PG S IEI    H F+  D
Sbjct: 506 ELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMED 565

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           +SH + +EI  K+A++  ++ R+ GY+ +T+FV H++EEE K Q L  HSERLAIA+G+L
Sbjct: 566 QSHPQREEIVSKVAKLDLEM-RKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLL 624

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +  G+ + I KNLRVC DCH   K +S++  RE+VVRDA RFHHF+ GVCSC DYW
Sbjct: 625 NTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 255/503 (50%), Gaps = 11/503 (2%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           A++H L++     ++  +++SL A YA+  D   A            +  WN+II+A+S 
Sbjct: 28  ARLHALLI-VSSSASHTLISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSR 86

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
            G    AL +FR +       ++ TF  AL AC        G  +      +G    V+V
Sbjct: 87  RGSPASALRVFRALPPAAR-PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFV 145

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
            ++L+ +YAR G M +A  V  ++  +D V+W++M+ GFV       A+Q +R ++  G 
Sbjct: 146 CSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGV 205

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           K D+V  +  + A     N+  G  +H + ++ G   D+    +L+DMYAK   ++   R
Sbjct: 206 KGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACR 265

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF  M  ++ +SW+ +I+G+AQN    +AL LFR +Q  G+  D   + S L+ACS +  
Sbjct: 266 VFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGF 325

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
           +   + +HG+I+R+   + ++  A +D+Y KCG++  ++ +F  I  +D++ W +MI+  
Sbjct: 326 LKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACC 385

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             +G   +AL LF  MNE  +  D  T  S LSA S   ++++GK   G ++   F +  
Sbjct: 386 GAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNH-FKITP 444

Query: 498 SVAS--SLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGRGKVAIDLFYKM 554
           +      LVD+ AR G ++ A+ +   ++ +  + +W +++  +G     K+ +      
Sbjct: 445 AEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALL--SGCLNNKKLELGESIAD 502

Query: 555 EAESFAPDHITFLAL---LYACS 574
                 PD +  LAL   LYA +
Sbjct: 503 NILELQPDDVGVLALVSNLYAAT 525



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 213/428 (49%), Gaps = 21/428 (4%)

Query: 36  NGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI 95
            G P   L  + R        D+ TF   + ACA L DL  G  +       GY    F+
Sbjct: 87  RGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFV 145

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            +SL+ +YA+      A ++F RM  + D V W+++++ + ++GQ L+A+ ++R M+  G
Sbjct: 146 CSSLLHLYARWGAMGDAVKVFVRM-PRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG 204

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           +  +    +  +QAC  +    +G  +H   ++ G  + V  A +L+ MYA+ G +  A 
Sbjct: 205 VKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVAC 264

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            V   + +++ VSW++M++GF QN    +A++ FR +Q +G +PD    V+A+ A   +G
Sbjct: 265 RVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIG 324

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            L  G+ +H + +++ F  +  +G   +DMY+KC  +     +F  ++ +D I W  +IA
Sbjct: 325 FLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIA 383

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
               +     AL LF+ +   G+  D     S+L A S    + + K   G ++    + 
Sbjct: 384 CCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMV----NH 439

Query: 396 LVILNA------IVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISSYVHN-------G 441
             I  A      +VD+  + G ++ + ++  S++++  V+ W +++S  ++N        
Sbjct: 440 FKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGES 499

Query: 442 LANEALEL 449
           +A+  LEL
Sbjct: 500 IADNILEL 507



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 187/380 (49%), Gaps = 13/380 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G++ DA ++F ++ +R   TW+ M+  +VS G+PL  ++ Y RMR  G+  D   
Sbjct: 152 LYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVV 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI+AC   +++  GA +HG +L+ G         SLV MYAK      A ++F  M 
Sbjct: 212 MIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMV 271

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DV  W+++IS ++ +GQ  EAL LFR MQ  G+  ++   V+AL AC +  F  LG 
Sbjct: 272 HRNDVS-WSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGR 330

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   V+   +    +  A I MY++CG +  A  +   + ++D + WN+M+     + 
Sbjct: 331 SVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHG 389

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+  F+E+   G +PD     + +SA    G +  GK      +    ++  +   
Sbjct: 390 RGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHY 449

Query: 301 T-LMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAGYAQNNCHLKALELFRTV----- 353
             L+D+ A+   V     +   M A+  ++ W  +++G   N    K LEL  ++     
Sbjct: 450 VCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNN----KKLELGESIADNIL 505

Query: 354 QLEGLDADVMIIGSVLMACS 373
           +L+  D  V+ + S L A +
Sbjct: 506 ELQPDDVGVLALVSNLYAAT 525


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/754 (36%), Positives = 419/754 (55%), Gaps = 3/754 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CG   DA  LF ++  R    WN M+      G     L  Y +M    +S D +T
Sbjct: 55  LYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYT 114

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP VIKAC  L ++     +H      G+    F  ++L+ +YA     R AR++FD + 
Sbjct: 115 FPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELP 174

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D +LWN ++  Y  SG    A+G F EM+    + N+ T+   L  C        G 
Sbjct: 175 LR-DTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGT 233

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   + SG      VAN L+AMY++CG +  A  +   +   D+V+WN ++ G+VQN 
Sbjct: 234 QLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNG 293

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F  +  AG KPD V   + + +    G+L + KE+H+Y ++     D+ + +
Sbjct: 294 FTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKS 353

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y K   V    ++F Q    D    T +I+GY  +  ++ A+  FR +  EG+  
Sbjct: 354 ALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVT 413

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVF 419
           + + + SVL AC+ +  +   KE+H +I++K L ++V + +AI D+Y KCG +D +   F
Sbjct: 414 NSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFF 473

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  +D V W SMISS+  NG    A++LF  M  +  + DS++L SALSAA++L  L 
Sbjct: 474 RRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALY 533

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GKE++G++IR  F+ +  VAS+L+DMY++CG L +A  VFN +  K+ + W S+I A G
Sbjct: 534 YGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYG 593

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG  +  +DL+++M      PDH+TFL ++ AC H+GL++EG  +   M  +Y +    
Sbjct: 594 NHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARM 653

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC+VDL GRA  + EA+  ++SM   P A VW  LLGACR+H N EL ++ ++ LLE
Sbjct: 654 EHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLE 713

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LDP N G YVL+SNV A + +W  V +VR  M+  G++K PG SWI++    H F A D 
Sbjct: 714 LDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADG 773

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
           +H ES EIY    +      R+ GYV Q    LH
Sbjct: 774 NHPESVEIYLI-LKSLLLELRKQGYVPQPYLPLH 806



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 257/492 (52%), Gaps = 2/492 (0%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           + +AC+    +    ++H  V+  G        + ++ +Y  C  FR A  LF  + E  
Sbjct: 17  LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFEL-ELR 75

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
             + WN +I      G    AL  + +M    +  + YTF   ++AC   +   L M +H
Sbjct: 76  YALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 135

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
                 G ++ ++  +ALI +YA  G + +A  V  +L  +D++ WN ML G+V++  + 
Sbjct: 136 DTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFD 195

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
            A+  F E++ +    + V     +S     GN   G +LH   I  GF  D Q+ NTL+
Sbjct: 196 NAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLV 255

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
            MY+KC  + Y  ++F  M   D ++W  +IAGY QN    +A  LF  +   G+  D +
Sbjct: 256 AMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSV 315

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESI 422
              S L +      +   KE+H YI+R  +  D+ + +A++DVY K G+++ +R +F+  
Sbjct: 316 TFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQN 375

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
              DV   T+MIS YV +GL  +A+  F  + +  + ++S+T+ S L A ++++ LK GK
Sbjct: 376 ILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGK 435

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           EL+  I++K      +V S++ DMYA+CG LD+A + F  +  +D + W SMI++   +G
Sbjct: 436 ELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNG 495

Query: 543 RGKVAIDLFYKM 554
           + ++AIDLF +M
Sbjct: 496 KPEIAIDLFRQM 507



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 222/461 (48%), Gaps = 2/461 (0%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
            +AC D+S      ++H   +  G       ++ ++ +Y  CG+  +A  + ++LE + +
Sbjct: 18  FRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYA 77

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           + WN M+ G      +  A+ F+ ++ G+   PD+      + A G L N+     +H  
Sbjct: 78  LPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDT 137

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
           A   GF  DL  G+ L+ +YA    +    RVF ++  +D I W  ++ GY ++     A
Sbjct: 138 ARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNA 197

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDV 405
           +  F  ++      + +    +L  C+         ++HG +I  G   D  + N +V +
Sbjct: 198 IGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAM 257

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y KCGN+ Y+R +F ++   D V+W  +I+ YV NG  +EA  LF  M  A V+ DS+T 
Sbjct: 258 YSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTF 317

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S L +      L+  KE++ +I+R     +  + S+L+D+Y + G +++A K+F     
Sbjct: 318 ASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNIL 377

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
            D+ + T+MI+   LHG    AI+ F  +  E    + +T  ++L AC+    +  GK+ 
Sbjct: 378 VDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKE- 436

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           L       +L+      + + D+  +   L+ AY+F R M 
Sbjct: 437 LHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 477



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 2/244 (0%)

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDY 414
           E LD+    + S+  ACS    + Q +++H  +I  G+ D+   ++ ++ +Y  CG    
Sbjct: 5   ETLDSLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRD 64

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           + N+F  +E +  + W  MI      G  + AL  ++ M  +NV  D  T    + A   
Sbjct: 65  AGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGG 124

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L+ +     ++      GF+++    S+L+ +YA  G +  A +VF+ +  +D ILW  M
Sbjct: 125 LNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVM 184

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDY 593
           +      G    AI  F +M       + +T+  +L  C+  G    G +    ++   +
Sbjct: 185 LRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGF 244

Query: 594 QLDP 597
           + DP
Sbjct: 245 EFDP 248


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 288/856 (33%), Positives = 489/856 (57%), Gaps = 29/856 (3%)

Query: 1    MYGKC--GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV----LGI 54
            MYG C  G  + A+++FD    R + TWNA++  Y   G+       +  M+     + +
Sbjct: 211  MYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQL 270

Query: 55   SVDAFTFPCVIKACAMLKD----LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR 110
                 TF  +I A ++       LD   ++   VLK G  S  ++ ++LV+ +A+     
Sbjct: 271  RPTEHTFGSLITAASLSSGSSAVLD---QVLVWVLKSGCSSDLYVGSALVSAFARHGLTD 327

Query: 111  KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
            +A+ +F  + +K  V L N +I          EA+ +F    R  +  NA T+V  L A 
Sbjct: 328  EAKDIFLSLKQKNAVTL-NGLIVGLVRQDFSEEAVKIFVG-TRNTVDVNADTYVVLLSAL 385

Query: 171  EDSSFETLGMEI----HAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD 225
             + S    G+ I    H   +++G  +L++ V+N L+ MYA+CG +  A+ +   +E  D
Sbjct: 386  AEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATD 445

Query: 226  SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
             +SWN++++   QN    +A+  +  ++ +   P     ++++S+   L  L  G+++H 
Sbjct: 446  RISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHC 505

Query: 286  YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
             A+K G   D  + N L+ MY +C  ++   +VF  M   D +SW T++   A +   + 
Sbjct: 506  DAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPIS 565

Query: 346  AL-ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIV 403
             + ++F  +   GL  + +   ++L A S L  +   K++H  +++ G + D V+ NA++
Sbjct: 566  EIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALI 625

Query: 404  DVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
              Y K G++    ++F ++ + +D +SW SMIS Y++NG   EA++  +LM  +    D 
Sbjct: 626  SCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDC 685

Query: 463  ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
             T    L+A +S++ L++G EL+ F IR     +  V S+LVDMY++CG +D A+K+FN 
Sbjct: 686  CTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNS 745

Query: 523  VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
            +  ++   W SMI+    HG G+ AI++F +M     +PDH+TF+++L ACSH+GL+  G
Sbjct: 746  MTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERG 805

Query: 583  KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
             ++ E+M  D+ + P  EHY+C++DLLGRA  +++  ++++ M IEP A +W  +L ACR
Sbjct: 806  LEYFEMMP-DHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACR 864

Query: 643  VH---SNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
                 SN +LG   ++ LLE++P NP NYVL SN  AA+  W+D  + R  MR +  KK 
Sbjct: 865  QSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKE 924

Query: 700  PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
             G SW+ + + +H+FIA D+SH  + EIY+KL  + + + R  GYV  T++ L+++EEE 
Sbjct: 925  AGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNI-RNAGYVPLTEYALYDLEEEN 983

Query: 760  KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDAN 819
            K ++L  HSE+LAIA+ + +S+ G  IRI KNLRVC DCH   + +S++  R++++RD+ 
Sbjct: 984  KEELLSYHSEKLAIAFVLTRSSSGP-IRIMKNLRVCGDCHIAFRYISQMISRQIILRDSI 1042

Query: 820  RFHHFEAGVCSCGDYW 835
            RFHHF+ G CSCGDYW
Sbjct: 1043 RFHHFKDGKCSCGDYW 1058



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 177/646 (27%), Positives = 316/646 (48%), Gaps = 27/646 (4%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGISVDA 58
           Y K   +  A Q+FD++ +R   +W  ++  YV +G   E  RV     R    G    +
Sbjct: 106 YAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTS 165

Query: 59  FTFPCVIKAC--AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK--ARQ 114
           FTF  +++AC       L    ++HGLV K  Y S   + N+L++MY  C       A++
Sbjct: 166 FTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQR 225

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ----RVGLVTNAYTFVAALQAC 170
           +FD    + D++ WN+++S Y+  G       LF++MQ    R+ L    +TF + + A 
Sbjct: 226 VFDGTPIR-DLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAA 284

Query: 171 EDSSFETLGM-EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
             SS  +  + ++    +KSG +  +YV +AL++ +AR G   EA  +   L+ K++V+ 
Sbjct: 285 SLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTL 344

Query: 230 NSMLTGFVQNDLYCKAMQFF---RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           N ++ G V+ D   +A++ F   R           V        S     L  G+ +H +
Sbjct: 345 NGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGH 404

Query: 287 AIKQGFVSDLQIG--NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN-NCH 343
            ++ G ++DL+I   N L++MYAKC  +    ++F  M A D ISW TII+   QN NC 
Sbjct: 405 MLRTG-LTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCE 463

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAI 402
            +A+  +  ++   +      + S L +C+GLK ++  +++H   ++ GL  D  + N +
Sbjct: 464 -EAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVL 522

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA-NEALELFYLMNEANVESD 461
           V +YG+CG +     VF S+   D VSW +M+     +    +E +++F  M    +  +
Sbjct: 523 VKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPN 582

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF- 520
            +T ++ L+A S LS+L+ GK+++  +++ G   +  V ++L+  YA+ G +     +F 
Sbjct: 583 KVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFT 642

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
           N    +D I W SMI+    +G  + A+D  + M       D  TF  +L AC+    + 
Sbjct: 643 NMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALE 702

Query: 581 EGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
            G +     +R   + D   E  + LVD+  +   ++ A +   SM
Sbjct: 703 RGMELHAFGIRSHLESDVVVE--SALVDMYSKCGRVDYASKLFNSM 746



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 263/540 (48%), Gaps = 39/540 (7%)

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D +    +H  ++K G +   F+ N LV  YAK      A Q+FD M E+ + V W  ++
Sbjct: 76  DANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPER-NAVSWTCLV 134

Query: 133 SAYSASGQCLEALGLFREMQR---VGLVTNAYTFVAALQACEDSSFETLG--MEIHAATV 187
           S Y   G   EA  +FR M R    G    ++TF   L+AC+D   + LG  +++H    
Sbjct: 135 SGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVS 194

Query: 188 KSGQNLQVYVANALIAMYARC--GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
           K+       V NALI+MY  C  G    A  V      +D ++WN++++ + +       
Sbjct: 195 KTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVAST 254

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-----------KELHAYAIKQGFVS 294
              F+++Q    +      +         G+L+              ++  + +K G  S
Sbjct: 255 FTLFKDMQRGDSR------IQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSS 308

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF---- 350
           DL +G+ L+  +A+    +    +F  +  ++ ++   +I G  + +   +A+++F    
Sbjct: 309 DLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTR 368

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL--NAIVDVYGK 408
            TV +   D  V+++ ++       + +   + +HG+++R GL+DL I   N +V++Y K
Sbjct: 369 NTVDVNA-DTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAK 427

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           CG I+ +  +F+ +E+ D +SW ++IS+   NG   EA+  + LM ++ +   +  L+S+
Sbjct: 428 CGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISS 487

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           LS+ + L +L  G++++   ++ G +L+ SV++ LV MY  CGA+    KVFN +   D 
Sbjct: 488 LSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDE 547

Query: 529 ILWTSMINANGLHGRGKVAID----LFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           + W +M+   G+    +  I     +F  M      P+ +TF+ LL A S   ++  GK+
Sbjct: 548 VSWNTMM---GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQ 604



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 250/517 (48%), Gaps = 28/517 (5%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +K G N  +++ N L+  YA+  ++  A+ V  ++  +++VSW  +++G+V + +
Sbjct: 83  LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142

Query: 242 YCKAMQFF----RELQGAGQKPDQVC--TVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
             +A + F    RE+Q AG +P      T+      G    L    ++H    K  + S+
Sbjct: 143 AEEAFRVFRAMLREVQ-AGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASN 201

Query: 296 LQIGNTLMDMYAKCCCVNYM--GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
             + N L+ MY  C     +   RVF     +D I+W  +++ YA+         LF+ +
Sbjct: 202 TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM 261

Query: 354 QLEG----LDADVMIIGSVLMACSGLKCMSQT-KEIHGYIIRKGL-SDLVILNAIVDVYG 407
           Q       L       GS++ A S     S    ++  ++++ G  SDL + +A+V  + 
Sbjct: 262 QRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFA 321

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVESDS-ITL 465
           + G  D ++++F S++ K+ V+   +I   V    + EA+++F    N  +V +D+ + L
Sbjct: 322 RHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVL 381

Query: 466 VSALSAAS-SLSILKKGKELNGFIIRKGF-NLEGSVASSLVDMYARCGALDIANKVFNCV 523
           +SAL+  S S   L+ G+ ++G ++R G  +L+ +V++ LV+MYA+CGA++ A+K+F  +
Sbjct: 382 LSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLM 441

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           +  D I W ++I+A   +G  + A+  +  M     +P +   ++ L +C+   L+  G+
Sbjct: 442 EATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQ 501

Query: 584 KFLEIMRCD---YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           +    + CD   + LD        LV + G    + + ++   SM  E     W  ++G 
Sbjct: 502 Q----VHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMA-EHDEVSWNTMMGV 556

Query: 641 CRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
               S   + EIV      +  G   N V   N+ AA
Sbjct: 557 M-ASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAA 592



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 95/422 (22%), Positives = 189/422 (44%), Gaps = 26/422 (6%)

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           R G+  + + LH   IK+G   DL + N L++ YAK   +    +VF +M  ++ +SWT 
Sbjct: 73  RGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTC 132

Query: 333 IIAGYAQNNCHLKALELFRTVQLE---GLDADVMIIGSVLMACS--GLKCMSQTKEIHGY 387
           +++GY  +    +A  +FR +  E   G        G++L AC   G   +    ++HG 
Sbjct: 133 LVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGL 192

Query: 388 IIRKGL-SDLVILNAIVDVYGKC--GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           + +    S+  + NA++ +YG C  G    ++ VF+    +D+++W +++S Y   G   
Sbjct: 193 VSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVA 252

Query: 445 EALELFYLMNEAN-------VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
               LF  M   +        E    +L++A S +S  S +    ++  ++++ G + + 
Sbjct: 253 STFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVL--DQVLVWVLKSGCSSDL 310

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            V S+LV  +AR G  D A  +F  ++ K+ +    +I         + A+ +F      
Sbjct: 311 YVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTR-N 369

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC----LVDLLGRAN 613
           +   +  T++ LL A +   +  EG +   ++          +        LV++  +  
Sbjct: 370 TVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCG 429

Query: 614 HLEEAYQFVRSMQIEPTAEV-WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
            +E A +  + M  E T  + W  ++ A   + N E   ++   L+     +P N+ LIS
Sbjct: 430 AIESASKIFQLM--EATDRISWNTIISALDQNGNCEEA-VMHYSLMRQSCISPSNFALIS 486

Query: 673 NV 674
           ++
Sbjct: 487 SL 488


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/680 (36%), Positives = 395/680 (58%), Gaps = 37/680 (5%)

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
           N+  ++   LI +    G    A  +   +   D  + +++++    + L  +A++ +  
Sbjct: 9   NIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSS 68

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           LQ  G KPD    + A  A    G+ L  KE+H  A + G +SD+ +GN L+  Y KC C
Sbjct: 69  LQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKC 128

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           V    RVF  +  +D +SWT++ + Y +     K +++FR +   G+  + M + S+L A
Sbjct: 129 VEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPA 188

Query: 372 CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           C+ LK +   KEIHG+ +R G+  +L + +A+V +Y KC ++  +R VF+ +  +DVVSW
Sbjct: 189 CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSW 248

Query: 431 TSMISSY-----------------------------------VHNGLANEALELFYLMNE 455
             ++++Y                                   + NG + EA+E+F  M +
Sbjct: 249 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 308

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
              + + IT+ S L A S    L+ GKE++ ++ R     + +  ++L+ MYA+CG L++
Sbjct: 309 MGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNL 368

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           +  VF+ ++ KD++ W +MI AN +HG GK A+ LF KM      P+ +TF  +L  CSH
Sbjct: 369 SRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSH 428

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           S L+ EG +    M  D+ ++P   HY+C+VD+  RA  L EAY+F++ M +EPTA  W 
Sbjct: 429 SRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWG 488

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL ACRV+ N EL +I AKKL E++P NPGNYV + N+   ++ W +  QVR+ M+  G
Sbjct: 489 ALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERG 548

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           + KTPG SW+++GNK+H+F+  DKS+ ESD+IY  L E+ EK+ +  GY   T +VL ++
Sbjct: 549 ITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKM-KMAGYKPDTDYVLQDI 607

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           ++EEK + L  HSE+LA+A+G+L     S IR+ KNLR+C DCH+  K +S++ G  +VV
Sbjct: 608 DQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVV 667

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD+ RFHHF+ G CSC D W
Sbjct: 668 RDSLRFHHFKNGNCSCKDLW 687



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 225/448 (50%), Gaps = 38/448 (8%)

Query: 108 DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
           DF +ARQLFD +  + D    +++ISA +  G   EA+ ++  +Q  G+  +   F+AA 
Sbjct: 27  DFNRARQLFDNI-PQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           +AC  S       E+H    + G    V+V NALI  Y +C  +  A  V   L  +D V
Sbjct: 86  KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 145

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           SW S+ + +V+     K M  FRE+  +G KP+ +   + + A   L +L +GKE+H +A
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFA 205

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-- 345
           ++ G V +L + + L+ +YAKC  V     VF  M  +D +SW  ++  Y +N  + K  
Sbjct: 206 VRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGF 265

Query: 346 ---------------------------------ALELFRTVQLEGLDADVMIIGSVLMAC 372
                                            A+E+FR +Q  G   + + I S+L AC
Sbjct: 266 SLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPAC 325

Query: 373 SGLKCMSQTKEIHGYIIRK-GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           S  + +   KEIH Y+ R   + DL    A++ +Y KCG+++ SRNVF+ +  KDVV+W 
Sbjct: 326 SFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWN 385

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           +MI +   +G   EAL LF  M  + V+ +S+T    LS  S   ++++G ++   + R 
Sbjct: 386 TMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRD 445

Query: 492 GF-NLEGSVASSLVDMYARCGALDIANK 518
                + +  S +VD+Y+R G L+ A K
Sbjct: 446 HLVEPDANHYSCVVDIYSRAGRLNEAYK 473



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 253/558 (45%), Gaps = 66/558 (11%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A QLFD + Q    T + ++ A  ++G     ++ YS ++  GI  D   F    KACA+
Sbjct: 31  ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 90

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
             D     ++H    +CG  S  F+ N+L+  Y KC     AR++FD +  + DVV W S
Sbjct: 91  SGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVR-DVVSWTS 149

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           + S Y   G   + + +FREM   G+  N  T  + L AC +      G EIH   V+ G
Sbjct: 150 LSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHG 209

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK------ 244
             + ++V +AL+++YA+C  + EA  V   + ++D VSWN +LT + +N  Y K      
Sbjct: 210 MVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFL 269

Query: 245 -----------------------------AMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
                                        A++ FR++Q  G KP+++   + + A     
Sbjct: 270 KMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSE 329

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           NL  GKE+H Y  +   V DL     L+ MYAKC  +N    VF  M  +D ++W T+I 
Sbjct: 330 NLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMII 389

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-- 393
             A +    +AL LF  + L  +  + +    VL  CS  + + +  +I   + R  L  
Sbjct: 390 ANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVE 449

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS---YVHNGLAN-EALE 448
            D    + +VD+Y + G ++ +    + +  +   S W +++++   Y +  LA   A +
Sbjct: 450 PDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKK 509

Query: 449 LFYLMNEANVESDSITLVSAL------SAASSLSILKK---------------GKELNGF 487
           LF +  E N   + ++L + L      S AS + IL K               G +++ F
Sbjct: 510 LFEI--EPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTF 567

Query: 488 IIRKGFNLEGSVASSLVD 505
           ++    N+E     + +D
Sbjct: 568 VVGDKSNIESDKIYNFLD 585



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 177/401 (44%), Gaps = 58/401 (14%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YGKC  V  A ++FD +  R V +W ++   YV  G P + ++ +  M   G+  +  T 
Sbjct: 123 YGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTV 182

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ ACA LKDL  G +IHG  ++ G     F+ ++LV++YAKC   R+AR +FD M  
Sbjct: 183 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 242

Query: 122 KEDVVLWNSIISAY-----------------------------SASGQCL------EALG 146
           + DVV WN +++AY                             +  G C+      EA+ 
Sbjct: 243 R-DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVE 301

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           +FR+MQ++G   N  T  + L AC  S    +G EIH    +  +   +    AL+ MYA
Sbjct: 302 MFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYA 361

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +CG +  +  V   +  KD V+WN+M+     +    +A+  F ++  +  +P+ V    
Sbjct: 362 KCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTG 421

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL-------MDMYAKCCCVNYMGRVF 319
            +S              H+  +++G    +QI N++        D     C V+   R  
Sbjct: 422 VLSGCS-----------HSRLVEEG----VQIFNSMGRDHLVEPDANHYSCVVDIYSRAG 466

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
               A  FI    +    +     L A  +++ V+L  + A
Sbjct: 467 RLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISA 507



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 42/274 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAY--------------------------- 33
           +Y KC SV +A  +FD +  R V +WN +L AY                           
Sbjct: 223 LYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEAT 282

Query: 34  --------VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
                   + NG     +E + +M+ +G   +  T   ++ AC+  ++L  G +IH  V 
Sbjct: 283 WNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVF 342

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
           +           +L+ MYAKC D   +R +FD M  ++DVV WN++I A +  G   EAL
Sbjct: 343 RHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM-RRKDVVAWNTMIIANAMHGNGKEAL 401

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN---ALI 202
            LF +M    +  N+ TF   L  C  S     G++I  +  +   +L    AN    ++
Sbjct: 402 FLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGR--DHLVEPDANHYSCVV 459

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
            +Y+R G++ EA   +  +  + + S W ++L  
Sbjct: 460 DIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/787 (35%), Positives = 443/787 (56%), Gaps = 22/787 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGY-----DSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           ++ AC+ L+ L  G ++HGLV++             + N ++ MY +C     A  +FDR
Sbjct: 16  ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL--QACEDSSFE 176
           M + ++VV W S+ISA++ +G   +A+ LFR+M   G+  +  TF + L   +  + + +
Sbjct: 76  M-KDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLD 134

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G  +H+  +++G      V N ++ MY +CG + +A  V   +++ +  SW  ++  +
Sbjct: 135 E-GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSD 295
            QN    + ++    +  AG KPD       + A   +G L   K LHA  I   G   D
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             +G  L+++Y KC  +     VF Q+  +D +SW+++IA +AQ+     A++L   + L
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDL 313

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDY 414
           EG+  + +   +VL A + LK     KEIH  I++ G SD V L +A+V +Y   G ++ 
Sbjct: 314 EGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVET 373

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R++FES   +DVVSW+SMI+ Y  N     AL LF  M    V+ +S+T VSA+ A + 
Sbjct: 374 ARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAG 433

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           +  L++G +L+  +   G + +  VA++LV++Y +CG L+ A  VF  ++ K+L+ WTS+
Sbjct: 434 VGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSI 493

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
             A G +G G  ++ L + ME +   PD I F+A+L +C+++G +++G  +  +M  D+ 
Sbjct: 494 AMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFG 553

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  EH  C+VD+LGRA  LE A Q + +M+ E ++  W  LL AC+ H++       A
Sbjct: 554 IAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFE-SSLAWMMLLTACKAHNDTARAARAA 612

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           +K+ +L+P N   YVL+S+VF A+  W+  E+ R RM G G+++  G S IEIG+++H F
Sbjct: 613 EKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEF 672

Query: 715 IARDK--SHSESDEIYKKLAEITEKLERE---GGYVAQTQFV-LHNVEEEEKVQMLYGHS 768
           +A      H    EI+  L    EKL RE    GYV     V L +VEE  K   +  HS
Sbjct: 673 VAASDVLPHHLVGEIFAAL----EKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHS 728

Query: 769 ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
           E LA+  G++ +  G+ +RITKNLR+C DCH   K VS+L  R + VRD  R HHFE GV
Sbjct: 729 EMLALGLGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFENGV 788

Query: 829 CSCGDYW 835
           CSCGDYW
Sbjct: 789 CSCGDYW 795



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 166/569 (29%), Positives = 299/569 (52%), Gaps = 10/569 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG    A  +FD++  + V  W +++ A+   G     +  + +M + G+S D  T
Sbjct: 59  MYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRIT 118

Query: 61  FPCV-IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  + +K     ++LD G ++H  +++ GY+    ++N +V MY KC D  +A  +FD +
Sbjct: 119 FTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSI 178

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +  +V  W  II+AY+ +G C+E L L   M + G+  + YTF   L AC         
Sbjct: 179 -QDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEA 237

Query: 180 MEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
             +HAAT+ S G +    V  ALI +Y +CG + EA GV  Q++NKD VSW+SM+  F Q
Sbjct: 238 KILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQ 297

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A+Q    +   G +P+ V  VN + A   L     GKE+HA  ++ G+  D+ +
Sbjct: 298 SGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCL 357

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            + L+ MY     V     +F     +D +SW+++IAGY+QN    +AL LFR ++++G+
Sbjct: 358 TSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGV 417

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             + +   S + AC+G+  + +  ++H  +   GL  D+ +  A+V++YGKCG ++ +  
Sbjct: 418 QPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEA 477

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  ++ K++++WTS+  +Y  NG  + +L+L + M    ++ D I  V+ L + +    
Sbjct: 478 VFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQ 537

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           + KG      + +  F +  +V     +VD+  R G L+ A ++ N ++ +  + W  ++
Sbjct: 538 MSKGLHYYNLMTQD-FGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLL 596

Query: 536 NANGLH---GRGKVAIDLFYKMEAESFAP 561
            A   H    R   A +  +++E ++  P
Sbjct: 597 TACKAHNDTARAARAAEKIFQLEPKNATP 625



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 244/484 (50%), Gaps = 16/484 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG V  A  +FD +    VF+W  ++ AY  NG  + VL   SRM   G+  D +T
Sbjct: 161 MYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYT 220

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVL-KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC  +  L+    +H   +   G D    +  +L+ +Y KC    +A  +F ++
Sbjct: 221 FTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQI 280

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K D+V W+S+I+A++ SGQ   A+ L   M   G+  N  TFV  L+A         G
Sbjct: 281 DNK-DIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYG 339

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            EIHA  V++G +  V + +AL+ MY   G +  A  +      +D VSW+SM+ G+ QN
Sbjct: 340 KEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQN 399

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +   +A+  FRE++  G +P+ V  V+A+ A   +G L  G +LH      G   D+ + 
Sbjct: 400 ESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVA 459

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+++Y KC  +     VF  M  ++ ++WT+I   Y QN    ++L+L   ++L+G+ 
Sbjct: 460 TALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMK 519

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI------VDVYGKCGNID 413
            D ++  ++L++C+    MS  K +H Y +     D  I  A+      VD+ G+ G ++
Sbjct: 520 PDGIVFVAILVSCNYAGQMS--KGLHYYNLMT--QDFGIAPAVEHCGCMVDILGRAGKLE 575

Query: 414 YSRNVFESIESKDVVSWTSMISS-YVHNGLAN--EALELFYLMNEANVESDSITLVSALS 470
            +  +  +++ +  ++W  ++++   HN  A    A E  + +   N  +  + L S   
Sbjct: 576 AAEQLINTMKFESSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKNA-TPYVLLSSVFC 634

Query: 471 AASS 474
           AA S
Sbjct: 635 AAGS 638



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 191/387 (49%), Gaps = 8/387 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGKCG++ +A  +F ++  + + +W++M+ A+  +G+    ++    M + G+  +  T
Sbjct: 263 LYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVT 322

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V++A   LK    G +IH  +++ GY     + ++LV MY        AR +F+   
Sbjct: 323 FVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSR 382

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DVV W+S+I+ YS +     AL LFREM+  G+  N+ TFV+A+ AC        G 
Sbjct: 383 ER-DVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGT 441

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H      G +  V VA AL+ +Y +CG++ EA  V   ++ K+ ++W S+   + QN 
Sbjct: 442 QLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNG 501

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ---GFVSDLQ 297
              ++++    ++  G KPD +  V  + +    G +  G  LH Y +     G    ++
Sbjct: 502 HGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKG--LHYYNLMTQDFGIAPAVE 559

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII-AGYAQNNCHLKALELFRTVQLE 356
               ++D+  +   +    ++   M  +  ++W  ++ A  A N+    A    +  QLE
Sbjct: 560 HCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTACKAHNDTARAARAAEKIFQLE 619

Query: 357 GLDA-DVMIIGSVLMACSGLKCMSQTK 382
             +A   +++ SV  A    +   +T+
Sbjct: 620 PKNATPYVLLSSVFCAAGSWEAAEETR 646


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/675 (36%), Positives = 406/675 (60%), Gaps = 44/675 (6%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N +++ Y++ G ++    +   + N+D VSWNS+++G+V      +A++ +  +      
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMM----- 129

Query: 259 PDQVCTVNAVSASGRL------GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
            D V  +N ++ S  L      G +  G+++H   +K GF + + +G++L+DMYAK   V
Sbjct: 130 KDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLV 189

Query: 313 NYMG-------------------------------RVFYQMTAQDFISWTTIIAGYAQNN 341
           +                                  R+F+ M  +D ISWTT+I G  QN 
Sbjct: 190 SVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNG 249

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILN 400
              +A++LFR ++ EG+  D    GSVL AC GL+ + + KEIH  IIR G + ++ + +
Sbjct: 250 LEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGS 309

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A+VD+Y KC ++ Y+  VF+ + +K+VVSWT+M+  Y  NG + EA+ +F  M    +E 
Sbjct: 310 ALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEP 369

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D  TL S +S+ ++L+ L++G + +   +  G     +V+++L+ +Y +CG+++ +N++F
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLF 429

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
           + +  +D + WT++++     G+    IDLF +M  +   PD +TF+A+L ACS +GL+ 
Sbjct: 430 DEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVE 489

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            G+++ E M  D+ + P+ +HY C++DL GRA  LEEA  F+  M   P +  W  LL +
Sbjct: 490 RGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSS 549

Query: 641 CRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTP 700
           CR++ N+E+G+  A+ LLELDP NP  Y+L+S+++AA  KW +V Q+R  MR  G +K P
Sbjct: 550 CRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEP 609

Query: 701 GSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEK 760
           G SWI+  +K++ F A D+S   SD+IY +L ++  K+  E GYV     VLH+VE+ EK
Sbjct: 610 GFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEE-GYVPDASSVLHDVEDSEK 668

Query: 761 VQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANR 820
           ++ML  HSE+LAIA+G+L    G  IR+ KNLRVC DCH+  K +S++  RE++VRDA R
Sbjct: 669 MKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVR 728

Query: 821 FHHFEAGVCSCGDYW 835
           FH F+ G CSCGD+W
Sbjct: 729 FHLFKDGTCSCGDFW 743



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 159/575 (27%), Positives = 283/575 (49%), Gaps = 70/575 (12%)

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK--- 122
           K C   ++     K+H L++K   +   F+ N+L+  Y+K  +   AR +FD+M +    
Sbjct: 13  KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72

Query: 123 ---------------------------EDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
                                       D V WNS+IS Y   G  +EA+  +  M + G
Sbjct: 73  SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132

Query: 156 LVT-NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEA 214
           ++  N  TF   L          LG +IH   VK G    V+V ++L+ MYA+ G ++ A
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192

Query: 215 AGV-------------------------------LYQLENKDSVSWNSMLTGFVQNDLYC 243
           + V                                + ++ +DS+SW +M+TG +QN L  
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +AM  FR+++  G   DQ    + ++A G L  L  GKE+H   I+ G+  ++ +G+ L+
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMY KC  V Y   VF +M  ++ +SWT ++ GY QN    +A+ +F  +Q  G++ D  
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            +GSV+ +C+ L  + +  + H   +  GL S + + NA++ +YGKCG+I+ S  +F+ +
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             +D VSWT+++S Y   G ANE ++LF  M    ++ D++T ++ LSA S   ++++G+
Sbjct: 433 SFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQ 492

Query: 483 E-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGL 540
           +     +   G        + ++D++ R G L+ A    N +  + D I W +++++  L
Sbjct: 493 QYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRL 552

Query: 541 HGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +G    GK A +   +++ ++  P     L+ +YA
Sbjct: 553 YGNEEIGKWAAESLLELDPQN--PAGYILLSSIYA 585



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 265/539 (49%), Gaps = 56/539 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGI-SVDAFT 60
           Y K G +   +++F  +  R   +WN+++  YV  G  +  ++TY+ M   G+ +++  T
Sbjct: 81  YSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRIT 140

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++   +    +D G +IHG ++K G+ +  F+ +SLV MYAK      A Q+FD + 
Sbjct: 141 FSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQ 200

Query: 121 EK------------------------------EDVVLWNSIISAYSASGQCLEALGLFRE 150
           E+                               D + W ++I+    +G   EA+ LFR+
Sbjct: 201 ERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRD 260

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M++ G+  + YTF + L AC        G EIH   ++SG N  V+V +AL+ MY +C  
Sbjct: 261 MRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRS 320

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           +  A  V  ++ NK+ VSW +ML G+ QN    +A++ F ++Q  G +PD     + +S+
Sbjct: 321 VRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISS 380

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
              L +L  G + H  A+  G +S + + N L+ +Y KC  +    ++F +M+ +D +SW
Sbjct: 381 CANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSW 440

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKE 383
           T +++GYAQ     + ++LF  + ++GL  D +   +VL ACS       G +      +
Sbjct: 441 TALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLK 500

Query: 384 IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS---YVH 439
            HG I     SD      ++D++G+ G ++ ++N    +  S D + W +++SS   Y +
Sbjct: 501 DHGII---PFSDH--YTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGN 555

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
             +   A E    ++  N       L+S++ AA       KGK  N   +R+G   +G+
Sbjct: 556 EEIGKWAAESLLELDPQN--PAGYILLSSIYAA-------KGKWSNVAQLRRGMREKGA 605



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 120/236 (50%), Gaps = 3/236 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC SV  AE +F +++ + V +W AML  Y  NG     +  +  M+  GI  D FT
Sbjct: 314 MYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFT 373

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +CA L  L+ GA+ H   L  G  S   + N+L+ +Y KC     + QLFD M 
Sbjct: 374 LGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMS 433

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +++V  W +++S Y+  G+  E + LF  M   GL  +A TF+A L AC  +     G 
Sbjct: 434 FRDEVS-WTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQ 492

Query: 181 EIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
           +   + +K    +        +I ++ R G++ EA   + ++  + DS+ W ++L+
Sbjct: 493 QYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLS 548



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)

Query: 372 CSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFES--------- 421
           C   +  +Q K++H  II+   +    L N +++ Y K GNI Y+R+VF+          
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 422 ----------------------IESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANV 458
                                 + ++D VSW S+IS YV  G   EA++ +  +M +  +
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
             + IT  + L   SS   +  G++++G I++ GF     V SSLVDMYA+ G + +A++
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 519 VFNCVQTKDLIL-------------------------------WTSMINANGLHGRGKVA 547
           VF+ VQ +++++                               WT+MI     +G    A
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLV 606
           +DLF  M  E  A D  TF ++L AC     + EGK+    I+R  Y  + +    + LV
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVG--SALV 312

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           D+  +   +  A    + M  +     W A+L
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVS-WTAML 343


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 255/657 (38%), Positives = 399/657 (60%), Gaps = 6/657 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG-FVQN 239
            +HA  + S       +++ L A YAR G +  A   L       S++  + +     + 
Sbjct: 29  RLHALLIVSSSATHTLISS-LAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRR 87

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A++ FR L  A  +PD      A+SA  RLG+L  G+ +   A   G+  D+ + 
Sbjct: 88  GSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVC 146

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           ++L+ +YA+   +    +VF +M  +D ++W+T++AG+      L A++++R ++ +G+ 
Sbjct: 147 SSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVK 206

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            D +++  V+ AC+  + +     +HG+++R G+  D+V   ++VD+Y K G +D +  V
Sbjct: 207 GDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRV 266

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  +  ++ VSW++MIS +  NG ++EAL LF  M  + ++ DS  LVSAL A S++  L
Sbjct: 267 FGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFL 326

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           K G+ ++GFI+R+ F+    + ++ +DMY++CG+L  A  +FN +  +DLILW +MI   
Sbjct: 327 KLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACC 385

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
           G HGRG+ A+ LF +M      PDH TF +LL A SHSGL+ EGK +   M   +++ P 
Sbjct: 386 GAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPA 445

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            +HY CLVDLL R+  +EEA   + SM+ EPT  +W ALL  C  +   ELGE +A  +L
Sbjct: 446 EKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNIL 505

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           EL P + G   L+SN++AA++KW  V QVR  M+ SG KK PG S IEI    H+F+  D
Sbjct: 506 ELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMED 565

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           +SH + +EI  K+A++  ++ R+ GY+ +T+FV H++EEE K Q L  HSE+LAIA+G+L
Sbjct: 566 QSHPQREEIVSKVAKLDLEM-RKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLL 624

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +  G+ + I KNLRVC DCH   K +S++  RE+VVRDA RFHHF+ GVCSC DYW
Sbjct: 625 NTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 255/503 (50%), Gaps = 11/503 (2%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           A++H L++     +T  +++SL A YA+  D   A            +  WN+II+A+S 
Sbjct: 28  ARLHALLI-VSSSATHTLISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSR 86

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
            G    AL +FR +       ++ TF  AL AC        G  +      +G    V+V
Sbjct: 87  RGSPASALRVFRALPPAAR-PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFV 145

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
            ++L+ +YAR G M +A  V  ++  +D V+W++M+ GFV       A+Q +R ++  G 
Sbjct: 146 CSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGV 205

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           K D+V  +  + A     N+  G  +H + ++ G   D+    +L+DMYAK   ++   R
Sbjct: 206 KGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACR 265

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF  M  ++ +SW+ +I+G+AQN    +AL LFR +Q  G+  D   + S L+ACS +  
Sbjct: 266 VFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGF 325

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
           +   + +HG+I+R+   + ++  A +D+Y KCG++  ++ +F  I  +D++ W +MI+  
Sbjct: 326 LKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACC 385

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             +G   +AL LF  MNE  +  D  T  S LSA S   ++++GK   G ++   F +  
Sbjct: 386 GAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNH-FKITP 444

Query: 498 SVAS--SLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGRGKVAIDLFYKM 554
           +      LVD+ AR G ++ A+ +   ++ +  + +W +++  +G     K+ +      
Sbjct: 445 AEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALL--SGCLNNKKLELGESIAD 502

Query: 555 EAESFAPDHITFLAL---LYACS 574
                 PD +  LAL   LYA +
Sbjct: 503 NILELQPDDVGVLALVSNLYAAT 525



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 214/428 (50%), Gaps = 21/428 (4%)

Query: 36  NGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI 95
            G P   L  + R        D+ TF   + ACA L DL  G  +       GY    F+
Sbjct: 87  RGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFV 145

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            +SL+ +YA+      A ++FDRM  + D V W+++++ + ++GQ L+A+ ++R M+  G
Sbjct: 146 CSSLLHLYARWGAMGDAVKVFDRM-PRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG 204

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           +  +    +  +QAC  +    +G  +H   ++ G  + V  A +L+ MYA+ G +  A 
Sbjct: 205 VKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVAC 264

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            V   + +++ VSW++M++GF QN    +A++ FR +Q +G +PD    V+A+ A   +G
Sbjct: 265 RVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIG 324

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            L  G+ +H + +++ F  +  +G   +DMY+KC  +     +F  ++ +D I W  +IA
Sbjct: 325 FLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIA 383

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
               +     AL LF+ +   G+  D     S+L A S    + + K   G ++    + 
Sbjct: 384 CCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMV----NH 439

Query: 396 LVILNA------IVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISSYVHN-------G 441
             I  A      +VD+  + G ++ + ++  S++++  V+ W +++S  ++N        
Sbjct: 440 FKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGES 499

Query: 442 LANEALEL 449
           +A+  LEL
Sbjct: 500 IADNILEL 507



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 188/380 (49%), Gaps = 13/380 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G++ DA ++FD++ +R   TW+ M+  +VS G+PL  ++ Y RMR  G+  D   
Sbjct: 152 LYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVV 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI+AC   +++  GA +HG +L+ G         SLV MYAK      A ++F  M 
Sbjct: 212 MIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMV 271

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DV  W+++IS ++ +GQ  EAL LFR MQ  G+  ++   V+AL AC +  F  LG 
Sbjct: 272 HRNDVS-WSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGR 330

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   V+   +    +  A I MY++CG +  A  +   + ++D + WN+M+     + 
Sbjct: 331 SVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHG 389

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+  F+E+   G +PD     + +SA    G +  GK      +    ++  +   
Sbjct: 390 RGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHY 449

Query: 301 T-LMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAGYAQNNCHLKALELFRTV----- 353
             L+D+ A+   V     +   M A+  ++ W  +++G   N    K LEL  ++     
Sbjct: 450 VCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNN----KKLELGESIADNIL 505

Query: 354 QLEGLDADVMIIGSVLMACS 373
           +L+  D  V+ + S L A +
Sbjct: 506 ELQPDDVGVLALVSNLYAAT 525


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 263/739 (35%), Positives = 415/739 (56%), Gaps = 7/739 (0%)

Query: 10  DAEQLFDKVSQRTV---FTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV--DAFTFPCV 64
           DA  +F  + +        WN ++  +   G     +  Y +M     S   D  T P V
Sbjct: 94  DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYV 153

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           +K+CA L  L  G  +H      G D   ++ ++L+ MYA       AR++FD M E+ D
Sbjct: 154 VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDER-D 212

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
            VLWN ++  Y  +G    A+GLFR M+  G   N  T    L  C   +    G+++H 
Sbjct: 213 CVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHT 272

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             VK G   +V VAN L++MYA+C  + EA  +   +   D V+WN M++G VQN L   
Sbjct: 273 LAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDD 332

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A++ F ++Q +G +PD V   + + A   L     GKE+H Y ++     D+ + + L+D
Sbjct: 333 ALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVD 392

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +Y KC  V     VF    + D +  +T+I+GY  N     A+++FR +   G+  + ++
Sbjct: 393 IYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVM 452

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + S L AC+ +  M   +E+HGY+++        + +A++D+Y KCG +D S  +F  + 
Sbjct: 453 VASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMS 512

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
           +KD V+W SMISS+  NG   EAL+LF  M    V+ +++T+ S LSA + L  +  GKE
Sbjct: 513 AKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKE 572

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++G II+     +    S+L+DMY +CG L++A +VF  +  K+ + W S+I+A G HG 
Sbjct: 573 IHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGL 632

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
            K ++DL   M+ E F  DH+TFLAL+ AC+H+G + EG +    M  +Y ++P  EH +
Sbjct: 633 VKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLS 692

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C+VDL  RA  L++A QF+  M  +P A +W ALL ACRVH N EL EI +++L +LDP 
Sbjct: 693 CMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPH 752

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           N G YVL+SN+ A + +W  V ++R  M+   ++K PG SW+++ N  H F+A DK+H +
Sbjct: 753 NCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPD 812

Query: 724 SDEIYKKLAEITEKLEREG 742
           S+EIY  L  +  +L++EG
Sbjct: 813 SEEIYMSLKSLIIELKQEG 831



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 215/437 (49%), Gaps = 11/437 (2%)

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSG-----QNLQVYVANALIAMYARCGKMTEA 214
           AY  +A L+ C   S   LG+ IHA  V SG           +   L+ MY    +  +A
Sbjct: 36  AYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDA 95

Query: 215 AGVLYQLEN---KDSVSWNSMLTGFVQNDLYCKAMQFFREL--QGAGQKPDQVCTVNAVS 269
             V   L       ++ WN ++ GF     +  A+ F+ ++    +  +PD       V 
Sbjct: 96  VAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVK 155

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           +   LG L  G+ +H      G   D+ +G+ L+ MYA    ++    VF  M  +D + 
Sbjct: 156 SCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVL 215

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W  ++ GY +      A+ LFR ++  G D +   +   L  C+    +    ++H   +
Sbjct: 216 WNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAV 275

Query: 390 RKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           + GL  ++ + N +V +Y KC  ++ +  +F  +   D+V+W  MIS  V NGL ++AL 
Sbjct: 276 KYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALR 335

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           LF  M ++ ++ DS+TL S L A + L+  K+GKE++G+I+R   +++  + S+LVD+Y 
Sbjct: 336 LFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYF 395

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           +C  + +A  VF+  ++ D+++ ++MI+   L+   + A+ +F  + A    P+ +   +
Sbjct: 396 KCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVAS 455

Query: 569 LLYACSHSGLINEGKKF 585
            L AC+    +  G++ 
Sbjct: 456 TLPACASMAAMRIGQEL 472


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 263/766 (34%), Positives = 435/766 (56%), Gaps = 7/766 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR--TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY  CGS  +  ++F ++  R  ++  WN+++ ++V  G   + L  Y +M   G+S D 
Sbjct: 75  MYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDV 134

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            TFPC++KAC  LK+      +   V   G D  +F+ +SL+  Y +      A +LFDR
Sbjct: 135 STFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDR 194

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           + +K D V+WN +++ Y+  G     +  F  M+   +  NA TF   L  C       L
Sbjct: 195 VLQK-DCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDL 253

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G+++H   V SG + +  + N+L++MY++CG+  +A  +   +   D+V+WN M++G+VQ
Sbjct: 254 GVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQ 313

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           + L  +++ FF E+  +G  PD +   + + +  +  NL   +++H Y ++     D+ +
Sbjct: 314 SGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFL 373

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            + L+D Y KC  V+   ++F Q  + D + +T +I+GY  N  ++ ALE+FR +    +
Sbjct: 374 TSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKI 433

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRN 417
             + + + S+L    GL  +   +E+HG+II+KG  +   +  A++D+Y KCG ++ +  
Sbjct: 434 SPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 493

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  +  +D+VSW SMI+    +   + A+++F  M  + +  D +++ +ALSA ++L  
Sbjct: 494 IFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPS 553

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
              GK ++GF+I+    L+    S+L+DMYA+CG L  A  VF+ ++ K+++ W S+I A
Sbjct: 554 ESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAA 613

Query: 538 NGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
            G HG+ K ++ LF++M E     PD ITFL ++  C H G ++EG +F   M  DY + 
Sbjct: 614 YGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQ 673

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHYAC+VDL GRA  L EAY+ V+SM   P A VW  LLGA R+H N EL ++ + +
Sbjct: 674 PQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSR 733

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L++LDP N G YVLISN  A + +W+ V +VR  M+   ++K PG SWIEI    H F++
Sbjct: 734 LMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVS 793

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQ 762
            D +H ES  IY  L  + E+L  E GY+ Q    LH  E   KV 
Sbjct: 794 GDVNHPESSHIYSLLNSLLEELRLE-GYIPQPYLPLHP-ESSRKVN 837



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 172/584 (29%), Positives = 302/584 (51%), Gaps = 14/584 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK- 122
           +++ C+ L  L  G ++H  V+        +    ++ MYA C  F    ++F R+  + 
Sbjct: 37  LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED-SSFETLGME 181
             +  WNSIIS++   G   +AL  + +M   G+  +  TF   ++AC    +F+  G+E
Sbjct: 97  SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK--GIE 154

Query: 182 IHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             + TV S G +   +VA++LI  Y   GK+  A  +  ++  KD V WN ML G+ +  
Sbjct: 155 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCG 214

Query: 241 LYCKAMQFFRELQGAGQKPDQVC--TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                ++ F  ++     P+ V    V +V AS  L +L  G +LH   +  G   +  I
Sbjct: 215 ASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDL--GVQLHGLVVVSGLDFEGSI 272

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N+L+ MY+KC   +   ++F  M+  D ++W  +I+GY Q+    ++L  F  +   G+
Sbjct: 273 KNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGV 332

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D +   S+L + S  + +   ++IH YI+R  +S D+ + +A++D Y KC  +  ++ 
Sbjct: 333 LPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQK 392

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F    S DVV +T+MIS Y+HNGL  +ALE+F  + +  +  + ITLVS L     L  
Sbjct: 393 IFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLA 452

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           LK G+EL+GFII+KGF+   ++  +++DMYA+CG +++A ++F  +  +D++ W SMI  
Sbjct: 453 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITR 512

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM-RCDYQLD 596
                    AID+F +M       D ++  A L AC++    + GK     M +    LD
Sbjct: 513 CAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALD 572

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            + E  + L+D+  +  +L+ A     +M+ E     W +++ A
Sbjct: 573 VYSE--STLIDMYAKCGNLKAAMNVFDTMK-EKNIVSWNSIIAA 613


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/799 (33%), Positives = 445/799 (55%), Gaps = 35/799 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G VL A ++F+++S R   +W AML  Y  NG     L  Y +M   G+    + 
Sbjct: 86  LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYV 145

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +C   +    G  +H    K G+ S  F+ N+L+ +Y +C  FR A ++F  M 
Sbjct: 146 LSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMP 205

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V +N++IS ++       AL +F EMQ  GL  +  T  + L AC        G 
Sbjct: 206 HR-DTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGT 264

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTGFVQN 239
           ++H+   K+G +    +  +L+ +Y +CG + E A V++ L N+ +V  WN +L  F Q 
Sbjct: 265 QLHSYLFKAGMSSDYIMEGSLLDLYVKCGDV-ETALVIFNLGNRTNVVLWNLILVAFGQI 323

Query: 240 DLYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           +   K+ + F ++Q AG +P+Q    C +   + +G +     G+++H+ ++K GF SD+
Sbjct: 324 NDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDL---GEQIHSLSVKTGFESDM 380

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +   L+DMY+K   +    RV   +  +D +SWT++IAGY Q+     AL  F+ +Q  
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKC 440

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
           G+  D + + S +  C+G+K M Q  +IH  +   G S D+ I NA+V++Y +CG I  +
Sbjct: 441 GIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREA 500

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
            + FE IE KD ++W  ++S +  +GL  EAL++F  M+++ V+ +  T VSALSA+++L
Sbjct: 501 FSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           + +K+GK+++  +I+ G + E  V ++L+ +Y +CG+ + A   F+ +  ++ + W ++I
Sbjct: 561 AEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTII 620

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
            +   HGRG  A+D F +M+                         EG  + + M   Y +
Sbjct: 621 TSCSQHGRGLEALDFFDQMK------------------------KEGLSYFKSMSDKYGI 656

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
            P P+HYAC++D+ GRA  L+ A +FV  M I   A VW  LL AC+VH N E+GE+ AK
Sbjct: 657 RPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAK 716

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
            LLEL+P +  +YVL+SN +A + KW + +QVR  MR  G++K PG SWIE+ N +H+F 
Sbjct: 717 HLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFF 776

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
             D+ H  +++IY  LA I +++ +  GY  +   + H+ E+E +      HSE+LA+ +
Sbjct: 777 VGDRLHPLAEQIYNFLAVINDRVAKV-GYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTF 835

Query: 776 GVLKSTEGSLIRITKNLRV 794
           G++       +R+ KNLRV
Sbjct: 836 GLMSLPPCMPLRVIKNLRV 854



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 169/630 (26%), Positives = 315/630 (50%), Gaps = 7/630 (1%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKAC-AMLKDLDC 76
           +++R   +    L  +++  +P +VL  ++        +    F C ++AC    +    
Sbjct: 1   MTRRGAASLGWSLAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
             +IH   +  G      + N L+ +Y+K      AR++F+ +  +++V  W +++S Y+
Sbjct: 61  VPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVS-WVAMLSGYA 119

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +G   EAL L+R+M R G+V   Y   + L +C  +     G  +HA   K G   + +
Sbjct: 120 QNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETF 179

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V NALI +Y RCG    A  V Y + ++D+V++N++++G  Q      A++ F E+Q +G
Sbjct: 180 VGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSG 239

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             PD V   + ++A   LG+L  G +LH+Y  K G  SD  +  +L+D+Y KC  V    
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETAL 299

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            +F      + + W  I+  + Q N   K+ ELF  +Q  G+  +      +L  C+   
Sbjct: 300 VIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTG 359

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +   ++IH   ++ G  SD+ +   ++D+Y K G ++ +R V E ++ KDVVSWTSMI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            YV +    +AL  F  M +  +  D+I L SA+S  + +  +++G +++  +   G++ 
Sbjct: 420 GYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSG 479

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           + S+ ++LV++YARCG +  A   F  ++ KD I W  +++     G  + A+ +F +M+
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD 539

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANH 614
                 +  TF++ L A ++   I +GK+    +++  +  +   E    L+ L G+   
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFE--TEVGNALISLYGKCGS 597

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
            E+A      M  E     W  ++ +C  H
Sbjct: 598 FEDAKMEFSEMS-ERNEVSWNTIITSCSQH 626



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 160/614 (26%), Positives = 291/614 (47%), Gaps = 22/614 (3%)

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE-TLGMEIHAATVKSG 190
           ++ + A     + L LF +  R         F  AL+AC  +     +  EIHA  +  G
Sbjct: 13  LAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAITRG 72

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
                 V N LI +Y++ G +  A  V  +L  +D+VSW +ML+G+ QN L  +A+  +R
Sbjct: 73  LGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYR 132

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           ++  AG  P      + +S+  +      G+ +HA   KQGF S+  +GN L+ +Y +C 
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCG 192

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
                 RVFY M  +D +++ T+I+G+AQ      ALE+F  +Q  GL  D + I S+L 
Sbjct: 193 SFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLA 252

Query: 371 ACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC+ L  + +  ++H Y+ + G+ SD ++  +++D+Y KCG+++ +  +F      +VV 
Sbjct: 253 ACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVL 312

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           W  ++ ++       ++ ELF  M  A +  +  T    L   +    +  G++++   +
Sbjct: 313 WNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSV 372

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           + GF  +  V+  L+DMY++ G L+ A +V   ++ KD++ WTSMI     H   K A+ 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALA 432

Query: 550 LFYKMEAESFAPDHITFLALLYACS-----HSGLINEGKKFLEIMRCDYQLDPWPEHYAC 604
            F +M+     PD+I   + +  C+       GL    + ++     D  +      +  
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSI------WNA 486

Query: 605 LVDLLGRANHLEEAYQFVRSMQIEPTAEV-WCALLGACRVHSNKELGEIVAKKLLELD-P 662
           LV+L  R   + EA+      +IE   E+ W  L+      +   L E   K  + +D  
Sbjct: 487 LVNLYARCGRIREAFSSFE--EIEHKDEITWNGLVSG---FAQSGLHEEALKVFMRMDQS 541

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
           G   N     +  +AS    +++Q +     + + KT  S   E+GN + S   +  S  
Sbjct: 542 GVKHNVFTFVSALSASANLAEIKQGKQIH--ARVIKTGHSFETEVGNALISLYGKCGSFE 599

Query: 723 ESDEIYKKLAEITE 736
           ++   + +++E  E
Sbjct: 600 DAKMEFSEMSERNE 613


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 292/850 (34%), Positives = 476/850 (56%), Gaps = 42/850 (4%)

Query: 1   MYGKCGSVLD-AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KCG  L  A + FD V  +   +WN+++  Y   G+     + +  M+  G     +
Sbjct: 148 MYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEY 207

Query: 60  TF-PCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           TF   V  AC++ + D+    +I   + K G+ +  F+ + LV+ +AK      AR++F+
Sbjct: 208 TFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFN 267

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF-E 176
           +M E  + V  N ++          EA  LF +M  + +  +  ++V  L +  + S  E
Sbjct: 268 QM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAE 325

Query: 177 TLGM----EIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            +G+    E+H   + +G  +  V + N L+ MYA+CG + +A  V   +  KDSVSWNS
Sbjct: 326 EVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNS 385

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M+TG  QN  + +A++ ++ ++     P     ++++S+   L     G+++H  ++K G
Sbjct: 386 MITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLG 445

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL-KALELF 350
              ++ + N LM +YA+  C+N   ++F  M   D +SW +II   A +   L +A+  F
Sbjct: 446 IDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACF 505

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKC 409
                 G   + +   SVL A S L      K+IHG  ++  ++D     NA++  YGKC
Sbjct: 506 LNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKC 565

Query: 410 GNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           G +D    +F  + E +D V+W SMIS Y+HN L  +AL+L + M +     DS    + 
Sbjct: 566 GEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATV 625

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           LSA +S++ L++G E++   +R     +  V S+LVDMY++CG LD A + FN +     
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP---- 681

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
            L+ +M                  K++ ++  PDH+TF+ +L ACSH+GL+ EG K  E 
Sbjct: 682 -LFANM------------------KLDGQT-PPDHVTFVGVLSACSHAGLLEEGFKHFES 721

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA-CRVHSNK 647
           M   Y L P  EH++C+ DLLGRA  L++   F+  M ++P   +W  +LGA CR +  K
Sbjct: 722 MSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRK 781

Query: 648 -ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            ELG+  A+ L +L+P N  NYVL+ N++AA  +W+D+ + R +M+ + +KK  G SW+ 
Sbjct: 782 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 841

Query: 707 IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
           + + +H F+A DKSH ++D IYKKL E+  K+ R+ GYV QT F L+++E+E K ++L  
Sbjct: 842 MKDGVHMFVAGDKSHPDADVIYKKLKELNRKM-RDAGYVPQTGFALYDLEQENKEEILSY 900

Query: 767 HSERLAIAYGVLKSTEGSL-IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
           HSE+LA+A+ +      +L IRI KNLRVC DCHS  K +S++ GR++++RD+NRFHHF+
Sbjct: 901 HSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKHISKIEGRQIILRDSNRFHHFQ 960

Query: 826 AGVCSCGDYW 835
            G CSC D+W
Sbjct: 961 DGECSCSDFW 970



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 181/666 (27%), Positives = 323/666 (48%), Gaps = 31/666 (4%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G  + A ++FD++  R   +W  ++  Y  NGE    L     M   G+  + + F
Sbjct: 46  YLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAF 105

Query: 62  PCVIKACAMLKDLDC--GAKIHGLVLKCGYDSTDFIVNSLVAMYAKC-YDFRKARQLFDR 118
              ++AC  L  +    G +IHGL+ K  Y     + N L++MY KC      A + FD 
Sbjct: 106 VSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDD 165

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL-QACEDSSFET 177
           +  K  V  WNSIIS YS +G    A  +F  MQ  G     YTF + +  AC  +  + 
Sbjct: 166 VQVKNSVS-WNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDV 224

Query: 178 LGMEIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             +E    T+ KSG    ++V + L++ +A+ G +  A  +  Q+E +++V+ N ++ G 
Sbjct: 225 RLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGL 284

Query: 237 VQNDLYCKAMQFFRELQGA-GQKPDQ----VCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           V+     +A + F ++       P+     + +    S +  +G L  G+E+H + I  G
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTG 343

Query: 292 FVSDL-QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
            V  +  IGN L++MYAKC  +    RVF  MT +D +SW ++I G  QN+C ++A+E +
Sbjct: 344 LVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERY 403

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
           ++++   +      + S + +C+ LK     ++IHG  ++ G+  ++ + NA++ +Y + 
Sbjct: 404 QSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA-NEALELFYLMNEANVESDSITLVSA 468
           G ++  R +F S+   D VSW S+I +   +  +  EA+  F     A  + + IT  S 
Sbjct: 464 GCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSV 523

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKD 527
           LSA SSLS  + GK+++G  ++     E +  ++L+  Y +CG +D   K+F+ + + +D
Sbjct: 524 LSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRD 583

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
            + W SMI+    +     A+DL + M       D   +  +L A +    +  G   +E
Sbjct: 584 DVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERG---ME 640

Query: 588 IMRCDYQ--LDPWPEHYACLVDLLGRANHLEEAYQFVRSM----------QIEPTAEVWC 635
           +  C  +  L+      + LVD+  +   L+ A +F  +M          Q  P    + 
Sbjct: 641 VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPLFANMKLDGQTPPDHVTFV 700

Query: 636 ALLGAC 641
            +L AC
Sbjct: 701 GVLSAC 706



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 144/479 (30%), Positives = 253/479 (52%), Gaps = 32/479 (6%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
            H  + K G +   ++ N+L+  Y +  D   AR++FD M  + + V W  ++S YS +G
Sbjct: 23  FHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLR-NCVSWACVVSGYSRNG 81

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACE--DSSFETLGMEIHAATVKSGQNLQVYV 197
           +  EAL   R+M + G+ +N Y FV+AL+AC+  DS     G +IH    K    +   V
Sbjct: 82  EHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVV 141

Query: 198 ANALIAMYARC-GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           +N LI+MY +C G +  A      ++ K+SVSWNS+++ + Q      A + F  +Q  G
Sbjct: 142 SNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDG 201

Query: 257 QKPDQVCTVNAVSASGRL--GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            +P +    + V+ +  L   ++   +++     K GF++DL +G+ L+  +AK   + +
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIH 261

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS----VLM 370
             ++F QM  ++ ++   ++ G  +     +A +LF       +D + MI  S    V++
Sbjct: 262 ARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF-------MDMNSMIDVSPESYVIL 314

Query: 371 ACS----------GLKCMSQTKEIHGYIIRKGLSDLV--ILNAIVDVYGKCGNIDYSRNV 418
             S          GLK   + +E+HG++I  GL D +  I N +V++Y KCG+I  +R V
Sbjct: 315 LSSFPEYSLAEEVGLK---KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  +  KD VSW SMI+    N    EA+E +  M    +   S TL+S++S+ +SL   
Sbjct: 372 FCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWA 431

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           K G++++G  ++ G +L  SV+++L+ +YA  G L+   K+F+ +   D + W S+I A
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGA 490



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 20/321 (6%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           S + +C G +     K  H  + + GL  D+ + N +++ Y + G+   +R VF+ +  +
Sbjct: 8   SFVQSCIGHR--GAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK--GKE 483
           + VSW  ++S Y  NG   EAL     M +  V S+    VSAL A   L  +    G++
Sbjct: 66  NCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQ 125

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARC-GALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           ++G + +  + ++  V++ L+ MY +C G+L  A + F+ VQ K+ + W S+I+     G
Sbjct: 126 IHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTG 185

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALL-YACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
             + A  +FY M+ +   P   TF +L+  ACS   L     + LE + C  Q   +   
Sbjct: 186 DQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGFLTD 242

Query: 602 Y---ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
               + LV    ++  L  A +    M+      +   ++G  R    ++ GE   K  +
Sbjct: 243 LFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVR----QKWGEEATKLFM 298

Query: 659 ELDPG---NPGNYVLISNVFA 676
           +++     +P +YV++ + F 
Sbjct: 299 DMNSMIDVSPESYVILLSSFP 319


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/564 (42%), Positives = 362/564 (64%), Gaps = 3/564 (0%)

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           R  N+ + +++HA+ +  G + DL I N L+  YA+   ++    +F  +T +D  +W+ 
Sbjct: 12  RCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSV 71

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           ++ G+A+   H      FR +   G+  D   +  V+  C     +   + IH  +++ G
Sbjct: 72  MVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHG 131

Query: 393 L-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
           L SD  +  ++VD+Y KC  ++ ++ +FE + SKD+V+WT MI +Y     A E+L LF 
Sbjct: 132 LLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFD 190

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
            M E  V  D + +V+ ++A + L  + + +  N +I+R GF+L+  + ++++DMYA+CG
Sbjct: 191 RMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCG 250

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
           +++ A +VF+ ++ K++I W++MI A G HGRGK AIDLF+ M + +  P+ +TF++LLY
Sbjct: 251 SVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLY 310

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           ACSH+GLI EG +F   M  ++ + P  +HY C+VDLLGRA  L+EA + + +M +E   
Sbjct: 311 ACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDE 370

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
            +W ALLGACR+HS  EL E  A  LLEL P NPG+YVL+SN++A + KW+ V + R  M
Sbjct: 371 RLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMM 430

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
               LKK PG +WIE+ NK + F   D+SH +S EIY+ L  + +KLE   GYV  T FV
Sbjct: 431 TQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEM-AGYVPDTDFV 489

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           L +VEEE K +MLY HSE+LAIA+G++   EG  IRI+KNLRVC DCH+F K+VS +  R
Sbjct: 490 LQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRR 549

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
            ++VRDANRFHHF  G CSCGDYW
Sbjct: 550 SIIVRDANRFHHFNDGTCSCGDYW 573



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 223/413 (53%), Gaps = 7/413 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  V +G    + +AN L+  YA+   + +A  +   L  +DS +W+ M+ GF +  
Sbjct: 21  QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAG 80

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +      FREL   G  PD       +       +L  G+ +H   +K G +SD  +  
Sbjct: 81  DHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCA 140

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMYAKC  V    R+F +M ++D ++WT +I  YA  N + ++L LF  ++ EG+  
Sbjct: 141 SLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAY-ESLVLFDRMREEGVVP 199

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D + + +V+ AC+ L  M + +  + YI+R G S D+++  A++D+Y KCG+++ +R VF
Sbjct: 200 DKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVF 259

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + ++ K+V+SW++MI++Y ++G   +A++LF++M    +  + +T VS L A S   +++
Sbjct: 260 DRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIE 319

Query: 480 KG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMINA 537
           +G +  N          +    + +VD+  R G LD A ++   +   KD  LW++++ A
Sbjct: 320 EGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGA 379

Query: 538 NGLHGRGKVAIDLFYK-MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
             +H + ++A       +E +   P H   L+ +YA   +G   +  KF ++M
Sbjct: 380 CRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYA--KAGKWEKVAKFRDMM 430



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 139/279 (49%), Gaps = 2/279 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y +  ++ DA  LFD ++ R   TW+ M+G +   G+      T+  +   G++ D +T 
Sbjct: 45  YAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTL 104

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P VI+ C    DL  G  IH +VLK G  S  F+  SLV MYAKC     A++LF+RM  
Sbjct: 105 PFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLS 164

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D+V W  +I AY A     E+L LF  M+  G+V +    V  + AC           
Sbjct: 165 K-DLVTWTVMIGAY-ADCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARF 222

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            +   V++G +L V +  A+I MYA+CG +  A  V  +++ K+ +SW++M+  +  +  
Sbjct: 223 ANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGR 282

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
              A+  F  +      P++V  V+ + A    G +  G
Sbjct: 283 GKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEG 321



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 4/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  V DA++LF+++  + + TW  M+GAY ++      L  + RMR  G+  D   
Sbjct: 145 MYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAY-ADCNAYESLVLFDRMREEGVVPDKVA 203

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA L  +      +  +++ G+     +  +++ MYAKC     AR++FDRM 
Sbjct: 204 MVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMK 263

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK +V+ W+++I+AY   G+  +A+ LF  M    ++ N  TFV+ L AC  +     G+
Sbjct: 264 EK-NVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGL 322

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
              ++   +      V     ++ +  R G++ EA  ++  +   KD   W+++L
Sbjct: 323 RFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV  A ++FD++ ++ V +W+AM+ AY  +G     ++ +  M    I  +  T
Sbjct: 245 MYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVT 304

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI-VNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC+    ++ G +    + +      D      +V +  +     +A +L + M
Sbjct: 305 FVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAM 364

Query: 120 GEKEDVVLWNSIISA 134
             ++D  LW++++ A
Sbjct: 365 TVEKDERLWSALLGA 379


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/771 (35%), Positives = 437/771 (56%), Gaps = 19/771 (2%)

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           DL  G  +H  +L+      D +V NSL+ +Y++C     AR +FD M    D+V W ++
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC-EDSSFETLGMEIHAATVKSG 190
            S  + +G    +L L  EM   GL+ NAYT  AA  AC     +  +G  +     K G
Sbjct: 123 ASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMG 182

Query: 191 -QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
                V V +ALI M AR G +  A  V   L  K  V W  +++ +VQ +   +A++ F
Sbjct: 183 LWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELF 242

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            +    G +PD+    + +SA   LG++  G +LH+ A++ G  SD  +   L+DMYAK 
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKS 302

Query: 310 C---CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL-KALELFRTVQLEGLDADVMII 365
                ++Y  +VF +M   D ISWT +I+GY Q+     K + LF  +  E +  + +  
Sbjct: 303 NIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITY 362

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIES 424
            S+L +C+ +      +++H ++I+    S   + NA+V +Y + G ++ +R VF  +  
Sbjct: 363 SSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYE 422

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           + ++   +                L + +   +V   S T  S +SAA+S+ +L KG++L
Sbjct: 423 RSMIPCIT----------EGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQL 472

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +   ++ GF  +  V++SLV MY+RCG L+ A + FN ++ +++I WTSMI+    HG  
Sbjct: 473 HAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYA 532

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC 604
           + A+ LF+ M      P+ +T++A+L ACSH GL+ EGK++   M+ D+ L P  EHYAC
Sbjct: 533 ERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC 592

Query: 605 LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGN 664
           +VDLL R+  ++EA +F+  M ++  A VW  LLGACR H N E+GEI AK ++EL+P +
Sbjct: 593 MVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRD 652

Query: 665 PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSES 724
           P  YVL+SN++A +  W +V ++R  MR + L K  G SW+E+ N  H F A D SH  +
Sbjct: 653 PAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRA 712

Query: 725 DEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGS 784
            +IY KL  +  ++ +  GYV  T  VLH++ +E K Q L  HSE++A+A+G++ ++   
Sbjct: 713 QDIYGKLDTLVRQI-KGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPK 771

Query: 785 LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            IRI KNLRVC DCHS  K +S+   RE+++RD+NRFH  + G CSCG+YW
Sbjct: 772 PIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 167/604 (27%), Positives = 293/604 (48%), Gaps = 30/604 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           +Y +CG+V  A  +FD +   R + +W AM      NG     L     M   G+  +A+
Sbjct: 93  LYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLESGLLPNAY 152

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVL--KCGYDSTDFIVNS-LVAMYAKCYDFRKARQLF 116
           T      AC    +L C      L L  K G   TD  V S L+ M A+  D   AR++F
Sbjct: 153 TLCAAAHAC-FPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARNGDLASARKVF 211

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCL-EALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           D + EK  VV+W  +IS Y   G+C  EA+ LF +    G   + YT  + + AC +   
Sbjct: 212 DGLIEKT-VVVWTLLISRY-VQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGS 269

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCG---KMTEAAGVLYQLENKDSVSWNSM 232
             LG+++H+  ++ G      V+  L+ MYA+      M  A  V  ++   D +SW ++
Sbjct: 270 VRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTAL 329

Query: 233 LTGFVQNDLY-CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++G+VQ+ +   K M  F E+     KP+ +   + + +   + +  +G+++HA+ IK  
Sbjct: 330 ISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSN 389

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
             S   +GN L+ MYA+  C+    RVF Q+  +  I   T    +  ++         R
Sbjct: 390 QASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDH---------R 440

Query: 352 TVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKC 409
            V+++ G+ +      S++ A + +  +++ +++H   ++ G  SD  + N++V +Y +C
Sbjct: 441 IVRMDVGISSST--FASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRC 498

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G ++ +   F  ++ ++V+SWTSMIS    +G A  AL LF+ M    V+ + +T ++ L
Sbjct: 499 GYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVL 558

Query: 470 SAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-D 527
           SA S + ++++GKE    + R  G        + +VD+ AR G +  A +  N +  K D
Sbjct: 559 SACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKAD 618

Query: 528 LILWTSMINANGLHGRGKVA-IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
            ++W +++ A   H   +V  I     +E E   P     L+ LYA   +GL +E  +  
Sbjct: 619 ALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYA--DAGLWDEVARIR 676

Query: 587 EIMR 590
             MR
Sbjct: 677 SAMR 680



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 232/506 (45%), Gaps = 58/506 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M  + G +  A ++FD + ++TV  W  ++  YV        +E +      G   D +T
Sbjct: 197 MLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYT 256

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK-----CYDFRKARQL 115
              +I AC  L  +  G ++H L L+ G  S   +   LV MYAK       D+  A ++
Sbjct: 257 MSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDY--ANKV 314

Query: 116 FDRMGEKEDVVLWNSIISAYSASG-QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           F+RM  K DV+ W ++IS Y  SG Q  + + LF EM    +  N  T+ + L++C   S
Sbjct: 315 FERM-PKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASIS 373

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G ++HA  +KS Q     V NAL++MYA  G M EA  V  QL  +      SM+ 
Sbjct: 374 DHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER------SMIP 427

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
              +   +    +  R   G           + +SA+  +G L  G++LHA ++K GF S
Sbjct: 428 CITEGRDFPLDHRIVRMDVGISSS----TFASLISAAASVGMLTKGQQLHAMSLKAGFGS 483

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D  + N+L+ MY++C  +    R F ++  ++ ISWT++I+G A++    +AL LF  + 
Sbjct: 484 DRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMI 543

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEI-------HGYIIRKG----LSDLVILNAIV 403
           L G+  + +   +VL ACS +  + + KE        HG I R      + DL+  + IV
Sbjct: 544 LTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIV 603

Query: 404 D--------------------VYGKCGNID-------YSRNVFESIESKDVVSWTSMISS 436
                                + G C + D        ++NV E +E +D   +  + + 
Sbjct: 604 KEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVE-LEPRDPAPYVLLSNL 662

Query: 437 YVHNGLANEALELFYLMNEANVESDS 462
           Y   GL +E   +   M + N+  ++
Sbjct: 663 YADAGLWDEVARIRSAMRDNNLNKET 688


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/837 (31%), Positives = 445/837 (53%), Gaps = 88/837 (10%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++K+C+ +++    + IH  ++         I + ++A      +   A Q+     E E
Sbjct: 41  LLKSCSNIREF---SPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            ++ WN+++      G   E L  +  M   G++ +  TF   + AC  +    LG E+H
Sbjct: 98  SII-WNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVH 156

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              +K G      + N L+ +Y++CGK+ E   +  ++ ++D +SWN+M++ +V   +Y 
Sbjct: 157 GRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYR 216

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+  F E+  +G  PD++  V+ VS   +L +L  GK LH Y +         + N L+
Sbjct: 217 EALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLV 276

Query: 304 DMYAKCC-----------C----------------------VNYMGRVFYQMTAQDFISW 330
           DMY+KC            C                      ++   ++F +M  +  +SW
Sbjct: 277 DMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSW 336

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
           TT+++GY Q   + ++LELF+ ++ E +  D + + +VL AC  L+     + +H +I+ 
Sbjct: 337 TTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVT 396

Query: 391 KG-LSDLVILNAIVDVYGKCGN-------------------------------IDYSRNV 418
            G L D  + NA++D+Y KCG                                +D +R+ 
Sbjct: 397 YGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDF 456

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  I  KD+VSW +M+++YV + L NE+ E+F  M  +NV+ D  TL+S LS+ + +  L
Sbjct: 457 FNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGAL 516

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             G  +N +I +    ++  + ++L+DMY +CG +++A ++F  +  K++ +WT+M+ A 
Sbjct: 517 NHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAY 576

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
            + G+   AIDL+ +ME     PDH+TF+ALL ACSH GL++EG K+   +R  Y + P 
Sbjct: 577 AMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPT 636

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
             HY C+VDLLGR  HLEE  +F+  M IEP   +W +L+ ACR H N EL E   K+L+
Sbjct: 637 IHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLI 696

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           E+DP N G +VL+SN++A + +W DV +VR ++  +G+ K PG + IE    +H F+A  
Sbjct: 697 EIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVA-- 754

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            S+  S +I   L +I  +L                + ++E       HSERLA+A+G++
Sbjct: 755 -SNLVSADILCMLQDIERRL----------------LVKQELSDTTSQHSERLAVAFGLI 797

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            + E S IR+  ++R+C DCHS  KL+S+ + RE+V+RD  RFH F  G CSC DYW
Sbjct: 798 NNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYRFHRFTDGHCSCKDYW 854



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/613 (27%), Positives = 303/613 (49%), Gaps = 72/613 (11%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A Q+     +     WN +L   +  G P  VLE Y  M   G+ +D  TF  +I AC  
Sbjct: 86  AHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCK 145

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
             D+  G+++HG +LKCG+     + N+L+ +Y+KC   ++  QLF++M  + DV+ WN+
Sbjct: 146 NFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHR-DVISWNT 204

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +IS Y   G   EAL LF EM   G++ +  T V+ +  C       +G  +H   V + 
Sbjct: 205 MISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNK 264

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLY------------------------------- 219
             ++  + N L+ MY++CGKM EA G+L                                
Sbjct: 265 LWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQL 324

Query: 220 --QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++  +  VSW +M++G+VQ   YC++++ F++++     PD+V  V  +SA   L + 
Sbjct: 325 FDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDF 384

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT-------------- 323
             G+ +HA+ +  G + D  +GN L+D+YAKC  ++   R F Q+               
Sbjct: 385 DLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGF 444

Query: 324 --------AQDF---------ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
                   A+DF         +SW T++  Y +++   ++ E+F  +Q   +  D   + 
Sbjct: 445 CRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLI 504

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           S+L +C+ +  ++    ++ YI +  +  D ++  A++D+YGKCG ++ +  +F  I  K
Sbjct: 505 SLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEK 564

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KEL 484
           +V  WT+M+++Y   G A EA++L+  M E  V+ D +T ++ L+A S   ++ +G K  
Sbjct: 565 NVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYF 624

Query: 485 NGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLH 541
           N   +R  +N+  ++     +VD+  R G L+   K    +  + D+ +W+S++ A   H
Sbjct: 625 NK--LRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSH 682

Query: 542 GRGKVAIDLFYKM 554
              ++A   F ++
Sbjct: 683 HNVELAEQAFKQL 695



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 248/532 (46%), Gaps = 81/532 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + +  QLF+K++ R V +WN M+  YV  G     L+ +  M V G+  D  T
Sbjct: 177 LYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEIT 236

Query: 61  FPCVIKACAMLKDLDCGAKIH--------------------------------GLVLKCG 88
              ++  CA LKDL+ G ++H                                GL+ +C 
Sbjct: 237 MVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCD 296

Query: 89  YDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGL 147
               D ++  +LV+ Y K     KARQLFD+M E+  +V W +++S Y   G   E+L L
Sbjct: 297 ESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERS-LVSWTTMMSGYVQGGYYCESLEL 355

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           F++M+   ++ +    V  L AC       LG  +HA  V  G  +  ++ NAL+ +YA+
Sbjct: 356 FQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAK 415

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGF------------------------------- 236
           CGK+ EA     QL  K + SWNSML GF                               
Sbjct: 416 CGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAY 475

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           V++DL+ ++ + F ++Q +  KPD+   ++ +S+  ++G L +G  ++ Y  K     D 
Sbjct: 476 VKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDA 535

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +G  L+DMY KC CV     +F Q+  ++   WT ++A YA     L+A++L+  ++  
Sbjct: 536 MLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEER 595

Query: 357 GLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKC 409
           G+  D +   ++L ACS       G K  ++ +  +  I       +     +VD+ G+ 
Sbjct: 596 GVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNII-----PTIHHYGCMVDLLGRV 650

Query: 410 GNIDYSRNVFESIE-SKDVVSWTSMI---SSYVHNGLANEALELFYLMNEAN 457
           G+++ +    E +    DV  W+S++    S+ +  LA +A +    ++  N
Sbjct: 651 GHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTN 702


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 258/748 (34%), Positives = 429/748 (57%), Gaps = 12/748 (1%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F  N+++  Y K  +  +AR LFD M ++   V W  +I  Y+ + Q  EA GLF EM R
Sbjct: 133 FSTNTMIMGYIKSGNLSEARTLFDSMFQRT-AVTWTMLIGGYAQNNQFREAFGLFIEMGR 191

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G+  +  +    L    +        ++H+  +K G +  + V+N+L+  Y +    T 
Sbjct: 192 HGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCK----TR 247

Query: 214 AAGVLYQLEN----KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
           + G+ +QL N    +DSV++N++LTG+ +     +A+  F ++Q  G +P +      ++
Sbjct: 248 SLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILT 307

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A  +L ++  G+++H + +K  FV ++ + N L+D Y+K   V    ++FY+M   D IS
Sbjct: 308 AGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGIS 367

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY-I 388
           +  ++  YA N    ++LELF+ +Q  G D       ++L   +    +   ++IH   I
Sbjct: 368 YNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTI 427

Query: 389 IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           +   +S++++ N++VD+Y KCG    +  +F  +  +  V WT+MISSYV  GL  + L+
Sbjct: 428 VTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLK 487

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           LF  M  A + +D+ T  S + A +SL+ L  GK+L+  II  G+       S+LVDMYA
Sbjct: 488 LFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYA 547

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           +CG++  A ++F  +  ++ + W ++I+A   +G G   + LF +M      PD ++ L+
Sbjct: 548 KCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLS 607

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L ACSH GL+ EG ++ + M   Y+L P  EHYA  +D+L R    +EA + +  M  E
Sbjct: 608 ILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFE 667

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDP-GNPGNYVLISNVFAASRKWKDVEQV 687
           P   +W ++L +C +H N+EL +  A +L  +    +   YV +SN++AA+ +W +V +V
Sbjct: 668 PDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKV 727

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           +  MR  G+KK P  SW+EI +K H F A DK+H +  EI KKL E+ EK+ ++ GY   
Sbjct: 728 KKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKK-GYKPD 786

Query: 748 TQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSR 807
           +   LHNV+EE KV+ L  HSER+AIA+ ++ + EGS I + KNLR C DCH+  K++S+
Sbjct: 787 SSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISK 846

Query: 808 LFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +  RE+ VRD++RFHHF  G C+C DYW
Sbjct: 847 IVRREITVRDSSRFHHFRDGFCTCRDYW 874



 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 173/579 (29%), Positives = 301/579 (51%), Gaps = 8/579 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G++ +A  LFD + QRT  TW  ++G Y  N +       +  M   GI  D  + 
Sbjct: 142 YIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSL 201

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++        ++   ++H  V+K GYDST  + NSL+  Y K      A QLF+ + E
Sbjct: 202 ATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPE 261

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D V +N++++ YS  G   EA+ LF +MQ VG     +TF A L A         G +
Sbjct: 262 R-DSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQ 320

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   VK      V+VANAL+  Y++  ++ EA+ + Y++   D +S+N ++T +  N  
Sbjct: 321 VHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGR 380

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             ++++ F+ELQ  G           +S +    NL  G+++H+  I    +S++ +GN+
Sbjct: 381 VKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNS 440

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC       R+F  +  Q  + WT +I+ Y Q   H   L+LF  +Q   + AD
Sbjct: 441 LVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGAD 500

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFE 420
                S++ AC+ L  ++  K++H +II  G +S++   +A+VD+Y KCG+I  +  +F+
Sbjct: 501 AATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQ 560

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  ++ VSW ++IS+Y  NG  +  L LF  M  + ++ DS++L+S L A S   ++++
Sbjct: 561 EMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEE 620

Query: 481 GKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINAN 538
           G +    + R      +    +S +DM  R G  D A K+   +    D I+W+S++N+ 
Sbjct: 621 GLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSC 680

Query: 539 GLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           G+H      K A +  + M+    A  ++T ++ +YA +
Sbjct: 681 GIHKNQELAKKAANQLFNMKVLRDAAPYVT-MSNIYAAA 718



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 247/493 (50%), Gaps = 17/493 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K  S+  A QLF+ + +R   T+NA+L  Y   G     +  + +M+ +G     FTF
Sbjct: 243 YCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTF 302

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ A   L D++ G ++HG V+KC +    F+ N+L+  Y+K     +A +LF  M E
Sbjct: 303 AAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPE 362

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D + +N +++ Y+ +G+  E+L LF+E+Q  G     + F   L     S    +G +
Sbjct: 363 V-DGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQ 421

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH+ T+ +    ++ V N+L+ MYA+CG+  EA  +   L  + SV W +M++ +VQ  L
Sbjct: 422 IHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGL 481

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           +   ++ F E+Q A    D     + V A   L +L  GK+LH++ I  G++S++  G+ 
Sbjct: 482 HEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSA 541

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC  +    ++F +M  ++ +SW  +I+ YAQN      L LF  +   GL  D
Sbjct: 542 LVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPD 601

Query: 362 VMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            + + S+L ACS       GL+       I+  + +K         + +D+  + G  D 
Sbjct: 602 SVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEH-----YASTIDMLCRGGRFDE 656

Query: 415 SRNVFESIE-SKDVVSWTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSALS 470
           +  +   +    D + W+S+++S   + +  LA +A    + M      +  +T+ +  +
Sbjct: 657 AEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYA 716

Query: 471 AASSLSILKKGKE 483
           AA     + K K+
Sbjct: 717 AAGEWDNVGKVKK 729



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 224/451 (49%), Gaps = 11/451 (2%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           ++  N +I  Y + G ++EA  +   +  + +V+W  ++ G+ QN+ + +A   F E+  
Sbjct: 132 IFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGR 191

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G  PD V     +S      ++   +++H++ IK G+ S L + N+L+D Y K   +  
Sbjct: 192 HGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGL 251

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             ++F  +  +D +++  ++ GY++   + +A+ LF  +Q  G         ++L A   
Sbjct: 252 AFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQ 311

Query: 375 LKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L  +   +++HG++++   + ++ + NA++D Y K   +  +  +F  +   D +S+  +
Sbjct: 312 LDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVL 371

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           ++ Y  NG   E+LELF  +     +  +    + LS A+    L  G++++   I    
Sbjct: 372 VTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDA 431

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---NGLHGRGKVAIDL 550
             E  V +SLVDMYA+CG    AN++F+ +  +  + WT+MI++    GLH  G   + L
Sbjct: 432 ISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDG---LKL 488

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLL 609
           F +M+      D  T+ +++ AC+    +  GK+    I+   Y  + +    + LVD+ 
Sbjct: 489 FVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSG--SALVDMY 546

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            +   +++A Q  + M +  +   W AL+ A
Sbjct: 547 AKCGSIKDALQMFQEMPVRNSVS-WNALISA 576



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 7/237 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG   +A ++F  ++ ++   W AM+ +YV  G     L+ +  M+   I  DA T
Sbjct: 444 MYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAAT 503

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +++ACA L  L  G ++H  ++  GY S  F  ++LV MYAKC   + A Q+F  M 
Sbjct: 504 YASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMP 563

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  V  WN++ISAY+ +G     L LF EM R GL  ++ + ++ L AC        G+
Sbjct: 564 VRNSVS-WNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGL 622

Query: 181 EIHAATV---KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           +   +     K     + Y +   I M  R G+  EA  ++ Q+    D + W+S+L
Sbjct: 623 QYFDSMTRIYKLVPKKEHYAST--IDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVL 677


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/572 (41%), Positives = 362/572 (63%), Gaps = 3/572 (0%)

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           V+ + A    G++  G+ +H   +K          NTL+DMYAKC  ++    VF  M+ 
Sbjct: 2   VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSV 61

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +  ++WT++IA YA+     +A+ LF  +  EG+  D+  I +VL AC+    +   K++
Sbjct: 62  RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDV 121

Query: 385 HGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           H YI    + S++ + NA++D+Y KCG+++ + +VF  +  KD++SW +MI  Y  N L 
Sbjct: 122 HNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLP 181

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
           NEAL LF  M    ++ D  TL   L A +SL+ L +GKE++G I+R GF  +  VA++L
Sbjct: 182 NEALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANAL 240

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           VDMY +CG   +A  +F+ + TKDLI WT MI   G+HG G  AI  F +M      PD 
Sbjct: 241 VDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDE 300

Query: 564 ITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
           ++F+++LYACSHSGL++EG +F  +M+ +  + P  EHYAC+VDLL R+  L  AY+F++
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIK 360

Query: 624 SMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKD 683
           SM IEP A +W ALL  CR+H + +L E VA+ + EL+P N G YVL++N +A + KW++
Sbjct: 361 SMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEE 420

Query: 684 VEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGG 743
           V+++R ++   GLKK PG SWIE+ +K+H F+A + SH ++ +I   L  +  K++ E G
Sbjct: 421 VKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEE-G 479

Query: 744 YVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
           Y  +T++ L N +  +K   L GHSE+LA+A+G+L       IR++KNLRVC DCH   K
Sbjct: 480 YFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAK 539

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +S+  GRE+V+RD+NRFHHF+ GVC C  +W
Sbjct: 540 FISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 212/389 (54%), Gaps = 6/389 (1%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
            V+ LQAC +    +LG  +H + VK+  + +    N L+ MYA+CG +  A  V   + 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
            +  V+W S++  + +  L  +A++ F E+   G  PD       + A    G+L NGK+
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           +H Y  +    S++ + N LMDMYAKC  +     VF +M  +D ISW T+I GY++N+ 
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNA 401
             +AL LF  + LE +  D   +  +L AC+ L  + + KE+HG+I+R G  SD  + NA
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           +VD+Y KCG    +R +F+ I +KD+++WT MI+ Y  +G  N A+  F  M +A +E D
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKV 519
            ++ +S L A S   +L +G      +++   N++  +   + +VD+ AR G L +A K 
Sbjct: 300 EVSFISILYACSHSGLLDEGWRFFN-VMQDECNVKPKLEHYACIVDLLARSGKLAMAYKF 358

Query: 520 FNCVQTK-DLILWTSMINANGLHGRGKVA 547
              +  + D  +W ++++   +H   K+A
Sbjct: 359 IKSMPIEPDATIWGALLSGCRIHHDVKLA 387



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/313 (35%), Positives = 172/313 (54%), Gaps = 8/313 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLK-CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           +++ACA   D+  G  +HG  +K C +  T F  N+L+ MYAKC     A  +FD M  +
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTF-CNTLLDMYAKCGVLDGAILVFDLMSVR 62

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE-DSSFETLGME 181
             VV W S+I+AY+  G   EA+ LF EM R G+  + +T    L AC  + S E  G +
Sbjct: 63  T-VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLEN-GKD 120

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H    ++     ++V NAL+ MYA+CG M +A  V  ++  KD +SWN+M+ G+ +N L
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F ++     KPD       + A   L +L  GKE+H + ++ GF SD Q+ N 
Sbjct: 181 PNEALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 302 LMDMYAKCCCVNYMGRVFYQM-TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           L+DMY K C V  + R+ + M   +D I+WT +IAGY  +     A+  F  ++  G++ 
Sbjct: 240 LVDMYVK-CGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEP 298

Query: 361 DVMIIGSVLMACS 373
           D +   S+L ACS
Sbjct: 299 DEVSFISILYACS 311



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 139/280 (49%), Gaps = 2/280 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A  +FD +S RTV TW +++ AY   G     +  +  M   G+S D FT
Sbjct: 42  MYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFT 101

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA    L+ G  +H  + +    S  F+ N+L+ MYAKC     A  +F  M 
Sbjct: 102 ITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMP 161

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D++ WN++I  YS +    EAL LF +M  + +  +  T    L AC   +    G 
Sbjct: 162 VK-DIISWNTMIGGYSKNSLPNEALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGK 219

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   +++G      VANAL+ MY +CG    A  +   +  KD ++W  M+ G+  + 
Sbjct: 220 EVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHG 279

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
               A+  F E++ AG +PD+V  ++ + A    G L  G
Sbjct: 280 FGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEG 319



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 7/201 (3%)

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
           +VS L A ++   +  G+ ++G  ++   + + +  ++L+DMYA+CG LD A  VF+ + 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            + ++ WTS+I A    G    AI LF++M+ E  +PD  T   +L+AC+ +G +  GK 
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 585 FLEIMRCDYQLDPWPEHYAC--LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
               +R   + D     + C  L+D+  +   +E+A      M ++     W  ++G   
Sbjct: 121 VHNYIR---ENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIIS-WNTMIGGYS 176

Query: 643 VHS-NKELGEIVAKKLLELDP 662
            +S   E   +    +LE+ P
Sbjct: 177 KNSLPNEALSLFGDMVLEMKP 197


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/667 (36%), Positives = 392/667 (58%), Gaps = 3/667 (0%)

Query: 88  GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGL 147
           G++  +F+ +SL+ +YA+      AR+LFD+M  K D VLWN +++ +   G+   A+ +
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNK-DCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           F +M+      N+ TF + L  C   +    G ++H   +  G +    VANAL+AMY++
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
            G++++A  +   + + + V+WN M+ GFVQN    +A   F E+  AG  PD +   + 
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           + +     +L  GKE+H Y ++ G   D+ + + L+D+Y KC  V    ++F Q T  D 
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +  T II+GY  N  +  ALE+FR +  E +  + + + SVL AC+GL  ++  KE+H  
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300

Query: 388 IIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           I++ GL +   + +AI+D+Y KCG +D +  +F  +  KD V W ++I++   NG   EA
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           ++LF  M    +  D +++ +ALSA ++L  L  GK ++ F+I+  F+ E    S+L+DM
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDM 420

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y +CG L +A  VF+ ++ K+ + W S+I A G HG  +V++ LF+KM  +   PDH+TF
Sbjct: 421 YGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTF 480

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           L +L AC H+G +++G ++   M  +Y +    EHYAC+VDL GRA  L EA++ +++M 
Sbjct: 481 LTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMP 540

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
             P   VW  LLGACRVH N EL E+ ++ LL+LDP N G YVL+SNV A + +W  V +
Sbjct: 541 FSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRK 600

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           +R  M+  G++K PG SWIE+    H F+A D SH ES +IY  L  +  +L +E GY  
Sbjct: 601 IRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKE-GYCP 659

Query: 747 QTQFVLH 753
           +    +H
Sbjct: 660 KPYLPMH 666



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 175/550 (31%), Positives = 293/550 (53%), Gaps = 4/550 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G + DA +LFDK+  +    WN ML  +V  GEP   ++ +  MR      ++ T
Sbjct: 16  LYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSIT 75

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+  CA     + G ++HGLV+ CG+     + N+LVAMY+K      A +LF+ M 
Sbjct: 76  FASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMP 135

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  +VV WN +I+ +  +G   EA  LF EM   G+  ++ TF + L +  +S+    G 
Sbjct: 136 DT-NVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGK 194

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   ++ G  L V++ +ALI +Y +C  +  A  +  Q  N D V   ++++G+V N 
Sbjct: 195 EIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNG 254

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L   A++ FR L      P+ V   + + A   L  L  GKELHA  +K G      +G+
Sbjct: 255 LNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGS 314

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            +MDMYAKC  ++   ++F +M  +D + W  II   +QN    +A++LFR +  EGL  
Sbjct: 315 AIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSY 374

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D + I + L AC+ L  +   K IH ++I+    S++   +A++D+YGKCGN+  +R VF
Sbjct: 375 DCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVF 434

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +  K+ VSW S+I++Y  +G    +L LF+ M E  ++ D +T ++ LSA      + 
Sbjct: 435 DMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVD 494

Query: 480 KGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMINA 537
           KG +    +  + G        + +VD++ R G L+ A   + N   + D  +W +++ A
Sbjct: 495 KGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGA 554

Query: 538 NGLHGRGKVA 547
             +HG  ++A
Sbjct: 555 CRVHGNVELA 564


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/757 (33%), Positives = 432/757 (57%), Gaps = 5/757 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A++LFD + +R V +WN+++  Y+ NG+  +V++ + +M  +G   D  TF
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+K+C+ L+D   G +IHGL +K G+D      ++L+ MYAKC     + Q F  M E
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPE 237

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K + V W++II+    +      L LF+EMQ+ G+  +  TF +  ++C   S   LG +
Sbjct: 238 K-NWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQ 296

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +K+     V +  A + MY +C  +++A  +   L N +  S+N+++ G+ ++D 
Sbjct: 297 LHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDK 356

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  FR LQ +G   D+V    A  A   +   L G ++H  ++K    S++ + N 
Sbjct: 357 GIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANA 416

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++DMY KC  +     VF +M ++D +SW  IIA + QN    K L LF  +   G++ D
Sbjct: 417 ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPD 476

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
               GSVL AC+G + ++   EIH  II  R GL   V + A++D+Y KCG ++ +  + 
Sbjct: 477 EFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI-ALIDMYSKCGMMEKAEKLH 535

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +  + VVSW ++IS +     + EA + F  M E  V+ D+ T  + L   ++L  ++
Sbjct: 536 DRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVE 595

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GK+++  II+K    +  ++S+LVDMY++CG +     +F     +D + W +M+    
Sbjct: 596 LGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYA 655

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG G+ A+ +F  M+ E+  P+H TFLA+L AC H GL+ +G  +   M  +Y LDP  
Sbjct: 656 QHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQL 715

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY+C+VD++GR+  + +A + +  M  E  A +W  LL  C++H N E+ E  A  +L+
Sbjct: 716 EHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQ 775

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P +   YVL+SN++A +  W +V ++R  MR +GLKK PG SWIEI +++H+F+  DK
Sbjct: 776 LEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDK 835

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           +H  S EIY+ L  +T+++ +  GY+  T F+L++ E
Sbjct: 836 AHPRSKEIYENLDVLTDEM-KWVGYMPDTDFILNDDE 871



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 182/668 (27%), Positives = 327/668 (48%), Gaps = 40/668 (5%)

Query: 39  PLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS 98
           P + L                TF  + + C+  K L  G + H  ++   +  T F+ N 
Sbjct: 23  PFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNC 82

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKE------------------------------DVVLW 128
           L+ MY KC D   A ++FD M +++                              DVV W
Sbjct: 83  LIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSW 142

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           NS+IS Y  +G   + + +F +M R+G V +  TF   L++C        G++IH   VK
Sbjct: 143 NSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVK 202

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            G +  V   +AL+ MYA+C K+  +    + +  K+ VSW++++ G VQND     ++ 
Sbjct: 203 MGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLEL 262

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           F+E+Q AG    Q    +   +   L  L  G +LH +A+K  F +D+ IG   +DMY K
Sbjct: 263 FKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMK 322

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  ++   ++F  +   +  S+  II GYA+++  ++AL +FR +Q  GL  D + +   
Sbjct: 323 CNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGA 382

Query: 369 LMACSGLKCMSQTKEIHGYIIRK-GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
             AC+ +K   +  ++HG  ++    S++ + NAI+D+YGKCG +  +  VFE + S+D 
Sbjct: 383 FRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDA 442

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           VSW ++I+++  NG   + L LF  M ++ +E D  T  S L A +    L  G E++  
Sbjct: 443 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 502

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
           II+    L+  V  +L+DMY++CG ++ A K+ + +  + ++ W ++I+   L  + + A
Sbjct: 503 IIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 562

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLV 606
              F KM      PD+ T+  +L  C++   +  GK+   +I++ + Q D +    + LV
Sbjct: 563 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS--STLV 620

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK--KLLELDPGN 664
           D+  +  ++++ +Q +           W A++     H    LGE   K  + ++L+   
Sbjct: 621 DMYSKCGNMQD-FQLIFEKAPNRDFVTWNAMVCGYAQHG---LGEEALKIFEYMQLENVK 676

Query: 665 PGNYVLIS 672
           P +   ++
Sbjct: 677 PNHATFLA 684



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 172/596 (28%), Positives = 311/596 (52%), Gaps = 11/596 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  + Q F  + ++   +W+A++   V N +    LE +  M+  G+ V   T
Sbjct: 218 MYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQST 277

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V ++CA L  L  G+++HG  LK  + +   I  + + MY KC +   A++LF+ + 
Sbjct: 278 FASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSL- 336

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              ++  +N+II  Y+ S + +EALG+FR +Q+ GL  +  +   A +AC     +  G+
Sbjct: 337 PNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGL 396

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H  ++KS     + VANA++ MY +CG + EA  V  ++ ++D+VSWN+++    QN 
Sbjct: 397 QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNG 456

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              K +  F  +  +G +PD+    + + A      L  G E+H   IK     D  +G 
Sbjct: 457 NEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI 516

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  +    ++  ++  Q  +SW  II+G++      +A + F  +   G+D 
Sbjct: 517 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 576

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     ++L  C+ L  +   K+IH  II+K L SD  I + +VD+Y KCGN+   + +F
Sbjct: 577 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF 636

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E   ++D V+W +M+  Y  +GL  EAL++F  M   NV+ +  T ++ L A   + +++
Sbjct: 637 EKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVE 696

Query: 480 KGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           KG    +  +   G + +    S +VD+  R G +  A ++   +  + D ++W ++++ 
Sbjct: 697 KGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSI 756

Query: 538 NGLHGRGKVAIDLFY---KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
             +HG  +VA    Y   ++E E  A      L+ +YA  ++G+ NE  K  ++MR
Sbjct: 757 CKIHGNVEVAEKAAYSILQLEPEDSAA--YVLLSNIYA--NAGMWNEVTKLRKMMR 808


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 268/785 (34%), Positives = 435/785 (55%), Gaps = 10/785 (1%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           GI+     F  +I   + L  L+   + H  ++  G  +    V  L    +      +A
Sbjct: 5   GIASTRNLFLTLINRVSTLHQLN---QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQA 61

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQACE 171
             LF  +    D+ L+N +I A+S +     A+ L+  +++   L  + +T+   +    
Sbjct: 62  SLLFSTI-PNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGAS 120

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
                 L     A ++ +G    ++V +A++A Y +  ++  A  V   +  +D+V WN+
Sbjct: 121 SLGLGLLLH---AHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNT 177

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M++G V+N  + +A+  F ++   G   D       +     L +L  G  +   A+K G
Sbjct: 178 MVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVG 237

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F S   +   L  +Y+KC  +     +F Q+   D +S+  +I+GY  NN    ++ LF+
Sbjct: 238 FHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFK 297

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCG 410
            + + G   +   I  ++        +  T+ IHG+  + G+     +  A+  VY +  
Sbjct: 298 ELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLN 357

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            I+ +R +F+    K + SW +MIS Y  NGL  +A+ LF  M +  V  + +T+ S LS
Sbjct: 358 EIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILS 417

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           A + L  L  GK ++  I R+ F     V+++L+DMYA+CG++  A ++F+ +  K+ + 
Sbjct: 418 ACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVT 477

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W +MI+  GLHG G  A++LF +M     +P  +TFL++LYACSH+GL+ EG +    M 
Sbjct: 478 WNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMV 537

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
            D+  +P PEHYAC+VDLLGRA +L++A  F+R M +EP   VW ALLGAC +H +  L 
Sbjct: 538 HDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLA 597

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
            + + KL ELDP N G YVL+SN+++A + + +   VR  ++   L KTPG + IE+ N 
Sbjct: 598 RLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANT 657

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSER 770
           +H F + D+SH ++  IY  L ++T K+ RE G+  +T   LH+VEEEEK  M+  HSE+
Sbjct: 658 LHIFTSGDQSHPQATAIYAMLEKLTGKM-REAGFQTETGTALHDVEEEEKELMVKVHSEK 716

Query: 771 LAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCS 830
           LAIA+G++ S  G+ IRI KNLRVC+DCH+  K +S++  R +VVRDANRFHHF+ G+CS
Sbjct: 717 LAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICS 776

Query: 831 CGDYW 835
           CGDYW
Sbjct: 777 CGDYW 781



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 204/414 (49%), Gaps = 3/414 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K   V  A ++FD + +R    WN M+   V N      +  +  M   GI  D+ T 
Sbjct: 151 YFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTV 210

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+   A L+DL  G  I  L +K G+ S  +++  L  +Y+KC +   AR LF ++G+
Sbjct: 211 AAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQ 270

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D+V +N++IS Y+ + +   ++ LF+E+   G   N+ + V  +          L   
Sbjct: 271 P-DLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRC 329

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH    KSG      V+ AL  +Y+R  ++  A  +  +   K   SWN+M++G+ QN L
Sbjct: 330 IHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGL 389

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA+  F+E+Q    +P+ V   + +SA  +LG L  GK +H    ++ F S++ +   
Sbjct: 390 TEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTA 449

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC  +    R+F  M  ++ ++W  +I+GY  +    +AL LF  +    +   
Sbjct: 450 LIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPT 509

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNA-IVDVYGKCGNID 413
            +   SVL ACS    + +  EI   ++   G   L    A +VD+ G+ GN+D
Sbjct: 510 GVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLD 563



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 11/362 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  A  LF ++ Q  + ++NAM+  Y  N E    +  +  + V G  V++ +
Sbjct: 251 LYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSS 310

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I        L     IHG   K G  S   +  +L  +Y++  +   AR LFD   
Sbjct: 311 IVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESS 370

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK  +  WN++IS Y+ +G   +A+ LF+EMQ+  +  N  T  + L AC      +LG 
Sbjct: 371 EK-SLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK 429

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    +      ++V+ ALI MYA+CG +TEA  +   +  K++V+WN+M++G+  + 
Sbjct: 430 WVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHG 489

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK-QGFVSDLQIG 299
              +A+  F E+  +   P  V  ++ + A    G +  G E+    +   GF       
Sbjct: 490 YGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGF------- 542

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L + YA  C V+ +GR      A DFI    +  G       L A  + +   L  L 
Sbjct: 543 EPLPEHYA--CMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLA 600

Query: 360 AD 361
           +D
Sbjct: 601 SD 602


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/754 (35%), Positives = 417/754 (55%), Gaps = 3/754 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C S  D   LF ++       WN ++  +   G     L  + RM    ++ D +T
Sbjct: 120 MYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYT 179

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP VIKAC  L ++     +H L    G+    FI +SL+ +Y        A+ LFD + 
Sbjct: 180 FPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELP 239

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D +LWN +++ Y  +G    ALG F+EM+   +  N+ +FV  L  C        G+
Sbjct: 240 VR-DCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGI 298

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   ++SG      VAN +I MY++CG + +A  +   +   D+V+WN ++ G+VQN 
Sbjct: 299 QLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNG 358

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F+ +  +G K D +   + + +  + G+L   KE+H+Y ++ G   D+ + +
Sbjct: 359 FTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKS 418

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y K   V    + F Q T  D    T +I+GY  N  +++AL LFR +  EG+  
Sbjct: 419 ALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVP 478

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVF 419
           + + + SVL AC+ L  +   KE+H  I++KGL ++  + ++I  +Y K G +D +   F
Sbjct: 479 NCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFF 538

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  KD V W  MI S+  NG    A++LF  M  +  + DS++L + LSA ++   L 
Sbjct: 539 RRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALY 598

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GKEL+ F++R  F  +  VAS+L+DMY++CG L +A  VF+ +  K+ + W S+I A G
Sbjct: 599 YGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYG 658

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HGR +  +DLF++M      PDH+TFL ++ AC H+GL++EG  +   M  +Y +    
Sbjct: 659 NHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARM 718

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EH+AC+VDL GRA  L EA+  ++SM   P A  W +LLGACR+H N EL ++ +K L+E
Sbjct: 719 EHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVE 778

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LDP N G YVL+SNV A + +W+ V +VR  M+  G++K PG SWI++    H F A D 
Sbjct: 779 LDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADG 838

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            H +S EIY    +      R+ GYV Q    LH
Sbjct: 839 CHPQSVEIYLI-LKNLLLELRKHGYVPQPYLPLH 871



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 159/508 (31%), Positives = 267/508 (52%), Gaps = 2/508 (0%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           +IH  VL CG + +  + + ++ MY  C  F+    LF R+ +    + WN +I  +S  
Sbjct: 97  QIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRL-QLCYSLPWNWLIRGFSML 155

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G    AL  F  M    +  + YTF   ++AC   +   L   +H      G ++ +++ 
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           ++LI +Y   G + +A  +  +L  +D + WN ML G+V+N  +  A+  F+E++ +  K
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P+ V  V  +S     G +  G +LH   I+ GF SD  + NT++ MY+KC  +    ++
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F  M   D ++W  +IAGY QN    +A+ LF+ +   G+  D +   S L +      +
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395

Query: 379 SQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
              KE+H YI+R G+  D+ + +A+VD+Y K G+++ +   F+     DV   T+MIS Y
Sbjct: 396 KYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGY 455

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           V NGL  EAL LF  + +  +  + +T+ S L A ++L+ LK GKEL+  I++KG     
Sbjct: 456 VLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVC 515

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            V SS+  MYA+ G LD+A + F  +  KD + W  MI +   +G+ ++AIDLF +M   
Sbjct: 516 QVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTS 575

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKF 585
               D ++  A L AC++   +  GK+ 
Sbjct: 576 GTKFDSVSLSATLSACANYPALYYGKEL 603



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 227/452 (50%), Gaps = 8/452 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  +  G N  + + + ++ MY  C    +   +  +L+   S+ WN ++ GF    
Sbjct: 97  QIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLG 156

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  A+ FF  + G+   PD+      + A G L N+   K +H  A   GF  DL IG+
Sbjct: 157 CFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGS 216

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ +Y     ++    +F ++  +D I W  ++ GY +N     AL  F+ ++   +  
Sbjct: 217 SLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKP 276

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           + +    +L  C+    +    ++HG +IR G  SD  + N I+ +Y KCGN+  +R +F
Sbjct: 277 NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIF 336

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +   D V+W  +I+ YV NG  +EA+ LF  M  + V+ DSIT  S L +      LK
Sbjct: 337 DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
             KE++ +I+R G   +  + S+LVD+Y + G +++A K F      D+ + T+MI+   
Sbjct: 397 YCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYV 456

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY---QLD 596
           L+G    A++LF  +  E   P+ +T  ++L AC+    +  GK+    + CD     L+
Sbjct: 457 LNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKE----LHCDILKKGLE 512

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
              +  + +  +  ++  L+ AYQF R M ++
Sbjct: 513 NVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK 544



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 165/340 (48%), Gaps = 4/340 (1%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           +++HA  +  G    L +G+ ++ MY  C     +G +F ++     + W  +I G++  
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVIL 399
            C   AL  F  +    +  D      V+ AC GL  +   K +H      G   DL I 
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           ++++ +Y   G I  ++ +F+ +  +D + W  M++ YV NG  N AL  F  M  + V+
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            +S++ V  LS  ++  I++ G +L+G +IR GF  + +VA++++ MY++CG L  A K+
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F+ +   D + W  +I     +G    A+ LF  M       D ITF + L +   SG +
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395

Query: 580 NEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
              K+    I+R     D + +  + LVD+  +   +E A
Sbjct: 396 KYCKEVHSYIVRHGVPFDVYLK--SALVDIYFKGGDVEMA 433


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/698 (36%), Positives = 402/698 (57%), Gaps = 5/698 (0%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G+  D +TFP VIK C  L ++  G  I  ++L+ G+D   F+ +SL+ +YA       A
Sbjct: 5   GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ-ACE 171
           R+ FD+M +K D VLWN +I+ Y   G+   A+ LF++M       ++ TF   L  +C 
Sbjct: 65  RRFFDKMIDK-DCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCS 123

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           ++  E  G ++H   V+SG +    V N L+ +Y++  ++ +A  +   +   D V WN 
Sbjct: 124 EAMVE-YGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNR 182

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M+ G+VQN     A   F E+  AG KPD +   + + +     +L   KE+H Y ++ G
Sbjct: 183 MIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHG 242

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
            + D+ + + L+D+Y KC       ++F   T  D + +T +I+GY  N  +  ALE+FR
Sbjct: 243 VILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFR 302

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCG 410
            +  + +  + +   S+L AC+GL  +   +E+HGYII+  L +   + +AI+++Y KCG
Sbjct: 303 WLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCG 362

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            +D +  +F  I  KD + W S+I+S+  +G   EA+ LF  M    V+ D +T+ +ALS
Sbjct: 363 RLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALS 422

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           A +++  L  GKE++GF+I+  F  +    S+L++MYA+CG L+IA  VFN +Q K+ + 
Sbjct: 423 ACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVA 482

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W S+I A G HG    ++ LF+ M  E   PDHITFL +L +C H+G + +G ++   M 
Sbjct: 483 WNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMT 542

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
            +Y +    EHYAC+ DL GRA HL+EA++ + SM   P A VW  LLGACRVH N EL 
Sbjct: 543 EEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELA 602

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
           E+ ++ LL+L+P N G Y+L+++V A + KW+ V +++  M+  G++K PG SWIE+ N 
Sbjct: 603 EVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNT 662

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
              F A D SH ES +IY  L        R+ GYV Q 
Sbjct: 663 TCVFFAADGSHPESPQIYSLLKS-LLLELRKVGYVPQA 699



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 164/551 (29%), Positives = 291/551 (52%), Gaps = 6/551 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   G + DA + FDK+  +    WN M+  YV  GE    ++ +  M       D+ T
Sbjct: 54  LYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVT 113

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F CV+        ++ G ++HGLV++ G D    + N+LV +Y+K      AR+LFD M 
Sbjct: 114 FACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMM- 172

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+V+WN +I  Y  +G   +A  LF EM   G+  ++ TF + L +  +SS      
Sbjct: 173 PQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIK 232

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLTGFVQN 239
           EIH   V+ G  L VY+ +ALI +Y +C     A   ++ L  K D V + +M++G+V N
Sbjct: 233 EIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACK-MFNLSTKFDIVIYTAMISGYVLN 291

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            +   A++ FR L      P+ +   + + A   L  +  G+ELH Y IK        +G
Sbjct: 292 GMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVG 351

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           + +M+MYAKC  ++    +F +++ +D I W +II  ++Q+    +A+ LFR + +EG+ 
Sbjct: 352 SAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVK 411

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D + + + L AC+ +  +   KEIHG++I+    SDL  ++A++++Y KCG ++ +R V
Sbjct: 412 YDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLV 471

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  ++ K+ V+W S+I++Y ++G   ++L LF+ M E  ++ D IT ++ LS+      +
Sbjct: 472 FNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQV 531

Query: 479 KKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMIN 536
           + G +         G   +    + + D++ R G LD A +V   +       +W +++ 
Sbjct: 532 EDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLG 591

Query: 537 ANGLHGRGKVA 547
           A  +HG  ++A
Sbjct: 592 ACRVHGNVELA 602



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 174/334 (52%), Gaps = 3/334 (0%)

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
           G G  PD+      +     L N+  GK +    ++ GF  D+ + ++L+ +YA   C+ 
Sbjct: 3   GCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIE 62

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
              R F +M  +D + W  +I GY Q      A++LF+ +       D +    VL    
Sbjct: 63  DARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISC 122

Query: 374 GLKCMSQTKEIHGYIIRKGLSDLVIL--NAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
               +   +++HG ++R GL D V L  N +V VY K   +  +R +F+ +   D+V W 
Sbjct: 123 SEAMVEYGRQLHGLVVRSGL-DFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWN 181

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
            MI  YV NG  ++A  LF  M  A ++ DSIT  S L + +  S LK+ KE++G+I+R 
Sbjct: 182 RMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRH 241

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           G  L+  + S+L+D+Y +C    +A K+FN     D++++T+MI+   L+G  K A+++F
Sbjct: 242 GVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIF 301

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
             +  +   P+ +TF ++L AC+    I  G++ 
Sbjct: 302 RWLLQKKMIPNALTFSSILPACAGLAAIKLGREL 335


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/793 (32%), Positives = 440/793 (55%), Gaps = 44/793 (5%)

Query: 84  VLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQ--- 140
           ++K G+D   + +N L+          +AR LFD+M  + +    N ++S YS SGQ   
Sbjct: 25  MVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSA 84

Query: 141 --------------------------------CLEALGLFREMQRVGLVTNAYTFVAALQ 168
                                             +A+ LFR+M R G+  +  T    L 
Sbjct: 85  AHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLN 144

Query: 169 ---ACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
              A   ++   +   +H   +K G  +  V V N L+  Y + G +  A  V  ++ ++
Sbjct: 145 LPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHR 204

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
           DSV++N+M+ G  +   + +A+  F  ++  G    +      ++ +  +G+L  G+++H
Sbjct: 205 DSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVH 264

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
              + +   S++ + N+L+D Y+KC C++ M ++F++M  +D +S+  +IAGYA N C  
Sbjct: 265 GL-VARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCAS 323

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS--DLVILNAI 402
             L LFR +Q    D   +   S+L     +  +   K+IH  ++  GLS  DLV  NA+
Sbjct: 324 IVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVG-NAL 382

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +D+Y KCG +D ++  F +   K  VSWT+MI+  V NG   EAL+LF  M  A +  D 
Sbjct: 383 IDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDR 442

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
            T  S + A+S+L+++  G++L+ ++IR G        S+L+DMY +CG LD A + F+ 
Sbjct: 443 ATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDE 502

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +  ++ I W ++I+A   +G+ K AI +F  M    F PD +TFL++L ACSH+GL  E 
Sbjct: 503 MPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEEC 562

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
            K+ E+M  +Y + PW EHY+C++D LGR    ++  + +  M  E    +W ++L +CR
Sbjct: 563 MKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCR 622

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
            H N++L  + A+KL  +   +   YV++SN+FA + KW+D   V+  MR  GL+K  G 
Sbjct: 623 THGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGY 682

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQ 762
           SW+E+ +K++SF + D+++    EI  +L  + ++++++ GY   T   L  V+++ K++
Sbjct: 683 SWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQ-GYKPDTSCTLQQVDDDIKLE 741

Query: 763 MLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFH 822
            L  HSERLAIA+ ++ +  G+ IR+ KNL  CVDCHS  K++S++  R+++VRD++RFH
Sbjct: 742 SLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFH 801

Query: 823 HFEAGVCSCGDYW 835
           HF+ G CSCGDYW
Sbjct: 802 HFKDGFCSCGDYW 814



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 158/579 (27%), Positives = 276/579 (47%), Gaps = 26/579 (4%)

Query: 2   YGKCGSVLDAEQLF--DKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL---GISV 56
           Y + G +  A  LF       R   TW  M+GA+ S     R  +  S  R +   G++ 
Sbjct: 76  YSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFAS-APGARASDAVSLFRDMLREGVAP 134

Query: 57  DAFTFPCVIKACAMLKDLDCG-------AKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYD 108
           D  T   V+     L     G       A +H   LK G   ++ +V N+L+  Y K   
Sbjct: 135 DRVTVATVLN----LPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGL 190

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              AR++F  M  + D V +N+++   S  G   EAL LF  M+R GL    +TF   L 
Sbjct: 191 LAAARRVFQEMPHR-DSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLT 249

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
                    LG ++H    ++  +  V+V N+L+  Y++C  + E   + +++  +D+VS
Sbjct: 250 VATGVGDLCLGRQVHGLVARATSS-NVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVS 308

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           +N M+ G+  N      ++ FRE+Q        +   + +S +G + ++  GK++HA  +
Sbjct: 309 YNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLV 368

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
             G  S+  +GN L+DMY+KC  ++     F     +  +SWT +I G  QN    +AL+
Sbjct: 369 LLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQ 428

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYG 407
           LF  ++  GL  D     S + A S L  +   +++H Y+IR G +S +   +A++D+Y 
Sbjct: 429 LFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYT 488

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KCG +D +   F+ +  ++ +SW ++IS+Y H G A  A+++F  M     + DS+T +S
Sbjct: 489 KCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLS 548

Query: 468 ALSAASSLSILKK-GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
            LSA S   + ++  K         G +      S ++D   R G  D   ++   +  +
Sbjct: 549 VLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFE 608

Query: 527 -DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAP 561
            D I+W+S++++   HG     +VA +  + M +    P
Sbjct: 609 DDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATP 647



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 1/170 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A+  F   + +T  +W AM+   V NG+    L+ +  MR  G+S D  T
Sbjct: 385 MYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRAT 444

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   IKA + L  +  G ++H  +++ G+ S+ F  ++L+ MY KC    +A Q FD M 
Sbjct: 445 FSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMP 504

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
           E+  +  WN++ISAY+  GQ   A+ +F  M   G   ++ TF++ L AC
Sbjct: 505 ERNSIS-WNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSAC 553


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/652 (38%), Positives = 398/652 (61%), Gaps = 6/652 (0%)

Query: 187 VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS--VSWNSMLTGFVQNDLYCK 244
           V S  +    +++ L   YAR G +  A   L       S   +WN++L    +     +
Sbjct: 28  VSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHE 87

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A++ FR L  A  +PD      A+SA  RLG+L  G+ +   A   G+ +D+ + +++++
Sbjct: 88  ALRVFRALPPAA-RPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLN 146

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +YAKC  ++   +VF +M  +D ++W+T++ G+      ++A+E++  ++ +GL+AD ++
Sbjct: 147 LYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVV 206

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           I  V+ AC+          +HGY++R  +  D+VI  ++VD+Y K G  D +R VFE + 
Sbjct: 207 IVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMP 266

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            ++ VSW+++IS     G A+EAL LF +M  + +  +S  +V AL A S L +LK GK 
Sbjct: 267 HRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKS 326

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++GFI+R    L+  V ++++DMY++CG+L  A  +F+ V ++DLI W  MI   G HGR
Sbjct: 327 IHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGR 385

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
           G+ A+ LF +M+     PDH TF +LL A SHSGL+ EGK +   M  +Y ++P  +H  
Sbjct: 386 GRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLV 445

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C+VDLL R+  +EEA   V S+  +PT  +  ALL  C  ++  ELGE  A+K+LEL PG
Sbjct: 446 CIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPG 505

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           + G   L+SN++AA++ W  V +VR  M+  G KK PG S IEI   +H+F+  D+SH +
Sbjct: 506 DVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQ 565

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
             +I + + ++  ++ R+ GY+ +T+FV H++EE  K Q+L  HSERLA A+G+L ++ G
Sbjct: 566 HRQILQMVMKLDSEM-RKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPG 624

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + + + KNLRVC DCH   K +S++  RE+VVRDA RFHHF+ G CSCGDYW
Sbjct: 625 TRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 220/455 (48%), Gaps = 16/455 (3%)

Query: 2   YGKCGSVLDAEQLFD--KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           Y + G +  AE        S  ++  WNA+L A+     P   L  + R        D+ 
Sbjct: 46  YARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVF-RALPPAARPDST 104

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF   + ACA L DL  G  +       GY +  F+ +S++ +YAKC     A ++FDRM
Sbjct: 105 TFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRM 164

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K D V W+++++ +  +GQ ++A+ ++  M+R GL  +    V  +QAC  +    +G
Sbjct: 165 -RKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMG 223

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   ++    + V ++ +L+ MYA+ G   +A  V   + +++ VSW+++++   Q 
Sbjct: 224 ASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQY 283

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  FR +Q +G  P+    V A+ A   LG L  GK +H + ++     D  +G
Sbjct: 284 GNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVG 342

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             ++DMY+KC  ++    +F ++ ++D ISW  +IA    +     AL LF+ ++   + 
Sbjct: 343 TAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVR 402

Query: 360 ADVMIIGSVLMACSGLKCMSQTK-----EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            D     S+L A S    + + K      ++ Y I  G   LV    IVD+  + G ++ 
Sbjct: 403 PDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLV---CIVDLLARSGLVEE 459

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
           +  +  S+ SK  +   S++ + +   L N  LEL
Sbjct: 460 ANGLVASLHSKPTI---SILVALLSGCLNNNKLEL 491



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 154/281 (54%), Gaps = 2/281 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG++ DA ++FD++ +R   TW+ M+  +V+ G+P++ +E Y RMR  G+  D   
Sbjct: 147 LYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVV 206

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++ACA   D   GA +HG +L+        I  SLV MYAK   F +AR++F+ M 
Sbjct: 207 IVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMP 266

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DV  W+++IS  +  G   EALGLFR MQ  GL  N+   V AL AC D     LG 
Sbjct: 267 HRNDVS-WSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGK 325

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +++ + L   V  A+I MY++CG ++ A  +  ++ ++D +SWN M+     + 
Sbjct: 326 SIHGFILRTLE-LDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHG 384

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
               A+  F+E++    +PD     + +SA    G +  GK
Sbjct: 385 RGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGK 425


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 241/658 (36%), Positives = 403/658 (61%), Gaps = 5/658 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  + SG     +++N+L+  Y  CG + +A  + +    K+ VSW  +++G  +ND
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKND 101

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +A+  FRE+     KP+ V   + + A   LG +   K +H + ++ GF  ++ +  
Sbjct: 102 CFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+K  C+    ++F  M+ ++ +SW  I++GY+ +    +A++LF  ++ +GL  
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D   I S++ A   + C+     IHG+IIR G  +D  I  A++D+Y     +D +  VF
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVF 281

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSLSIL 478
             +  KDV +WT M++ +      + A++ F  ++   N++ DSI L+  LS+ S    L
Sbjct: 282 SEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGAL 341

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           ++G+ ++   I+  F     V S+++DMYA CG L+ A + F  +  KD++ W +MI  N
Sbjct: 342 QQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGN 401

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK-FLEIMRCDYQLDP 597
           G++G G  AIDLF +M+     PD  TF+++LYACSH+G++ EG + F  +++  + + P
Sbjct: 402 GMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDI-P 460

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             +HYAC++D+LGRA  L+ AY F+ +M  +P  +V+  LLGACR+H N +LG  +++K+
Sbjct: 461 NLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKI 520

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
            E++P + G YVL+SN++A +  W+ V+  R  +R   LKK PG S IEI  +I++F+A 
Sbjct: 521 FEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAG 580

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           +K H +  +I   L  +  K+ ++ GYV  T  +L +V ++ K  +LY HSE++AIA+G+
Sbjct: 581 EKDHPQYFKIEGILKGLILKI-KKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGL 639

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +++  G++IRITKNLR C DCHS  K VS++FGR LV++DANRFH F+ GVCSC DYW
Sbjct: 640 MRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 255/507 (50%), Gaps = 6/507 (1%)

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           LKDL    +IH  ++  G     F+ NSL+  Y  C     A+Q+F     K +VV W  
Sbjct: 34  LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCK-NVVSWTI 92

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +IS  + +   +EA+ +FREM       NA T  + L A  +     +   +H   V+ G
Sbjct: 93  LISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               V+V  AL+ MY++ G M  A  +   +  ++ VSWN++++G+  +    +A+  F 
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFN 212

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            ++  G   D    ++ + AS  +G L  G  +H + I+ G+ +D  I   LMD+Y    
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVL 369
           CV+   RVF +M  +D  +WT ++ G++      +A++ F + + ++ L  D +++  +L
Sbjct: 273 CVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGIL 332

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            +CS    + Q + +H   I+   ++ + + +A++D+Y  CGN++ ++  F  +  KDVV
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV 392

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
            W +MI+    NG   +A++LF  M  + ++ D  T VS L A S   ++ +G ++   +
Sbjct: 393 CWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHM 452

Query: 489 IRKGFNLEG-SVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKV 546
           ++   ++      + ++D+  R G LD A    N +    D  ++++++ A  +HG  K+
Sbjct: 453 VKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKL 512

Query: 547 AIDLFYKM-EAESFAPDHITFLALLYA 572
             ++  K+ E E     +   L+ +YA
Sbjct: 513 GHEISQKIFEMEPNDAGYYVLLSNMYA 539



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 208/415 (50%), Gaps = 4/415 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG + DA+Q+F     + V +W  ++     N   +  ++ +  M +     +A T 
Sbjct: 66  YVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTI 125

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ A A L  +     +H   ++ G++   F+  +LV MY+K      ARQLF+ M E
Sbjct: 126 SSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSE 185

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + +VV WN+I+S YS  G   EA+ LF  M+R GL+ + YT ++ + A        +G  
Sbjct: 186 R-NVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTG 244

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   +++G     ++  AL+ +Y     + +A  V  ++  KD  +W  MLTGF     
Sbjct: 245 IHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRH 304

Query: 242 YCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           + +A++ F ++ G    K D +  +  +S+    G L  G+ +HA AIK  F +++ +G+
Sbjct: 305 WDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGS 364

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++DMYA C  +    R FY M  +D + W  +IAG   N     A++LF  ++  GLD 
Sbjct: 365 AVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDP 424

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNID 413
           D     SVL ACS    + +  +I  ++++    + +L     ++D+ G+ G +D
Sbjct: 425 DESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLD 479



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 214/401 (53%), Gaps = 12/401 (2%)

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSAS--GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
             F+R L  +     ++C +    AS   +L +L   +++HA  I  G   +  + N+LM
Sbjct: 6   FNFYRHL--SSNPTQRLCPLAQSHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLM 63

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           + Y  C  +    ++F+    ++ +SWT +I+G A+N+C ++A+++FR + +     + +
Sbjct: 64  NAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAV 123

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            I SVL A + L  +   K +H + +R G   ++ +  A+VD+Y K G +  +R +FES+
Sbjct: 124 TISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESM 183

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             ++VVSW +++S Y  +G + EA++LF LM    +  D  T++S + A+ S+  L+ G 
Sbjct: 184 SERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGT 243

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
            ++GFIIR G+  +  + ++L+D+Y     +D A++VF+ +  KD+  WT M+       
Sbjct: 244 GIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGR 303

Query: 543 RGKVAIDLFYKMEA-ESFAPDHITFLALLYACSHSGLINEGKKF--LEIMRCDYQLDPWP 599
               AI  F KM   ++   D I  + +L +CSHSG + +G++   L I  C +  + + 
Sbjct: 304 HWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTC-FANNIFV 362

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
              + ++D+     +LE+A +F   M  E     W A++  
Sbjct: 363 G--SAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNAMIAG 400



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 161/331 (48%), Gaps = 12/331 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  A QLF+ +S+R V +WNA++  Y  +G     ++ ++ MR  G+ VD +T
Sbjct: 166 MYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYT 225

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I A   +  L  G  IHG +++ GY++   I  +L+ +Y        A ++F  M 
Sbjct: 226 IMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMF 285

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLG 179
            K DV  W  +++ +S+      A+  F +M  +  L  ++   +  L +C  S     G
Sbjct: 286 VK-DVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQG 344

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +HA  +K+     ++V +A+I MYA CG + +A    Y +  KD V WN+M+ G   N
Sbjct: 345 RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMN 404

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQI 298
                A+  F +++G+G  PD+   V+ + A    G +  G ++  + +K    + +LQ 
Sbjct: 405 GYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQ- 463

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
                  YA  C ++ +GR      A  FI+
Sbjct: 464 ------HYA--CVIDILGRAGQLDAAYSFIN 486


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 261/779 (33%), Positives = 430/779 (55%), Gaps = 109/779 (13%)

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           V L N++++ YS +G  L A  LF EM     +  A+++                     
Sbjct: 49  VYLMNNLMNVYSKTGYALHARKLFDEMP----LRTAFSW--------------------- 83

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
                         N +++ YA+ G M  +     +L  +DSVSW +M+ G+     Y K
Sbjct: 84  --------------NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHK 129

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A++   E+   G +P Q    N +++      L  GK++H++ +K G   ++ + N+L++
Sbjct: 130 AIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLN 189

Query: 305 MYAKCCCVNYMGRV--------------------------------FYQMTAQDFISWTT 332
           MYAKC     M +V                                F QM  +D ++W +
Sbjct: 190 MYAKCGD-PMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248

Query: 333 IIAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
           +I+GY Q    L+AL++F + ++   L  D   + SVL AC+ L+ +   ++IH +I+  
Sbjct: 249 MISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTT 308

Query: 392 GLS-DLVILNAIVDVYGKCGNIDYSR---------------------------------N 417
           G     ++LNA++ +Y +CG ++ +R                                 N
Sbjct: 309 GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKN 368

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F+S++ +DVV+WT+MI  Y  +GL  EA+ LF  M       +S TL + LS ASSL+ 
Sbjct: 369 IFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLAS 428

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
           L  GK+++G  ++ G     SV+++L+ MYA+ G++  A++ F+ ++  +D + WTSMI 
Sbjct: 429 LGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMII 488

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           A   HG  + A++LF  M  E   PDHIT++ +  AC+H+GL+N+G+++ ++M+   ++ 
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII 548

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P   HYAC+VDL GRA  L+EA +F+  M IEP    W +LL ACRV+ N +LG++ A++
Sbjct: 549 PTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAER 608

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           LL L+P N G Y  ++N+++A  KW++  ++R  M+   +KK  G SWIE+ +K+H+F  
Sbjct: 609 LLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGV 668

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D  H + +EIY  + +I +++++  GYV  T  VLH++EEE K Q+L  HSE+LAIA+G
Sbjct: 669 EDGIHPQKNEIYITMKKIWDEIKKM-GYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFG 727

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ + + + +RI KNLRVC DCH+  K +S+L GRE++VRD  RFHHF+ G CSC DYW
Sbjct: 728 LISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 157/559 (28%), Positives = 259/559 (46%), Gaps = 102/559 (18%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLRVLETYSRM 49
           +Y K G  L A +LFD++  RT F+WN +L AY   G+           P R   +++ M
Sbjct: 58  VYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTM 117

Query: 50  --------------RVL------GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                         R++      GI    FT   V+ + A  + L+ G K+H  ++K G 
Sbjct: 118 IVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGL 177

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-------------------------- 123
                + NSL+ MYAKC D   A+ +FDRM  K+                          
Sbjct: 178 RGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQ 237

Query: 124 ----DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETL 178
               D+V WNS+IS Y+  G  L AL +F +M R  +++ + +T  + L AC +     +
Sbjct: 238 MAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCI 297

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARC------------------------------ 208
           G +IH+  V +G ++   V NALI+MY+RC                              
Sbjct: 298 GEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357

Query: 209 ---GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
              G M EA  +   L+++D V+W +M+ G+ Q+ LY +A+  FR + G  Q+P+     
Sbjct: 358 IKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLA 417

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
             +S +  L +L +GK++H  A+K G +  + + N L+ MYAK   +    R F  +  +
Sbjct: 418 AMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCE 477

Query: 326 -DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
            D +SWT++I   AQ+    +ALELF T+ +EGL  D +    V  AC+    ++Q ++ 
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537

Query: 385 HGYI--IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS---YV 438
              +  + K +  L     +VD++G+ G +  ++   E +    DVV+W S++S+   Y 
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYK 597

Query: 439 HNGLANEALELFYLMNEAN 457
           +  L   A E   L+   N
Sbjct: 598 NIDLGKVAAERLLLLEPEN 616



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 249/541 (46%), Gaps = 77/541 (14%)

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
           T F  N++++ YAK  D   + + FDR+ ++ D V W ++I  Y   GQ  +A+ +  EM
Sbjct: 79  TAFSWNTVLSAYAKRGDMDSSCEFFDRLPQR-DSVSWTTMIVGYKNIGQYHKAIRIMGEM 137

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC--- 208
            R G+  + +T    L +   +     G ++H+  VK G    V V+N+L+ MYA+C   
Sbjct: 138 MREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197

Query: 209 ----------------------------GKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                                       G+M  A     Q+  +D V+WNSM++G+ Q  
Sbjct: 198 MMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRG 257

Query: 241 LYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +A+  F + L+ +   PD+    + +SA   L  L  G+++H++ +  GF     + 
Sbjct: 258 YDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVL 317

Query: 300 NTLMDMYAKCCCVNYMGR---------------------------------VFYQMTAQD 326
           N L+ MY++C  V    R                                 +F  +  +D
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRD 377

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            ++WT +I GY Q+  + +A+ LFR++  E    +   + ++L   S L  +   K+IHG
Sbjct: 378 VVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHG 437

Query: 387 YIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNGLAN 444
             ++ G +  + + NA++ +Y K G+I  +   F+ I   +D VSWTSMI +   +G A 
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS-- 502
           EALELF  M    +  D IT V   SA +   ++ +G++   F + K  +      S   
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYA 555

Query: 503 -LVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAE 557
            +VD++ R G L  A +    +  + D++ W S+++A  ++     GKVA +    +E E
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPE 615

Query: 558 S 558
           +
Sbjct: 616 N 616


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/804 (33%), Positives = 429/804 (53%), Gaps = 78/804 (9%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N ++  YAK      A +LF RM  + DV  WN+++S Y  S Q L +L  F  M R G 
Sbjct: 95  NVMLNGYAKLGRLSDAVELFGRMPAR-DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGD 153

Query: 157 V-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
              NA+T   A+++C    + +L +++ A   K        VA AL+ M+ RCG +  A+
Sbjct: 154 SWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLAS 213

Query: 216 -------------------------GVLYQLE------NKDSVSWNSMLTGFVQNDLYCK 244
                                    GV + LE       +D VSWN M++   Q+    +
Sbjct: 214 RLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVRE 273

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+    ++Q  G + D     ++++A  RL +L  GK+LHA  I+     D  + + L++
Sbjct: 274 ALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVE 333

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +YAK  C      VF  +  ++ ++WT +I+G+ Q  C  +++ELF  ++ E +  D   
Sbjct: 334 LYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFA 393

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + +++  C     +   +++H   ++ G +  +V+ N+++ +Y KC N+  +  +F  + 
Sbjct: 394 LATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN 453

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANV------------------------- 458
            KD+VSWTSMI++Y   G   +A E F  M+E NV                         
Sbjct: 454 EKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKV 513

Query: 459 -------ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
                    D +T V+     + L   K G ++ G  ++ G  ++ SVA++++ MY++CG
Sbjct: 514 MLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCG 573

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            +  A KVF+ +  KD++ W +MI     HG GK AI++F  +      PD+I+++A+L 
Sbjct: 574 RILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 633

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
            CSHSGL+ EGK + ++M+  + + P  EH++C+VDLLGRA HL EA   +  M ++PTA
Sbjct: 634 GCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTA 693

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
           EVW ALL AC++H N EL E+ AK + ELD  + G+Y+L++ ++A + K  D  Q+R  M
Sbjct: 694 EVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLM 753

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           R  G+KK PG SW+E+ NK+H F A D SH +   I KKL E+ EK+ R  GYV      
Sbjct: 754 RDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARL-GYV------ 806

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
                  +  +    HSE+LA+A+G++       I I KNLR+C DCH+  KL+S + GR
Sbjct: 807 -----RTDSTRSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGR 861

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E V+RDA RFHHF  G CSCGDYW
Sbjct: 862 EFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 178/657 (27%), Positives = 325/657 (49%), Gaps = 71/657 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS-VDAFT 60
           Y K G + DA +LF ++  R V +WN ++  Y  + + L  LET+  M   G S  +AFT
Sbjct: 101 YAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFT 160

Query: 61  FPCVIKACAML-------------------KDLDCGAKIHGLVLKCG------------Y 89
             C +K+C  L                    D +  A +  + ++CG             
Sbjct: 161 LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIK 220

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           + T F  NS++A Y K Y    A +LFD M E+ DVV WN ++SA S SG+  EAL +  
Sbjct: 221 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPER-DVVSWNMMVSALSQSGRVREALDMVV 279

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +MQ  G+  ++ T+ ++L AC   S    G ++HA  +++  ++  YVA+AL+ +YA+ G
Sbjct: 280 DMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSG 339

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
              EA GV   L ++++V+W  +++GF+Q   + ++++ F +++      DQ      +S
Sbjct: 340 CFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLIS 399

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
                 +L  G++LH+  +K G +  + + N+L+ MYAKC  +     +F  M  +D +S
Sbjct: 400 GCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVS 459

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQ---------------LEGLDADVMIIGSVLMA--- 371
           WT++I  Y+Q     KA E F  +                  G + D + +  V+++   
Sbjct: 460 WTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEY 519

Query: 372 --------------CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
                         C+ L       +I G  ++ GL  D  + NA++ +Y KCG I  +R
Sbjct: 520 VRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEAR 579

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF+ +  KD+VSW +MI+ Y  +G+  +A+E+F  + +   + D I+ V+ LS  S   
Sbjct: 580 KVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG 639

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTS 533
           ++++GK     ++++  N+   +   S +VD+  R G L  A  + + +  K    +W +
Sbjct: 640 LVQEGK-FYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGA 698

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           +++A  +HG  ++A +L  K   E  +PD  +++ +    + +G  ++  +  ++MR
Sbjct: 699 LLSACKIHGNNELA-ELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMR 754



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 230/520 (44%), Gaps = 78/520 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYV-------------------------- 34
           M+ +CG+V  A +LF ++ + T+F  N+ML  YV                          
Sbjct: 202 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMM 261

Query: 35  -----SNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                 +G     L+    M+  G+ +D+ T+   + ACA L  L  G ++H  V++   
Sbjct: 262 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 321

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
               ++ ++LV +YAK   F++A+ +F+ + ++ +V  W  +IS +   G   E++ LF 
Sbjct: 322 HIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA-WTVLISGFLQYGCFTESVELFN 380

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +M+   +  + +     +  C       LG ++H+  +KSGQ   V V+N+LI+MYA+C 
Sbjct: 381 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 440

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL----------------- 252
            +  A  +   +  KD VSW SM+T + Q     KA +FF  +                 
Sbjct: 441 NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQ 500

Query: 253 QGAGQ---------------KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            GA +               +PD V  V        LG    G ++    +K G + D  
Sbjct: 501 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTS 560

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N ++ MY+KC  +    +VF  +  +D +SW  +I GY+Q+    +A+E+F  +   G
Sbjct: 561 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 620

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
              D +   +VL  CS       G       K  H   I  GL      + +VD+ G+ G
Sbjct: 621 AKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHN--ISPGLEH---FSCMVDLLGRAG 675

Query: 411 NIDYSRNVFESIESKDVVS-WTSMISSYVHNGLANEALEL 449
           ++  ++++ + +  K     W +++S+   +G  NE  EL
Sbjct: 676 HLTEAKDLIDDMPMKPTAEVWGALLSACKIHG-NNELAEL 714



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 207/438 (47%), Gaps = 41/438 (9%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V   N ++  YA+ G++++A  +  ++  +D  SWN++++G+ Q+  Y  +++ F  +  
Sbjct: 91  VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 150

Query: 255 AGQK-PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS--DLQIGNTLMDMYAKCCC 311
           +G   P+      A+ + G LG   +   L   A+ Q F S  D ++   L+DM+ +C  
Sbjct: 151 SGDSWPNAFTLACAMKSCGALG--WHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 208

Query: 312 VNYMGRVFYQ-------------------------------MTAQDFISWTTIIAGYAQN 340
           V+   R+F +                               M  +D +SW  +++  +Q+
Sbjct: 209 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 268

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVIL 399
               +AL++   +Q +G+  D     S L AC+ L  +   K++H  +IR     D  + 
Sbjct: 269 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 328

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           +A+V++Y K G    ++ VF S+  ++ V+WT +IS ++  G   E++ELF  M    + 
Sbjct: 329 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 388

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            D   L + +S   S   L  G++L+   ++ G      V++SL+ MYA+C  L  A  +
Sbjct: 389 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 448

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  +  KD++ WTSMI A    G    A + F  M  ++     IT+ A+L A    G  
Sbjct: 449 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAE 504

Query: 580 NEGKKFLEIMRCDYQLDP 597
            +G +  ++M  +  + P
Sbjct: 505 EDGLRMYKVMLSEEYVRP 522


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/669 (37%), Positives = 394/669 (58%), Gaps = 33/669 (4%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL-QGAGQ 257
           N L+  Y++ G ++E      +L ++D V+WN ++ G+  + L   A++ +  + +    
Sbjct: 73  NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS 132

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
              +V  +  +  S   G++  GK++H   IK GF S L +G+ L+DMY+K  C++   +
Sbjct: 133 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKK 192

Query: 318 VFYQM------------------------------TAQDFISWTTIIAGYAQNNCHLKAL 347
           VFY +                                +D +SW+ +I G AQN    +A+
Sbjct: 193 VFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAI 252

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVY 406
           E FR +++EGL  D    GSVL AC GL  ++  ++IH  IIR  L D + + +A++D+Y
Sbjct: 253 ECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMY 312

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            KC  + Y++ VF+ ++ K+VVSWT+M+  Y   G A EA+++F  M  + ++ D  TL 
Sbjct: 313 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLG 372

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
            A+SA +++S L++G + +G  I  G     +V++SLV +Y +CG +D + ++FN +  +
Sbjct: 373 QAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVR 432

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           D + WT+M++A    GR   AI LF KM      PD +T   ++ ACS +GL+ +G+++ 
Sbjct: 433 DEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYF 492

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
           E+M  +Y + P   HY+C++DL  R+  +EEA  F+  M   P A  W  LL ACR   N
Sbjct: 493 ELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGN 552

Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            E+G+  A+ L+ELDP +P  Y L+S+++A+  KW  V Q+R  M+   ++K PG SWI+
Sbjct: 553 LEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIK 612

Query: 707 IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
              K+HSF A D+S   SD+IY KL E+ +K+  + GY   T FV H+VEE  K++ML  
Sbjct: 613 WKGKLHSFSADDESSPYSDQIYAKLEELYQKI-IDNGYKPDTSFVHHDVEEAVKIKMLNC 671

Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
           HSERLAIA+G++    G  IR+ KNLRVCVDCH+  K +S + GRE++VRDA RFH F+ 
Sbjct: 672 HSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 731

Query: 827 GVCSCGDYW 835
           G CSCGD+W
Sbjct: 732 GTCSCGDFW 740



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 266/517 (51%), Gaps = 42/517 (8%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F  N+L+  Y+K     +  + F+++ ++ D V WN +I  YS SG    A+  +  M +
Sbjct: 70  FSWNNLLLAYSKSGHLSEMERTFEKLPDR-DGVTWNVLIEGYSLSGLVGAAVKAYNTMMK 128

Query: 154 VGLVTN--AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
               +N    T +  L+    +   +LG +IH   +K G    + V + L+ MY++ G +
Sbjct: 129 -DFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCI 187

Query: 212 TEAAGVLYQLEN------------------------------KDSVSWNSMLTGFVQNDL 241
           ++A  V Y L++                              KDSVSW++M+ G  QN +
Sbjct: 188 SDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGM 247

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ FRE++  G K DQ    + + A G LG + +G+++HA  I+      + +G+ 
Sbjct: 248 EKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSA 307

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMY KC C++Y   VF +M  ++ +SWT ++ GY Q     +A+++F  +Q  G+D D
Sbjct: 308 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPD 367

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFE 420
              +G  + AC+ +  + +  + HG  I  GL   + + N++V +YGKCG+ID S  +F 
Sbjct: 368 HYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFN 427

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  +D VSWT+M+S+Y   G A EA++LF  M +  ++ D +TL   +SA S   +++K
Sbjct: 428 EMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEK 487

Query: 481 GKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINAN 538
           G+     +I + G        S ++D+++R G ++ A    N +  + D I WT++++A 
Sbjct: 488 GQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSAC 547

Query: 539 GLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
              G    GK A +    +E +   P   T L+ +YA
Sbjct: 548 RNKGNLEIGKWAAESL--IELDPHHPAGYTLLSSIYA 582



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 251/512 (49%), Gaps = 48/512 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY-SRMRVLGISVDAFT 60
           Y K G + + E+ F+K+  R   TWN ++  Y  +G     ++ Y + M+    ++   T
Sbjct: 79  YSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVT 138

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF---- 116
              ++K  +    +  G +IHG V+K G++S   + + L+ MY+K      A+++F    
Sbjct: 139 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLD 198

Query: 117 DR-------------------------MGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
           DR                          G ++D V W+++I   + +G   EA+  FREM
Sbjct: 199 DRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREM 258

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
           +  GL  + Y F + L AC        G +IHA  +++     +YV +ALI MY +C  +
Sbjct: 259 KIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCL 318

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  V  +++ K+ VSW +M+ G+ Q     +A++ F ++Q +G  PD      A+SA 
Sbjct: 319 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISAC 378

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             + +L  G + H  AI  G +  + + N+L+ +Y KC  ++   R+F +M  +D +SWT
Sbjct: 379 ANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWT 438

Query: 332 TIIAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
            +++ YAQ    ++A++LF + VQL GL  D + +  V+ ACS    + + +     +I 
Sbjct: 439 AMVSAYAQFGRAVEAIQLFDKMVQL-GLKPDGVTLTGVISACSRAGLVEKGQRYFELMIN 497

Query: 391 KGLSDLVILNA----IVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISSYVHNGLANE 445
           +    +V  N     ++D++ + G I+ +      +  + D + WT+++S+  + G    
Sbjct: 498 E--YGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKG---- 551

Query: 446 ALELFYLMNEANVESDS-----ITLVSALSAA 472
            LE+     E+ +E D       TL+S++ A+
Sbjct: 552 NLEIGKWAAESLIELDPHHPAGYTLLSSIYAS 583



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 180/437 (41%), Gaps = 79/437 (18%)

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           LG   + K +H   I+     +  + N ++  YA      Y  RVF  +   +  SW  +
Sbjct: 16  LGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNL 75

Query: 334 IAGYAQNNCHLKALELFRTVQ----LEGLDADVMIIGSVLMACSG--------------- 374
           +  Y+++  HL  +E  RT +     +G+  +V+I G  L    G               
Sbjct: 76  LLAYSKSG-HLSEME--RTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS 132

Query: 375 ----------LKCMSQT------KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
                     LK  S        K+IHG +I+ G  S L++ + ++D+Y K G I  ++ 
Sbjct: 133 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKK 192

Query: 418 VFESIES------------------------------KDVVSWTSMISSYVHNGLANEAL 447
           VF  ++                               KD VSW++MI     NG+  EA+
Sbjct: 193 VFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAI 252

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
           E F  M    ++ D     S L A   L  +  G++++  IIR        V S+L+DMY
Sbjct: 253 ECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMY 312

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
            +C  L  A  VF+ ++ K+++ WT+M+   G  GR   A+ +F  M+     PDH T  
Sbjct: 313 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLG 372

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC----LVDLLGRANHLEEAYQFVR 623
             + AC++   + EG +F         +     HY      LV L G+   ++++ +   
Sbjct: 373 QAISACANISSLEEGSQFH-----GKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFN 427

Query: 624 SMQIEPTAEVWCALLGA 640
            M +      W A++ A
Sbjct: 428 EMNVRDEVS-WTAMVSA 443



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 121/239 (50%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  A+ +FD++ Q+ V +W AM+  Y   G     ++ +  M+  GI  D +T
Sbjct: 311 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYT 370

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I ACA +  L+ G++ HG  +  G      + NSLV +Y KC D   + +LF+ M 
Sbjct: 371 LGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMN 430

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +++V  W +++SAY+  G+ +EA+ LF +M ++GL  +  T    + AC  +     G 
Sbjct: 431 VRDEVS-WTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQ 489

Query: 181 EIHAATVKSGQNLQVYVANA----LIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
                 +       +  +N     +I +++R G++ EA G +  +    D++ W ++L+
Sbjct: 490 RYFELMI---NEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLS 545



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 64/287 (22%)

Query: 372 CSGLKCMSQTKEIHGYIIRK-GLSDLVILNAIVDVYGKCGNIDYSRNVF----------- 419
           C GL      K IHG IIR     +  + N IV  Y    +  Y+R VF           
Sbjct: 13  CIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSW 72

Query: 420 --------------------ESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANV 458
                               E +  +D V+W  +I  Y  +GL   A++ +  +M + + 
Sbjct: 73  NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS 132

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
               +TL++ L  +SS   +  GK+++G +I+ GF     V S L+DMY++ G +  A K
Sbjct: 133 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKK 192

Query: 519 VF------NCV------------------------QTKDLILWTSMINANGLHGRGKVAI 548
           VF      N V                          KD + W++MI     +G  K AI
Sbjct: 193 VFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAI 252

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQ 594
           + F +M+ E    D   F ++L AC   G IN+G++    I+R + Q
Sbjct: 253 ECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQ 299


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/704 (35%), Positives = 395/704 (56%), Gaps = 68/704 (9%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N +++ +A+ G +  A  V  ++   DSVSW +M+ G+    L+  A+  F  +  +G  
Sbjct: 83  NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC--------- 309
           P Q    N +++      L  GK++H++ +K G    + + N+L++MYAKC         
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVV 202

Query: 310 ----------------------CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
                                 C  +    +F QMT  D +SW +II GY      ++AL
Sbjct: 203 FDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRAL 262

Query: 348 ELFR-TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS------------ 394
           E F   ++   L  D   +GSVL AC+  + +   K+IH +I+R  +             
Sbjct: 263 ETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISM 322

Query: 395 ----------------------DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
                                 +++   +++D Y K G+ID +R +F+S++ +DVV+WT+
Sbjct: 323 YAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTA 382

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MI  Y  NGL ++AL LF LM     + ++ TL + LS  SSL+ L  GK+L+   IR  
Sbjct: 383 MIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLE 442

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKDLILWTSMINANGLHGRGKVAIDLF 551
                SV ++L+ MY+R G++  A K+FN +   +D + WTSMI +   HG G  AI+LF
Sbjct: 443 EVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELF 502

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
            KM   +  PDHIT++ +L AC+H GL+ +GK +  +M+  + ++P   HYAC++DLLGR
Sbjct: 503 EKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGR 562

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
           A  LEEAY F+R+M IEP    W +LL +CRVH   +L ++ A+KLL +DP N G Y+ +
Sbjct: 563 AGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLAL 622

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           +N  +A  KW+D  +VR  M+   +KK  G SW++I NK+H F   D  H + D IY  +
Sbjct: 623 ANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMI 682

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKN 791
           ++I +++++  G++  T  VLH++E+E K Q+L  HSE+LAIA+ ++ + + + +RI KN
Sbjct: 683 SKIWKEIKKM-GFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKN 741

Query: 792 LRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           LRVC DCHS  + +S L  RE++VRDA RFHHF+ G CSC DYW
Sbjct: 742 LRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 161/575 (28%), Positives = 260/575 (45%), Gaps = 107/575 (18%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG-------------EPLRV----- 42
           +Y K GS  DA +LFD++  +T F+WN +L A+   G             +P  V     
Sbjct: 57  LYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTM 116

Query: 43  -------------LETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                        +  + RM   GIS   FTF  V+ +CA  + LD G K+H  V+K G 
Sbjct: 117 IVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQ 176

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-------------------------- 123
                + NSL+ MYAKC D   A+ +FDRM  K+                          
Sbjct: 177 SGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQ 236

Query: 124 ----DVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETL 178
               D+V WNSII+ Y   G  + AL  F  M +   L  + +T  + L AC +     L
Sbjct: 237 MTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKL 296

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCG----------------------------- 209
           G +IHA  V++  ++   V NALI+MYA+ G                             
Sbjct: 297 GKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGY 356

Query: 210 ----KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
                +  A  +   L+++D V+W +M+ G+ QN L   A+  FR +   G KP+     
Sbjct: 357 FKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLA 416

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA- 324
             +S    L +L +GK+LHA AI+   VS + +GN L+ MY++   +    ++F  + + 
Sbjct: 417 AVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSY 476

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D ++WT++I   AQ+    +A+ELF  +    L  D +    VL AC+ +  + Q K  
Sbjct: 477 RDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSY 536

Query: 385 HGYIIRKGLSDLVILNA----IVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS-YV 438
             + + K + ++   ++    ++D+ G+ G ++ + N   ++    DVV+W S++SS  V
Sbjct: 537 --FNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRV 594

Query: 439 HN--GLANEALELFYLMNEANVESDSITLVSALSA 471
           H    LA  A E   L++  N     + L + LSA
Sbjct: 595 HKYVDLAKVAAEKLLLIDPNN-SGAYLALANTLSA 628



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 250/520 (48%), Gaps = 72/520 (13%)

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
           T F  N++++ +AK  +   AR++FD + +  D V W ++I  Y+  G    A+  F  M
Sbjct: 78  TTFSWNTILSAHAKAGNLDSARRVFDEIPQ-PDSVSWTTMIVGYNHLGLFKSAVHAFLRM 136

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG-- 209
              G+    +TF   L +C  +    +G ++H+  VK GQ+  V VAN+L+ MYA+CG  
Sbjct: 137 VSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDS 196

Query: 210 -----------------------------KMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                                        +   A  +  Q+ + D VSWNS++TG+    
Sbjct: 197 VMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQG 256

Query: 241 LYCKAMQFFR-ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +A++ F   L+ +  KPD+    + +SA     +L  GK++HA+ ++        +G
Sbjct: 257 YDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVG 316

Query: 300 NTLMDMYAKCCCVNYMGR---------------------------------VFYQMTAQD 326
           N L+ MYAK   V    R                                 +F  +  +D
Sbjct: 317 NALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRD 376

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            ++WT +I GYAQN     AL LFR +  EG   +   + +VL   S L  +   K++H 
Sbjct: 377 VVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHA 436

Query: 387 YIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIES-KDVVSWTSMISSYVHNGLAN 444
             IR + +S + + NA++ +Y + G+I  +R +F  I S +D ++WTSMI S   +GL N
Sbjct: 437 VAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGN 496

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SS 502
           EA+ELF  M   N++ D IT V  LSA + + ++++GK     +++   N+E + +  + 
Sbjct: 497 EAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFN-LMKNVHNIEPTSSHYAC 555

Query: 503 LVDMYARCGALDIA-NKVFNCVQTKDLILWTSMINANGLH 541
           ++D+  R G L+ A N + N     D++ W S++++  +H
Sbjct: 556 MIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVH 595


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/658 (37%), Positives = 399/658 (60%), Gaps = 7/658 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IHA  +++   +  + A+ ++A  A    G +  A  V  Q+ N  + + NS++ G+  
Sbjct: 58  QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTN 117

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            +L  +A+ F++ +   G  PD+    +   + G L     GK+LH ++ K GF SD  I
Sbjct: 118 KNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVL---CEGKQLHCHSTKLGFASDAYI 174

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            NTLM+MY+ C C+    +VF +M  +  +SW T+I  YAQ +   +A++LFR +++  +
Sbjct: 175 QNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASV 234

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             + + + +VL AC+  + +   K++H YI   G+    V+ +A++DVY KCG    +R+
Sbjct: 235 KPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARD 294

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  +  K++  W  MI+ +V +    EAL LF  M  + V+ D +T+ S L A + L  
Sbjct: 295 LFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGA 354

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L+ GK L+ +I ++   ++ ++ ++LVDMYA+CG+++ A +VF  +  KD++ WT++I  
Sbjct: 355 LELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVG 414

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
             + G+G  A++LF++M+     PD ITF+ +L ACSH+GL+NEG  +   M   Y + P
Sbjct: 415 LAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQP 474

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHY C+VD+LGRA  + EA   +++M + P   V   LL ACR+H N  + E  A++L
Sbjct: 475 SIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQL 534

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           +ELDP N G YVL+SN++++ + W+  +++R  M    +KK PG S IE+G  +H F+  
Sbjct: 535 IELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKG 594

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D SH +S EIY+ L ++  +L +  GYV     VL +++E+EK   L  HSE+LAIA+G+
Sbjct: 595 DVSHPQSSEIYETLDDMMRRL-KSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGL 653

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L +T G+ IR+ KNLRVC DCHS  K +S ++ RE++VRD NRFHHF  G CSC D+W
Sbjct: 654 LSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 210/409 (51%), Gaps = 18/409 (4%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           GS+  A  +F+++   T FT N+++  Y +   P + +  Y  M + G+  D FTFP + 
Sbjct: 88  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 147

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           K+C +L +   G ++H    K G+ S  +I N+L+ MY+ C     AR++FD+M  K  V
Sbjct: 148 KSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK-SV 203

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V W ++I AY+      EA+ LFR M+   +  N  T V  L AC  S       ++H  
Sbjct: 204 VSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKY 263

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
             ++G      + +AL+ +Y +CG    A  +  ++  K+   WN M+ G V++  Y +A
Sbjct: 264 IDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEA 323

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           +  F E+Q +G K D+V   + + A   LG L  GK LH Y  K+    D+ +G  L+DM
Sbjct: 324 LSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDM 383

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
           YAKC  +    RVF +M  +D ++WT +I G A     LKALELF  +Q+  +  D +  
Sbjct: 384 YAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITF 443

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
             VL ACS           H  ++ +G++     N++ + YG   +I++
Sbjct: 444 VGVLAACS-----------HAGLVNEGIA---YFNSMPNKYGIQPSIEH 478



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 161/338 (47%), Gaps = 11/338 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG ++ A ++FDK+  ++V +W  M+GAY     P   ++ + RM +  +  +  T
Sbjct: 181 MYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEIT 240

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA  +DL+   ++H  + + G      + ++L+ +Y KC  +  AR LF++M 
Sbjct: 241 LVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMP 300

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK ++  WN +I+ +       EAL LF EMQ  G+  +  T  + L AC       LG 
Sbjct: 301 EK-NLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGK 359

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    K    + V +  AL+ MYA+CG +  A  V  ++  KD ++W +++ G     
Sbjct: 360 WLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCG 419

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDLQIG 299
              KA++ F E+Q +  KPD +  V  ++A    G +  G    ++   K G    ++  
Sbjct: 420 QGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHY 479

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             ++DM         +GR      A+D I    +   Y
Sbjct: 480 GCMVDM---------LGRAGRIAEAEDLIQNMPMAPDY 508


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 270/753 (35%), Positives = 422/753 (56%), Gaps = 7/753 (0%)

Query: 2    YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
            Y   G + +A  LF ++  R V  WN M+  +   G  +  +E +  MR  GI     T 
Sbjct: 271  YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTL 330

Query: 62   PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              V+ A A L  LD G  +H   LK G  S  ++ +SLV+MYAKC     A+++FD + E
Sbjct: 331  GSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNE 390

Query: 122  KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             ++VVLWN+++  Y  +G   E + LF  M+  G   + +T+ + L AC    +  LG +
Sbjct: 391  -QNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQ 449

Query: 182  IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            +H+  +K+     ++V NAL+ MYA+ G + +A      + N+D+VSWN ++ G+VQ + 
Sbjct: 450  LHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEED 509

Query: 242  YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
              +A   FR +   G  PD+V   + +SA   +  L  GK++H  ++K G  + L  G++
Sbjct: 510  EVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSS 569

Query: 302  LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
            L+DMYAKC  ++   ++   M  +  +S   +IAGYAQ N   +A+ LFR + +EG+++ 
Sbjct: 570  LIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEGINST 628

Query: 362  VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS--DLVILNAIVDVY-GKCGNIDYSRNV 418
             +   S+L AC   + ++  ++IH  I++ GL   D  +  +++ +Y       D S   
Sbjct: 629  EITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLF 688

Query: 419  FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
             E    K  V WT+MIS    N  +  AL+L+  M   NV  D  T VSAL A + +S +
Sbjct: 689  SEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSI 748

Query: 479  KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKDLILWTSMINA 537
            K G E +  I   GF+ +   +S+LVDMYA+CG +  + +VF  + + KD+I W SMI  
Sbjct: 749  KDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVG 808

Query: 538  NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
               +G  + A+ +F +M+     PD +TFL +L ACSHSG ++EG+   ++M   Y + P
Sbjct: 809  FAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQP 868

Query: 598  WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
              +H AC+VDLLGR   L+EA +F+  +  EP A+VW  +LGACR+H +   G+  A+KL
Sbjct: 869  RADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKL 928

Query: 658  LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
            +EL+P N   YVL+SN++AAS  W +V  +R  MR  G+KK PG SWI +G + + F+A 
Sbjct: 929  IELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAG 988

Query: 718  DKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
            DKSH  + EI   L ++T  L RE  YV Q  F
Sbjct: 989  DKSHHSASEIDAILKDLT-PLMRENDYVVQLDF 1020



 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 184/598 (30%), Positives = 309/598 (51%), Gaps = 39/598 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  V  AE+ F ++  + +  WN++L  +   G P  V++ +  +   G+  + FT
Sbjct: 103 LYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFT 162

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ +CA L+ + CG ++H  V+K G++S  +   +L+ MYAKC     AR +FD   
Sbjct: 163 FAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAV 222

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  D V W S+I  Y   G   EA+ +F+EM++VG   +   FV  + A           
Sbjct: 223 EL-DKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINA----------- 270

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                                   Y   G++  A+ +  ++ N++ V+WN M++G  +  
Sbjct: 271 ------------------------YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGG 306

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++FF+ ++ AG K  +    + +SA   L  L  G  +HA A+KQG  S++ +G+
Sbjct: 307 YGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGS 366

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MYAKC  +    +VF  +  Q+ + W  ++ GY QN    + +ELF  ++  G   
Sbjct: 367 SLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYP 426

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     S+L AC+ LK +    ++H  II+ K  S+L + NA+VD+Y K G ++ +R  F
Sbjct: 427 DDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQF 486

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E I ++D VSW  +I  YV      EA  LF  MN   +  D ++L S LSA +S+  L+
Sbjct: 487 ELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLE 546

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GK+++   ++ G   +    SSL+DMYA+CGA+D A+K+  C+  + ++   ++I A  
Sbjct: 547 QGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALI-AGY 605

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLD 596
                + A++LF  M  E      ITF +LL AC     +N G++    I++   QLD
Sbjct: 606 AQINLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLD 663



 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 179/583 (30%), Positives = 310/583 (53%), Gaps = 13/583 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A+++FD ++++ V  WNAMLG YV NG    V+E +  M+  G   D FT
Sbjct: 371 MYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFT 430

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++ ACA LK LD G ++H +++K  + S  F+ N+LV MYAK      ARQ F+ + 
Sbjct: 431 YSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIR 490

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +++V  WN II  Y      +EA  LFR M  +G++ +  +  + L AC        G 
Sbjct: 491 NRDNVS-WNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGK 549

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H  +VK+GQ  ++Y  ++LI MYA+CG +  A  +L  +  +  VS N+++ G+ Q +
Sbjct: 550 QVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQIN 609

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIG 299
           L  +A+  FR++   G    ++   + + A      L  G+++H+  +K G  + D  +G
Sbjct: 610 LE-QAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLG 668

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            +L+ MY           +F + +  +  + WT +I+G +QN+C + AL+L++ ++   +
Sbjct: 669 VSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNV 728

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D     S L AC+ +  +    E H  I   G  SD +  +A+VD+Y KCG++  S  
Sbjct: 729 LPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQ 788

Query: 418 VFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           VF+ +   KDV+SW SMI  +  NG A +AL +F  M +++V  D +T +  L+A S   
Sbjct: 789 VFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSG 848

Query: 477 ILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSM 534
            + +G+ +   ++   G        + +VD+  R G+L  A +  N +    D  +W +M
Sbjct: 849 RVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATM 908

Query: 535 INANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           + A  +HG   RG+ A +   ++E ++ +P     L+ +YA S
Sbjct: 909 LGACRIHGDDIRGQQAAEKLIELEPQNSSP--YVLLSNIYAAS 949



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 255/506 (50%), Gaps = 37/506 (7%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           IH   LK G+ S   + N +V +YAKC D   A + F ++ E +D++ WNSI+S +S  G
Sbjct: 81  IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQL-EDKDILAWNSILSMHSKQG 139

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
                +  F  +   G+  N +TF   L +C        G ++H   VK G     Y   
Sbjct: 140 FPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEG 199

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP 259
           ALI MYA+C  +T+A  +       D VSW SM+ G+++  L  +A++ F+E++  GQ+P
Sbjct: 200 ALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEP 259

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           DQV  V  ++A   LG L N  +L                                   F
Sbjct: 260 DQVAFVTVINAYVDLGRLDNASDL-----------------------------------F 284

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
            +M  ++ ++W  +I+G+A+    ++A+E F+ ++  G+ +    +GSVL A + L  + 
Sbjct: 285 SRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALD 344

Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
               +H   +++GL S++ + +++V +Y KCG ++ ++ VF+++  ++VV W +M+  YV
Sbjct: 345 FGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYV 404

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NG ANE +ELF+ M       D  T  S LSA + L  L  G +L+  II+  F     
Sbjct: 405 QNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLF 464

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           V ++LVDMYA+ GAL+ A + F  ++ +D + W  +I           A  LF +M    
Sbjct: 465 VGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLG 524

Query: 559 FAPDHITFLALLYACSHSGLINEGKK 584
             PD ++  ++L AC+    + +GK+
Sbjct: 525 ILPDEVSLASILSACASVRGLEQGKQ 550



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 226/449 (50%), Gaps = 37/449 (8%)

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
           S F T    IHA ++K G   +  + N ++ +YA+C  +  A     QLE+KD ++WNS+
Sbjct: 72  SQFSTTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSI 131

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           L+   +       +++F  L  +G  P++      +S+  RL  +  G+++H   +K GF
Sbjct: 132 LSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGF 191

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            S       L+ MYAKC  +     +F      D +SWT++I GY +     +A+++F+ 
Sbjct: 192 ESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQE 251

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
           ++  G + D +                                + ++NA VD+    G +
Sbjct: 252 MEKVGQEPDQVAF------------------------------VTVINAYVDL----GRL 277

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D + ++F  + +++VV+W  MIS +   G   EA+E F  M +A ++S   TL S LSA 
Sbjct: 278 DNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAI 337

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           +SL+ L  G  ++   +++G +    V SSLV MYA+CG ++ A KVF+ +  ++++LW 
Sbjct: 338 ASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWN 397

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRC 591
           +M+     +G     ++LF+ M++  F PD  T+ ++L AC+    ++ G +    I++ 
Sbjct: 398 AMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKN 457

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
            +  + +  +   LVD+  ++  LE+A Q
Sbjct: 458 KFASNLFVGN--ALVDMYAKSGALEDARQ 484


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/804 (33%), Positives = 429/804 (53%), Gaps = 78/804 (9%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N ++  YAK      A +LF RM  + DV  WN+++S Y  S Q L +L  F  M R G 
Sbjct: 75  NVMLNGYAKLGRLSDAVELFGRMPAR-DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGD 133

Query: 157 V-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
              NA+T   A+++C    + +L +++ A   K        VA AL+ M+ RCG +  A+
Sbjct: 134 SWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLAS 193

Query: 216 -------------------------GVLYQLE------NKDSVSWNSMLTGFVQNDLYCK 244
                                    GV + LE       +D VSWN M++   Q+    +
Sbjct: 194 RLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVRE 253

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+    ++Q  G + D     ++++A  RL +L  GK+LHA  I+     D  + + L++
Sbjct: 254 ALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVE 313

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +YAK  C      VF  +  ++ ++WT +I+G+ Q  C  +++ELF  ++ E +  D   
Sbjct: 314 LYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFA 373

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + +++  C     +   +++H   ++ G +  +V+ N+++ +Y KC N+  +  +F  + 
Sbjct: 374 LATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN 433

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANV------------------------- 458
            KD+VSWTSMI++Y   G   +A E F  M+E NV                         
Sbjct: 434 EKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKV 493

Query: 459 -------ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
                    D +T V+     + L   K G ++ G  ++ G  ++ SVA++++ MY++CG
Sbjct: 494 MLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCG 553

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            +  A KVF+ +  KD++ W +MI     HG GK AI++F  +      PD+I+++A+L 
Sbjct: 554 RILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
            CSHSGL+ EGK + ++M+  + + P  EH++C+VDLLGRA HL EA   +  M ++PTA
Sbjct: 614 GCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTA 673

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
           EVW ALL AC++H N EL E+ AK + ELD  + G+Y+L++ ++A + K  D  Q+R  M
Sbjct: 674 EVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLM 733

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           R  G+KK PG SW+E+ NK+H F A D SH +   I KKL E+ EK+ R  GYV      
Sbjct: 734 RDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARL-GYV------ 786

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
                  +  +    HSE+LA+A+G++       I I KNLR+C DCH+  KL+S + GR
Sbjct: 787 -----RTDSTRSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGR 841

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E V+RDA RFHHF  G CSCGDYW
Sbjct: 842 EFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 178/657 (27%), Positives = 325/657 (49%), Gaps = 71/657 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS-VDAFT 60
           Y K G + DA +LF ++  R V +WN ++  Y  + + L  LET+  M   G S  +AFT
Sbjct: 81  YAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFT 140

Query: 61  FPCVIKACAML-------------------KDLDCGAKIHGLVLKCG------------Y 89
             C +K+C  L                    D +  A +  + ++CG             
Sbjct: 141 LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIK 200

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           + T F  NS++A Y K Y    A +LFD M E+ DVV WN ++SA S SG+  EAL +  
Sbjct: 201 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPER-DVVSWNMMVSALSQSGRVREALDMVV 259

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +MQ  G+  ++ T+ ++L AC   S    G ++HA  +++  ++  YVA+AL+ +YA+ G
Sbjct: 260 DMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSG 319

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
              EA GV   L ++++V+W  +++GF+Q   + ++++ F +++      DQ      +S
Sbjct: 320 CFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLIS 379

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
                 +L  G++LH+  +K G +  + + N+L+ MYAKC  +     +F  M  +D +S
Sbjct: 380 GCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVS 439

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQ---------------LEGLDADVMIIGSVLMA--- 371
           WT++I  Y+Q     KA E F  +                  G + D + +  V+++   
Sbjct: 440 WTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEY 499

Query: 372 --------------CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
                         C+ L       +I G  ++ GL  D  + NA++ +Y KCG I  +R
Sbjct: 500 VRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEAR 559

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF+ +  KD+VSW +MI+ Y  +G+  +A+E+F  + +   + D I+ V+ LS  S   
Sbjct: 560 KVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG 619

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTS 533
           ++++GK     ++++  N+   +   S +VD+  R G L  A  + + +  K    +W +
Sbjct: 620 LVQEGK-FYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGA 678

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           +++A  +HG  ++A +L  K   E  +PD  +++ +    + +G  ++  +  ++MR
Sbjct: 679 LLSACKIHGNNELA-ELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMR 734



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 230/520 (44%), Gaps = 78/520 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYV-------------------------- 34
           M+ +CG+V  A +LF ++ + T+F  N+ML  YV                          
Sbjct: 182 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMM 241

Query: 35  -----SNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                 +G     L+    M+  G+ +D+ T+   + ACA L  L  G ++H  V++   
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 301

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
               ++ ++LV +YAK   F++A+ +F+ + ++ +V  W  +IS +   G   E++ LF 
Sbjct: 302 HIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA-WTVLISGFLQYGCFTESVELFN 360

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +M+   +  + +     +  C       LG ++H+  +KSGQ   V V+N+LI+MYA+C 
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 420

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL----------------- 252
            +  A  +   +  KD VSW SM+T + Q     KA +FF  +                 
Sbjct: 421 NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQ 480

Query: 253 QGAGQ---------------KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            GA +               +PD V  V        LG    G ++    +K G + D  
Sbjct: 481 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTS 540

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N ++ MY+KC  +    +VF  +  +D +SW  +I GY+Q+    +A+E+F  +   G
Sbjct: 541 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 600

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
              D +   +VL  CS       G       K  H   I  GL      + +VD+ G+ G
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHN--ISPGLEH---FSCMVDLLGRAG 655

Query: 411 NIDYSRNVFESIESKDVVS-WTSMISSYVHNGLANEALEL 449
           ++  ++++ + +  K     W +++S+   +G  NE  EL
Sbjct: 656 HLTEAKDLIDDMPMKPTAEVWGALLSACKIHG-NNELAEL 694



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 207/438 (47%), Gaps = 41/438 (9%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V   N ++  YA+ G++++A  +  ++  +D  SWN++++G+ Q+  Y  +++ F  +  
Sbjct: 71  VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 130

Query: 255 AGQK-PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS--DLQIGNTLMDMYAKCCC 311
           +G   P+      A+ + G LG   +   L   A+ Q F S  D ++   L+DM+ +C  
Sbjct: 131 SGDSWPNAFTLACAMKSCGALG--WHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 188

Query: 312 VNYMGRVFYQ-------------------------------MTAQDFISWTTIIAGYAQN 340
           V+   R+F +                               M  +D +SW  +++  +Q+
Sbjct: 189 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 248

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVIL 399
               +AL++   +Q +G+  D     S L AC+ L  +   K++H  +IR     D  + 
Sbjct: 249 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 308

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           +A+V++Y K G    ++ VF S+  ++ V+WT +IS ++  G   E++ELF  M    + 
Sbjct: 309 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 368

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            D   L + +S   S   L  G++L+   ++ G      V++SL+ MYA+C  L  A  +
Sbjct: 369 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 428

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  +  KD++ WTSMI A    G    A + F  M  ++     IT+ A+L A    G  
Sbjct: 429 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAE 484

Query: 580 NEGKKFLEIMRCDYQLDP 597
            +G +  ++M  +  + P
Sbjct: 485 EDGLRMYKVMLSEEYVRP 502


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/638 (39%), Positives = 377/638 (59%), Gaps = 40/638 (6%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           L+  YA CG+      +  ++ +K+ V +N M+  +V N LY  A+  F+ +   G  PD
Sbjct: 77  LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136

Query: 261 Q---VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
                C + A S SG   NL  G ++H   +K G   +L IGN L+ MY KC  ++   R
Sbjct: 137 NYTYPCVLKACSVSG---NLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARR 193

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           V  +M  +D +SW +++AGYAQN     AL+L R ++   L  D   +GS+L A +   C
Sbjct: 194 VLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSC 253

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
                                            N+ Y +++F  ++ K ++SW  MI+ Y
Sbjct: 254 --------------------------------DNVLYVKDMFVKLKEKSLISWNVMIAVY 281

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           V+N + NEA++L+  M    VE D++++ S L A   LS    G+ ++ ++ RK      
Sbjct: 282 VNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNL 341

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            + ++L+DMYA+CG L  A  VF+ +  +D++ WTSMI+A G+ G+GK A+ LF KM   
Sbjct: 342 LLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDS 401

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
            F PD I F+++L ACSH+GL++EG+    +M  +Y + P  EHY C+VDLLGRA  ++E
Sbjct: 402 GFTPDWIAFVSVLAACSHAGLVDEGRYCFNLM-AEYGITPGIEHYNCMVDLLGRAGKIDE 460

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           AY   R M +EP   VW +LL ACRV+S+  +  + A  L +L P   G YVL+SN++A 
Sbjct: 461 AYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAK 520

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           + +W+DVE VR  M   G+KK PG+S +EI + +++F+A D+SH++S EIYK L  +  +
Sbjct: 521 AGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGR 580

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVD 797
           + +E GY+ +T   LH+VEEE+K   L  HSE+LAI + +L +  GS IRITKN+RVC D
Sbjct: 581 M-KELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGD 639

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CH   KL+S++  RE+++RD +RFHHF  GVCSCGDYW
Sbjct: 640 CHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 241/472 (51%), Gaps = 46/472 (9%)

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
           L+  YA C +    R +FD + +K +VV +N +I +Y  +G   +AL +F+ M   G   
Sbjct: 77  LMRAYAACGEPCYTRHIFDEITDK-NVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYP 135

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           + YT+   L+AC  S    +G++IH A VK G ++ +Y+ N L++MY +C  +  A  VL
Sbjct: 136 DNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVL 195

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
            ++  +D VSWNSM+ G+ QN  +  A++  RE++    KPD          +G +G+LL
Sbjct: 196 DEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPD----------AGTMGSLL 245

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
                              + NT       C  V Y+  +F ++  +  ISW  +IA Y 
Sbjct: 246 PA-----------------VTNT------SCDNVLYVKDMFVKLKEKSLISWNVMIAVYV 282

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLV 397
            N    +A++L+  +Q+ G++ D + I SVL AC  L      + IH Y+ RK L  +L+
Sbjct: 283 NNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLL 342

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           + NA++D+Y KCG +  +R VF+ +  +DVVSWTSMIS+Y  +G   +A+ LF  M ++ 
Sbjct: 343 LENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSG 402

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
              D I  VS L+A S   ++ +G+     +   G        + +VD+  R G +D A 
Sbjct: 403 FTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAY 462

Query: 518 KVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
            +   +  + +  +W S+++A  ++    +A+           A DH+  LA
Sbjct: 463 HLTRQMPMEPNERVWGSLLSACRVYSSMNIAL----------LAADHLFQLA 504



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 223/438 (50%), Gaps = 38/438 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG       +FD+++ + V  +N M+ +YV+NG     L  +  M   G   D +T+
Sbjct: 81  YAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTY 140

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           PCV+KAC++  +L  G +IHG V+K G D   +I N LV+MY KC     AR++ D M  
Sbjct: 141 PCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPG 200

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D+V WNS+++ Y+ +G+  +AL L REM+ + L  +A T  + L A  ++S + +   
Sbjct: 201 R-DMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNV--- 256

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
                        +YV +  +                 +L+ K  +SWN M+  +V N +
Sbjct: 257 -------------LYVKDMFV-----------------KLKEKSLISWNVMIAVYVNNAM 286

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  + ++Q  G +PD V   + + A G L   + G+ +H Y  ++    +L + N 
Sbjct: 287 PNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENA 346

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC C+     VF QM  +D +SWT++I+ Y  +     A+ LF+ ++  G   D
Sbjct: 347 LIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPD 406

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFE 420
            +   SVL ACS    + + +     +   G++  +   N +VD+ G+ G ID + ++  
Sbjct: 407 WIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTR 466

Query: 421 --SIESKDVVSWTSMISS 436
              +E  + V W S++S+
Sbjct: 467 QMPMEPNERV-WGSLLSA 483



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 145/325 (44%), Gaps = 34/325 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC  +  A ++ D++  R + +WN+M+  Y  NG     L+    M  L +  DA T
Sbjct: 181 MYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGT 240

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A                           + N+       C +    + +F ++ 
Sbjct: 241 MGSLLPA---------------------------VTNT------SCDNVLYVKDMFVKLK 267

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK  ++ WN +I+ Y  +    EA+ L+ +MQ  G+  +A +  + L AC D S   LG 
Sbjct: 268 EKS-LISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGR 326

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH    +      + + NALI MYA+CG + EA  V  Q+  +D VSW SM++ +  + 
Sbjct: 327 RIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSG 386

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+  F++++ +G  PD +  V+ ++A    G +  G+       + G    ++  N
Sbjct: 387 QGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYN 446

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQ 325
            ++D+  +   ++    +  QM  +
Sbjct: 447 CMVDLLGRAGKIDEAYHLTRQMPME 471



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A  +FD++  R V +W +M+ AY  +G+    +  + +MR  G + D   
Sbjct: 350 MYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIA 409

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC+    +D G     L+ + G        N +V +  +     +A  L  +M 
Sbjct: 410 FVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMP 469

Query: 121 EKEDVVLWNSIISA 134
            + +  +W S++SA
Sbjct: 470 MEPNERVWGSLLSA 483



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 46/91 (50%)

Query: 487 FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
            +I +  +   S+   L+  YA CG       +F+ +  K+++ +  MI +   +G  + 
Sbjct: 61  ILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQD 120

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           A+ +F  M  + F PD+ T+  +L ACS SG
Sbjct: 121 ALLVFKTMANQGFYPDNYTYPCVLKACSVSG 151


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/759 (32%), Positives = 433/759 (57%), Gaps = 3/759 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G++  A+ LFD + +R V +WN++L  Y+ NG   + +E + RMR L I  D  TF
Sbjct: 82  YAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATF 141

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++KAC+ ++D   G ++H L ++ G+++     ++LV MY+KC     A ++F  M E
Sbjct: 142 AVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPE 201

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + ++V W+++I+ Y  + + +E L LF++M +VG+  +  T+ +  ++C   S   LG +
Sbjct: 202 R-NLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQ 260

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +KS       +  A + MYA+C +M +A  V   L N    S+N+++ G+ + D 
Sbjct: 261 LHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQ 320

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA+  F+ LQ      D++    A++A   +   L G +LH  A+K G   ++ + NT
Sbjct: 321 GLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANT 380

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++DMY KC  +     +F +M  +D +SW  IIA + QN   +K L LF ++    ++ D
Sbjct: 381 ILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPD 440

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
               GSV+ AC+G + ++   EIHG II+ G+  D  + +A+VD+YGKCG +  +  +  
Sbjct: 441 DFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHA 500

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +E K  VSW S+IS +     +  A   F  M E  +  D+ T  + L   ++++ ++ 
Sbjct: 501 RLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIEL 560

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++  I++   + +  +AS+LVDMY++CG +  +  +F     +D + W++MI A   
Sbjct: 561 GKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAY 620

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG G+ AI+LF +M+  +  P+H  F+++L AC+H G +++G  + + M   Y LDP  E
Sbjct: 621 HGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQME 680

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY+C+VDLLGR+  + EA + + SM  E    +W  LL  C++  N E+ E     LL+L
Sbjct: 681 HYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQL 740

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP +   YVL++NV+A    W +V ++R  M+   LKK PG SWIE+ +++H+F+  DK+
Sbjct: 741 DPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKA 800

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           H  S+EIY++   + +++ +  GYV    F+L    EE+
Sbjct: 801 HPRSEEIYEQTHLLVDEM-KWAGYVPDIDFMLDEEMEEQ 838



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 177/648 (27%), Positives = 320/648 (49%), Gaps = 40/648 (6%)

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            TF  +++ C+ LK L+ G ++H  ++  G+  T ++ N L+  Y K      A ++FDR
Sbjct: 7   LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66

Query: 119 MGEKE------------------------------DVVLWNSIISAYSASGQCLEALGLF 148
           M +++                              DVV WNS++S Y  +G   +++ +F
Sbjct: 67  MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
             M+ + +  +  TF   L+AC       LG+++H   ++ G    V   +AL+ MY++C
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
            K+ +A  V  ++  ++ V W++++ G+VQND + + ++ F+++   G    Q    +  
Sbjct: 187 KKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            +   L     G +LH +A+K  F  D  IG   +DMYAKC  +    +VF  +      
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQ 306

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           S+  II GYA+ +  LKAL++F+++Q   L  D + +   L ACS +K   +  ++HG  
Sbjct: 307 SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLA 366

Query: 389 IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           ++ GL  ++ + N I+D+YGKCG +  +  +FE +E +D VSW ++I+++  N    + L
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTL 426

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
            LF  M  + +E D  T  S + A +    L  G E++G II+ G  L+  V S+LVDMY
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMY 486

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
            +CG L  A K+   ++ K  + W S+I+      + + A   F +M      PD+ T+ 
Sbjct: 487 GKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYA 546

Query: 568 ALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
            +L  C++   I  GK+   +I++     D +    + LVD+  +  +++++ + +    
Sbjct: 547 TVLDVCANMATIELGKQIHAQILKLQLHSDVYIA--STLVDMYSKCGNMQDS-RLMFEKA 603

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGN--PGNYVLIS 672
            +     W A++ A   H    LGE       E+   N  P + + IS
Sbjct: 604 PKRDYVTWSAMICAYAYHG---LGEKAINLFEEMQLLNVKPNHTIFIS 648



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 169/602 (28%), Positives = 298/602 (49%), Gaps = 8/602 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  + DA ++F ++ +R +  W+A++  YV N   +  L+ +  M  +G+ V   T
Sbjct: 182 MYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQST 241

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V ++CA L     G ++HG  LK  +     I  + + MYAKC     A ++F+ + 
Sbjct: 242 YASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLP 301

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
                  +N+II  Y+   Q L+AL +F+ +QR  L  +  +   AL AC        G+
Sbjct: 302 NPPRQS-YNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGI 360

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   VK G    + VAN ++ MY +CG + EA  +  ++E +D+VSWN+++    QN+
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNE 420

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              K +  F  +  +  +PD     + V A      L  G E+H   IK G   D  +G+
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGS 480

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY KC  +    ++  ++  +  +SW +II+G++       A   F  +   G+  
Sbjct: 481 ALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIP 540

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     +VL  C+ +  +   K+IH  I++  L SD+ I + +VD+Y KCGN+  SR +F
Sbjct: 541 DNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMF 600

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E    +D V+W++MI +Y ++GL  +A+ LF  M   NV+ +    +S L A + +  + 
Sbjct: 601 EKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVD 660

Query: 480 KGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           KG       +   G + +    S +VD+  R G ++ A K+   +  + D ++W ++++ 
Sbjct: 661 KGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSN 720

Query: 538 NGLHGRGKVAIDLFYK-MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR-CDYQL 595
             + G  +VA   F   ++ +         LA +YA    G+  E  K   IM+ C  + 
Sbjct: 721 CKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAI--VGMWGEVAKMRSIMKNCKLKK 778

Query: 596 DP 597
           +P
Sbjct: 779 EP 780



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 149/599 (24%), Positives = 273/599 (45%), Gaps = 59/599 (9%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           T   TF   LQ C +      G ++H   + +G    +YVAN L+  Y +  KM  A  V
Sbjct: 4   TKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKV 63

Query: 218 LYQLENKDS-------------------------------VSWNSMLTGFVQNDLYCKAM 246
             ++  +D                                VSWNS+L+ ++ N +  K++
Sbjct: 64  FDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSI 123

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
           + F  ++      D       + A   + +   G ++H  AI+ GF +D+  G+ L+DMY
Sbjct: 124 EIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
           +KC  ++   RVF +M  ++ + W+ +IAGY QN+  ++ L+LF+ +   G+        
Sbjct: 184 SKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYA 243

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           SV  +C+GL       ++HG+ ++   + D +I  A +D+Y KC  +  +  VF ++ + 
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNP 303

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
              S+ ++I  Y       +AL++F  +   N+  D I+L  AL+A S +    +G +L+
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLH 363

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
           G  ++ G      VA++++DMY +CGAL  A  +F  ++ +D + W ++I A+  +    
Sbjct: 364 GLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIV 423

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYAC 604
             + LF  M   +  PD  T+ +++ AC+    +N G +    I++    LD W    A 
Sbjct: 424 KTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLD-WFVGSA- 481

Query: 605 LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGN 664
           LVD+ G+   L EA +    ++ E T   W +++         E  +    ++LE+    
Sbjct: 482 LVDMYGKCGMLMEAEKIHARLE-EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGI-I 539

Query: 665 PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           P NY                         + L      + IE+G +IH+ I + + HS+
Sbjct: 540 PDNYTY----------------------ATVLDVCANMATIELGKQIHAQILKLQLHSD 576


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/747 (35%), Positives = 434/747 (58%), Gaps = 18/747 (2%)

Query: 102 MYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAY 161
           MYA C     A+  FD + E+ ++  W  +++A++ SGQ  E L     M++ G+  +A 
Sbjct: 1   MYAHCDSPGDAKAAFDAL-EQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAV 59

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           TF+ AL +C D      G+ IH   V S   +   V+NAL+ MY +CG ++ A  V  ++
Sbjct: 60  TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119

Query: 222 E-NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           E  ++ +SW+ M      +    +A++ FR +   G K  +   V  +SA      + +G
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--TAQDFISWTTIIAGYA 338
           + +H+     GF S+L + N +M MY +C  V    +VF  M    +D +SW  +++ Y 
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
            N+    A++L++ +QL     D +   S+L ACS  + +   + +H  I+   L   VI
Sbjct: 240 HNDRGKDAIQLYQRMQLR---PDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296

Query: 399 L-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE-- 455
           + NA+V +Y KCG+   +R VF+ +E + ++SWT++IS+YV   L  EA  LF  M E  
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 356

Query: 456 -----ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
                  V+ D++  V+ L+A + +S L++GK ++      G + + +V +++V++Y +C
Sbjct: 357 KNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC 416

Query: 511 GALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           G ++ A ++F+ V ++ D+ LW +MI      G+   A+ LF++ME E   PD  +F+++
Sbjct: 417 GEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSI 476

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQ-LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           L ACSH+GL ++GK +   M  +Y+ +    +H+ C+ DLLGR   L+EA +F+  + ++
Sbjct: 477 LLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVK 536

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
           P A  W +LL ACR H + +  + VA KLL L+P     YV +SN++A  +KW  V +VR
Sbjct: 537 PDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVR 596

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
             M   G+KK  G S IEIG  +H F   D +H  + EI ++LA++  ++ +E GYV  T
Sbjct: 597 KFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQM-KECGYVPDT 655

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
           + VLH V+E+EK ++L+ HSERLAIA G++ +  G+ +R+TKNLRVC DCH+  KL+S++
Sbjct: 656 KMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKI 715

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
            GR++VVRD  RFH F+ G CSC DYW
Sbjct: 716 AGRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 176/568 (30%), Positives = 287/568 (50%), Gaps = 17/568 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C S  DA+  FD + QR +++W  ++ A+  +G+    L    RMR  G+  DA T
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   + +C   + L  G +IH +V+    +    + N+L+ MY KC     A+++F +M 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              +V+ W+ +  A++  G   EAL  FR M  +G+       V  L AC   +    G 
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN--KDSVSWNSMLTGFVQ 238
            IH+    SG   ++ VANA++ MY RCG + EA  V   ++   +D VSWN ML+ +V 
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           ND    A+Q ++ +Q    +PD+V  V+ +SA     ++  G+ LH   +      ++ +
Sbjct: 241 NDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN-----CHL--KALELFR 351
           GN L+ MYAKC        VF +M  +  ISWTTII+ Y +       CHL  + LEL +
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEK 357

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
               + +  D +   ++L AC+ +  + Q K +       GL SD  +  A+V++YGKCG
Sbjct: 358 NGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCG 417

Query: 411 NIDYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
            I+ +R +F+++ S+ DV  W +MI+ Y   G ++EAL+LF+ M    V  DS + VS L
Sbjct: 418 EIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSIL 477

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK- 526
            A S   +  +GK     +  +  N+  ++     + D+  R G L  A +    +  K 
Sbjct: 478 LACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKP 537

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKM 554
           D + WTS++ A   H   K A ++  K+
Sbjct: 538 DAVAWTSLLAACRNHRDLKRAKEVANKL 565


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 251/702 (35%), Positives = 411/702 (58%), Gaps = 44/702 (6%)

Query: 173 SSFETLGMEIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           SS+  LG   +A  V     +  +Y  N +++ Y++ G+++E   +   +  +D VSWNS
Sbjct: 52  SSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNS 111

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL------GNLLNGKELHA 285
           +++G+    L  ++++ +  +     K D    +N ++ S  L      G +  G+++H 
Sbjct: 112 LISGYAGCGLIYQSVKAYNLML----KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHG 167

Query: 286 YAIKQGFVSDLQIGNTLMDMYAK-------------------------------CCCVNY 314
           + +K GF+S + +G+ L+DMY+K                               C  V  
Sbjct: 168 HVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVED 227

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             R+F++M  +D ISWT++I G+ QN     A+++FR ++LE L  D    GSVL AC G
Sbjct: 228 SKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGG 287

Query: 375 LKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +  + + K++H YIIR    D + + +A+VD+Y KC NI  +  VF+ +  K+VVSWT+M
Sbjct: 288 VMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAM 347

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           +  Y  NG + EA++ F  M +  +E D  TL S +S+ ++L+ L++G + +   +  G 
Sbjct: 348 LVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGL 407

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
               +V+++LV +Y +CG+++ ++++FN +  KD + WT++++     G+    I LF  
Sbjct: 408 ISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFES 467

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           M A    PD +TF+ +L ACS +GL+ +G +  E M  ++ + P  +HY C++DL  RA 
Sbjct: 468 MLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAG 527

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISN 673
            +EEA  F+  M   P A  W  LL +CR + N ++G+  A+ L+ELDP N  +YVL+S+
Sbjct: 528 RIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSS 587

Query: 674 VFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
           V+AA  KW++V ++R  MR  GL+K PG SWI+  N++H F A DKS+  SD+IY +L +
Sbjct: 588 VYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEK 647

Query: 734 ITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLR 793
           +  K+ +E GYV     VLH+V + EK++ML  HSE+LAIA+G+L    G  IR+ KNLR
Sbjct: 648 LNYKMIKE-GYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 706

Query: 794 VCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           VC DCH+  K +S++  RE++VRD  RFH F+ G CSCGD+W
Sbjct: 707 VCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 157/571 (27%), Positives = 272/571 (47%), Gaps = 79/571 (13%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++K C    +      +H  ++K       F++N+L++ YAK      A ++FD+M    
Sbjct: 15  LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQM-PHP 73

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQR---------------VGLV----------- 157
           ++  WN+I+SAYS  G+  E   LF  M R                GL+           
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 158 -------TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA---- 206
                   N  TF   L          LG +IH   VK G    V+V + L+ MY+    
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193

Query: 207 ---------------------------RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                                      RCG++ ++  + +++  +DS+SW SM+TGF QN
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L   A+  FRE++    + DQ    + ++A G +  L  GK++HAY I+  +  ++ + 
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           + L+DMY KC  +     VF +MT ++ +SWT ++ GY QN    +A++ F  +Q  G++
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D   +GSV+ +C+ L  + +  + H   +  GL S + + NA+V +YGKCG+I+ S  +
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRL 433

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  I  KD V+WT+++S Y   G ANE + LF  M    ++ D +T +  LSA S   ++
Sbjct: 434 FNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLV 493

Query: 479 KKGKELNGFIIRKGFNLEGSVA-----SSLVDMYARCGALDIANKVFNCVQ-TKDLILWT 532
           +KG +    I     N  G V      + ++D+++R G ++ A    N +  + D I W 
Sbjct: 494 EKGNQ----IFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWA 549

Query: 533 SMINANGLHGR---GKVAIDLFYKMEAESFA 560
           +++++   +G    GK A +   +++  + A
Sbjct: 550 TLLSSCRFYGNMDIGKWAAEFLMELDPHNTA 580



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 252/509 (49%), Gaps = 40/509 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM--RVLGISVDAF 59
           Y K G V + E LFD + +R   +WN+++  Y   G   + ++ Y+ M       +++  
Sbjct: 85  YSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRI 144

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  ++   +    +  G +IHG V+K G+ S  F+ + LV MY+K      AR++FD +
Sbjct: 145 TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDEL 204

Query: 120 GEK------------------------------EDVVLWNSIISAYSASGQCLEALGLFR 149
            EK                               D + W S+I+ ++ +G   +A+ +FR
Sbjct: 205 PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFR 264

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EM+   L  + YTF + L AC        G ++HA  +++     ++VA+AL+ MY +C 
Sbjct: 265 EMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCK 324

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            +  A  V  ++  K+ VSW +ML G+ QN    +A++ F ++Q  G +PD     + +S
Sbjct: 325 NIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 384

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           +   L +L  G + HA A+  G +S + + N L+ +Y KC  +    R+F +++ +D ++
Sbjct: 385 SCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVT 444

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           WT +++GYAQ     + + LF ++   GL  D +    VL ACS    + +  +I   +I
Sbjct: 445 WTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMI 504

Query: 390 RK-GLSDLVI-LNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS---YVHNGLA 443
            + G+  +      ++D++ + G I+ +RN    +  S D +SW +++SS   Y +  + 
Sbjct: 505 NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIG 564

Query: 444 NEALELFYLMNEANVESDSITLVSALSAA 472
             A E    ++  N  + S  L+S++ AA
Sbjct: 565 KWAAEFLMELDPHN--TASYVLLSSVYAA 591



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 134/257 (52%), Gaps = 6/257 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC ++  AE +F K++ + V +W AML  Y  NG     ++T+S M+  GI  D FT
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 378

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +CA L  L+ GA+ H   L  G  S   + N+LV +Y KC     + +LF+ + 
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K++V  W +++S Y+  G+  E +GLF  M   GL  +  TF+  L AC  +     G 
Sbjct: 439 FKDEVT-WTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGN 497

Query: 181 EIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG--F 236
           +I  + +     + +      +I +++R G++ EA   + ++  + D++SW ++L+   F
Sbjct: 498 QIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRF 557

Query: 237 VQN-DLYCKAMQFFREL 252
             N D+   A +F  EL
Sbjct: 558 YGNMDIGKWAAEFLMEL 574


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/810 (33%), Positives = 436/810 (53%), Gaps = 44/810 (5%)

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK-----CYDF-RKARQLFDR 118
           ++ C  L  L    ++H  + K G D     +  LV   A+       D+ RKA +LF  
Sbjct: 32  LRCCKTLNQLK---QLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKE 88

Query: 119 MGEKEDVV-LWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
               +D + + NS+I  YS++G   EA+ L+  M  +G+  N YTF   L  C   +   
Sbjct: 89  DVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFC 148

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G+++H + VK G    V++ N LI  YA CG M     V   +  ++ VSW S++ G+ 
Sbjct: 149 EGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYA 208

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           + D   +A+  F E+  AG +P  V  V  +SA  +L +L  G+ + AY  + G   +  
Sbjct: 209 RGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKV 268

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N L+DMY KC  ++   R+F +   ++ + + TI++ YA+     +AL +   +  +G
Sbjct: 269 MVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQG 328

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSR 416
              D + + S + A + L  +   K  HGY+IR GL     I N I+D+Y KCG  + + 
Sbjct: 329 PRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMAC 388

Query: 417 NVFESIESKDVVSWTSMISSYVHNG-------------------------------LANE 445
            VF+ + +K VVSW S+ + ++ NG                               L  +
Sbjct: 389 RVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFED 448

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A+ELF  M    +++D +T++   SA   L   +  K ++ +I + G   +  + ++LVD
Sbjct: 449 AIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVD 508

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           M+ARCG    A +VFN +  +D+  WT+ I    + G G+ A  LF +M  +   PD + 
Sbjct: 509 MFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVL 568

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F+ +L ACSH G + +G     +M  D+ + P  EHY C+VDLLGRA  L EA+  ++SM
Sbjct: 569 FVQVLTACSHGGQVEQGLHIFSLME-DHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSM 627

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
            +EP   VW +LL ACRVH N E+    A+++ EL P   G +VL+SN++A++ KW DV 
Sbjct: 628 PMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVA 687

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
           +VR+ +R  G++K PGSS +++   IH F + D+SH E   I   L E+  +   + G++
Sbjct: 688 RVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFS-DAGHI 746

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
                VL +V+E+EK  +L  HSE+LAIA+G++ +     IR+ KNLR+C DCHSF K+ 
Sbjct: 747 PDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMA 806

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S ++ RE++VRD NRFH F  G+CSC DYW
Sbjct: 807 SIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 169/608 (27%), Positives = 286/608 (47%), Gaps = 52/608 (8%)

Query: 11  AEQLF--DKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKAC 68
           A +LF  D  S   +F  N+++  Y S G     +  Y RM VLG++ + +TFP V+  C
Sbjct: 82  AFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGC 141

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW 128
             +     G ++HG V+K G +   FI N L+  YA+C       ++F+ M E+ +VV W
Sbjct: 142 TKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER-NVVSW 200

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
            S+I  Y+   +  EA+ LF EM   G+  ++ T V  + AC       +G  + A   +
Sbjct: 201 TSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGE 260

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            G  L   + NAL+ MY +CG +  A  +  +  +++ V +N++L+ + +  L  +A+  
Sbjct: 261 LGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAI 320

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
             E+   G +PD+V  ++A+SAS +L +L  GK  H Y I+ G      IGN ++DMY K
Sbjct: 321 LDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMK 380

Query: 309 CCCVNYMGRVFYQMTAQDFIS-------------------------------WTTIIAGY 337
           C       RVF  M+ +  +S                               W T+I+G 
Sbjct: 381 CGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGL 440

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
            Q +    A+ELFR +Q EG+ AD + +  +  AC  L      K +H YI + G+  D+
Sbjct: 441 VQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDM 500

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            +  A+VD++ +CG+   +  VF  +  +DV +WT+ I +    G    A  LF  M   
Sbjct: 501 RLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQ 560

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            V+ D +  V  L+A S    +++G  +   +   G + +      +VD+  R G L   
Sbjct: 561 GVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLL--- 617

Query: 517 NKVFNCVQTKDL----ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
            + F+ +++  +    ++W S++ A  +H            +E  ++A + I  LA   A
Sbjct: 618 REAFDLIKSMPMEPNDVVWGSLLAACRVH----------KNVEMATYAAERINELAPQRA 667

Query: 573 CSHSGLIN 580
             H  L N
Sbjct: 668 GVHVLLSN 675



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 225/469 (47%), Gaps = 36/469 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y +CG +    ++F+ +S+R V +W +++  Y     P   +  +  M   GI   + T 
Sbjct: 176 YAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTM 235

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
            CVI ACA L+DLD G ++   + + G      +VN+LV MY KC     A++LFD   +
Sbjct: 236 VCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVD 295

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + ++VL+N+I+S Y+  G   EAL +  EM + G   +  T ++A+ A         G  
Sbjct: 296 R-NLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKV 354

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS---------- 231
            H   +++G      + N +I MY +CGK   A  V   + NK  VSWNS          
Sbjct: 355 CHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGD 414

Query: 232 ---------------------MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
                                M++G VQ  L+  A++ FRE+QG G K D+V  +   SA
Sbjct: 415 VESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASA 474

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
            G LG     K +H Y  K G   D+++   L+DM+A+C       +VF +MT +D  +W
Sbjct: 475 CGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAW 534

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
           T  I   A       A  LF  + ++G+  DV++   VL ACS    + Q   I   +  
Sbjct: 535 TAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED 594

Query: 391 KGLSDLV-ILNAIVDVYGKCGNIDYSRNVFES--IESKDVVSWTSMISS 436
            G+S  +     +VD+ G+ G +  + ++ +S  +E  DVV W S++++
Sbjct: 595 HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVV-WGSLLAA 642



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 162/415 (39%), Gaps = 50/415 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A++LFD+   R +  +N +L  Y   G     L     M   G   D  T
Sbjct: 276 MYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVT 335

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I A A L DL  G   HG V++ G +  D I N ++ MY KC     A ++FD M 
Sbjct: 336 MLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMS 395

Query: 121 EK------------------------------EDVVLWNSIISAYSASGQCLEALGLFRE 150
            K                               + V WN++IS         +A+ LFRE
Sbjct: 396 NKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFRE 455

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           MQ  G+  +  T +    AC       L   +H    K+G    + +  AL+ M+ARCG 
Sbjct: 456 MQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGD 515

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
              A  V  ++  +D  +W + +           A   F ++   G KPD V  V  ++A
Sbjct: 516 PQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTA 575

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS- 329
               G +  G  LH +++ +      QI     + Y   C V+ +GR      A D I  
Sbjct: 576 CSHGGQVEQG--LHIFSLMEDHGISPQI-----EHYG--CMVDLLGRAGLLREAFDLIKS 626

Query: 330 ---------WTTIIAG-YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
                    W +++A      N  +      R  +L    A V ++ S + A +G
Sbjct: 627 MPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAG 681


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/783 (35%), Positives = 431/783 (55%), Gaps = 24/783 (3%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHG-LVLKCGYDSTD-FIVNSLVAMYAKCYDFRKAR 113
           VD+F     ++ C    D   G  +HG +V + G    D F  N L+ MY K      AR
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           +LFDRM E+ ++V + +++ A++  G    A  LFR ++  G   N +     L+     
Sbjct: 117 RLFDRMPER-NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
               L   +H+   K G +   +V + LI  Y+ C  +++A  V   +  KD+V W +M+
Sbjct: 176 DAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           + + +ND  C    F         +  Q C++ A+S + R G       +H  AIK    
Sbjct: 236 SCYSEND--CPENAF---------RCAQSCSLLAISCA-RQG-------IHGCAIKTLND 276

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           ++  +G  L+DMYAKC  +      F  +   D I  + +I+ YAQ+N + +A ELF  +
Sbjct: 277 TEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRL 336

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
               +  +   + SVL AC+ +  +   K+IH + I+ G  SDL + NA++D Y KC ++
Sbjct: 337 MRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM 396

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D S  +F S+   + VSW +++  +  +GL  EAL +F  M  A +    +T  S L A 
Sbjct: 397 DSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 456

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           +S + ++   +++  I +  FN +  + +SL+D YA+CG +  A KVF  +  +D+I W 
Sbjct: 457 ASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWN 516

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           ++I+   LHG+   A++LF +M   +   + ITF+ALL  C  +GL+N G    + MR D
Sbjct: 517 AIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRID 576

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
           + + P  EHY C+V LLGRA  L +A QF+  +   P+A VW ALL +C +H N  LG  
Sbjct: 577 HGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRF 636

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
            A+K+LE++P +   YVL+SN++AA+     V  +R  MR  G++K PG SW+EI  +IH
Sbjct: 637 SAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIH 696

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLA 772
           +F      H +   I   L  +  K  RE GY+     VLH+V++E+K +ML+ HSERLA
Sbjct: 697 AFSVGSVDHPDMRVINAMLEWLNLKTSRE-GYIPDINVVLHDVDKEQKTRMLWVHSERLA 755

Query: 773 IAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           +AYG++ +  G  IRI KNLR C+DCH+   ++S++  RE++VRD NRFHHFE G CSCG
Sbjct: 756 LAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCG 815

Query: 833 DYW 835
           DYW
Sbjct: 816 DYW 818



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 158/582 (27%), Positives = 284/582 (48%), Gaps = 28/582 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGK G +  A +LFD++ +R + ++  ++ A+   G+       + R+R  G  V+ F 
Sbjct: 105 MYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFV 164

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++K    +        +H    K G+D   F+ + L+  Y+ C     A  +F+ + 
Sbjct: 165 LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIV 224

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V+W +++S YS +  C E               NA+      Q+C   +      
Sbjct: 225 RK-DAVVWTAMVSCYSEN-DCPE---------------NAFR---CAQSCSLLAISCARQ 264

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +K+  + + +V  AL+ MYA+CG + +A      +   D +  + M++ + Q++
Sbjct: 265 GIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSN 324

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A + F  L  +   P++    + + A   +  L  GK++H +AIK G  SDL +GN
Sbjct: 325 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 384

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LMD YAKC  ++   ++F  +   + +SW TI+ G++Q+    +AL +F  +Q   +  
Sbjct: 385 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 444

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
             +   SVL AC+    +    +IH  I +    +D VI N+++D Y KCG I  +  VF
Sbjct: 445 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF 504

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +  +D++SW ++IS Y  +G A +ALELF  MN++NVES+ IT V+ LS   S  ++ 
Sbjct: 505 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVN 564

Query: 480 KGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMINA 537
            G  L +   I  G        + +V +  R G L+ A +    + +    ++W +++++
Sbjct: 565 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 624

Query: 538 NGLHGRGKVAIDLFYKMEAESFAP-DHITFLAL--LYACSHS 576
             +H    VA+  F   +     P D  T++ L  +YA + S
Sbjct: 625 CIIH--KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGS 664


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/669 (37%), Positives = 389/669 (58%), Gaps = 33/669 (4%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL-QGAGQ 257
           N L+  Y++ G ++E      +L ++D V+WN ++ G+  + L   A++ +  + +    
Sbjct: 76  NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
              +V  +  +  S   G++  GK++H   IK GF S L +G+ L+ MYA   C++   +
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195

Query: 318 VFYQM------------------------------TAQDFISWTTIIAGYAQNNCHLKAL 347
           VFY +                                +D +SW  +I G AQN    +A+
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVY 406
           E FR ++++GL  D    GSVL AC GL  +++ K+IH  IIR    D + + +A++D+Y
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            KC  + Y++ VF+ ++ K+VVSWT+M+  Y   G A EA+++F  M  + ++ D  TL 
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
            A+SA +++S L++G + +G  I  G     +V++SLV +Y +CG +D + ++FN +  +
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           D + WT+M++A    GR    I LF KM      PD +T   ++ ACS +GL+ +G+++ 
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
           ++M  +Y + P   HY+C++DL  R+  LEEA +F+  M   P A  W  LL ACR   N
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555

Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            E+G+  A+ L+ELDP +P  Y L+S+++A+  KW  V Q+R  MR   +KK PG SWI+
Sbjct: 556 LEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615

Query: 707 IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
              K+HSF A D+S    D+IY KL E+  K+  + GY   T FV H+VEE  KV+ML  
Sbjct: 616 WKGKLHSFSADDESSPYLDQIYAKLEELNNKI-IDNGYKPDTSFVHHDVEEAVKVKMLNY 674

Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
           HSERLAIA+G++    G  IR+ KNLRVCVDCH+  K +S + GRE++VRDA RFH F+ 
Sbjct: 675 HSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 734

Query: 827 GVCSCGDYW 835
           G CSCGD+W
Sbjct: 735 GTCSCGDFW 743



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 161/562 (28%), Positives = 275/562 (48%), Gaps = 73/562 (12%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           IHG +++       F+ N++V  YA       AR++FDR+  + ++  WN+++ AYS +G
Sbjct: 28  IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRI-PQPNLFSWNNLLLAYSKAG 86

Query: 140 QCLEALGLFREMQR------------------VGLVTNAY--------------TFVAAL 167
              E    F ++                    VG    AY              T +  L
Sbjct: 87  LISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTML 146

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN---- 223
           +    +   +LG +IH   +K G    + V + L+ MYA  G +++A  V Y L++    
Sbjct: 147 KLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTV 206

Query: 224 --------------------------KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
                                     KDSVSW +M+ G  QN L  +A++ FRE++  G 
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGL 266

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           K DQ    + + A G LG +  GK++HA  I+  F   + +G+ L+DMY KC C++Y   
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT 326

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF +M  ++ +SWT ++ GY Q     +A+++F  +Q  G+D D   +G  + AC+ +  
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386

Query: 378 MSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           + +  + HG  I  GL   V + N++V +YGKCG+ID S  +F  +  +D VSWT+M+S+
Sbjct: 387 LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA 446

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           Y   G A E ++LF  M +  ++ D +TL   +SA S   +++KG+     +  + + + 
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE-YGIV 505

Query: 497 GSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR---GKVAIDL 550
            S+   S ++D+++R G L+ A +  N +    D I WT++++A    G    GK A + 
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAES 565

Query: 551 FYKMEAESFAPDHITFLALLYA 572
              +E +   P   T L+ +YA
Sbjct: 566 L--IELDPHHPAGYTLLSSIYA 585



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/526 (25%), Positives = 250/526 (47%), Gaps = 54/526 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY-SRMRVLGISVDAFT 60
           Y K G + + E  F+K+  R   TWN ++  Y  +G     ++ Y + MR    ++   T
Sbjct: 82  YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF---- 116
              ++K  +    +  G +IHG V+K G++S   + + L+ MYA       A+++F    
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201

Query: 117 DR-------------------------MGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
           DR                          G ++D V W ++I   + +G   EA+  FREM
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
           +  GL  + Y F + L AC        G +IHA  +++     +YV +ALI MY +C  +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  V  +++ K+ VSW +M+ G+ Q     +A++ F ++Q +G  PD      A+SA 
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             + +L  G + H  AI  G +  + + N+L+ +Y KC  ++   R+F +M  +D +SWT
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
            +++ YAQ    ++ ++LF  +   GL  D + +  V+ ACS    + + +     +   
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMT-- 499

Query: 392 GLSDLVILNAI------VDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNGLAN 444
             S+  I+ +I      +D++ + G ++ +      +    D + WT+++S+  + G   
Sbjct: 500 --SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG--- 554

Query: 445 EALELFYLMNEANVESDS-----ITLVSALSAA----SSLSILKKG 481
             LE+     E+ +E D       TL+S++ A+     S++ L++G
Sbjct: 555 -NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRG 599



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 175/427 (40%), Gaps = 73/427 (17%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K +H   I+     +  + N ++  YA      Y  RVF ++   +  SW  ++  Y++ 
Sbjct: 26  KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85

Query: 341 NCHLKALELFRTVQ-LEGLDADVMIIGSVLMACSG------------------------- 374
               +    F  +   +G+  +V+I G  L    G                         
Sbjct: 86  GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145

Query: 375 LKCMSQT------KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIES--- 424
           LK  S        K+IHG +I+ G  S L++ + ++ +Y   G I  ++ VF  ++    
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205

Query: 425 ---------------------------KDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
                                      KD VSW +MI     NGLA EA+E F  M    
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           ++ D     S L A   L  + +GK+++  IIR  F     V S+L+DMY +C  L  A 
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            VF+ ++ K+++ WT+M+   G  GR + A+ +F  M+     PDH T    + AC++  
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYAC----LVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
            + EG +F         +     HY      LV L G+   ++++ +    M +   A  
Sbjct: 386 SLEEGSQF-----HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVS 439

Query: 634 WCALLGA 640
           W A++ A
Sbjct: 440 WTAMVSA 446



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 3/236 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  A+ +FD++ Q+ V +W AM+  Y   G     ++ +  M+  GI  D +T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I ACA +  L+ G++ HG  +  G      + NSLV +Y KC D   + +LF+ M 
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V W +++SAY+  G+ +E + LF +M + GL  +  T    + AC  +     G 
Sbjct: 434 VR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
                 T + G    +   + +I +++R G++ EA   +  +    D++ W ++L+
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 262/730 (35%), Positives = 406/730 (55%), Gaps = 5/730 (0%)

Query: 24  FTWNAMLGAYVSNGEPLRVLETYSRM--RVLGISVDAFTFPCVIKACAMLKDLDCGAKIH 81
             WN ++      G+    L  Y +M         D+ TFP V+K+CA L  +  G  +H
Sbjct: 110 LPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVH 169

Query: 82  GLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQC 141
                 G D   F+ ++L+ MYA       ARQ+FD M E+ D VLWN ++  Y  +G  
Sbjct: 170 RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAER-DCVLWNVMMDGYVKAGSV 228

Query: 142 LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANAL 201
             A+ LF +M+  G   N  T    L      S    G+++H   VK G   +V VAN L
Sbjct: 229 SSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTL 288

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           ++MYA+C  + +   +   +   D V+WN M++G VQN    +A+  F ++Q +G +PD 
Sbjct: 289 VSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDS 348

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
           V  V+ + A   L     GKELH Y ++     D+ + + L+D+Y KC  V     V+  
Sbjct: 349 VTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDS 408

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
             A D +  +T+I+GY  N    +A+++FR +  +G+  + + I SVL AC+ +  M   
Sbjct: 409 SKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLG 468

Query: 382 KEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
           +E+H Y ++        + +A++D+Y KCG +D S  +F  I +KD V+W SMISS+  N
Sbjct: 469 QELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQN 528

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
           G   EAL LF  M    V+  ++T+ S LSA +SL  +  GKE++G +I+     +    
Sbjct: 529 GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAE 588

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           S+L+DMY +CG L+ A++VF  +  K+ + W S+I + G +G  K ++ L   M+ E F 
Sbjct: 589 SALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFK 648

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
            DH+TFLAL+ AC+H+G + EG +    M  +YQ+ P  EH+AC+VDL  RA  L++A +
Sbjct: 649 ADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAME 708

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
            +  M  +P A +W ALL ACRVH N EL EI +++L +LDP N G YVL+SN+ A + +
Sbjct: 709 LIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGR 768

Query: 681 WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
           W  V +VR  M+ + ++K PG SW+++ N  H F+A DKSH +S++IY  L  I  +L R
Sbjct: 769 WDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLEL-R 827

Query: 741 EGGYVAQTQF 750
           E GY+     
Sbjct: 828 EEGYIPMPDL 837



 Score =  298 bits (764), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 177/549 (32%), Positives = 303/549 (55%), Gaps = 14/549 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   G + DA Q+FD +++R    WN M+  YV  G     +E +  MR  G   +  T
Sbjct: 190 MYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFAT 249

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             C +   A   DL  G ++H L +K G +S   + N+LV+MYAKC       +LF  M 
Sbjct: 250 LACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLM- 308

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            ++D+V WN +IS    +G   +AL LF +MQ+ G+  ++ T V+ L A  D +    G 
Sbjct: 309 PRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGK 368

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   V++  ++ V++ +AL+ +Y +C  +  A  V    +  D V  ++M++G+V N 
Sbjct: 369 ELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNG 428

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +  +A++ FR L   G +P+ V   + + A   +  +  G+ELH+YA+K  +     + +
Sbjct: 429 MSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVES 488

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LMDMYAKC  ++    +F +++A+D ++W ++I+ +AQN    +AL LFR + +EG+  
Sbjct: 489 ALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKY 548

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
             + I SVL AC+ L  +   KEIHG +I+  + +DL   +A++D+YGKCGN++++  VF
Sbjct: 549 SNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVF 608

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           ES+  K+ VSW S+I+SY   GL  E++ L   M E   ++D +T ++ +SA +      
Sbjct: 609 ESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACA-----H 663

Query: 480 KGKELNGFIIRKGFNLEGSVASS------LVDMYARCGALDIANKVFNCVQTK-DLILWT 532
            G+   G  + +    E  +A        +VD+Y+R G LD A ++   +  K D  +W 
Sbjct: 664 AGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWG 723

Query: 533 SMINANGLH 541
           ++++A  +H
Sbjct: 724 ALLHACRVH 732



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 171/570 (30%), Positives = 313/570 (54%), Gaps = 9/570 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-LVAMYAKCYDFRKARQLFDRM--G 120
           V++ C     L  G ++HG  +  G  +TD  + + LV MY     FR A  +F  +  G
Sbjct: 45  VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACEDSSFETL 178
                + WN +I   + +G    AL  + +M       + +++TF   +++C       L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  +H      G +  ++V +ALI MYA  G + +A  V   +  +D V WN M+ G+V+
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                 A++ F +++ +G +P+       +S S    +L  G +LH  A+K G  S++ +
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAV 284

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            NTL+ MYAKC C++   ++F  M   D ++W  +I+G  QN    +AL LF  +Q  G+
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D + + S+L A + L   +Q KE+HGYI+R  +  D+ +++A+VD+Y KC  +  +++
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           V++S ++ DVV  ++MIS YV NG++ EA+++F  + E  +  +++ + S L A +S++ 
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA 464

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           +K G+EL+ + ++  +     V S+L+DMYA+CG LD+++ +F+ +  KD + W SMI++
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISS 524

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLD 596
              +G  + A++LF +M  E     ++T  ++L AC+    I  GK+    +++   + D
Sbjct: 525 FAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRAD 584

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
            + E  + L+D+ G+  +LE A++   SM 
Sbjct: 585 LFAE--SALIDMYGKCGNLEWAHRVFESMP 612



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 212/430 (49%), Gaps = 7/430 (1%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
            +A L+ C   S  +LG+++H   V +G       +   L+ MY    +  +A  V   L
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 222 ENKD---SVSWNSMLTGFVQNDLYCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGN 276
                  ++ WN ++ G      Y  A+ F+ ++    +   PD       V +   LG 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           +  G+ +H  A   G   D+ +G+ L+ MYA    +    +VF  M  +D + W  ++ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SD 395
           Y +      A+ELF  ++  G + +   +   L   +    +    ++H   ++ GL S+
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + + N +V +Y KC  +D    +F  +   D+V+W  MIS  V NG  ++AL LF  M +
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
           + +  DS+TLVS L A + L+   +GKEL+G+I+R   +++  + S+LVD+Y +C A+ +
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRM 401

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A  V++  +  D+++ ++MI+   L+G  + A+ +F  +  +   P+ +   ++L AC+ 
Sbjct: 402 AQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACAS 461

Query: 576 SGLINEGKKF 585
              +  G++ 
Sbjct: 462 MAAMKLGQEL 471


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 278/837 (33%), Positives = 459/837 (54%), Gaps = 25/837 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  V  A  LFD++  R V +W  +L A+  N      L+ +  M   G   + FT
Sbjct: 60  LYAKCFGVGQARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFT 119

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               +++C+ L + + GAKIH  V+K G +    +  +LV +Y KC    +  +L   + 
Sbjct: 120 LSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVK 179

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  DVV W ++IS+   + +  EAL L+ +M   G+  N +TFV  L      SF  LG 
Sbjct: 180 DG-DVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGM---PSFLGLGK 235

Query: 181 E----IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
                +H+  +  G  + + +  A+I MYA+C +M +A  V  Q    D   W S+++GF
Sbjct: 236 GYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGF 295

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           VQN    +A+    +++ +G  P+     + ++AS  + +L  G++ H+  I  G   D+
Sbjct: 296 VQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDI 355

Query: 297 QIGNTLMDMYAKCCCVNYMG-RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            +GN L+DMY KC      G + F  +   + ISWT++IAG+A++    ++++LF  +Q 
Sbjct: 356 YVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQA 415

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
            G+  +   + ++L ACS +K + QTK++HGYII+  +  D+ + NA+VD Y   G  D 
Sbjct: 416 AGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADE 475

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           + +V   +  +D++++T++ +     G    AL +   M    V+ D  +L S +SAA+ 
Sbjct: 476 AWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAG 535

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L I++ GK+L+ +  + GF    SV++SLV  Y++CG++  A +VF  +   D + W  +
Sbjct: 536 LGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGL 595

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I+    +G    A+  F  M      PD +TFL+L++ACS   L+N+G  +   M   Y 
Sbjct: 596 ISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYH 655

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  +HY CLVDLLGR   LEEA   + +M  +P + ++  LL AC +H N  LGE +A
Sbjct: 656 ITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMA 715

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           ++ LELDP +P  Y+L+++++  +      ++ R  MR  GL+++P   W+E+ +KI+ F
Sbjct: 716 RRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSKIYLF 775

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
            AR+K    +DEI +KL  +  +++   GY  Q        E E+K   LY HSE+LA+A
Sbjct: 776 SAREK--IGNDEINEKLESLITEIKNR-GYPYQ--------ESEDK---LY-HSEQLALA 820

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           +GVL     + IRI KN  +C  CHSF  L+++   RE++VRD  RFH F+ G CSC
Sbjct: 821 FGVLSVPTLAPIRINKNSLICTHCHSFIMLLTQFVDREIIVRDRKRFHVFKDGQCSC 877



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 170/611 (27%), Positives = 303/611 (49%), Gaps = 17/611 (2%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           GA +H  ++K G     ++ N+L+ +YAKC+   +AR LFD M  + DVV W +++SA++
Sbjct: 35  GACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHR-DVVSWTTLLSAHT 93

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +    EAL LF  M   G   N +T  +AL++C        G +IHA+ VK G  L   
Sbjct: 94  RNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHV 153

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           +   L+ +Y +C    E   +L  +++ D VSW +M++  V+   + +A+Q + ++  AG
Sbjct: 154 LGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAG 213

Query: 257 QKPDQVCTVNAVSASGRLG-NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
             P++   V  +     LG     GK LH+  I  G   +L +   ++ MYAKC  +   
Sbjct: 214 IYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDA 273

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
            +V  Q    D   WT+II+G+ QN+   +A+     ++L G+  +     S+L A S +
Sbjct: 274 IKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSV 333

Query: 376 KCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR-NVFESIESKDVVSWTSM 433
             +   ++ H  +I  GL  D+ + NA+VD+Y KC +   +    F  I   +V+SWTS+
Sbjct: 334 LSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSL 393

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I+ +  +G   E+++LF  M  A V+ +S TL + L A S +  + + K+L+G+II+   
Sbjct: 394 IAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQV 453

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
           +++ +V ++LVD YA  G  D A  V   +  +D+I +T++       G  ++A+ +   
Sbjct: 454 DIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITH 513

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH----YACLVDLL 609
           M  +    D  +  + + A +  G++  GK+    + C Y      E        LV   
Sbjct: 514 MCNDEVKMDEFSLASFISAAAGLGIMETGKQ----LHC-YSFKSGFERCNSVSNSLVHSY 568

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE-IVAKKLLELDPGNPGNY 668
            +   + +AY+  + +  EP    W  L+    + SN  + + + A   + L    P + 
Sbjct: 569 SKCGSMRDAYRVFKDIT-EPDRVSWNGLISG--LASNGLISDALSAFDDMRLAGVKPDSV 625

Query: 669 VLISNVFAASR 679
             +S +FA S+
Sbjct: 626 TFLSLIFACSQ 636



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 216/427 (50%), Gaps = 4/427 (0%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           T +  L  C   + +  G  +H+  +K G    +Y++N L+ +YA+C  + +A  +  ++
Sbjct: 19  TCLQVLSLCNSQTLKE-GACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEM 77

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
            ++D VSW ++L+   +N  + +A+Q F  + G+GQ P++    +A+ +   LG    G 
Sbjct: 78  PHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGA 137

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           ++HA  +K G   +  +G TL+D+Y KC C     ++   +   D +SWTT+I+   + +
Sbjct: 138 KIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETS 197

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC-MSQTKEIHGYIIRKGLS-DLVIL 399
              +AL+L+  +   G+  +      +L   S L       K +H  +I  G+  +L++ 
Sbjct: 198 KWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLK 257

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
            AI+ +Y KC  ++ +  V +     DV  WTS+IS +V N    EA+     M  + + 
Sbjct: 258 TAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGIL 317

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN-K 518
            ++ T  S L+A+SS+  L+ G++ +  +I  G   +  V ++LVDMY +C        K
Sbjct: 318 PNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVK 377

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
            F  +   ++I WTS+I     HG  + ++ LF +M+A    P+  T   +L ACS    
Sbjct: 378 AFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKS 437

Query: 579 INEGKKF 585
           I + KK 
Sbjct: 438 IIQTKKL 444


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/838 (31%), Positives = 466/838 (55%), Gaps = 13/838 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA  +F  +  + V +WNAM+  Y  +G     ++ + +M+  G+  +  +
Sbjct: 95  MYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNS 154

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ AC     L+ G +IH  + K GY+S   +  +L+ MY KC     AR++F+ M 
Sbjct: 155 FISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMR 214

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +VV W ++IS Y   G   EA  LF+++ R G   N  +F + L AC + +    G+
Sbjct: 215 ER-NVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGL 273

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA   ++G   +V V NALI+MYARCG +  A  V   L + + VSWN+M+ G+ +  
Sbjct: 274 KLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGF 333

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +  +A + FR++Q  G +PD+    + ++      +L  GKELH+  ++  + +D+ +  
Sbjct: 334 ME-EAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVAT 392

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYAKC  +    +VF QM  ++ +SW   IA   ++    +A ++F+ ++ + +  
Sbjct: 393 ALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIP 452

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D +   ++L +C+  +   + + IHG I + G LS+ ++ NA++ +YG+CG +  +R VF
Sbjct: 453 DHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVF 512

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I  +D+ SW +MI++YV +G    A +LF        + D  T ++ L A ++L  L 
Sbjct: 513 YRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLD 572

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G++++G + + G   +  + ++L+ MY++CG+L  A  VF  VQ KD++ W +M+ A  
Sbjct: 573 AGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYN 632

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
               G+ A+ LF +M  E   PD  T+ ++L AC+  G I  GKKF   ++ +  ++   
Sbjct: 633 HSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLK-EAAMETDT 691

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            HYAC+V  LGRA+ L+EA +F+  +  E  A +W +LL ACR+H N  L E   + LL+
Sbjct: 692 RHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHLLD 751

Query: 660 LDP-GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           +    +P     + N++AA+ +W+DV  ++  MR +GL   P S  IE+ ++ H+F+   
Sbjct: 752 VKAQSSPAVCEQLMNIYAAAGRWEDVSVIKATMREAGL-LAPKSCTIEVNSEFHTFMT-- 808

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGH-SERLAIAYGV 777
              S    +  K+ E+  K+  + G++    +  ++  E+E+   L+ H  E LA+AYG+
Sbjct: 809 NHFSPQIGVEDKIEELVWKM-MDKGFLLDPHYAPNDSREKER---LFSHCPELLAVAYGL 864

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             +  G L+R   +  V    H   K +S+ + R + VRD N FH+F+ G+CSCGDYW
Sbjct: 865 EHTPPGVLVRCVTDSPVTDPSHRMLKFISKAYNRGIFVRDPNCFHNFKDGICSCGDYW 922



 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 187/628 (29%), Positives = 329/628 (52%), Gaps = 6/628 (0%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G+  +   +   ++ C   K L  G K+H  +    ++   ++ N L++MY+KC     A
Sbjct: 46  GVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDA 105

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
             +F  M E +DVV WN++IS Y+  G+  EA+ LF +MQR GL  N  +F++ L AC+ 
Sbjct: 106 NNVFQSM-EDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQT 164

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
                 G +IH+   K+G    V V+ ALI MY +CG +  A  V  ++  ++ VSW +M
Sbjct: 165 PIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAM 224

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           ++G+VQ+    +A   F++L  +G +P++V   + + A     +L  G +LHAY  + G 
Sbjct: 225 ISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGL 284

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
             ++ +GN L+ MYA+C  +    +VF  + + + +SW  +IAGY +     +A  LFR 
Sbjct: 285 EQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGFME-EAFRLFRD 343

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGN 411
           +Q +G   D     S+L  C+    +++ KE+H  I+R    +D+ +  A++ +Y KCG+
Sbjct: 344 MQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGS 403

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           ++ +R VF  +  K+ VSW + I+    +G   EA ++F  M   +V  D +T ++ L++
Sbjct: 404 LEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNS 463

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            +S    ++G+ ++G I + G      VA++L+ MY RCG L  A +VF  ++ +DL  W
Sbjct: 464 CTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSW 523

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            +MI A   HG    A DLF K ++E    D  TF+ +L A ++   ++ G+K   ++  
Sbjct: 524 NAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVE- 582

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
              L+        L+ +  +   L +AY   +++Q E     W A+L A   HS+     
Sbjct: 583 KAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQ-EKDVVCWNAMLAAYN-HSDHGQDA 640

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASR 679
           +   + + L+  NP +    S + A +R
Sbjct: 641 LKLFQQMRLEGVNPDSATYTSVLNACAR 668



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 133/258 (51%), Gaps = 14/258 (5%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L +GK+++  +    F  +  + + L+ MY++CG+++ AN VF  ++ KD++ W +MI+ 
Sbjct: 67  LAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISG 126

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLD 596
             LHGRG+ A+DLFY+M+ E   P+  +F+++L AC    ++  G++    I +  Y+ D
Sbjct: 127 YALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESD 186

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
                   L+++  +   LE A +    M+ E     W A++     H + +   ++ +K
Sbjct: 187 --VNVSTALINMYCKCGSLELARKVFNEMR-ERNVVSWTAMISGYVQHGDSKEAFVLFQK 243

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQ---VRMRMRGSGLKKTPGSSWIEIGNKIHS 713
           L+    G   N V  +++  A     D+EQ   +   ++ +GL++      + +GN + S
Sbjct: 244 LIR--SGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQE-----VLVGNALIS 296

Query: 714 FIARDKSHSESDEIYKKL 731
             AR  S + + +++  L
Sbjct: 297 MYARCGSLANARQVFDNL 314


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 253/693 (36%), Positives = 406/693 (58%), Gaps = 39/693 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           + HA  +++G     Y A+ L A+ A      +  A  V  ++   +S +WN+++  +  
Sbjct: 49  QTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYAS 108

Query: 239 N-DLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             D  C    F   +    Q  P++      + A+  + +L  G+ LH  AIK    SD+
Sbjct: 109 GPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDV 168

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N+L+  Y  C  ++   +VF  +  +D +SW ++I G+ Q     KALELF+ ++ E
Sbjct: 169 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 228

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
            + A  + +  VL AC+ ++ +   + +  YI    ++ +L + NA++D+Y KCG+I+ +
Sbjct: 229 DVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 288

Query: 416 RNVFESIESKDVVSWTSM-------------------------------ISSYVHNGLAN 444
           + +F+++E KD V+WT+M                               IS+Y  NG  N
Sbjct: 289 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPN 348

Query: 445 EALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
           EAL +F+ L  + N++ + ITLVS LSA + +  L+ G+ ++ +I + G  +   V S+L
Sbjct: 349 EALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSAL 408

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           + MY++CG L+ A +VFN V+ +D+ +W++MI    +HG G  A+D+FYKM+  +  P+ 
Sbjct: 409 IHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNG 468

Query: 564 ITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
           +TF  +  ACSH+GL++E +     M   Y + P  +HYAC+VD+LGR+ +LE+A +F+ 
Sbjct: 469 VTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIE 528

Query: 624 SMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKD 683
           +M I P+  VW ALLGAC++H+N  L E+   +LLEL+P N G +VL+SN++A S KW +
Sbjct: 529 AMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDN 588

Query: 684 VEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGG 743
           V ++R  MR +GLKK PG S IEI   IH F++ D +H  S+++Y KL E+ EKL +  G
Sbjct: 589 VSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKL-KSNG 647

Query: 744 YVAQTQFVLHNVEEEE-KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFC 802
           Y  +   VL  +EEEE K Q L  HSE+LAI YG++ +     IR+ KNLR+C DCH+  
Sbjct: 648 YEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVA 707

Query: 803 KLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           KL+S+L+ RE++VRD  RFHHF  G CSC D+W
Sbjct: 708 KLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 255/524 (48%), Gaps = 45/524 (8%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA--KCYDFRKARQLFDRMGE 121
           +I  C+ L+ L    + H  +++ G  S  +  + L A+ A         AR++FD + +
Sbjct: 37  LIDRCSSLRQLK---QTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQ 93

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACEDSSFETLG 179
                 WN++I AY++    + ++  F +M         N YTF   ++A  + S  +LG
Sbjct: 94  PNSFT-WNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLG 152

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   +KS     V+VAN+LI  Y  CG +  A  V   ++ KD VSWNSM+ GFVQ 
Sbjct: 153 QSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 212

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               KA++ F++++    K   V  V  +SA  ++ +L  G+ + +Y  +     +L + 
Sbjct: 213 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLA 272

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA--------------------- 338
           N ++DMY KC  +    R+F  M  +D ++WTT++ GYA                     
Sbjct: 273 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIV 332

Query: 339 ----------QNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
                     QN    +AL +F  +QL+  +  + + + S L AC+ +  +   + IH Y
Sbjct: 333 AWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSY 392

Query: 388 IIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           I + G+  +  + +A++ +Y KCG+++ +R VF S+E +DV  W++MI     +G  +EA
Sbjct: 393 IKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEA 452

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL--EGSVASSLV 504
           +++FY M EANV+ + +T  +   A S   ++ + + L  + +   + +  E    + +V
Sbjct: 453 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL-FYKMESSYGIVPEDKHYACIV 511

Query: 505 DMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKVA 547
           D+  R G L+ A K    +       +W +++ A  +H    +A
Sbjct: 512 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLA 555



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 225/476 (47%), Gaps = 49/476 (10%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS---VDAFTFPCVIKA 67
           A ++FD++ Q   FTWN ++ AY S  +P+  +  +  M V   S    + +TFP +IKA
Sbjct: 84  ARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDM-VSSESQCYPNKYTFPFLIKA 142

Query: 68  CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVL 127
            A +  L  G  +HG+ +K    S  F+ NSL+  Y  C D   A ++F  + EK DVV 
Sbjct: 143 AAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK-DVVS 201

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           WNS+I+ +   G   +AL LF++M+   +  +  T V  L AC        G  + +   
Sbjct: 202 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIE 261

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV---------- 237
           ++  N+ + +ANA++ MY +CG + +A  +   +E KD+V+W +ML G+           
Sbjct: 262 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 321

Query: 238 ---------------------QNDLYCKAMQFFRELQ-GAGQKPDQVCTVNAVSASGRLG 275
                                QN    +A+  F ELQ     K +Q+  V+ +SA  ++G
Sbjct: 322 VLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVG 381

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            L  G+ +H+Y  K G   +  + + L+ MY+KC  +     VF  +  +D   W+ +I 
Sbjct: 382 ALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIG 441

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           G A + C  +A+++F  +Q   +  + +   +V  ACS    + + +     +  K  S 
Sbjct: 442 GLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES----LFYKMESS 497

Query: 396 LVILNA------IVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS-YVHNGLA 443
             I+        IVDV G+ G ++ +    E++      S W +++ +  +H  L+
Sbjct: 498 YGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLS 553



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 188/415 (45%), Gaps = 50/415 (12%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG +  A ++F  + ++ V +WN+M+  +V  G P + LE + +M    +     T 
Sbjct: 178 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 237

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA ++DL+ G ++   + +   +    + N+++ MY KC     A++LFD M E
Sbjct: 238 VGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 297

Query: 122 KE------------------------------DVVLWNSIISAYSASGQCLEALGLFREM 151
           K+                              D+V WN++ISAY  +G+  EAL +F E+
Sbjct: 298 KDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHEL 357

Query: 152 Q-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           Q +  +  N  T V+ L AC       LG  IH+   K+G  +  YV +ALI MY++CG 
Sbjct: 358 QLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGD 417

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           + +A  V   +E +D   W++M+ G   +    +A+  F ++Q A  KP+ V   N   A
Sbjct: 418 LEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCA 477

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS- 329
               G L++  E   Y ++  +      G    D +   C V+ +GR  Y   A  FI  
Sbjct: 478 CSHTG-LVDEAESLFYKMESSY------GIVPEDKHY-ACIVDVLGRSGYLEKAVKFIEA 529

Query: 330 ---------WTTII-AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
                    W  ++ A     N  L  +   R ++LE  +    ++ S + A SG
Sbjct: 530 MPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSG 584



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 221/464 (47%), Gaps = 52/464 (11%)

Query: 259 PDQVCTVN-----AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA--KCCC 311
           P+Q  T N      +S   R  +L   K+ HA+ I+ G  SD    + L  + A      
Sbjct: 21  PNQPTTNNERSRHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFAS 80

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNN---CHLKALELFRTVQLEGLDADVMIIGSV 368
           + Y  +VF ++   +  +W T+I  YA      C + A     + + +    +      +
Sbjct: 81  LEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCY-PNKYTFPFL 139

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           + A + +  +S  + +HG  I+  + SD+ + N+++  Y  CG++D +  VF +I+ KDV
Sbjct: 140 IKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 199

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           VSW SMI+ +V  G  ++ALELF  M   +V++  +T+V  LSA + +  L+ G+ +  +
Sbjct: 200 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSY 259

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL------- 540
           I     N+  ++A++++DMY +CG+++ A ++F+ ++ KD + WT+M++   +       
Sbjct: 260 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 319

Query: 541 ------------------------HGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACSH 575
                                   +G+   A+ +F++++ + +   + IT ++ L AC+ 
Sbjct: 320 REVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQ 379

Query: 576 SGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
            G +  G+     I +   +++ +    + L+ +  +   LE+A +   S++ +    VW
Sbjct: 380 VGALELGRWIHSYIKKNGIKMNFYVT--SALIHMYSKCGDLEKAREVFNSVE-KRDVFVW 436

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGN-PGNYVLISNVFAA 677
            A++G   +H     G        ++   N   N V  +NVF A
Sbjct: 437 SAMIGGLAMHG---CGSEAVDMFYKMQEANVKPNGVTFTNVFCA 477



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 33/202 (16%)

Query: 1   MYGKCGSVLDAEQLFD-------------------------------KVSQRTVFTWNAM 29
           MY KCGS+ DA++LFD                                + ++ +  WNA+
Sbjct: 278 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNAL 337

Query: 30  LGAYVSNGEPLRVLETYSRMRVL-GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
           + AY  NG+P   L  +  +++   I ++  T    + ACA +  L+ G  IH  + K G
Sbjct: 338 ISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNG 397

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
                ++ ++L+ MY+KC D  KAR++F+ + EK DV +W+++I   +  G   EA+ +F
Sbjct: 398 IKMNFYVTSALIHMYSKCGDLEKAREVFNSV-EKRDVFVWSAMIGGLAMHGCGSEAVDMF 456

Query: 149 REMQRVGLVTNAYTFVAALQAC 170
            +MQ   +  N  TF     AC
Sbjct: 457 YKMQEANVKPNGVTFTNVFCAC 478



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F+ V +R VF W+AM+G    +G     ++ + +M+   +  +  T
Sbjct: 411 MYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVT 470

Query: 61  FPCVIKACA 69
           F  V  AC+
Sbjct: 471 FTNVFCACS 479


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 269/782 (34%), Positives = 439/782 (56%), Gaps = 4/782 (0%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D+ ++  +++     +D + G  +H  +LK G     F  N L+  Y        A +L
Sbjct: 1   MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M    + V + ++   +S S Q   A  L   + R G   N + F   L+       
Sbjct: 61  FDEM-PLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDL 119

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
               + +HA   K G     +V  ALI  Y+ CG +  A  V   +  KD VSW  M+  
Sbjct: 120 ADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVAC 179

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           + +N  +  ++  F +++  G +P+      A+ +   L     GK +H  A+K  +  D
Sbjct: 180 YAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRD 239

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQ 354
           L +G  L+++Y K   +    + F +M   D I W+ +I+ YAQ++   +ALELF R  Q
Sbjct: 240 LYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQ 299

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
              +  +     SVL AC+ L  ++   +IH  +++ GL S++ + NA++DVY KCG I+
Sbjct: 300 SSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIE 359

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            S  +F     K+ V+W ++I  YV  G   +AL LF  M   +++   +T  S L A++
Sbjct: 360 NSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASA 419

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           SL  L+ G++++   I+  +N +  VA+SL+DMYA+CG +D A   F+ +  +D + W +
Sbjct: 420 SLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNA 479

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           +I    +HG G  A++LF  M+  +  P+ +TF+ +L ACS++GL+++G+   + M  DY
Sbjct: 480 LICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDY 539

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
            ++P  EHY C+V LLGR+   +EA + +  +  +P+  VW ALLGAC +H N +LG++ 
Sbjct: 540 GIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVC 599

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHS 713
           A+++LE++P +   +VL+SN++A +++W +V  VR  M+   +KK PG SW+E    +H 
Sbjct: 600 AQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHY 659

Query: 714 FIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAI 773
           F   D SH     I+  L  + +K  R+ GYV     VL +VE++EK ++L+ HSERLA+
Sbjct: 660 FTVGDTSHPNIKLIFAMLEWLYKK-TRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLAL 718

Query: 774 AYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
           A+G+++   G  IRI KNLR+CVDCH+  KLVS++  RE+V+RD NRFHHF  GVCSCGD
Sbjct: 719 AFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGD 778

Query: 834 YW 835
           YW
Sbjct: 779 YW 780



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 292/579 (50%), Gaps = 12/579 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G + DA +LFD++      ++  +   +  + +  R      R+   G  V+ F F
Sbjct: 48  YVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVF 107

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++K    +   D    +H  V K G+ +  F+  +L+  Y+ C +   ARQ+FD +  
Sbjct: 108 TTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYF 167

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D+V W  +++ Y+ +    ++L LF +M+ +G   N +T  AAL++C       +G  
Sbjct: 168 K-DMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKS 226

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +K   +  +YV  AL+ +Y + G++ EA     ++   D + W+ M++ + Q+D 
Sbjct: 227 VHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDK 286

Query: 242 YCKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             +A++ F R  Q +   P+     + + A   L  L  G ++H+  +K G  S++ + N
Sbjct: 287 SKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSN 346

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LMD+YAKC  +    ++F   T ++ ++W TII GY Q     KAL LF  +    +  
Sbjct: 347 ALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQP 406

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
             +   SVL A + L  +   ++IH   I+   + D V+ N+++D+Y KCG ID +R  F
Sbjct: 407 TEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTF 466

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + ++ +D VSW ++I  Y  +GL  EAL LF +M ++N + + +T V  LSA S+  +L 
Sbjct: 467 DKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLD 526

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
           KG+     +++  + +E  +   + +V +  R G  D A K+   +     +++W +++ 
Sbjct: 527 KGRAHFKSMLQD-YGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLG 585

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           A  +H     GKV      +ME +  A  H+  L+ +YA
Sbjct: 586 ACVIHKNLDLGKVCAQRVLEMEPQDDAT-HV-LLSNMYA 622



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 156/282 (55%), Gaps = 2/282 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAF 59
           +Y K G + +A+Q F+++ +  +  W+ M+  Y  + +    LE + RMR   + V + F
Sbjct: 249 LYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNF 308

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  V++ACA L  L+ G +IH  VLK G DS  F+ N+L+ +YAKC +   + +LF   
Sbjct: 309 TFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGS 368

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK +V  WN+II  Y   G   +AL LF  M  + +     T+ + L+A         G
Sbjct: 369 TEKNEVA-WNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPG 427

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH+ T+K+  N    VAN+LI MYA+CG++ +A     +++ +D VSWN+++ G+  +
Sbjct: 428 RQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIH 487

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
            L  +A+  F  +Q +  KP+++  V  +SA    G L  G+
Sbjct: 488 GLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGR 529



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 122/236 (51%), Gaps = 5/236 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + ++ +LF   +++    WN ++  YV  G+  + L  +S M  L I     T
Sbjct: 351 VYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVT 410

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V++A A L  L+ G +IH L +K  Y+    + NSL+ MYAKC     AR  FD+M 
Sbjct: 411 YSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKM- 469

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K+D V WN++I  YS  G  +EAL LF  MQ+     N  TFV  L AC ++     G 
Sbjct: 470 DKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKG- 528

Query: 181 EIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
             H  ++     ++  + +   ++ +  R G+  EA  ++ ++  + SV  W ++L
Sbjct: 529 RAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALL 584


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 276/869 (31%), Positives = 448/869 (51%), Gaps = 87/869 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YG+ G VL+A ++FD + +R    WNAM+  YV NG+       +  M    +S      
Sbjct: 106 YGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSS----- 160

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
                                              NS++  Y        AR LF++M E
Sbjct: 161 ----------------------------------WNSMLTGYCHSLQMVDARNLFEKMPE 186

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + ++V W  +IS Y       +A  +F +M R GL+ +   F +AL A +      +   
Sbjct: 187 R-NLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLES 245

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ-LENKDSVSWNSMLTGFVQND 240
           +    +K+G    V +  A++ +Y+R   + + A   ++ +  ++  +W++M+       
Sbjct: 246 LRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGG 305

Query: 241 LYCKAMQFFRELQGAGQKPDQ--VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
               A+  +       + P +   C    ++   + G + + + L     +   VS    
Sbjct: 306 RIDAAIAVYE------RDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVS---- 355

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+  Y +   VN    +F +M  ++ ISW  +IAGYAQN    +AL L + +   G+
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGM 415

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
              +  + S+  ACS +  +    ++H   ++ G   +    NA++ +YGKC N++Y+R 
Sbjct: 416 LPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQ 475

Query: 418 VFESIESKDVVSW-------------------------------TSMISSYVHNGLANEA 446
           VF  + +KD+VSW                               T++IS+Y H   +NEA
Sbjct: 476 VFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEA 535

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           +  F  M   +   +S  L   L    SL   K G++++   I+ G + E  VA++L+ M
Sbjct: 536 MGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISM 595

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y +CG  D + ++F+ ++ +D+  W ++I     HG G+ AI ++  ME+    P+ +TF
Sbjct: 596 YFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTF 654

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           + LL ACSH+GL++EG KF + M  DY L P PEHYAC+VDLLGR   ++ A QF+  M 
Sbjct: 655 VGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMP 714

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           IEP   +W ALLGAC++H N E+G+  A+KL  ++P N GNYV++SN++++   W +V +
Sbjct: 715 IEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAE 774

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR  M+  G+ K PG SW +I +K+HSF+  DK H + +EI   L E+   L +  GYV 
Sbjct: 775 VRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLL-KATGYVP 833

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
            T+FVLH+++EE+K   L  HSE+LA+AY +L + +G  I+I KNLR+C DCH+F K VS
Sbjct: 834 DTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVS 893

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +  R++ +RD NRFHHF  G CSC D+W
Sbjct: 894 HVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 219/471 (46%), Gaps = 45/471 (9%)

Query: 1   MYGKCGSVLD-AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           +Y +  SVLD A + F+ + +R  +TW+ M+ A    G     +  Y R  V  I+    
Sbjct: 268 VYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTA 327

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
               + + C  + D    A+I   + +   +      N+L+  Y +     +A++LFD+M
Sbjct: 328 LITGLAQ-CGRIDD----ARI---LFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKM 379

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + + + W  +I+ Y+ +G+  EALGL +E+ R G++ +  +  +   AC +      G
Sbjct: 380 PFR-NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H+  VK G     +  NALI MY +C  M  A  V  ++  KD VSWNS L   VQN
Sbjct: 439 TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQN 498

Query: 240 DLYCKAMQFF------------------------RELQGAGQK-------PDQVCTVNAV 268
           DL  +A   F                         E  GA +        P+       +
Sbjct: 499 DLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILL 558

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
              G LG    G+++H  AIK G  S+L + N L+ MY KC C +   R+F  M  +D  
Sbjct: 559 GVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSR-RIFDLMEERDIF 617

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           +W TII GYAQ+    +A+++++ ++  G+  + +    +L ACS    + +  +    +
Sbjct: 618 TWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSM 677

Query: 389 IRK-GLSDLVILNA-IVDVYGKCGNIDYSRN-VFESIESKDVVSWTSMISS 436
            +  GL+ L    A +VD+ G+ G++  +   +++     D V W++++ +
Sbjct: 678 SQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 243/524 (46%), Gaps = 58/524 (11%)

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
           +AR++FD M  + D++ WNS+ISAY  +G    A  L+  +    + T A          
Sbjct: 52  EAREVFDAM-PRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILL------- 103

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
             S +  LG  + A  V  G   +  VA NA+I+ Y + G +T A  +   + ++D  SW
Sbjct: 104 --SGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSW 161

Query: 230 NSMLTGFVQN-------------------------------DLYCKAMQFFRELQGAGQK 258
           NSMLTG+  +                               + + KA   F ++   G  
Sbjct: 162 NSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL 221

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV-NYMGR 317
           PDQ    +A+SA   LGNL   + L   A+K GF  D+ IG  ++++Y++   V +   +
Sbjct: 222 PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
            F  M  ++  +W+T+IA  +       A+ ++    ++ +     +I       +GL  
Sbjct: 282 FFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI-------TGLAQ 334

Query: 378 MSQTKEIHGYIIRKGLSDLVIL--NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
             +  +    I+ + + + +++  NA++  Y + G ++ ++ +F+ +  ++ +SW  MI+
Sbjct: 335 CGRIDD--ARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  NG + EAL L   ++ + +     +L S   A S++  L+ G +++   ++ G   
Sbjct: 393 GYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQF 452

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
                ++L+ MY +C  ++ A +VF+ + TKD++ W S + A   +     A + F  M 
Sbjct: 453 NSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM- 511

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
               + D +++  ++ A +H+   NE     + M C+++L   P
Sbjct: 512 ---LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSP 552



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 102/483 (21%), Positives = 213/483 (44%), Gaps = 55/483 (11%)

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
           L+V   +A I    R G++ EA  V   +  +D ++WNSM++ +  N +   A   +  +
Sbjct: 32  LEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI 91

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS------------------ 294
            G   +   +     +S  GRLG +L  + +    +++  V+                  
Sbjct: 92  SGGNMRTGAIL----LSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMAR 147

Query: 295 ---------DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
                    D+   N+++  Y     +     +F +M  ++ +SWT +I+GY +   H K
Sbjct: 148 RLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGK 207

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVD 404
           A ++F  +  EGL  D     S L A  GL  +   + +    ++ G   D+VI  AI++
Sbjct: 208 AWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILN 267

Query: 405 VYGKCGNI-DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           VY +  ++ D +   FES+  ++  +W++MI++  H G  + A+ ++        E D +
Sbjct: 268 VYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY--------ERDPV 319

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIANKVFNC 522
             ++  +A  +  + + G+  +  I+ +       V+ ++L+  Y + G ++ A ++F+ 
Sbjct: 320 KSIACRTALIT-GLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDK 378

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +  ++ I W  MI     +GR + A+ L  ++      P   +  ++ +ACS+   +  G
Sbjct: 379 MPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438

Query: 583 KKFLEI---MRCDYQLDPWPEHYAC--LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
            +   +   + C +        +AC  L+ + G+  ++E A Q    M  +     W + 
Sbjct: 439 TQVHSLAVKVGCQFN------SFACNALITMYGKCRNMEYARQVFSRMVTKDIVS-WNSF 491

Query: 638 LGA 640
           L A
Sbjct: 492 LAA 494


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/843 (32%), Positives = 479/843 (56%), Gaps = 13/843 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CGS++DA+  FD++  +   TW  ++ A+   G+  + L  +  M++ G++     
Sbjct: 42  MYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRN 101

Query: 61  FPCVIKACAMLKDL-DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC+   +L + G +IHG++     +S  ++  +L+ MY KC     AR++FD +
Sbjct: 102 FVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGI 161

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K  VV WN++I+AY+      +A+ +F  M   G+     TF+  L AC  S  + L 
Sbjct: 162 RHKR-VVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDAC--SKLKDLE 218

Query: 180 M-EIHAATVKSGQNLQVY---VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           + ++    V+  ++  ++    A AL+  Y  CG + E A   +     + +   +M+T 
Sbjct: 219 VAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDL-EQAFRAFSRHRLELILATAMITQ 277

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           + Q + + +A++ F+ +   G K D++  +  ++A      L  G+ +H +  +  F   
Sbjct: 278 YTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRH 337

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           +  GN L++MY KC  +     VF  M  +D ISW TIIA + Q++ H +AL L   +QL
Sbjct: 338 VNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQL 397

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
           +G+ AD +   + L  C+  + +++ + IH +I+  G+ +D+++ NAI+D+YG C + D 
Sbjct: 398 DGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDD 457

Query: 415 SRNVFESIESKDVVSWTSMISSYV-HNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           +  VF +++++D VSW +MI++Y     L++EAL LF  M       D I+ V+ALSA +
Sbjct: 458 ASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACA 517

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           + + L +GK L+  I   G     +VA+++++MYA+ G+L +A K+F  +   D+I W  
Sbjct: 518 AQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNG 577

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           MI+A   HG     +  F +M  E   P+ +TF++++ ACSH GL+ +G +    +  D+
Sbjct: 578 MISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDF 637

Query: 594 Q-LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
             + P  EHY C+VDL+ RA  L+ A +F+ +  ++P   +   +LGA +VH + E    
Sbjct: 638 PTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARK 697

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
            A+ L+EL P     YV++SN++    K  +  ++R  M    ++K P  S I +  ++H
Sbjct: 698 SAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVH 757

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLA 772
            F   D +++ + EI ++L  ++ ++ +  GY   T  +LH+V +E+K ++L  HSE+LA
Sbjct: 758 EFFTGDTTNARTPEILEELERLSLEMAK-AGYTPDTTLMLHDVGDEQKKRLLSYHSEKLA 816

Query: 773 IAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           IA+G++ +  G+ +RI KNLRVC DCH+  K +S++ GRE+VVRD++RFHHF+ G CSCG
Sbjct: 817 IAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCG 876

Query: 833 DYW 835
           DYW
Sbjct: 877 DYW 879



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 239/485 (49%), Gaps = 21/485 (4%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L    DS    LG E+HA   KS  +   ++ + L+ MY  CG + +A     ++  +D+
Sbjct: 5   LDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDA 64

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP---DQVCTVNAVSASGRLGNLLNGKEL 283
           ++W  ++    Q     +A+  FR +Q  G  P   + V  + A SA   L  L  G+ +
Sbjct: 65  LTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPEL--LEEGRRI 122

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           H         SD  +  TL+ MY KC  V    +VF  +  +  + W  +I  YAQ + H
Sbjct: 123 HGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHH 182

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK---GLSDLVILN 400
            +A+++F  + LEG+ A+ +    VL ACS LK +   K +   +  +    L D     
Sbjct: 183 EQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFAT 242

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A+V+ YG CG+++ +   F S    +++  T+MI+ Y      +EALELF +M    V+ 
Sbjct: 243 ALVNFYGSCGDLEQAFRAF-SRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKL 301

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D I  ++ L+A S    L++G+ ++GF+    F+   +  ++L++MY +CG+L+ A +VF
Sbjct: 302 DRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVF 361

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
             +Q +D+I W ++I A+G H +   A+ L + M+ +    D I+F+  L  C+ S  + 
Sbjct: 362 RSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALA 421

Query: 581 EGKKFLEI-----MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           +G+          ++ D  LD        ++D+ G     ++A +  R+M+       W 
Sbjct: 422 KGRMIHSWIVESGIKADVMLD------NAILDMYGSCKSTDDASRVFRAMKARDQVS-WN 474

Query: 636 ALLGA 640
           A++ A
Sbjct: 475 AMITA 479



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 183/371 (49%), Gaps = 7/371 (1%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GKE+HA   K        +G+ L+ MY  C  +      F +M  QD ++W  +I  + Q
Sbjct: 17  GKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQ 76

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG-LKCMSQTKEIHGYIIRKGL-SDLV 397
                +AL LFR++QLEG+        +VL ACS   + + + + IHG +    + SD  
Sbjct: 77  IGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHY 136

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           +   ++ +YGKC +++ +R VF+ I  K VV W +MI++Y       +A+++FY M    
Sbjct: 137 VSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEG 196

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN--LEGSVASSLVDMYARCGALDI 515
           V+++ IT +  L A S L  L+  K +   +  +  +   + S A++LV+ Y  CG L+ 
Sbjct: 197 VKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQ 256

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A + F+     +LIL T+MI       R   A++LF  M  E    D I  +A+L ACS 
Sbjct: 257 AFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSG 315

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
              + EG+     MR + + D        L+++ G+   LEEA +  RSMQ       W 
Sbjct: 316 PRGLEEGRMIHGFMR-EIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVIS-WN 373

Query: 636 ALLGACRVHSN 646
            ++ A   HS 
Sbjct: 374 TIIAAHGQHSQ 384



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 11/216 (5%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L  GKE++  I +   +    +   LV MY  CG+L  A   F+ +  +D + W  +I A
Sbjct: 14  LDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRA 73

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS-HSGLINEGKKFLEIMRCDYQLD 596
           +G  G  + A+ LF  M+ E  AP +  F+A+L ACS    L+ EG++   ++R      
Sbjct: 74  HGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAM-- 131

Query: 597 PWPEHY--ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG-EIV 653
              +HY    L+ + G+ + +E+A +    ++ +   E W A++ A     + E   ++ 
Sbjct: 132 -ESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVE-WNAMITAYAQQDHHEQAIQVF 189

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
              LLE   G     +    V  A  K KD+E  ++
Sbjct: 190 YAMLLE---GVKAERITFIGVLDACSKLKDLEVAKL 222


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 276/869 (31%), Positives = 448/869 (51%), Gaps = 87/869 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YG+ G VL+A ++FD + +R    WNAM+  YV NG+       +  M    +S      
Sbjct: 106 YGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSS----- 160

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
                                              NS++  Y        AR LF++M E
Sbjct: 161 ----------------------------------WNSMLTGYCHSLQMVDARNLFEKMPE 186

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + ++V W  +IS Y       +A  +F +M R GL+ +   F +AL A +      +   
Sbjct: 187 R-NLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLES 245

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ-LENKDSVSWNSMLTGFVQND 240
           +    +K+G    V +  A++ +Y+R   + + A   ++ +  ++  +W++M+       
Sbjct: 246 LRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGG 305

Query: 241 LYCKAMQFFRELQGAGQKPDQ--VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
               A+  +       + P +   C    ++   + G + + + L     +   VS    
Sbjct: 306 RIDAAIAVYE------RDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVS---- 355

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+  Y +   VN    +F +M  ++ ISW  +IAGYAQN    +AL L + +   G+
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGM 415

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
              +  + S+  ACS +  +    ++H   ++ G   +    NA++ +YGKC N++Y+R 
Sbjct: 416 LPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQ 475

Query: 418 VFESIESKDVVSW-------------------------------TSMISSYVHNGLANEA 446
           VF  + +KD+VSW                               T++IS+Y H   +NEA
Sbjct: 476 VFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEA 535

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           +  F  M   +   +S  L   L    SL   K G++++   I+ G + E  VA++L+ M
Sbjct: 536 MGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISM 595

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y +CG  D + ++F+ ++ +D+  W ++I     HG G+ AI ++  ME+    P+ +TF
Sbjct: 596 YFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTF 654

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           + LL ACSH+GL++EG KF + M  DY L P PEHYAC+VDLLGR   ++ A QF+  M 
Sbjct: 655 VGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMP 714

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           IEP   +W ALLGAC++H N E+G+  A+KL  ++P N GNYV++SN++++   W +V +
Sbjct: 715 IEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAE 774

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR  M+  G+ K PG SW +I +K+HSF+  DK H + +EI   L E+   L +  GYV 
Sbjct: 775 VRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLL-KATGYVP 833

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
            T+FVLH+++EE+K   L  HSE+LA+AY +L + +G  I+I KNLR+C DCH+F K VS
Sbjct: 834 DTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVS 893

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +  R++ +RD NRFHHF  G CSC D+W
Sbjct: 894 HVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 219/471 (46%), Gaps = 45/471 (9%)

Query: 1   MYGKCGSVLD-AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           +Y +  SVLD A + F+ + +R  +TW+ M+ A    G     +  Y R  V  I+    
Sbjct: 268 VYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTA 327

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
               + + C  + D    A+I   + +   +      N+L+  Y +     +A++LFD+M
Sbjct: 328 LITGLAQ-CGRIDD----ARI---LFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKM 379

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + + + W  +I+ Y+ +G+  EALGL +E+ R G++ +  +  +   AC +      G
Sbjct: 380 PFR-NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H+  VK G     +  NALI MY +C  M  A  V  ++  KD VSWNS L   VQN
Sbjct: 439 TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQN 498

Query: 240 DLYCKAMQFF------------------------RELQGAGQK-------PDQVCTVNAV 268
           DL  +A   F                         E  GA +        P+       +
Sbjct: 499 DLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILL 558

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
              G LG    G+++H  AIK G  S+L + N L+ MY KC C +   R+F  M  +D  
Sbjct: 559 GVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSR-RIFDLMEERDIF 617

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           +W TII GYAQ+    +A+++++ ++  G+  + +    +L ACS    + +  +    +
Sbjct: 618 TWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSM 677

Query: 389 IRK-GLSDLVILNA-IVDVYGKCGNIDYSRN-VFESIESKDVVSWTSMISS 436
            +  GL+ L    A +VD+ G+ G++  +   +++     D V W++++ +
Sbjct: 678 SQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 243/524 (46%), Gaps = 58/524 (11%)

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
           +AR++FD M  + D++ WNS+ISAY  +G    A  L+  +    + T A          
Sbjct: 52  EAREVFDAM-PRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILL------- 103

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
             S +  LG  + A  V  G   +  VA NA+I+ Y + G +T A  +   + ++D  SW
Sbjct: 104 --SGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSW 161

Query: 230 NSMLTGFVQN-------------------------------DLYCKAMQFFRELQGAGQK 258
           NSMLTG+  +                               + + KA   F ++   G  
Sbjct: 162 NSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL 221

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV-NYMGR 317
           PDQ    +A+SA   LGNL   + L   A+K GF  D+ IG  ++++Y++   V +   +
Sbjct: 222 PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
            F  M  ++  +W+T+IA  +       A+ ++    ++ +     +I       +GL  
Sbjct: 282 FFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI-------TGLAQ 334

Query: 378 MSQTKEIHGYIIRKGLSDLVIL--NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
             +  +    I+ + + + +++  NA++  Y + G ++ ++ +F+ +  ++ +SW  MI+
Sbjct: 335 CGRIDD--ARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  NG + EAL L   ++ + +     +L S   A S++  L+ G +++   ++ G   
Sbjct: 393 GYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQF 452

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
                ++L+ MY +C  ++ A +VF+ + TKD++ W S + A   +     A + F  M 
Sbjct: 453 NSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM- 511

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
               + D +++  ++ A +H+   NE     + M C+++L   P
Sbjct: 512 ---LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSP 552



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 102/483 (21%), Positives = 213/483 (44%), Gaps = 55/483 (11%)

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
           L+V   +A I    R G++ EA  V   +  +D ++WNSM++ +  N +   A   +  +
Sbjct: 32  LEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI 91

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS------------------ 294
            G   +   +     +S  GRLG +L  + +    +++  V+                  
Sbjct: 92  SGGNMRTGAIL----LSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMAR 147

Query: 295 ---------DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
                    D+   N+++  Y     +     +F +M  ++ +SWT +I+GY +   H K
Sbjct: 148 RLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGK 207

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVD 404
           A ++F  +  EGL  D     S L A  GL  +   + +    ++ G   D+VI  AI++
Sbjct: 208 AWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILN 267

Query: 405 VYGKCGNI-DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           VY +  ++ D +   FES+  ++  +W++MI++  H G  + A+ ++        E D +
Sbjct: 268 VYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY--------ERDPV 319

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIANKVFNC 522
             ++  +A  +  + + G+  +  I+ +       V+ ++L+  Y + G ++ A ++F+ 
Sbjct: 320 KSIACRTALIT-GLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDK 378

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +  ++ I W  MI     +GR + A+ L  ++      P   +  ++ +ACS+   +  G
Sbjct: 379 MPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438

Query: 583 KKFLEI---MRCDYQLDPWPEHYAC--LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
            +   +   + C +        +AC  L+ + G+  ++E A Q    M  +     W + 
Sbjct: 439 TQVHSLAVKVGCQFN------SFACNALITMYGKCRNMEYARQVFSRMVTKDIVS-WNSF 491

Query: 638 LGA 640
           L A
Sbjct: 492 LAA 494


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 260/722 (36%), Positives = 403/722 (55%), Gaps = 4/722 (0%)

Query: 24  FTWNAMLGAYVSNGEPLRVLETYSRM--RVLGISVDAFTFPCVIKACAMLKDLDCGAKIH 81
             WN ++      G+    L  Y +M         D+ TFP V+K+CA L  +  G  +H
Sbjct: 110 LPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVH 169

Query: 82  GLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQC 141
                 G D   F+ ++L+ MYA       ARQ+FD M E+ D VLWN ++  Y  +G  
Sbjct: 170 RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAER-DCVLWNVMMDGYVKAGSV 228

Query: 142 LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANAL 201
             A+ LF +M+  G   N  T    L      S    G+++H   VK G   +V VAN L
Sbjct: 229 SSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTL 288

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           ++MYA+C  + +   +   +   D V+WN M++G VQN    +A+  F ++Q +G +PD 
Sbjct: 289 VSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDS 348

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
           V  V+ + A   L     GKELH Y ++     D+ + + L+D+Y KC  V     V+  
Sbjct: 349 VTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDS 408

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
             A D +  +T+I+GY  N    +A+++FR +  +G+  + + I SVL AC+ +  M   
Sbjct: 409 SKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLG 468

Query: 382 KEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
           +E+H Y ++        + +A++D+Y KCG +D S  +F  I +KD V+W SMISS+  N
Sbjct: 469 QELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQN 528

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
           G   EAL LF  M    V+  ++T+ S LSA +SL  +  GKE++G +I+     +    
Sbjct: 529 GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAE 588

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           S+L+DMY +CG L+ A++VF  +  K+ + W S+I + G +G  K ++ L   M+ E F 
Sbjct: 589 SALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFK 648

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
            DH+TFLAL+ AC+H+G + EG +    M  +YQ+ P  EH+AC+VDL  RA  L++A +
Sbjct: 649 ADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAME 708

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
            +  M  +P A +W ALL ACRVH N EL EI +++L +LDP N G YVL+SN+ A + +
Sbjct: 709 LIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGR 768

Query: 681 WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
           W  V +VR  M+ + ++K PG SW+++ N  H F+A DKSH +S++IY  L  I  +L  
Sbjct: 769 WDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELRE 828

Query: 741 EG 742
           EG
Sbjct: 829 EG 830



 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 177/549 (32%), Positives = 303/549 (55%), Gaps = 14/549 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   G + DA Q+FD +++R    WN M+  YV  G     +E +  MR  G   +  T
Sbjct: 190 MYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFAT 249

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             C +   A   DL  G ++H L +K G +S   + N+LV+MYAKC       +LF  M 
Sbjct: 250 LACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLM- 308

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            ++D+V WN +IS    +G   +AL LF +MQ+ G+  ++ T V+ L A  D +    G 
Sbjct: 309 PRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGK 368

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   V++  ++ V++ +AL+ +Y +C  +  A  V    +  D V  ++M++G+V N 
Sbjct: 369 ELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNG 428

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +  +A++ FR L   G +P+ V   + + A   +  +  G+ELH+YA+K  +     + +
Sbjct: 429 MSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVES 488

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LMDMYAKC  ++    +F +++A+D ++W ++I+ +AQN    +AL LFR + +EG+  
Sbjct: 489 ALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKY 548

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
             + I SVL AC+ L  +   KEIHG +I+  + +DL   +A++D+YGKCGN++++  VF
Sbjct: 549 SNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVF 608

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           ES+  K+ VSW S+I+SY   GL  E++ L   M E   ++D +T ++ +SA +      
Sbjct: 609 ESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACA-----H 663

Query: 480 KGKELNGFIIRKGFNLEGSVASS------LVDMYARCGALDIANKVFNCVQTK-DLILWT 532
            G+   G  + +    E  +A        +VD+Y+R G LD A ++   +  K D  +W 
Sbjct: 664 AGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWG 723

Query: 533 SMINANGLH 541
           ++++A  +H
Sbjct: 724 ALLHACRVH 732



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 171/570 (30%), Positives = 313/570 (54%), Gaps = 9/570 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-LVAMYAKCYDFRKARQLFDRM--G 120
           V++ C     L  G ++HG  +  G  +TD  + + LV MY     FR A  +F  +  G
Sbjct: 45  VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACEDSSFETL 178
                + WN +I   + +G    AL  + +M       + +++TF   +++C       L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  +H      G +  ++V +ALI MYA  G + +A  V   +  +D V WN M+ G+V+
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                 A++ F +++ +G +P+       +S S    +L  G +LH  A+K G  S++ +
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAV 284

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            NTL+ MYAKC C++   ++F  M   D ++W  +I+G  QN    +AL LF  +Q  G+
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D + + S+L A + L   +Q KE+HGYI+R  +  D+ +++A+VD+Y KC  +  +++
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           V++S ++ DVV  ++MIS YV NG++ EA+++F  + E  +  +++ + S L A +S++ 
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA 464

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           +K G+EL+ + ++  +     V S+L+DMYA+CG LD+++ +F+ +  KD + W SMI++
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISS 524

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLD 596
              +G  + A++LF +M  E     ++T  ++L AC+    I  GK+    +++   + D
Sbjct: 525 FAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRAD 584

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
            + E  + L+D+ G+  +LE A++   SM 
Sbjct: 585 LFAE--SALIDMYGKCGNLEWAHRVFESMP 612



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 212/430 (49%), Gaps = 7/430 (1%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
            +A L+ C   S  +LG+++H   V +G       +   L+ MY    +  +A  V   L
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 222 ENKD---SVSWNSMLTGFVQNDLYCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGN 276
                  ++ WN ++ G      Y  A+ F+ ++    +   PD       V +   LG 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           +  G+ +H  A   G   D+ +G+ L+ MYA    +    +VF  M  +D + W  ++ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SD 395
           Y +      A+ELF  ++  G + +   +   L   +    +    ++H   ++ GL S+
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + + N +V +Y KC  +D    +F  +   D+V+W  MIS  V NG  ++AL LF  M +
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
           + +  DS+TLVS L A + L+   +GKEL+G+I+R   +++  + S+LVD+Y +C A+ +
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRM 401

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A  V++  +  D+++ ++MI+   L+G  + A+ +F  +  +   P+ +   ++L AC+ 
Sbjct: 402 AQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACAS 461

Query: 576 SGLINEGKKF 585
              +  G++ 
Sbjct: 462 MAAMKLGQEL 471


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/667 (38%), Positives = 398/667 (59%), Gaps = 38/667 (5%)

Query: 172 DSSFETLGME-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
           DSS +T   + +HA  V +G+   ++++  L+ +YA  G ++ +     Q+  KD  +WN
Sbjct: 27  DSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWN 86

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
           SM++ +V N  + +A+  F +L    + +PD       + A G    L++G+++H +A K
Sbjct: 87  SMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFK 143

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
            GF  ++ +  +L+ MY++         +F  M  +D  SW  +I+G  QN    +AL++
Sbjct: 144 LGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDV 203

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKC 409
              ++LEG+  + + + S                              IL   VD+Y K 
Sbjct: 204 LDEMRLEGIKMNFVTVVS------------------------------ILPVFVDMYAKL 233

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE-ANVESDSITLVSA 468
           G +D +  VFE I  KDV+SW ++I+ Y  NGLA+EA+E++ +M E   +  +  T VS 
Sbjct: 234 GLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSI 293

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           L A + +  L++G +++G +I+   +L+  VA+ L+D+Y +CG L  A  +F  V  +  
Sbjct: 294 LPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 353

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
           + W ++I+ +G+HG  +  + LF +M  E   PDH+TF++LL ACSHSG + EGK    +
Sbjct: 354 VTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRL 413

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           M+ +Y + P  +HY C+VDLLGRA +LE AY F++ M ++P A +W ALLGACR+H N E
Sbjct: 414 MQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 472

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
           LG+  + +L E+D  N G YVL+SN++A   KW+ V++VR   R  GLKKTPG S IE+ 
Sbjct: 473 LGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVN 532

Query: 709 NKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHS 768
            K+  F   ++SH +  EIY++L  +T K+ +  GY+    FVL +VEE+EK  +L  HS
Sbjct: 533 RKVDVFYTGNQSHPKCKEIYEELRVLTAKM-KSLGYIPDYSFVLQDVEEDEKEHILTSHS 591

Query: 769 ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
           ERLAIA+G++ +   S IRI KNLRVC DCH+  K +SR+  RE+VVRD+NRFHHF+ G+
Sbjct: 592 ERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGI 651

Query: 829 CSCGDYW 835
           CSCGDYW
Sbjct: 652 CSCGDYW 658



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 146/502 (29%), Positives = 250/502 (49%), Gaps = 48/502 (9%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +H L++  G   + FI   LV +YA   D   +R  FD++ +K DV  WNS+ISAY  +G
Sbjct: 38  LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQK-DVYAWNSMISAYVHNG 96

Query: 140 QCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETL--GMEIHAATVKSGQNLQVY 196
              EA+G F ++  V  +  + YTF   L+AC      TL  G +IH    K G    V+
Sbjct: 97  HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC-----GTLVDGRKIHCWAFKLGFQWNVF 151

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           VA +LI MY+R G    A  +   +  +D  SWN+M++G +QN    +A+    E++  G
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 211

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
                                          IK  FV+ + I    +DMYAK   ++   
Sbjct: 212 -------------------------------IKMNFVTVVSILPVFVDMYAKLGLLDSAH 240

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV-QLEGLDADVMIIGSVLMACSGL 375
           +VF  +  +D ISW T+I GYAQN    +A+E+++ + + + +  +     S+L A + +
Sbjct: 241 KVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 300

Query: 376 KCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
             + Q  +IHG +I+  L  D+ +   ++DVYGKCG +  + ++F  +  +  V+W ++I
Sbjct: 301 GALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAII 360

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           S +  +G A + L+LF  M +  V+ D +T VS LSA S    +++GK     +   G  
Sbjct: 361 SCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIK 420

Query: 495 LEGSVASSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMINANGLHGR---GKVAIDL 550
                   +VD+  R G L++A + + +     D  +W +++ A  +HG    GK A D 
Sbjct: 421 PSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDR 480

Query: 551 FYKMEAESFAPDHITFLALLYA 572
            +++++++    +   L+ +YA
Sbjct: 481 LFEVDSKNVG--YYVLLSNIYA 500



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 208/446 (46%), Gaps = 51/446 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           +Y   G V  +   FD++ Q+ V+ WN+M+ AYV NG     +  + ++ ++  I  D +
Sbjct: 60  LYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFY 119

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP V+KAC  L D   G KIH    K G+    F+  SL+ MY++      AR LFD M
Sbjct: 120 TFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDM 176

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + D+  WN++IS    +G   +AL +  EM+  G+  N  T V+ L            
Sbjct: 177 PFR-DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILP----------- 224

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                                 + MYA+ G +  A  V   +  KD +SWN+++TG+ QN
Sbjct: 225 --------------------VFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQN 264

Query: 240 DLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            L  +A++ ++ ++   +  P+Q   V+ + A   +G L  G ++H   IK     D+ +
Sbjct: 265 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFV 324

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
              L+D+Y KC  +     +FYQ+  +  ++W  II+ +  +    K L+LF  +  EG+
Sbjct: 325 ATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGV 384

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             D +   S+L ACS       G  C    +E   Y I+  L        +VD+ G+ G 
Sbjct: 385 KPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE---YGIKPSLKH---YGCMVDLLGRAGY 438

Query: 412 IDYSRNVFESIE-SKDVVSWTSMISS 436
           ++ + +  + +    D   W +++ +
Sbjct: 439 LEMAYDFIKDMPLQPDASIWGALLGA 464



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 199/481 (41%), Gaps = 106/481 (22%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + G    A  LFD +  R + +WNAM+   + NG   + L+    MR+ GI ++  T
Sbjct: 159 MYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVT 218

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++                                  V MYAK      A ++F+ + 
Sbjct: 219 VVSILPV-------------------------------FVDMYAKLGLLDSAHKVFEIIP 247

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLG 179
            K DV+ WN++I+ Y+ +G   EA+ +++ M+    ++ N  T+V+ L A         G
Sbjct: 248 VK-DVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 306

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           M+IH   +K+  +L V+VA  LI +Y +CG++ +A  + YQ+  + SV+WN++++    +
Sbjct: 307 MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 366

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE----LHAYAIKQGFVSD 295
               K ++ F E+   G KPD V  V+ +SA    G +  GK     +  Y IK      
Sbjct: 367 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPS---- 422

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
                  +  Y   C V+ +GR  Y   A DFI                         + 
Sbjct: 423 -------LKHYG--CMVDLLGRAGYLEMAYDFI-------------------------KD 448

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI-IRKGLSD------------LVILNAI 402
             L  D  I G++L AC           IHG I + K  SD             V+L+ I
Sbjct: 449 MPLQPDASIWGALLGAC----------RIHGNIELGKFASDRLFEVDSKNVGYYVLLSNI 498

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
               GK   +D  R++      K    W+++          N  +++FY  N+++ +   
Sbjct: 499 YANVGKWEGVDKVRSLARERGLKKTPGWSTI--------EVNRKVDVFYTGNQSHPKCKE 550

Query: 463 I 463
           I
Sbjct: 551 I 551


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/729 (36%), Positives = 418/729 (57%), Gaps = 10/729 (1%)

Query: 27  NAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT-FPCVIKACAMLKDLDCGAKIHGLVL 85
           N ++  Y  +G     +  Y +M   G+ V+ F  FPC+IKA   L D+  G +IHG VL
Sbjct: 77  NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVL 136

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
           K G      +VNSL+ MY KC     A Q+F++M E  D+V WN++IS +  S     +L
Sbjct: 137 KLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEV-DLVSWNTMISGFQKSMDYTRSL 195

Query: 146 GLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
             FR M    G+  N    V+++ +C      T G EIH   VKSG +++ Y+ ++LI M
Sbjct: 196 MFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEM 255

Query: 205 YARCGKMTEAAGVLYQLENKDSVS-----WNSMLTGFVQNDLYCKAMQFFRELQGAGQKP 259
           Y +CG +  A  +   + +KDSV      WN M++G+V N  + +A+  F ++   G KP
Sbjct: 256 YMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKP 315

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D    V+  S      ++  GK++H    K G  +++++   L+DMY KC  +    ++F
Sbjct: 316 DYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIF 375

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
            +    + I W+ +I+  AQ+ C  KALELF   ++E   AD  I+ +VL ACS L    
Sbjct: 376 RRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKP 435

Query: 380 QTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
           +  +IHG   + G +SD+ + +A+VD+Y KC ++ YS+ VF  +  KD+VSW ++IS Y 
Sbjct: 436 EGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYA 495

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            +  A+EAL+ F  M    +  +++T+   LS  + LS++   KE++G++IR+G      
Sbjct: 496 QDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVL 555

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           V++SL+  YA+CG ++ +   F  +  ++ + W S+I   G+H R    I LF KM A  
Sbjct: 556 VSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASG 615

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
             PDH+TF A+L ACSH+G ++EG K+ + M  D+ L P  E Y C+VDLLGRA HL +A
Sbjct: 616 IKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQA 675

Query: 619 YQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
           Y  + +M   P   +W +LLG+C+ H ++ L EIVA  + +L P + G  VL++N++   
Sbjct: 676 YDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENL 735

Query: 679 RKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKL 738
            K ++  +VR  ++  GLKK PG SWIE+ N  H FIA D+SHS+SDEIY  +  +T ++
Sbjct: 736 GKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTEI 795

Query: 739 EREGGYVAQ 747
           +R  GY+ Q
Sbjct: 796 KR-AGYIPQ 803



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 173/551 (31%), Positives = 298/551 (54%), Gaps = 10/551 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
           MY KCG V DA Q+F+K+ +  + +WN M+  +  + +  R L  +  M    GI  +  
Sbjct: 153 MYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRV 212

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
                I +C+ L+ L  G +IHG+V+K G D  +++V+SL+ MY KC   + A  +F+ +
Sbjct: 213 ACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSI 272

Query: 120 GEKEDV----VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            +K+ V    V+WN +IS Y ++G   +AL LF +M   G+  +  T V+    C +S  
Sbjct: 273 LDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLD 332

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G +IH    K G    + V  AL+ MY +CG M     +  + +N + + W+++++ 
Sbjct: 333 IAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISN 392

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
             Q+    KA++ F E +      D    V  + A   L     G ++H  A K GFVSD
Sbjct: 393 CAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSD 452

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + +G+ L+D+YAKC  + Y  +VF +++ +D +SW  +I+GYAQ+ C  +AL+ FR +QL
Sbjct: 453 VFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQL 512

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
           E +  + + I  +L  C+ L  M+  KE+HGY+IR+GL S +++ N+++  Y KCG+I+ 
Sbjct: 513 EEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINS 572

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           S   FE +  ++ VSW S+I     +   +E + LF  M  + ++ D +T  + LSA S 
Sbjct: 573 SLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSH 632

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILW 531
              + +G +    ++ + FNL+  +   + +VD+  R G L+ A  +   +  T D  +W
Sbjct: 633 AGRVDEGCKYFKSMV-EDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIW 691

Query: 532 TSMINANGLHG 542
            S++ +   HG
Sbjct: 692 GSLLGSCKNHG 702


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/590 (41%), Positives = 357/590 (60%), Gaps = 22/590 (3%)

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY------------ 314
           A+ +   LG       LHA AI+ G  +D    N L+++  K    ++            
Sbjct: 55  ALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGG 114

Query: 315 --------MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
                   M +VF +M  +D +SW T+I G A++  H +AL + R +  +G   D   + 
Sbjct: 115 LESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLS 174

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           +VL   +    + +   +HGY I+ G  +D+ + ++++D+Y  C  +DYS  VF+S    
Sbjct: 175 TVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC 234

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           D V W SM++ Y  NG   EAL +F  M +A V    +T  S + A  +LS+L+ GK+L+
Sbjct: 235 DAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLH 294

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
            ++IR  FN    ++SSL+DMY +CG +DIA +VFN +Q+ D++ WT+MI    LHG   
Sbjct: 295 AYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTT 354

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A  LF +ME  +  P+HITFLA+L ACSH+GL++ G K+   M   Y   P  EH A L
Sbjct: 355 EAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAAL 414

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
            D LGRA  L+EAY F+  M+I+PT+ VW  LL ACRVH N  L E VAKK+ EL+P + 
Sbjct: 415 ADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSM 474

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
           G++V++SN+++AS +W +  Q+R  MR  G+KK P  SWIE+ NK+H FIA DKSH   D
Sbjct: 475 GSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYD 534

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
            I   L   +E++ R+ GYV   + VL ++EEE+K ++L GHSE+LAI +G++ +  G+ 
Sbjct: 535 RIIDALNVYSEQMIRQ-GYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTT 593

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           IR+ KNLRVCVDCH   K +S++  RE+VVRD NRFH F+ G CSCGD+W
Sbjct: 594 IRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 232/497 (46%), Gaps = 41/497 (8%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMR--VLGISVDAFTFPCVIKACAMLKDLDCGAKIHG 82
           +W   +    S G+ L  +  + +MR  V   S    + P  +K+CA L      A +H 
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73

Query: 83  LVLKCGYDSTDFIVNSLVAMYAKCYDFRKA--------------------RQLFDRMGEK 122
           L ++ G  +  F  N+L+ +  K   F                       R++FD M E+
Sbjct: 74  LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D V WN++I   +   +  EAL + REM R G + + +T    L    + +    GM +
Sbjct: 134 -DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV 192

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H   +K+G +  V+V ++LI MYA C +M  +  V     + D+V WNSML G+ QN   
Sbjct: 193 HGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSV 252

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A+  FR +  AG +P  V   + + A G L  L  GK+LHAY I+  F  ++ I ++L
Sbjct: 253 EEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSL 312

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMY KC  V+   RVF  + + D +SWT +I GYA +    +A  LF  ++L  +  + 
Sbjct: 313 IDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNH 372

Query: 363 MIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYS 415
           +   +VL ACS       G K  +     +G++       L    A+ D  G+ G++D +
Sbjct: 373 ITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFV-----PSLEHCAALADTLGRAGDLDEA 427

Query: 416 RNVFESIESKDVVS-WTSMISS-YVHNG--LANEALELFYLMNEANVESDSI--TLVSAL 469
            N    ++ K   S W++++ +  VH    LA E  +  + +   ++ S  I   + SA 
Sbjct: 428 YNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSAS 487

Query: 470 SAASSLSILKKGKELNG 486
              +  + L+K   + G
Sbjct: 488 GRWNEAAQLRKSMRIKG 504



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 179/366 (48%), Gaps = 4/366 (1%)

Query: 12  EQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML 71
            ++FD++ +R   +WN ++     +      L     M   G   D FT   V+   A  
Sbjct: 124 RKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAEC 183

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
            D+  G  +HG  +K G+D+  F+ +SL+ MYA C     + ++FD   +  D VLWNS+
Sbjct: 184 ADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC-DAVLWNSM 242

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           ++ Y+ +G   EALG+FR M + G+     TF + + A  + S   LG ++HA  +++  
Sbjct: 243 LAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARF 302

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
           N  ++++++LI MY +CG +  A  V   +++ D VSW +M+ G+  +    +A   F  
Sbjct: 303 NDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFER 362

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           ++    KP+ +  +  ++A    G + NG K  ++ + + GFV  L+    L D   +  
Sbjct: 363 MELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAG 422

Query: 311 CVNYMGRVFYQMTAQDFIS-WTTIIAGYAQNNCHLKALELFRTV-QLEGLDADVMIIGSV 368
            ++       +M  +   S W+T++     +   + A E+ + + +LE       +I S 
Sbjct: 423 DLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSN 482

Query: 369 LMACSG 374
           + + SG
Sbjct: 483 MYSASG 488



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C  +  + ++FD  S      WN+ML  Y  NG     L  + RM   G+     T
Sbjct: 214 MYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVT 273

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +I A   L  L  G ++H  +++  ++   FI +SL+ MY KC +   AR++F+ + 
Sbjct: 274 FSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGI- 332

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  D+V W ++I  Y+  G   EA  LF  M+   +  N  TF+A L AC  +     G 
Sbjct: 333 QSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGW 392

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
           +  ++ + + G    +    AL     R G + EA   + +++ K + S W+++L
Sbjct: 393 KYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 447


>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
 gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 270/836 (32%), Positives = 458/836 (54%), Gaps = 22/836 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K   + +A +LFD++S RTVF W  M+ A+  + E    L  +  M   G   + FT
Sbjct: 67  LYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFT 126

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+++CA L+D+  G ++HG V+K G++    + +SL  +Y+KC  F++A +LF  + 
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSL- 185

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL-- 178
           +  D + W  +IS+   + +  EAL  + EM + G+  N +TFV  L A   SSF  L  
Sbjct: 186 QNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA---SSFLGLEF 242

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  IH+  +  G  L V +  +L+  Y++  KM +A  VL     +D   W S+++GFV+
Sbjct: 243 GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVR 302

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N    +A+  F E++  G +P+       +S    + +L  GK++H+  IK GF     +
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362

Query: 299 GNTLMDMYAKCCCVNY-MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           GN L+DMY KC        RVF  M + + +SWTT+I G   +        L   +    
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           ++ +V+ +  VL ACS L+ + +  EIH Y++R+ +  ++V+ N++VD Y     +DY+ 
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           NV  S++ +D +++TS+++ +   G    AL +   M    +  D ++L   +SA+++L 
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L+ GK L+ + ++ GF+   SV +SLVDMY++CG+L+ A KVF  + T D++ W  +++
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
               +G    A+  F +M  +   PD +TFL LL ACS+  L + G ++ ++M+  Y ++
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIE 662

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHY  LV +LGRA  LEEA   V +M ++P A ++  LL ACR   N  LGE +A K
Sbjct: 663 PQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANK 722

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
            L L P +P  Y+L+++++  S K +  ++ R  M    L K  G S +E+  K+HSF++
Sbjct: 723 GLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVS 782

Query: 717 RDKSH-SESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
            D +   +++ IY ++  I E+++R G                E       HS + A+ Y
Sbjct: 783 EDVTRVDKTNGIYAEIESIKEEIKRFGS----------PYRGNENASF---HSAKQAVVY 829

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           G + ++  + + + KN  +C DCH F  +++RL  +++ VRD N+ H F+ G CSC
Sbjct: 830 GFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 226/467 (48%), Gaps = 9/467 (1%)

Query: 164 VAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN 223
           +  L  CE +S   +G+ IH   +K G    + + N L+++Y +   +  A  +  ++ +
Sbjct: 28  IRILSFCESNS-SRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           +   +W  M++ F ++  +  A+  F E+  +G  P++    + V +   L ++  G  +
Sbjct: 87  RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           H   IK GF  +  +G++L D+Y+KC        +F  +   D ISWT +I+        
Sbjct: 147 HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKW 206

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAI 402
            +AL+ +  +   G+  +      +L A S L  +   K IH  II +G+  ++V+  ++
Sbjct: 207 REALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSL 265

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           VD Y +   ++ +  V  S   +DV  WTS++S +V N  A EA+  F  M    ++ ++
Sbjct: 266 VDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI-ANKVFN 521
            T  + LS  S++  L  GK+++   I+ GF     V ++LVDMY +C A ++ A++VF 
Sbjct: 326 FTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFG 385

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            + + +++ WT++I     HG  +    L  +M      P+ +T   +L ACS    +  
Sbjct: 386 AMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK---LRH 442

Query: 582 GKKFLEIMR--CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
            ++ LEI        +D        LVD    +  ++ A+  +RSM+
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK 489



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 12/287 (4%)

Query: 384 IHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           IH  +I+ GL  +L + N ++ +Y K   I  +R +F+ +  + V +WT MIS++  +  
Sbjct: 45  IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
              AL LF  M  +    +  T  S + + + L  +  G  ++G +I+ GF     V SS
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164

Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           L D+Y++CG    A ++F+ +Q  D I WT MI++     + + A+  + +M      P+
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPN 224

Query: 563 HITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY---ACLVDLLGRANHLEEAY 619
             TF+ LL A S  GL     +F + +  +  +   P +      LVD   + + +E+A 
Sbjct: 225 EFTFVKLLGASSFLGL-----EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279

Query: 620 QFVRSMQIEPTAEVWCALL-GACRVHSNKE-LGEIVAKKLLELDPGN 664
           + + S   E    +W +++ G  R    KE +G  +  + L L P N
Sbjct: 280 RVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/629 (38%), Positives = 371/629 (58%), Gaps = 23/629 (3%)

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT--VNAVSASGRLGNLLNGKELHAY 286
           W   +        +C A+  F  ++ +      V      A+ +   LG    G  LHA 
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCC----------VNYMG---------RVFYQMTAQDF 327
           AI+ G  +D    N L+++Y K  C          V+  G         +VF +M  +D 
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW T++ G A+   H +AL   R +  EG   D   + +VL   +    + +  E+HG+
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
             R G  SD+ + ++++D+Y  C   DYS  VF+++  +D + W S+++    NG   EA
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L +F  M +A V    +T  S +    +L+ L+ GK+L+ ++I  GF     ++SSL+DM
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDM 315

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y +CG + IA+ +F+ + + D++ WT+MI    LHG  + A+ LF +ME  +  P+HITF
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 375

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           LA+L ACSH+GL+++G K+ + M   Y + P  EH+A L D LGRA  L+EAY F+  MQ
Sbjct: 376 LAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ 435

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           I+PTA VW  LL ACRVH N  L E VAKK++EL+P + G++V++SN+++AS +W +   
Sbjct: 436 IKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAH 495

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           +R  MR  G+KK P  SWIE+ +K+H F+A D+SH   D I   L   +E++ RE G+V 
Sbjct: 496 LRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMARE-GHVP 554

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
            T+ V  ++EEE K  +L GHSE+LAI +G++ +  G+ IR+ KNLRVC+DCH+  K +S
Sbjct: 555 NTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFIS 614

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +L  RE+VVRDANRFHHF+ G CSCGD+W
Sbjct: 615 KLADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 208/439 (47%), Gaps = 37/439 (8%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGI---SVDAFTFPCVIKACAMLKDLDCGAKIHG 82
           W   + A  + G     +  + RMR       SV A + P  +K+CA L     GA +H 
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPA-SLPAALKSCAALGLSALGASLHA 74

Query: 83  LVLKCGYDSTDFIVNSLVAMYAKC-------------------YDFRKARQLFDRMGEKE 123
           L ++ G  +  F  N+L+ +Y K                      F   R++FD M E+ 
Sbjct: 75  LAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIER- 133

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           DVV WN+++   +  G+  EALG  R+M R G   +++T    L    + +    G+E+H
Sbjct: 134 DVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVH 193

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
               ++G +  V+V ++LI MYA C +   +  V   L  +D + WNS+L G  QN    
Sbjct: 194 GFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVE 253

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+  FR +  AG +P  V   + +   G L +L  GK+LHAY I  GF  ++ I ++L+
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLI 313

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMY KC  ++    +F +M++ D +SWT +I GYA +    +AL LF  ++L     + +
Sbjct: 314 DMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHI 373

Query: 364 IIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
              +VL ACS       G K        +G +       L    A+ D  G+ G +D + 
Sbjct: 374 TFLAVLTACSHAGLVDKGWKYFKSMSNHYGIV-----PTLEHFAALADTLGRAGELDEAY 428

Query: 417 NVFESIESKDVVS-WTSMI 434
           N    ++ K   S W++++
Sbjct: 429 NFISKMQIKPTASVWSTLL 447



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 178/369 (48%), Gaps = 10/369 (2%)

Query: 12  EQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML 71
            ++FD++ +R V +WN ++      G     L    +M   G   D+FT   V+   A  
Sbjct: 124 RKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAEC 183

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
            D+  G ++HG   + G+DS  F+ +SL+ MYA C     + ++FD +  + D +LWNS+
Sbjct: 184 ADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DHILWNSL 242

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           ++  + +G   EALG+FR M + G+     TF + +  C + +    G ++HA  +  G 
Sbjct: 243 LAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGF 302

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
              V+++++LI MY +CG+++ A  +  ++ + D VSW +M+ G+  +    +A+  F  
Sbjct: 303 EDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFER 362

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           ++    KP+ +  +  ++A    G +  G K   + +   G V  L+    L D   +  
Sbjct: 363 MELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAG 422

Query: 311 ----CVNYMGRVFYQMTAQDFISWTTII-AGYAQNNCHLKALELFRTVQLEGLDADVMII 365
                 N++ ++  + TA     W+T++ A     N  L      + ++LE       ++
Sbjct: 423 ELDEAYNFISKMQIKPTAS---VWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVV 479

Query: 366 GSVLMACSG 374
            S + + SG
Sbjct: 480 LSNMYSASG 488



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 13/240 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C     + ++FD +  R    WN++L     NG     L  + RM   G+     T
Sbjct: 214 MYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVT 273

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +I  C  L  L  G ++H  V+  G++   FI +SL+ MY KC +   A  +FD+M 
Sbjct: 274 FSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMS 333

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG- 179
              DVV W ++I  Y+  G   EAL LF  M+      N  TF+A L AC  +     G 
Sbjct: 334 SP-DVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGW 392

Query: 180 -----MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
                M  H   V + ++       AL     R G++ EA   + +++ K + S W+++L
Sbjct: 393 KYFKSMSNHYGIVPTLEHFA-----ALADTLGRAGELDEAYNFISKMQIKPTASVWSTLL 447


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/617 (38%), Positives = 381/617 (61%), Gaps = 3/617 (0%)

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +  ++ VSW +M++G  QN  + +A++ F  ++  G+ P Q    +A+ A   LG++  G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K++H  A+K G  S+L +G+ L DMY+KC  +    +VF +M  +D +SWT +I GY++ 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
               +AL  F+ +  E +  D  ++ S L AC  LK     + +H  +++ G  SD+ + 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 400 NAIVDVYGKCGNIDYSRNVFE-SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
           NA+ D+Y K G+++ + NVF    E ++VVS+T +I  YV      + L +F  +    +
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           E +  T  S + A ++ + L++G +L+  +++  F+ +  V+S LVDMY +CG L+ A +
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
            F+ +     I W S+++  G HG GK AI +F +M      P+ ITF++LL  CSH+GL
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           + EG  +   M   Y + P  EHY+C++DLLGRA  L+EA +F+  M  EP A  WC+ L
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420

Query: 639 GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
           GACR+H +KE+G++ A+KL++L+P N G  VL+SN++A  R+W+DV  VRMRMR   +KK
Sbjct: 421 GACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK 480

Query: 699 TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
            PG SW+++G K H F A D SH     IY+KL  + +++ +  GYV +T  V  ++++ 
Sbjct: 481 LPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQI-KAAGYVPRTDSVPLDMDDS 539

Query: 759 EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
            K ++L+ HSER+A+A+ ++    G  I + KNLRVCVDCHS  K +S++ GR+++VRD 
Sbjct: 540 MKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDN 599

Query: 819 NRFHHFEAGVCSCGDYW 835
           +RFHHF  G CSCGDYW
Sbjct: 600 SRFHHFTDGSCSCGDYW 616



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 234/458 (51%), Gaps = 9/458 (1%)

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + ++V W ++IS  S + +  EA+  F  M+  G V   + F +A++AC       +G +
Sbjct: 3   QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 62

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +K G   +++V + L  MY++CG M +A  V  ++  KD VSW +M+ G+ +   
Sbjct: 63  MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 122

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           + +A+  F+++       DQ    + + A G L     G+ +H+  +K GF SD+ +GN 
Sbjct: 123 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 182

Query: 302 LMDMYAKCCCVNYMGRVF-YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           L DMY+K   +     VF      ++ +S+T +I GY +     K L +F  ++ +G++ 
Sbjct: 183 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 242

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           +     S++ AC+    + Q  ++H  +++     D  + + +VD+YGKCG ++ +   F
Sbjct: 243 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAF 302

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + I     ++W S++S +  +GL  +A+++F  M +  V+ ++IT +S L+  S   +++
Sbjct: 303 DEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVE 362

Query: 480 KGKELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINA 537
           +G +    + +    + G    S ++D+  R G L  A +  N +    +   W S + A
Sbjct: 363 EGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGA 422

Query: 538 NGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
             +HG    GK+A +   K+E ++     +  L+ +YA
Sbjct: 423 CRIHGDKEMGKLAAEKLVKLEPKNSGA--LVLLSNIYA 458



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 177/357 (49%), Gaps = 2/357 (0%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCG 77
           + QR + +W AM+     N +    + T+  MR+ G     F F   I+ACA L  ++ G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
            ++H L LK G  S  F+ ++L  MY+KC     A ++F+ M  K D V W ++I  YS 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSK 119

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
            G+  EAL  F++M    +  + +   + L AC        G  +H++ VK G    ++V
Sbjct: 120 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 179

Query: 198 ANALIAMYARCGKMTEAAGVL-YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
            NAL  MY++ G M  A+ V     E ++ VS+  ++ G+V+ +   K +  F EL+  G
Sbjct: 180 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            +P++    + + A      L  G +LHA  +K  F  D  + + L+DMY KC  +    
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           + F ++     I+W ++++ + Q+     A+++F  +   G+  + +   S+L  CS
Sbjct: 300 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS 356



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 165/329 (50%), Gaps = 8/329 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++ DA ++F+++  +   +W AM+  Y   GE    L  + +M    +++D   
Sbjct: 85  MYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHV 144

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + AC  LK    G  +H  V+K G++S  F+ N+L  MY+K  D   A  +F    
Sbjct: 145 LCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS 204

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  +VV +  +I  Y  + Q  + L +F E++R G+  N +TF + ++AC + +    G 
Sbjct: 205 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 264

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +K   +   +V++ L+ MY +CG + +A     ++ +   ++WNS+++ F Q+ 
Sbjct: 265 QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHG 324

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L   A++ F  +   G KP+ +  ++ ++     G +  G + + Y++ + +        
Sbjct: 325 LGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD-YFYSMDKTY-------G 376

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
            +       C ++ +GR      A++FI+
Sbjct: 377 VVPGEEHYSCVIDLLGRAGRLKEAKEFIN 405


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/682 (37%), Positives = 386/682 (56%), Gaps = 8/682 (1%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
             V+ L+ C        G ++H   +KSG  L +  +N LI MY +C +   A  V   +
Sbjct: 8   NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             ++ VSW+++++G V N     ++  F E+   G  P++      + A G L  L  G 
Sbjct: 68  PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           ++H + +K GF   +++GN+L+DMY+KC  +N   +VF ++  +  ISW  +IAG+    
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187

Query: 342 CHLKALELFRTVQLEGLD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDL 396
              KAL+ F  +Q   +    D   + S+L ACS    +   K+IHG+++R G    S  
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            I  ++VD+Y KCG +  +R  F+ I+ K ++SW+S+I  Y   G   EA+ LF  + E 
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           N + DS  L S +   +  ++L++GK++    ++    LE SV +S+VDMY +CG +D A
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            K F  +Q KD+I WT +I   G HG GK ++ +FY+M   +  PD + +LA+L ACSHS
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           G+I EG++    +   + + P  EHYAC+VDLLGRA  L+EA   + +M I+P   +W  
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL  CRVH + ELG+ V K LL +D  NP NYV++SN++  +  W +    R      GL
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           KK  G SW+EI  ++H F + + SH  +  I + L E   +L  E GYV   +  LH+++
Sbjct: 548 KKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDID 607

Query: 757 EEEKVQMLYGHSERLAIAYGVLK---STEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +E K + L  HSE+LAI   +     + +G  IR+ KNLRVCVDCH F K +S++     
Sbjct: 608 DESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAY 667

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           VVRDA RFH FE G CSCGDYW
Sbjct: 668 VVRDAVRFHSFEDGCCSCGDYW 689



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 281/529 (53%), Gaps = 17/529 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++ C      D G ++H  +LK G        N L+ MY KC +   A ++FD M E+ 
Sbjct: 12  ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER- 70

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +VV W++++S +  +G    +L LF EM R G+  N +TF   L+AC   +    G++IH
Sbjct: 71  NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              +K G  + V V N+L+ MY++CG++ EA  V  ++ ++  +SWN+M+ GFV      
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190

Query: 244 KAMQFFRELQGAG--QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--VSDLQIG 299
           KA+  F  +Q A   ++PD+    + + A    G +  GK++H + ++ GF   S   I 
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            +L+D+Y KC  +    + F Q+  +  ISW+++I GYAQ    ++A+ LF+ +Q     
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYSRN 417
            D   + S++   +    + Q K++    ++   GL +  +LN++VD+Y KCG +D +  
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL-ETSVLNSVVDMYLKCGLVDEAEK 369

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            F  ++ KDV+SWT +I+ Y  +GL  +++ +FY M   N+E D +  ++ LSA S   +
Sbjct: 370 CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429

Query: 478 LKKGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMI 535
           +K+G+EL +  +   G        + +VD+  R G L  A  + + +  K  + +W +++
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
           +   +HG    GK    +  +++A++  P +   ++ LY    +G  NE
Sbjct: 490 SLCRVHGDIELGKEVGKILLRIDAKN--PANYVMMSNLYG--QAGYWNE 534



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 232/442 (52%), Gaps = 8/442 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC   L A ++FD + +R V +W+A++  +V NG+    L  +S M   GI  + FT
Sbjct: 50  MYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFT 109

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +KAC +L  L+ G +IHG  LK G++    + NSLV MY+KC    +A ++F R+ 
Sbjct: 110 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV--TNAYTFVAALQACEDSSFETL 178
           ++  ++ WN++I+ +  +G   +AL  F  MQ   +    + +T  + L+AC  +     
Sbjct: 170 DR-SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 228

Query: 179 GMEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           G +IH   V+SG +      +  +L+ +Y +CG +  A     Q++ K  +SW+S++ G+
Sbjct: 229 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            Q   + +AM  F+ LQ    + D     + +        L  GK++ A A+K     + 
Sbjct: 289 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 348

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N+++DMY KC  V+   + F +M  +D ISWT +I GY ++    K++ +F  +   
Sbjct: 349 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 408

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNA-IVDVYGKCGNIDY 414
            ++ D +   +VL ACS    + + +E+   ++   G+   V   A +VD+ G+ G +  
Sbjct: 409 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468

Query: 415 SRNVFESIESKDVVS-WTSMIS 435
           ++++ +++  K  V  W +++S
Sbjct: 469 AKHLIDTMPIKPNVGIWQTLLS 490


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 237/657 (36%), Positives = 398/657 (60%), Gaps = 3/657 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  + SG     +++N+L+  Y  CG + +A  + +    K+ VSW  +++G  +ND
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKND 101

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +A+  FRE+     KP+ V   + + A   LG +   K +H + ++ GF  ++ +  
Sbjct: 102 CFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+K  C+    ++F  M+ ++ ++W  I++GY+ +    +A++LF  ++ +GL  
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D   I S++ A   + C+     IHG+IIR G  +D  I  A++D+Y     +D +  VF
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVF 281

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSLSIL 478
             +  KDV +WT M++ +      + A++ F  ++   N++ DSI L+  LS+ S    L
Sbjct: 282 SEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGAL 341

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           ++G+ ++   I+  F     V S+++DMYA CG L+ A + F  +  KD++ W +MI  N
Sbjct: 342 QQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGN 401

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
           G++G G  AIDLF +M+     PD  TF+++LYACSH+G++ EG +    M     + P 
Sbjct: 402 GMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPN 461

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            +HYAC++D+LGRA  L+ AY F+ +M  +P  +V+  LLGACR+H N +LG  +++K+ 
Sbjct: 462 LQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIF 521

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           E++P + G YVL+SN++A +  W+ V+  R  +R   +KK PG S IEI  +I++F+A +
Sbjct: 522 EMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGE 581

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           K H +  +I   L  +  K+ ++ GYV  T  +L +V ++ K  +LY HSE++AIA+G++
Sbjct: 582 KDHPQYFKIEGILKGLILKI-KKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLM 640

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++   ++IRITKNLR C DCH+  K VS++FGR LV++DANRFH F+ GVCSC DYW
Sbjct: 641 RTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 256/509 (50%), Gaps = 10/509 (1%)

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           LKDL    +IH  ++  G     F+ NSL+  Y  C     A+Q+F     K +VV W  
Sbjct: 34  LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYK-NVVSWTI 92

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +IS  + +   +EA+ +FREM       NA T  + L A  +     +   +H   V+ G
Sbjct: 93  LISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               V+V  AL+ MY++ G M  A  +   +  ++ V+WN++++G+  +    +A+  F 
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFN 212

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            ++  G   D    ++ + AS  +G L  G  +H + I+ G+ +D  I   LMD+Y    
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVL 369
           CV+   RVF +M+ +D  +WT ++ G++      +A++ F + + ++ L  D + +  +L
Sbjct: 273 CVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGIL 332

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            +CS    + Q + +H   I+   ++ + + +A++D+Y  CGN++ ++  F  +  KDVV
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV 392

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
            W +MI+    NG   +A++LF  M  + ++ D  T VS L A S   ++ +G ++   +
Sbjct: 393 CWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHM 452

Query: 489 IRKGF---NLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRG 544
           ++      NL+    + ++D+  R G LD A    N +    D  ++++++ A  +HG  
Sbjct: 453 VKTSHVIPNLQH--YACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNI 510

Query: 545 KVAIDLFYKM-EAESFAPDHITFLALLYA 572
           K+  ++  K+ E E     +   L+ +YA
Sbjct: 511 KLGHEISQKIFEMEPNDAGYYVLLSNMYA 539



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 208/415 (50%), Gaps = 4/415 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG + DA+Q+F     + V +W  ++     N   +  ++ +  M +     +A T 
Sbjct: 66  YVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTI 125

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ A A L  +     +H   ++ G++   F+  +LV MY+K      ARQLF+ M E
Sbjct: 126 SSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSE 185

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + +VV WN+I+S YS  G   EA+ LF  M+R GL+ + YT ++ + A        +G  
Sbjct: 186 R-NVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTG 244

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   +++G     ++  AL+ +Y     + +A  V  ++  KD  +W  MLTGF     
Sbjct: 245 IHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRH 304

Query: 242 YCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           + +A++ F ++ G    K D +  +  +S+    G L  G+ +HA AIK  F +++ +G+
Sbjct: 305 WDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGS 364

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++DMYA C  +    R FY M  +D + W  +IAG   N     A++LF  ++  GLD 
Sbjct: 365 AVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDP 424

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNID 413
           D     SVL ACS    + +  +I  ++++    + +L     ++D+ G+ G +D
Sbjct: 425 DESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLD 479



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 209/398 (52%), Gaps = 8/398 (2%)

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
            F+R L     +          S   +L +L   +++HA  I  G   +  + N+LM+ Y
Sbjct: 7   NFYRHLSSNPTQRLSPLAQPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAY 66

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
             C  +    ++F+    ++ +SWT +I+G A+N+C ++A+++FR + +     + + I 
Sbjct: 67  VYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTIS 126

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           SVL A + L  +   K +H + +R G   ++ +  A+VD+Y K G +  +R +FES+  +
Sbjct: 127 SVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER 186

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           +VV+W +++S Y  +G + EA++LF LM    +  D  T++S + A+ S+  L+ G  ++
Sbjct: 187 NVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIH 246

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
           GFIIR G+  +  + ++L+D+Y     +D A++VF+ +  KD+  WT M+          
Sbjct: 247 GFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWD 306

Query: 546 VAIDLFYKMEA-ESFAPDHITFLALLYACSHSGLINEGKKF--LEIMRCDYQLDPWPEHY 602
            AI  F KM   ++   D I  + +L +CSHSG + +G++   L I  C +  + +    
Sbjct: 307 RAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTC-FANNIFVG-- 363

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           + ++D+     +LE+A +F   M  E     W A++  
Sbjct: 364 SAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNAMIAG 400



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 159/330 (48%), Gaps = 10/330 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  A QLF+ +S+R V TWNA++  Y  +G     ++ ++ MR  G+ VD +T
Sbjct: 166 MYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYT 225

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I A   +  L  G  IHG +++ GY++   I  +L+ +Y        A ++F  M 
Sbjct: 226 IMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMS 285

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLG 179
            K DV  W  +++ +S+      A+  F +M  +  L  ++   +  L +C  S     G
Sbjct: 286 VK-DVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQG 344

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +HA  +K+     ++V +A+I MYA CG + +A    Y +  KD V WN+M+ G   N
Sbjct: 345 RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMN 404

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A+  F +++G+G  PD+   V+ + A    G +  G ++  + +K   V      
Sbjct: 405 GYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHV------ 458

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
             + ++    C ++ +GR      A  FI+
Sbjct: 459 --IPNLQHYACVIDILGRAGQLDAAYSFIN 486



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 11/199 (5%)

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGF------IIRKGFNLEGSVASSLVDMYARC 510
           ++ S+    +S L A    SIL+K K+L         II  G      +++SL++ Y  C
Sbjct: 11  HLSSNPTQRLSPL-AQPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYC 69

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G L  A ++F+    K+++ WT +I+    +     AID+F +M   +F P+ +T  ++L
Sbjct: 70  GLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVL 129

Query: 571 YACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
            A ++ GLI   K      +R  ++ + + E    LVD+  +   +  A Q   SM  E 
Sbjct: 130 PAFANLGLIRIAKSVHCFWVRGGFEGNVFVE--TALVDMYSKFGCMGVARQLFESMS-ER 186

Query: 630 TAEVWCALLGACRVHSNKE 648
               W A++     H   E
Sbjct: 187 NVVTWNAIVSGYSDHGFSE 205


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 281/874 (32%), Positives = 441/874 (50%), Gaps = 76/874 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVS-NGEPLRVLETYSRMRVLGISVDAFT 60
           Y + G    A ++F     R    WN+ L  + S  G+   +LE +  +   G+  D+  
Sbjct: 74  YLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKA 133

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+K C  L +L  G ++H  +LK G+     +  +L+ +Y KC    +A Q+FD   
Sbjct: 134 LTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETP 193

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +ED  LWN+I+ A   S +  +AL L R MQ         T V  LQAC        G 
Sbjct: 194 LQEDF-LWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGK 252

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   ++ G+     + N++++MY+R  ++  A  V    E+ +  SWNS+++ +  N 
Sbjct: 253 QIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNG 312

Query: 241 LYCKAMQFFRE-----------------------------------LQGAGQKPDQVCTV 265
               A   FRE                                   LQ AG KPD     
Sbjct: 313 CLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSIT 372

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           +A+ A   LG    GKE+H Y ++     D+ +  +L+DMY K  C+     VF+    +
Sbjct: 373 SALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNK 432

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           +  +W ++I+GY        A +L   ++ EG+ AD                        
Sbjct: 433 NICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKAD------------------------ 468

Query: 386 GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIES----KDVVSWTSMISSYVHNG 441
                     LV  N++V  Y   G  + +  V   I+S     +VVSWT+MIS    N 
Sbjct: 469 ----------LVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNE 518

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
              +AL+ F  M E NV+ +S T+ + L A +  S+LKKG+E++ F ++ GF  +  +A+
Sbjct: 519 NYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIAT 578

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           +L+DMY++ G L +A++VF  ++ K L  W  M+    ++G G+    LF  M      P
Sbjct: 579 ALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRP 638

Query: 562 DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
           D ITF ALL  C +SGL+ +G K+ + M+ DY ++P  EHY+C+VDLLG+A  L+EA  F
Sbjct: 639 DAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDF 698

Query: 622 VRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKW 681
           + +M  +  A +W A+L ACR+H + ++ EI A+ L  L+P N  NYVL+ N+++   +W
Sbjct: 699 IHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERW 758

Query: 682 KDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLERE 741
            DVE+++  M   G+K     SWI++   IH F    KSH E  EIY  L ++  ++++ 
Sbjct: 759 GDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKL 818

Query: 742 GGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSF 801
            GYV  T  V  N+++ EK ++L  H+E+LA+ YG++K   G+ IR+ KN R+C DCH+ 
Sbjct: 819 -GYVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTA 877

Query: 802 CKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            K +S    RE+ +RD  RFHHF  G CSC D W
Sbjct: 878 AKYISLARNREIFLRDGGRFHHFMNGECSCNDRW 911



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 154/585 (26%), Positives = 261/585 (44%), Gaps = 70/585 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  +  A Q+FD+   +  F WN ++ A + +      LE   RM+         T
Sbjct: 175 LYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGT 234

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +++AC  L+ L+ G +IHG V++ G  S   I NS+V+MY++      AR +FD   
Sbjct: 235 IVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDST- 293

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREM----------------------------- 151
           E  ++  WNSIIS+Y+ +G    A  LFREM                             
Sbjct: 294 EDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVL 353

Query: 152 ------QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
                 Q  G   ++ +  +ALQA  +  +  LG EIH   ++S     VYV  +L+ MY
Sbjct: 354 TNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMY 413

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
            +   + +A  V +  +NK+  +WNS+++G+    L+  A +   +++  G K D V   
Sbjct: 414 IKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWN 473

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           + VS     G  ++G    A A+                          + R+       
Sbjct: 474 SLVS-----GYSMSGCSEEALAV--------------------------INRIKSLGLTP 502

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           + +SWT +I+G  QN  +  AL+ F  +Q E +  +   I ++L AC+G   + + +EIH
Sbjct: 503 NVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIH 562

Query: 386 GYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
            + ++ G + D+ I  A++D+Y K G +  +  VF +I+ K +  W  M+  Y   G   
Sbjct: 563 CFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGE 622

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSL 503
           E   LF  M +  +  D+IT  + LS   +  ++  G K  +        N      S +
Sbjct: 623 EVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCM 682

Query: 504 VDMYARCGALDIANKVFNCV-QTKDLILWTSMINANGLHGRGKVA 547
           VD+  + G LD A    + + Q  D  +W +++ A  LH   K+A
Sbjct: 683 VDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIA 727


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/652 (38%), Positives = 390/652 (59%), Gaps = 6/652 (0%)

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G    + ++N LI MY +CG++  A  V  ++  ++ VSW +++ G +QN    +++  F
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            ++  +G KP+       + A G L  L  G+++H   +K GF     +GN+++DMY+KC
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             +N    +F  M  ++ ISW  +IAGY       KAL LF+ +Q  G   D     S L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
            ACS L  + +  +IH ++I  G     +  +  A++D+Y KCG +  +R VF  IE K 
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
           V+SWT++I  Y   G   E++ELF  + E++++ D   L S +   +  +++++GK+++ 
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHA 301

Query: 487 FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
           F I+    ++ SV +S++DMY +CG ++ A ++F+ +  +++I WT MI   G HG GK 
Sbjct: 302 FAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKE 361

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           AI LF +M+ +S  PD +T+LA+L  CSHSGL+ +G+++   +   + +    EHYAC+V
Sbjct: 362 AIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMV 421

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           DLLGRA  L+EA   V SM +E    +W  LL ACRVH + ELG+ V   LL LD  NP 
Sbjct: 422 DLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPV 481

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
           NYV++SN++A +  WK+ E++R  ++   LKK  G SW+EI  ++H F   D +H  +++
Sbjct: 482 NYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEK 541

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS--TEG- 783
           I++ L E+  +++ E GYV   ++ LH+VEEE K+  L  HSE+LAI   ++     EG 
Sbjct: 542 IHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGR 601

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +IR+ KNLRVC DCH F K +S++     VVRDANRFH FE G+CSC DYW
Sbjct: 602 KVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 254/453 (56%), Gaps = 17/453 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG +  A  +FD++ +R V +W A++  ++ NG PL  L  +S+M + G+  + FT
Sbjct: 16  MYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFT 75

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +KAC +L  LD G +IH + +K G+D  + + NS++ MY+KC    +A  +F+ M 
Sbjct: 76  FSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMP 135

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + +++ WN++I+ Y+ +G C +AL LF++MQ VG   + +TF + L+AC D      G 
Sbjct: 136 VR-NLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGN 194

Query: 181 EIHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IHA  +  G   ++   VA ALI +Y +CGK+  A  V   +E K  +SW +++ G+ Q
Sbjct: 195 QIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQ 254

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                ++M+ FR+L+ +  + D     + +        +  GK++HA+AIK     D+ +
Sbjct: 255 EGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISV 314

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N+++DMY KC  +N   R+F +M A++ ISWT +I GY ++    +A+ LF  +QL+  
Sbjct: 315 CNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDST 374

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
           + D +   +VL+ CS       G +  S+    HG   R     +     +VD+ G+ G 
Sbjct: 375 EPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKAR-----VEHYACMVDLLGRAGR 429

Query: 412 IDYSRNVFESIE-SKDVVSWTSMISS-YVHNGL 442
           +  ++N+ +S+    +V  W +++S+  VH  L
Sbjct: 430 LKEAKNLVDSMPLEANVGIWQTLLSACRVHGDL 462



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 272/511 (53%), Gaps = 13/511 (2%)

Query: 88  GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGL 147
           G+     + N L+ MY KC     A  +FDRM  K +VV W +++  +  +G  LE+L L
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRM-LKRNVVSWTALMCGHIQNGNPLESLLL 60

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           F +M   G+  N +TF   L+AC   +   +G +IH   VK+G ++   V N++I MY++
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
           CG++ EAA +   +  ++ +SWN+M+ G+       KA+  F+++Q  G   D+    + 
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQ--IGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           + A   LG +  G ++HA+ I  GF+  +   +   L+D+Y KC  +    RVF  +  +
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
             ISWT +I GYAQ     +++ELFR ++   +  D  I+ S++   +    + Q K++H
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 386 GYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
            + I+     D+ + N+I+D+Y KCG I+ +  +F  + +++V+SWT MI+ Y  +GL  
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSL 503
           EA+ LF  M   + E D +T ++ L   S   +++KG+E  +      G        + +
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACM 420

Query: 504 VDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESF 559
           VD+  R G L  A  + + +  + ++ +W ++++A  +HG    GK    +  ++++E+ 
Sbjct: 421 VDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSEN- 479

Query: 560 APDHITFLALLYACSHSGLINEGKKFLEIMR 590
            P +   ++ +YA   +G   E ++  E+++
Sbjct: 480 -PVNYVMMSNIYA--DAGYWKECERIRELVK 507


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/692 (36%), Positives = 409/692 (59%), Gaps = 38/692 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           + H   +++G     Y A+ L AM A      +  A  V  ++   +S +WN+++  +  
Sbjct: 48  QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107

Query: 239 NDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
                 ++  F ++    Q  P++      + A+  + +L  G+ LH  A+K    SD+ 
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N+L+  Y  C  ++   +VF  +  +D +SW ++I G+ Q     KALELF+ ++ E 
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           + A  + +  VL AC+ ++ +   +++  YI    ++ +L + NA++D+Y KCG+I+ ++
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287

Query: 417 NVFESIESKDVVSWTSM-------------------------------ISSYVHNGLANE 445
            +F+++E KD V+WT+M                               IS+Y  NG  NE
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347

Query: 446 ALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           AL +F+ L  + N++ + ITLVS LSA + +  L+ G+ ++ +I + G  +   V S+L+
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
            MY++CG L+ + +VFN V+ +D+ +W++MI    +HG G  A+D+FYKM+  +  P+ +
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF  +  ACSH+GL++E +     M  +Y + P  +HYAC+VD+LGR+ +LE+A +F+ +
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M I P+  VW ALLGAC++H+N  L E+   +LLEL+P N G +VL+SN++A   KW++V
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENV 587

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            ++R  MR +GLKK PG S IEI   IH F++ D +H  S+++Y KL E+ EKL +  GY
Sbjct: 588 SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKL-KSNGY 646

Query: 745 VAQTQFVLHNVEEEE-KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
             +   VL  +EEEE K Q L  HSE+LAI YG++ +    +IR+ KNLRVC DCHS  K
Sbjct: 647 EPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAK 706

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L+S+L+ RE++VRD  RFHHF  G CSC D+W
Sbjct: 707 LISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 256/522 (49%), Gaps = 42/522 (8%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA--KCYDFRKARQLFDRMGE 121
           +I+ C  L+ L    + HG +++ G  S  +  + L AM A         AR++FD +  
Sbjct: 36  LIERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI-P 91

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGM 180
           K +   WN++I AY++    + ++  F +M        N YTF   ++A  + S  +LG 
Sbjct: 92  KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   VKS     V+VAN+LI  Y  CG +  A  V   ++ KD VSWNSM+ GFVQ  
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA++ F++++    K   V  V  +SA  ++ NL  G+++ +Y  +     +L + N
Sbjct: 212 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA---------------------- 338
            ++DMY KC  +    R+F  M  +D ++WTT++ GYA                      
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331

Query: 339 ---------QNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
                    QN    +AL +F  +QL+  +  + + + S L AC+ +  +   + IH YI
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391

Query: 389 IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
            + G+  +  + +A++ +Y KCG+++ SR VF S+E +DV  W++MI     +G  NEA+
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL-NGFIIRKGFNLEGSVASSLVDM 506
           ++FY M EANV+ + +T  +   A S   ++ + + L +      G   E    + +VD+
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511

Query: 507 YARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKVA 547
             R G L+ A K    +       +W +++ A  +H    +A
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 553



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 223/464 (48%), Gaps = 41/464 (8%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS---VDAFTFPCVIKA 67
           A ++FD++ +   F WN ++ AY S  +P  VL  ++ + ++  S    + +TFP +IKA
Sbjct: 83  ARKVFDEIPKPNSFAWNTLIRAYASGPDP--VLSIWAFLDMVSESQCYPNKYTFPFLIKA 140

Query: 68  CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVL 127
            A +  L  G  +HG+ +K    S  F+ NSL+  Y  C D   A ++F  + EK DVV 
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK-DVVS 199

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           WNS+I+ +   G   +AL LF++M+   +  +  T V  L AC        G ++ +   
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV---------- 237
           ++  N+ + +ANA++ MY +CG + +A  +   +E KD+V+W +ML G+           
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319

Query: 238 ---------------------QNDLYCKAMQFFRELQ-GAGQKPDQVCTVNAVSASGRLG 275
                                QN    +A+  F ELQ     K +Q+  V+ +SA  ++G
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            L  G+ +H+Y  K G   +  + + L+ MY+KC  +     VF  +  +D   W+ +I 
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI-HGYIIRKGL- 393
           G A + C  +A+++F  +Q   +  + +   +V  ACS    + + + + H      G+ 
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
            +      IVDV G+ G ++ +    E++      S W +++ +
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 167/364 (45%), Gaps = 41/364 (11%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG +  A ++F  + ++ V +WN+M+  +V  G P + LE + +M    +     T 
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA +++L+ G ++   + +   +    + N+++ MY KC     A++LFD M E
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295

Query: 122 KE------------------------------DVVLWNSIISAYSASGQCLEALGLFREM 151
           K+                              D+V WN++ISAY  +G+  EAL +F E+
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355

Query: 152 Q-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           Q +  +  N  T V+ L AC       LG  IH+   K G  +  +V +ALI MY++CG 
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD 415

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           + ++  V   +E +D   W++M+ G   +    +A+  F ++Q A  KP+ V   N   A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475

Query: 271 SGRLGNLLNGKEL-HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
               G +   + L H      G V + +        YA  C V+ +GR  Y   A  FI 
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEK-------HYA--CIVDVLGRSGYLEKAVKFIE 526

Query: 330 WTTI 333
              I
Sbjct: 527 AMPI 530



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 220/465 (47%), Gaps = 56/465 (12%)

Query: 259 PDQVCTVNA----VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA--KCCCV 312
           P+Q  T N     +S   R  +L   K+ H + I+ G  SD    + L  M A      +
Sbjct: 21  PNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASL 80

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMA 371
            Y  +VF ++   +  +W T+I  YA     + ++  F  +  E     +      ++ A
Sbjct: 81  EYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140

Query: 372 CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
            + +  +S  + +HG  ++  + SD+ + N+++  Y  CG++D +  VF +I+ KDVVSW
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSW 200

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
            SMI+ +V  G  ++ALELF  M   +V++  +T+V  LSA + +  L+ G+++  +I  
Sbjct: 201 NSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE 260

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL---------- 540
              N+  ++A++++DMY +CG+++ A ++F+ ++ KD + WT+M++   +          
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320

Query: 541 ---------------------HGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACSHSGL 578
                                +G+   A+ +F++++ + +   + IT ++ L AC+  G 
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380

Query: 579 INEGKKFLEI-----MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           +  G+          +R ++ +       + L+ +  +   LE++ +   S++ +    V
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVT------SALIHMYSKCGDLEKSREVFNSVE-KRDVFV 433

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGN-PGNYVLISNVFAA 677
           W A++G   +H     G        ++   N   N V  +NVF A
Sbjct: 434 WSAMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 33/202 (16%)

Query: 1   MYGKCGSVLDAEQLFD-------------------------------KVSQRTVFTWNAM 29
           MY KCGS+ DA++LFD                                + Q+ +  WNA+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335

Query: 30  LGAYVSNGEPLRVLETYSRMRVL-GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
           + AY  NG+P   L  +  +++   + ++  T    + ACA +  L+ G  IH  + K G
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
                 + ++L+ MY+KC D  K+R++F+ + EK DV +W+++I   +  G   EA+ +F
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSV-EKRDVFVWSAMIGGLAMHGCGNEAVDMF 454

Query: 149 REMQRVGLVTNAYTFVAALQAC 170
            +MQ   +  N  TF     AC
Sbjct: 455 YKMQEANVKPNGVTFTNVFCAC 476



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  + ++F+ V +R VF W+AM+G    +G     ++ + +M+   +  +  T
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V  AC+    +D    + H +    G    +     +V +  +     KA +  + M
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528

Query: 120 GEKEDVVLWNSIISA 134
                  +W +++ A
Sbjct: 529 PIPPSTSVWGALLGA 543


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 245/684 (35%), Positives = 398/684 (58%), Gaps = 4/684 (0%)

Query: 155 GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEA 214
           G+  N  TF+  L +  D      G  IH+   +S  +L V+V  AL+  Y +CG +T+A
Sbjct: 5   GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDA 64

Query: 215 AGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
             V   +  +   +WNSM++ +  ++   +A   F+ +Q  G++ D+V  ++ + A    
Sbjct: 65  RKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNP 124

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
            NL +GK +     +  F  DL +G  L+ MYA+C       +VF +M  ++ I+W+ II
Sbjct: 125 ENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAII 184

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
             +A +    +AL  FR +Q EG+  + +   S+L   +    + +   IH  I   GL 
Sbjct: 185 TAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD 244

Query: 395 DLVIL-NAIVDVYGKC--GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
           D   + NA+V+VYG+C  G +D +  + + ++ + + +W  +I+ Y  +G + EALE + 
Sbjct: 245 DTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQ 304

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
            +    +  D +T +S L+A +S + L +GK ++   +  G + +  V ++L +MY++CG
Sbjct: 305 RLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCG 364

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
           +++ A ++F+ +  +  + W  M+ A   HG  +  + L  KME E    + ITF+++L 
Sbjct: 365 SMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLS 424

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           +CSH+GLI EG ++   +  D  ++   EHY CLVDLLGRA  L+EA +++  M  EP  
Sbjct: 425 SCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEI 484

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
             W +LLGACRVH + + G++ A+KLLELDPGN    V++SN+++    WK+  ++R  M
Sbjct: 485 VTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAM 544

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
               +KK PG S I++ NK+H F  RD SH  + EIY K+ E+   + RE GYV  T+ V
Sbjct: 545 ASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAM-REAGYVPDTKMV 603

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           LH+V+EE+K  +L  HSE+LAIA+G++ + E S + I KNLRVC DCH+  K +S++ GR
Sbjct: 604 LHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGR 663

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E+VVRD +RFHHF  G CSC DYW
Sbjct: 664 EIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 260/507 (51%), Gaps = 9/507 (1%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M + G+  +  TF  V+ +      L  G  IH  V +  +    F+  +LV  Y KC  
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              AR++FD M  +  V  WNS+ISAYS S +  EA  +F+ MQ  G   +  TF++ L 
Sbjct: 61  LTDARKVFDGMPCR-SVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILD 119

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           AC +      G  +  +  ++   L ++V  ALI MYARC     AA V  +++ K+ ++
Sbjct: 120 ACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLIT 179

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           W++++T F  +    +A+++FR +Q  G  P++V  ++ ++       L     +H    
Sbjct: 180 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 239

Query: 289 KQGFVSDLQIGNTLMDMYAKCCC--VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
           + G      + N L+++Y +C    ++    +  +M  Q   +W  +I GY  +    +A
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREA 299

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDV 405
           LE ++ +QLE +  D +   SVL AC+    +++ K IH   +  GL SD+++ NA+ ++
Sbjct: 300 LETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNM 359

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y KCG+++ +R +F+S+  +  VSW  M+ +Y  +G + E L+L   M +  V+ + IT 
Sbjct: 360 YSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITF 419

Query: 466 VSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
           VS LS+ S   ++ +G +  +     +G  ++      LVD+  R G L  A K  + + 
Sbjct: 420 VSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMP 479

Query: 525 TK-DLILWTSMINANGLH---GRGKVA 547
           ++ +++ W S++ A  +H    RGK+A
Sbjct: 480 SEPEIVTWASLLGACRVHKDLDRGKLA 506



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 235/448 (52%), Gaps = 9/448 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCGS+ DA ++FD +  R+V TWN+M+ AY  +         + RM+  G   D  TF
Sbjct: 55  YTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTF 114

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ AC   ++L  G  +   + +  ++   F+  +L+ MYA+C     A Q+F RM +
Sbjct: 115 LSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQ 174

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA-CEDSSFETLGM 180
           K +++ W++II+A++  G C EAL  FR MQ+ G++ N  TF++ L      S  E L  
Sbjct: 175 K-NLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELS- 232

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARC--GKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            IH    + G +    ++NAL+ +Y RC  G++  A  +L +++ +   +WN ++ G+  
Sbjct: 233 RIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTL 292

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +    +A++ ++ LQ      D+V  ++ ++A     +L  GK +H+ A++ G  SD+ +
Sbjct: 293 HGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIV 352

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L +MY+KC  +    R+F  M  +  +SW  ++  YAQ+    + L+L R ++ EG+
Sbjct: 353 KNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGV 412

Query: 359 DADVMIIGSVLMACSGLKCMSQ-TKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
             + +   SVL +CS    +++  +  H     +G+         +VD+ G+ G +  + 
Sbjct: 413 KLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAE 472

Query: 417 NVFESIESK-DVVSWTSMISS-YVHNGL 442
                + S+ ++V+W S++ +  VH  L
Sbjct: 473 KYISKMPSEPEIVTWASLLGACRVHKDL 500



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 169/340 (49%), Gaps = 5/340 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +C S  +A Q+F ++ Q+ + TW+A++ A+  +G     L  +  M+  GI  +  T
Sbjct: 155 MYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVT 214

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY--DFRKARQLFDR 118
           F  ++        L+  ++IH L+ + G D T  + N+LV +Y +C   +   A  +   
Sbjct: 215 FISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQE 274

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M E++ +  WN +I+ Y+  G+  EAL  ++ +Q   +  +  TF++ L AC  S+    
Sbjct: 275 MDEQQ-ITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAE 333

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  IH+  V+ G +  V V NAL  MY++CG M  A  +   +  + +VSWN ML  + Q
Sbjct: 334 GKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQ 393

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDLQ 297
           +    + ++  R+++  G K + +  V+ +S+    G +  G +  H+    +G     +
Sbjct: 394 HGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTE 453

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG 336
               L+D+  +   +    +   +M ++ + ++W +++  
Sbjct: 454 HYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGA 493


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 233/584 (39%), Positives = 361/584 (61%), Gaps = 16/584 (2%)

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK--------------CCCV 312
           A+ +   LG    G  LHA A++ G  +D    N L+++Y K                 +
Sbjct: 64  ALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVL 123

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
             + +VF +M  +D +SW T++ G A++  H +AL L R +  +G   D   + SVL   
Sbjct: 124 ESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIF 183

Query: 373 SGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           +    + +  E+HG+  R G  D V + ++++D+Y  C   DYS  VF+++  +D + W 
Sbjct: 184 AEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWN 243

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           SM++    NG  +EAL LF  M  + ++   +T  S + A  +L+ L  GK+L+ ++IR 
Sbjct: 244 SMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRG 303

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           GF+    ++SSL+DMY +CG + IA ++F+ +Q+ D++ WT+MI  + LHG  + A+ LF
Sbjct: 304 GFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLF 363

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
            +ME  +  P+HITFLA+L ACSH+GL+++G K+   M   Y + P  EH+A L D LGR
Sbjct: 364 DRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGR 423

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
              LEEAY F+  M+I+PTA VW  LL AC+VH N  L E VAKK+ +L+P + G+++++
Sbjct: 424 PGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIIL 483

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           SN +++S +W +   +R  MR  G++K P  SWIE+ NK H F+A DKSH   + I   L
Sbjct: 484 SNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDAL 543

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKN 791
              +E++ R+ GYV  T  V  ++EEE+K  +L GHSE+LAI +G++ +  G+ IR+ KN
Sbjct: 544 NVFSEQMVRQ-GYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKN 602

Query: 792 LRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           LRVCVDCH+  K +S++ GRE+V+RDANRFHHF+ G+CSCGD+W
Sbjct: 603 LRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 216/436 (49%), Gaps = 32/436 (7%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRV----LGISVDAFTFPCVIKACAMLKDLDCGAKI 80
           +W   +    S G+    +  + RMR        S    + P  +K+CA L     GA +
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 81  HGLVLKCGYDSTDFIVNSLVAMYAKCYD--------------FRKARQLFDRMGEKEDVV 126
           H L L+ G  +  F  N+L+ +Y K                     R++FD M EK DVV
Sbjct: 81  HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEK-DVV 139

Query: 127 LWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
            WN+++   + SG+  EALGL REM R G   +++T  + L    + +    GME+H   
Sbjct: 140 SWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFA 199

Query: 187 VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAM 246
            ++G +  V+V ++LI MYA C +   +  V   L  +D++ WNSML G  QN    +A+
Sbjct: 200 TRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEAL 259

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
             FR +  +G KP  V   + + A G L +LL GK+LHAY I+ GF  ++ I ++L+DMY
Sbjct: 260 GLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMY 319

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
            KC  V+   R+F ++ + D +SWT +I G+A +    +AL LF  ++L  L  + +   
Sbjct: 320 CKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFL 379

Query: 367 SVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
           +VL ACS       G K  +   + +G +       L    A+ D  G+ G ++ + N  
Sbjct: 380 AVLTACSHAGLVDKGWKYFNSMSDHYGIV-----PSLEHHAALADTLGRPGKLEEAYNFI 434

Query: 420 ESIESKDVVS-WTSMI 434
             ++ K   S W++++
Sbjct: 435 SGMKIKPTASVWSTLL 450



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 151/298 (50%), Gaps = 2/298 (0%)

Query: 12  EQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML 71
            ++FD++ ++ V +WN ++     +G     L     M   G   D+FT   V+   A  
Sbjct: 127 RKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEG 186

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
            D+  G ++HG   + G+    F+ +SL+ MYA C     + ++FD +  + D +LWNS+
Sbjct: 187 ADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DAILWNSM 245

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           ++  + +G   EALGLFR M   G+     TF + + AC + +   LG ++HA  ++ G 
Sbjct: 246 LAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGF 305

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
           +  V+++++LI MY +CG ++ A  +  ++++ D VSW +M+ G   +    +A+  F  
Sbjct: 306 DGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDR 365

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           ++    KP+ +  +  ++A    G +  G K  ++ +   G V  L+    L D   +
Sbjct: 366 MELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGR 423



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 114/240 (47%), Gaps = 13/240 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C     + ++FD +  R    WN+ML     NG     L  + RM   GI     T
Sbjct: 217 MYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVT 276

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +I AC  L  L  G ++H  V++ G+D   FI +SL+ MY KC +   AR++FDR+ 
Sbjct: 277 FSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRI- 335

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG- 179
           +  D+V W ++I  ++  G   EAL LF  M+   L  N  TF+A L AC  +     G 
Sbjct: 336 QSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGW 395

Query: 180 -----MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
                M  H   V S ++       AL     R GK+ EA   +  ++ K + S W+++L
Sbjct: 396 KYFNSMSDHYGIVPSLEHHA-----ALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLL 450


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/708 (35%), Positives = 406/708 (57%), Gaps = 68/708 (9%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V+  N +++ YA+ G++ EA  V  ++   DSVSW +M+ G+ Q   +  A+  FRE+  
Sbjct: 79  VFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVS 138

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC---- 310
               P Q    N +++   +  L  G+++H++ +K G  S + + N+L++MYAK      
Sbjct: 139 DDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198

Query: 311 ---------------------------CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
                                       V+     F QM  +D +SW  +I+GY Q+   
Sbjct: 199 AKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFD 258

Query: 344 LKALELFRTVQLEGLD-ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-------- 394
            +AL++F  + ++     D   + S L AC+ L+ +   K+IH +IIR            
Sbjct: 259 REALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNA 318

Query: 395 --------------------------DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
                                     D++   A++D Y K G+I+ +R +F+S+  +DVV
Sbjct: 319 LISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVV 378

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           +WT+MI  YV NG   +A+ELF  M +   + ++ TL + LS +SSL+ L  G++++   
Sbjct: 379 AWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASA 438

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA 547
            R G     SV+++L+ MYA+ G+++ A  VFN +  K D I WTSMI A   HG G+ A
Sbjct: 439 TRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEA 498

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           + LF +M      PDHIT++ +L AC+H GL+ +G+ +  +M+  +++ P P HYAC++D
Sbjct: 499 LTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMID 558

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
           L GRA  L+EA+ F+ +M IEP    W +LL +C+VH N EL E+ A++LL ++P N G 
Sbjct: 559 LFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGA 618

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
           Y  ++NV++A  +W++   +R  M+  G+KK  G SW++I NK+H F   D  H + D I
Sbjct: 619 YSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAI 678

Query: 728 YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIR 787
           Y+ +A+I +++++  G+V  T+ VLH++EEE K Q+L  HSE+LAIA+G++ + E + +R
Sbjct: 679 YEMMAKIWKEIKKM-GFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLR 737

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           I KNLRVC DCHS  K +S+L GRE++VRDA RFHHF+ G+CSC DYW
Sbjct: 738 IMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 161/605 (26%), Positives = 271/605 (44%), Gaps = 104/605 (17%)

Query: 43  LETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAM 102
           +ET S  ++L    D +T    ++     KD   G  IH  ++K G     F++N+L+  
Sbjct: 1   METSSS-QILTSPSDPYT--SFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNF 57

Query: 103 YAKCYDFRKARQLFDRMGEK------------------------------EDVVLWNSII 132
           YAK      A ++FD M  K                               D V W ++I
Sbjct: 58  YAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMI 117

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
             Y+  GQ   A+G+FREM    +    +T    L +C       +G ++H+  VK G +
Sbjct: 118 VGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLS 177

Query: 193 LQVYVANALIAMYARCGKMTEAAGV-------------------------------LYQL 221
             + VAN+L+ MYA+ G    A  V                                 Q+
Sbjct: 178 SYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQM 237

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
             +D VSWN+M++G+ Q+    +A+  F + L  +  KPD+    +A+SA   L NL  G
Sbjct: 238 IERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLG 297

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV---------------------------- 312
           K++HA+ I+  F +   +GN L+ MY+K   V                            
Sbjct: 298 KQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYV 357

Query: 313 -----NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
                N   R+F  +  +D ++WT +I GY QN  +  A+ELFR++  EG   +   + +
Sbjct: 358 KLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLAT 417

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SK 425
           +L   S L  +   ++IH    R G  S + + NA++ +Y K G+I+ +R VF  I   +
Sbjct: 418 MLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKR 477

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           D ++WTSMI +   +GL  EAL LF  M E  ++ D IT V  LSA + + ++++G+   
Sbjct: 478 DTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYY 537

Query: 486 GFIIRKGFNL--EGSVASSLVDMYARCGALDIANK-VFNCVQTKDLILWTSMINANGLHG 542
             +++    +    S  + ++D++ R G L  A+  + N     D+I W S++ +  +H 
Sbjct: 538 N-LMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHK 596

Query: 543 RGKVA 547
             ++A
Sbjct: 597 NVELA 601



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 247/558 (44%), Gaps = 102/558 (18%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLET------------- 45
           Y K G + DA ++FD++  ++VF+WN +L  Y   G   E  RV E              
Sbjct: 58  YAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMI 117

Query: 46  --YSRM----RVLG---------ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYD 90
             Y++M      +G         +    FT   V+ +CA ++ L  G K+H  V+K G  
Sbjct: 118 VGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLS 177

Query: 91  STDFIVNSLVAMYAKCYDFRKARQLFDRMGEK---------------------------- 122
           S   + NSL+ MYAK  D   A+ +FDRM  K                            
Sbjct: 178 SYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQM 237

Query: 123 --EDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLG 179
              DVV WN++IS Y+  G   EAL +F +M        + +T  +AL AC +     LG
Sbjct: 238 IERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLG 297

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ------------------- 220
            +IHA  +++  +    V NALI+MY++ G +  A  ++ Q                   
Sbjct: 298 KQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYV 357

Query: 221 --------------LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
                         L  +D V+W +M+ G+VQN     AM+ FR +   G KP+      
Sbjct: 358 KLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLAT 417

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT-AQ 325
            +S S  L +L +G+++HA A + G  S + + N L+ MYAK   +N    VF  +   +
Sbjct: 418 MLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKR 477

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           D I+WT++I   AQ+    +AL LF  +   G+  D +    VL AC+ +  + Q +  +
Sbjct: 478 DTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYY 537

Query: 386 GYI--IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS-YVHNG 441
             +    K +        ++D++G+ G +  +    E++    DV++W S+++S  VH  
Sbjct: 538 NLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKN 597

Query: 442 --LANEALELFYLMNEAN 457
             LA  A E   L+   N
Sbjct: 598 VELAEVAAERLLLIEPEN 615



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 186/395 (47%), Gaps = 79/395 (20%)

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQ------------IGNTLMDMYAKCCCVNYM 315
           + A   LG  L    ++ YA K GF+ D                N ++  YAK   +   
Sbjct: 40  IKAGLHLGVFLMNNLMNFYA-KTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEA 98

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
            RVF +M   D +SWT +I GY Q      A+ +FR +  + +      + +VL +C+ +
Sbjct: 99  HRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAV 158

Query: 376 KCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGN----------------------- 411
           +C+   +++H ++++ GLS  + + N+++++Y K G+                       
Sbjct: 159 ECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMI 218

Query: 412 --------IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVESDS 462
                   +D ++  FE +  +DVVSW +MIS Y  +G   EAL++F  ++ +++ + D 
Sbjct: 219 SSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDK 278

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK---- 518
            TL SALSA ++L  LK GK+++  IIR  F+  G+V ++L+ MY++ G ++IA K    
Sbjct: 279 FTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQ 338

Query: 519 -----------------------------VFNCVQTKDLILWTSMINANGLHGRGKVAID 549
                                        +F+ ++ +D++ WT+MI     +G  + A++
Sbjct: 339 SMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAME 398

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           LF  M  E   P++ T   +L   S    ++ G++
Sbjct: 399 LFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQ 433



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 2/136 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVS-QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY K GS+ DA  +F+ +  +R   TW +M+ A   +G     L  + RM   GI  D  
Sbjct: 456 MYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHI 515

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           T+  V+ AC  +  ++ G   + L+        T      ++ ++ +    ++A    + 
Sbjct: 516 TYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIEN 575

Query: 119 MGEKEDVVLWNSIISA 134
           M  + DV+ W S++++
Sbjct: 576 MPIEPDVIAWGSLLAS 591


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 243/675 (36%), Positives = 394/675 (58%), Gaps = 35/675 (5%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           ++  NAL++  A    +++   +   +  +D VS+N+++ GF     + +A++ +  L  
Sbjct: 72  LFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQ 131

Query: 255 AGQ--KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK---- 308
           A    +P ++     V A+  LG+   GK+ H   ++ GF ++  +G+ L+DMYAK    
Sbjct: 132 ADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLV 191

Query: 309 ---------------------------CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
                                      C  V    R+F  MT +D I+WTT++ G+ QN 
Sbjct: 192 GDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNG 251

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-N 400
              +ALE+FR ++ +G+  D    GS+L AC  L  + Q K+IH YIIR    D V + +
Sbjct: 252 LESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGS 311

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A+VD+Y KC +I  +  VF  +  K+++SWT++I  Y  NG + EA+ +F  M    ++ 
Sbjct: 312 ALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDP 371

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D  TL S +S+ ++L+ L++G + +   +  G     +V+++LV +Y +CG+++ A+++F
Sbjct: 372 DDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
           + +   D + WT++++     GR K  IDLF KM A+   PD +TF+ +L ACS +G + 
Sbjct: 432 DEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVE 491

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           +G+ +   M+ D+ + P  +HY C++DL  R+  L+EA +F++ M + P A  W  LL A
Sbjct: 492 KGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551

Query: 641 CRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTP 700
           CR+  + E+G+  A+ LLE+DP NP +YVL+ ++ AA  +W +V Q+R  MR   +KK P
Sbjct: 552 CRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEP 611

Query: 701 GSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEK 760
           G SWI+  NK+H F A D+SH  S  IY+KL  +  K+  E GY      VLH+V + +K
Sbjct: 612 GCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEE-GYKPDVSSVLHDVADTDK 670

Query: 761 VQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANR 820
           V M+  HSE+LAIA+G++   +   IRI KNLRVCVDCH+  K +S++ GR+++VRDA R
Sbjct: 671 VHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVR 730

Query: 821 FHHFEAGVCSCGDYW 835
           FH F  GVCSCGD+W
Sbjct: 731 FHKFSDGVCSCGDFW 745



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 165/614 (26%), Positives = 291/614 (47%), Gaps = 86/614 (14%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +  ++ A A  +    GA +H ++L+   +    +++N L+  Y K     +AR++FD M
Sbjct: 9   YAALLSAAARTEPHVAGA-LHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVFDAM 67

Query: 120 GE------------------------------KEDVVLWNSIISAYSASGQCLEALGLFR 149
                                           + D+V +N++I+ +S  G   +A+ ++ 
Sbjct: 68  PHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYL 127

Query: 150 EMQ------RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
            +       R   +T + T V A  A  D +   LG + H   ++ G     +V + L+ 
Sbjct: 128 ALLQADSSVRPSRITMS-TMVMAASALGDRA---LGKQFHCQILRLGFGANAFVGSPLVD 183

Query: 204 MYA-------------------------------RCGKMTEAAGVLYQ-LENKDSVSWNS 231
           MYA                               RC KM E A  L++ + ++DS++W +
Sbjct: 184 MYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRC-KMVEEARRLFEVMTDRDSITWTT 242

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M+TGF QN L  +A++ FR ++  G   DQ    + ++A G L  L  GK++HAY I+  
Sbjct: 243 MVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTR 302

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           +  ++ +G+ L+DMY+KC  +     VF +MT ++ ISWT +I GY QN C  +A+ +F 
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFS 362

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCG 410
            +Q +G+D D   +GSV+ +C+ L  + +  + H   +  GL   + + NA+V +YGKCG
Sbjct: 363 EMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
           +I+ +  +F+ +   D VSWT+++S Y   G A E ++LF  M    V+ D +T +  LS
Sbjct: 423 SIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLS 482

Query: 471 AASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT-KDL 528
           A S    ++KG+   +      G        + ++D+Y+R G L  A +    +    D 
Sbjct: 483 ACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDA 542

Query: 529 ILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           I W ++++A  L G    GK A +   +++ ++  P     L  ++A    G  NE  + 
Sbjct: 543 IGWGTLLSACRLRGDMEIGKWAAENLLEIDPQN--PASYVLLCSMHAA--KGQWNEVAQL 598

Query: 586 LEIMRCDYQLDPWP 599
              MR D Q+   P
Sbjct: 599 RRGMR-DRQVKKEP 611



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 223/468 (47%), Gaps = 47/468 (10%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA--FTFPCVIKA 67
           D E LF  ++QR + ++NA++  +   G   + +  Y  +     SV     T   ++ A
Sbjct: 90  DMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMA 149

Query: 68  CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK---------------------- 105
            + L D   G + H  +L+ G+ +  F+ + LV MYAK                      
Sbjct: 150 ASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMY 209

Query: 106 ---------CYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
                    C    +AR+LF+ M ++ D + W ++++ ++ +G   EAL +FR M+  G+
Sbjct: 210 NTMITGLLRCKMVEEARRLFEVMTDR-DSITWTTMVTGFTQNGLESEALEIFRRMRFQGI 268

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YTF + L AC   S    G +IHA  +++  +  V+V +AL+ MY++C  +  A  
Sbjct: 269 AIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAET 328

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V  ++  K+ +SW +++ G+ QN    +A++ F E+Q  G  PD     + +S+   L +
Sbjct: 329 VFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLAS 388

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G + H  A+  G +  + + N L+ +Y KC  +    R+F +M+  D +SWT +++G
Sbjct: 389 LEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSG 448

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYII 389
           YAQ     + ++LF  +  +G+  D +    VL ACS       G       ++ HG + 
Sbjct: 449 YAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIV- 507

Query: 390 RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
              + D      ++D+Y + G +  +    + +    D + W +++S+
Sbjct: 508 --PIDDH--YTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 196/395 (49%), Gaps = 11/395 (2%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           +C  V +A +LF+ ++ R   TW  M+  +  NG     LE + RMR  GI++D +TF  
Sbjct: 218 RCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGS 277

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++ AC  L  L+ G +IH  +++  YD   F+ ++LV MY+KC   + A  +F RM  K 
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCK- 336

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +++ W ++I  Y  +G   EA+ +F EMQR G+  + YT  + + +C + +    G + H
Sbjct: 337 NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFH 396

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              + SG    + V+NAL+ +Y +CG + +A  +  ++   D VSW ++++G+ Q     
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAK 456

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIGNTL 302
           + +  F ++   G KPD V  +  +SA  R G +  G+   H+     G V        +
Sbjct: 457 ETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCM 516

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKA-LELFRTVQLEGLDA 360
           +D+Y++   +        QM    D I W T+++      C L+  +E+ +      L+ 
Sbjct: 517 IDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA-----CRLRGDMEIGKWAAENLLEI 571

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           D     S ++ CS      Q  E+    +R+G+ D
Sbjct: 572 DPQNPASYVLLCSMHAAKGQWNEVAQ--LRRGMRD 604



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 118/237 (49%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC S+  AE +F +++ + + +W A++  Y  NG     +  +S M+  GI  D +T
Sbjct: 316 MYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYT 375

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +CA L  L+ GA+ H L L  G      + N+LV +Y KC     A +LFD M 
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM- 434

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V W +++S Y+  G+  E + LF +M   G+  +  TF+  L AC  + F   G 
Sbjct: 435 SFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGR 494

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
              H+     G          +I +Y+R GK+ EA   + Q+  + D++ W ++L+ 
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 140/314 (44%), Gaps = 40/314 (12%)

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF--Y 451
            +L   NA++        +     +F S+  +D+VS+ ++I+ +   G   +A+ ++   
Sbjct: 70  PNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLAL 129

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA--- 508
           L  +++V    IT+ + + AAS+L     GK+ +  I+R GF     V S LVDMYA   
Sbjct: 130 LQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMS 189

Query: 509 ----------------------------RCGALDIANKVFNCVQTKDLILWTSMINANGL 540
                                       RC  ++ A ++F  +  +D I WT+M+     
Sbjct: 190 LVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQ 249

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWP 599
           +G    A+++F +M  +  A D  TF ++L AC     + +GK+    I+R  Y  + + 
Sbjct: 250 NGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFV 309

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL-GACRVHSNKELGEIVAKKLL 658
              + LVD+  +   ++ A    R M  +     W AL+ G  +   ++E   + ++  +
Sbjct: 310 G--SALVDMYSKCRSIKLAETVFRRMTCKNIIS-WTALIVGYGQNGCSEEAVRVFSE--M 364

Query: 659 ELDPGNPGNYVLIS 672
           + D  +P +Y L S
Sbjct: 365 QRDGIDPDDYTLGS 378


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/739 (35%), Positives = 406/739 (54%), Gaps = 74/739 (10%)

Query: 170 CEDSSFETLGM--EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           C +S+  +L    + HA  +K+G     ++A  L++ YA      +A  VL  +   +  
Sbjct: 21  CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVF 80

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           S+++++  F +   +  A+  F ++   G  PD     +AV A   L  L   +++H  A
Sbjct: 81  SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIA 140

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC----- 342
              GF SD  + ++L+ MY KC  +    RVF +M   D +SW+ ++A YA+  C     
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200

Query: 343 ------------------------------HLKALELFRTVQLEGLDADVMIIGSVLMAC 372
                                         + +A+ +F  + L G + D   I SVL A 
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260

Query: 373 SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKC---------------------- 409
             L+ +     IHGY+I++GL SD  + +A++D+YGKC                      
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320

Query: 410 ---------GNIDYSRNVFESIESK----DVVSWTSMISSYVHNGLANEALELFYLMNEA 456
                    G ++ S  +F  ++ +    +VVSWTSMI+    NG   EALELF  M  A
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIA 380

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            V+ +S+T+   L A  +++ L  GK  + F +R+G + +  V S+L+DMYA+CG +  +
Sbjct: 381 GVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQAS 440

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
              F+ + TK+L+ W ++I    +HG+ K A+++F  M+     PD I+F  +L ACS S
Sbjct: 441 RICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQS 500

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           GL  EG  +   M   Y ++   EHYAC+V LL RA  LE+AY  +R M + P A VW A
Sbjct: 501 GLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGA 560

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL +CRVH+N  LGE+ A+KL EL+P NPGNY+L+SN++A+   W +V +VR  M+  GL
Sbjct: 561 LLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGL 620

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           +K PG SWIE+ NK+H  +A DKSH +  +I +KL +++ ++++  GY  +  FVL +VE
Sbjct: 621 RKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKL-GYFPEINFVLQDVE 679

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           E++K Q+L GHSE+LA+ +G+L +  G  +++ KNLR+C DCH   K +S    RE+ VR
Sbjct: 680 EQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVR 739

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D NRFHHF+ G CSCGDYW
Sbjct: 740 DTNRFHHFKEGACSCGDYW 758



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 162/612 (26%), Positives = 282/612 (46%), Gaps = 84/612 (13%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
           SV    F C+    A L       + H  +LK G  +   +   L++ YA    F  A  
Sbjct: 13  SVQHTIFNCLNSTTASLSQT---RQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATL 69

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           + D + E  +V  ++++I A+S   Q   AL  F +M   GL+ +     +A++AC   S
Sbjct: 70  VLDLVPEP-NVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLS 128

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV------- 227
                 ++H     SG +   +V ++L+ MY +C ++ +A  V  ++   D V       
Sbjct: 129 ALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVA 188

Query: 228 ----------------------------SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP 259
                                       SWN M+ GF  + LY +A+  F ++   G +P
Sbjct: 189 AYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEP 248

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D     + + A G L +L+ G  +H Y IKQG VSD  + + L+DMY KC C + M +VF
Sbjct: 249 DGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVF 308

Query: 320 YQMTAQD-----------------------------------FISWTTIIAGYAQNNCHL 344
            QM   D                                    +SWT++IA  +QN   +
Sbjct: 309 DQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDI 368

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIV 403
           +ALELFR +Q+ G+  + + I  +L AC  +  +   K  H + +R+G+S D+ + +A++
Sbjct: 369 EALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALI 428

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y KCG I  SR  F+ I +K++V W ++I+ Y  +G A EA+E+F LM  +  + D I
Sbjct: 429 DMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDII 488

Query: 464 TLVSALSAASSLSILKKGK-ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
           +    LSA S   + ++G    N    + G        + +V + +R G L+ A  +   
Sbjct: 489 SFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRR 548

Query: 523 VQ-TKDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           +    D  +W +++++  +H     G+VA +  +++E  +  P +   L+ +YA    G+
Sbjct: 549 MPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSN--PGNYILLSNIYA--SKGM 604

Query: 579 INEGKKFLEIMR 590
            NE  +  ++M+
Sbjct: 605 WNEVNRVRDMMK 616



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 199/434 (45%), Gaps = 71/434 (16%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           DA  + D V +  VF+++ ++ A+    +    L T+S+M   G+  D    P  +KACA
Sbjct: 66  DATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACA 125

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
            L  L    ++HG+    G+DS  F+ +SLV MY KC   R A ++FDRM E  DVV W+
Sbjct: 126 GLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEP-DVVSWS 184

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTN------------------------------ 159
           ++++AY+  G   EA  LF EM   G+  N                              
Sbjct: 185 ALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLR 244

Query: 160 -----AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEA 214
                  T  + L A  D     +G+ IH   +K G      V++ALI MY +C   +E 
Sbjct: 245 GFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEM 304

Query: 215 AGVLYQLENKD-----------------------------------SVSWNSMLTGFVQN 239
           + V  Q+++ D                                    VSW SM+    QN
Sbjct: 305 SQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQN 364

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A++ FRE+Q AG KP+ V     + A G +  L++GK  H +++++G  +D+ +G
Sbjct: 365 GRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVG 424

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           + L+DMYAKC  +      F  +  ++ + W  +IAGYA +    +A+E+F  +Q  G  
Sbjct: 425 SALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQK 484

Query: 360 ADVMIIGSVLMACS 373
            D++    VL ACS
Sbjct: 485 PDIISFTCVLSACS 498



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 150/312 (48%), Gaps = 41/312 (13%)

Query: 2   YGKCGSVLDAEQLF----DKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
           Y + G V +A++LF    D   Q  + +WN M+  +  +G     +  +  M + G   D
Sbjct: 190 YARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPD 249

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             T   V+ A   L+DL  G  IHG V+K G  S   + ++L+ MY KC    +  Q+FD
Sbjct: 250 GTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFD 309

Query: 118 RM----------------------------------GEKEDVVLWNSIISAYSASGQCLE 143
           +M                                  G + +VV W S+I+  S +G+ +E
Sbjct: 310 QMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIE 369

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
           AL LFREMQ  G+  N+ T    L AC + +    G   H  +++ G +  VYV +ALI 
Sbjct: 370 ALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALID 429

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV- 262
           MYA+CG++  +      +  K+ V WN+++ G+  +    +AM+ F  +Q +GQKPD + 
Sbjct: 430 MYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIIS 489

Query: 263 --CTVNAVSASG 272
             C ++A S SG
Sbjct: 490 FTCVLSACSQSG 501



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 116/225 (51%), Gaps = 3/225 (1%)

Query: 12  EQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML 71
            QL D+  +  V +W +M+     NG  +  LE +  M++ G+  ++ T PC++ AC  +
Sbjct: 340 RQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNI 399

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
             L  G   H   L+ G  +  ++ ++L+ MYAKC   + +R  FD +  K ++V WN++
Sbjct: 400 AALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAV 458

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG-MEIHAATVKSG 190
           I+ Y+  G+  EA+ +F  MQR G   +  +F   L AC  S     G    ++ + K G
Sbjct: 459 IAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYG 518

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
              +V     ++ + +R GK+ +A  ++ ++  N D+  W ++L+
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  +   FD +  + +  WNA++  Y  +G+    +E +  M+  G   D  +
Sbjct: 430 MYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIIS 489

Query: 61  FPCVIKACAMLKDLDCGA-KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F CV+ AC+     + G+   + +  K G ++       +V + ++     +A  +  RM
Sbjct: 490 FTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRM 549

Query: 120 GEKEDVVLWNSIISA 134
               D  +W +++S+
Sbjct: 550 PVNPDACVWGALLSS 564


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 258/742 (34%), Positives = 410/742 (55%), Gaps = 39/742 (5%)

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            N +++ Y K  +  +AR+LFD M E+   V W  +I  YS   Q  EA  LF +MQR G
Sbjct: 81  TNMMISGYVKSGNLGEARKLFDGMVERT-AVTWTILIGGYSQLNQFKEAFELFVQMQRCG 139

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
              +  TFV  L  C          ++    +K G + ++ V N L+  Y +  ++    
Sbjct: 140 TEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRL---- 195

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
                                   DL C   Q F+E+     + D       + A+  L 
Sbjct: 196 ------------------------DLAC---QLFKEMP----EIDSFTFAAVLCANIGLD 224

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +++ G+++H++ IK  FV ++ + N L+D Y+K   V    ++F +M  QD +S+  II+
Sbjct: 225 DIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIIS 284

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY-IIRKGLS 394
           GYA +  H  A +LFR +Q    D       ++L   S        ++IH   I+    S
Sbjct: 285 GYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADS 344

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           ++++ N++VD+Y KCG  + +  +F ++  +  V WT+MIS+YV  G   E L+LF  M 
Sbjct: 345 EILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR 404

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
           +A+V +D  T  S L A++S++ L  GK+L+ FII+ GF       S+L+D+YA+CG++ 
Sbjct: 405 QASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIK 464

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A + F  +  ++++ W +MI+A   +G  +  +  F +M      PD ++FL +L ACS
Sbjct: 465 DAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACS 524

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           HSGL+ EG      M   Y+LDP  EHYA +VD+L R+    EA + +  M I+P   +W
Sbjct: 525 HSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMW 584

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDP-GNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
            ++L ACR+H N+EL    A +L  ++   +   YV +SN++AA+ +W++V +V   MR 
Sbjct: 585 SSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRD 644

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            G+KK P  SW+EI ++ H F A D+ H + +EI KK+  +T+ +E E GY   T   LH
Sbjct: 645 RGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTME-ELGYKPDTSCALH 703

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           N +E+ KV+ L  HSERLAIA+ ++ + EGS I + KNLR C+DCH+  K++S++ GRE+
Sbjct: 704 NEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREI 763

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
            VRD+ RFHHF  G CSCGD+W
Sbjct: 764 TVRDSTRFHHFRDGFCSCGDFW 785



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 236/475 (49%), Gaps = 41/475 (8%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D+FTF  V+ A   L D+  G +IH  V+K  +    F+ N+L+  Y+K      AR+L
Sbjct: 208 IDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKL 267

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M E +D V +N IIS Y+  G+   A  LFRE+Q        + F   L    ++  
Sbjct: 268 FDEMPE-QDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLD 326

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             +G +IHA T+ +  + ++ V N+L+ MYA+CGK  EA  +   L ++ +V W +M++ 
Sbjct: 327 WEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISA 386

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +VQ   Y + +Q F +++ A    DQ    + + AS  + +L  GK+LH++ IK GF+S+
Sbjct: 387 YVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSN 446

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           +  G+ L+D+YAKC  +    + F +M  ++ +SW  +I+ YAQN      L+ F+ + L
Sbjct: 447 VFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVL 506

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYS 415
            GL  D +    VL ACS           H  ++ +GL      N++  +Y     +D  
Sbjct: 507 SGLQPDSVSFLGVLSACS-----------HSGLVEEGLWH---FNSMTQIY----KLDPR 548

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           R  + S+           +     +G  NEA +   LM E  ++ D I   S L+A    
Sbjct: 549 REHYASV-----------VDMLCRSGRFNEAEK---LMAEMPIDPDEIMWSSVLNACR-- 592

Query: 476 SILKKGKELNGFIIRKGFNLE----GSVASSLVDMYARCGALDIANKVFNCVQTK 526
             + K +EL      + FN+E     +   ++ ++YA  G  +  +KV   ++ +
Sbjct: 593 --IHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDR 645



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 180/354 (50%), Gaps = 11/354 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K  SV+DA +LFD++ ++   ++N ++  Y  +G+     + +  ++        F F
Sbjct: 255 YSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPF 314

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++   +   D + G +IH   +    DS   + NSLV MYAKC  F +A  +F  +  
Sbjct: 315 ATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTH 374

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           +   V W ++ISAY   G   E L LF +M++  ++ +  TF + L+A    +  +LG +
Sbjct: 375 RS-AVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 433

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H+  +KSG    V+  +AL+ +YA+CG + +A     ++ +++ VSWN+M++ + QN  
Sbjct: 434 LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGE 493

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN- 300
               ++ F+E+  +G +PD V  +  +SA    G L+     H  ++ Q +  D +  + 
Sbjct: 494 AEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG-LVEEGLWHFNSMTQIYKLDPRREHY 552

Query: 301 -TLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHL-KALELFR 351
            +++DM  +    N   ++  +M    D I W++++     N C + K  EL R
Sbjct: 553 ASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL-----NACRIHKNQELAR 601



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 126/237 (53%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG   +AE +F  ++ R+   W AM+ AYV  G     L+ +++MR   +  D  T
Sbjct: 355 MYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQAT 414

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +++A A +  L  G ++H  ++K G+ S  F  ++L+ +YAKC   + A Q F  M 
Sbjct: 415 FASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP 474

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ ++V WN++ISAY+ +G+    L  F+EM   GL  ++ +F+  L AC  S     G+
Sbjct: 475 DR-NIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGL 533

Query: 181 -EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
              ++ T     + +     +++ M  R G+  EA  ++ ++  + D + W+S+L  
Sbjct: 534 WHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 590



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/440 (22%), Positives = 188/440 (42%), Gaps = 77/440 (17%)

Query: 273 RLGNLLNGKEL-HAYAIKQGFVSDLQIG-NTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
           R+GN L   EL  A  + +       +  N ++  Y K   +    ++F  M  +  ++W
Sbjct: 53  RVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTW 112

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
           T +I GY+Q N   +A ELF  +Q  G + D +   ++L  C+G +  +Q  ++   II+
Sbjct: 113 TILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIK 172

Query: 391 KGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI--------------- 434
            G  S L++ N +VD Y K   +D +  +F+ +   D  ++ +++               
Sbjct: 173 LGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQI 232

Query: 435 ------SSYVHNGLANEALELFYLMNEANV----------ESDSIT-------------- 464
                 +++V N   + AL  FY  +++ +          E D ++              
Sbjct: 233 HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKH 292

Query: 465 ---------------------LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
                                  + LS AS+    + G++++   I    + E  V +SL
Sbjct: 293 KYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSL 352

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           VDMYA+CG  + A  +F  +  +  + WT+MI+A    G  +  + LF KM   S   D 
Sbjct: 353 VDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQ 412

Query: 564 ITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV 622
            TF +LL A +    ++ GK+    I++  +  + +    + L+D+  +   +++A Q  
Sbjct: 413 ATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG--SALLDVYAKCGSIKDAVQTF 470

Query: 623 RSMQIEPTAEV--WCALLGA 640
           + M   P   +  W A++ A
Sbjct: 471 QEM---PDRNIVSWNAMISA 487


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 226/561 (40%), Positives = 361/561 (64%), Gaps = 2/561 (0%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           N+   K++HA     G + DL + N L+ M AK   +     +F +M  +D +SW+ +I 
Sbjct: 15  NIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIG 74

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
           G+ +N  + +  + FR +   G   D   +  V+ AC     +   + IH  +++ GL  
Sbjct: 75  GFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHL 134

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           D  + + +VD+Y KCG ID ++ +F+ +  KD+V+ T MI+ Y   G  NE+  LF  M 
Sbjct: 135 DNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMR 194

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
                 D + +V+ ++A + L  + K + ++ ++  + ++L+  + ++++DMYA+CG++D
Sbjct: 195 RDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSID 254

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            + ++F+ ++ K++I W++MI A G HG+G+ A++LF+ M      P+ ITF++LLYACS
Sbjct: 255 SSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACS 314

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           H+GL+++G +   +M   Y + P  +HY C+VDLLGRA  L++A + + +M++E    +W
Sbjct: 315 HAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIW 374

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
           CA LGACR+H   +L E  AK LL L   NPG+Y+L+SN++A + +WKDV ++R  M   
Sbjct: 375 CAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKR 434

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
            LKK PG +WIE+ N I+ F A D SH  S+EIY+ L  +++KLE   GYV  T  VLH+
Sbjct: 435 RLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLE-SAGYVPDTNSVLHD 493

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           V+EE K+ +L+ HSE+LAIA+G++ + +G+ IRITKNLRVC DCHSFCKLVS +  R+++
Sbjct: 494 VDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDII 553

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           VRDANRFHHF+ G+CSCGDYW
Sbjct: 554 VRDANRFHHFKEGICSCGDYW 574



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 193/390 (49%), Gaps = 17/390 (4%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H  V   G      + N L+ M AK  D   A  LF++M E+ D V W+ +I  +  +
Sbjct: 21  QVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKM-EERDPVSWSVMIGGFVKN 79

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G        FRE+ R G   + ++    ++AC D+    +G  IH+  +K+G +L  +V 
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           + L+ MYA+CG +  A  +  ++  KD V+   M+ G+ +     ++   F +++  G  
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFV 199

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           PD+V  V  V+A  +LG +   + +H Y   + +  D+++G  ++DMYAKC  ++    +
Sbjct: 200 PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREI 259

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS----- 373
           F +M  ++ ISW+ +I  Y  +    +ALELF  +   G+  + +   S+L ACS     
Sbjct: 260 FDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLV 319

Query: 374 --GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSW 430
             GL+  S     +G  +R    D+     +VD+ G+ G +D +  + E++E  KD   W
Sbjct: 320 DDGLQLFSLMSVSYG--VR---PDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIW 374

Query: 431 TSMISS-YVHN--GLANEALELFYLMNEAN 457
            + + +  +H    LA +A +L   +   N
Sbjct: 375 CAFLGACRIHRQVDLAEKAAKLLLSLQTQN 404



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 159/309 (51%), Gaps = 2/309 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M  K   ++ A  LF+K+ +R   +W+ M+G +V NG+  R  +T+  +   G   D F+
Sbjct: 44  MCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFS 103

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            P VIKAC     L  G  IH  VLK G    +F+ ++LV MYAKC     A+QLFDRM 
Sbjct: 104 LPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRM- 162

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K+D+V    +I+ Y+  G+  E+  LF +M+R G V +    V  + AC          
Sbjct: 163 PKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKAR 222

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H        +L V +  A+I MYA+CG +  +  +  ++E K+ +SW++M+  +  + 
Sbjct: 223 LVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHG 282

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY-AIKQGFVSDLQIG 299
              +A++ F  +  +G  P+++  ++ + A    G + +G +L +  ++  G   D++  
Sbjct: 283 QGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHY 342

Query: 300 NTLMDMYAK 308
             ++D+  +
Sbjct: 343 TCMVDLLGR 351



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 31/283 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+  + ++FD++ Q+ V +W+AM+GAY  +G+    LE +  M   GI  +  T
Sbjct: 246 MYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRIT 305

Query: 61  FPCVIKACAMLKDLDCGAKIHGLV-LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC+    +D G ++  L+ +  G          +V +  +     +A +L + M
Sbjct: 306 FISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENM 365

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             ++D  +W +              LG  R  ++V L   A   + +LQ  ++     L 
Sbjct: 366 EVEKDEGIWCAF-------------LGACRIHRQVDLAEKAAKLLLSLQT-QNPGHYILL 411

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMT-----EAAGVLYQLENKDSVSWNSMLT 234
             I+A    +G+   V     L+A   R  K+      E   ++Y+    D+    S   
Sbjct: 412 SNIYA---NAGRWKDVAKIRNLMAK-RRLKKIPGYTWIEVDNIIYRFGAGDNSHLRS--- 464

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
               N++Y       ++L+ AG  PD    ++ V    +LG L
Sbjct: 465 ----NEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGIL 503


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 273/843 (32%), Positives = 477/843 (56%), Gaps = 13/843 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CGS++DA+  FD++  +   TW  ++ A+   G+  + L  +  M++ G++     
Sbjct: 42  MYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRN 101

Query: 61  FPCVIKACAMLKDL-DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC+   +L + G +IHG++     +S  ++  +L+ MY KC     AR++FD +
Sbjct: 102 FVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGI 161

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K  VV WN++I+AY+      +A+ +F  M   G+     TF+  L AC  S  + L 
Sbjct: 162 RHKR-VVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDAC--SKLKDLE 218

Query: 180 M-EIHAATVKSGQNLQVY---VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           + ++    V+  ++  ++    A AL+  Y  CG + E A   +     + +   +M+T 
Sbjct: 219 VAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDL-EQAFRAFSRHRLELILATAMITQ 277

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           + Q + + +A++ F+ +   G K D++  +  ++A      L  G+ +H +  +  F   
Sbjct: 278 YTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRH 337

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           +  GN L++MY KC  +     VF  M  +D ISW TIIA + Q++ H +AL L   +QL
Sbjct: 338 VNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQL 397

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
           +G+ AD +   + L  C+  + +++ + IH +I+  G+ +D+++ NAI+D+YG C + D 
Sbjct: 398 DGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDD 457

Query: 415 SRNVFESIESKDVVSWTSMISSYV-HNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           +  VF +++ +D VSW +MI++Y     L++EAL LF  M       D I+ V+ALSA +
Sbjct: 458 ASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACA 517

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           + + L +GK L+  I   G     +VA+++++MYA+ G L +A K+F  +   D+I W  
Sbjct: 518 AQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNG 577

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           MI+A   HG     +  F +M  E   P+ +TF++++ ACSH GL+ +G +    +  D+
Sbjct: 578 MISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDF 637

Query: 594 Q-LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
             + P  EHY C+VDL+ RA  L+ A +F+ +  ++P   +   +LGA +VH + E    
Sbjct: 638 PTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARK 697

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
            A+ L+EL P     YV++SN++    K  +  ++R  M    ++K P  S I +  ++H
Sbjct: 698 SAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVH 757

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLA 772
            F   D +++ + EI ++L  ++ ++ +  GY   T  +LH+V +E+K ++L  HSE+LA
Sbjct: 758 EFFTGDTTNARTPEILEELERLSLEMAK-AGYTPDTTLMLHDVGDEQKKRLLSYHSEKLA 816

Query: 773 IAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           IA+G++ +  G+ +RI KNLRVC DCH+  K +S++ GRE+VVRD++RFHHF+ G CSCG
Sbjct: 817 IAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCG 876

Query: 833 DYW 835
           DYW
Sbjct: 877 DYW 879



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 240/485 (49%), Gaps = 21/485 (4%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L    DS    LG E+HA   KS  +   ++ + L+ MY  CG + +A     ++  +D+
Sbjct: 5   LDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDA 64

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP---DQVCTVNAVSASGRLGNLLNGKEL 283
           ++W  ++    Q     +A+  FR +Q  G  P   + V  + A SA   L  L  G+ +
Sbjct: 65  LTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPEL--LEEGRRI 122

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           H         SD  +  TL+ MY KC  V    +VF  +  +  + W  +I  YAQ + H
Sbjct: 123 HGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHH 182

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK---GLSDLVILN 400
            +A+++F  + LEG+ A+ +    VL ACS LK +   K +   +  +    L D     
Sbjct: 183 EQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFAT 242

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A+V+ YG CG+++ +   F S    +++  T+MI+ Y      +EALELF +M    V+ 
Sbjct: 243 ALVNFYGSCGDLEQAFRAF-SRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKL 301

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D I  ++ L+A S    L++G+ ++GF+    F+   +  ++L++MY +CG+L+ A +VF
Sbjct: 302 DRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVF 361

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
             +Q +D+I W ++I A+G H +   A+ L + M+ +    D I+F+  L  C+ S  + 
Sbjct: 362 RSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALA 421

Query: 581 EGKKFLEI-----MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           +G+          ++ D  LD        ++D+ G     ++A +  R+M++      W 
Sbjct: 422 KGRMIHSWIVESGIKADVMLD------NAILDMYGSCKSTDDASRVFRAMKVRDQVS-WN 474

Query: 636 ALLGA 640
           A++ A
Sbjct: 475 AMITA 479



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 183/371 (49%), Gaps = 7/371 (1%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GKE+HA   K        +G+ L+ MY  C  +      F +M  QD ++W  +I  + Q
Sbjct: 17  GKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQ 76

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG-LKCMSQTKEIHGYIIRKGL-SDLV 397
                +AL LFR++QLEG+        +VL ACS   + + + + IHG +    + SD  
Sbjct: 77  IGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHY 136

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           +   ++ +YGKC +++ +R VF+ I  K VV W +MI++Y       +A+++FY M    
Sbjct: 137 VSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEG 196

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN--LEGSVASSLVDMYARCGALDI 515
           V+++ IT +  L A S L  L+  K +   +  +  +   + S A++LV+ Y  CG L+ 
Sbjct: 197 VKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQ 256

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A + F+     +LIL T+MI       R   A++LF  M  E    D I  +A+L ACS 
Sbjct: 257 AFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSG 315

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
              + EG+     MR + + D        L+++ G+   LEEA +  RSMQ       W 
Sbjct: 316 PRGLEEGRIIHGFMR-EIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVIS-WN 373

Query: 636 ALLGACRVHSN 646
            ++ A   HS 
Sbjct: 374 TIIAAHGQHSQ 384



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 11/216 (5%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L  GKE++  I +   +    +   LV MY  CG+L  A   F+ +  +D + W  +I A
Sbjct: 14  LDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRA 73

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS-HSGLINEGKKFLEIMRCDYQLD 596
           +G  G  + A+ LF  M+ E  AP +  F+A+L ACS    L+ EG++   ++R      
Sbjct: 74  HGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAM-- 131

Query: 597 PWPEHY--ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG-EIV 653
              +HY    L+ + G+ + +E+A +    ++ +   E W A++ A     + E   ++ 
Sbjct: 132 -ESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVE-WNAMITAYAQQDHHEQAIQVF 189

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
              LLE   G     +    V  A  K KD+E  ++
Sbjct: 190 YAMLLE---GVKAERITFIGVLDACSKLKDLEVAKL 222


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/692 (38%), Positives = 390/692 (56%), Gaps = 38/692 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALI--AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IHA  +++G     + A+ LI  A  +    +  A  V  Q+ + +  +WN+++  +  
Sbjct: 53  QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYAS 112

Query: 239 N-DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           + + +   + F R L  +   PD+      + A+  L  L  GK  H   IK    SD+ 
Sbjct: 113 SSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVF 172

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           I N+L+  YAKC  +    RVF  +  +D +SW ++I  + Q  C  +ALELF+ ++ + 
Sbjct: 173 ILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQN 232

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSR 416
           +  + + +  VL AC+        + +H YI R  + + L + NA++D+Y KCG+++ ++
Sbjct: 233 VKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAK 292

Query: 417 NVFESIESKDVVSWTSM-------------------------------ISSYVHNGLANE 445
            +F+ +  KD+VSWT+M                               IS+Y   G   E
Sbjct: 293 RLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKE 352

Query: 446 ALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           ALELF+ L      + D +TLVS LSA + L  +  G  ++ +I ++G  L   + +SL+
Sbjct: 353 ALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLI 412

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMY +CG L  A  VF+ V+ KD+ +W++MI    +HG GK AI LF KM+ +   P+ +
Sbjct: 413 DMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAV 472

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF  +L ACSH GL+ EG+ F   M   Y + P  +HYAC+VD+LGRA  LEEA + +  
Sbjct: 473 TFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEK 532

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M + P A VW ALLGAC +H N  L E    +L+EL+PGN G YVL+SN++A + KW  V
Sbjct: 533 MPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRV 592

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
             +R  MR  GLKK PG S IE+   +H F+  D SH  + +IY KL EI  +LE   GY
Sbjct: 593 SGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETI-GY 651

Query: 745 VAQTQFVLHNVEEEE-KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
           V     +L  VEEE+ K Q L+ HSE+LAIA+G++ + +   IRI KNLRVC DCHS  K
Sbjct: 652 VPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAK 711

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           LVS+L+ RE+++RD  RFHHF  G CSC DYW
Sbjct: 712 LVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 227/462 (49%), Gaps = 37/462 (8%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFTFPCVIKACA 69
           A+Q+FD++    ++TWN ++ AY S+  P + L  + RM        D FTFP +IKA +
Sbjct: 88  AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
            L++L  G   HG+V+K    S  FI+NSL+  YAKC +     ++F  +  + DVV WN
Sbjct: 148 ELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNI-PRRDVVSWN 206

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           S+I+A+   G   EAL LF+EM+   +  N  T V  L AC   S    G  +H+   ++
Sbjct: 207 SMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERN 266

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY------- 242
                + ++NA++ MY +CG + +A  +  ++  KD VSW +ML G+ +   Y       
Sbjct: 267 RIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIF 326

Query: 243 --------------------C----KAMQFFRELQ-GAGQKPDQVCTVNAVSASGRLGNL 277
                               C    +A++ F ELQ     KPD+V  V+ +SA  +LG +
Sbjct: 327 DAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAM 386

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G  +H Y  KQG   +  +  +L+DMY KC  +     VF+ +  +D   W+ +IAG 
Sbjct: 387 DLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGL 446

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY--IIRKGLSD 395
           A +     A+ LF  +Q + +  + +   ++L ACS +  + + +       ++   L  
Sbjct: 447 AMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPG 506

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
           +     +VD+ G+ G ++ +  + E +      S W +++ +
Sbjct: 507 VKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGA 548



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 250/516 (48%), Gaps = 42/516 (8%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV--AMYAKCYDFRKARQLFDRMGE 121
           +I  C+  K L    +IH  +L+ G     F  + L+  A  +       A+Q+FD++  
Sbjct: 41  LIDQCSETKQLK---QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPH 97

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLF-REMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             ++  WN++I AY++S    ++L +F R + +     + +TF   ++A  +      G 
Sbjct: 98  P-NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             H   +K      V++ N+LI  YA+CG++     V   +  +D VSWNSM+T FVQ  
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGG 216

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ F+E++    KP+ +  V  +SA  +  +   G+ +H+Y  +      L + N
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSN 276

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ--------------------- 339
            ++DMY KC  V    R+F +M  +D +SWTT++ GYA+                     
Sbjct: 277 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAA 336

Query: 340 --------NNC--HLKALELFRTVQL-EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
                     C    +ALELF  +QL +    D + + S L AC+ L  M     IH YI
Sbjct: 337 WNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYI 396

Query: 389 IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
            ++G+  +  +  +++D+Y KCG++  +  VF S+E KDV  W++MI+    +G   +A+
Sbjct: 397 KKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAI 456

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDM 506
            LF  M E  V+ +++T  + L A S + ++++G+   N   +  G        + +VD+
Sbjct: 457 ALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDI 516

Query: 507 YARCGALDIANKVFNCVQTKDLI-LWTSMINANGLH 541
             R G L+ A ++   +       +W +++ A  +H
Sbjct: 517 LGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIH 552



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 217/451 (48%), Gaps = 54/451 (11%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYA--KCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           K++HA  ++ G   D    + L+   A      ++Y  +VF Q+   +  +W T+I  YA
Sbjct: 52  KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111

Query: 339 QN-NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
            + N H   L   R +       D      ++ A S L+ +   K  HG +I+  L SD+
Sbjct: 112 SSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDV 171

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            ILN+++  Y KCG +     VF +I  +DVVSW SMI+++V  G   EALELF  M   
Sbjct: 172 FILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQ 231

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           NV+ + IT+V  LSA +  S  + G+ ++ +I R       +++++++DMY +CG+++ A
Sbjct: 232 NVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDA 291

Query: 517 NKVFNCVQTKDLILWTSMI----------NANGLH---------------------GRGK 545
            ++F+ +  KD++ WT+M+           A G+                      G+ K
Sbjct: 292 KRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPK 351

Query: 546 VAIDLFYKME-AESFAPDHITFLALLYACSHSGLINEG-------KKFLEIMRCDYQLDP 597
            A++LF++++ +++  PD +T ++ L AC+  G ++ G       KK  + M+ +  L  
Sbjct: 352 EALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKK--QGMKLNCHLT- 408

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
                  L+D+  +   L++A     S++      VW A++    +H + +    +  K+
Sbjct: 409 -----TSLIDMYCKCGDLQKALMVFHSVE-RKDVFVWSAMIAGLAMHGHGKDAIALFSKM 462

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
            E D   P N V  +N+  A      VE+ R
Sbjct: 463 QE-DKVKP-NAVTFTNILCACSHVGLVEEGR 491



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 141/311 (45%), Gaps = 31/311 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG +    ++F  + +R V +WN+M+ A+V  G P   LE +  M    +  +  T 
Sbjct: 181 YAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITM 240

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA   D + G  +H  + +     +  + N+++ MY KC     A++LFD+M E
Sbjct: 241 VGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPE 300

Query: 122 K------------------------------EDVVLWNSIISAYSASGQCLEALGLFREM 151
           K                              +D+  WN++ISAY   G+  EAL LF E+
Sbjct: 301 KDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHEL 360

Query: 152 QRVGLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           Q       +  T V+ L AC       LG  IH    K G  L  ++  +LI MY +CG 
Sbjct: 361 QLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGD 420

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           + +A  V + +E KD   W++M+ G   +     A+  F ++Q    KP+ V   N + A
Sbjct: 421 LQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCA 480

Query: 271 SGRLGNLLNGK 281
              +G +  G+
Sbjct: 481 CSHVGLVEEGR 491



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 33/202 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFT-------------------------------WNAM 29
           MY KCGSV DA++LFDK+ ++ + +                               WNA+
Sbjct: 281 MYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNAL 340

Query: 30  LGAYVSNGEPLRVLETYSRMRVLGIS-VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
           + AY   G+P   LE +  +++   +  D  T    + ACA L  +D G  IH  + K G
Sbjct: 341 ISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQG 400

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
                 +  SL+ MY KC D +KA  +F  + E++DV +W+++I+  +  G   +A+ LF
Sbjct: 401 MKLNCHLTTSLIDMYCKCGDLQKALMVFHSV-ERKDVFVWSAMIAGLAMHGHGKDAIALF 459

Query: 149 REMQRVGLVTNAYTFVAALQAC 170
            +MQ   +  NA TF   L AC
Sbjct: 460 SKMQEDKVKPNAVTFTNILCAC 481



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A  +F  V ++ VF W+AM+     +G     +  +S+M+   +  +A T
Sbjct: 414 MYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVT 473

Query: 61  FPCVIKACA 69
           F  ++ AC+
Sbjct: 474 FTNILCACS 482


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/638 (39%), Positives = 377/638 (59%), Gaps = 40/638 (6%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           L+  YA CG+      V  ++ +++ V +N M+  +V N  Y   +  FRE+   G +PD
Sbjct: 59  LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118

Query: 261 Q---VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
                C + A S S    NL  G  +H   +K G   +L +GN L+ MY KC C+    R
Sbjct: 119 NYTYPCVLKACSCSE---NLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARR 175

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF +M  +D +SW +++AGYA N     ALE+ R ++  G   D   + S++ A +    
Sbjct: 176 VFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVAN--- 232

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
                                            N+ Y   +F ++E K+++SW  MI  Y
Sbjct: 233 -----------------------------TSSENVLYVEKIFVNLERKNLISWNVMIRVY 263

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           + N L  +A++L+  M +  VE D+IT  S L A   LS L  G+ ++ ++ +K      
Sbjct: 264 MKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNL 323

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            + +SL+DMYARCG LD A +VF+ ++ +D+  WTS+I+A G+ G+G  A+ LF +M   
Sbjct: 324 LLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNS 383

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
             APD I F+A+L ACSHSGL++EG+ + + M  DY++ P  EHYACLVDLLGRA  ++E
Sbjct: 384 GQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDE 443

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           AY  ++ M IEP   VW  LL +CRV +N ++G + A  LL+L P   G YVL+SN++A 
Sbjct: 444 AYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAK 503

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           + +WK+V ++R  M+   ++KTPG S +E+ N++H+F+A D SH +S EIY++L  +  K
Sbjct: 504 AGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAK 563

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVD 797
           + +E GYV +T   LH+VEEE+K   L  HSE+LAI + +L + E   IRITKNLRVC D
Sbjct: 564 M-KELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQEYQ-IRITKNLRVCGD 621

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CH   KL+S++  RE++VRD NRFHHF+ GVCSCGDYW
Sbjct: 622 CHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 233/464 (50%), Gaps = 38/464 (8%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +F  + KA     D+    K+H ++          +   L+  YA C +    R++FD M
Sbjct: 20  SFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEM 79

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            ++ +VV +N +I +Y  + +  + L +FREM   G   + YT+   L+AC  S     G
Sbjct: 80  SDR-NVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYG 138

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           + IH   +K G +  ++V N LIAMY +CG + EA  V  ++  KD VSWNSM+ G+  N
Sbjct: 139 LLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHN 198

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             +  A++  RE++  GQKPD  CT+ ++  +                     V++    
Sbjct: 199 MRFDDALEICREMEDYGQKPDG-CTMASLMPA---------------------VANTSSE 236

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L           Y+ ++F  +  ++ ISW  +I  Y +N+   +A++L+  ++   ++
Sbjct: 237 NVL-----------YVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVE 285

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D +   SVL AC  L  +   + IH Y+ +K L  +L++ N+++D+Y +CG +D ++ V
Sbjct: 286 PDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRV 345

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ ++ +DV SWTS+IS+Y   G    A+ LF  M  +    DSI  V+ LSA S   +L
Sbjct: 346 FDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLL 405

Query: 479 KKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVF 520
            +G+ +    +   + +   +   + LVD+  R G +D A  + 
Sbjct: 406 DEGR-IYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNII 448



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 221/444 (49%), Gaps = 49/444 (11%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG      ++FD++S R V  +N M+ +YV+N      L  +  M   G   D +T+
Sbjct: 63  YAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTY 122

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           PCV+KAC+  ++L  G  IHG VLK G D   F+ N L+AMY KC    +AR++FD M  
Sbjct: 123 PCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIW 182

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DVV WNS+++ Y+ + +  +AL + REM+  G   +  T  + + A  ++S E +   
Sbjct: 183 K-DVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENV--- 238

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
                        +YV    +                  LE K+ +SWN M+  +++N L
Sbjct: 239 -------------LYVEKIFV-----------------NLERKNLISWNVMIRVYMKNSL 268

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  + +++    +PD +   + + A G L  LL G+ +H Y  K+    +L + N+
Sbjct: 269 PTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENS 328

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYA+C C++   RVF +M  +D  SWT++I+ Y        A+ LF  +   G   D
Sbjct: 329 LIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPD 388

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------IVDVYGKCGNIDY 414
            +   ++L ACS    + +     G I  K ++D   +         +VD+ G+ G +D 
Sbjct: 389 SIAFVAILSACSHSGLLDE-----GRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDE 443

Query: 415 SRNVFE--SIESKDVVSWTSMISS 436
           + N+ +   IE  + V W +++SS
Sbjct: 444 AYNIIKQMPIEPNERV-WATLLSS 466



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 144/317 (45%), Gaps = 42/317 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + +A ++FD++  + V +WN+M+  Y  N      LE    M   G   D  T
Sbjct: 163 MYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCT 222

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A A                           +S   +Y +        ++F  + 
Sbjct: 223 MASLMPAVAN-------------------------TSSENVLYVE--------KIFVNL- 248

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+++++ WN +I  Y  +    +A+ L+ +M++  +  +A TF + L AC D S   LG 
Sbjct: 249 ERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGR 308

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH    K      + + N+LI MYARCG + +A  V  +++ +D  SW S+++ +    
Sbjct: 309 RIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTG 368

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             C A+  F E+  +GQ PD +  V  +SA    G L  G+       KQ    D +I  
Sbjct: 369 QGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGR----IYFKQ-MTDDYRI-T 422

Query: 301 TLMDMYAKCCCVNYMGR 317
             ++ YA  C V+ +GR
Sbjct: 423 PRIEHYA--CLVDLLGR 437



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 69/136 (50%), Gaps = 3/136 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG + DA+++FD++  R V +W +++ AY   G+    +  ++ M   G + D+  
Sbjct: 332 MYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIA 391

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN--SLVAMYAKCYDFRKARQLFDR 118
           F  ++ AC+    LD G +I+   +   Y  T  I +   LV +  +     +A  +  +
Sbjct: 392 FVAILSACSHSGLLDEG-RIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQ 450

Query: 119 MGEKEDVVLWNSIISA 134
           M  + +  +W +++S+
Sbjct: 451 MPIEPNERVWATLLSS 466



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
           L  AL     +  LKK   L+  I     +   S+   L+  YA CG   +  KVF+ + 
Sbjct: 24  LAKALDQNPDIKTLKK---LHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMS 80

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            ++++ +  MI +   + R    + +F +M    F PD+ T+  +L ACS S
Sbjct: 81  DRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCS 132


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/659 (37%), Positives = 393/659 (59%), Gaps = 4/659 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           + HA  +++        ++ LI+  A    G +  A  +  Q++N D    N+M+ G+ +
Sbjct: 29  QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYAR 88

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +    +A+  +  +   G   D       ++A  RLG +  G+  H   +K GF SDL +
Sbjct: 89  SQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFV 148

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEG 357
            N L+  Y  C        VF + T +D ++W  +I  +       KA +L     +L+ 
Sbjct: 149 INALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN 208

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSR 416
           L  D + + S++ AC+ L  + + K +H Y    GL + L + NAI+D+Y KC +I+ ++
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQ 268

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF  I  KDV+SWTSM+S    +G   EAL LF  M    +E D ITLV  LSA +   
Sbjct: 269 EVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTG 328

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L +GK ++  I +   N +  + ++LVDMYA+CG++D+A +VF  ++ +++  W ++I 
Sbjct: 329 ALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIG 388

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
              +HG G+ AI LF +ME +   PD +TF+ALL ACSH+GL++EG    + M+  +Q++
Sbjct: 389 GLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIE 448

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHY C+VDLL RA  +++A  F+ +M I+  + +W  LLGACR   + +L E + ++
Sbjct: 449 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRR 508

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           ++EL+P + G YV++SN++A   +W    ++R +M+  G++KTPG SWIE+   IH F+A
Sbjct: 509 VIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVA 568

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D+SH ++++IY  + E+T ++  +GG+V  T  VL ++EEEEK   L+ HSE+LAIA G
Sbjct: 569 GDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALG 628

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ +  GS IRI KNLRVC DCHSF K+ S+++ RE+V RD +RFHHF+ G CSC D+W
Sbjct: 629 LISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 184/364 (50%), Gaps = 2/364 (0%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A +LF ++     F  N M+  Y  +  P   +  Y  M   G+ VD +T+P V+ ACA 
Sbjct: 64  ARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACAR 123

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L  +  G + H  VLK G+ S  F++N+L+  Y  C  F  A  +FD    + DVV WN 
Sbjct: 124 LGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVR-DVVTWNI 182

Query: 131 IISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           +I+A+   G   +A  L  EM ++  L  +  T V+ + AC        G  +H+ + + 
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKEL 242

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G +  + V NA++ MY +C  +  A  V  ++  KD +SW SML+G  ++  + +A+  F
Sbjct: 243 GLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALF 302

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           +++Q    + D++  V  +SA  + G L  GK +H    K     DL +   L+DMYAKC
Sbjct: 303 QKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKC 362

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             ++   +VF +M  ++  +W  +I G A +     A+ LF  ++ + L  D +   ++L
Sbjct: 363 GSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALL 422

Query: 370 MACS 373
            ACS
Sbjct: 423 CACS 426



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 157/335 (46%), Gaps = 10/335 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAFT 60
           Y  CGS   A  +FD+ + R V TWN M+ A+++ G   +  +    M  L  +  D  T
Sbjct: 156 YHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVT 215

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA L +L+ G  +H    + G D    + N+++ MY KC D   A+++F+R+ 
Sbjct: 216 MVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIR 275

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK DV+ W S++S  + SG   EAL LF++MQ   +  +  T V  L AC  +     G 
Sbjct: 276 EK-DVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGK 334

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH    K   N  + +  AL+ MYA+CG +  A  V  ++  ++  +WN+++ G   + 
Sbjct: 335 YIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHG 394

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+  F +++     PD V  +  + A    G +  G      A+ Q   +  QI  
Sbjct: 395 HGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG-----LAMFQAMKNKFQI-E 448

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
             M+ Y   C V+ + R      A  FI    I A
Sbjct: 449 PRMEHYG--CVVDLLCRARKVDDALAFIENMPIKA 481



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  A+++F+++ ++ V +W +ML     +G     L  + +M++  I +D  T
Sbjct: 257 MYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEIT 316

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA    LD G  IH L+ K   +    +  +LV MYAKC     A Q+F RM 
Sbjct: 317 LVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR 376

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + +V  WN++I   +  G   +A+ LF +M+   L+ +  TF+A L AC  +     G+
Sbjct: 377 VR-NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGL 435

Query: 181 EIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
            +  A     Q   ++     ++ +  R  K+ +A   +  +  K +SV W ++L
Sbjct: 436 AMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLL 490


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/662 (37%), Positives = 386/662 (58%), Gaps = 5/662 (0%)

Query: 178 LGMEIHAATVKSGQN-LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           LG   HA  +K+  N L  ++ N L+ MY++  +   A  +L    N+  V+W +++ G 
Sbjct: 24  LGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGS 83

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           VQN  +  A+  F  ++    +P+      A  ASG L + L GK++HA A+K G +SD+
Sbjct: 84  VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +G +  DMY+K        ++F +M  ++  +W   ++       +  AL  F   + E
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHE 203

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
           G + +++   + L AC+G   +   +++HG++++ G  +D+ + N ++D YGKC  +  S
Sbjct: 204 GWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCS 263

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             +F  I   + VSW SMI SYV N    +A  +F    +  +E     + S LSA + L
Sbjct: 264 EIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGL 323

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           S+L+ GK ++   ++        V S+LVDMY +CG+++ A + F+ +  ++L+ W +MI
Sbjct: 324 SVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMI 383

Query: 536 NANGLHGRGKVAIDLFYKMEAES--FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
                 G+  +A+ LF +M   S   AP+++TF+ +L ACS +G +N G +  E MR  Y
Sbjct: 384 GGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRY 443

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
            ++P  EHYAC+VDLLGRA  +E+AYQF++ M I PT  VW ALLGA ++    ELG++ 
Sbjct: 444 GIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVA 503

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHS 713
           A  L ELDP + GN+VL+SN+FAA+ +W++   VR  M+  G+KK  G SWI  GN +H 
Sbjct: 504 ADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHV 563

Query: 714 FIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAI 773
           F A+D SH  + EI   LA++  ++E   GY+  T F L ++EEEEK   ++ HSE++A+
Sbjct: 564 FQAKDTSHERNSEIQAMLAKLRGEME-AAGYIPDTSFALFDLEEEEKAMEVWYHSEKIAL 622

Query: 774 AYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
           A+G++    G  IRITKNLR+C DCHS  K +S + GRE++VRD N FH F    CSC D
Sbjct: 623 AFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRD 682

Query: 834 YW 835
           YW
Sbjct: 683 YW 684



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 238/471 (50%), Gaps = 9/471 (1%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           FI N LV MY+K  D   + QL   +     VV W ++I+    +G+   AL  F  M+R
Sbjct: 43  FIYNHLVNMYSK-LDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRR 101

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
             +  N +TF  A +A        +G ++HA  VK+GQ   V+V  +   MY++ G   E
Sbjct: 102 DSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEE 161

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +  ++  ++  +WN+ L+  V    Y  A+  F E +  G +P+ +     ++A   
Sbjct: 162 ARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAG 221

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
              L  G++LH + ++ GF +D+ + N L+D Y KC  V     +F  ++  + +SW ++
Sbjct: 222 ASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSM 281

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG- 392
           I  Y QN+   KA  +F   + EG++    ++ SVL AC+GL  +   K +H   ++   
Sbjct: 282 IVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACV 341

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
           + ++ + +A+VD+YGKCG+I+ +   F+ +  +++V+W +MI  Y H G A+ A+ LF  
Sbjct: 342 VGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDE 401

Query: 453 MN--EANVESDSITLVSALSAASSLSILKKGKEL-NGFIIRKGFNLEGSVASSLVDMYAR 509
           M      V  + +T V  LSA S    +  G E+      R G        + +VD+  R
Sbjct: 402 MTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGR 461

Query: 510 CGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---GKVAIDLFYKMEA 556
            G ++ A +    +  +  + +W +++ A+ + G+   GKVA D  ++++ 
Sbjct: 462 AGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDP 512



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 208/444 (46%), Gaps = 12/444 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K      A+ L      R+V TW A++   V NG     L  +S MR   I  + FT
Sbjct: 51  MYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFT 110

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPC  KA   L+    G ++H L +K G  S  F+  S   MY+K     +AR++FD M 
Sbjct: 111 FPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP 170

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ ++  WN+ +S     G+  +AL  F E +  G   N  TF A L AC  +S+  LG 
Sbjct: 171 ER-NIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGR 229

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   ++SG    V VAN LI  Y +C ++  +  +   +   + VSW SM+  +VQND
Sbjct: 230 QLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQND 289

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA   F   +  G +P      + +SA   L  L  GK +H  A+K   V ++ +G+
Sbjct: 290 EEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGS 349

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR--TVQLEGL 358
            L+DMY KC  +    R F +M  ++ ++W  +I GYA       A+ LF   T     +
Sbjct: 350 ALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRV 409

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIH-----GYIIRKGLSDLVILNAIVDVYGKCGNID 413
             + +    VL ACS    ++   EI       Y I  G         +VD+ G+ G ++
Sbjct: 410 APNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYA---CVVDLLGRAGMVE 466

Query: 414 YSRNVFESIESKDVVS-WTSMISS 436
            +    + +  +  VS W +++ +
Sbjct: 467 QAYQFIKKMPIRPTVSVWGALLGA 490



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 166/368 (45%), Gaps = 21/368 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G   +A ++FD++ +R + TWNA L   V  G     L  +   R  G   +  T
Sbjct: 152 MYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLIT 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   + ACA    L  G ++HG VL+ G+++   + N L+  Y KC+    +  +F  + 
Sbjct: 212 FCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGIS 271

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  DV  W S+I +Y  + +  +A  +F   ++ G+    +   + L AC   S   +G 
Sbjct: 272 KPNDVS-WCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGK 330

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   VK+     ++V +AL+ MY +CG + +A     ++  ++ V+WN+M+ G+    
Sbjct: 331 SVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQG 390

Query: 241 LYCKAMQFFRELQGAGQK--PDQVCTVNAVSASGRLGNLLNGKELHA-----YAIKQGFV 293
               A+  F E+     +  P+ V  V  +SA  R G++  G E+       Y I+ G  
Sbjct: 391 QADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPG-- 448

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
                     + YA  C V+ +GR      A  FI    I    +     L A ++F   
Sbjct: 449 ---------AEHYA--CVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKS 497

Query: 354 QLEGLDAD 361
           +L  + AD
Sbjct: 498 ELGKVAAD 505


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/661 (37%), Positives = 394/661 (59%), Gaps = 7/661 (1%)

Query: 181 EIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS---WNSMLTGF 236
           ++HAA +KSG+        ++L+   A    +   A  L++L  +  +S   +N ++   
Sbjct: 34  QLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAL 93

Query: 237 VQNDLYCKAMQFFRE-LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +       A+  F E L  A   PDQ     A+ +  R+  L  G+ + AYA+K+G ++D
Sbjct: 94  LHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMAD 153

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             + ++L+ MYA C  V     +F  +     + W  II  Y +N   ++ +E+F+ +  
Sbjct: 154 RFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLE 213

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
            G+  D + + SV+ AC  +      K +  Y+  KGL  +  ++ A++D+Y KCG +  
Sbjct: 214 VGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGK 273

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R +F+ ++S+DVV+W++MIS Y       EAL LF  M  A VE + +T+VS LSA + 
Sbjct: 274 ARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAV 333

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L  L+ GK ++ +I RK  +L   + ++LVD YA+CG +D A + F  +  K+   WT++
Sbjct: 334 LGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTAL 393

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I     +GRG+ A++LF  M   S  P  +TF+ +L ACSHS L+ EG++  + M  DY 
Sbjct: 394 IKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYG 453

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  EHY C+VDLLGRA  ++EAYQF+R+M IEP A +W ALL +C VH N E+GE   
Sbjct: 454 IKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEAL 513

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           K+++ L+P + G+Y+L+SN++A+  +WK+   +R  M+  G++KTPG S IE+   +  F
Sbjct: 514 KQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEF 573

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
            A D  H +  EIY+K+ E+ +++ +  GY+  T  V   V+E EK   +  HSE+LAIA
Sbjct: 574 FAEDSDHPQLKEIYQKVEEMIDRI-KMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIA 632

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G++K   G+ IR++KNLRVC DCHS  KL+S+++ RE+VVRD NRFHHF+ G CSC DY
Sbjct: 633 FGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDY 692

Query: 835 W 835
           W
Sbjct: 693 W 693



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 251/496 (50%), Gaps = 30/496 (6%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
           +N ++ A +  G P   L  +  M  V  +  D  T  C +K+C+ +  LD G  I    
Sbjct: 86  YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           +K G  +  F+++SL+ MYA C D   A+ LFD + E+  VV+WN+II+AY  +G  +E 
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAV-EENGVVMWNAIITAYMKNGNWMEV 204

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
           + +F+ M  VG+  +  T V+ + AC       LG  +     + G      +  ALI M
Sbjct: 205 VEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDM 264

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           YA+CG++ +A  +   ++++D V+W++M++G+ Q D   +A+  F E+Q A  +P+ V  
Sbjct: 265 YAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTM 324

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           V+ +SA   LG L  GK +H+Y  ++     + +G  L+D YAKC C++     F  M  
Sbjct: 325 VSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPV 384

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA-DVMIIGSVLMACSGLKCMSQTKE 383
           ++  +WT +I G A N    +ALELF +++   ++  DV  IG VLMACS   C+ +   
Sbjct: 385 KNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIG-VLMACSH-SCLVEEGR 442

Query: 384 IH------GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
            H       Y I+           +VD+ G+ G ID +     ++    + V W +++SS
Sbjct: 443 RHFDSMTQDYGIKPRAEH---YGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSS 499

Query: 437 -YVHNG--LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
             VH    +  EAL+    +N ++  S    L+S + A+        G+  N  +IRK  
Sbjct: 500 CAVHKNVEIGEEALKQIVSLNPSH--SGDYILLSNIYASV-------GQWKNAAMIRKEM 550

Query: 494 N---LEGSVASSLVDM 506
               +E +   SL+++
Sbjct: 551 KDRGIEKTPGCSLIEL 566



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 140/270 (51%), Gaps = 1/270 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C  V  A+ LFD V +  V  WNA++ AY+ NG  + V+E +  M  +G++ D  T
Sbjct: 163 MYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEIT 222

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  + D   G  +   V + G      ++ +L+ MYAKC +  KAR+LFD M 
Sbjct: 223 LVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGM- 281

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  DVV W+++IS Y+ + QC EAL LF EMQ   +  N  T V+ L AC        G 
Sbjct: 282 QSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGK 341

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H+   +   +L + +  AL+  YA+CG + +A      +  K+S +W +++ G   N 
Sbjct: 342 WVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNG 401

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
              +A++ F  ++ A  +P  V  +  + A
Sbjct: 402 RGREALELFSSMRKASIEPTDVTFIGVLMA 431



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 23/145 (15%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG + DA + F+ +  +  +TW A++    +NG     LE +S MR   I     TF
Sbjct: 366 YAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTF 425

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCG---YDS--TDFIVNSLVAMYAKCYDF------- 109
             V+ AC+           H  +++ G   +DS   D+ +      Y    D        
Sbjct: 426 IGVLMACS-----------HSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLI 474

Query: 110 RKARQLFDRMGEKEDVVLWNSIISA 134
            +A Q    M  + + V+W +++S+
Sbjct: 475 DEAYQFIRTMPIEPNAVIWRALLSS 499


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/681 (36%), Positives = 403/681 (59%), Gaps = 3/681 (0%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++AC   K L  G  IH  V+  G  +  F+  +L+ +Y  C+ +  A+ +FD M    
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLGMEI 182
           ++ LWN +++ Y+ +   +EAL LF ++     L  ++YT+ + L+AC       LG  I
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H   VK+G  + + V ++L+ MYA+C    +A  +  ++  KD   WN++++ + Q+  +
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A+++F  ++  G +P+ V    A+S+  RL +L  G E+H   I  GF+ D  I + L
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMY KC  +     VF QM  +  ++W ++I+GY      +  ++LF+ +  EG+   +
Sbjct: 249 VDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTL 308

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFES 421
             + S++M CS    + + K +HGY IR  + SD+ I ++++D+Y KCG ++ + N+F+ 
Sbjct: 309 TTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKL 368

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           I    VVSW  MIS YV  G   EAL LF  M ++ VE D+IT  S L+A S L+ L+KG
Sbjct: 369 IPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKG 428

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           +E++  II K  +    V  +L+DMYA+CGA+D A  VF C+  +DL+ WTSMI A G H
Sbjct: 429 EEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSH 488

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G+  VA++LF +M   +  PD +TFLA+L AC H+GL++EG  +   M   Y + P  EH
Sbjct: 489 GQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEH 548

Query: 602 YACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           Y+CL+DLLGRA  L EAY+ + ++ +I    E+   L  ACR+H N +LG  +A+ L++ 
Sbjct: 549 YSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDK 608

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP +   Y+L+SN++A++ KW +V  VR +M+  GLKK PG SWIEI  KI  F   D S
Sbjct: 609 DPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNS 668

Query: 721 HSESDEIYKKLAEITEKLERE 741
           H   + ++K L+ +++ +E E
Sbjct: 669 HLHLELVFKCLSYLSDHMEDE 689



 Score =  292 bits (747), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 181/551 (32%), Positives = 286/551 (51%), Gaps = 15/551 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR-TVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDA 58
           +Y  C     A+ +FD +     +  WN ++  Y  N   +  LE + ++     +  D+
Sbjct: 47  LYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDS 106

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           +T+P V+KAC  L     G  IH  ++K G      + +SLV MYAKC  F KA  LF+ 
Sbjct: 107 YTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNE 166

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M EK DV  WN++IS Y  SG   EAL  F  M+R G   N+ T   A+ +C        
Sbjct: 167 MPEK-DVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNR 225

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           GMEIH   + SG  L  ++++AL+ MY +CG +  A  V  Q+  K  V+WNSM++G+  
Sbjct: 226 GMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGL 285

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                  +Q F+ +   G KP      + +    R   LL GK +H Y I+    SD+ I
Sbjct: 286 KGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFI 345

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            ++LMD+Y KC  V     +F  +     +SW  +I+GY       +AL LF  ++   +
Sbjct: 346 NSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYV 405

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
           + D +   SVL ACS L  + + +EIH  II K L ++ V++ A++D+Y KCG +D + +
Sbjct: 406 EPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFS 465

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ +  +D+VSWTSMI++Y  +G A  ALELF  M ++N++ D +T ++ LSA     +
Sbjct: 466 VFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGL 525

Query: 478 LKKGKELNGFIIRKGFNLEGSVA-----SSLVDMYARCGALDIANKVF--NCVQTKDLIL 530
           + +G     +   +  N+ G +      S L+D+  R G L  A ++   N     D+ L
Sbjct: 526 VDEG----CYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVEL 581

Query: 531 WTSMINANGLH 541
            +++ +A  LH
Sbjct: 582 LSTLFSACRLH 592


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/740 (36%), Positives = 421/740 (56%), Gaps = 49/740 (6%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D+  WN  IS+Y  +G+C EAL +F+ M R   V+        L+  E      L  E+ 
Sbjct: 63  DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122

Query: 184 AATVKS----------GQNL-------------QVYVANALIAMYARCGKMTEAAGVLYQ 220
              + S           +NL              V   N +++ YA+ G + +A  V  +
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +  K+ VSWN++L+ +VQN    +A   F+  +              VS +  LG  +  
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA----------LVSWNCLLGGFVKK 232

Query: 281 KELHAYAIKQGF----VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           K++     +Q F    V D+   NT++  YA+   ++   ++F +   QD  +WT +++G
Sbjct: 233 KKI--VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290

Query: 337 YAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           Y QN    +A ELF +  +   +  + M+ G V     G + M   KE+   +  + +S 
Sbjct: 291 YIQNRMVEEARELFDKMPERNEVSWNAMLAGYV----QGER-MEMAKELFDVMPCRNVS- 344

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
               N ++  Y +CG I  ++N+F+ +  +D VSW +MI+ Y  +G + EAL LF  M  
Sbjct: 345 --TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
                +  +  SALS  + +  L+ GK+L+G +++ G+     V ++L+ MY +CG+++ 
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           AN +F  +  KD++ W +MI     HG G+VA+  F  M+ E   PD  T +A+L ACSH
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           +GL+++G+++   M  DY + P  +HYAC+VDLLGRA  LE+A+  +++M  EP A +W 
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
            LLGA RVH N EL E  A K+  ++P N G YVL+SN++A+S +W DV ++R+RMR  G
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           +KK PG SWIEI NK H+F   D+ H E DEI+  L E+  ++ ++ GYV++T  VLH+V
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRM-KKAGYVSKTSVVLHDV 701

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           EEEEK +M+  HSERLA+AYG+++ + G  IR+ KNLRVC DCH+  K ++R+ GR +++
Sbjct: 702 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIIL 761

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD NRFHHF+ G CSCGDYW
Sbjct: 762 RDNNRFHHFKDGSCSCGDYW 781



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 153/589 (25%), Positives = 284/589 (48%), Gaps = 53/589 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G   +A ++F ++ + +  ++N M+  Y+ NGE     + +  M       D  ++
Sbjct: 74  YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM----PERDLVSW 129

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLK---CGYDSTDFIVNSLVAMYAK--CYDFRKARQLF 116
             +IK     ++L    ++  ++ +   C +       N++++ YA+  C D   AR +F
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPERDVCSW-------NTMLSGYAQNGCVD--DARSVF 180

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           DRM EK DV  WN+++SAY  + +  EA  LF+  +   LV+           C    F 
Sbjct: 181 DRMPEKNDVS-WNALLSAYVQNSKMEEACMLFKSRENWALVS---------WNCLLGGFV 230

Query: 177 TLGMEIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                + A       N++  V+ N +I  YA+ GK+ EA  +  +   +D  +W +M++G
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--- 292
           ++QN +  +A + F          D++   N VS +  L   + G+ +     K+ F   
Sbjct: 291 YIQNRMVEEARELF----------DKMPERNEVSWNAMLAGYVQGERME--MAKELFDVM 338

Query: 293 -VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
              ++   NT++  YA+C  ++    +F +M  +D +SW  +IAGY+Q+    +AL LF 
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
            ++ EG   +     S L  C+ +  +   K++HG +++ G  +   + NA++ +Y KCG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
           +I+ + ++F+ +  KD+VSW +MI+ Y  +G    AL  F  M    ++ D  T+V+ LS
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518

Query: 471 AASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDL 528
           A S   ++ KG++    + +  G        + +VD+  R G L D  N + N     D 
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578

Query: 529 ILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            +W +++ A+ +HG     + A D  + ME E+        L+ LYA S
Sbjct: 579 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSG--MYVLLSNLYASS 625



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 183/377 (48%), Gaps = 14/377 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G + +A QLFD+   + VFTW AM+  Y+ N       E + +M       +  ++
Sbjct: 260 YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSW 315

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++      + ++   ++   V+ C   ST    N+++  YA+C    +A+ LFD+M  
Sbjct: 316 NAMLAGYVQGERMEMAKELFD-VMPCRNVST---WNTMITGYAQCGKISEAKNLFDKM-P 370

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D V W ++I+ YS SG   EAL LF +M+R G   N  +F +AL  C D     LG +
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   VK G     +V NAL+ MY +CG + EA  +  ++  KD VSWN+M+ G+ ++  
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGF 490

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GFVSDLQIG 299
              A++FF  ++  G KPD    V  +SA    G +  G++ + Y + Q  G + + Q  
Sbjct: 491 GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ-YFYTMTQDYGVMPNSQHY 549

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQLEG 357
             ++D+  +   +     +   M  + D   W T++ A     N  L      +   +E 
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609

Query: 358 LDADVMIIGSVLMACSG 374
            ++ + ++ S L A SG
Sbjct: 610 ENSGMYVLLSNLYASSG 626



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 138/300 (46%), Gaps = 23/300 (7%)

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           SD++  N  +  Y +    N   RVF +M     +S+  +I+GY +N     A +LF  +
Sbjct: 62  SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121

Query: 354 QLEGLDA-DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
               L + +VMI G V       + + + +E+   +  +   D+   N ++  Y + G +
Sbjct: 122 PERDLVSWNVMIKGYVRN-----RNLGKARELFEIMPER---DVCSWNTMLSGYAQNGCV 173

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D +R+VF+ +  K+ VSW +++S+YV N    EA  LF          ++  LVS     
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK-------SRENWALVSWNCLL 226

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIANKVFNCVQTKDLILW 531
                 KK  E   F      N+   V+ ++++  YA+ G +D A ++F+    +D+  W
Sbjct: 227 GGFVKKKKIVEARQFF--DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
           T+M++    +   + A +LF KM       + +++ A+L        +   K+  ++M C
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPC 340



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 1/140 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A  LF +++ + + +WN M+  Y  +G     L  +  M+  G+  D  T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    +D G +  + +    G          +V +  +      A  L   M
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572

Query: 120 GEKEDVVLWNSIISAYSASG 139
             + D  +W +++ A    G
Sbjct: 573 PFEPDAAIWGTLLGASRVHG 592



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 20/213 (9%)

Query: 379 SQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
           SQTK +    ++ G SD+   N  +  Y + G  + +  VF+ +     VS+  MIS Y+
Sbjct: 51  SQTKPL----LKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYL 106

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NG    A +LF  M E ++ S ++ +   +   +    L K +EL  F I      E  
Sbjct: 107 RNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRN----LGKAREL--FEIMP----ERD 156

Query: 499 VAS--SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
           V S  +++  YA+ G +D A  VF+ +  K+ + W ++++A   + + + A  LF   E 
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN 216

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            +     +++  LL        I E ++F + M
Sbjct: 217 WAL----VSWNCLLGGFVKKKKIVEARQFFDSM 245


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/684 (36%), Positives = 400/684 (58%), Gaps = 39/684 (5%)

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
           K   NLQ   +  LI      G +  A  +  ++   D  +W  +++G  Q+    KA+ 
Sbjct: 4   KLPANLQPCQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAID 63

Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
            +  L     +PD+   ++   A    G+L+  K++H  AI+ GF  DL +GN L+DM+ 
Sbjct: 64  IYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFG 123

Query: 308 KCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
           KC  VN    VF  M  +D +SWT++   Y       + + LFR + L G+ A+ + + S
Sbjct: 124 KCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSS 183

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L AC+    +   +E+HG+I+R  +  ++ + +A+V++Y     +  +R VF+S+  +D
Sbjct: 184 ILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRD 241

Query: 427 VVSWTSMISSY-----------------------------------VHNGLANEALELFY 451
           +VSW  M+++Y                                   + NG    AL +  
Sbjct: 242 IVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILC 301

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
            M ++ ++ + IT+VSAL   ++L  L+ GKE++G++ R  F  + ++ ++LV +YA+CG
Sbjct: 302 KMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCG 361

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            L+++  VFN +  KD++ W +MI AN +HG+G  ++ LF KM      P+ +TF+ +L 
Sbjct: 362 DLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLS 421

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
            CSHS L +EG      M  ++ + P  +HY+C+VD+L RA  LEEAY F+R M IEPTA
Sbjct: 422 GCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTA 481

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
             W ALLGACRV+ N ELG + A +L E++P N GNYVL+SN+   ++KW +  ++R  M
Sbjct: 482 AAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMM 541

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           R  GL KTPG SW+++ NK++SF+  DKS+ + D IY+ L EI EK+ R  GY   T FV
Sbjct: 542 RDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKM-RLDGYQPNTDFV 600

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           L NV++E++ + L  HSERLA+A+G+L S+  + +R+ KNLR+C DCH+  KL++++ G 
Sbjct: 601 LQNVDQEQREETLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGM 660

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           +++VRD+ RFHHF  G C+C D+W
Sbjct: 661 QIIVRDSLRFHHFRDGYCTCNDFW 684



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 191/403 (47%), Gaps = 38/403 (9%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A  LFDK+ +  + TW  ++  +  +G P + ++ YS +    +  D F    V 
Sbjct: 25  GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KACA   DL    KIH   ++ G++    + N+L+ M+ KC     AR +FD M  K DV
Sbjct: 85  KACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVK-DV 143

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V W S+   Y   G C + + LFREM   G+  N+ T  + L AC D  +  LG E+H  
Sbjct: 144 VSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACAD--YIKLGREVHGF 201

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT----------- 234
            +++     VYV++AL+ MYA    + +A  V   + ++D VSWN MLT           
Sbjct: 202 ILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERG 261

Query: 235 ------------------------GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
                                   G +QN  +  A+    ++Q +G KP+++  V+A+  
Sbjct: 262 LGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPG 321

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
              L +L  GKE+H Y  +  F+ D+ I   L+ +YAKC  +     VF  M  +D ++W
Sbjct: 322 CTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAW 381

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
            T+I   + +    ++L LF  +   G++ + +    VL  CS
Sbjct: 382 NTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCS 424



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 145/305 (47%), Gaps = 38/305 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+GKC  V  A  +FD +  + V +W +M   YV+ G   + +  +  M + GI  ++ T
Sbjct: 121 MFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLT 180

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA    L  G ++HG +L+   +   ++ ++LV MYA     ++AR +FD M 
Sbjct: 181 VSSILPACADYIKL--GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMY 238

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC---------- 170
            + D+V WN +++AY  + +    LGLF +M++ G+  N  ++ AA+  C          
Sbjct: 239 HR-DIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELAL 297

Query: 171 ------EDS-----------------SFETL--GMEIHAATVKSGQNLQVYVANALIAMY 205
                 +DS                 + E+L  G EIH    +      V +  AL+ +Y
Sbjct: 298 GILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLY 357

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
           A+CG +  +  V   +  KD V+WN+M+     +    +++  F ++  +G +P+ V  +
Sbjct: 358 AKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFI 417

Query: 266 NAVSA 270
             +S 
Sbjct: 418 GVLSG 422



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 37/69 (53%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  +  +F+ + ++ V  WN M+ A   +G+    L  +++M   G+  ++ T
Sbjct: 356 LYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVT 415

Query: 61  FPCVIKACA 69
           F  V+  C+
Sbjct: 416 FIGVLSGCS 424


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/705 (36%), Positives = 417/705 (59%), Gaps = 6/705 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++ K  S  DA ++F  V    V  WNA++   V N E    L+ + +M       ++FT
Sbjct: 191 LFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFT 250

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ ACA L++L+ G  + G V+KCG     F+  +++ +YAKC D  +A + F RM 
Sbjct: 251 FSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMP 310

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + +VV W +IIS +      + A   F+EM++VG   N YT  + L AC +       +
Sbjct: 311 IR-NVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAV 369

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLTGFVQN 239
           ++H+   K+G  L   V++ALI MY++ G +  +  V  ++E+ K+   W  M++ F Q+
Sbjct: 370 QLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQS 429

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A++ F+ +   G +PD+ C+ + +S    + +L  G+ +H Y +K G  +D+ +G
Sbjct: 430 GSTGRAVELFQRMLQEGLRPDKFCSSSVLSI---IDSLSLGRLIHCYILKIGLFTDISVG 486

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           ++L  MY+KC  +     VF QM  +D +SW ++I G+++++   +A++LFR + LE + 
Sbjct: 487 SSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIR 546

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNV 418
            D M + + L ACS L  + + KE+HGY +R  +   V++  A+V++Y KCG I  +R V
Sbjct: 547 PDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRV 606

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  KD  S +S++S Y  NG   +AL LF+ +  A++  DS T+ S + A + L+ L
Sbjct: 607 FDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSL 666

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             G +L+  + + G N E SV SSLV MY++CG++D  +KVF  ++  DLI WT+MI + 
Sbjct: 667 DIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSY 726

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             HG+G  A+ ++  M  E   PD +TF+ +L ACSH+G++ EG   L  M  +Y ++P 
Sbjct: 727 AQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPG 786

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
             HYAC+VDLLGR+  L+EA +F+ +M IEP A +W  LL AC+VH + ELG + AK+++
Sbjct: 787 YYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVI 846

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
           EL+P   G YV +SN+ A    W+DV ++R  M G+G+KK PG S
Sbjct: 847 ELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWS 891



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 175/573 (30%), Positives = 306/573 (53%), Gaps = 6/573 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K  S++ A +LFDK     V +WN ++     N         + +MR  G   + FT+
Sbjct: 91  YCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTY 150

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ AC  L     G  ++ L LK G+ S  ++   ++ ++AK   F  A ++F  +  
Sbjct: 151 GSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDV-L 209

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            E+VV WN+IIS    + +   AL LF +M     + N++TF + L AC        G  
Sbjct: 210 CENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRG 269

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +    +K G    V+V  A+I +YA+C  M +A     ++  ++ VSW ++++GFVQ D 
Sbjct: 270 VQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDD 329

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
              A  FF+E++  G+K +     + ++A      +    +LH++  K GF  D  + + 
Sbjct: 330 SISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSA 389

Query: 302 LMDMYAKCCCVNYMGRVFYQM-TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           L++MY+K   V+   RVF +M + ++   W  +I+ +AQ+    +A+ELF+ +  EGL  
Sbjct: 390 LINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRP 449

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     SVL   S +  +S  + IH YI++ GL +D+ + +++  +Y KCG+++ S  VF
Sbjct: 450 DKFCSSSVL---SIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVF 506

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  KD VSW SMI+ +  +  A +A++LF  M    +  D +TL +AL+A S+L  L+
Sbjct: 507 EQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLE 566

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           KGKE++G+ +R     E  V  +LV+MY++CGA+ +A +VF+ +  KD    +S+++   
Sbjct: 567 KGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYA 626

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
            +G  + A+ LF+++       D  T  +++ A
Sbjct: 627 QNGYIEDALLLFHEIRMADLWIDSFTVSSVIGA 659



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 257/508 (50%), Gaps = 7/508 (1%)

Query: 80  IHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           +H   LK     S  F+ NSL+  Y K      A +LFD+     +V+ WN +IS  + +
Sbjct: 67  LHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKT-PHPNVISWNILISGCNQN 125

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
               ++   F +M+  G   N +T+ + L AC        G  +++  +K+G     YV 
Sbjct: 126 FSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVR 185

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
             +I ++A+     +A  V   +  ++ V WN++++G V+N     A+  F ++      
Sbjct: 186 AGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFM 245

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P+     + ++A   L  L  G+ +  + IK G   D+ +G  ++D+YAKC  ++   + 
Sbjct: 246 PNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKE 305

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F +M  ++ +SWTTII+G+ Q +  + A   F+ ++  G   +   I SVL AC+    +
Sbjct: 306 FLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMI 365

Query: 379 SQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIES-KDVVSWTSMISS 436
            +  ++H +I + G   D  + +A++++Y K G +D S  VF  +ES K++  W  MIS+
Sbjct: 366 KEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISA 425

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           +  +G    A+ELF  M +  +  D     S LS   SLS+   G+ ++ +I++ G   +
Sbjct: 426 FAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL---GRLIHCYILKIGLFTD 482

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
            SV SSL  MY++CG+L+ +  VF  +  KD + W SMI     H   + A+ LF +M  
Sbjct: 483 ISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLL 542

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKK 584
           E   PD +T  A L ACS    + +GK+
Sbjct: 543 EEIRPDQMTLTAALTACSALHSLEKGKE 570


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 229/557 (41%), Positives = 357/557 (64%), Gaps = 3/557 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GK+LHA   + G   +  +   L+++Y  C  +     +F +++ ++   W  +I GYA 
Sbjct: 20  GKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAW 79

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVI 398
           N  +  A+ L+  ++  GL  D      VL ACS L  M + K+IH  +IR GL SD+ +
Sbjct: 80  NGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFV 139

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
             A++D+Y KCG ++ +R VF+ I+ +DVV W SM+++Y  NG  +E+L L  +M    +
Sbjct: 140 GAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGL 199

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           +    T V +++A++   +L +GKEL+G+  R GF     V ++L+DMYA+ G++++A  
Sbjct: 200 KPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARS 259

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           +F  ++ K ++ W +MI    +HG    A+DLF +M+ +   PDHITF+ +L ACSH GL
Sbjct: 260 LFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVL-PDHITFVGVLAACSHGGL 318

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           +NEGK     M  D+ + P  +HY C++DLLG    LEEAY+ +  M++EP A VW ALL
Sbjct: 319 LNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALL 378

Query: 639 GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
            +C++H N E+GE+  +KL+EL+P + GNYV++SN++A + KW  V ++R  M   GLKK
Sbjct: 379 HSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKK 438

Query: 699 TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
           +   SWIE+GNK+H+F++ D SH +S+ IY +L   T KL +E GY  Q   V H+VE++
Sbjct: 439 SIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKR-TGKLMKEAGYAPQVGSVFHDVEDD 497

Query: 759 EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
           EKV M+  HSERLAIA+G++ ++ G+ + I KNLR+C DCH   K +S++  RE+ +RD 
Sbjct: 498 EKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDV 557

Query: 819 NRFHHFEAGVCSCGDYW 835
           NR+HHF+ GVCSCGD+W
Sbjct: 558 NRYHHFKDGVCSCGDFW 574



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/382 (33%), Positives = 199/382 (52%), Gaps = 15/382 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  C S+ +A  LFD++S+R +F WN M+  Y  NG     +  Y +MR  G+  D FT
Sbjct: 45  LYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFT 104

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V+KAC+ L  ++ G KIH  V++ G +S  F+  +L+ MYAKC     ARQ+FD++ 
Sbjct: 105 FPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKID 164

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DVV WNS+++ YS +GQ  E+L L R M   GL     TFV ++ A  D+     G 
Sbjct: 165 ER-DVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGK 223

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H  + + G      V  AL+ MYA+ G +  A  +   LE K  VSWN+M+TG+  + 
Sbjct: 224 ELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHG 283

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F+E++G    PD +  V  ++A    G LLN  ++H     +  +SD  I  
Sbjct: 284 HANEALDLFKEMKGK-VLPDHITFVGVLAACSH-GGLLNEGKMHF----RSMISDFNIWP 337

Query: 301 T------LMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALELFRT 352
           T      ++D+   C  +    ++  +M  + D   W  ++       N  +  L L + 
Sbjct: 338 TVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKL 397

Query: 353 VQLEGLDADVMIIGSVLMACSG 374
           V+LE  D    +I S + A +G
Sbjct: 398 VELEPDDGGNYVILSNMYAQAG 419



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 199/383 (51%), Gaps = 13/383 (3%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++++C + K ++ G ++H  + + G      +   LV +Y  C     A  LFDR+ 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRI- 62

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K ++ LWN +I  Y+ +G    A+ L+ +M+  GLV + +TF   L+AC   S    G 
Sbjct: 63  SKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGK 122

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   ++SG    V+V  ALI MYA+CG +  A  V  +++ +D V WNSML  + QN 
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNG 182

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +++   R +   G KP +   V +++AS   G L  GKELH Y+ + GF S+ ++  
Sbjct: 183 QPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKT 242

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LMDMYAK   VN    +F  +  +  +SW  +I GYA +    +AL+LF+ ++ + L  
Sbjct: 243 ALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLPD 302

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI------VDVYGKCGNIDY 414
            +  +G VL ACS    +++ K +H    R  +SD  I   +      +D+ G CG ++ 
Sbjct: 303 HITFVG-VLAACSHGGLLNEGK-MH---FRSMISDFNIWPTVQHYTCMIDLLGHCGRLEE 357

Query: 415 S-RNVFESIESKDVVSWTSMISS 436
           + + + E     D   W +++ S
Sbjct: 358 AYKLIMEMRVEPDAGVWGALLHS 380



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 77/144 (53%), Gaps = 3/144 (2%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           ++ GK+L+  I + G +    +A+ LV++Y  C +L  A+ +F+ +  ++L LW  MI  
Sbjct: 17  IEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRG 76

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLD 596
              +G  ++AI L+Y+M      PD  TF  +L ACS    + EGKK   +++R   + D
Sbjct: 77  YAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESD 136

Query: 597 PWPEHYACLVDLLGRANHLEEAYQ 620
            +    A L+D+  +   +E A Q
Sbjct: 137 VFVG--AALIDMYAKCGCVESARQ 158


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 279/825 (33%), Positives = 454/825 (55%), Gaps = 56/825 (6%)

Query: 64  VIKACAMLKDLDCGAKIHG-LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           ++++C    DL  G  +H  LVL     ++ F+ N L+ MY+ C D   A +LF  M  +
Sbjct: 26  LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM-PR 84

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN--------------AYTFVAA-- 166
            + V W +++S  S +    +AL  F  M+R G+                  +T  A+  
Sbjct: 85  RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHC 144

Query: 167 --------------------------------LQACEDSSFETLGMEIHAATVKSGQNL- 193
                                           LQ+C  +     G  +HA  V SG    
Sbjct: 145 HSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAA 204

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
             ++AN LI MY+ C  +  A  +   +  +++VSW ++++G  QN ++  A+  F  ++
Sbjct: 205 STFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMR 264

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
            AG  P +    +A  A+  LG  L  +   A A   GF ++L + + L DMY+KC  ++
Sbjct: 265 RAGVAPTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGLLS 323

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMAC 372
              RVF QM  +D ++WT +I GYA+N     A+  FR ++ EGL  AD  +  SVL A 
Sbjct: 324 EACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSAS 383

Query: 373 SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE-SIESKDVVSW 430
            GLK    +K IH  + + G   ++ + NA++D+Y K  +++ +  V +      +VVS 
Sbjct: 384 GGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSG 443

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
           TSMI  Y+      EAL ++  +    VE +  T  S +   +  ++L++G +L+  +I+
Sbjct: 444 TSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIK 503

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
                +  V S+LVDMY +CG + ++ ++FN ++ +  I W ++IN    HG G+ AI  
Sbjct: 504 TDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQA 563

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLG 610
           F +M      P+HI F++LL ACSH+GL++EG K+   M+  + ++P  EHY+C++D  G
Sbjct: 564 FDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYG 623

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVL 670
           RA  L+EAY+F+  M I+P A  WC+LLGACR+  +KELGE+ A+ L++L+PGN G +V 
Sbjct: 624 RAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVS 683

Query: 671 ISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKK 730
           +S ++A+  +W+DV+ VR  MR S +KK PG SW++   K H F + D SH +  +IY+K
Sbjct: 684 LSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEK 743

Query: 731 LAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITK 790
           L E+T +++ E GY+  T F+  N+E+  K ++L  HSER+A+A+ ++       I + K
Sbjct: 744 LEELTTRIKEE-GYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKK 802

Query: 791 NLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           NLR+C+DCH+  K + ++  R+++VRD +RFHHF  G CSCGDYW
Sbjct: 803 NLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 847



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 212/454 (46%), Gaps = 33/454 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C  +  A +LF  + +R   +W  ++     N      L  ++ MR  G++   F 
Sbjct: 215 MYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFA 274

Query: 61  FPCVIKACAMLKDL----DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
                +A A L        C A         G+D+  F+ ++L  MY+KC    +A ++F
Sbjct: 275 LSSAARAAAALGAPLRARSCTASA-----SVGFDTELFVASNLADMYSKCGLLSEACRVF 329

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSF 175
           D+M +K D V W ++I  Y+ +G    A+  FR+M+R GLV  + + F + L A      
Sbjct: 330 DQMPQK-DAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKD 388

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN----- 230
             L   IH    K+G  L+V V NALI MYA+   +  A+ VL      D   WN     
Sbjct: 389 GWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL----KIDPGGWNVVSGT 444

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           SM+ G+++ D   +A+  + EL+  G +P++    + +        L  G +LHA  IK 
Sbjct: 445 SMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKT 504

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
             + D  +G+TL+DMY KC  ++   ++F ++  +  I+W  +I  +AQ+    +A++ F
Sbjct: 505 DLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAF 564

Query: 351 RTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIV 403
             +   G+  + +   S+L ACS       GLK     KE HG   ++        + I+
Sbjct: 565 DRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEH-----YSCII 619

Query: 404 DVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           D YG+ G +D +      +  K +   W S++ +
Sbjct: 620 DTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 653



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 166/379 (43%), Gaps = 59/379 (15%)

Query: 259 PDQVCTVNAVS---ASGRLGNLLNGKELHAYAIKQGFVS-DLQIGNTLMDMYAKCCCVNY 314
           P    TV+  S   + GR G+L  G+ LHA  +  G  +    + N L+ MY+ C  +  
Sbjct: 15  PAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLAS 74

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI---------- 364
             R+F  M  ++ +SWTT+++G +QN  H  AL  F  ++  G+    +I          
Sbjct: 75  ALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLG 134

Query: 365 --------------------------------------IGSVLMACSGLKCMSQTKEIHG 386
                                                 + S+L +C     + + + +H 
Sbjct: 135 PKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHA 194

Query: 387 YIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
            ++  G   +   + N ++ +Y  C ++  +  +F ++  ++ VSWT+++S    N +  
Sbjct: 195 RLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHA 254

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           +AL  F  M  A V      L SA  AA++L    + +         GF+ E  VAS+L 
Sbjct: 255 DALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTAS-ASVGFDTELFVASNLA 313

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF-APDH 563
           DMY++CG L  A +VF+ +  KD + WT+MI+    +G  + A+  F  M+ E     D 
Sbjct: 314 DMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQ 373

Query: 564 ITFLALLYACSHSGLINEG 582
             F ++L A   SG + +G
Sbjct: 374 HVFCSVLSA---SGGLKDG 389


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/614 (39%), Positives = 385/614 (62%), Gaps = 4/614 (0%)

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRE-LQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           D ++WNSML  FV +++  +A+Q + E L+ +   PD+    + +     L     GK L
Sbjct: 42  DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           H   +K    SDL I  TL++MYA C  +     +F +M  ++ + WT++I+GY +N+C 
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAI 402
            +AL L++ ++ +G   D + + +++ AC+ LK +    ++H +I    +    +L +A+
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVESD 461
           V++Y KCG++  +R VF+ +  KDV +W+++I  YV N  + EAL+LF  +   +N+  +
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
            +T+++ +SA + L  L+ G+ ++ +I R       S+ +SL+DM+++CG +D A ++F+
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFD 341

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  KDLI W SM+N   LHG G+ A+  F+ M+     PD ITF+ +L ACSH+GL+ E
Sbjct: 342 SMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQE 401

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           GKK    +   Y +    EHY C+VDLL RA  L EA +F+R M ++P   +W ++LGAC
Sbjct: 402 GKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGAC 461

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           RV++N ELGE  A+ LLEL+P N G Y+L+SN++A  + W +V++VR  M   G++KTPG
Sbjct: 462 RVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPG 521

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            S + I N  HSF+A D SH E  EI   L ++ EKL +  GYVA T  VL N+++ +K 
Sbjct: 522 CSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKL-KLVGYVADTSEVLLNIDDNKKE 580

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
           + +  HSE+LA+ YG+LKS  G  I I KNLRVC DCH+  KLVS+++ R++ +RD NRF
Sbjct: 581 ESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRF 640

Query: 822 HHFEAGVCSCGDYW 835
           HHF+ G CSC DYW
Sbjct: 641 HHFKDGSCSCRDYW 654



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 210/376 (55%), Gaps = 3/376 (0%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFTFPCVIKACA 69
           A  +F       V TWN+ML A+V++  P R L++Y+ M     +V D FTFP ++K CA
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
           +L +   G  +HG V+K    S  +I  +L+ MYA C D + AR LF+RMG +  VV W 
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV-WT 149

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           S+IS Y  +    EAL L+++M+  G   +  T    + AC +     +GM++H+   + 
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
              +   + +AL+ MYA+CG +  A  V  QL +KD  +W++++ G+V+N+   +A+Q F
Sbjct: 210 DMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLF 269

Query: 250 RELQ-GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           RE+  G+  +P++V  +  +SA  +LG+L  G+ +H Y  +      + + N+L+DM++K
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSK 329

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  ++   R+F  M+ +D ISW +++ G A +    +AL  F  +Q   L  D +    V
Sbjct: 330 CGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGV 389

Query: 369 LMACSGLKCMSQTKEI 384
           L ACS    + + K++
Sbjct: 390 LTACSHAGLVQEGKKL 405



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 228/419 (54%), Gaps = 5/419 (1%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
           DV+ WNS++ A+  S     AL  + EM +R   V + +TF + L+ C       +G  +
Sbjct: 42  DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H   VK   +  +Y+   L+ MYA CG +  A  +  ++ +++ V W SM++G+++N   
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A+  +++++  G  PD+V     VSA   L +L  G +LH++  +        +G+ L
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-LEGLDAD 361
           ++MYAKC  +    +VF Q++ +D  +W+ +I GY +NN   +AL+LFR V     +  +
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFE 420
            + I +V+ AC+ L  +   + +H YI R      V L N+++D++ KCG+ID ++ +F+
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFD 341

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
           S+  KD++SW SM++    +GL  EAL  F+LM   +++ D IT +  L+A S   ++++
Sbjct: 342 SMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQE 401

Query: 481 GKELNGFI-IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           GK+L   I    G  L+      +VD+  R G L  A +    +  + D  +W SM+ A
Sbjct: 402 GKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 146/284 (51%), Gaps = 2/284 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG +  A  LF+++  R    W +M+  Y+ N  P   L  Y +M   G S D  T
Sbjct: 123 MYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVT 182

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA LKDL  G K+H  + +        + ++LV MYAKC D + ARQ+FD++ 
Sbjct: 183 MATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLS 242

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLG 179
           +K DV  W+++I  Y  + +  EAL LFRE+     +  N  T +A + AC        G
Sbjct: 243 DK-DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETG 301

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H    ++ +   V + N+LI M+++CG +  A  +   +  KD +SWNSM+ G   +
Sbjct: 302 RWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALH 361

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
            L  +A+  F  +Q    +PD++  +  ++A    G +  GK+L
Sbjct: 362 GLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKL 405



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 143/275 (52%), Gaps = 3/275 (1%)

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD-ADVMIIGSVLM 370
           V Y   VF      D ++W +++  +  +N   +AL+ +  +     +  D     S+L 
Sbjct: 28  VGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87

Query: 371 ACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
            C+ L      K +HG +++  L SDL I   ++++Y  CG++  +R +FE +  ++ V 
Sbjct: 88  GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           WTSMIS Y+ N   NEAL L+  M E     D +T+ + +SA + L  L  G +L+  I 
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
                +   + S+LV+MYA+CG L  A +VF+ +  KD+  W+++I     + R   A+ 
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQ 267

Query: 550 LFYKMEAES-FAPDHITFLALLYACSHSGLINEGK 583
           LF ++   S   P+ +T LA++ AC+  G +  G+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 3/228 (1%)

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE-SDSITLVSALS 470
           + Y+ +VF      DV++W SM+ ++V++ +   AL+ +  M E +    D  T  S L 
Sbjct: 28  VGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
             + L   K GK L+G +++   + +  + ++L++MYA CG L  A  +F  +  ++ ++
Sbjct: 88  GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           WTSMI+    +     A+ L+ KME + F+PD +T   L+ AC+    +  G K    +R
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
            +  +       + LV++  +   L+ A Q    +  +     W AL+
Sbjct: 208 -EMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLS-DKDVYAWSALI 253


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/662 (38%), Positives = 394/662 (59%), Gaps = 8/662 (1%)

Query: 181 EIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS---WNSMLTGF 236
           ++HAA +KSG+        ++L+   A    +   A  L++L  +  +S   +N ++  F
Sbjct: 34  QLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAF 93

Query: 237 VQNDLYCKAMQFFRE-LQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
           +       A+  F E L  A   P DQ     A+ +  R+  L  G+ + AYA+K+G V+
Sbjct: 94  LHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVA 153

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D  + ++L+ MYA C  V     VF        + W  I+A Y +N   ++ +E+F+ + 
Sbjct: 154 DRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGML 213

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNID 413
             G+  D + + SV+ AC  +      K + G++  +GL+ +  ++ A++D+Y KCG I 
Sbjct: 214 EVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIG 273

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +R +F+ ++S+DVV+W++MIS Y       EAL LF  M  A VE + +T+VS LSA +
Sbjct: 274 KARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACA 333

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            L  L+ GK ++ ++ RK  +L   + ++LVD YA+CG +D A + F  +  K+   WT+
Sbjct: 334 VLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTA 393

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           +I     +GRG+ A++LF  M      P  +TF+ +L ACSHS L+ EG++  + M  DY
Sbjct: 394 LIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDY 453

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
            + P  EHY C+VDLLGRA  ++EAYQF+R+M IEP A +W ALL +C VH N  +GE  
Sbjct: 454 GIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEA 513

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHS 713
            K+++ L+P + G+YVL+SN++A++ +WKD   VR  M+  G++KTPG S IE+   +  
Sbjct: 514 LKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFE 573

Query: 714 FIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAI 773
           F A D  H E  EIY+K+ E+  ++ +  GYV  T  V   VEE EK   +  HSE+LAI
Sbjct: 574 FFAEDSDHPELREIYQKVEEMIGRI-KVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAI 632

Query: 774 AYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
           A+G++K   G+ IR++KNLRVC DCHS  KL+S+++ RE+VVRD N FHHF+ G CSC D
Sbjct: 633 AFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCND 692

Query: 834 YW 835
           YW
Sbjct: 693 YW 694



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 252/497 (50%), Gaps = 31/497 (6%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRM--RVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGL 83
           +N ++ A++  G P   L  +  M         D  T  C +K+C+ +  LD G  +   
Sbjct: 86  YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145

Query: 84  VLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE 143
            +K G  +  F+++SL+ MYA C D   AR +FD   E+  VV+WN+I++AY  +G  +E
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFD-AAEESGVVMWNAIVAAYLKNGDWME 204

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
            + +F+ M  VG+  +  T V+ + AC       LG  +     + G      +  AL+ 
Sbjct: 205 VVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMD 264

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           MYA+CG++ +A  +   ++++D V+W++M++G+ Q D   +A+  F E+Q A  +P+ V 
Sbjct: 265 MYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVT 324

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
            V+ +SA   LG L  GK +H+Y  ++       +G  L+D YAKC C++     F  M 
Sbjct: 325 MVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMP 384

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA-DVMIIGSVLMACSGLKCMSQTK 382
            ++  +WT +I G A N    +ALELF +++  G++  DV  IG VLMACS   C+ +  
Sbjct: 385 VKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIG-VLMACSH-SCLVEEG 442

Query: 383 EIH------GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMIS 435
             H       Y I+  +        +VD+ G+ G +D +     ++    + V W +++S
Sbjct: 443 RRHFDSMARDYGIKPRVEH---YGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLS 499

Query: 436 S-YVHN--GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           S  VH   G+  EAL+    +N ++  S    L+S + A++       G+  +  ++RK 
Sbjct: 500 SCAVHRNVGIGEEALKQIISLNPSH--SGDYVLLSNIYASA-------GQWKDAAMVRKE 550

Query: 493 FN---LEGSVASSLVDM 506
                +E +   SL+++
Sbjct: 551 MKDRGIEKTPGCSLIEL 567



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 1/270 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG V  A  +FD   +  V  WNA++ AY+ NG+ + V+E +  M  +G++ D  T
Sbjct: 164 MYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVT 223

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  + D   G  + G V + G      +V +L+ MYAKC +  KAR+LFD M 
Sbjct: 224 LVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGM- 282

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  DVV W+++IS Y+ + QC EALGLF EMQ   +  N  T V+ L AC        G 
Sbjct: 283 QSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGK 342

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H+   +   +L   +  AL+  YA+CG + +A      +  K+S +W +++ G   N 
Sbjct: 343 WVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNG 402

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
              +A++ F  ++ AG +P  V  +  + A
Sbjct: 403 RGREALELFSSMREAGIEPTDVTFIGVLMA 432



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 23/145 (15%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG + DA + F+ +  +  +TW A++    +NG     LE +S MR  GI     TF
Sbjct: 367 YAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTF 426

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCG---YDST--DFIVNSLVAMYAKCYDF------- 109
             V+ AC+           H  +++ G   +DS   D+ +   V  Y    D        
Sbjct: 427 IGVLMACS-----------HSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLV 475

Query: 110 RKARQLFDRMGEKEDVVLWNSIISA 134
            +A Q    M  + + V+W +++S+
Sbjct: 476 DEAYQFIRTMPIEPNAVIWRALLSS 500


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 270/746 (36%), Positives = 409/746 (54%), Gaps = 62/746 (8%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA----CEDSSFETLG 179
           D+V WN  ISAY   GQC  AL +F  M+R   VT        L      C    FE + 
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM- 117

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                       +  +   N +++ Y + G ++ A  +  Q+  KD VSWN+ML+GF QN
Sbjct: 118 -----------PDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL------GNLLNGKELHAYAIKQGFV 293
               +A + F          DQ+   N +S +G L      G + + + L    +    V
Sbjct: 167 GFVEEARKIF----------DQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIV 216

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S     N LM  Y +   ++    +F +M  +D ISW  +I GYAQN    +A  LF  +
Sbjct: 217 S----WNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272

Query: 354 QLEGLDADVMII------GSVLMACSGLKCMSQTKE------IHGYIIRKGLSDLVIL-- 399
            +  + A   ++      G +  A    + M +  E      I GY+  + +     L  
Sbjct: 273 PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFD 332

Query: 400 ----------NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
                     N +V  Y +CGNID ++ +F+ +  +D +SW +MIS Y  +G + EAL L
Sbjct: 333 QMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHL 392

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           F  M       +   L  ALS+ + ++ L+ GK+L+G +++ GF       ++L+ MY +
Sbjct: 393 FIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGK 452

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CG+++ A  VF  +  KD++ W +MI     HG GK A+ LF  M+  +  PD +T + +
Sbjct: 453 CGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKM-TIKPDDVTLVGV 511

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           L ACSH+GL+++G ++   M  +Y +    +HY C++DLLGRA  L+EA   ++SM   P
Sbjct: 512 LSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYP 571

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
            A  W ALLGA R+H + ELGE  A+K+ E++P N G YVL+SN++AAS +W++V ++R 
Sbjct: 572 DAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRS 631

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
           +MR  G+KK PG SW+EI NK H F   D SH E++ IY  L E+  +L+++ G+V+ T+
Sbjct: 632 KMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKD-GFVSSTK 690

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
            VLH+VEEEEK  ML  HSE+LA+A+G+L    G  IR+ KNLRVC DCH+  K +S++ 
Sbjct: 691 LVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKIT 750

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
            R+++VRD+NRFHHF  G CSCGDYW
Sbjct: 751 QRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 161/590 (27%), Positives = 272/590 (46%), Gaps = 67/590 (11%)

Query: 23  VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHG 82
           +  WN  + AY+  G+    L  ++ MR         T+  +I         DC  K   
Sbjct: 60  IVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYLSNNKFDCARK--- 112

Query: 83  LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCL 142
            V +   D      N +++ Y K  +   AR LF++M EK DVV WN+++S ++ +G   
Sbjct: 113 -VFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEK-DVVSWNAMLSGFAQNGFVE 170

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           EA  +F +M    LV N  ++   L A      +   +E       S  + ++   N L+
Sbjct: 171 EARKIFDQM----LVKNEISWNGLLSAY----VQNGRIEDARRLFDSKMDWEIVSWNCLM 222

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
             Y R  ++ +A  +  ++  +D +SWN M+TG+ QN L  +A + F EL      P + 
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL------PIRD 276

Query: 263 CTVNAVSASGRLGN------------LLNGKELHAYAIKQGFVSDLQIG----------- 299
                   SG + N            +    E+   A+  G+V   QI            
Sbjct: 277 VFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPS 336

Query: 300 ------NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
                 NT++  YA+C  ++    +F +M  +D ISW  +I+GYAQ+    +AL LF  +
Sbjct: 337 RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM 396

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
           + +G   +   +   L +C+ +  +   K++HG +++ G  +  +  NA++ +YGKCG+I
Sbjct: 397 KRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSI 456

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + + +VFE I  KD+VSW +MI+ Y  +G   EAL LF  M +  ++ D +TLV  LSA 
Sbjct: 457 EEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSAC 515

Query: 473 SSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLIL 530
           S   ++ KG E  N      G        + ++D+  R G LD A  +   +    D   
Sbjct: 516 SHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAAT 575

Query: 531 WTSMINANGLHGR---GKVAIDLFYKMEAESFAPDH---ITFLALLYACS 574
           W +++ A+ +HG    G+ A +  ++ME     PD+      L+ LYA S
Sbjct: 576 WGALLGASRIHGDTELGEKAAEKVFEME-----PDNSGMYVLLSNLYAAS 620



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 235/519 (45%), Gaps = 64/519 (12%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A ++F+K+  R + +WN ML  YV NG        +++M       D  ++  ++   A 
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP----EKDVVSWNAMLSGFAQ 165

Query: 71  LKDLDCGAKIHGLVL-----------------------KCGYDST-DFIV---NSLVAMY 103
              ++   KI   +L                       +  +DS  D+ +   N L+  Y
Sbjct: 166 NGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGY 225

Query: 104 AKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ----------- 152
            +      AR LFDRM  + D + WN +I+ Y+ +G   EA  LF E+            
Sbjct: 226 VRKKRLDDARSLFDRMPVR-DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMV 284

Query: 153 ----RVGLVTNAYTFVAALQACEDSSFETL-GMEIHAATVKSGQNL-------QVYVANA 200
               + G++  A      +    + S+  +    + +  ++  + L            N 
Sbjct: 285 SGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNT 344

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           ++  YA+CG + +A  +  ++  +D +SW +M++G+ Q+    +A+  F +++  G   +
Sbjct: 345 MVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILN 404

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
           +     A+S+   +  L  GK+LH   +K GF +    GN L+ MY KC  +     VF 
Sbjct: 405 RSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFE 464

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
            +T +D +SW T+IAGYA++    +AL LF ++++     DV ++G VL ACS    + +
Sbjct: 465 DITEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVG-VLSACSHTGLVDK 523

Query: 381 TKEIHGYIIRK-GLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMI-SS 436
             E    + +  G++ +      ++D+ G+ G +D + N+ +S+    D  +W +++ +S
Sbjct: 524 GMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGAS 583

Query: 437 YVHNG--LANEALELFYLMNEANVESDSITLVSALSAAS 473
            +H    L  +A E  + M   N  S    L+S L AAS
Sbjct: 584 RIHGDTELGEKAAEKVFEMEPDN--SGMYVLLSNLYAAS 620



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 12/238 (5%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y +CG++  A+ LFD++ QR   +W AM+  Y  +G+    L  + +M+  G  ++    
Sbjct: 349 YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSAL 408

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
            C + +CA +  L+ G ++HG ++K G+ +     N+L+AMY KC    +A  +F+ + E
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE 468

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D+V WN++I+ Y+  G   EAL LF  M ++ +  +  T V  L AC  +     GME
Sbjct: 469 K-DIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGME 526

Query: 182 IHAATVKSGQNLQVYVANA-----LIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
              +     QN  +  ANA     +I +  R G++ EA  ++  +    D+ +W ++L
Sbjct: 527 YFNSMY---QNYGI-TANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 147/369 (39%), Gaps = 93/369 (25%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           + + G V +A ++FD++  +   +WN +L AYV NG     +E   R+    +  +  ++
Sbjct: 163 FAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGR----IEDARRLFDSKMDWEIVSW 218

Query: 62  PCVIKACAMLKDLDCGA----------KIHGLVLKCGYDS-------------------- 91
            C++      K LD             KI   ++  GY                      
Sbjct: 219 NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVF 278

Query: 92  ------TDFIVNSL----------------------VAMYAKCYDFRKARQLFDRMGEK- 122
                 + F+ N +                      +A Y +     KAR+LFD+M  + 
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN 338

Query: 123 -----------------------------EDVVLWNSIISAYSASGQCLEALGLFREMQR 153
                                         D + W ++IS Y+ SGQ  EAL LF +M+R
Sbjct: 339 TSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKR 398

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G + N      AL +C + +   LG ++H   VK+G        NAL+AMY +CG + E
Sbjct: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEE 458

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V   +  KD VSWN+M+ G+ ++    +A+  F  ++    KPD V  V  +SA   
Sbjct: 459 AFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSH 517

Query: 274 LGNLLNGKE 282
            G +  G E
Sbjct: 518 TGLVDKGME 526



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 2/140 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ +A  +F+ ++++ + +WN M+  Y  +G     L  +  M+ + I  D  T
Sbjct: 449 MYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVT 507

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    +D G +  + +    G  +       ++ +  +     +A  L   M
Sbjct: 508 LVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSM 567

Query: 120 GEKEDVVLWNSIISAYSASG 139
               D   W +++ A    G
Sbjct: 568 PFYPDAATWGALLGASRIHG 587



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 17/213 (7%)

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           S+N   +I   D+V W   IS+Y+  G    AL +F  M   +  + +  ++S   + + 
Sbjct: 48  SKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYN-AMISGYLSNNK 106

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
               +K       +  K  + +    + ++  Y + G L  A  +FN +  KD++ W +M
Sbjct: 107 FDCARK-------VFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAM 159

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           ++    +G  + A  +F +M       + I++  LL A   +G I + ++  +  + D++
Sbjct: 160 LSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFD-SKMDWE 214

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
           +  W     CL+    R   L++A      M +
Sbjct: 215 IVSW----NCLMGGYVRKKRLDDARSLFDRMPV 243


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 291/859 (33%), Positives = 481/859 (55%), Gaps = 36/859 (4%)

Query: 1    MYGKC-GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV--- 56
            MYG C  S  DA  +FD +  R   +WN+++  Y   G+ +   + +S M+  G+     
Sbjct: 218  MYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFK 277

Query: 57   -DAFTFPCVIK-ACAMLKDLDCG----AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR 110
             + +TF  +I  AC+    +D G     ++   V K G+    ++ ++LV+ +A+     
Sbjct: 278  PNEYTFGSLITTACS---SVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTD 334

Query: 111  KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQA 169
             A+ +F++MG + +VV  N ++       Q   A  +F EM+  VG+  N+ ++V  L A
Sbjct: 335  DAKNIFEQMGVR-NVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGI--NSDSYVVLLSA 391

Query: 170  CEDSSFETL------GMEIHAATVKSGQN-LQVYVANALIAMYARCGKMTEAAGVLYQLE 222
               S F  L      G E+HA  +++G N  +V + N L+ MYA+ G + +A  V   + 
Sbjct: 392  F--SEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMV 449

Query: 223  NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
             KDSVSWNS+++G  QN+    A + F  ++  G  P     ++ +S+   LG ++ G++
Sbjct: 450  EKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQ 509

Query: 283  LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
            +H   +K G  +D+ + N L+ +YA+  C     +VF  M   D +SW ++I   + +  
Sbjct: 510  IHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEA 569

Query: 343  HL-KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILN 400
             + +A++ F  +   G     +   ++L A S L     + +IH  +++  LSD   I N
Sbjct: 570  SVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGN 629

Query: 401  AIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
            A++  YGKCG ++    +F  + E++D VSW SMIS Y+HN L ++A++L + M +    
Sbjct: 630  ALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQR 689

Query: 460  SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
             DS T  + LSA +S++ L++G E++   IR     +  V S+LVDMY++CG +D A++ 
Sbjct: 690  LDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRF 749

Query: 520  FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
            F  +  +++  W SMI+    HG G+ A+ LF +M  +   PDH+TF+ +L ACSH G +
Sbjct: 750  FELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFV 809

Query: 580  NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
             EG +  + M   Y+L P  EH++C+VDLLGRA  L+E   F+ SM ++P   +W  +LG
Sbjct: 810  EEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLG 869

Query: 640  A-CRVHS-NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
            A CR +  N ELG   A+ LLEL+P N  NYVL++N++A+  KW+DV + R  M+ + +K
Sbjct: 870  ACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVK 929

Query: 698  KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
            K  G SW+ + + +H F+A DK H E D IY KL E+  K+ R+ GY+ QT++ L ++E 
Sbjct: 930  KEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKM-RDAGYIPQTKYALFDLEL 988

Query: 758  EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL--FGRELVV 815
            E K ++L  HSE++A+A+ VL       IRI KNLRVC DCHS    +S++  F  ++ +
Sbjct: 989  ENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIIFFFLKMAM 1047

Query: 816  RDANRFHHFEAGVCSCGDY 834
            + +N         C CGD+
Sbjct: 1048 KPSNNI-WIRRQQCPCGDW 1065



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 194/695 (27%), Positives = 338/695 (48%), Gaps = 25/695 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G +  A++LFD++S R + TW  ++  Y  NG+P      +  M   G   + + 
Sbjct: 115 IYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYA 174

Query: 61  FPCVIKACAMLKDLDC--GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-FRKARQLFD 117
           F   ++AC       C  G +IHGL+ K  Y S   + N L++MY  C D    AR +FD
Sbjct: 175 FGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFD 234

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL----VTNAYTFVAAL-QACED 172
            +G +  +  WNSIIS YS  G  + A  LF  MQ+ GL      N YTF + +  AC  
Sbjct: 235 GIGIRNSIS-WNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSS 293

Query: 173 SSFETLGMEIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
             F    +E   A V KSG    +YV++AL++ +AR G   +A  +  Q+  ++ VS N 
Sbjct: 294 VDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNG 353

Query: 232 MLTGFVQNDLYCKAMQFFRELQG-AGQKPDQ-VCTVNAVSASGRLGN-LLNGKELHAYAI 288
           ++ G V+      A + F E++   G   D  V  ++A S    L      G+E+HA+ I
Sbjct: 354 LMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVI 413

Query: 289 KQGFVSD-LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           + G   + + IGN L++MYAK   +     VF  M  +D +SW ++I+G  QN C   A 
Sbjct: 414 RTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA 473

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVY 406
           E F  ++  G       + S L +C+ L  +   ++IH   ++ GL +D+ + NA++ +Y
Sbjct: 474 ESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALY 533

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA-NEALELFYLMNEANVESDSITL 465
            + G       VF  +   D VSW S+I +   +  + ++A++ F  M         +T 
Sbjct: 534 AETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTF 593

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF-NCVQ 524
           ++ LSA SSLS+ +   +++  +++   + + ++ ++L+  Y +CG ++   K+F    +
Sbjct: 594 INILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSE 653

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           T+D + W SMI+    +     A+DL + M  +    D  TF  +L AC+    +  G  
Sbjct: 654 TRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERG-- 711

Query: 585 FLEIMRCDYQ--LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
            +E+  C  +  L+      + LVD+  +   ++ A +F   M +      W +++    
Sbjct: 712 -MEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYA 769

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
            H + E    +  +++ LD G P ++V    V +A
Sbjct: 770 RHGHGEKALKLFTRMM-LD-GQPPDHVTFVGVLSA 802



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 262/514 (50%), Gaps = 22/514 (4%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H   +K G+    F+ N+L+ +Y +  D   A++LFD M  + ++V W  +IS Y+ +
Sbjct: 92  ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNR-NLVTWACLISGYTQN 150

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE--TLGMEIHAATVKSGQNLQVY 196
           G+  EA   FR+M R G + N Y F +AL+AC++S      LG++IH    K+     V 
Sbjct: 151 GKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVV 210

Query: 197 VANALIAMYARC-GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           V N LI+MY  C     +A  V   +  ++S+SWNS+++ + +      A   F  +Q  
Sbjct: 211 VCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKE 270

Query: 256 GQ----KPDQVC---TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           G     KP++      +    +S   G L   +++ A   K GF+ DL + + L+  +A+
Sbjct: 271 GLGFSFKPNEYTFGSLITTACSSVDFG-LCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-LEGLDADVMIIGS 367
               +    +F QM  ++ +S   ++ G  +      A ++F  ++ L G+++D  ++  
Sbjct: 330 FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV-- 387

Query: 368 VLMACSGLKCMSQ----TKEIHGYIIRKGLSD--LVILNAIVDVYGKCGNIDYSRNVFES 421
           +L A S    + +     +E+H ++IR GL+D  + I N +V++Y K G I  + +VFE 
Sbjct: 388 LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFEL 447

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  KD VSW S+IS    N  + +A E F+ M        + TL+S LS+ +SL  +  G
Sbjct: 448 MVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLG 507

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA-NGL 540
           ++++   ++ G + + SV+++L+ +YA  G      KVF+ +   D + W S+I A +  
Sbjct: 508 EQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDS 567

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
                 A+  F +M    +    +TF+ +L A S
Sbjct: 568 EASVSQAVKYFLQMMRGGWGLSRVTFINILSAVS 601



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 231/454 (50%), Gaps = 24/454 (5%)

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           L +++ TF + +   + S       E+H  ++K G    ++++N LI +Y R G +  A 
Sbjct: 67  LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 126

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA---SG 272
            +  ++ N++ V+W  +++G+ QN    +A   FR++  AG  P+     +A+ A   SG
Sbjct: 127 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC-CVNYMGRVFYQMTAQDFISWT 331
             G  L G ++H    K  + SD+ + N L+ MY  C    N    VF  +  ++ ISW 
Sbjct: 187 PSGCKL-GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWN 245

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGL----DADVMIIGSVL-MACSGLKC-MSQTKEIH 385
           +II+ Y++    + A +LF ++Q EGL      +    GS++  ACS +   +   +++ 
Sbjct: 246 SIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQML 305

Query: 386 GYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
             + + G L DL + +A+V  + + G  D ++N+FE +  ++VVS   ++   V      
Sbjct: 306 ARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGE 365

Query: 445 EALELFYLMNE-ANVESDSITLVSALSAASSLSIL----KKGKELNGFIIRKGFNLEG-S 498
            A ++F+ M +   + SDS  ++  LSA S  S+L    +KG+E++  +IR G N    +
Sbjct: 366 AAAKVFHEMKDLVGINSDSYVVL--LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVA 423

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           + + LV+MYA+ GA+  A  VF  +  KD + W S+I+    +   + A + F++M    
Sbjct: 424 IGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTG 483

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
             P + T ++ L +C+  G I  G    E + CD
Sbjct: 484 SMPSNFTLISTLSSCASLGWIMLG----EQIHCD 513



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 174/346 (50%), Gaps = 29/346 (8%)

Query: 263 CTVNAVSASGRLGNLLN----------GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           C     S+S    +L+N           +ELH  +IK GFV +L + NTL+++Y +   +
Sbjct: 63  CNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDL 122

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
               ++F +M+ ++ ++W  +I+GY QN    +A   FR +   G   +    GS L AC
Sbjct: 123 GSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 182

Query: 373 --SGLKCMSQTKEIHGYI--IRKGLSDLVILNAIVDVYGKC-GNIDYSRNVFESIESKDV 427
             SG        +IHG I   R G SD+V+ N ++ +YG C  + + +R+VF+ I  ++ 
Sbjct: 183 QESGPSGCKLGVQIHGLISKTRYG-SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNS 241

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANV----ESDSITLVSALSAASS-----LSIL 478
           +SW S+IS Y   G A  A +LF  M +  +    + +  T  S ++ A S     L +L
Sbjct: 242 ISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVL 301

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
              +++   + + GF  +  V+S+LV  +AR G  D A  +F  +  ++++    ++   
Sbjct: 302 ---EQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGL 358

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
               +G+ A  +F++M+ +    +  +++ LL A S   ++ EG++
Sbjct: 359 VKQKQGEAAAKVFHEMK-DLVGINSDSYVVLLSAFSEFSVLEEGRR 403


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/804 (32%), Positives = 423/804 (52%), Gaps = 78/804 (9%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG- 155
           N ++  YAK      A +LF RM  + DV  WN+I+S Y  SGQ L AL +F  M++ G 
Sbjct: 96  NIMMNGYAKLGSLSDAVELFGRMPTR-DVASWNTIMSGYYQSGQFLNALDIFVSMRQTGD 154

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
            + NA+TF   +++C    +  + +++     K        V  AL+ M  RCG M  A+
Sbjct: 155 SLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFAS 214

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR------------------------- 250
               +++N   +  NSML G+ ++     A++ F+                         
Sbjct: 215 KQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVRE 274

Query: 251 ------ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
                 ++ G G +PD     ++++A  RL +L  GK+LH   I+     D  + + +++
Sbjct: 275 ALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVE 334

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +YAKC C     RVF  +  ++ +SWT +I G+ Q  C  +++ELF  ++ E +  D   
Sbjct: 335 LYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFA 394

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIE 423
           + +++  C     +    ++H   ++ G +  V++ N+++ +Y KCGN+  +  +F  + 
Sbjct: 395 LATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMA 454

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFY-------------------------------- 451
            +D+VSWT MI++Y   G   +A E F                                 
Sbjct: 455 ERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSD 514

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           ++ E +V  D +T V+     + +   K G ++ G  ++ G  L+ SV ++++ MY++CG
Sbjct: 515 MLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCG 574

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            +  A K F+ +  KDL+ W +MI     HG GK AI++F  +  +   PD+I+++A+L 
Sbjct: 575 RISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLS 634

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
            CSHSGL+ EGK + ++M+ D+ + P  EH++C+VDLLGRA HL EA   +  M ++PTA
Sbjct: 635 GCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTA 694

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
           EVW ALL AC+ H N +L E+ AK L +LD    G Y+L++ ++A + K  D  QVR  M
Sbjct: 695 EVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLM 754

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           R  G+KK+PG SW+E+ N++H F A D SH +   I +KL E+ EK+    GYV      
Sbjct: 755 RDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHL-GYV------ 807

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
                  E  +    HSE+LA+A+G++       I I KNLR+C DCH+  KL+S +  R
Sbjct: 808 -----RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDR 862

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E V+RD  RFHHF+ G CSC DYW
Sbjct: 863 EFVIRDGVRFHHFKGGSCSCMDYW 886



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 175/657 (26%), Positives = 318/657 (48%), Gaps = 71/657 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFT 60
           Y K GS+ DA +LF ++  R V +WN ++  Y  +G+ L  L+ +  MR  G S+ +AFT
Sbjct: 102 YAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFT 161

Query: 61  FPCVIKACAML-------------------KDLDCGAKIHGLVLKCG------------Y 89
           F CV+K+C  L                    D D    +  ++++CG             
Sbjct: 162 FGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIK 221

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           + T    NS++  YAK +    A ++F  M E+ DVV WN +ISA S SG+  EAL +  
Sbjct: 222 NPTIICRNSMLVGYAKSHGVDHALEIFKSMPER-DVVSWNMVISALSKSGRVREALDMVV 280

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +M   G+  ++ T+ ++L AC   S    G ++H   +++  ++  YVA+A++ +YA+CG
Sbjct: 281 DMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCG 340

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
              EA  V   L +++SVSW  ++ GF+Q   + ++++ F +++      DQ      +S
Sbjct: 341 CFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLIS 400

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
                 ++  G +LH+  +K G    + + N+L+ MYAKC  +     +F  M  +D +S
Sbjct: 401 GCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVS 460

Query: 330 WTTIIAGYAQNNCHLKALELF-----RTV---------------QLEGLD---------- 359
           WT +I  Y+Q     KA E F     R V               + +GL           
Sbjct: 461 WTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKD 520

Query: 360 --ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
              D +   ++   C+ +       +I G+ ++ GL  D  ++NA++ +Y KCG I  +R
Sbjct: 521 VIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEAR 580

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
             F+ +  KD+VSW +MI+ Y  +G+  +A+E+F  +     + D I+ V+ LS  S   
Sbjct: 581 KAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSG 640

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTS 533
           ++++GK     ++++  N+   +   S +VD+  R G L  A  + + +  K    +W +
Sbjct: 641 LVEEGK-FYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGA 699

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           +++A   HG   +A +L  K   +  +P    ++ L    + +G  ++  +  ++MR
Sbjct: 700 LLSACKTHGNNDLA-ELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMR 755



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 173/362 (47%), Gaps = 45/362 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG   +A+++F  +  R   +W  ++G ++  G     +E +++MR   ++VD F 
Sbjct: 335 LYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFA 394

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I  C    D+  G+++H L LK G+     + NSL++MYAKC + + A  +F+ M 
Sbjct: 395 LATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMA 454

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-----NAY-------------- 161
           E+ D+V W  +I+AYS  G   +A   F +M    ++T      AY              
Sbjct: 455 ER-DIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYS 513

Query: 162 -------------TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
                        T+V   + C D     LG +I   TVK G  L   V NA+I MY++C
Sbjct: 514 DMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKC 573

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G+++EA      L  KD VSWN+M+TG+ Q+ +  +A++ F ++   G KPD +  V  +
Sbjct: 574 GRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVL 633

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDL--QIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
           S     G +  GK          F  D+  +  N    +    C V+ +GR  + + A++
Sbjct: 634 SGCSHSGLVEEGK----------FYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKN 683

Query: 327 FI 328
            I
Sbjct: 684 LI 685



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/497 (23%), Positives = 208/497 (41%), Gaps = 69/497 (13%)

Query: 166 ALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY------ 219
           AL++C   S  T    +H+  +  G    V++ N L+  Y  CG +++A  +L       
Sbjct: 31  ALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEP 90

Query: 220 --------------------------QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
                                     ++  +D  SWN++++G+ Q+  +  A+  F  ++
Sbjct: 91  NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150

Query: 254 GAGQKPDQVCTVNAVSAS-GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
             G       T   V  S G LG      +L     K     D  +   L+DM  +C  +
Sbjct: 151 QTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAM 210

Query: 313 NYMGR-------------------------------VFYQMTAQDFISWTTIIAGYAQNN 341
           ++  +                               +F  M  +D +SW  +I+  +++ 
Sbjct: 211 DFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSG 270

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILN 400
              +AL++   +  +G+  D     S L AC+ L  +   K++H  +IR     D  + +
Sbjct: 271 RVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVAS 330

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A+V++Y KCG    ++ VF S+  ++ VSWT +I  ++  G  +E++ELF  M    +  
Sbjct: 331 AMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAV 390

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D   L + +S   +   +  G +L+   ++ G      V++SL+ MYA+CG L  A  +F
Sbjct: 391 DQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIF 450

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
           N +  +D++ WT MI A    G    A + F  M   +     IT+ A+L A    G   
Sbjct: 451 NFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNV----ITWNAMLGAYIQHGAEE 506

Query: 581 EGKKFLEIMRCDYQLDP 597
           +G K    M  +  + P
Sbjct: 507 DGLKMYSDMLTEKDVIP 523



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 70/142 (49%), Gaps = 3/142 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A + FD +S++ + +WNAM+  Y  +G   + +E +  +   G   D  +
Sbjct: 569 MYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYIS 628

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI--VNSLVAMYAKCYDFRKARQLFDR 118
           +  V+  C+    ++ G K +  ++K  ++ +  +   + +V +  +     +A+ L D 
Sbjct: 629 YVAVLSGCSHSGLVEEG-KFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDE 687

Query: 119 MGEKEDVVLWNSIISAYSASGQ 140
           M  K    +W +++SA    G 
Sbjct: 688 MPMKPTAEVWGALLSACKTHGN 709


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/742 (33%), Positives = 421/742 (56%), Gaps = 4/742 (0%)

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
           +N +++ + K     KAR+LFD M E+   V W  +I  Y  S Q  EA  L+ +M+R G
Sbjct: 77  LNMMISGHLKFGKLSKARELFDGMVERT-AVSWTILIGGYLQSNQSKEAFRLYADMRRGG 135

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           +  +  T V  L    +   + + ++IH   +K G    + V N+L+  Y +   +  A+
Sbjct: 136 IEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLAS 195

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            +   + NKD+V++NS++TG+    L  +A++ F EL  +G KP        +SA+  L 
Sbjct: 196 QLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLD 255

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +   G+++H + +K  FV ++ +GN L+D Y+K   V+ +G++FY+M   D IS+  +I 
Sbjct: 256 DTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVIT 315

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
            YA N    ++ +LFR +Q    D       ++L   +    +   ++IH   I  G + 
Sbjct: 316 SYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANF 375

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           +  + NA+VD+Y KC     ++ +F++I  K  V WT+MIS+YV  G   E + +F  M 
Sbjct: 376 ESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMR 435

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              V +D  T  S L A ++L+ +  G++L+  +IR GF       S+L+D YA+CG + 
Sbjct: 436 RTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMT 495

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A K F  +  ++ + W ++I+A   +G     ++ F +M    + PD ++FL++L ACS
Sbjct: 496 DAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           H G + E       M   Y++ P  EHY  +VD+L R    +EA + +  M  EP+  +W
Sbjct: 556 HCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMW 615

Query: 635 CALLGACRVHSNKELGEIVAKKLLEL-DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
            ++L +CR+H N EL +  A +L  + D  +   Y+ +SN++A + +W +V +V+  MR 
Sbjct: 616 SSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRD 675

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            G++K P  SW+EI ++ H F A DKSH E  +I +K+  +++++E++ GY   T   LH
Sbjct: 676 RGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKK-GYKPDTTCALH 734

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +V+E  K++ L  HSER AIA+ ++ + +GS I + KNLR C DCH+  K++S++  RE+
Sbjct: 735 DVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREI 794

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           +VRD++RFHHF+ GVCSCGDYW
Sbjct: 795 IVRDSSRFHHFKDGVCSCGDYW 816



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 275/558 (49%), Gaps = 7/558 (1%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           K G +  A +LFD + +RT  +W  ++G Y+ + +       Y+ MR  GI  D  T   
Sbjct: 86  KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVT 145

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++     L+  +   +IH  V+K GY+    + NSLV  Y K +    A QLF  M  K 
Sbjct: 146 LLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK- 204

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D V +NS+++ YS  G   EA+ LF E+   G+  + +TF A L A         G ++H
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVH 264

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              +K+     V+V NAL+  Y++  ++ E   + Y++   D +S+N ++T +  N  + 
Sbjct: 265 GFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFK 324

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           ++   FR+LQ       Q      +S +    NL  G+++H  AI  G   + ++ N L+
Sbjct: 325 ESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALV 384

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMYAKC       ++F  +  +  + WT +I+ Y Q   H + + +F  ++  G+ AD  
Sbjct: 385 DMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQA 444

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
              S+L AC+ L  +S  +++H  +IR G +S++   +A++D Y KCG +  +   F  +
Sbjct: 445 TFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEM 504

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             ++ VSW ++IS+Y  NG  +  L  F  M ++  + DS++ +S LSA S    +++  
Sbjct: 505 PERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEAL 564

Query: 483 -ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGL 540
              N          +    +S+VD+  R G  D A K+   +      I+W+S++N+  +
Sbjct: 565 WHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRI 624

Query: 541 HGR---GKVAIDLFYKME 555
           H      K A D  + ME
Sbjct: 625 HKNHELAKKAADRLFNME 642



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 235/522 (45%), Gaps = 41/522 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K   +  A QLF  +  +   T+N+++  Y + G     +E +  +   GI    FTF
Sbjct: 185 YCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTF 244

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ A   L D   G ++HG VLK  +    F+ N+L+  Y+K     +  +LF  M E
Sbjct: 245 AALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPE 304

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D + +N +I++Y+ +GQ  E+  LFR++Q        + F   L     S    +G +
Sbjct: 305 L-DGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQ 363

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   +  G N +  V NAL+ MYA+C    EA  +   +  K +V W +M++ +VQ   
Sbjct: 364 IHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGK 423

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           + + +  F +++  G   DQ    + + A   L ++  G++LH+  I+ GF+S++  G+ 
Sbjct: 424 HEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSA 483

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+D YAKC C+    + F +M  ++ +SW  +I+ YAQN      L  F+ +   G   D
Sbjct: 484 LLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPD 543

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES 421
            +   SVL ACS           H   + + L     +  I +V  K  +          
Sbjct: 544 SVSFLSVLSACS-----------HCGFVEEALWHFNSMTQIYEVTPKREH---------- 582

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
                   +TSM+     NG  +EA +   LM E   E   I   S L++      + K 
Sbjct: 583 --------YTSMVDVLCRNGRFDEAEK---LMTEMPFEPSEIMWSSVLNSCR----IHKN 627

Query: 482 KELNGFIIRKGFNLE----GSVASSLVDMYARCGALDIANKV 519
            EL      + FN+E     +   ++ ++YA  G  D   KV
Sbjct: 628 HELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKV 669



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 189/397 (47%), Gaps = 37/397 (9%)

Query: 278 LNGKEL-HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI-------- 328
           LN   L  A+ +K GF  +    N  ++ + +   + +  +VF QM A++ I        
Sbjct: 24  LNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISG 83

Query: 329 -----------------------SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
                                  SWT +I GY Q+N   +A  L+  ++  G++ D + +
Sbjct: 84  HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIES 424
            ++L     L+  +   +IH ++I+ G   +L++ N++VD Y K   +  +  +F+ + +
Sbjct: 144 VTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN 203

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           KD V++ S+++ Y + GL  EA+ELF  ++ + ++    T  + LSAA  L   K G+++
Sbjct: 204 KDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQV 263

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +GF+++  F     V ++L+D Y++   +D   K+F  +   D I +  +I +   +G+ 
Sbjct: 264 HGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQF 323

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYA 603
           K + DLF K++   F      F  LL   + S  +  G++   + +      +   E+  
Sbjct: 324 KESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN-- 381

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            LVD+  + N  +EA +   ++  + T   W A++ A
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTVP-WTAMISA 417



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 124/243 (51%), Gaps = 15/243 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC    +A+++FD ++ ++   W AM+ AYV  G+    +  +S MR  G+  D  T
Sbjct: 386 MYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQAT 445

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +++ACA L  +  G ++H L+++ G+ S  +  ++L+  YAKC     A + F  M 
Sbjct: 446 FASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP 505

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+  V  WN++ISAY+ +G     L  F++M + G   ++ +F++ L AC    F    +
Sbjct: 506 ERNSVS-WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEAL 564

Query: 181 -------EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS-VSWNSM 232
                  +I+  T K           +++ +  R G+  EA  ++ ++  + S + W+S+
Sbjct: 565 WHFNSMTQIYEVTPKREH------YTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSV 618

Query: 233 LTG 235
           L  
Sbjct: 619 LNS 621


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 291/861 (33%), Positives = 456/861 (52%), Gaps = 38/861 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC S+ DA   F  +  R + TWN ++ A  S   P  V + Y+RM+   +   A  
Sbjct: 68  MYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSS---PAAVFDLYTRMK---LEERAEN 121

Query: 61  FPCVIKACAMLKDLDCGAK------------IHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
            P  +   A+L  +  G              +H  +     +   F+  +L+  Y KC  
Sbjct: 122 RPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGC 181

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE-ALGLFREMQRVGLVTNAYTFVAAL 167
              A ++F R+ +  D++ WN+ I A + + +  + AL L R M   GL+ N  +FVA L
Sbjct: 182 VESALEVFSRI-QVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAIL 240

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
            +C D S   L   IHA   + G    V VA AL+ MY RCG + E+  V   +  ++ V
Sbjct: 241 SSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHV 300

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA--SGRLGNLLNGKELHA 285
           SWN+M+  F Q      A   +  +Q  G +P+++  V A+ A  S    +L     LH 
Sbjct: 301 SWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHG 360

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
           +    G   D+ +G  L+ MY     ++     F  + A++ +SW  ++  Y  N    +
Sbjct: 361 WIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRARE 420

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIV 403
           A+ELF  ++ + L  + +   +VL  C  +   S+ + IH  ++  GL   +  I N +V
Sbjct: 421 AMELFAAMKRQSLAPNKVSYLAVLGCCEDV---SEARSIHAEVVGNGLFAQESSIANGVV 477

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
            ++ + G+++ +   F++   KD VSW + +++       + A+  FY M       D  
Sbjct: 478 RMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKF 537

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGA-LDIANKVF 520
           TLVS +   + L  L+ G+ +    +     +E  V   S++++M A+CG+ +D   ++F
Sbjct: 538 TLVSVVDVCADLGTLELGRSIQQ-QLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLF 596

Query: 521 NCV--QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSG 577
             +    KDL+ W +MI A   HG G+ A+ LF  M+  S   PD  TF+++L  CSH+G
Sbjct: 597 ARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAG 656

Query: 578 LINEGKKFLEIMRCDYQLDPWP-EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           L+ +G     + R    ++  P EHYACLVD+LGR  +L EA  F+R M +   + VW +
Sbjct: 657 LVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTS 716

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LLGAC  + + E GE  A+  +EL   +   YV++SN++AA+ +W+D  +VR  M    +
Sbjct: 717 LLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRV 776

Query: 697 KK-TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           KK  PG S I + N++H F ARD+SH +SDEIY +L E  + L RE GYV  T+ VLH+V
Sbjct: 777 KKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAEL-ERLKGLIREAGYVPDTRLVLHDV 835

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           EEE+K Q+L+ HSE+LAIA+G++       IR+ KNLRVC DCH+  K ++R+  RE+ V
Sbjct: 836 EEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAV 895

Query: 816 RDANRFHHF-EAGVCSCGDYW 835
           RD NRFHHF + G CSCGDYW
Sbjct: 896 RDCNRFHHFGKDGECSCGDYW 916



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 261/541 (48%), Gaps = 23/541 (4%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   +++ C    DL  G ++H  ++K G    D + N LV MY+KC     A   F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS----- 174
             +  +  WN++I+A S+     +     +  +R     N  T +A L A          
Sbjct: 86  RSR-GIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSS 144

Query: 175 -FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                   +H     S     ++VA AL+  Y +CG +  A  V  +++  D + WN+ +
Sbjct: 145 SSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAI 204

Query: 234 TGFVQNDLYC-KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
                ND    +A+   R +   G  P++   V  +S+ G   +L   + +HA   + GF
Sbjct: 205 MACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGF 264

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
           + D+ +   L+ MY +C  V+    VF  M  ++ +SW  +IA +AQ      A  ++  
Sbjct: 265 LGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWR 324

Query: 353 VQLEGLDAD-VMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
           +Q EG   + +  + ++  AC S  + + ++  +HG+I   GL  D+++  A+V +YG  
Sbjct: 325 MQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGST 384

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G ID +R  F++I +K++VSW +M+++Y  NG A EA+ELF  M   ++  + ++ ++ L
Sbjct: 385 GAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL 444

Query: 470 SAASSLSILKKGKELNGFIIRKG-FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
                +S   + + ++  ++  G F  E S+A+ +V M+AR G+L+ A   F+    KD 
Sbjct: 445 GCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDS 501

Query: 529 ILWTSMINA----NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           + W + + A      LHG    AI  FY M+ E F PD  T ++++  C+  G +  G+ 
Sbjct: 502 VSWNTKVAALSAREDLHG----AITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRS 557

Query: 585 F 585
            
Sbjct: 558 I 558



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 28/180 (15%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L +G++L+  I+++G      + + LV MY++C +LD AN  F+ ++++ +  W ++I A
Sbjct: 40  LAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAA 99

Query: 538 NGLHGRGKVAIDLFYKMEAESFA---PDHITFLALLYACSHSGLINEGKKFL-------- 586
                      DL+ +M+ E  A   P+ +T +A+L      G I  G            
Sbjct: 100 ---QSSPAAVFDLYTRMKLEERAENRPNRLTIIAVL------GAIASGDPSSSSSSRAQA 150

Query: 587 -----EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
                +I   D + D +      L+D  G+   +E A +    +Q+ P    W A + AC
Sbjct: 151 RIVHDDIRGSDLERDLFVA--TALLDAYGKCGCVESALEVFSRIQV-PDLICWNAAIMAC 207


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 274/845 (32%), Positives = 459/845 (54%), Gaps = 31/845 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + DA ++F+ +    VF+W A++ AY   G    VL  + +M++ G   DAF 
Sbjct: 70  MYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFV 129

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC+    L+ G  IH   +  G + T  + N++V +Y KC    +A+ +F+R+ 
Sbjct: 130 FSTVLTACSSAGALNEGKAIHDCAVLAGME-TQVVGNAIVNLYGKCGRVHEAKAVFERLP 188

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
           E+ ++V WN++I+A + +G C +A+ +F  M   G V  N  TFV+ + AC +      G
Sbjct: 189 ER-NLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRG 247

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
              H   +++G +  ++V N+L+ MY +CG +  A  V  ++ +++ VSW  M+  + Q 
Sbjct: 248 KSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQ 307

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A   ++ +     +P+ V  +  + +  R  +L   +++HA+ +  GF SD  + 
Sbjct: 308 GFIRAAFDLYKRMDC---EPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQ 364

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMT--AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
             L+ MY KC  V+    +F  +   + + ++W  +I+G AQ+    +ALE F  ++LEG
Sbjct: 365 VCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEG 424

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
           +  + +   + L ACS L  +++ +++H  I+ + + +  + NA++++YGKCG++D + +
Sbjct: 425 VRPNSVTYLASLEACSSLNDLTRGRQLHARILLENIHEANLSNAVINMYGKCGSLDEAMD 484

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            F  +  +DVVSW +MI++Y  +G   +ALE F  M+     +D  T + A+ A  S+  
Sbjct: 485 EFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPS 544

Query: 478 LKKGKELNGFIIRKGFNLE--GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           L  GK ++  +      LE    VA++LV MYARCG+L  A  VF    +++L+ W+++I
Sbjct: 545 LALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLI 604

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
            A   HGR   A+DLF +M+ +   PD +TF  L+ ACS  G++ +G  +   M  DY +
Sbjct: 605 AACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSI 664

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
               +H+  +VDLLGRA  LEEA Q +R     P A     LLGAC VH + E G  +A+
Sbjct: 665 PASEDHFGGMVDLLGRAGWLEEAEQVMRK---NPCALAHAVLLGACHVHGDVERGIRIAQ 721

Query: 656 KLLELDPGNPGNY----VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS-SWIEIGNK 710
             LELD  N  ++     +++ ++ A+ +W+D  +VR  +     ++ PG  SWIE+ N+
Sbjct: 722 SALELDWKNSASFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVKNR 781

Query: 711 IHSFIARDK--SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQML-YGH 767
           +H F   D        D+I  +L  ++     EGG            +E  +  +L   H
Sbjct: 782 VHEFGEDDDRLQGPRLDKIRGELQRLSSLAVEEGGICK---------DENARAHILGCCH 832

Query: 768 SERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA- 826
           SE++AI +G++ +  G LIRI KNLR C DCH+F K VSR   RE+ VRD    H F+  
Sbjct: 833 SEKVAIGFGIVSTPAGQLIRIVKNLRACHDCHAFAKFVSRRIQREISVRDPYGLHCFQTN 892

Query: 827 GVCSC 831
           G CSC
Sbjct: 893 GSCSC 897



 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 193/633 (30%), Positives = 331/633 (52%), Gaps = 17/633 (2%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
           S+    +  +++ C   K    G  +H  +L  G     +I N L+ MYAKC     A +
Sbjct: 23  SLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALE 82

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           +F+ +    +V  W ++I+AY+  G   E LGLFR+MQ  G   +A+ F   L AC  + 
Sbjct: 83  VFELL-PNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAG 141

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  IH   V +G   QV V NA++ +Y +CG++ EA  V  +L  ++ VSWN+++ 
Sbjct: 142 ALNEGKAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIA 200

Query: 235 GFVQNDLYCK-AMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
              QN  +CK AMQ F  +   G  +P+    V+ V A   L +L  GK  H   I+ GF
Sbjct: 201 ANAQNG-HCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGF 259

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            S L +GN+L++MY KC  V+    VF +M++++ +SWT +I  YAQ      A +L++ 
Sbjct: 260 DSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKR 319

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGN 411
           +  E    + +   +V+ +C   + + + ++IH +++  G  SD V+   +V +YGKCG+
Sbjct: 320 MDCE---PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGS 376

Query: 412 IDYSRNVFESIE--SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           +D + ++FE+++  S + V+W +MIS    +G + +ALE F+ M    V  +S+T +++L
Sbjct: 377 VDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASL 436

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
            A SSL+ L +G++L+  I+ +  + E ++++++++MY +CG+LD A   F  +  +D++
Sbjct: 437 EACSSLNDLTRGRQLHARILLENIH-EANLSNAVINMYGKCGSLDEAMDEFAKMPERDVV 495

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            W +MI     HG G+ A++ F +M+ E +  D  T+L  + AC     +  GK    I+
Sbjct: 496 SWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIV 555

Query: 590 RCDYQ-LDPWPEHYACLVDLLGRANHLEEAYQ-FVRSMQIEPTAEVWCALLGACRVHSNK 647
                 L+  P     LV +  R   L +A   F RS         W  L+ AC  H  +
Sbjct: 556 ATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLV--TWSNLIAACAQH-GR 612

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
           E   +   + ++L    P      + V A SR+
Sbjct: 613 ENEALDLFREMQLQGTKPDALTFSTLVAACSRR 645


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/563 (42%), Positives = 368/563 (65%), Gaps = 4/563 (0%)

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G+LL+GK++H   +K GF  D+ +  +L+ MY++   V    ++F  M A+D  SW  +I
Sbjct: 8   GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMI 67

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           +GY QN    +AL++   ++LEG+  D + + SVL  C+ +  +   K IH Y+I+ GL 
Sbjct: 68  SGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLE 127

Query: 395 -DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
            +L + NA++++Y K G++ +++ VF  +  KDVVSW ++I+ Y  NGLA+EA+E++ LM
Sbjct: 128 FELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLM 186

Query: 454 NE-ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
            E   +  +  T VS L A S +  L++G  ++G +I+     +  V + L+DMY +CG 
Sbjct: 187 EEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGK 246

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           LD A  +F  V  K+ + W +MI+  G+HG G+ A++LF +M+AE   PDHITF++LL A
Sbjct: 247 LDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSA 306

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CSHSGL+++ +    +M  +Y + P  +HY C+VDL GRA  LE A+ F++ M I+P A 
Sbjct: 307 CSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDAS 366

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
            W ALL ACR+H N ELG+  +++L E+D  N G YVL+SN++A   KW+ V+ VR   R
Sbjct: 367 AWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLAR 426

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
             GL+K PG S I + NK+  F   +++H + +EIY++L ++T K+ +  GYV    FVL
Sbjct: 427 DRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKI-KTIGYVPDFCFVL 485

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
            +VEE+EK  +L GHSERLAIAYG++ ++  + IRI KNLRVC DCH+  K +S +  RE
Sbjct: 486 QDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITERE 545

Query: 813 LVVRDANRFHHFEAGVCSCGDYW 835
           ++VRD++RFHHF+ G CSCGDYW
Sbjct: 546 IIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 222/405 (54%), Gaps = 18/405 (4%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G +IH   +K G    V+VA +L+ MY+R G + +A  +   +  +D  SWN+M++G+ Q
Sbjct: 13  GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQ 72

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N    +A+    E++  G K D +   + +    ++G++L+GK +H Y IK G   +L +
Sbjct: 73  NGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFV 132

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV-QLEG 357
            N L++MYAK   + +  +VF  +  +D +SW T+I GYAQN    +A+E++  + + E 
Sbjct: 133 SNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEE 191

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +  +     S+L A S +  + Q   IHG +I+  L SD+ +   ++D+YGKCG +D + 
Sbjct: 192 IIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAI 251

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           ++F  +  K+ V W +MIS Y  +G   +ALELF  M    V+ D IT VS LSA S   
Sbjct: 252 SLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSG 311

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQT----KDLIL 530
           ++   +     ++ + + ++ S+     +VD++ R G L++A   FN ++      D   
Sbjct: 312 LVSDAQWCFN-MMEEEYGIKPSLKHYGCMVDLFGRAGELEMA---FNFIKKMPIQPDASA 367

Query: 531 WTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           W +++NA  +HG    GK A +  +++++E+    +   L+ +YA
Sbjct: 368 WGALLNACRIHGNIELGKHASERLFEVDSENVG--YYVLLSNIYA 410



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/409 (32%), Positives = 214/409 (52%), Gaps = 22/409 (5%)

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+KAC  L D   G KIH LVLK G++   F+  SLV MY++      AR+LFD M  
Sbjct: 1   PPVVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D   WN++IS Y  +G   EAL +  EM+  G+  +A T  + L  C        G  
Sbjct: 58  R-DRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKL 116

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   +K G   +++V+NALI MYA+ G +  A  V + L  KD VSWN+++TG+ QN L
Sbjct: 117 IHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKV-FGLLIKDVVSWNTLITGYAQNGL 175

Query: 242 YCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             +A++ +  ++   +  P+Q   V+ + A   +G L  G  +H   IK    SD+ +G 
Sbjct: 176 ASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGT 235

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY KC  ++    +FYQ+  ++ + W  +I+ Y  +    KALELFR ++ E +  
Sbjct: 236 CLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKP 295

Query: 361 DVMIIGSVLMAC--SGLK-----CMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           D +   S+L AC  SGL      C +  +E +G  I+  L        +VD++G+ G ++
Sbjct: 296 DHITFVSLLSACSHSGLVSDAQWCFNMMEEEYG--IKPSLKH---YGCMVDLFGRAGELE 350

Query: 414 YSRNVFESIE-SKDVVSWTSMISSYVHNG---LANEALELFYLMNEANV 458
            + N  + +    D  +W +++++   +G   L   A E  + ++  NV
Sbjct: 351 MAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENV 399



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 150/276 (54%), Gaps = 3/276 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + G V DA +LFD +  R   +WNAM+  Y  NG     L+    MR+ G+ +DA T
Sbjct: 38  MYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAIT 97

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+  CA + D+  G  IH  V+K G +   F+ N+L+ MYAK      A+++F  + 
Sbjct: 98  VASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL- 156

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLG 179
             +DVV WN++I+ Y+ +G   EA+ ++  M +   ++ N  T+V+ L A         G
Sbjct: 157 -IKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQG 215

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           M IH   +K+     V+V   LI MY +CGK+ +A  + YQ+  K+SV WN+M++ +  +
Sbjct: 216 MRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVH 275

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
               KA++ FRE++    KPD +  V+ +SA    G
Sbjct: 276 GDGEKALELFREMKAERVKPDHITFVSLLSACSHSG 311


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/642 (38%), Positives = 392/642 (61%), Gaps = 6/642 (0%)

Query: 199 NALIAMYARCGKMT--EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE-LQGA 255
           N LIA     G +    A  V       D ++WNSML  FV +++  +A+Q + E L+ +
Sbjct: 14  NKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
              PD+    + +     L     GK LH   +K    SDL I  TL++MYA C  +   
Sbjct: 74  RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
             +F +M  ++ + WT++I+GY +N+C  +AL L++ ++ +G   D + + +++ AC+ L
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAEL 193

Query: 376 KCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           K +    ++H +I    +    +L +A+V++Y KCG++  +R VF+ +  KDV +W+++I
Sbjct: 194 KDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALI 253

Query: 435 SSYVHNGLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
             YV N  + EAL+LF  +   +N+  + +T+++ +SA + L  L+ G+ ++ +I R   
Sbjct: 254 FGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK 313

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
               S+ +SL+DM+++CG +D A ++F+ +  KDLI W SM+N   LHG G+ A+  F  
Sbjct: 314 GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRL 373

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           M+     PD ITF+ +L ACSH+GL+ EGKK    +   Y +    EHY C+VDLL RA 
Sbjct: 374 MQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAG 433

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISN 673
            L EA +F+R M ++P   +W ++LGACRV++N ELGE  A+ LL+L+P N G Y+L+SN
Sbjct: 434 LLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSN 493

Query: 674 VFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
           ++A  + W +V++VR  M   G++KTPG S + I N  HSF+A D SH E  EI   L +
Sbjct: 494 IYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQ 553

Query: 734 ITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLR 793
           + EKL +  GYVA T  VL N+++ +K + +  HSE+LA+ YG+LKS  G  I I KNLR
Sbjct: 554 VREKL-KLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLR 612

Query: 794 VCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           VC DCH+  KLVS+++ R++ +RD NRFHHF+ G CSC DYW
Sbjct: 613 VCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/510 (29%), Positives = 262/510 (51%), Gaps = 21/510 (4%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFTFPCVIKACA 69
           A  +F    +  V TWN+ML A+V++  P R L++Y+ M     +V D FTFP ++K CA
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
           +L +   G  +HG V+K    S  +I  +L+ MYA C D + AR LF+RMG +  VV W 
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV-WT 149

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           S+IS Y  +    EAL L+++M+  G   +  T    + AC +     +GM++H+   + 
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
              +   + +AL+ MYA+CG +  A  V  +L +KD  +W++++ G+V+N+   +A+Q F
Sbjct: 210 DMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLF 269

Query: 250 RELQ-GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           RE+  G+  +P++V  +  +SA  +LG+L  G+ +H Y  +      + + N+L+DM++K
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSK 329

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  ++   R+F  M+ +D ISW +++ G+A +    +AL  FR +Q   L  D +    V
Sbjct: 330 CGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGV 389

Query: 369 LMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES 421
           L ACS       G K   + + ++G  ++           +VD+  + G +  +R     
Sbjct: 390 LTACSHAGLVQEGKKLFYEIEALYGVRLKSEH-----YGCMVDLLCRAGLLAEAREFIRV 444

Query: 422 IE-SKDVVSWTSMISS-YVHNGLA-NEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           +    D   W SM+ +  V+N L   E    F L  E   +   I L +  +     + +
Sbjct: 445 MPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEV 504

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           KK +EL   +  KG       +S ++D  A
Sbjct: 505 KKVREL---MNEKGIQKTPGCSSVVIDNIA 531



 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 252/475 (53%), Gaps = 14/475 (2%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
           DV+ WNS++ A+  S     AL  + EM +R   V + +TF + L+ C       +G  +
Sbjct: 42  DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H   VK   +  +Y+   L+ MYA CG +  A  +  ++ +++ V W SM++G+++N   
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A+  +++++  G  PD+V     VSA   L +L  G +LH++  +        +G+ L
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-LEGLDAD 361
           ++MYAKC  +    +VF +++ +D  +W+ +I GY +NN   +AL+LFR V     +  +
Sbjct: 222 VNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFE 420
            + I +V+ AC+ L  +   + +H YI R      V L N+++D++ KCG+ID ++ +F+
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFD 341

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
           S+  KD++SW SM++ +  +GL  EAL  F LM   +++ D IT +  L+A S   ++++
Sbjct: 342 SMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQE 401

Query: 481 GKELNGFI-IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINAN 538
           GK+L   I    G  L+      +VD+  R G L  A +    +  + D  +W SM+ A 
Sbjct: 402 GKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGAC 461

Query: 539 GLHGR---GKVAIDLFYKMEAESFAPDHI-TFLALLYACSHSGLINEGKKFLEIM 589
            ++     G+ A     K+E  +   D +   L+ +YA     + NE KK  E+M
Sbjct: 462 RVYNNLELGEEAARFLLKLEPTN---DGVYILLSNIYA--KRKMWNEVKKVRELM 511



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 148/284 (52%), Gaps = 2/284 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG +  A  LF+++  R    W +M+  Y+ N  P   L  Y +M   G S D  T
Sbjct: 123 MYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVT 182

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA LKDL  G K+H  + +        + ++LV MYAKC D + ARQ+FD++ 
Sbjct: 183 MATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLS 242

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLG 179
           +K DV  W+++I  Y  + +  EAL LFRE+     +  N  T +A + AC        G
Sbjct: 243 DK-DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETG 301

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H    ++ +   V + N+LI M+++CG +  A  +   +  KD +SWNSM+ GF  +
Sbjct: 302 RWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALH 361

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
            L  +A+  FR +Q    +PD++  +  ++A    G +  GK+L
Sbjct: 362 GLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKL 405


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/706 (35%), Positives = 407/706 (57%), Gaps = 4/706 (0%)

Query: 50  RVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDF 109
           R  G   + F    VI+AC  L  ++ GA++HG V++ G+D   ++  SL+  Y+K  B 
Sbjct: 29  RKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBI 88

Query: 110 RKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA 169
             AR +FD++ EK   V W +II+ Y+  G+   +L LF +M+   +V + Y   + L A
Sbjct: 89  EVARLVFDQLLEK-TAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSA 147

Query: 170 CEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
           C    F   G +IHA  ++ G  + V V N LI  Y +C ++     +  Q+  K+ +SW
Sbjct: 148 CSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISW 207

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
            +M++G++QN    +AM+ F E+   G KPD     + +++ G L  L  G+++HAY IK
Sbjct: 208 TTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIK 267

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
               S+  + N L+DMYAK   +    +VF  M  Q+ IS+  +I GY+      +ALEL
Sbjct: 268 ANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALEL 327

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGK 408
           F  +++      ++   S+L   + L  +  +K+IHG II+ G+S DL   +A++DVY K
Sbjct: 328 FHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSK 387

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           C  +  +R+VFE +  KD+V W +M   Y  +    EAL+L+  +  +  + +  T  + 
Sbjct: 388 CSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAAL 447

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           ++AAS+L+ L+ G++ +  +++ G +    V ++LVDMYA+CG+++ A K+FN    +D+
Sbjct: 448 ITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDV 507

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
           + W SMI+ +  HG  + A+ +F +M  E   P+++TF+A+L ACSH+G + +G      
Sbjct: 508 VCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNS 567

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           M   + + P  EHYAC+V LLGR+  L EA +F+  M IEP A VW +LL ACR+  N E
Sbjct: 568 MP-GFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVE 626

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
           LG+  A+  +  DP + G+Y+L+SN+FA+   W DV++VR RM  S + K PG SWIE+ 
Sbjct: 627 LGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVN 686

Query: 709 NKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           NK++ FIAR  +H E+D I   L  + + + +  GYV     +L N
Sbjct: 687 NKVNVFIARXTTHREADMIGSVLDILIQHI-KGAGYVPDATALLMN 731



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 168/558 (30%), Positives = 291/558 (52%), Gaps = 14/558 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +  A  +FD++ ++T  TW  ++  Y   G     LE +++MR   +  D +  
Sbjct: 82  YSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVV 141

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ AC+ML+ L+ G +IH  VL+ G +    +VN L+  Y KC   +  R+LFD+M  
Sbjct: 142 SSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVV 201

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL--G 179
           K +++ W ++IS Y  +    EA+ LF EM R+G   + +   + L +C   S E L  G
Sbjct: 202 K-NIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSC--GSLEALEQG 258

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++HA T+K+      +V N LI MYA+   + +A  V   +  ++ +S+N+M+ G+   
Sbjct: 259 RQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQ 318

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +   +A++ F E++     P  +  V+ +  S  L  L   K++H   IK G   DL  G
Sbjct: 319 EKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAG 378

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           + L+D+Y+KC  V     VF +M  +D + W  +  GY Q+  + +AL+L+ T+Q     
Sbjct: 379 SALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQK 438

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNV 418
            +     +++ A S L  +   ++ H  +++ GL     + NA+VD+Y KCG+I+ +R +
Sbjct: 439 PNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKM 498

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F S   +DVV W SMIS++  +G A EAL +F  M +  ++ + +T V+ LSA S    +
Sbjct: 499 FNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXV 558

Query: 479 KKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMI 535
           + G  LN F    GF ++      + +V +  R G L  A +    +  +   I+W S++
Sbjct: 559 EDG--LNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 616

Query: 536 NANGLHGR---GKVAIDL 550
           +A  + G    GK A ++
Sbjct: 617 SACRIAGNVELGKYAAEM 634



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 168/337 (49%), Gaps = 18/337 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   + DA+++FD ++++ V ++NAM+  Y S  +    LE +  MRV        T
Sbjct: 283 MYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLT 342

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++   A L  L+   +IHGL++K G     F  ++L+ +Y+KC   + AR +F+ M 
Sbjct: 343 FVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN 402

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK D+V+WN++   Y+   +  EAL L+  +Q      N +TF A + A  + +    G 
Sbjct: 403 EK-DIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQ 461

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   VK G +   +V NAL+ MYA+CG + EA  +      +D V WNSM++   Q+ 
Sbjct: 462 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 521

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG----KELHAYAIKQGFVSDL 296
              +A+  FRE+   G +P+ V  V  +SA    G + +G      +  + IK G     
Sbjct: 522 EAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPG----- 576

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
                  + YA  C V+ +GR      A++FI    I
Sbjct: 577 ------TEHYA--CVVSLLGRSGKLFEAKEFIEKMPI 605



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 124/236 (52%), Gaps = 2/236 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  V DA  +F++++++ +  WNAM   Y  + E    L+ YS ++      + FT
Sbjct: 384 VYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFT 443

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +I A + L  L  G + H  ++K G D   F+ N+LV MYAKC    +AR++F+   
Sbjct: 444 FAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSI 503

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV WNS+IS ++  G+  EALG+FREM + G+  N  TFVA L AC  +     G+
Sbjct: 504 WR-DVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGL 562

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
               +    G          ++++  R GK+ EA   + ++     ++ W S+L+ 
Sbjct: 563 NHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 618



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 82/145 (56%), Gaps = 1/145 (0%)

Query: 441 GLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           G + EAL +F  L  ++    +   L S + A + L +++KG +L+GF++R GF+ +  V
Sbjct: 15  GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            +SL+D Y++ G +++A  VF+ +  K  + WT++I      GR  V+++LF +M   + 
Sbjct: 75  GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134

Query: 560 APDHITFLALLYACSHSGLINEGKK 584
            PD     ++L ACS    +  GK+
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGGKQ 159


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/726 (34%), Positives = 429/726 (59%), Gaps = 20/726 (2%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A  +F++M    D  +WN II  Y+ +G   EA+  +  M+  G+ ++ +TF   ++AC 
Sbjct: 77  ALDMFEKMNH-SDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACG 135

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           +     +G ++H   +K G +L VYV N LI MY + G +  A  V  ++  +D VSWNS
Sbjct: 136 ELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNS 195

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M++G+  +     ++  F+E+   G K D+   ++A+ A      L +G E+H   I+  
Sbjct: 196 MVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSE 255

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
              D+ +  +L+DMY KC  V+Y  RVF ++ +++ ++W  +I G  ++           
Sbjct: 256 LELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQED----------- 304

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCG 410
               + +  DV+ + ++L +CS    + + K IHG+ IRK  L  LV+  A+VD+YGKCG
Sbjct: 305 ----DKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCG 360

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSAL 469
            +  + +VF  +  K++VSW +M+++YV N    EAL++F +++NE  ++ D+IT+ S L
Sbjct: 361 ELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEP-LKPDAITIASVL 419

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
            A + L+   +GK+++ +I++ G      +++++V MYA+CG L  A + F+ +  KD++
Sbjct: 420 PAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVV 479

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            W +MI A  +HG G+ +I  F +M  + F P+  TF++LL ACS SGLI+EG  F   M
Sbjct: 480 SWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSM 539

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
           + +Y +DP  EHY C++DLLGR  +L+EA  F+  M + PTA +W +LL A R H++  L
Sbjct: 540 KVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVL 599

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
            E+ A+ +L L   N G YVL+SN++A + +W+DV++++  M+  GL KT G S ++I  
Sbjct: 600 AELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDING 659

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           +  SFI +D+SH+ ++ IY  L  + +K+  +    + T+F   +V ++      Y HS 
Sbjct: 660 RSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPLDVAKKRGNSPEY-HSV 718

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           +LAI +G++ +  G+ + + KN R+C DCH   K +S++  RE+VV DA  FHHF  G C
Sbjct: 719 KLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQVTKREIVVGDAKVFHHFRDGCC 778

Query: 830 SCGDYW 835
           SC DYW
Sbjct: 779 SCRDYW 784



 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 184/545 (33%), Positives = 290/545 (53%), Gaps = 28/545 (5%)

Query: 3   GKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFP 62
           G  G+ LD   +F+K++    F WN ++  Y +NG     ++ Y RM   GI  D FTFP
Sbjct: 72  GLMGNALD---MFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFP 128

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
            VIKAC  L  L  G K+HG ++K G+D   ++ N L+ MY K      A ++FD M  +
Sbjct: 129 FVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVR 188

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D+V WNS++S Y   G  L +L  F+EM R+G   + +  ++AL AC        GMEI
Sbjct: 189 -DLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H   ++S   L + V  +LI MY +CGK+  A  V  ++ +K+ V+WN+M+ G  ++D  
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKV 307

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
                           PD +  +N + +  + G LL GK +H +AI++ F+  L +   L
Sbjct: 308 I---------------PDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETAL 352

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMY KC  +     VF QM  ++ +SW T++A Y QN  + +AL++F+ +  E L  D 
Sbjct: 353 VDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDA 412

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFES 421
           + I SVL A + L   S+ K+IH YI++ GL S+  I NAIV +Y KCG++  +R  F+ 
Sbjct: 413 ITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDG 472

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  KDVVSW +MI +Y  +G    +++ F  M     + +  T VS L+A S   ++ +G
Sbjct: 473 MVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEG 532

Query: 482 -KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI----LWTSMIN 536
               N   +  G +        ++D+  R G LD A K F  ++   L+    +W S++ 
Sbjct: 533 WGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEA-KCF--IEEMPLVPTARIWGSLLA 589

Query: 537 ANGLH 541
           A+  H
Sbjct: 590 ASRNH 594



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 201/381 (52%), Gaps = 16/381 (4%)

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           +   G M  A  +  ++ + D+  WN ++ G+  N L+ +A+ F+  ++  G + D    
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
              + A G L  L+ G+++H   IK GF  D+ + N L+DMY K   +    +VF +M  
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D +SW ++++GY  +   L +L  F+ +   G  AD   + S L ACS   C+    EI
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247

Query: 385 HGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           H  +IR  L  D+++  +++D+YGKCG +DY+  VF  I SK++V+W +MI         
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG------- 300

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
                   +  +  V  D IT+++ L + S    L +GK ++GF IRK F     + ++L
Sbjct: 301 --------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETAL 352

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           VDMY +CG L +A  VFN +  K+++ W +M+ A   + + K A+ +F  +  E   PD 
Sbjct: 353 VDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDA 412

Query: 564 ITFLALLYACSHSGLINEGKK 584
           IT  ++L A +     +EGK+
Sbjct: 413 ITIASVLPAVAELASRSEGKQ 433



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 230/482 (47%), Gaps = 30/482 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  AE++FD++  R + +WN+M+  Y  +G+ L  L  +  M  LG   D F 
Sbjct: 168 MYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFG 227

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + AC++   L  G +IH  V++   +    +  SL+ MY KC     A ++F+R+ 
Sbjct: 228 MISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIY 287

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K ++V WN++I             G  +E  +V  + +  T +  L +C  S     G 
Sbjct: 288 SK-NIVAWNAMI-------------GGMQEDDKV--IPDVITMINLLPSCSQSGALLEGK 331

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   ++      + +  AL+ MY +CG++  A  V  Q+  K+ VSWN+M+  +VQN+
Sbjct: 332 SIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNE 391

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            Y +A++ F+ +     KPD +   + + A   L +   GK++H+Y +K G  S+  I N
Sbjct: 392 QYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISN 451

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++ MYAKC  +      F  M  +D +SW T+I  YA +     +++ F  ++ +G   
Sbjct: 452 AIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKP 511

Query: 361 DVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           +     S+L ACS       G    +  K  +G  I  G+        ++D+ G+ GN+D
Sbjct: 512 NGSTFVSLLTACSISGLIDEGWGFFNSMKVEYG--IDPGIEH---YGCMLDLLGRNGNLD 566

Query: 414 YSRNVFESIESKDVVS-WTSMI-SSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
            ++   E +        W S++ +S  HN +    L   ++++  +  +    L+S + A
Sbjct: 567 EAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYA 626

Query: 472 AS 473
            +
Sbjct: 627 EA 628


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 269/746 (36%), Positives = 408/746 (54%), Gaps = 62/746 (8%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA----CEDSSFETLG 179
           D+V WN  ISAY   GQC  AL +F  M+R   VT        L      C    FE + 
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM- 117

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                       +  +   N +++ Y + G ++ A  +  Q+  KD VSWN+ML+GF QN
Sbjct: 118 -----------PDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL------GNLLNGKELHAYAIKQGFV 293
               +A + F          DQ+   N +S +G L      G + + + L    +    V
Sbjct: 167 GFVEEARKIF----------DQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIV 216

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S     N LM  Y +   ++    +F +M  +D ISW  +I GYAQN    +A  LF  +
Sbjct: 217 S----WNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272

Query: 354 QLEGLDADVMII------GSVLMACSGLKCMSQTKE------IHGYIIRKGLSDLVIL-- 399
            +  + A   ++      G +  A    + M +  E      I GY+  + +     L  
Sbjct: 273 PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFD 332

Query: 400 ----------NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
                     N +V  Y +CGNID ++ +F+ +  +D +SW +MIS Y  +G + EAL L
Sbjct: 333 QMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHL 392

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           F  M       +   L  ALS+ + ++ L+ GK+L+G +++ GF       ++L+ MY +
Sbjct: 393 FIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGK 452

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CG+++ A  VF  +  KD++ W +MI     HG GK A+ LF  M+  +  PD +T + +
Sbjct: 453 CGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKM-TIKPDDVTLVGV 511

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           L ACSH+G +++G ++   M  +Y +    +HY C++DLLGRA  L+EA   ++SM   P
Sbjct: 512 LSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYP 571

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
            A  W ALLGA R+H + ELGE  A+K+ E++P N G YVL+SN++AAS +W++V ++R 
Sbjct: 572 DAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRS 631

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
           +MR  G+KK PG SW+EI NK H F   D SH E++ IY  L E+  +L+++ G+V+ T+
Sbjct: 632 KMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKD-GFVSSTK 690

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
            VLH+VEEEEK  ML  HSE+LA+A+G+L    G  IR+ KNLRVC DCH+  K +S++ 
Sbjct: 691 LVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKIT 750

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
            R+++VRD+NRFHHF  G CSCGDYW
Sbjct: 751 QRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 161/590 (27%), Positives = 271/590 (45%), Gaps = 67/590 (11%)

Query: 23  VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHG 82
           +  WN  + AY+  G+    L  ++ MR         T+  +I         DC  K   
Sbjct: 60  IVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYLSNNKFDCARK--- 112

Query: 83  LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCL 142
            V +   D      N +++ Y K  +   AR LF++M EK DVV WN+++S ++ +G   
Sbjct: 113 -VFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEK-DVVSWNAMLSGFAQNGFVE 170

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           EA  +F +M    LV N  ++   L A      +   +E       S  + ++   N L+
Sbjct: 171 EARKIFDQM----LVKNEISWNGLLSAY----VQNGRIEDARRLFDSKMDWEIVSWNCLM 222

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
             Y R  ++ +A  +  ++  +D +SWN M+TG+ QN L  +A + F EL      P + 
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL------PIRD 276

Query: 263 CTVNAVSASGRLGN------------LLNGKELHAYAIKQGFVSDLQIG----------- 299
                   SG + N            +    E+   A+  G+V   QI            
Sbjct: 277 VFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPS 336

Query: 300 ------NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
                 NT++  YA+C  ++    +F +M  +D ISW  +I+GYAQ+    +AL LF  +
Sbjct: 337 RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM 396

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
           + +G   +   +   L +C+ +  +   K++HG +++ G  +  +  NA++ +YGKCG+I
Sbjct: 397 KRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSI 456

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + + +VFE I  KD+VSW +MI+ Y  +G   EAL LF  M +  ++ D +TLV  LSA 
Sbjct: 457 EEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSAC 515

Query: 473 SSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLIL 530
           S    + KG E  N      G        + ++D+  R G LD A  +   +    D   
Sbjct: 516 SHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAAT 575

Query: 531 WTSMINANGLHGR---GKVAIDLFYKMEAESFAPDH---ITFLALLYACS 574
           W +++ A+ +HG    G+ A +  ++ME     PD+      L+ LYA S
Sbjct: 576 WGALLGASRIHGDTELGEKAAEKVFEME-----PDNSGMYVLLSNLYAAS 620



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 235/519 (45%), Gaps = 64/519 (12%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A ++F+K+  R + +WN ML  YV NG        +++M       D  ++  ++   A 
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNAMLSGFAQ 165

Query: 71  LKDLDCGAKIHGLVL-----------------------KCGYDST-DFIV---NSLVAMY 103
              ++   KI   +L                       +  +DS  D+ +   N L+  Y
Sbjct: 166 NGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGY 225

Query: 104 AKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ----------- 152
            +      AR LFDRM  + D + WN +I+ Y+ +G   EA  LF E+            
Sbjct: 226 VRKKRLDDARSLFDRMPVR-DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMV 284

Query: 153 ----RVGLVTNAYTFVAALQACEDSSFETL-GMEIHAATVKSGQNL-------QVYVANA 200
               + G++  A      +    + S+  +    + +  ++  + L            N 
Sbjct: 285 SGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNT 344

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           ++  YA+CG + +A  +  ++  +D +SW +M++G+ Q+    +A+  F +++  G   +
Sbjct: 345 MVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILN 404

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
           +     A+S+   +  L  GK+LH   +K GF +    GN L+ MY KC  +     VF 
Sbjct: 405 RSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFE 464

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
            +T +D +SW T+IAGYA++    +AL LF ++++     DV ++G VL ACS    + +
Sbjct: 465 DITEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVG-VLSACSHTGFVDK 523

Query: 381 TKEIHGYIIRK-GLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMI-SS 436
             E    + +  G++ +      ++D+ G+ G +D + N+ +S+    D  +W +++ +S
Sbjct: 524 GMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGAS 583

Query: 437 YVHNG--LANEALELFYLMNEANVESDSITLVSALSAAS 473
            +H    L  +A E  + M   N  S    L+S L AAS
Sbjct: 584 RIHGDTELGEKAAEKVFEMEPDN--SGMYVLLSNLYAAS 620



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 126/238 (52%), Gaps = 12/238 (5%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y +CG++  A+ LFD++ QR   +W AM+  Y  +G+    L  + +M+  G  ++    
Sbjct: 349 YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSAL 408

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
            C + +CA +  L+ G ++HG ++K G+ +     N+L+AMY KC    +A  +F+ + E
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE 468

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D+V WN++I+ Y+  G   EAL LF  M ++ +  +  T V  L AC  + F   GME
Sbjct: 469 K-DIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGME 526

Query: 182 IHAATVKSGQNLQVYVANA-----LIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
              +     QN  +  ANA     +I +  R G++ EA  ++  +    D+ +W ++L
Sbjct: 527 YFNSMY---QNYGI-TANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 147/369 (39%), Gaps = 93/369 (25%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           + + G V +A ++FD++  +   +WN +L AYV NG     +E   R+    +  +  ++
Sbjct: 163 FAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGR----IEDARRLFDSKMDWEIVSW 218

Query: 62  PCVIKACAMLKDLDCGA----------KIHGLVLKCGYDS-------------------- 91
            C++      K LD             KI   ++  GY                      
Sbjct: 219 NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVF 278

Query: 92  ------TDFIVNSL----------------------VAMYAKCYDFRKARQLFDRMGEK- 122
                 + F+ N +                      +A Y +     KAR+LFD+M  + 
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN 338

Query: 123 -----------------------------EDVVLWNSIISAYSASGQCLEALGLFREMQR 153
                                         D + W ++IS Y+ SGQ  EAL LF +M+R
Sbjct: 339 TSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKR 398

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G + N      AL +C + +   LG ++H   VK+G        NAL+AMY +CG + E
Sbjct: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEE 458

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V   +  KD VSWN+M+ G+ ++    +A+  F  ++    KPD V  V  +SA   
Sbjct: 459 AFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSH 517

Query: 274 LGNLLNGKE 282
            G +  G E
Sbjct: 518 TGFVDKGME 526



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 2/140 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ +A  +F+ ++++ + +WN M+  Y  +G     L  +  M+ + I  D  T
Sbjct: 449 MYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVT 507

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    +D G +  + +    G  +       ++ +  +     +A  L   M
Sbjct: 508 LVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSM 567

Query: 120 GEKEDVVLWNSIISAYSASG 139
               D   W +++ A    G
Sbjct: 568 PFYPDAATWGALLGASRIHG 587



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 17/213 (7%)

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           S+N   +I   D+V W   IS+Y+  G    AL +F  M   +  + +  ++S   + + 
Sbjct: 48  SKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYN-AMISGYLSNNK 106

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
               +K       +  K  + +    + ++  Y + G L  A  +FN +  KD++ W +M
Sbjct: 107 FDCARK-------VFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAM 159

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           ++    +G  + A  +F +M       + I++  LL A   +G I + ++  +  + D++
Sbjct: 160 LSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFD-SKMDWE 214

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
           +  W     CL+    R   L++A      M +
Sbjct: 215 IVSW----NCLMGGYVRKKRLDDARSLFDRMPV 243


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/737 (35%), Positives = 424/737 (57%), Gaps = 5/737 (0%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N++++M  +  +   A ++F +M E+ DV  WN ++  Y  +G   EAL L+  M   G 
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPER-DVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGA 191

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YTF   L++C      T+G E+HA  ++ G  ++V V NAL+ MYA+CG +  A  
Sbjct: 192 RPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARK 251

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V   +   D +SWN+M+ G  +N      ++ F  +     +P+ +   +   ASG L +
Sbjct: 252 VFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSD 311

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L   KE+HA A+K+GF +D+   N+L+ MY+    +     VF +M  +D +SWT +I+G
Sbjct: 312 LDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISG 371

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSD 395
           Y +N    KALE++  +++  +  D + + S L AC+ L  +    ++H     KG +  
Sbjct: 372 YEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRY 431

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           +V+ NA+V++Y K   I+ +  VF+ +  KDV+SW+SMI+ +  N    EAL  F  M  
Sbjct: 432 IVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM-L 490

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
           A+V+ +S+T ++AL+A ++   L+ GKE++  ++R+G   EG V ++L+D+Y +CG    
Sbjct: 491 ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGY 550

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A   F    TKD++ W  M+     HG G +A+  F +M      PD +TF+ALL  CS 
Sbjct: 551 AWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSR 610

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           +G++++G +    M   Y + P  +HYAC+VDLL R   L E Y F+  M I P A VW 
Sbjct: 611 AGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWG 670

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL  CR+H N ELGE+ AK +LEL+P + G +VL+S+++A +  W +V +VR  MR  G
Sbjct: 671 ALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKG 730

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           L+   G SW+E+   IH+F+  D+SH +  EI   L  I E++ +  G+     + L + 
Sbjct: 731 LEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERM-KASGFAPVESYSLED- 788

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           +E  K  +L GHSERLA+A+G++ +T G+ I +TKN   C  CH   +++S++  RE+ V
Sbjct: 789 KEVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREITV 848

Query: 816 RDANRFHHFEAGVCSCG 832
           RD   FHHF  G CSCG
Sbjct: 849 RDTKEFHHFRDGSCSCG 865



 Score =  281 bits (720), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 191/599 (31%), Positives = 311/599 (51%), Gaps = 18/599 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M  + G    A ++F K+ +R VF+WN M+G Y   G     L+ Y RM   G   D +T
Sbjct: 138 MLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYT 197

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV+++C  + DL  G ++H  VL+ G      ++N+LV MYAKC D   AR++FD M 
Sbjct: 198 FPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGM- 256

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D + WN++I+ +  + +C   L LF  M    +  N  T  +   A    S      
Sbjct: 257 SLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAK 316

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIHA  VK G    V   N+LI MY+  G+M EA  V  ++E +D++SW +M++G+ +N 
Sbjct: 317 EIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNG 376

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA++ +  ++     PD V   +A++A   LG L  G +LH  A  +GF+  + + N
Sbjct: 377 FPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVAN 436

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++MYAK   +     VF  M  +D ISW+++IAG+  N+ + +AL  FR +  +    
Sbjct: 437 ALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVKPN 496

Query: 361 DVMII--GSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
            V  I   +   A   L+C    KEIH +++R+G+ S+  + NA++D+Y KCG   Y+  
Sbjct: 497 SVTFIAALAACAATGSLRC---GKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWA 553

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            F +  +KDVVSW  M++ +V +G  + AL  F  M E     D +T V+ L   S   +
Sbjct: 554 QFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGM 613

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSM 534
           + +G EL   +  K +++  ++   + +VD+ +R G L       N +  T D  +W ++
Sbjct: 614 VSQGWELFHSMTEK-YSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGAL 672

Query: 535 INANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           +N   +H     G++A  +  ++E    A  H+  L+ LYA   +G+  E  K  + MR
Sbjct: 673 LNGCRIHRNIELGELAAKIVLELEPND-AGYHV-LLSDLYA--DAGMWAEVSKVRKTMR 727



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 227/423 (53%), Gaps = 2/423 (0%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
           +VA    CE       G+        +     + + NA+++M  R G+   A  V  ++ 
Sbjct: 97  YVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKMP 156

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
            +D  SWN M+ G+ +     +A+  +  +  AG +PD       + + G + +L  G+E
Sbjct: 157 ERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGRE 216

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           +HA+ ++ G   ++ + N L+ MYAKC  V    +VF  M+  D ISW  +IAG+ +N+ 
Sbjct: 217 VHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHE 276

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNA 401
               LELF  +  + ++ ++M I SV +A   L  +   KEIH   +++G  +D+   N+
Sbjct: 277 CEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNS 336

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           ++ +Y   G +  +  VF  +E++D +SWT+MIS Y  NG  ++ALE++ LM   NV  D
Sbjct: 337 LIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPD 396

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
            +T+ SAL+A +SL  L  G +L+     KGF     VA++LV+MYA+   ++ A +VF 
Sbjct: 397 DVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFK 456

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  KD+I W+SMI     + +   A+  F  M A+   P+ +TF+A L AC+ +G +  
Sbjct: 457 YMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGSLRC 515

Query: 582 GKK 584
           GK+
Sbjct: 516 GKE 518


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 249/659 (37%), Positives = 400/659 (60%), Gaps = 8/659 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IHA  +++G     + A+ ++A  +    G +  A  V  Q+ N  S + NS++ G   
Sbjct: 6   QIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTD 65

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            +L+ +A+ F++E+   G  PD+  T  ++  S R  N   GK++H ++ K GF SD   
Sbjct: 66  KNLHQEALLFYQEMMVQGLIPDRY-TFPSLFKSCR--NSSEGKQIHCHSTKLGFASDTYA 122

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEG 357
            NTLM+MY+ C C+    +VF +M  +  +SW T+I  +AQ +   +A+ LF R ++ E 
Sbjct: 123 QNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSEN 182

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIV-DVYGKCGNIDYSR 416
           +  + + + +VL AC+  + ++  K IH YI   G    V+LN ++ DVY KCG +  +R
Sbjct: 183 VKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLAR 242

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           ++F+  + K++ SW  MI+ +V +    EAL LF  M    ++ D +T+ S L A + L 
Sbjct: 243 DLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLG 302

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L+ GK L+ +I ++  +++ ++ ++LVDMYA+CG+++ A +VF+ +  KD++ WT++I 
Sbjct: 303 ALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALIL 362

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
              + G+ + A+  F +M  +   PD ITF+ +L ACSH+G ++EG      M   Y + 
Sbjct: 363 GLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQ 422

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHY  LVD+LGRA  + EA + ++SM + P   V   LLGACR+H N E  E  AK+
Sbjct: 423 PTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQ 482

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           LLE+DP + G YVL+SN++ +S+KW++ ++ R  M   G++K PG S IE+   +H F+ 
Sbjct: 483 LLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVK 542

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D SH +S EI + L ++  KL +  GYV     VL ++ EEEK   L  HSE+LAIA+G
Sbjct: 543 GDSSHRQSSEINEMLEDMISKL-KNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFG 601

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +L ++ G+ IR+ KNLR+C DCHS  KL+S+L+ RE++VRD NRFHHF+ G CSC  +W
Sbjct: 602 LLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 202/410 (49%), Gaps = 19/410 (4%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           GS+  A  +F ++   T +T N+++            L  Y  M V G+  D +TFP + 
Sbjct: 36  GSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLF 95

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           K+C   ++   G +IH    K G+ S  +  N+L+ MY+ C     AR++FD+M E + V
Sbjct: 96  KSC---RNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKM-EDKTV 151

Query: 126 VLWNSIISAYSASGQCLEALGLF-REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           V W ++I  ++   Q  EA+ LF R M+   +  N  T V  L AC  +    +   IH 
Sbjct: 152 VSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHE 211

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
              + G    V +   L+ +Y +CG +  A  +  + + K+  SWN M+ G V++  Y +
Sbjct: 212 YIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEE 271

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  FRE+Q  G K D+V   + + A   LG L  GK LHAY  KQ    D+ +G  L+D
Sbjct: 272 ALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVD 331

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           MYAKC  +    +VF++M  +D ++WT +I G A       AL+ F  + ++G+  D + 
Sbjct: 332 MYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAIT 391

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
              VL ACS           H   + +G+S     N++ D YG    I++
Sbjct: 392 FVGVLAACS-----------HAGFVDEGISH---FNSMSDTYGIQPTIEH 427



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 141/281 (50%), Gaps = 2/281 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAF 59
           MY  CG ++ A ++FDK+  +TV +W  M+G +    +P   +  + R M+   +  +  
Sbjct: 129 MYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEV 188

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V+ ACA  +DL    +IH  + + G+     +   L+ +Y KC   + AR LFD+ 
Sbjct: 189 TLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKA 248

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK ++  WN +I+ +       EAL LFREMQ  G+  +  T  + L AC       LG
Sbjct: 249 QEK-NLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELG 307

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +HA   K   ++ V +  AL+ MYA+CG +  A  V +++  KD ++W +++ G    
Sbjct: 308 KWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMC 367

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
                A+Q+F E+   G KPD +  V  ++A    G +  G
Sbjct: 368 GQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEG 408



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 4/216 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  LFDK  ++ +F+WN M+  +V +      L  +  M+  GI  D  T
Sbjct: 231 VYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVT 290

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ AC  L  L+ G  +H  + K   D    +  +LV MYAKC     A Q+F  M 
Sbjct: 291 MASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP 350

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK DV+ W ++I   +  GQ   AL  F EM   G+  +A TFV  L AC  + F   G+
Sbjct: 351 EK-DVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGI 409

Query: 181 EIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEA 214
             H  ++     +Q  + +   L+ +  R G++ EA
Sbjct: 410 S-HFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEA 444



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 7/203 (3%)

Query: 378 MSQTKEIHGYIIRKGL-SDLVILNAIVDV--YGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           MSQ K+IH  ++R GL  D    + IV      + G++ Y+R VF  I +    +  S+I
Sbjct: 1   MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
                  L  EAL  +  M    +  D  T  S   +  + S   +GK+++    + GF 
Sbjct: 61  RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFA 117

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK- 553
            +    ++L++MY+ CG L  A KVF+ ++ K ++ W +MI  +    +   A+ LF + 
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177

Query: 554 MEAESFAPDHITFLALLYACSHS 576
           M++E+  P+ +T + +L AC+ +
Sbjct: 178 MKSENVKPNEVTLVNVLTACARA 200


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 287/869 (33%), Positives = 441/869 (50%), Gaps = 57/869 (6%)

Query: 2    YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
            Y + G V +A  LFD    + + TW  +L  Y   G      E +  M       +  ++
Sbjct: 212  YSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESM----TERNVVSW 267

Query: 62   PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              +I       DL    K+   + +    S     NS+V  Y  CY   +AR+LFD+M E
Sbjct: 268  NAMISGYVQNGDLKNARKLFDEMPEKNVASW----NSVVTGYCHCYRMSEARELFDQMPE 323

Query: 122  KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED-SSFETLGM 180
            +  V  W  +IS Y       EA  +F +M R     +   FV  L A       E +G 
Sbjct: 324  RNSVS-WMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIG- 381

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             +    +K+G    V V +A++  Y R G +  A      +  ++  SW +M+  F Q  
Sbjct: 382  SLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCG 441

Query: 241  LYCKAMQFFRELQGAGQKPDQ-VCTVNA-VSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                A+Q +  +      P+Q V T  A ++A  ++G +   + +    +    V+    
Sbjct: 442  RLDDAIQLYERV------PEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVA---- 491

Query: 299  GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             N ++  Y +   +     +F +M  ++  SW  +IAG+ QN    +ALEL   +   G 
Sbjct: 492  WNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGS 551

Query: 359  DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI----- 412
                    S L AC+ +  +   + IH   I+ G   +  ++N ++ +Y KCGN+     
Sbjct: 552  VPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSH 611

Query: 413  --------------------------DYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
                                      D +R VFE +  +DVVSWT++IS+YV  G    A
Sbjct: 612  VFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVA 671

Query: 447  LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
            L+LF  M    ++ + +T+ S LSA  +L  +K G++ +  I + GF+    V +SL+ M
Sbjct: 672  LDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITM 731

Query: 507  YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
            Y +CG  D    VF  +   DLI W +++     +G GK AI +F +ME E   PD ++F
Sbjct: 732  YFKCGYED-GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSF 790

Query: 567  LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
            L +L ACSH+GL++EG      M   Y + P   HY C+VDLLGRA +L EA   + +M 
Sbjct: 791  LGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMP 850

Query: 627  IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
            ++P + +W ALLGACR+H N ELG+ VA++L ++       YVL+SN+FA+   W  V +
Sbjct: 851  VKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAE 910

Query: 687  VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
            +R  M+  GL K PG SWI++ NK+H F+  D++H + +EIY  L E      R  GY+ 
Sbjct: 911  IRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCF-RATGYMP 969

Query: 747  QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
             T FVLH+VEEE+K   L  HSE+LA+ +G+L +  GS I+I KNLR+C DCH+F K +S
Sbjct: 970  DTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMS 1029

Query: 807  RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            ++  R++++RD NRFHHF  G CSCGDYW
Sbjct: 1030 KVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 158/615 (25%), Positives = 274/615 (44%), Gaps = 119/615 (19%)

Query: 3   GKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFP 62
           G+ G V +A ++F+++ QR V +WN+M+  Y  NG+                        
Sbjct: 182 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGK------------------------ 217

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
             +    +L D   G  I    +             L+  YAK     +AR++F+ M E+
Sbjct: 218 --VDEARLLFDAFVGKNIRTWTI-------------LLTGYAKEGRIEEAREVFESMTER 262

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            +VV WN++IS Y  +G    A  LF EM    + +                        
Sbjct: 263 -NVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVAS------------------------ 297

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
                           N+++  Y  C +M+EA  +  Q+  ++SVSW  M++G+V    Y
Sbjct: 298 ---------------WNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDY 342

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A   F ++     +PDQ   V  +SA   L +L     L   AIK G+  D+ +G+ +
Sbjct: 343 WEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAI 402

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           ++ Y +   ++     F  M  ++  SWTT+IA +AQ      A++L+  V     +  V
Sbjct: 403 LNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVP----EQTV 458

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
               +++ A + +  + + + I   I+     ++V  NAI+  Y + G +  ++++F+ +
Sbjct: 459 ATKTAMMTAYAQVGRIQKARLIFDEILN---PNVVAWNAIIAGYTQNGMLKEAKDLFQKM 515

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKG 481
             K+  SW +MI+ +V N  + EALEL   L    +V SDS +  SALSA +++  ++ G
Sbjct: 516 PVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDS-SFTSALSACANIGDVEIG 574

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCG------------------------------ 511
           + ++   I+ G      V + L+ MYA+CG                              
Sbjct: 575 RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSEN 634

Query: 512 -ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
             LD A  VF  +  +D++ WT++I+A    G G+VA+DLF  M A    P+ +T  +LL
Sbjct: 635 YMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLL 694

Query: 571 YACSHSGLINEGKKF 585
            AC + G I  G++F
Sbjct: 695 SACGNLGAIKLGEQF 709



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/510 (20%), Positives = 229/510 (44%), Gaps = 46/510 (9%)

Query: 183 HAATVKSGQNLQVYV--ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           H +  K+ +  Q ++   N  I    R G++ EA  V  ++  +D VSWNSM+ G+ QN 
Sbjct: 157 HKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNG 216

Query: 241 LYCKAMQFFRELQG---------------------AGQKPDQVCTVNAVSASGRL----- 274
              +A   F    G                     A +  + +   N VS +  +     
Sbjct: 217 KVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQ 276

Query: 275 -GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
            G+L N ++L     ++   S     N+++  Y  C  ++    +F QM  ++ +SW  +
Sbjct: 277 NGDLKNARKLFDEMPEKNVAS----WNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVM 332

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           I+GY   + + +A ++F  +       D  I   VL A +GL  +     +    I+ G 
Sbjct: 333 ISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGY 392

Query: 394 S-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
             D+V+ +AI++ Y + G++D + + FE++  ++  SWT+MI+++   G  ++A++L+  
Sbjct: 393 EGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYER 452

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           + E  V     T  + ++A + +  ++K +     I  +  N      ++++  Y + G 
Sbjct: 453 VPEQTVA----TKTAMMTAYAQVGRIQKAR----LIFDEILNPNVVAWNAIIAGYTQNGM 504

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           L  A  +F  +  K+   W +MI     +   + A++L  ++      P   +F + L A
Sbjct: 505 LKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSA 564

Query: 573 CSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           C++ G +  G+    + ++   Q + +  +   L+ +  +  ++E+     R+++++ T 
Sbjct: 565 CANIGDVEIGRVIHSLAIKTGCQFNSYVMN--GLISMYAKCGNVEDGSHVFRTIRVKDTV 622

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELD 661
             W +L+     +   +   +V +K+ + D
Sbjct: 623 S-WNSLISGLSENYMLDDARVVFEKMPKRD 651


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/630 (38%), Positives = 390/630 (61%), Gaps = 7/630 (1%)

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G +  A     ++   D + WN+++ G+ Q ++    ++ + ++Q +   P+    +  +
Sbjct: 33  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            A G       GK++H    K GF S++ + N+L+ MYAK   ++Y   VF ++  +  +
Sbjct: 93  KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           SWT+II+GY QN   ++AL +F+ ++   +  D + + SV+ A + ++ + Q K IHG +
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212

Query: 389 IRKGL---SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
            + GL    D+VI  ++  +Y K G ++ +R  F  +E  +++ W +MIS Y +NG   E
Sbjct: 213 TKLGLEFEPDIVI--SLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEE 270

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A++LF  M   N+  DSIT+ SA+ A++ +  L+  + L+G+I +  +  +  V + L+D
Sbjct: 271 AIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLID 330

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MYA+CG++ +A  VF+ V  KD++LW+ MI   GLHG G+ AI L+ +M+     P+  T
Sbjct: 331 MYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGT 390

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F+ LL AC +SGL+ EG +   +M  D+ ++P  +HY+C+VDLLGRA +L +AY F+ SM
Sbjct: 391 FIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 449

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
            I+P   VW ALL AC++H    LGEI A++L  LDP N G+YV +SN++A++  W  V 
Sbjct: 450 PIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVA 509

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
            VR+ M   GL K  G S IEI   + +F   D+SH +S EI+++L  + ++L +  GYV
Sbjct: 510 NVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRL-KAAGYV 568

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
              + VLH++  EE  + L  HSERLA+AYG++ +  G+ +RITKNLR C++CHS  KL+
Sbjct: 569 PHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLI 628

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S+L  RE+++RDA RFHHF+ GVCSCGD+W
Sbjct: 629 SKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 247/473 (52%), Gaps = 8/473 (1%)

Query: 108 DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
           D   A + F  + E  D++LWN+II  Y+        + ++ +MQ   +  N +TF+  L
Sbjct: 34  DVNYAHKAFREVSEP-DILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           +AC  +S E +G +IH  T K G    V+V N+L++MYA+ G+++ A  V  +L ++  V
Sbjct: 93  KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           SW S+++G+VQN    +A+  F+E++    KPD +  V+ ++A   + +L  GK +H   
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
            K G   +  I  +L  MYAK   V      F +M   + I W  +I+GYA N    +A+
Sbjct: 213 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 272

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVY 406
           +LFR +  + +  D + + S ++A + +  +   + + GYI +    D   +N  ++D+Y
Sbjct: 273 KLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMY 332

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            KCG+I  +R VF+ +  KDVV W+ MI  Y  +G   EA+ L+  M +A V  +  T +
Sbjct: 333 AKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFI 392

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
             L+A  +  ++K+G EL   +   G        S +VD+  R G L+ A      +  K
Sbjct: 393 GLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 452

Query: 527 DLI-LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
             + +W ++++A  +H +   G++A +  + ++   +   H   L+ LYA +H
Sbjct: 453 PGVSVWGALLSACKIHRKVRLGEIAAEQLFILDP--YNTGHYVQLSNLYASAH 503



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 228/459 (49%), Gaps = 10/459 (2%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G V  A + F +VS+  +  WNA++  Y         +  Y  M++  +  + FTF  V+
Sbjct: 33  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KAC        G +IHG   K G+ S  F+ NSLV+MYAK      AR +FD++ ++  V
Sbjct: 93  KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRT-V 151

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V W SIIS Y  +G  +EAL +F+EM++  +  +    V+ + A  +      G  IH  
Sbjct: 152 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 211

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
             K G   +  +  +L  MYA+ G +  A     ++E  + + WN+M++G+  N    +A
Sbjct: 212 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 271

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           ++ FRE+     + D +   +AV AS ++G+L   + L  Y  K  +  D  +   L+DM
Sbjct: 272 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 331

Query: 306 YAKCCCVNYMGR-VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL-DADVM 363
           YAKC  + Y+ R VF ++  +D + W+ +I GY  +    +A+ L+  ++  G+   D  
Sbjct: 332 YAKCGSI-YLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGT 390

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            IG +L AC     + +  E+   +   G+       + +VD+ G+ G ++ + +   S+
Sbjct: 391 FIG-LLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 449

Query: 423 ESKDVVS-WTSMISS-YVHNG--LANEALELFYLMNEAN 457
             K  VS W +++S+  +H    L   A E  ++++  N
Sbjct: 450 PIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYN 488



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 173/365 (47%), Gaps = 10/365 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  A  +FDK+  RTV +W +++  YV NG+P+  L  +  MR   +  D   
Sbjct: 129 MYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIA 188

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ A   ++DL  G  IHGLV K G +    IV SL  MYAK      AR  F+RM 
Sbjct: 189 LVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRM- 247

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK +++LWN++IS Y+ +G   EA+ LFREM    +  ++ T  +A+ A        L  
Sbjct: 248 EKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELAR 307

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +     KS      +V   LI MYA+CG +  A  V  ++ +KD V W+ M+ G+  + 
Sbjct: 308 WLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHG 367

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  + E++ AG  P+    +  ++A    G +  G EL       G     Q   
Sbjct: 368 HGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQ--- 424

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
                    C V+ +GR  Y   A DFI    I  G +     L A ++ R V+L  + A
Sbjct: 425 ------HYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAA 478

Query: 361 DVMII 365
           + + I
Sbjct: 479 EQLFI 483


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/630 (38%), Positives = 390/630 (61%), Gaps = 7/630 (1%)

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G +  A     ++   D + WN+++ G+ Q ++    ++ + ++Q +   P+    +  +
Sbjct: 48  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            A G       GK++H    K GF S++ + N+L+ MYAK   ++Y   VF ++  +  +
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 167

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           SWT+II+GY QN   ++AL +F+ ++   +  D + + SV+ A + ++ + Q K IHG +
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227

Query: 389 IRKGL---SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
            + GL    D+VI  ++  +Y K G ++ +R  F  +E  +++ W +MIS Y +NG   E
Sbjct: 228 TKLGLEFEPDIVI--SLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEE 285

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A++LF  M   N+  DSIT+ SA+ A++ +  L+  + L+G+I +  +  +  V + L+D
Sbjct: 286 AIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLID 345

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MYA+CG++ +A  VF+ V  KD++LW+ MI   GLHG G+ AI L+ +M+     P+  T
Sbjct: 346 MYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGT 405

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F+ LL AC +SGL+ EG +   +M  D+ ++P  +HY+C+VDLLGRA +L +AY F+ SM
Sbjct: 406 FIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 464

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
            I+P   VW ALL AC++H    LGEI A++L  LDP N G+YV +SN++A++  W  V 
Sbjct: 465 PIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVA 524

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
            VR+ M   GL K  G S IEI   + +F   D+SH +S EI+++L  + ++L +  GYV
Sbjct: 525 NVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRL-KAAGYV 583

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
              + VLH++  EE  + L  HSERLA+AYG++ +  G+ +RITKNLR C++CHS  KL+
Sbjct: 584 PHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLI 643

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S+L  RE+++RDA RFHHF+ GVCSCGD+W
Sbjct: 644 SKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 262/511 (51%), Gaps = 11/511 (2%)

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
           +LK LD   +++  ++  G     F++   +       D   A + F  + E  D++LWN
Sbjct: 14  LLKHLD---QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEP-DILLWN 69

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           +II  Y+        + ++ +MQ   +  N +TF+  L+AC  +S E +G +IH  T K 
Sbjct: 70  AIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKY 129

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G    V+V N+L++MYA+ G+++ A  V  +L ++  VSW S+++G+VQN    +A+  F
Sbjct: 130 GFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVF 189

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           +E++    KPD +  V+ ++A   + +L  GK +H    K G   +  I  +L  MYAK 
Sbjct: 190 KEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKR 249

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             V      F +M   + I W  +I+GYA N    +A++LFR +  + +  D + + S +
Sbjct: 250 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 309

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNVFESIESKDVV 428
           +A + +  +   + + GYI +    D   +N  ++D+Y KCG+I  +R VF+ +  KDVV
Sbjct: 310 LASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVV 369

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
            W+ MI  Y  +G   EA+ L+  M +A V  +  T +  L+A  +  ++K+G EL   +
Sbjct: 370 LWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM 429

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---G 544
              G        S +VD+  R G L+ A      +  K  + +W ++++A  +H +   G
Sbjct: 430 PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLG 489

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           ++A +  + ++   +   H   L+ LYA +H
Sbjct: 490 EIAAEQLFILDP--YNTGHYVQLSNLYASAH 518



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 218/435 (50%), Gaps = 7/435 (1%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G V  A + F +VS+  +  WNA++  Y         +  Y  M++  +  + FTF  V+
Sbjct: 48  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KAC        G +IHG   K G+ S  F+ NSLV+MYAK      AR +FD++ ++  V
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRT-V 166

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V W SIIS Y  +G  +EAL +F+EM++  +  +    V+ + A  +      G  IH  
Sbjct: 167 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 226

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
             K G   +  +  +L  MYA+ G +  A     ++E  + + WN+M++G+  N    +A
Sbjct: 227 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 286

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           ++ FRE+     + D +   +AV AS ++G+L   + L  Y  K  +  D  +   L+DM
Sbjct: 287 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 346

Query: 306 YAKCCCVNYMGR-VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL-DADVM 363
           YAKC  + Y+ R VF ++  +D + W+ +I GY  +    +A+ L+  ++  G+   D  
Sbjct: 347 YAKCGSI-YLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGT 405

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            IG +L AC     + +  E+   +   G+       + +VD+ G+ G ++ + +   S+
Sbjct: 406 FIG-LLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 464

Query: 423 ESKDVVS-WTSMISS 436
             K  VS W +++S+
Sbjct: 465 PIKPGVSVWGALLSA 479



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 173/365 (47%), Gaps = 10/365 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  A  +FDK+  RTV +W +++  YV NG+P+  L  +  MR   +  D   
Sbjct: 144 MYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIA 203

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ A   ++DL  G  IHGLV K G +    IV SL  MYAK      AR  F+RM 
Sbjct: 204 LVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRM- 262

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK +++LWN++IS Y+ +G   EA+ LFREM    +  ++ T  +A+ A        L  
Sbjct: 263 EKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELAR 322

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +     KS      +V   LI MYA+CG +  A  V  ++ +KD V W+ M+ G+  + 
Sbjct: 323 WLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHG 382

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  + E++ AG  P+    +  ++A    G +  G EL       G     Q   
Sbjct: 383 HGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQ--- 439

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
                    C V+ +GR  Y   A DFI    I  G +     L A ++ R V+L  + A
Sbjct: 440 ------HYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAA 493

Query: 361 DVMII 365
           + + I
Sbjct: 494 EQLFI 498


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/625 (38%), Positives = 383/625 (61%), Gaps = 11/625 (1%)

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           ++  D  SWNS++    ++    +A++ F  ++     P +     A+ A   L ++ +G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSG 95

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K+ H  A   G+ SD+ + + L+ MY+ C  +    +VF ++  ++ +SWT++I GY  N
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155

Query: 341 NCHLKALELFRTVQLEGLDADV------MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
              L A+ LF+ + +E  D D       M + SV+ ACS +     T+ IH ++I++G  
Sbjct: 156 GNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFD 215

Query: 395 DLV-ILNAIVDVYGKCGN--IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
             V + N ++D Y K G   +  +R +F+ I  KD VS+ S++S Y  +G++NEA ++F 
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFR 275

Query: 452 -LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
            L+ E  V  + ITL + L A S    L+ GK ++  +IR G   +  V +S++DMY +C
Sbjct: 276 RLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G ++ A   F+ ++ K++  WT+MI   G+HG    A++LF  M      P++ITF+++L
Sbjct: 336 GRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            ACSH+GL + G  +   M+  + ++P  EHY C+VDLLGRA  L++AY  ++ M++EP 
Sbjct: 396 AACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPD 455

Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
           + +W +LL ACR+H N EL EI   +L ELDP N G Y+L+S+++A S +WKDVE+VRM 
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMT 515

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
           M+  GL K PG S +E+  ++H F+  D+ H + ++IY+ LAE+  KL  E GYV+ T  
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL-LEAGYVSNTSS 574

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
           V H+V+EEEK   L  HSE+LAIA+G++ +  GS + + KNLRVC DCH+  KL+S++  
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVD 634

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           RE VVRDA RFHHF+ G CSCGDYW
Sbjct: 635 REFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/450 (32%), Positives = 242/450 (53%), Gaps = 22/450 (4%)

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           LF+R  +K DV  WNS+I+  + SG   EAL  F  M+++ L     +F  A++AC    
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G + H      G    ++V++ALI MY+ CGK+ +A  V  ++  ++ VSW SM+ 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150

Query: 235 GFVQNDLYCKAMQFFREL------QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           G+  N     A+  F++L        A    D +  V+ +SA  R+      + +H++ I
Sbjct: 151 GYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVI 210

Query: 289 KQGFVSDLQIGNTLMDMYAKC--CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
           K+GF   + +GNTL+D YAK     V    ++F Q+  +D +S+ +I++ YAQ+    +A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 347 LELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVD 404
            ++FR +  E  +  + + + +VL+A S    +   K IH  +IR GL D VI+  +I+D
Sbjct: 271 FDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
           +Y KCG ++ +R  F+ +++K+V SWT+MI+ Y  +G A +ALELF  M ++ V  + IT
Sbjct: 331 MYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKG-FNLEGSVA--SSLVDMYARCGALDIANKVFN 521
            VS L+A S   +   G   + F   KG F +E  +     +VD+  R G L    K ++
Sbjct: 391 FVSVLAACSHAGLHDVG--WHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL---QKAYD 445

Query: 522 CVQT----KDLILWTSMINANGLHGRGKVA 547
            +Q      D I+W+S++ A  +H   ++A
Sbjct: 446 LIQKMKMEPDSIIWSSLLAACRIHKNVELA 475



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 224/446 (50%), Gaps = 34/446 (7%)

Query: 14  LFDKVSQRT-VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           LF++   +T VF+WN+++     +G+    L  +S MR L +     +FPC IKAC+ L 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D+  G + H      GY S  F+ ++L+ MY+ C     AR++FD +  K ++V W S+I
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI-PKRNIVSWTSMI 149

Query: 133 SAYSASGQCLEALGLFREM------QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
             Y  +G  L+A+ LF+++          +  ++   V+ + AC   + + L   IH+  
Sbjct: 150 RGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFV 209

Query: 187 VKSGQNLQVYVANALIAMYARCGK--MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
           +K G +  V V N L+  YA+ G+  +  A  +  Q+ +KD VS+NS+++ + Q+ +  +
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRL------GNLLNGKELHAYAIKQGFVSDLQI 298
           A   FR L       ++V T N ++ S  L      G L  GK +H   I+ G   D+ +
Sbjct: 270 AFDVFRRLI-----KEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G +++DMY KC  V      F +M  ++  SWT +IAGY  +    KALELF  +   G+
Sbjct: 325 GTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             + +   SVL ACS       G    +  K   G  +  GL        +VD+ G+ G 
Sbjct: 385 RPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFG--VEPGLEH---YGCMVDLLGRAGF 439

Query: 412 IDYSRNVFESIE-SKDVVSWTSMISS 436
           +  + ++ + ++   D + W+S++++
Sbjct: 440 LQKAYDLIQKMKMEPDSIIWSSLLAA 465



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 204/430 (47%), Gaps = 34/430 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG + DA ++FD++ +R + +W +M+  Y  NG  L  +  +  + +     DA  
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATM 179

Query: 61  F------PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD--FRKA 112
           F        VI AC+ +        IH  V+K G+D    + N+L+  YAK  +     A
Sbjct: 180 FLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACE 171
           R++FD++ +K D V +NSI+S Y+ SG   EA  +FR + +  +VT N  T    L A  
Sbjct: 240 RKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVS 298

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            S    +G  IH   ++ G    V V  ++I MY +CG++  A     +++NK+  SW +
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTA 358

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M+ G+  +    KA++ F  +  +G +P+ +  V+ ++A    G  L+    H +   +G
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG--LHDVGWHWFNAMKG 416

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAG-YAQN 340
               ++ G   ++ Y   C V+ +GR  +   A D I           W++++A      
Sbjct: 417 RFG-VEPG---LEHYG--CMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHK 470

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSG----LKCMSQTKEIHGYIIRKGLSDL 396
           N  L  + + R  +L+  +    ++ S + A SG    ++ +  T +  G +   G S L
Sbjct: 471 NVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFS-L 529

Query: 397 VILNAIVDVY 406
           + LN  V V+
Sbjct: 530 LELNGEVHVF 539


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 263/711 (36%), Positives = 411/711 (57%), Gaps = 44/711 (6%)

Query: 165 AALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI--AMYARCGKMTEAAGVLYQLE 222
           A  Q C  +SF+ L  +IHA  +++ +    Y A+ L   A ++    +  A  V  Q+ 
Sbjct: 144 ALFQQC--TSFKQLK-QIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIP 200

Query: 223 NKDSVSWNSMLTGF-VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             +  SWN ++      +D     + F R L  +   P++      + A       L GK
Sbjct: 201 QPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGK 260

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA--QDFISWTTIIAGYAQ 339
            +H  AIK  F  D+ + N+L+  YA C  ++    VF  +    +D +SW +++ G+ Q
Sbjct: 261 AVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQ 320

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVI 398
                KAL+LF  ++ EG+  + + + SV+ AC+    ++  +++  YI R + + +L +
Sbjct: 321 GGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNV 380

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS-------------------------- 432
            NA +D++ KCG ++ +R +F+++E +DVVSWT+                          
Sbjct: 381 CNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDI 440

Query: 433 -----MISSYVHNGLANEALELF--YLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
                +IS Y  +G   EAL +F    + ++    D +TL+S LSA + L  +  G+ ++
Sbjct: 441 PAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIH 500

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
           G+I ++   L  ++A+SL+DMY++ G ++ A +VF+ +  KD+ +W++MI    +HGRG+
Sbjct: 501 GYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGE 560

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            AI+LF  M+     P+ +TF  LL ACSHSGL++EGK+  + M   Y + P  +HY+C+
Sbjct: 561 AAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCM 620

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           VD+LGRA HLEEA +F+  M + P+A VW ALLGAC +H N EL E    +LLE++PGN 
Sbjct: 621 VDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNH 680

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
           G YVL+SN++A +  W+ V ++R +MR SGLKK  G S IEI   +H FI  D +H  S 
Sbjct: 681 GAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSR 740

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE-KVQMLYGHSERLAIAYGVLKSTEGS 784
           +IY KL EI  +L R  GYVA T  +L  VEEEE K + L  HSE++AIA+G++++    
Sbjct: 741 DIYAKLDEIMARL-RSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQ 799

Query: 785 LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            IRI KNLRVC DCH+  K+VS+++GR++V+RD  RFHHF  G CSC DYW
Sbjct: 800 AIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/525 (28%), Positives = 253/525 (48%), Gaps = 45/525 (8%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSL--VAMYAKCYDFRKARQLFDRMGE 121
           + + C   K L    +IH  +L+       +  + L   A ++       AR++FD++  
Sbjct: 145 LFQQCTSFKQL---KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQI-P 200

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLF-REMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           + ++  WN +I A + S   ++++ +F R +       N +TF   ++A  +     +G 
Sbjct: 201 QPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGK 260

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNSMLTGFVQ 238
            +H   +K+     V+V N+LI  YA CG +  A  V   +E  NKD VSWNSM+TGFVQ
Sbjct: 261 AVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQ 320

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                KA+  F  ++  G  P+ V  V+ +SA  +  NL  G+++  Y  +   + +L +
Sbjct: 321 GGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNV 380

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH--------------- 343
            N  +DM+ KC  V     +F  M  +D +SWTTII GYA+ + H               
Sbjct: 381 CNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDI 440

Query: 344 ----------------LKALELFRTVQL--EGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
                            +AL +FR +QL   G   D + + S L AC+ L  M   + IH
Sbjct: 441 PAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIH 500

Query: 386 GYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           GYI ++ +  +  +  +++D+Y K G+++ +  VF SI +KDV  W++MI+    +G   
Sbjct: 501 GYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGE 560

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSL 503
            A+ELF  M E  V+ +S+T  + L A S   ++ +GK L   + R  G   +    S +
Sbjct: 561 AAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCM 620

Query: 504 VDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKVA 547
           VD+  R G L+ A K    +       +W +++ A  +HG  ++A
Sbjct: 621 VDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELA 665



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 227/459 (49%), Gaps = 48/459 (10%)

Query: 7   SVLD-AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFTFPCV 64
           S LD A ++FD++ Q  +++WN ++ A  ++ +P++ +  + RM        + FTFP +
Sbjct: 187 SALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVL 246

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM-GEKE 123
           IKA A  +    G  +HG+ +K  +    F++NSL+  YA C     A  +F+ + G  +
Sbjct: 247 IKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNK 306

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D+V WNS+++ +   G   +AL LF  M+  G+  NA T V+ + AC  +   TLG ++ 
Sbjct: 307 DIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVC 366

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW-------------- 229
               ++   + + V NA I M+ +CG++  A G+   +E +D VSW              
Sbjct: 367 DYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHG 426

Query: 230 -----------------NSMLTGFVQNDLYCKAMQFFRELQ--GAGQKPDQVCTVNAVSA 270
                            N +++G+ Q+    +A+  FRELQ   +G +PDQV  ++ +SA
Sbjct: 427 IARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSA 486

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
             +LG +  G+ +H Y  K+    +  +  +L+DMY+K   V     VF+ +  +D   W
Sbjct: 487 CAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVW 546

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKE 383
           + +IAG A +     A+ELF  +Q   +  + +   ++L ACS       G +   + + 
Sbjct: 547 SAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMER 606

Query: 384 IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
           ++G + +         + +VDV G+ G+++ +    E +
Sbjct: 607 VYGVVPKTKH-----YSCMVDVLGRAGHLEEALKFIEGM 640



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 5/227 (2%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL--GISVDAFTFPCVIKAC 68
           A  +FD + ++ +  WN ++  Y  +G P   L  +  +++   G   D  T    + AC
Sbjct: 428 ARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSAC 487

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW 128
           A L  +D G  IHG + K        +  SL+ MY+K  D  KA ++F  +G K DV +W
Sbjct: 488 AQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNK-DVFVW 546

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           +++I+  +  G+   A+ LF +MQ   +  N+ TF   L AC  S     G  +     +
Sbjct: 547 SAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMER 606

Query: 189 S-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
             G   +    + ++ +  R G + EA   +  +    S S W ++L
Sbjct: 607 VYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALL 653



 Score = 42.7 bits (99), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G V  A ++F  +  + VF W+AM+     +G     +E +  M+   +  ++ T
Sbjct: 521 MYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVT 580

Query: 61  FPCVIKACAMLKDLDCGA-------KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           F  ++ AC+    +D G        +++G+V K  + S       +V +  +     +A 
Sbjct: 581 FTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSC------MVDVLGRAGHLEEAL 634

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
           +  + M       +W +++ A
Sbjct: 635 KFIEGMPLAPSASVWGALLGA 655


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/704 (35%), Positives = 402/704 (57%), Gaps = 55/704 (7%)

Query: 182  IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            +HA  +K+G        N L+ +YA+   + +A  +  ++   D  SW  +++GF +  L
Sbjct: 310  LHAKLIKNG--CVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367

Query: 242  YCKAMQFFRELQGAGQKPDQ-VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                +  F ++Q  G  P+Q   ++   S S  + +   GK +H + ++ G   D  + N
Sbjct: 368  SADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNN 427

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            +++D Y KC C  Y  ++F  M  +D +SW  +++ Y Q     K+++LFR  QL G DA
Sbjct: 428  SILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFR--QLPGKDA 485

Query: 361  ---DVMIIGSVLMAC------------------------------SGLKCMSQTKEIHGY 387
               + MI G +   C                              S L  +   K+IH  
Sbjct: 486  ASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQ 545

Query: 388  IIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESK---------------DVVSWT 431
            +++ G L D  + N+++D+Y KCG ++ +  +F+ +  +               + VSW+
Sbjct: 546  VLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWS 605

Query: 432  SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
            SM+S YV NG   +AL+ F  M  + VE D  TL S +SA +S  +L+ G++++G+I + 
Sbjct: 606  SMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKI 665

Query: 492  GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
            G  L+  + SS++DMY +CG+L+ A  +FN  + ++++LWTSMI+   LHG+G+ A+ LF
Sbjct: 666  GHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLF 725

Query: 552  YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
              M  E   P+ ++F+ +L ACSH+GL+ EG K+  +MR  Y + P  EH+ C+VDL GR
Sbjct: 726  ELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGR 785

Query: 612  ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
            A  L E  +F+ +  I   + VW + L +CRVH N E+G  V KKLLEL+P + G Y+L 
Sbjct: 786  AGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILF 845

Query: 672  SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
            S++ A   +W++  ++R  M+  G+KK P  SWI++ N++HSF+  D+SH +  +IY  L
Sbjct: 846  SSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYL 905

Query: 732  AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKN 791
             E+  +L +E GY      V+ +VE+E++  +L  HSE+LAIAYG++ +  G+ IR+ KN
Sbjct: 906  DELIGRL-KEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKN 964

Query: 792  LRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            LRVC+DCH+F K  S L GRE+++RD +RFHHF+ G CSC DYW
Sbjct: 965  LRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 236/491 (48%), Gaps = 61/491 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K  ++  A ++F+++ Q  VF+W  ++  +   G    VL  +++M+  G+  + FT
Sbjct: 330 LYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFT 389

Query: 61  FPCVIKACAM-LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+K+C+  + D   G  IHG +L+ G D    + NS++  Y KC  F  A +LF  M
Sbjct: 390 LSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLM 449

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREM--------------------QRVGL--- 156
            EK D V WN ++S+Y   G   +++ LFR++                    +RV L   
Sbjct: 450 AEK-DTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELL 508

Query: 157 --------VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
                     N  TF  AL      S   LG +IH   +K G     +V N+LI MY +C
Sbjct: 509 YKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKC 568

Query: 209 GKMTEAAGVLYQLENK---------------DSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
           G+M +A+ +   L  +               +SVSW+SM++G+VQN  +  A++ F  + 
Sbjct: 569 GEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMI 628

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
            +  + D+    + VSA    G L  G+++H Y  K G   D+ +G++++DMY KC  +N
Sbjct: 629 CSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLN 688

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
               +F Q   ++ + WT++I+G A +    +A+ LF  +  EG+  + +    VL ACS
Sbjct: 689 DAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACS 748

Query: 374 -------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN-VFESIESK 425
                  G K     +E++G  IR G         +VD+YG+ G ++  +  +  +  SK
Sbjct: 749 HAGLLEEGCKYFRLMREVYG--IRPGAEH---FTCMVDLYGRAGRLNEIKEFIHNNAISK 803

Query: 426 DVVSWTSMISS 436
               W S +SS
Sbjct: 804 LSSVWRSFLSS 814



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 155/624 (24%), Positives = 292/624 (46%), Gaps = 77/624 (12%)

Query: 28  AMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD---LDCGAKIHGLV 84
           +ML + +S G     + T   +  LG S+ ++ +P +    +   D         +H  +
Sbjct: 259 SMLASKISQG----TVATVGGLLFLGFSLSSYFYPPLXYFSSTFSDSMNYPNSEVLHAKL 314

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           +K G        N L+ +YAK  +  +A ++F+ +  + DV  W  +IS ++  G   + 
Sbjct: 315 IKNG--CVGIRGNHLLNLYAKSQNLEQAHKMFEEI-PQTDVFSWTVLISGFARIGLSADV 371

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFET-LGMEIHAATVKSGQNLQVYVANALIA 203
           LGLF +MQ  G+  N +T    L++C  +  ++ +G  IH   +++G +L   + N+++ 
Sbjct: 372 LGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILD 431

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG--------- 254
            Y +C     A  +   +  KD+VSWN M++ ++Q     K++  FR+L G         
Sbjct: 432 YYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTM 491

Query: 255 ----------------------AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
                                 AG   +++    A+  +  L  L  GK++H   +K G 
Sbjct: 492 IDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGV 551

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ---------------DFISWTTIIAGY 337
           + D  + N+L+DMY KC  +     +F  +  +               + +SW+++++GY
Sbjct: 552 LDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGY 611

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
            QN     AL+ F  +    ++ D   + SV+ AC+    +   +++HGYI + G   D+
Sbjct: 612 VQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDV 671

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            + ++I+D+Y KCG+++ +  +F   + ++VV WTSMIS    +G   EA+ LF LM   
Sbjct: 672 FLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINE 731

Query: 457 NVESDSITLVSALSAASSLSILKKG-------KELNGFIIRKGFNLEGSVASSLVDMYAR 509
            +  + ++ V  L+A S   +L++G       +E+ G  IR G        + +VD+Y R
Sbjct: 732 GITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYG--IRPG----AEHFTCMVDLYGR 785

Query: 510 CGAL-DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK-MEAESF-APDHITF 566
            G L +I   + N   +K   +W S +++  +H   ++ I +  K +E E F A  +I F
Sbjct: 786 AGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILF 845

Query: 567 LALLYACSHSGLINEGKKFLEIMR 590
            ++   C+      E  K   +M+
Sbjct: 846 SSI---CATEHRWEEAAKIRSLMQ 866



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/462 (22%), Positives = 201/462 (43%), Gaps = 49/462 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +  +  LF ++  +   +WN M+   + NG     LE   +M   G + +  TF
Sbjct: 464 YLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTF 523

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              +   + L  L  G +IH  VLK G     F+ NSL+ MY KC +  KA  +F  + +
Sbjct: 524 SIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQ 583

Query: 122 K----------EDVVL----WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
           +          +D V+    W+S++S Y  +G+  +AL  F  M    +  + +T  + +
Sbjct: 584 ESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVV 643

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
            AC  +    LG ++H    K G  L V++ +++I MY +CG + +A  +  Q ++++ V
Sbjct: 644 SACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVV 703

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL---- 283
            W SM++G   +    +A++ F  +   G  P++V  V  ++A    G L  G +     
Sbjct: 704 LWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLM 763

Query: 284 -HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAG-YAQN 340
              Y I+ G     +    ++D+Y +   +N +    +        S W + ++      
Sbjct: 764 REVYGIRPG----AEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHK 819

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMA-------CSGLKCMSQTK----------- 382
           N  +      + ++LE  DA   I+ S + A        + ++ + Q +           
Sbjct: 820 NIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWI 879

Query: 383 ----EIHGYII--RKGLSDLVILNAIVDVYGKCGNIDYSRNV 418
               ++H +++  R    D  I + + ++ G+   I YS +V
Sbjct: 880 QLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDV 921


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/754 (35%), Positives = 420/754 (55%), Gaps = 73/754 (9%)

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           Q+FDR+ E  +  +WN+++ AY  S    +AL L++ M +  +  + YT+   +QAC   
Sbjct: 96  QIFDRI-ENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVR 154

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
             E  G EIH   +K G +  VYV N LI MYA CG M +A  +  +    DSVSWNS+L
Sbjct: 155 LLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSIL 214

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            G+V+     +A   F          DQ+   N V++                       
Sbjct: 215 AGYVKKGDVEEAKLIF----------DQMPQRNIVAS----------------------- 241

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
                 N+++ +  K   V    ++F +M  +D +SW+ +I+GY QN  + +AL +F  +
Sbjct: 242 ------NSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEM 295

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYG----- 407
              G+  D +++ SVL AC+ L  +   K IHG +IR G+   V L NA++ +Y      
Sbjct: 296 NANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEI 355

Query: 408 --------------------------KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
                                     KCG+++ +R +F+ +  KD+VSW+++IS Y  + 
Sbjct: 356 MDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHD 415

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
             +E L LF+ M    +  D   LVS +SA + L+ L +GK ++ +I + G  +   + +
Sbjct: 416 CFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGT 475

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           +L+DMY +CG ++ A +VFN ++ K +  W ++I    ++G  + ++D+F +M+     P
Sbjct: 476 TLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIP 535

Query: 562 DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
           + ITF+ +L AC H GL++EG+     M   + ++P  +HY C+VDLLGRA  L EA + 
Sbjct: 536 NEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKL 595

Query: 622 VRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKW 681
           + SM + P    W ALLGAC+ H + E+GE V +KL+EL P + G +VL+SN+FA+   W
Sbjct: 596 IESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDW 655

Query: 682 KDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLERE 741
           +DV +VR  M+  G+ KTPG S IE    +H F+A DK+H   +++   L E+ ++L+ E
Sbjct: 656 EDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKME 715

Query: 742 GGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSF 801
            GY   T  V  +++EEEK   L+ HSE+LAIA+G+L  +  + IRI KNLR+C DCH+ 
Sbjct: 716 -GYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTA 774

Query: 802 CKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            KL+S+ + RE+VVRD +RFH+F+ G CSC DYW
Sbjct: 775 AKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 234/520 (45%), Gaps = 97/520 (18%)

Query: 13  QLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           Q+FD++     F WN M+ AY+ +    + L  Y  M    +  D +T+P V++ACA ++
Sbjct: 96  QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VR 154

Query: 73  DLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD-------------- 117
            L+ G K IH  VLK G+DS  ++ N+L+ MYA C + R AR+LFD              
Sbjct: 155 LLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSIL 214

Query: 118 -----------------RMGEK------------------------------EDVVLWNS 130
                            +M ++                              +D+V W++
Sbjct: 215 AGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSA 274

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +IS Y  +G   EAL +F EM   G+  +    V+ L AC   S    G  IH   ++ G
Sbjct: 275 LISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMG 334

Query: 191 QNLQVYVANALIAMYA-------------------------------RCGKMTEAAGVLY 219
               V + NALI MY+                               +CG + +A  +  
Sbjct: 335 IESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFD 394

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
            +  KD VSW+++++G+ Q+D + + +  F E+Q    +PD+   V+ +SA   L  L  
Sbjct: 395 VMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQ 454

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GK +HAY  K G   ++ +G TL+DMY KC CV     VF  M  +   SW  +I G A 
Sbjct: 455 GKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAV 514

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK-EIHGYIIRKGLSDLVI 398
           N    ++L++F  ++  G+  + +    VL AC  +  + + +      I + G+   V 
Sbjct: 515 NGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVK 574

Query: 399 -LNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
               +VD+ G+ G ++ +  + ES+  + DV +W +++ +
Sbjct: 575 HYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGA 614



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 171/369 (46%), Gaps = 34/369 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           + GK G V++A +LF+++ ++ + +W+A++  Y  NG     L  +  M   G+ +D   
Sbjct: 247 LLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVV 306

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA---------------- 104
              V+ ACA L  +  G  IHGLV++ G +S   + N+L+ MY+                
Sbjct: 307 VVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSH 366

Query: 105 ---------------KCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                          KC    KAR LFD M EK D+V W+++IS Y+      E L LF 
Sbjct: 367 NLDQISWNSMISGCMKCGSVEKARALFDVMPEK-DIVSWSAVISGYAQHDCFSETLALFH 425

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EMQ   +  +    V+ + AC   +    G  +HA   K+G  + V +   L+ MY +CG
Sbjct: 426 EMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCG 485

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            +  A  V   +E K   SWN+++ G   N L  +++  F E++  G  P+++  +  + 
Sbjct: 486 CVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLG 545

Query: 270 ASGRLGNLLNGKELHAYAI-KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT-AQDF 327
           A   +G +  G+   A  I K G   +++    ++D+  +   +N   ++   M  A D 
Sbjct: 546 ACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDV 605

Query: 328 ISWTTIIAG 336
            +W  ++  
Sbjct: 606 ATWGALLGA 614



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 148/333 (44%), Gaps = 45/333 (13%)

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELH---AYAIKQGFVSDLQIGNTLMDMYAKCCCV- 312
            KP    T+        L N  N K+ +   +  I  GF+SD    + L+        + 
Sbjct: 31  HKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIG 90

Query: 313 -NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
            +Y  ++F ++   +   W T++  Y Q+N   KAL L++ +    +  D      V+ A
Sbjct: 91  LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150

Query: 372 CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           C+        KEIH ++++ G  SD+ + N ++++Y  CGN+  +R +F+     D VSW
Sbjct: 151 CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 210

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
            S+++ YV  G   EA  +F  M + N+ +                              
Sbjct: 211 NSILAGYVKKGDVEEAKLIFDQMPQRNIVA------------------------------ 240

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
                    ++S++ +  + G +  A K+FN +  KD++ W+++I+    +G  + A+ +
Sbjct: 241 ---------SNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVM 291

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           F +M A     D +  +++L AC+H  ++  GK
Sbjct: 292 FIEMNANGMRLDEVVVVSVLSACAHLSIVKTGK 324



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 1/140 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V +A ++F+ + ++ V +WNA++     NG   R L+ +S M+  G+  +  T
Sbjct: 480 MYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEIT 539

Query: 61  FPCVIKACAMLKDLDCG-AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC  +  +D G      ++ K G +        +V +  +     +A +L + M
Sbjct: 540 FMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESM 599

Query: 120 GEKEDVVLWNSIISAYSASG 139
               DV  W +++ A    G
Sbjct: 600 PMAPDVATWGALLGACKKHG 619


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/753 (34%), Positives = 424/753 (56%), Gaps = 7/753 (0%)

Query: 6    GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
            G + DA  LF ++    V  WN M+  +V  G  +  ++ +  M   G+     T   V+
Sbjct: 297  GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVL 356

Query: 66   KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
             A A L+ L+ G  +H   +K G +S  ++ +SL+ MYAKC     A+++FD + E+ ++
Sbjct: 357  SAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDER-NL 415

Query: 126  VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
            VLWN+++  Y+ +G   + + LF EM+  G   + +T+ + L AC       +G ++H+ 
Sbjct: 416  VLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSF 475

Query: 186  TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
             +K      ++V N L+ MYA+CG + EA      + N+D+VSWN+++ G+VQ +   +A
Sbjct: 476  IIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEA 535

Query: 246  MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
               FR +   G  PD+V   + +S    L  L  G+++H + +K G  + L  G++L+DM
Sbjct: 536  FNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDM 595

Query: 306  YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
            Y KC  +     VF  M ++  +S   IIAGYAQN+  ++A++LF+ +Q EGL+   +  
Sbjct: 596  YVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITF 654

Query: 366  GSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
             S+L AC+G   ++  ++IH  I ++GL    D + ++ +V         D      E  
Sbjct: 655  ASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQ 714

Query: 423  ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
              K  + WT++IS +  NG + EAL+L+  M+  N   D  T  S L A S L+ L  G+
Sbjct: 715  YPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGR 774

Query: 483  ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLH 541
             ++  I   G + +    S++VDMYA+CG +  + +VF  + +K D+I W SMI     +
Sbjct: 775  MIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKN 834

Query: 542  GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
            G  + A+ +F +M+     PD +TFL +L ACSH+G ++EG++  +IM   Y++ P  +H
Sbjct: 835  GYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDH 894

Query: 602  YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
             AC++DLLGR   L+EA +F+  +  EP A +W  LLGACR+H +   G   A+KL+EL+
Sbjct: 895  CACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELE 954

Query: 662  PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
            P N   YVL+SN++AAS  W +V  VR  MR  GL+K PG SWI +G K + F+A DK H
Sbjct: 955  PENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFH 1014

Query: 722  SESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
              + EI+  L ++   L +E GY+A+T  +L +
Sbjct: 1015 PSAGEIHALLKDLI-ALMKEDGYIAETDSLLED 1046



 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 181/585 (30%), Positives = 318/585 (54%), Gaps = 38/585 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG+V  A + F+++ +R +  WN++L  Y   G   +V+  +  ++  G+S + FT
Sbjct: 125 LYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFT 184

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+ +CA L D+D G ++H  V+K G++   F   SL+ MY+KC     AR++FD + 
Sbjct: 185 YAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVV 244

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  D V W ++I+ Y   G   EAL +F +MQ++GLV +   FV  + AC       +G+
Sbjct: 245 DP-DTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITAC-------VGL 296

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                                       G++ +A  +  Q+ N + V+WN M++G V+  
Sbjct: 297 ----------------------------GRLDDACDLFVQMPNTNVVAWNVMISGHVKRG 328

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+ FF+ +   G K  +    + +SA   L  L  G  +HA AIKQG  S++ +G+
Sbjct: 329 CDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGS 388

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L++MYAKC  +    +VF  +  ++ + W  ++ GYAQN    K ++LF  ++  G   
Sbjct: 389 SLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWP 448

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D     S+L AC+ L+C+   +++H +II+     +L + N +VD+Y KCG ++ +R  F
Sbjct: 449 DEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQF 508

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E I ++D VSW ++I  YV     +EA  +F  M    +  D ++L S LS  ++L  L+
Sbjct: 509 EFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALE 568

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +G++++ F+++ G        SSL+DMY +CGA++ A  VF+C+ ++ ++   ++I    
Sbjct: 569 QGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYA 628

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            +   + AIDLF +M+ E   P  ITF +LL AC+    +N G++
Sbjct: 629 QNDLVE-AIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQ 672



 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 181/584 (30%), Positives = 306/584 (52%), Gaps = 15/584 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  A+++FD + +R +  WNAMLG Y  NG   +V++ +S MR  G   D FT
Sbjct: 393 MYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFT 452

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++ ACA L+ L+ G ++H  ++K  ++   F+ N+LV MYAKC    +ARQ F+ + 
Sbjct: 453 YTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIR 512

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +++V  WN+II  Y       EA  +FR M   G+  +  +  + L  C +      G 
Sbjct: 513 NRDNVS-WNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGE 571

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   VKSG    +Y  ++LI MY +CG +  A  V   + ++  VS N+++ G+ QND
Sbjct: 572 QVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQND 631

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ-IG 299
           L  +A+  F+E+Q  G  P ++   + + A      L  G+++H    K+G + D   +G
Sbjct: 632 L-VEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLG 690

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            +L+ MY           +F +    +  I WT II+G+ QN C  +AL+L++ +     
Sbjct: 691 VSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNA 750

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D     SVL ACS L  +   + IH  I   GL SD +  +A+VD+Y KCG++  S  
Sbjct: 751 RPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQ 810

Query: 418 VFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           VFE + SK DV+SW SMI  +  NG A  AL++F  M    +  D +T +  L+A S   
Sbjct: 811 VFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAG 870

Query: 477 ILKKGKELNGFIIRKGFNLEGSV--ASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTS 533
            + +G+E+   ++   + +   +   + ++D+  R G L  A +  + +    + ++W +
Sbjct: 871 RVSEGREIFDIMVHS-YKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWAT 929

Query: 534 MINANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           ++ A  +HG   RG+ A +   ++E E+ +P     L+ +YA S
Sbjct: 930 LLGACRIHGDDIRGRRAAEKLIELEPENSSP--YVLLSNIYAAS 971



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 267/506 (52%), Gaps = 37/506 (7%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           IH   LK G+ S   + +++V +YAKC +   A + F+++ EK D++ WNS++S YS  G
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQL-EKRDILAWNSVLSMYSRQG 161

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
              + +  F  +Q  G+  N +T+   L +C       LG ++H   +K G     +   
Sbjct: 162 SLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEG 221

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP 259
           +LI MY++CG + +A  +   + + D+VSW +M+ G+VQ  L  +A++ F ++Q  G  P
Sbjct: 222 SLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVP 281

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           DQV  V  ++A   LG L +  +L                                   F
Sbjct: 282 DQVAFVTVITACVGLGRLDDACDL-----------------------------------F 306

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
            QM   + ++W  +I+G+ +  C ++A++ F+ +   G+ +    +GSVL A + L+ ++
Sbjct: 307 VQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALN 366

Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
               +H   I++GL S++ + ++++++Y KC  ++ ++ VF++++ +++V W +M+  Y 
Sbjct: 367 YGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYA 426

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NG A++ ++LF  M       D  T  S LSA + L  L+ G++L+ FII+  F     
Sbjct: 427 QNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLF 486

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           V ++LVDMYA+CGAL+ A + F  ++ +D + W ++I           A ++F +M  + 
Sbjct: 487 VENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDG 546

Query: 559 FAPDHITFLALLYACSHSGLINEGKK 584
            APD ++  ++L  C++   + +G++
Sbjct: 547 IAPDEVSLASILSGCANLQALEQGEQ 572



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 230/447 (51%), Gaps = 40/447 (8%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IHA T+K G   +  + +A++ +YA+CG +  AA    QLE +D ++WNS+L+ + +   
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGS 162

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             + +  F  LQ  G  P+Q      +S+  RL ++  GK++H   IK GF  +     +
Sbjct: 163 LEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGS 222

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMY+KC  +    ++F  +   D +SWT +IAGY Q     +AL++F  +Q  GL  D
Sbjct: 223 LIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPD 282

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES 421
            +   +V+ AC GL                                  G +D + ++F  
Sbjct: 283 QVAFVTVITACVGL----------------------------------GRLDDACDLFVQ 308

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           + + +VV+W  MIS +V  G   EA++ F  M +  V+S   TL S LSA +SL  L  G
Sbjct: 309 MPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYG 368

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
             ++   I++G N    V SSL++MYA+C  ++ A KVF+ +  ++L+LW +M+     +
Sbjct: 369 LLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQN 428

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPE 600
           G     + LF +M    F PD  T+ ++L AC+    +  G++    I++ +++ + + E
Sbjct: 429 GYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVE 488

Query: 601 HYACLVDLLGRANHLEEA---YQFVRS 624
           +   LVD+  +   LEEA   ++F+R+
Sbjct: 489 N--TLVDMYAKCGALEEARQQFEFIRN 513



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 1/203 (0%)

Query: 381 TKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
           +K IH   ++ G  S   + +AIVD+Y KCGN++++   F  +E +D+++W S++S Y  
Sbjct: 100 SKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSR 159

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
            G   + +  F  +    V  +  T    LS+ + L  +  GK+++  +I+ GF      
Sbjct: 160 QGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFC 219

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
             SL+DMY++CG+L  A K+F+ V   D + WT+MI      G  + A+ +F  M+    
Sbjct: 220 EGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGL 279

Query: 560 APDHITFLALLYACSHSGLINEG 582
            PD + F+ ++ AC   G +++ 
Sbjct: 280 VPDQVAFVTVITACVGLGRLDDA 302



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 86/163 (52%), Gaps = 4/163 (2%)

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           +  K ++   ++ GF  +G + S++VD+YA+CG ++ A K FN ++ +D++ W S+++  
Sbjct: 98  RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDP 597
              G  +  I  F  ++    +P+  T+  +L +C+    I+ GK+    +++  ++ + 
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           + E    L+D+  +   L +A +   ++ ++P    W A++  
Sbjct: 218 FCE--GSLIDMYSKCGSLVDARKIFDAV-VDPDTVSWTAMIAG 257


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/670 (37%), Positives = 394/670 (58%), Gaps = 5/670 (0%)

Query: 52  LGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
           +G+ +D  TFP V+KACA    +  G +IHG+V K G+DS  F+ N+L+  Y  C   + 
Sbjct: 1   MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQAC 170
            +++FD M E+ DVV WNS+I  +S  G   EA+ LF EM  R G   N  + V+ L  C
Sbjct: 61  VKRVFDEMLER-DVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVC 119

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
                   G +IH   VK+G + QV V NAL+ +Y +CG + ++  V  ++  ++ VSWN
Sbjct: 120 AGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWN 179

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           +++T     +    A++ FR +   G KP+ V   + +     L     GKE+H ++++ 
Sbjct: 180 AIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRF 239

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G  SD+ + N L+DMYAK         VF Q+  ++ +SW  ++A +AQN   L A++L 
Sbjct: 240 GLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLV 299

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
           R +Q +G   + +   +VL AC+ +  +   KEIH   IR G S DL + NA+ D+Y KC
Sbjct: 300 RQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKC 359

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G ++ +R VF+ I  +D VS+  +I  Y      +E+L LF  M    ++ D ++ +  +
Sbjct: 360 GCLNLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVI 418

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           SA ++L+ LK+GKE++G  +RK  +    +A++L+D Y +CG +D+A KVF  + ++D  
Sbjct: 419 SACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTA 478

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            W SMI   G+ G   +AI+LF  M+ +    D ++++A+L ACSH GL+ EGKK+ E M
Sbjct: 479 SWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHM 538

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
           +    + P   HYAC+VDLLGRA  +EEA + + S+ IEP A VW ALLGACR+H   EL
Sbjct: 539 QVQ-NIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIEL 597

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
               A+ L +L P + G Y ++SN++A + KW +  QVR  M+  G KK PG SW++I N
Sbjct: 598 AHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDN 657

Query: 710 KIHSFIARDK 719
           ++H+F+A ++
Sbjct: 658 QVHAFVAGER 667



 Score =  325 bits (832), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 188/544 (34%), Positives = 304/544 (55%), Gaps = 5/544 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAFT 60
           YG CG + D +++FD++ +R V +WN+++G +  +G     +  +  M +  G   +  +
Sbjct: 52  YGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVS 111

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+  CA L+D   G +IH  V+K G DS   + N+LV +Y KC   + +R++FD + 
Sbjct: 112 IVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEIS 171

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+  V  WN+II++ +   +  +AL +FR M   G+  N+ TF + L    +      G 
Sbjct: 172 ERNGVS-WNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGK 230

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH  +++ G    ++VANALI MYA+ G+  +A+ V  Q+  K+ VSWN+M+  F QN 
Sbjct: 231 EIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNR 290

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L   A+   R++Q  G+ P+ V   N + A  R+G L  GKE+HA AI+ G   DL + N
Sbjct: 291 LELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSN 350

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L DMYAKC C+N   RVF +++ +D +S+  +I GY+Q     ++L LF  + ++G+  
Sbjct: 351 ALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKL 409

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           DV+    V+ AC+ L  + Q KE+HG  +RK L + L I NA++D Y KCG ID +  VF
Sbjct: 410 DVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVF 469

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I S+D  SW SMI  Y   G    A+ LF  M E  VE DS++ ++ LSA S   +++
Sbjct: 470 RQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVE 529

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINAN 538
           +GK+    +  +         + +VD+  R G ++ A K+   +  + D  +W +++ A 
Sbjct: 530 EGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGAC 589

Query: 539 GLHG 542
            +HG
Sbjct: 590 RIHG 593



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 243/438 (55%), Gaps = 4/438 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGKCG V D+ ++FD++S+R   +WNA++ +          LE +  M   G+  ++ T
Sbjct: 153 VYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVT 212

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++     LK  D G +IHG  L+ G +S  F+ N+L+ MYAK     +A  +F+++G
Sbjct: 213 FSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIG 272

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK ++V WN++++ ++ +   L A+ L R+MQ  G + N+ TF   L AC    F   G 
Sbjct: 273 EK-NIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGK 331

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIHA  +++G ++ ++V+NAL  MYA+CG +  A  V +++  +D VS+N ++ G+ Q  
Sbjct: 332 EIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRV-FKISLRDEVSYNILIIGYSQTT 390

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              ++++ F E+   G K D V  +  +SA   L  L  GKE+H  A+++   + L I N
Sbjct: 391 NCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIAN 450

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D Y KC  ++  G+VF Q+ ++D  SW ++I GY        A+ LF  ++ +G++ 
Sbjct: 451 ALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEY 510

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVF 419
           D +   +VL ACS    + + K+   ++  + +    +  A +VD+ G+ G I+ +  + 
Sbjct: 511 DSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLI 570

Query: 420 ESIE-SKDVVSWTSMISS 436
           ES+    D   W +++ +
Sbjct: 571 ESLPIEPDANVWGALLGA 588


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/627 (38%), Positives = 389/627 (62%), Gaps = 6/627 (0%)

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V  ++  ++ V+W  M+T F Q      A+  F +++ +G  PD+    + +SA   
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC---VNYMGRVFYQMTAQDFISW 330
           LG L  GK+LH+  I+ G   D+ +G +L+DMYAKC     V+   +VF QM   + +SW
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 331 TTIIAGYAQN-NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           T II  YAQ+  C  +A+ELF  +    +  +     SVL AC  L      ++++ Y +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 390 RKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           + G++ +  + N+++ +Y + G ++ +R  F+ +  K++VS+ +++  Y  N  + EA  
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           LF  + +  +   + T  S LS A+S+  + KG++++G +++ G+     + ++L+ MY+
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           RCG ++ A +VFN ++ +++I WTSMI     HG    A+++F+KM      P+ IT++A
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L ACSH G+I+EG+K    M  ++ + P  EHYAC+VDLLGR+  L EA +F+ SM + 
Sbjct: 369 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 428

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
             A VW  LLGACRVH N ELG   A+ +LE +P +P  Y+L+SN+ A++ +WKDV ++R
Sbjct: 429 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 488

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
             M+   L K  G SWIE+ N++H F   + SH ++ +IY++L ++  K+ +E GY+  T
Sbjct: 489 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKI-KEMGYIPDT 547

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
            FVLH++EEE+K Q L+ HSE++A+A+G++ +++   IRI KNLRVC DCH+  K +S  
Sbjct: 548 DFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMA 607

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
            GRE+VVRD+NRFHH + GVCSC DYW
Sbjct: 608 TGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 253/502 (50%), Gaps = 30/502 (5%)

Query: 6   GSVL--DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           GSV+   A ++FDK+ +R + TW  M+  +   G     ++ +  M + G   D FT+  
Sbjct: 2   GSVIWAPAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 61

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY---DFRKARQLFDRMG 120
           V+ AC  L  L  G ++H  V++ G      +  SLV MYAKC        +R++F++M 
Sbjct: 62  VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 121

Query: 121 EKEDVVLWNSIISAYSASGQC-LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           E  +V+ W +II+AY+ SG+C  EA+ LF +M    +  N ++F + L+AC + S    G
Sbjct: 122 E-HNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTG 180

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++++  VK G      V N+LI+MYAR G+M +A      L  K+ VS+N+++ G+ +N
Sbjct: 181 EQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKN 240

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A   F E+   G         + +S +  +G +  G+++H   +K G+ S+  I 
Sbjct: 241 LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCIC 300

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+ MY++C  +    +VF +M  ++ ISWT++I G+A++    +ALE+F  +   G  
Sbjct: 301 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 360

Query: 360 ADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
            + +   +VL ACS       G K  +   + HG + R     +     +VD+ G+ G +
Sbjct: 361 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR-----MEHYACMVDLLGRSGLL 415

Query: 413 DYSRNVFESIE-SKDVVSWTSMISS-YVHNG--LANEALELFYLMNEANVESDSITLVSA 468
             +     S+    D + W +++ +  VH    L   A E+  ++ +   +  +  L+S 
Sbjct: 416 VEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEM--ILEQEPDDPAAYILLSN 473

Query: 469 LSAASS-----LSILKKGKELN 485
           L A++      + I K  KE N
Sbjct: 474 LHASAGQWKDVVKIRKSMKERN 495



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 119/235 (50%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + G + DA + FD + ++ + ++NA++  Y  N +       ++ +   GI + AFT
Sbjct: 205 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 264

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++   A +  +  G +IHG +LK GY S   I N+L++MY++C +   A Q+F+ M 
Sbjct: 265 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM- 323

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  +V+ W S+I+ ++  G    AL +F +M   G   N  T+VA L AC      + G 
Sbjct: 324 EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 383

Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           +   +  K  G   ++     ++ +  R G + EA   +  +    D++ W ++L
Sbjct: 384 KHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 438


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/726 (34%), Positives = 414/726 (57%), Gaps = 8/726 (1%)

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            N++++ Y K  D   AR LFD M ++  VV W  ++  Y+ +    EA  LFR+M R  
Sbjct: 78  TNTMISGYVKMGDLSSARHLFDAMPDRT-VVTWTILMGWYAGNNHFDEAFKLFRQMCRSC 136

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG--QNLQVYVANALIAMYARCGKMTE 213
            + +  TF   L  C D+  +    ++HA  VK G   NL + V N L+  Y    ++  
Sbjct: 137 TLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDL 196

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +  ++ +KDSV++N+++TG+ ++ LY +A+  F +++ +G KP        + A   
Sbjct: 197 ACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVG 256

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           L +   G++LH  ++  GF  D  +GN ++  Y+K   V     +F +M   DF+S+  +
Sbjct: 257 LHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVV 316

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH-GYIIRKG 392
           I+ Y+Q   + ++L LFR +Q  G D       ++L   + L  +   +++H   I+   
Sbjct: 317 ISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATA 376

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
            S L + N++VD+Y KC   D +  +F+S+  +  VSWT++IS YV  GL    L+LF  
Sbjct: 377 DSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTK 436

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS-LVDMYARCG 511
           M  AN+ +D  T  + L A++  + L  GK+L+ FIIR G NLE   + S LVDMYA+CG
Sbjct: 437 MRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKCG 495

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
           ++  A +VF  +  ++ + W ++I+A   +G G+ AI  F KM      PD ++ L +L 
Sbjct: 496 SIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLI 555

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           ACSH G + +G +F + M   Y + P  +HYAC++DLLGR     EA + +  M  EP  
Sbjct: 556 ACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDE 615

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDP-GNPGNYVLISNVFAASRKWKDVEQVRMR 690
            +W ++L ACR++ N+ L E  A++L  ++   +   YV +SN++AA+ KW++V  V+  
Sbjct: 616 IMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKA 675

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
           MR  G+KK P  SW+E+ +KIH F + D++H   DEI KK+ E+T ++ERE GY   T  
Sbjct: 676 MRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIERE-GYKPDTSS 734

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
           V+ +++E+ K++ L  HSERLA+A+ ++ + EG  I + KNLR C DCH+  KL+S++  
Sbjct: 735 VVQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVK 794

Query: 811 RELVVR 816
           R +  +
Sbjct: 795 RVITTQ 800



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 271/541 (50%), Gaps = 6/541 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +  A  LFD +  RTV TW  ++G Y  N       + + +M       D  TF
Sbjct: 85  YVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTF 144

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV--NSLVAMYAKCYDFRKARQLFDRM 119
             ++  C      +   ++H   +K G+D+  F+   N L+  Y +      A  LF+ +
Sbjct: 145 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEI 204

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +K D V +N++I+ Y   G   EA+ LF +M++ G   + +TF   L+A        LG
Sbjct: 205 LDK-DSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALG 263

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H  +V +G +    V N ++  Y++  ++ E   +  ++   D VS+N +++ + Q 
Sbjct: 264 QQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQA 323

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           + Y +++  FRE+Q  G           +S +  L +L  G+++H  AI     S L +G
Sbjct: 324 EQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVG 383

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+DMYAKC   +    +F  ++ +  +SWT +I+GY Q   H   L+LF  ++   L 
Sbjct: 384 NSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLR 443

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNV 418
           AD     +VL A +G   +   K++H +IIR G L ++   + +VD+Y KCG+I  +  V
Sbjct: 444 ADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 503

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           FE +  ++ VSW ++IS+Y  NG    A+  F  M ++ ++ DS++++  L A S    +
Sbjct: 504 FEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFV 563

Query: 479 KKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
           ++G E         G   +    + ++D+  R G    A K+ + +    D I+W+S++N
Sbjct: 564 EQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLN 623

Query: 537 A 537
           A
Sbjct: 624 A 624



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 235/470 (50%), Gaps = 17/470 (3%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           LF+++  +   T+N ++  Y  +G     +  + +MR  G     FTF  V+KA   L D
Sbjct: 200 LFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHD 259

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
              G ++HGL +  G+     + N ++  Y+K     + R LF+ M E  D V +N +IS
Sbjct: 260 FALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPEL-DFVSYNVVIS 318

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
           +YS + Q  E+L LFREMQ +G     + F   L    + S   +G ++H   + +  + 
Sbjct: 319 SYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADS 378

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            ++V N+L+ MYA+C    EA  +   L  + +VSW ++++G+VQ  L+   ++ F +++
Sbjct: 379 ILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMR 438

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
           GA  + DQ      + AS    +LL GK+LHA+ I+ G + ++  G+ L+DMYAKC  + 
Sbjct: 439 GANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 498

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
              +VF +M  ++ +SW  +I+ YA N     A+  F  +   GL  D + I  VL+ACS
Sbjct: 499 DAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACS 558

Query: 374 -------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SK 425
                  G +       I+G   +K          ++D+ G+ G    +  + + +    
Sbjct: 559 HCGFVEQGTEFFQAMSPIYGITPKKKH-----YACMLDLLGRNGRFAEAEKLMDEMPFEP 613

Query: 426 DVVSWTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D + W+S++++   Y +  LA  A E  + M +    +  +++ +  +AA
Sbjct: 614 DEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAA 663



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC    +AE +F  +SQR+  +W A++  YV  G     L+ +++MR   +  D  T
Sbjct: 389 MYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQST 448

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+KA A    L  G ++H  +++ G     F  + LV MYAKC   + A Q+F+ M 
Sbjct: 449 FATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 508

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ + V WN++ISAY+ +G    A+G F +M + GL  ++ + +  L AC    F   G 
Sbjct: 509 DR-NAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGT 567

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           E   A +   G   +      ++ +  R G+  EA  ++ ++    D + W+S+L
Sbjct: 568 EFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 622



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 2/180 (1%)

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           + V  N ++  Y K G++  +R++F+++  + VV+WT ++  Y  N   +EA +LF  M 
Sbjct: 74  NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF--NLEGSVASSLVDMYARCGA 512
            +    D +T  + L   +         +++ F ++ GF  NL  +V + L+  Y     
Sbjct: 134 RSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRR 193

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           LD+A  +F  +  KD + + ++I      G    AI LF KM      P   TF  +L A
Sbjct: 194 LDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/744 (34%), Positives = 424/744 (56%), Gaps = 8/744 (1%)

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            N+++  Y K  +   AR LFD M ++  VV W  +I  Y+   + LEA  LF +M R G
Sbjct: 76  TNTMIMGYLKSGNLSTARSLFDSMVQRS-VVTWTMLIGGYAQHNRFLEAFNLFADMCRHG 134

Query: 156 LVTNAYTFVAALQACEDSSFETLG--MEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
           +V +  T    L     + FE++    ++H   VK G +  + V N+L+  Y +   +  
Sbjct: 135 MVPDHITLATLLSGF--TEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGL 192

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +   +  KD+V++N++LTG+ +      A+  F ++Q  G +P +      ++A  +
Sbjct: 193 ACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQ 252

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           + ++  G+++H++ +K  FV ++ + N L+D Y+K   +    ++FY+M   D IS+  +
Sbjct: 253 MDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVL 312

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY-IIRKG 392
           I   A N    ++LELFR +Q    D       ++L   +    +   ++IH   I+   
Sbjct: 313 ITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDA 372

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
           +S++++ N++VD+Y KC     +  +F  +  +  V WT++IS YV  GL  + L+LF  
Sbjct: 373 ISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVE 432

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M+ A + +DS T  S L A ++L+ L  GK+L+  IIR G        S+LVDMYA+CG+
Sbjct: 433 MHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGS 492

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +  A ++F  +  ++ + W ++I+A   +G G  A+  F +M      P+ ++FL++L A
Sbjct: 493 IKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCA 552

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CSH GL+ EG ++   M   Y+L+P  EHYA +VD+L R+   +EA + +  M  EP   
Sbjct: 553 CSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEI 612

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDP-GNPGNYVLISNVFAASRKWKDVEQVRMRM 691
           +W ++L +CR+H N+EL    A +L  +    +   YV +SN++AA+ +W  V +V+  +
Sbjct: 613 MWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKAL 672

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           R  G++K P  SW+EI  K H F A D SH ++ EI +KL E+ +++E E GY   +   
Sbjct: 673 RERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQME-EQGYKPDSTCA 731

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           LHNV+EE KV+ L  HSER+AIA+ ++ + +GS I + KNLR C DCH+  K++S++  R
Sbjct: 732 LHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNR 791

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E+ VRD++RFHHF  G CSC DYW
Sbjct: 792 EITVRDSSRFHHFTDGSCSCKDYW 815



 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 176/579 (30%), Positives = 303/579 (52%), Gaps = 8/579 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G++  A  LFD + QR+V TW  ++G Y  +   L     ++ M   G+  D  T 
Sbjct: 83  YLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITL 142

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++      + ++  A++HG V+K GYDST  + NSL+  Y K      A  LF  M E
Sbjct: 143 ATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAE 202

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K++V  +N++++ YS  G   +A+ LF +MQ +G   + +TF A L A         G +
Sbjct: 203 KDNVT-FNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQ 261

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H+  VK      V+VANAL+  Y++  ++ EA  + Y++   D +S+N ++T    N  
Sbjct: 262 VHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGR 321

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             ++++ FRELQ       Q      +S +    NL  G+++H+ AI    +S++ +GN+
Sbjct: 322 VEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNS 381

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC       R+F  +  Q  + WT +I+GY Q   H   L+LF  +    + AD
Sbjct: 382 LVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGAD 441

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFE 420
                S+L AC+ L  ++  K++H  IIR G LS++   +A+VD+Y KCG+I  +  +F+
Sbjct: 442 SATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQ 501

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  ++ VSW ++IS+Y  NG    AL  F  M  + ++ +S++ +S L A S   ++++
Sbjct: 502 EMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEE 561

Query: 481 GKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINAN 538
           G +  N               +S+VDM  R G  D A K+   +    D I+W+S++N+ 
Sbjct: 562 GLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSC 621

Query: 539 GLHGRGKVAI---DLFYKMEAESFAPDHITFLALLYACS 574
            +H   ++AI   D  + M+    A  +++ ++ +YA +
Sbjct: 622 RIHKNQELAIKAADQLFNMKGLRDAAPYVS-MSNIYAAA 659



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 213/451 (47%), Gaps = 11/451 (2%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V   N +I  Y + G ++ A  +   +  +  V+W  ++ G+ Q++ + +A   F ++  
Sbjct: 73  VISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCR 132

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G  PD +     +S      ++    ++H + +K G+ S L + N+L+D Y K   +  
Sbjct: 133 HGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGL 192

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
              +F  M  +D +++  ++ GY++   +  A+ LF  +Q  G         +VL A   
Sbjct: 193 ACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQ 252

Query: 375 LKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +  +   +++H ++++     ++ + NA++D Y K   I  +R +F  +   D +S+  +
Sbjct: 253 MDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVL 312

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I+    NG   E+LELF  +     +       + LS A++   L+ G++++   I    
Sbjct: 313 ITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDA 372

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---NGLHGRGKVAIDL 550
             E  V +SLVDMYA+C     AN++F  +  +  + WT++I+     GLH  G   + L
Sbjct: 373 ISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDG---LKL 429

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLL 609
           F +M       D  T+ ++L AC++   +  GK+    I+R     + +    + LVD+ 
Sbjct: 430 FVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSG--SALVDMY 487

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            +   ++EA Q  + M +  +   W AL+ A
Sbjct: 488 AKCGSIKEALQMFQEMPVRNSVS-WNALISA 517



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 18/283 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC    +A ++F  ++ ++   W A++  YV  G     L+ +  M    I  D+ T
Sbjct: 385 MYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSAT 444

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +++ACA L  L  G ++H  +++ G  S  F  ++LV MYAKC   ++A Q+F  M 
Sbjct: 445 YASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMP 504

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  V  WN++ISAY+ +G    AL  F +M   GL  N+ +F++ L AC        G+
Sbjct: 505 VRNSVS-WNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGL 563

Query: 181 EIHAATVKSGQNLQVYVAN-------ALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSM 232
           +   +        QVY          +++ M  R G+  EA  ++ ++    D + W+S+
Sbjct: 564 QYFNSMT------QVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSI 617

Query: 233 LTG---FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
           L         +L  KA      ++G       V   N  +A+G
Sbjct: 618 LNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAG 660



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/347 (21%), Positives = 164/347 (47%), Gaps = 36/347 (10%)

Query: 274 LGNLLNGK----ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           LG L + K     + A  IK GF  +    N  +  + +   +    ++F +M  ++ IS
Sbjct: 16  LGTLTSPKRHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVIS 75

Query: 330 WTT-------------------------------IIAGYAQNNCHLKALELFRTVQLEGL 358
             T                               +I GYAQ+N  L+A  LF  +   G+
Sbjct: 76  TNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGM 135

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D + + ++L   +  + +++  ++HG++++ G  S L++ N+++D Y K  ++  + +
Sbjct: 136 VPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACH 195

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F+ +  KD V++ ++++ Y   G  ++A+ LF+ M +        T  + L+A   +  
Sbjct: 196 LFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDD 255

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           ++ G++++ F+++  F     VA++L+D Y++   +  A K+F  +   D I +  +I  
Sbjct: 256 IEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITC 315

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
              +GR + +++LF +++   F      F  LL   ++S  +  G++
Sbjct: 316 CAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQ 362



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 118/232 (50%), Gaps = 3/232 (1%)

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           +++  N ++  Y K GN+  +R++F+S+  + VV+WT +I  Y  +    EA  LF  M 
Sbjct: 72  NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              +  D ITL + LS  +    + +  +++G +++ G++    V +SL+D Y +  +L 
Sbjct: 132 RHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLG 191

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +A  +F  +  KD + + +++      G    AI+LF+KM+   F P   TF A+L A  
Sbjct: 192 LACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGI 251

Query: 575 HSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
               I  G++    +++C++  + +  +   L+D   + + + EA +    M
Sbjct: 252 QMDDIEFGQQVHSFVVKCNFVWNVFVAN--ALLDFYSKHDRIVEARKLFYEM 301


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/749 (34%), Positives = 418/749 (55%), Gaps = 8/749 (1%)

Query: 1    MYGKCGSVLDAEQLFDKVSQR-----TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS 55
            MY KCG +  A Q+FDK+S+       +  WN ++  Y   G     L  + RM+ LGI 
Sbjct: 485  MYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIR 544

Query: 56   VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
             D ++   V+  C  L     G +IHG +++  ++   ++  +L+ MY+ C    +A  L
Sbjct: 545  PDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSL 604

Query: 116  FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
            F ++  + ++V WN +I  +  +G   ++L L+   +       + +F  A  AC     
Sbjct: 605  FGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEV 664

Query: 176  ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
               G ++H   +K       YV  +L+ MYA+ G + +A  V  Q+ +K+    N+M++ 
Sbjct: 665  LDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISA 724

Query: 236  FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV-SASGRLGNLLNGKELHAYAIKQGFVS 294
            F+ N     A+  + +++ AG+ P    T++++ S    +G+   G+ +HA  IK+   S
Sbjct: 725  FIGNGRAYDALGLYNKMK-AGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQS 783

Query: 295  DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
            ++ I + L+ MY KC        VFY M  +D ++W ++IAG+ QN     AL+LFR ++
Sbjct: 784  NVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAME 843

Query: 355  LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
             EG+ AD  ++ SV+ A  GL+ +     IHG+ I++GL SD+ +  ++VD+Y K G  +
Sbjct: 844  KEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAE 903

Query: 414  YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
             +  VF S+ +K++V+W SMIS Y  NGL   ++ L   + +     DS+++ + L A S
Sbjct: 904  SAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVS 963

Query: 474  SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            S++ L KGK L+ + IR     +  V ++L+DMY +CG L  A  +F  +  ++L+ W S
Sbjct: 964  SVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNS 1023

Query: 534  MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
            MI   G HG  + A+ LF +M+    APD +TFLAL+ +CSHSG++ EG    ++MR +Y
Sbjct: 1024 MIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEY 1083

Query: 594  QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
             ++P  EHYA +VDLLGRA  L++AY F+R M I+    VW  LL ACR H N ELGE+V
Sbjct: 1084 GVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELV 1143

Query: 654  AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHS 713
            A  LL+++P    NYV + N++     W     +R  M+G GLKK+PG SWIE+ N++  
Sbjct: 1144 ADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDV 1203

Query: 714  FIARDKSHSESDEIYKKLAEITEKLEREG 742
            F + D S +   EIYK L+ +   +E +G
Sbjct: 1204 FFSGDSSSTRRIEIYKTLSSLKSNMEGKG 1232



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 168/561 (29%), Positives = 290/561 (51%), Gaps = 8/561 (1%)

Query: 32  AYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDS 91
           A V  G+  + LE +S+     ++   FTFP ++K CA L +L  G  IH  ++  G  S
Sbjct: 415 ALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQS 474

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRMGEK----EDVVLWNSIISAYSASGQCLEALGL 147
             +I  SL+ MY KC     A Q+FD+M E      D+ +WN +I  Y   G   E L  
Sbjct: 475 DPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQ 534

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           F  MQ +G+  + Y+    L  C   S+   G +IH   +++      Y+  ALI MY+ 
Sbjct: 535 FCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSS 594

Query: 208 CGKMTEAAGVLYQLENKDS-VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           C +  EA  +  +LEN+ + V+WN M+ GFV+N ++ K+++ +   +    K        
Sbjct: 595 CSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTG 654

Query: 267 AVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           A +A    G +L+ G+++H   IK  F  D  +  +L+ MYAK   V    +VF Q+  +
Sbjct: 655 AFTACSH-GEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDK 713

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           +      +I+ +  N     AL L+  ++      D   I S+L  CS +      + +H
Sbjct: 714 EVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVH 773

Query: 386 GYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
             +I++ + S++ I +A++ +Y KCG+ + + +VF +++ +DVV+W SMI+ +  N    
Sbjct: 774 AEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFK 833

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           +AL+LF  M +  V++DS  + S +SA   L  ++ G  ++GF I++G   +  VA SLV
Sbjct: 834 DALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLV 893

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMY++ G  + A  VF+ +  K+L+ W SMI+    +G  +++I+L  ++    F  D +
Sbjct: 894 DMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSV 953

Query: 565 TFLALLYACSHSGLINEGKKF 585
           +   +L A S    + +GK  
Sbjct: 954 SITTVLVAVSSVAALLKGKTL 974



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 217/448 (48%), Gaps = 7/448 (1%)

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           I A    G+  +AL L  +     L T  +TF + L+ C   S    G  IHA+ V  G 
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQL-ENKDSVS----WNSMLTGFVQNDLYCKAM 246
               Y+A +LI MY +CG +  A  V  ++ E++DS      WN ++ G+ +   + + +
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
             F  +Q  G +PD       +    RL   + G+++H Y I+  F  D  +   L+ MY
Sbjct: 533 AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 592

Query: 307 AKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
           + C        +F ++  + + ++W  +I G+ +N    K+LEL+   + E         
Sbjct: 593 SSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASF 652

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIES 424
                ACS  + +   +++H  +I+     D  +  +++ +Y K G+++ ++ VF+ +  
Sbjct: 653 TGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 712

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           K+V    +MIS+++ NG A +AL L+  M       DS T+ S LS  S +     G+ +
Sbjct: 713 KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTV 772

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +  +I++      ++ S+L+ MY +CG+ + A+ VF  ++ +D++ W SMI     + R 
Sbjct: 773 HAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRF 832

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYA 572
           K A+DLF  ME E    D     +++ A
Sbjct: 833 KDALDLFRAMEKEGVKADSDVMTSVISA 860



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 8/212 (3%)

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I + V  G  ++ALEL      + + +   T  S L   +SLS L  G+ ++  I+  G 
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCV-----QTKDLILWTSMINANGLHGRGKVAI 548
             +  +A+SL++MY +CG L  A +VF+ +        D+ +W  +I+    +G  +  +
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVD 607
             F +M+     PD  +   +L  C+       G++    I+R  ++ DP+ E    L+ 
Sbjct: 533 AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLE--TALIG 590

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
           +    +   EA+     ++       W  ++G
Sbjct: 591 MYSSCSRPMEAWSLFGKLENRSNIVAWNVMIG 622


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/741 (34%), Positives = 409/741 (55%), Gaps = 39/741 (5%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N +++ YA   +  +AR+LF+    K  +  W+S++S Y  +G  +E L  F +M   G 
Sbjct: 72  NIMISAYANLGNLVEARKLFNETPIKNSIT-WSSLVSGYCKNGCEVEGLRQFSQMWSDGQ 130

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YT  + L+AC   S    G  IH   +K      ++VA  L+ MY++C  + EA  
Sbjct: 131 KPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEY 190

Query: 217 VLYQL-ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
           + + L + K+ V W +MLTG+ QN    KA+Q F+E++  G + +     + ++A   + 
Sbjct: 191 LFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSIS 250

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
               G+++H   I  GF  ++ + + L+DMYAKC  +     +   M   D + W ++I 
Sbjct: 251 AYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIV 310

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           G   +    +AL LF  +    +  D     SVL + +  K +   + +H   I+ G   
Sbjct: 311 GCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDA 370

Query: 396 L-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
              + NA+VD+Y K GN+  + +VF  I  KDV+SWTS+++ YVHNG   +AL+LF  M 
Sbjct: 371 CKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMR 430

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
            A V+ D   +    SA + L++++ G++++   I+       S  +SL+ MYA+CG L+
Sbjct: 431 TARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLE 490

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A +VF+ ++T+++I WT                                   A++   +
Sbjct: 491 DAIRVFDSMETRNVISWT-----------------------------------AIIVGYA 515

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
            +GL+  G+ + E M   Y + P  +HYAC++DLLGRA  + EA   +  M +EP A +W
Sbjct: 516 QNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIW 575

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            +LL ACRVH N ELGE   K L++L+P N   YVL+SN+F+ + +W+D   +R  M+  
Sbjct: 576 KSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTM 635

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           G+ K PG SWIE+ +++H+FI+ D+SH  + EIY K+ E+   L +E G+V    F L +
Sbjct: 636 GINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMM-ILIKEAGHVPDMNFALRD 694

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           ++EE K + L  HSE+LA+A+G+L   +G+ IRI KNLRVC DCHS  K +S +F R ++
Sbjct: 695 MDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHII 754

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RD N FHHF  G CSCGD+W
Sbjct: 755 LRDLNCFHHFIEGKCSCGDFW 775



 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 158/565 (27%), Positives = 284/565 (50%), Gaps = 39/565 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G++++A +LF++   +   TW++++  Y  NG  +  L  +S+M   G     +T 
Sbjct: 78  YANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTL 137

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V++AC+ L  L  G  IH   +K   ++  F+   LV MY+KC    +A  LF  + +
Sbjct: 138 GSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPD 197

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           +++ V W ++++ Y+ +G+ L+A+  F+EM+  G+ +N +TF + L AC   S    G +
Sbjct: 198 RKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQ 257

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   + SG    VYV +AL+ MYA+CG +  A  +L  +E  D V WNSM+ G V +  
Sbjct: 258 VHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGY 317

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F ++     + D     + + +     NL  G+ +H+  IK GF +   + N 
Sbjct: 318 MEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNA 377

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAK   ++    VF ++  +D ISWT+++ GY  N  H KAL+LF  ++   +D D
Sbjct: 378 LVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLD 437

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFE 420
             ++  V  AC+ L  +   +++H   I+     L+   N+++ +Y KCG ++ +  VF+
Sbjct: 438 QFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFD 497

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
           S+E+++V+SWT++I  Y  NGL       F          +S+  V  +  AS       
Sbjct: 498 SMETRNVISWTAIIVGYAQNGLVETGQSYF----------ESMEKVYGIKPASDH----- 542

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANG 539
                               + ++D+  R G ++ A  + N +  + D  +W S+++A  
Sbjct: 543 -------------------YACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACR 583

Query: 540 LHGR---GKVAIDLFYKMEAESFAP 561
           +HG    G+ A     K+E  +  P
Sbjct: 584 VHGNLELGERAGKNLIKLEPSNSLP 608



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 221/394 (56%), Gaps = 8/394 (2%)

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           Y  N +I+ YA  G + EA  +  +   K+S++W+S+++G+ +N    + ++ F ++   
Sbjct: 69  YTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSD 128

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           GQKP Q    + + A   L  L  GK +H YAIK    +++ +   L+DMY+KC C+   
Sbjct: 129 GQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEA 188

Query: 316 GRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             +F+ +   ++++ WT ++ GYAQN   LKA++ F+ ++ +G++++     S+L AC+ 
Sbjct: 189 EYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTS 248

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +   +  +++HG II  G   ++ + +A+VD+Y KCG++  +R + +++E  DVV W SM
Sbjct: 249 ISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSM 308

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I   V +G   EAL LF+ M+  ++  D  T  S L + +S   LK G+ ++   I+ GF
Sbjct: 309 IVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGF 368

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---NGLHGRGKVAIDL 550
           +   +V+++LVDMYA+ G L  A  VFN +  KD+I WTS++     NG H +   A+ L
Sbjct: 369 DACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEK---ALQL 425

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           F  M       D      +  AC+   +I  G++
Sbjct: 426 FCDMRTARVDLDQFVVACVFSACAELTVIEFGRQ 459



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 190/341 (55%), Gaps = 2/341 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFT-WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KC  +L+AE LF  +  R  +  W AML  Y  NGE L+ ++ +  MR  G+  + F
Sbjct: 178 MYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHF 237

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP ++ AC  +     G ++HG ++  G+    ++ ++LV MYAKC D   AR + D M
Sbjct: 238 TFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTM 297

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E +DVV WNS+I      G   EAL LF +M    +  + +T+ + L++        +G
Sbjct: 298 -EIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIG 356

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H+ T+K+G +    V+NAL+ MYA+ G ++ A  V  ++ +KD +SW S++TG+V N
Sbjct: 357 ESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHN 416

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             + KA+Q F +++ A    DQ       SA   L  +  G+++HA  IK    S L   
Sbjct: 417 GFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAE 476

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           N+L+ MYAKC C+    RVF  M  ++ ISWT II GYAQN
Sbjct: 477 NSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQN 517



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 150/286 (52%), Gaps = 8/286 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A  + D +    V  WN+M+   V++G     L  + +M    I +D FT
Sbjct: 280 MYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFT 339

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P V+K+ A  K+L  G  +H L +K G+D+   + N+LV MYAK  +   A  +F+++ 
Sbjct: 340 YPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKIL 399

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K DV+ W S+++ Y  +G   +AL LF +M+   +  + +       AC + +    G 
Sbjct: 400 DK-DVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGR 458

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +KS     +   N+LI MYA+CG + +A  V   +E ++ +SW +++ G+ QN 
Sbjct: 459 QVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNG 518

Query: 241 LYCKAMQFFRELQGA-GQKPDQ---VCTVNAVSASGRLG---NLLN 279
           L      +F  ++   G KP      C ++ +  +G++    +LLN
Sbjct: 519 LVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLN 564



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 38/296 (12%)

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF--------- 450
           N ++    K G +D +R +F+ +  +D  +W  MIS+Y + G   EA +LF         
Sbjct: 41  NQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSI 100

Query: 451 --------YLMNEANVE--------------SDSITLVSALSAASSLSILKKGKELNGFI 488
                   Y  N   VE                  TL S L A S+LS+L  GK ++ + 
Sbjct: 101 TWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYA 160

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKV-FNCVQTKDLILWTSMINANGLHGRGKVA 547
           I+        VA+ LVDMY++C  L  A  + F+    K+ + WT+M+     +G    A
Sbjct: 161 IKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKA 220

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY--ACL 605
           I  F +M  +    +H TF ++L AC+       G+   ++  C       P  Y  + L
Sbjct: 221 IQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGR---QVHGCIIWSGFGPNVYVQSAL 277

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           VD+  +   L  A   + +M+I+     W +++  C  H   E   ++  K+   D
Sbjct: 278 VDMYAKCGDLASARMILDTMEIDDVV-CWNSMIVGCVTHGYMEEALVLFHKMHNRD 332


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/627 (38%), Positives = 389/627 (62%), Gaps = 6/627 (0%)

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V  ++  ++ V+W  M+T F Q      A+  F +++ +G  PD+    + +SA   
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC---VNYMGRVFYQMTAQDFISW 330
           LG L  GK+LH+  I+ G   D+ +G +L+DMYAKC     V+   +VF QM   + +SW
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 331 TTIIAGYAQN-NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           T II  YAQ+  C  +A+ELF  +    +  +     SVL AC  L      ++++ Y +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 390 RKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           + G++ +  + N+++ +Y + G ++ +R  F+ +  K++VS+ +++  Y  N  + EA  
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           LF  + +  +   + T  S LS A+S+  + KG++++G +++ G+     + ++L+ MY+
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           RCG ++ A +VFN ++ +++I WTSMI     HG    A+++F+KM      P+ IT++A
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L ACSH G+I+EG+K    M  ++ + P  EHYAC+VDLLGR+  L EA +F+ SM + 
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 423

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
             A VW  LLGACRVH N ELG   A+ +LE +P +P  Y+L+SN+ A++ +WKDV ++R
Sbjct: 424 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 483

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
             M+   L K  G SWIE+ N++H F   + SH ++ +IY++L ++  K+ +E GY+  T
Sbjct: 484 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKI-KEMGYIPDT 542

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
            FVLH++EEE+K Q L+ HSE++A+A+G++ +++   IRI KNLRVC DCH+  K +S  
Sbjct: 543 DFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMA 602

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
            GRE+VVRD+NRFHH + GVCSC DYW
Sbjct: 603 TGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 249/495 (50%), Gaps = 28/495 (5%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A ++FDK+ +R + TW  M+  +   G     ++ +  M + G   D FT+  V+ AC  
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY---DFRKARQLFDRMGEKEDVVL 127
           L  L  G ++H  V++ G      +  SLV MYAKC        +R++F++M E  +V+ 
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVMS 122

Query: 128 WNSIISAYSASGQC-LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
           W +II+AY+ SG+C  EA+ LF +M    +  N ++F + L+AC + S    G ++++  
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182

Query: 187 VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAM 246
           VK G      V N+LI+MYAR G+M +A      L  K+ VS+N+++ G+ +N    +A 
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
             F E+   G         + +S +  +G +  G+++H   +K G+ S+  I N L+ MY
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
           ++C  +    +VF +M  ++ ISWT++I G+A++    +ALE+F  +   G   + +   
Sbjct: 303 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 362

Query: 367 SVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
           +VL ACS       G K  +   + HG + R     +     +VD+ G+ G +  +    
Sbjct: 363 AVLSACSHVGMISEGQKHFNSMYKEHGIVPR-----MEHYACMVDLLGRSGLLVEAMEFI 417

Query: 420 ESIE-SKDVVSWTSMISS-YVHNG--LANEALELFYLMNEANVESDSITLVSALSAASS- 474
            S+    D + W +++ +  VH    L   A E+  ++ +   +  +  L+S L A++  
Sbjct: 418 NSMPLMADALVWRTLLGACRVHGNTELGRHAAEM--ILEQEPDDPAAYILLSNLHASAGQ 475

Query: 475 ----LSILKKGKELN 485
               + I K  KE N
Sbjct: 476 WKDVVKIRKSMKERN 490



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 183/340 (53%), Gaps = 15/340 (4%)

Query: 1   MYGKC---GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-PLRVLETYSRMRVLGISV 56
           MY KC   GSV D+ ++F+++ +  V +W A++ AY  +GE     +E + +M    I  
Sbjct: 95  MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRP 154

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           + F+F  V+KAC  L D   G +++   +K G  S + + NSL++MYA+      AR+ F
Sbjct: 155 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAF 214

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           D + EK ++V +N+I+  Y+ + +  EA  LF E+   G+  +A+TF + L         
Sbjct: 215 DILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 273

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G +IH   +K G      + NALI+MY+RCG +  A  V  ++E+++ +SW SM+TGF
Sbjct: 274 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 333

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSD 295
            ++    +A++ F ++   G KP+++  V  +SA   +G +  G K  ++   + G V  
Sbjct: 334 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 393

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
                  M+ YA  C V+ +GR    + A +FI+   ++A
Sbjct: 394 -------MEHYA--CMVDLLGRSGLLVEAMEFINSMPLMA 424



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 119/235 (50%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + G + DA + FD + ++ + ++NA++  Y  N +       ++ +   GI + AFT
Sbjct: 200 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 259

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++   A +  +  G +IHG +LK GY S   I N+L++MY++C +   A Q+F+ M 
Sbjct: 260 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM- 318

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  +V+ W S+I+ ++  G    AL +F +M   G   N  T+VA L AC      + G 
Sbjct: 319 EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 378

Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           +   +  K  G   ++     ++ +  R G + EA   +  +    D++ W ++L
Sbjct: 379 KHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 433


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/734 (35%), Positives = 397/734 (54%), Gaps = 76/734 (10%)

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN--KDSVSWNSMLT 234
           TL  ++ AA      +     A +L+A YA  G++  A      +    +D+V  N++++
Sbjct: 70  TLSGDLPAAATLFRADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVIS 129

Query: 235 GFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNL--LNGKELHAYAIKQG 291
            + +      A+  FR L  +G  +PD       +SA+G L N+   +  +L    +K G
Sbjct: 130 AYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSG 189

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMG---RVFYQMTAQDFISWTTI--------------- 333
               L + N L+ +Y KC  +       +V  +M  +D ++WTT+               
Sbjct: 190 AGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARS 249

Query: 334 ----------------IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
                           I+GY  +   ++A ELFR + LE +  D     SVL AC+    
Sbjct: 250 VFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGF 309

Query: 378 MSQTKEIHGYIIRKGL-----SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            +  K +HG I R        + L + NA+V +Y KCGNI  +R +F++++SKDVVSW +
Sbjct: 310 FAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNT 369

Query: 433 -------------------------------MISSYVHNGLANEALELFYLMNEANVESD 461
                                          M+S YVH G + +AL+LF  M   +V+  
Sbjct: 370 ILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPC 429

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
             T   A+SA   L  LK GK+L+G +++ GF    S  ++L+ MYARCGA+  AN +F 
Sbjct: 430 DYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFL 489

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +   D + W +MI+A G HG G+ A++LF +M AE   PD I+FL +L AC+HSGL++E
Sbjct: 490 VMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDE 549

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G ++ E M+ D+ + P  +HY  L+DLLGRA  + EA   +++M  EPT  +W A+L  C
Sbjct: 550 GFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGC 609

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           R   + ELG   A +L ++ P + G Y+L+SN ++A+ +W D  +VR  MR  G+KK PG
Sbjct: 610 RTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPG 669

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            SWIE GNK+H F+  D  H E+ ++YK L  +  ++ R+ GYV  T+ VLH++E  +K 
Sbjct: 670 CSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARM-RKLGYVPDTKVVLHDMEPHQKE 728

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
            +L+ HSERLA+ +G+LK   G+ + + KNLR+C DCH+    +S+  GRE+VVRD  RF
Sbjct: 729 HILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRF 788

Query: 822 HHFEAGVCSCGDYW 835
           HHF+ G CSCG+YW
Sbjct: 789 HHFKDGECSCGNYW 802



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 228/517 (44%), Gaps = 90/517 (17%)

Query: 2   YGKCGSVLDAEQLFDKVSQ--RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDA 58
           Y   G +  A   FD V Q  R     NA++ AY         +  +  +   G +  D 
Sbjct: 98  YAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDD 157

Query: 59  FTFPCVIKACAMLKDLDCG--AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDF---RKAR 113
           ++F  ++ A   L ++     A++   VLK G      + N+LVA+Y KC      R AR
Sbjct: 158 YSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDAR 217

Query: 114 QLFDRMGEKE---------------------------DV---VLWNSIISAYSASGQCLE 143
           ++ D M +K+                           DV   V+WN++IS Y  SG  +E
Sbjct: 218 KVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVE 277

Query: 144 ALGLFREM--QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL----QVYV 197
           A  LFR M  +RV L  + +TF + L AC ++ F   G  +H    +   N      + V
Sbjct: 278 AFELFRRMVLERVPL--DEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPV 335

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
            NAL+ +Y++CG +  A  +   +++KD VSWN++L+G+V++    KA++ F E+    +
Sbjct: 336 NNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNE 395

Query: 258 -------------------------------KPDQVCTVNAVSASGRLGNLLNGKELHAY 286
                                          KP       A+SA G LG+L +GK+LH +
Sbjct: 396 LSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGH 455

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            ++ GF      GN L+ MYA+C  V     +F  M   D +SW  +I+   Q+    +A
Sbjct: 456 LVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREA 515

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVIL 399
           LELF  +  EG+  D +   +VL AC+       G +     K   G I  +        
Sbjct: 516 LELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDH-----Y 570

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMIS 435
             ++D+ G+ G I  +R++ +++  +   S W +++S
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILS 607



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 141/581 (24%), Positives = 260/581 (44%), Gaps = 85/581 (14%)

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE-KEDVVLWNSIISAYSASGQCLEALGLF 148
           D       SLVA YA       A   FD + + + D VL N++ISAY+ +     A+ +F
Sbjct: 85  DPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVF 144

Query: 149 REMQRVG-LVTNAYTFVAALQACEDSSFETLG--MEIHAATVKSGQNLQVYVANALIAMY 205
           R +   G L  + Y+F A L A       ++    ++  + +KSG    + V+NAL+A+Y
Sbjct: 145 RSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALY 204

Query: 206 ARCGKM---TEAAGVLYQLENKDSVS-------------------------------WNS 231
            +C  +    +A  VL ++ +KD+++                               WN+
Sbjct: 205 MKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNA 264

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA--YAIK 289
           M++G+V + +  +A + FR +       D+    + +SA    G   +GK +H     ++
Sbjct: 265 MISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQ 324

Query: 290 QGFVSD--LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
             FV +  L + N L+ +Y+KC  +    R+F  M ++D +SW TI++GY +++C  KA+
Sbjct: 325 PNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAV 384

Query: 348 ELFRTVQLEG-LDADVMIIGSV------------------------------LMACSGLK 376
           E+F  +  +  L   VM+ G V                              + AC  L 
Sbjct: 385 EVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELG 444

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +   K++HG++++ G        NA++ +Y +CG +  +  +F  + + D VSW +MIS
Sbjct: 445 SLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMIS 504

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
           +   +G   EALELF  M    +  D I+ ++ L+A +   ++ +G +    + R    +
Sbjct: 505 ALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGII 564

Query: 496 EGSVA-SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---GKVAIDL 550
            G    + L+D+  R G +  A  +   +  +    +W ++++     G    G  A D 
Sbjct: 565 PGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQ 624

Query: 551 FYKMEAESFAPDHI-TFLALLYACSHSGLINEGKKFLEIMR 590
            +KM      P H  T++ L    S +G   +  +  ++MR
Sbjct: 625 LFKM-----TPQHDGTYILLSNTYSAAGRWVDAARVRKLMR 660



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 122/272 (44%), Gaps = 42/272 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSN------------------------ 36
           +Y KCG++  A ++FD +  + V +WN +L  YV +                        
Sbjct: 342 LYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVM 401

Query: 37  -------GEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                  G     L+ ++RMR   +    +T+   I AC  L  L  G ++HG +++ G+
Sbjct: 402 VSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGF 461

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           + ++   N+L+ MYA+C   ++A  +F  M    D V WN++ISA    G   EAL LF 
Sbjct: 462 EGSNSAGNALITMYARCGAVKEANLMFLVM-PNIDSVSWNAMISALGQHGHGREALELFD 520

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK-----SGQNLQVYVANALIAM 204
            M   G+  +  +F+  L AC  S     G +   +  +      G++        LI +
Sbjct: 521 RMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHY----TRLIDL 576

Query: 205 YARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
             R G++ EA  ++  +  + + S W ++L+G
Sbjct: 577 LGRAGRIGEARDLIKTMPFEPTPSIWEAILSG 608



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 1/140 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG+V +A  +F  +      +WNAM+ A   +G     LE + RM   GI  D  +
Sbjct: 474 MYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRIS 533

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC     +D G +    +    G    +     L+ +  +     +AR L   M
Sbjct: 534 FLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTM 593

Query: 120 GEKEDVVLWNSIISAYSASG 139
             +    +W +I+S    SG
Sbjct: 594 PFEPTPSIWEAILSGCRTSG 613


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 291/865 (33%), Positives = 456/865 (52%), Gaps = 42/865 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC S+ DA   F  +  R + TWN ++ A  S   P  V + Y+RM+   +   A  
Sbjct: 68  MYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSS---PAAVFDLYTRMK---LEERAEN 121

Query: 61  FPCVIKACAMLKDLDCGAK----------------IHGLVLKCGYDSTDFIVNSLVAMYA 104
            P  +   A+L  +  G                  +H  +     +   F+  +L+  Y 
Sbjct: 122 RPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYG 181

Query: 105 KCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE-ALGLFREMQRVGLVTNAYTF 163
           KC     A ++F R+ +  D++ WN+ I A + + +  + AL L R M   GL+ N  +F
Sbjct: 182 KCGCVESALEVFSRI-QVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASF 240

Query: 164 VAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN 223
           VA L +C D S   L   IHA   + G    V VA AL+ MY RCG + E+  V   +  
Sbjct: 241 VAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAV 300

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA--SGRLGNLLNGK 281
           ++ VSWN+M+  F Q      A   +  +Q  G +P+++  V A+ A  S    +L    
Sbjct: 301 RNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESA 360

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
            LH +    G   D+ +G  L+ MY     ++     F  + A++ +SW  ++  Y  N 
Sbjct: 361 ALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNG 420

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVIL 399
              +A+ELF  ++ + L  + +   +VL  C  +   S+ + IH  ++  GL   +  I 
Sbjct: 421 RAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDV---SEARSIHAEVVGNGLFAQESSIA 477

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N +V ++ + G+++ +   F++   KD VSW + +++       + A+  FY M      
Sbjct: 478 NGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFR 537

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV--ASSLVDMYARCGA-LDIA 516
            D  TLVS +   + L  L+ G+ +    +     +E  V  AS++++M A+CG+ +D  
Sbjct: 538 PDKFTLVSVVDVCADLGTLELGRSIQQ-QLSAAIEVERDVVVASAVMNMVAKCGSSVDEC 596

Query: 517 NKVFNCVQT--KDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYAC 573
            ++F  +    KDL+ W +MI A   HG G+ A+ LF  M+  S   PD  TF+++L  C
Sbjct: 597 ERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGC 656

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWP-EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           SH+GL+ +G     + R    ++  P EHYACLVD+LGR  +L EA  F+R M +   + 
Sbjct: 657 SHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSV 716

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           VW +LLGAC  + + E GE  A+  +EL   +   YV++SN++AA+ +W+D  +VR  M 
Sbjct: 717 VWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMA 776

Query: 693 GSGLKK-TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
              +KK  PG S I + N++H F ARD+SH +SD IY +L E  + L RE GYV  T+ V
Sbjct: 777 ERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAEL-ERLKGLIREAGYVPDTRLV 835

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           LH+VEEE+K Q+L+ HSE+LAIA+G++       IR+ KNLRVC DCH+  K ++R+  R
Sbjct: 836 LHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQR 895

Query: 812 ELVVRDANRFHHF-EAGVCSCGDYW 835
           E+ VRD NRFHHF + G CSCGDYW
Sbjct: 896 EIAVRDCNRFHHFGKDGECSCGDYW 920



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 266/545 (48%), Gaps = 27/545 (4%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   +++ C    DL  G ++H  ++K G    D + N LV MY+KC     A   F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             +  +  WN++I+A S+     +     +  +R     N  T +A L A       +  
Sbjct: 86  RSR-GIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSS 144

Query: 180 MEIHAATVKS--------GQNLQ--VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
                +  ++        G +L+  ++VA AL+  Y +CG +  A  V  +++  D + W
Sbjct: 145 SSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICW 204

Query: 230 NSMLTGFVQNDLYC-KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           N+ +     ND    +A+   R +   G  P++   V  +S+ G   +L   + +HA   
Sbjct: 205 NAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVE 264

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           + GF+ D+ +   L+ MY +C  V+    VF  M  ++ +SW  +IA +AQ      A  
Sbjct: 265 ELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFA 324

Query: 349 LFRTVQLEGLDAD-VMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDV 405
           ++  +Q EG   + +  + ++  AC S  + + ++  +HG+I   GL  D+++  A+V +
Sbjct: 325 IYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTM 384

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           YG  G ID +R  F++I +K++VSW +M+++Y  NG A EA+ELF  M   ++  + ++ 
Sbjct: 385 YGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSY 444

Query: 466 VSALSAASSLSILKKGKELNGFIIRKG-FNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
           ++ L     +S   + + ++  ++  G F  E S+A+ +V M+AR G+L+ A   F+   
Sbjct: 445 LAVLGCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATV 501

Query: 525 TKDLILWTSMINA----NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
            KD + W + + A      LHG    AI  FY M+ E F PD  T ++++  C+  G + 
Sbjct: 502 VKDSVSWNTKVAALSAREDLHG----AITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLE 557

Query: 581 EGKKF 585
            G+  
Sbjct: 558 LGRSI 562



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 20/178 (11%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L +G++L+  I+++G      + + LV MY++C +LD AN  F+ ++++ +  W ++I A
Sbjct: 40  LAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAA 99

Query: 538 NGLHGRGKVAIDLFYKMEAESFA---PDHITFLALLYACS----------HSGLINEGKK 584
                      DL+ +M+ E  A   P+ +T +A+L A +           +  I + + 
Sbjct: 100 ---QSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARI 156

Query: 585 FLEIMR-CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
             + +R  D + D +      L+D  G+   +E A +    +Q+ P    W A + AC
Sbjct: 157 VHDDIRGSDLERDLFVA--TALLDAYGKCGCVESALEVFSRIQV-PDLICWNAAIMAC 211


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/742 (33%), Positives = 420/742 (56%), Gaps = 4/742 (0%)

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
           +N +++ + K     KAR+LFD M E+   V W  +I  Y  S Q  EA  L+ +M+R G
Sbjct: 77  LNMMISGHLKFGKLSKARELFDGMVERT-AVSWTILIGGYLQSNQSKEAFRLYADMRRGG 135

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           +  +  T V  L    +   + + ++IH   +K G    + V N+L+  Y +   +  A+
Sbjct: 136 IEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLAS 195

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            +   + NKD+V++NS++TG+    L  +A++ F EL  +G KP        +SA+  L 
Sbjct: 196 QLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLD 255

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +   G+++H + +K  FV ++ +GN L+D Y+K   V+ +G++F +M   D IS+  +I 
Sbjct: 256 DTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVIT 315

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
            YA N    ++ +LFR +Q    D       ++L   +    +   ++IH   I  G + 
Sbjct: 316 SYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANF 375

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           +  + NA+VD+Y KC     ++ +F++I  K  V WT+MIS+YV  G   E + +F  M 
Sbjct: 376 ESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMR 435

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              V +D  T  S L A ++L+ +  G++L+  +IR GF       S+L+D YA+CG + 
Sbjct: 436 RTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMT 495

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A K F  +  ++ + W ++I+A   +G     ++ F +M    + PD ++FL++L ACS
Sbjct: 496 DAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           H G + E       M   Y++ P  EHY  +VD+L R    +EA + +  M  EP+  +W
Sbjct: 556 HCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMW 615

Query: 635 CALLGACRVHSNKELGEIVAKKLLEL-DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
            ++L +CR+H N EL +  A +L  + D  +   Y+ +SN++A + +W +V +V+  MR 
Sbjct: 616 SSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRD 675

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            G++K P  SW+EI ++ H F A DKSH E  +I +K+  +++++E++ GY   T   LH
Sbjct: 676 RGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKK-GYKPDTTCALH 734

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +V+E  K++ L  HSER AIA+ ++ + +GS I + KNLR C DCH+  K++S++  RE+
Sbjct: 735 DVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREI 794

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           +VRD++RFHHF+ GVCSCGDYW
Sbjct: 795 IVRDSSRFHHFKDGVCSCGDYW 816



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 274/558 (49%), Gaps = 7/558 (1%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           K G +  A +LFD + +RT  +W  ++G Y+ + +       Y+ MR  GI  D  T   
Sbjct: 86  KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVT 145

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++     L+  +   +IH  V+K GY+    + NSLV  Y K +    A QLF  M  K 
Sbjct: 146 LLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK- 204

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D V +NS+++ YS  G   EA+ LF E+   G+  + +TF A L A         G ++H
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVH 264

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              +K+     V+V NAL+  Y++  ++ E   +  ++   D +S+N ++T +  N  + 
Sbjct: 265 GFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFK 324

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           ++   FR+LQ       Q      +S +    NL  G+++H  AI  G   + ++ N L+
Sbjct: 325 ESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALV 384

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMYAKC       ++F  +  +  + WT +I+ Y Q   H + + +F  ++  G+ AD  
Sbjct: 385 DMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQA 444

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
              S+L AC+ L  +S  +++H  +IR G +S++   +A++D Y KCG +  +   F  +
Sbjct: 445 TFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEM 504

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             ++ VSW ++IS+Y  NG  +  L  F  M ++  + DS++ +S LSA S    +++  
Sbjct: 505 PERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEAL 564

Query: 483 -ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGL 540
              N          +    +S+VD+  R G  D A K+   +      I+W+S++N+  +
Sbjct: 565 WHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRI 624

Query: 541 HGR---GKVAIDLFYKME 555
           H      K A D  + ME
Sbjct: 625 HKNHELAKKAADRLFNME 642



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 235/522 (45%), Gaps = 41/522 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K   +  A QLF  +  +   T+N+++  Y + G     +E +  +   GI    FTF
Sbjct: 185 YCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTF 244

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ A   L D   G ++HG VLK  +    F+ N+L+  Y+K     +  +LF  M E
Sbjct: 245 AALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPE 304

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D + +N +I++Y+ +GQ  E+  LFR++Q        + F   L     S    +G +
Sbjct: 305 L-DGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQ 363

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   +  G N +  V NAL+ MYA+C    EA  +   +  K +V W +M++ +VQ   
Sbjct: 364 IHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGK 423

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           + + +  F +++  G   DQ    + + A   L ++  G++LH+  I+ GF+S++  G+ 
Sbjct: 424 HEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSA 483

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+D YAKC C+    + F +M  ++ +SW  +I+ YAQN      L  F+ +   G   D
Sbjct: 484 LLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPD 543

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES 421
            +   SVL ACS           H   + + L     +  I +V  K  +          
Sbjct: 544 SVSFLSVLSACS-----------HCGFVEEALWHFNSMTQIYEVTPKREH---------- 582

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
                   +TSM+     NG  +EA +   LM E   E   I   S L++      + K 
Sbjct: 583 --------YTSMVDVLCRNGRFDEAEK---LMTEMPFEPSEIMWSSVLNSCR----IHKN 627

Query: 482 KELNGFIIRKGFNLE----GSVASSLVDMYARCGALDIANKV 519
            EL      + FN+E     +   ++ ++YA  G  D   KV
Sbjct: 628 HELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKV 669



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 189/397 (47%), Gaps = 37/397 (9%)

Query: 278 LNGKEL-HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI-------- 328
           LN   L  A+ +K GF  +    N  ++ + +   + +  +VF QM A++ I        
Sbjct: 24  LNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISG 83

Query: 329 -----------------------SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
                                  SWT +I GY Q+N   +A  L+  ++  G++ D + +
Sbjct: 84  HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIES 424
            ++L     L+  +   +IH ++I+ G   +L++ N++VD Y K   +  +  +F+ + +
Sbjct: 144 VTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN 203

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           KD V++ S+++ Y + GL  EA+ELF  ++ + ++    T  + LSAA  L   K G+++
Sbjct: 204 KDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQV 263

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +GF+++  F     V ++L+D Y++   +D   K+F  +   D I +  +I +   +G+ 
Sbjct: 264 HGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQF 323

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYA 603
           K + DLF K++   F      F  LL   + S  +  G++   + +      +   E+  
Sbjct: 324 KESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN-- 381

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            LVD+  + N  +EA +   ++  + T   W A++ A
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTVP-WTAMISA 417



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 124/241 (51%), Gaps = 15/241 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC    +A+++FD ++ ++   W AM+ AYV  G+    +  +S MR  G+  D  T
Sbjct: 386 MYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQAT 445

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +++ACA L  +  G ++H L+++ G+ S  +  ++L+  YAKC     A + F  M 
Sbjct: 446 FASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP 505

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+  V  WN++ISAY+ +G     L  F++M + G   ++ +F++ L AC    F    +
Sbjct: 506 ERNSVS-WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEAL 564

Query: 181 -------EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS-VSWNSM 232
                  +I+  T K           +++ +  R G+  EA  ++ ++  + S + W+S+
Sbjct: 565 WHFNSMTQIYEVTPKREH------YTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSV 618

Query: 233 L 233
           L
Sbjct: 619 L 619


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 266/740 (35%), Positives = 421/740 (56%), Gaps = 49/740 (6%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQR----------VGLVTNAYTFVAALQACEDS 173
           D+  WN  IS+Y  +G+C EAL +F+ M R           G + N    +A +   E  
Sbjct: 58  DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMP 117

Query: 174 SFETLGMEIHAATVKSGQNL-------------QVYVANALIAMYARCGKMTEAAGVLYQ 220
             + +   +        +NL              V   N +++ YA+ G + +A  V  +
Sbjct: 118 ERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDR 177

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +  K+ VSWN++L+ +VQN    +A   F      G + +       VS +  LG  +  
Sbjct: 178 MPEKNDVSWNALLSAYVQNSKLEEACVLF------GSRENWAL----VSWNCLLGGFVKK 227

Query: 281 KELHAYAIKQGF----VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           K++     +Q F    V D+   NT++  YA+   ++   ++F +    D  +WT +++G
Sbjct: 228 KKI--VEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSG 285

Query: 337 YAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           Y QN    +A ELF R  +   +  + M+ G V     G + +   KE+   +  + +S 
Sbjct: 286 YIQNRMVEEARELFDRMPERNEVSWNAMLAGYV----QGER-VEMAKELFDVMPCRNVS- 339

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
               N ++  Y +CG I  ++N+F+ +  +D VSW +MI+ Y  +G + EAL LF LM  
Sbjct: 340 --TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMER 397

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
                +  +  SALS  + +  L+ GK+L+G +++ G+     V ++L+ MY +CG+++ 
Sbjct: 398 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 457

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           AN +F  +  KD++ W +MI     HG G+ A+  F  M+ E   PD  T +A+L ACSH
Sbjct: 458 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSH 517

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           +GL+++G+++   M  DY + P  +HYAC+VDLLGRA  LEEA+  +++M  EP A +W 
Sbjct: 518 TGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWG 577

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
            LLGA RVH N EL E  A K+  ++P N G YVL+SN++A+S +W DV ++R+RMR  G
Sbjct: 578 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 637

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           +KK PG SWIEI NK H+F   D+ H E DEI+  L ++  ++ ++ GYV++T  VLH+V
Sbjct: 638 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRM-KKAGYVSKTSVVLHDV 696

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           EEEEK +M+  HSERLA+AYG+++ + G  IR+ KNLRVC DCH+  K ++++ GR +++
Sbjct: 697 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIIL 756

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD NRFHHF+ G CSCGDYW
Sbjct: 757 RDNNRFHHFKDGSCSCGDYW 776



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 283/591 (47%), Gaps = 57/591 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G   +A ++F ++ + +  ++NAM+  Y+ NGE       +  M       D  ++
Sbjct: 69  YMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM----PERDLVSW 124

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLK---CGYDSTDFIVNSLVAMYAK--CYDFRKARQLF 116
             +IK     ++L    ++   + +   C +       N++++ YA+  C D   AR++F
Sbjct: 125 NVMIKGYVRNRNLGKARELFERMPERDVCSW-------NTILSGYAQNGCVD--DARRVF 175

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYT--FVAALQACEDS 173
           DRM EK DV  WN+++SAY  + +  EA  LF   +   LV+ N     FV   +  E  
Sbjct: 176 DRMPEKNDVS-WNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEAR 234

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
            F             S +   V   N +I  YA+ G++ EA  +  +    D  +W +M+
Sbjct: 235 QF-----------FDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMV 283

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF- 292
           +G++QN +  +A + F          D++   N VS +  L   + G+ +     K+ F 
Sbjct: 284 SGYIQNRMVEEARELF----------DRMPERNEVSWNAMLAGYVQGERVE--MAKELFD 331

Query: 293 ---VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
                ++   NT++  YA+C  ++    +F +M  +D +SW  +IAGY+Q+    +AL L
Sbjct: 332 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRL 391

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
           F  ++ EG   +     S L  C+ +  +   K++HG +++ G  +   + NA++ +Y K
Sbjct: 392 FVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 451

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           CG+I+ + ++F+ +  KD+VSW +MI+ Y  +G   EAL  F  M    ++ D  T+V+ 
Sbjct: 452 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAV 511

Query: 469 LSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTK 526
           LSA S   ++ KG++  +      G        + +VD+  R G L+ A+ +  N     
Sbjct: 512 LSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEP 571

Query: 527 DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           D  +W +++ A+ +HG     + A D  + ME E+        L+ LYA S
Sbjct: 572 DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSG--MYVLLSNLYASS 620



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 178/376 (47%), Gaps = 12/376 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G + +A QLFD+     VFTW AM+  Y+ N       E + RM       +  ++
Sbjct: 255 YAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM----PERNEVSW 310

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++      + ++   ++   V+ C   ST    N+++  YA+C    +A+ LFD+M  
Sbjct: 311 NAMLAGYVQGERVEMAKELFD-VMPCRNVST---WNTMITGYAQCGKISEAKNLFDKM-P 365

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D V W ++I+ YS SG   EAL LF  M+R G   N  +F +AL  C D     LG +
Sbjct: 366 KRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQ 425

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   VK G     +V NAL+ MY +CG + EA  +  ++  KD VSWN+M+ G+ ++  
Sbjct: 426 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGF 485

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIGN 300
             +A++FF  ++  G KPD    V  +SA    G +  G++  H      G   + Q   
Sbjct: 486 GEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYA 545

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQLEGL 358
            ++D+  +   +     +   M  + D   W T++ A     N  L      +   +E  
Sbjct: 546 CMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPE 605

Query: 359 DADVMIIGSVLMACSG 374
           ++ + ++ S L A SG
Sbjct: 606 NSGMYVLLSNLYASSG 621



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 23/300 (7%)

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           SD++  N  +  Y +    +   RVF +M     +S+  +I+GY +N     A  LF  +
Sbjct: 57  SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM 116

Query: 354 QLEGLDA-DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
               L + +VMI G V       + + + +E+   +  +   D+   N I+  Y + G +
Sbjct: 117 PERDLVSWNVMIKGYVRN-----RNLGKARELFERMPER---DVCSWNTILSGYAQNGCV 168

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D +R VF+ +  K+ VSW +++S+YV N    EA  LF          ++  LVS     
Sbjct: 169 DDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLF-------GSRENWALVSWNCLL 221

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIANKVFNCVQTKDLILW 531
                 KK  E   F       +   V+ ++++  YA+ G +D A ++F+     D+  W
Sbjct: 222 GGFVKKKKIVEARQFF--DSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTW 279

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
           T+M++    +   + A +LF +M       + +++ A+L        +   K+  ++M C
Sbjct: 280 TAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEMAKELFDVMPC 335



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 1/140 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A  LF +++ + + +WN M+  Y  +G     L  +  M+  G+  D  T
Sbjct: 448 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDAT 507

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    +D G +  H +    G          +V +  +     +A  L   M
Sbjct: 508 MVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNM 567

Query: 120 GEKEDVVLWNSIISAYSASG 139
             + D  +W +++ A    G
Sbjct: 568 PFEPDAAIWGTLLGASRVHG 587



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 16/212 (7%)

Query: 379 SQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
           SQTK +     + G SD+   N  +  Y + G    +  VF+ +     VS+ +MIS Y+
Sbjct: 46  SQTKPLP----KSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYL 101

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NG    A  LF  M E ++ S ++ +   +   +    L K +EL   +  +      +
Sbjct: 102 RNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRN----LGKARELFERMPERDVCSWNT 157

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           + S     YA+ G +D A +VF+ +  K+ + W ++++A   + + + A  LF   E  +
Sbjct: 158 ILSG----YAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWA 213

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
                +++  LL        I E ++F + M+
Sbjct: 214 L----VSWNCLLGGFVKKKKIVEARQFFDSMK 241


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/726 (33%), Positives = 404/726 (55%), Gaps = 72/726 (9%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + HA  +KSG     Y++  LIA Y+      +A  VL  + +    S++S++    +  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L+ +++  F  +   G  PD     N       L     GK++H  +   G   D  +  
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQD---------------------------------- 326
           ++  MY +C  +    +VF +M+ +D                                  
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215

Query: 327 -FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
             +SW  I++G+ ++  H +A+ +F+ +   G   D + + SVL +    + ++  + IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275

Query: 386 GYIIRKGL-SDLVILNAIVDVYGKCGNI-------------------------------D 413
           GY+I++GL  D  +++A++D+YGK G++                               D
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335

Query: 414 YSRNVFESIESK----DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
            +  +FE  + +    +VVSWTS+I+    NG   EALELF  M  A V+ + +T+ S L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
            A  +++ L  G+  +GF +R        V S+L+DMYA+CG ++++  VFN + TK+L+
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            W S++N   +HG+ K  + +F  +      PD I+F +LL AC   GL +EG K+ ++M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
             +Y + P  EHY+C+V+LLGRA  L+EAY  ++ M  EP + VW ALL +CR+ +N +L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
            EI A+KL  L+P NPG YVL+SN++AA   W +V+ +R +M   GLKK PG SWI++ N
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           ++++ +A DKSH + D+I +K+ EI++++ R+ G+     F LH+VEE+E+ QML+GHSE
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEM-RKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           +LA+ +G+L + +G+ +++ KNLR+C DCH+  K +S   GRE+ +RD NRFHHF+ G+C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754

Query: 830 SCGDYW 835
           SCGD+W
Sbjct: 755 SCGDFW 760



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 146/569 (25%), Positives = 265/569 (46%), Gaps = 81/569 (14%)

Query: 81  HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
           H  +LK G  +  +I   L+A Y+    F  A  +   + +   +  ++S+I A + +  
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPT-IYSFSSLIYALTKAKL 96

Query: 141 CLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANA 200
             +++G+F  M   GL+ +++      + C + S   +G +IH  +  SG ++  +V  +
Sbjct: 97  FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDS---------------------------------- 226
           +  MY RCG+M +A  V  ++ +KD                                   
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216

Query: 227 -VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELH 284
            VSWN +L+GF ++  + +A+  F+++   G  PDQV TV++V  S     +LN G+ +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV-TVSSVLPSVGDSEMLNMGRLIH 275

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKC-------------------CCVNY----------- 314
            Y IKQG + D  + + ++DMY K                     C  Y           
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335

Query: 315 ----MGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
               M  +F + T + + +SWT+IIAG AQN   ++ALELFR +Q+ G+  + + I S+L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            AC  +  +   +  HG+ +R  L D V + +A++D+Y KCG I+ S+ VF  + +K++V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGF 487
            W S+++ +  +G A E + +F  +    ++ D I+  S LSA   + +  +G K     
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR--- 543
               G        S +V++  R G L  A  +   +    D  +W +++N+  L      
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYA 572
            ++A +  + +E E+  P     L+ +YA
Sbjct: 576 AEIAAEKLFHLEPEN--PGTYVLLSNIYA 602



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 218/504 (43%), Gaps = 82/504 (16%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           DA+ +   +   T++++++++ A        + +  +SRM   G+  D+   P + K CA
Sbjct: 68  DADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCA 127

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------ 123
            L     G +IH +    G D   F+  S+  MY +C     AR++FDRM +K+      
Sbjct: 128 ELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSA 187

Query: 124 ----------------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
                                       ++V WN I+S ++ SG   EA+ +F+++  +G
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG 247

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
              +  T  + L +  DS    +G  IH   +K G      V +A+I MY + G +    
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII 307

Query: 216 GVLYQLENKDS-----------------------------------VSWNSMLTGFVQND 240
            +  Q E  ++                                   VSW S++ G  QN 
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ FRE+Q AG KP+ V   + + A G +  L +G+  H +A++   + ++ +G+
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGS 427

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  +N    VF  M  ++ + W +++ G++ +    + + +F ++    L  
Sbjct: 428 ALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487

Query: 361 DVMIIGSVLMAC-------SGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           D +   S+L AC        G K      E +G   R     L   + +V++ G+ G + 
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPR-----LEHYSCMVNLLGRAGKLQ 542

Query: 414 YSRNVFESIE-SKDVVSWTSMISS 436
            + ++ + +    D   W ++++S
Sbjct: 543 EAYDLIKEMPFEPDSCVWGALLNS 566



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 188/456 (41%), Gaps = 90/456 (19%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLE------------- 44
           MY +CG + DA ++FD++S + V T +A+L AY   G   E +R+L              
Sbjct: 160 MYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVS 219

Query: 45  -------------------TYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
                               + ++  LG   D  T   V+ +    + L+ G  IHG V+
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279

Query: 86  KCGYDSTDFIVNSLVAMYAK---------------------CYDF----------RKARQ 114
           K G      ++++++ MY K                     C  +           KA +
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339

Query: 115 LFDRMGEKE---DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           +F+   E+    +VV W SII+  + +G+ +EAL LFREMQ  G+  N  T  + L AC 
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACG 399

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           + +    G   H   V+      V+V +ALI MYA+CG++  +  V   +  K+ V WNS
Sbjct: 400 NIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS 459

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQ 290
           ++ GF  +    + M  F  L     KPD +   + +SA G++G    G K     + + 
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 519

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAG-YAQ 339
           G    L+        Y+  C VN +GR      A D I           W  ++     Q
Sbjct: 520 GIKPRLE-------HYS--CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
           NN  L  +   +   LE  +    ++ S + A  G+
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGM 606


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 286/909 (31%), Positives = 469/909 (51%), Gaps = 107/909 (11%)

Query: 3   GKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG--EPLRVLETYSRMRVLGISVDAFT 60
            + G + +A ++FD +  R +  WN+M+ AY ++G  E  R+L             DA +
Sbjct: 44  ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARIL------------FDAIS 91

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKC-----GYDSTDFIV-NSLVAMYAKCYDFRKARQ 114
              V  A  +L     G    G VL       G    + +  N++V+ Y +  D   AR+
Sbjct: 92  GGNVRTATILLS----GYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARR 147

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT---------------- 158
           LFD M  + DV  WNS+++ Y  S Q ++A  LF++M +  LVT                
Sbjct: 148 LFDAMPSR-DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGK 206

Query: 159 ---------------NAYTFVAALQACEDSSFETLGM--EIHAATVKSGQNLQVYVANAL 201
                          +   F + L A   +  + LG+   +    +K+G    V +  ++
Sbjct: 207 GWDIFRMMHHEGASPDQSNFASVLSAV--TGLQDLGVLEVLRPLVLKTGFESDVVIGTSI 264

Query: 202 IAMYARCGKMTEAAGVLYQ-LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           + +Y R     + A   +  +  ++  +W++M+           A+  +      G+ P 
Sbjct: 265 LNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY------GRDPV 318

Query: 261 QVCTVNAVSASG--RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           +         +G  R G +   + L         VS     N ++  Y +   V+    +
Sbjct: 319 KSIPSQTALLTGLARCGRITEARILFEQIPDPIVVS----WNAMITGYMQNGMVDEAKEL 374

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F +M  ++ ISW  +IAGYAQN    +AL+L + +   G+   +  + S  +ACS +  +
Sbjct: 375 FDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGAL 434

Query: 379 SQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY----------------------- 414
              +++H   ++ G   +  + NA++ +YGKC N++Y                       
Sbjct: 435 ETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAAL 494

Query: 415 --------SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
                   +R++F+++ S+DVVSWT++IS+Y      +EA+E F  M   + + +S  L 
Sbjct: 495 VQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILT 554

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
             LS    L   K G++++   I+ G + E  VA++L+ MY +CG  D ++KVF+ ++ +
Sbjct: 555 ILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEER 613

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           D+  W + I     HG G+ AI ++  ME+    P+ +TF+ LL ACSH+GL++EG +F 
Sbjct: 614 DIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFF 673

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
           + M  DY L P  EHYAC+VDLLGR   ++ A +F+  M IEP   +W ALLGAC++H N
Sbjct: 674 KSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKN 733

Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            E+G   A+KL   +P N GNYV++SN++++   W +V ++R  M+  G+ K PG SW++
Sbjct: 734 AEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQ 793

Query: 707 IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
           I NK+HSF+  DK H + +EI   L ++   L R  GYV  T+FVLH+++EE+K   L  
Sbjct: 794 IRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLL-RGTGYVPDTEFVLHDIDEEQKESSLLY 852

Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
           HSE+LA+AYG+L + +G  I+I KNLR+C DCH+F K VS +  R++ +RD NRFHHF  
Sbjct: 853 HSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRN 912

Query: 827 GVCSCGDYW 835
           G CSCGD+W
Sbjct: 913 GSCSCGDFW 921



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 159/644 (24%), Positives = 282/644 (43%), Gaps = 109/644 (16%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE----------------------- 38
           Y + G VLDA ++FD + +R    WNAM+  YV NG+                       
Sbjct: 105 YARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMV 164

Query: 39  -------------------PLRVLETYSRM-----------------RVL---GISVDAF 59
                              P R L T++ M                 R++   G S D  
Sbjct: 165 TGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQS 224

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK-CYDFRKARQLFDR 118
            F  V+ A   L+DL     +  LVLK G++S   I  S++ +Y +       A + FD 
Sbjct: 225 NFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDG 284

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC-EDSSFET 177
           M E+ +   W+++I+A S  G+   A+ ++     V  + +    +  L  C   +    
Sbjct: 285 MVERNEYT-WSTMIAALSHGGRIDAAIAVYGR-DPVKSIPSQTALLTGLARCGRITEARI 342

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           L  +I    V S         NA+I  Y + G + EA  +  ++  ++++SW  M+ G+ 
Sbjct: 343 LFEQIPDPIVVSW--------NAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYA 394

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN    +A+   + L   G  P      ++  A   +G L  G+++H+ A+K G   +  
Sbjct: 395 QNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSY 454

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMT-------------------------------AQD 326
           + N L+ MY KC  + Y+ +VF +M                                ++D
Sbjct: 455 VCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRD 514

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SWTTII+ YAQ     +A+E F+T+  E    +  I+  +L  C GL      ++IH 
Sbjct: 515 VVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHT 574

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
             I+ G+ S+L++ NA++ +Y KCG  D S  VF+S+E +D+ +W + I+    +GL  E
Sbjct: 575 VAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQHGLGRE 633

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLV 504
           A++++  M    V  + +T V  L+A S   ++ +G +    + R  G        + +V
Sbjct: 634 AIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMV 693

Query: 505 DMYARCGALDIANK-VFNCVQTKDLILWTSMINANGLHGRGKVA 547
           D+  R G +  A K +++     D ++W++++ A  +H   ++ 
Sbjct: 694 DLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIG 737



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/491 (21%), Positives = 217/491 (44%), Gaps = 56/491 (11%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H A  KS  +       A I   AR G++ EA  V   + ++D ++WNSM++ +  + +
Sbjct: 27  VHRALDKSAHS-------ARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGM 79

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS------- 294
              A   F  + G   +   +     +S   RLG +L+ + +     ++  V+       
Sbjct: 80  LEDARILFDAISGGNVRTATIL----LSGYARLGRVLDARRVFDGMPERNTVAWNAMVSC 135

Query: 295 -----DLQIGNTLMD------------MYAKCCCVNYM---GRVFYQMTAQDFISWTTII 334
                D+ +   L D            M    C    M     +F QM  ++ ++WT +I
Sbjct: 136 YVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMI 195

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL- 393
           +GY +   H K  ++FR +  EG   D     SVL A +GL+ +   + +   +++ G  
Sbjct: 196 SGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFE 255

Query: 394 SDLVILNAIVDVYGK-CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
           SD+VI  +I++VY +    +D +   F+ +  ++  +W++MI++  H G  + A+ ++  
Sbjct: 256 SDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR 315

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
               ++ S +  L++ L+    ++  +   E     I   +N       +++  Y + G 
Sbjct: 316 DPVKSIPSQT-ALLTGLARCGRITEARILFEQIPDPIVVSWN-------AMITGYMQNGM 367

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +D A ++F+ +  ++ I W  MI     +GR + A+DL   +      P   +  +   A
Sbjct: 368 VDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLA 427

Query: 573 CSHSGLINEGKKFLEI-MRCDYQLDPWPEHYAC--LVDLLGRANHLEEAYQFVRSMQIEP 629
           CSH G +  G++   + ++   Q +     Y C  L+ + G+  ++E   Q    M+++ 
Sbjct: 428 CSHIGALETGRQVHSLAVKAGCQFNS----YVCNALISMYGKCRNMEYVRQVFNRMRVKD 483

Query: 630 TAEVWCALLGA 640
           T   W + + A
Sbjct: 484 TVS-WNSFIAA 493


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/668 (38%), Positives = 381/668 (57%), Gaps = 32/668 (4%)

Query: 155 GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEA 214
           G   +   F + L++C        G  +H   ++ G    +Y  NAL+ MY++   + E 
Sbjct: 5   GKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEG 64

Query: 215 AGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS--- 271
            GV    ++K       ML G  +           RE+       D  C ++   A    
Sbjct: 65  -GVQRFCDSK-------MLGGIPEP----------REIGKCSNSHDLPCELDERVAGIDQ 106

Query: 272 ----GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
                ++ N+L     +     +G  SD+         Y     +  + +VF  M  +D 
Sbjct: 107 NGDLNQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYY-----LGSLRKVFEMMPKRDI 161

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW T+I+G AQN  H  AL + R +    L  D   + SVL   +    + + KEIHGY
Sbjct: 162 VSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGY 221

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            IR G  +D+ I ++++D+Y KC  +D S  VF  +   D +SW S+I+  V NG+ +E 
Sbjct: 222 AIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 281

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L+ F  M  A ++ + ++  S + A + L+ L  GK+L+G+IIR  F+    +AS+LVDM
Sbjct: 282 LKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDM 341

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           YA+CG +  A  +F+ ++  D++ WT+MI    LHG    AI LF +ME E   P+++ F
Sbjct: 342 YAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAF 401

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           +A+L ACSH+GL++E  K+   M  DY++ P  EHYA + DLLGR   LEEAY+F+  M 
Sbjct: 402 MAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH 461

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           IEPT  VW  LL ACRVH N EL E V+KKL  +DP N G YVL+SN+++A+ +WKD  +
Sbjct: 462 IEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARK 521

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           +R+ MR  G+KK P  SWIEI NK+H+F+A DKSH   D I + L  + E++ERE GYV 
Sbjct: 522 LRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMERE-GYVL 580

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
            T  VLH+VEEE+K  +L  HSERLAI +G++ +  G+ IR+TKNLRVCVDCH+  K +S
Sbjct: 581 DTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFIS 640

Query: 807 RLFGRELV 814
           ++ GRE+V
Sbjct: 641 KIVGREIV 648



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 157/559 (28%), Positives = 272/559 (48%), Gaps = 49/559 (8%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M   G   D   FP V+K+C ++KDL  G  +HG +++ G     +  N+L+ MY+K + 
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
             +                    +  +  S    + LG   E + +G  +N++     L 
Sbjct: 61  LEEGG------------------VQRFCDS----KMLGGIPEPREIGKCSNSHDLPCELD 98

Query: 169 ---ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ----L 221
              A  D + +   M      V + +  +V+       +Y++  K +   G L +    +
Sbjct: 99  ERVAGIDQNGDLNQMSNILYQVNTYK--KVFDEGKTSDVYSKKEKESYYLGSLRKVFEMM 156

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             +D VSWN++++G  QN ++  A+   RE+  A  +PD     + +       NLL GK
Sbjct: 157 PKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGK 216

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           E+H YAI+ G+ +D+ IG++L+DMYAKC  V+   RVFY +   D ISW +IIAG  QN 
Sbjct: 217 EIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNG 276

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILN 400
              + L+ F+ + +  +  + +   S++ AC+ L  +   K++HGYIIR     ++ I +
Sbjct: 277 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 336

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A+VD+Y KCGNI  +R +F+ +E  D+VSWT+MI  Y  +G A +A+ LF  M    V+ 
Sbjct: 337 ALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKP 396

Query: 461 DSITLVSALSAASSLSILKKG-KELNG----FIIRKGFNLEGSVASSLVDMYARCGALDI 515
           + +  ++ L+A S   ++ +  K  N     + I  G     +VA    D+  R G L+ 
Sbjct: 397 NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA----DLLGRVGRLEE 452

Query: 516 ANKVFNCVQTKDL-ILWTSMINANGLHGRGKVAIDLFYKMEAESFA--PDHITFLALLYA 572
           A +  + +  +    +W++++ A  +H      I+L  K+  + F   P +I    LL  
Sbjct: 453 AYEFISDMHIEPTGSVWSTLLAACRVHKN----IELAEKVSKKLFTVDPQNIGAYVLLSN 508

Query: 573 C-SHSGLINEGKKFLEIMR 590
             S +G   + +K    MR
Sbjct: 509 IYSAAGRWKDARKLRIAMR 527



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 177/369 (47%), Gaps = 25/369 (6%)

Query: 13  QLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           ++F+ + +R + +WN ++     NG     L     M    +  D+FT   V+   A   
Sbjct: 151 KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYV 210

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           +L  G +IHG  ++ GYD+  FI +SL+ MYAKC     + ++F  M  + D + WNSII
Sbjct: 211 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVF-YMLPQHDGISWNSII 269

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           +    +G   E L  F++M    +  N  +F + + AC   +   LG ++H   ++S  +
Sbjct: 270 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 329

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
             V++A+AL+ MYA+CG +  A  +  ++E  D VSW +M+ G+  +     A+  F+ +
Sbjct: 330 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 389

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           +  G KP+ V  +  ++A    G L++     A+        D +I   L + YA     
Sbjct: 390 EVEGVKPNYVAFMAVLTACSHAG-LVD----EAWKYFNSMTQDYRIIPGL-EHYA--AVA 441

Query: 313 NYMGRVFYQMTAQDFIS----------WTTIIAGYAQNNCHL-KALELFRTVQLEGLDAD 361
           + +GRV     A +FIS          W+T++A      C + K +EL   V  +    D
Sbjct: 442 DLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA-----CRVHKNIELAEKVSKKLFTVD 496

Query: 362 VMIIGSVLM 370
              IG+ ++
Sbjct: 497 PQNIGAYVL 505



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 122/241 (50%), Gaps = 11/241 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  V D+ ++F  + Q    +WN+++   V NG     L+ + +M +  I  +  +
Sbjct: 240 MYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVS 299

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ ACA L  L  G ++HG +++  +D   FI ++LV MYAKC + R AR +FD+M 
Sbjct: 300 FSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKM- 358

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE-----DSSF 175
           E  D+V W ++I  Y+  G   +A+ LF+ M+  G+  N   F+A L AC      D ++
Sbjct: 359 ELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAW 418

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLT 234
           +          +  G      VA+ L     R G++ EA   +  +  + + S W+++L 
Sbjct: 419 KYFNSMTQDYRIIPGLEHYAAVADLL----GRVGRLEEAYEFISDMHIEPTGSVWSTLLA 474

Query: 235 G 235
            
Sbjct: 475 A 475


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/561 (41%), Positives = 350/561 (62%), Gaps = 2/561 (0%)

Query: 276  NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            NL   +++H  A   G + +L + N L+  Y+    ++    +F  M  +D +SW+ ++ 
Sbjct: 750  NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809

Query: 336  GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
            G+A+   ++     FR +   G   D   +  V+ AC  LK +   + IH  + + GL  
Sbjct: 810  GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL 869

Query: 395  DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
            D  +  A+VD+YGKC  I+ +R +F+ +  +D+V+WT MI  Y   G ANE+L LF  M 
Sbjct: 870  DHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMR 929

Query: 455  EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
            E  V  D + +V+ + A + L  + K + ++ +I RK F L+  + ++++DM+A+CG ++
Sbjct: 930  EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 989

Query: 515  IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
             A ++F+ ++ K++I W++MI A G HG+G+ A+DLF  M      P+ IT ++LLYACS
Sbjct: 990  SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS 1049

Query: 575  HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
            H+GL+ EG +F   M  DY +    +HY C+VDLLGRA  L+EA + + SM  E    +W
Sbjct: 1050 HAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLW 1109

Query: 635  CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
             A LGACR H +  L E  A  LLEL P NPG+Y+L+SN++A + +W+DV ++R  M   
Sbjct: 1110 GAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQR 1169

Query: 695  GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
             LKK PG +WIE+ NK H F   D +H  S EIY+ L  +  KLE   GYV  T FVLH+
Sbjct: 1170 RLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELV-GYVPDTNFVLHD 1228

Query: 755  VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
            V+EE K+ +LY HSE+LAIA+G++ + E + IRI KNLRVC DCH+FCKLVS + GR ++
Sbjct: 1229 VDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVII 1288

Query: 815  VRDANRFHHFEAGVCSCGDYW 835
            VRDANRFHHF+ G CSCGDYW
Sbjct: 1289 VRDANRFHHFKEGACSCGDYW 1309



 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/527 (39%), Positives = 321/527 (60%), Gaps = 2/527 (0%)

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           +SA     NL   +++HA A   G + ++ + N L+  Y+    ++    +F  M  +D 
Sbjct: 66  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW+ ++ G+A+   ++     FR +   G   D   +  V+ AC  LK +   + IH  
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185

Query: 388 IIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           + + GL  D  +  A+VD+Y KC  I+ +R +F+ ++ +D+V+WT MI  Y   G ANE+
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 245

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L LF  M E  V  D + +V+ + A + L  + K + ++ +I RK F L+  + ++++DM
Sbjct: 246 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDM 305

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           YA+CG ++ A ++F+ ++ K++I W++MI A G HG+G+ A+DLF  M +    PD IT 
Sbjct: 306 YAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITL 365

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
            +LLYACSH+GL+ EG +F   M  DY +    +HY C+VDLLGRA  L+EA + ++SM 
Sbjct: 366 ASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMT 425

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           IE    +W A LGACR H +  L E  A  LLEL   NPG+YVL+SN++A + +W+DV +
Sbjct: 426 IEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAK 485

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           +R  M    LKKTPG +WIE+ NK H F   D +H  S EIY+ L  ++ KLE   GYV 
Sbjct: 486 IRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELV-GYVP 544

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLR 793
            T FVLH+V+EE K+ +LY HSE+LAIA+G++ + E + IRI KNLR
Sbjct: 545 DTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 206/400 (51%), Gaps = 12/400 (3%)

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            ++H      G    + VAN L+  Y+    + +A G+   +  +DSVSW+ M+ GF +  
Sbjct: 756  QVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 815

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             Y      FREL   G +PD       + A   L NL  G+ +H    K G   D  +  
Sbjct: 816  DYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA 875

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+DMY KC  +     +F +M  +D ++WT +I GYA+     ++L LF  ++ EG+  
Sbjct: 876  ALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVP 935

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
            D + + +V+ AC+ L  M + + I  YI RK    D+++  A++D++ KCG ++ +R +F
Sbjct: 936  DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIF 995

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            + +E K+V+SW++MI++Y ++G   +AL+LF +M  + +  + ITLVS L A S   +++
Sbjct: 996  DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 1055

Query: 480  KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANK-VFNCVQTKDLILWTSMIN 536
            +G       + + +++   V   + +VD+  R G LD A K + +    KD  LW + + 
Sbjct: 1056 EGLRFFS-XMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLG 1114

Query: 537  ANGLHGR----GKVAIDLFYKMEAESFAPDHITFLALLYA 572
            A   H       K A  L   +E +   P H   L+ +YA
Sbjct: 1115 ACRTHKDVXLAEKAATSL---LELQPQNPGHYILLSNIYA 1151



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 184/374 (49%), Gaps = 20/374 (5%)

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           ++ +   A +HG++          + N L+  Y+       A  LFD M  + D V W+ 
Sbjct: 78  VRQVHAQASVHGML------ENIVVANKLIYFYSYYRALDDAYGLFDGMCVR-DSVSWSV 130

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           ++  ++  G  +   G FRE+ R G   + YT    ++AC D     +G  IH    K G
Sbjct: 131 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 190

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +L  +V  AL+ MY +C ++ +A  +  +++ +D V+W  M+ G+ +     +++  F 
Sbjct: 191 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 250

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           +++  G  PD+V  V  V A  +LG +   + +  Y  ++ F  D+ +G  ++DMYAKC 
Sbjct: 251 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 310

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
           CV     +F +M  ++ ISW+ +IA Y  +    KAL+LF  +   G+  D + + S+L 
Sbjct: 311 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLY 370

Query: 371 ACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           ACS       GL+  S   E   Y +R   +D+     +VD+ G+ G +D +  + +S+ 
Sbjct: 371 ACSHAGLVEEGLRFFSSMWE--DYSVR---TDVKHYTCVVDLLGRAGRLDEALKLIKSMT 425

Query: 424 -SKDVVSWTSMISS 436
             KD   W + + +
Sbjct: 426 IEKDEGLWGAFLGA 439



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 178/367 (48%), Gaps = 20/367 (5%)

Query: 78   AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
            A +HG++          + N LV  Y+       A  LFD M  + D V W+ ++  ++ 
Sbjct: 761  ASVHGML------QNLIVANKLVXFYSYYRALDDAYGLFDGMCVR-DSVSWSVMVGGFAK 813

Query: 138  SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
             G  +   G FRE+ R G   + YT    ++AC D     +G  IH    K G +L  +V
Sbjct: 814  VGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFV 873

Query: 198  ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
              AL+ MY +C ++ +A  +  ++  +D V+W  M+ G+ +     +++  F +++  G 
Sbjct: 874  CAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGV 933

Query: 258  KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
             PD+V  V  V A  +LG +   + +  Y  ++ F  D+ +G  ++DM+AKC CV     
Sbjct: 934  VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESARE 993

Query: 318  VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS---- 373
            +F +M  ++ ISW+ +IA Y  +    KAL+LF  +   G+  + + + S+L ACS    
Sbjct: 994  IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGL 1053

Query: 374  ---GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVS 429
               GL+  S   E   Y +R    D+     +VD+ G+ G +D +  +  S+   KD   
Sbjct: 1054 VEEGLRFFSXMWE--DYSVR---XDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGL 1108

Query: 430  WTSMISS 436
            W + + +
Sbjct: 1109 WGAFLGA 1115



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 147/308 (47%), Gaps = 9/308 (2%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           DA  LFD +  R   +W+ M+G +   G+ +    T+  +   G   D +T P VI+AC 
Sbjct: 112 DAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACR 171

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
            LK+L  G  IH +V K G D   F+  +LV MY KC +   AR LFD+M E+ D+V W 
Sbjct: 172 DLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQER-DLVTWT 230

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
            +I  Y+  G+  E+L LF +M+  G+V +    V  + AC           I     + 
Sbjct: 231 VMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRK 290

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
              L V +  A+I MYA+CG +  A  +  ++E K+ +SW++M+  +  +    KA+  F
Sbjct: 291 KFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 350

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
             +  +G  PD++   + + A    G +  G           F S  +  +   D+    
Sbjct: 351 PMMLSSGMLPDKITLASLLYACSHAGLVEEGLRF--------FSSMWEDYSVRTDVKHYT 402

Query: 310 CCVNYMGR 317
           C V+ +GR
Sbjct: 403 CVVDLLGR 410



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 1/271 (0%)

Query: 10   DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
            DA  LFD +  R   +W+ M+G +   G+ +    T+  +   G   D +T P VI+AC 
Sbjct: 788  DAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACR 847

Query: 70   MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
             LK+L  G  IH +V K G D   F+  +LV MY KC +   AR LFD+M E+ D+V W 
Sbjct: 848  DLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXER-DLVTWT 906

Query: 130  SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
             +I  Y+  G   E+L LF +M+  G+V +    V  + AC           I     + 
Sbjct: 907  VMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRK 966

Query: 190  GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
               L V +  A+I M+A+CG +  A  +  ++E K+ +SW++M+  +  +    KA+  F
Sbjct: 967  KFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 1026

Query: 250  RELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
              +  +G  P+++  V+ + A    G +  G
Sbjct: 1027 PMMLRSGILPNKITLVSLLYACSHAGLVEEG 1057



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 3/235 (1%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MYGKC  + DA  LFDK+ +R + TW  M+G Y   G     L  + +MR  G+  D   
Sbjct: 880  MYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVA 939

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               V+ ACA L  +     I   + +  +     +  +++ M+AKC     AR++FDRM 
Sbjct: 940  MVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME 999

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            EK +V+ W+++I+AY   GQ  +AL LF  M R G++ N  T V+ L AC  +     G+
Sbjct: 1000 EK-NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGL 1058

Query: 181  EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
               +   +       V     ++ +  R G++ EA  ++  +   KD   W + L
Sbjct: 1059 RFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFL 1113



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  + DA  LFDK+ +R + TW  M+G Y   G+    L  + +MR  G+  D   
Sbjct: 204 MYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVA 263

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA L  +     I   + +  +     +  +++ MYAKC     AR++FDRM 
Sbjct: 264 MVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME 323

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK +V+ W+++I+AY   GQ  +AL LF  M   G++ +  T  + L AC  +     G+
Sbjct: 324 EK-NVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGL 382

Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
              ++  +       V     ++ +  R G++ EA  ++  +   KD   W + L
Sbjct: 383 RFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFL 437


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/656 (37%), Positives = 388/656 (59%), Gaps = 8/656 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF---IVNSLVAMYAKCYDFRKARQLFD 117
           +  +++ C   K +    +IH   +  G  S+ +   +++SL A YA C     AR+LFD
Sbjct: 21  YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFE 176
            +     +  WN++I  Y+ SG   +ALGLF +M   G    + YT+   ++AC D    
Sbjct: 81  EL-RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLP 139

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            +G  IHA TV SG +   +V N+L+AMY  CG+M  A  V   +  +  VSWN+M+ G+
Sbjct: 140 EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGY 199

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            +N    +A+  F  + G G +PD    V+ +     L  L  G+ +HA    +    D+
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N+L+DMYAKC  ++    +FY+M  +D +SWTT++ GY  N     AL L + +Q E
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
            +  + + + SVL AC+ L  +   + +HG+ IR+ L S++++  A++D+Y KC N++ S
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             VF     +    W ++IS  +HNGL+ +A+ELF  M    V+ +  TL S L A + L
Sbjct: 380 FRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFL 439

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV--QTKDLILWTS 533
           + L++ + ++G++IR GF     VA+ L+D+Y++CG+L+ A+ +FN +  + KD+I W++
Sbjct: 440 TDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSA 499

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           +I   G+HG G+ AI LF +M      P+ ITF ++L+ACSH+GL++EG    + M  D 
Sbjct: 500 IIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDN 559

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
           Q+    +HY C++DLLGRA  LEEAY+ +R+M   P   VW ALLG+C +H N ELGE+ 
Sbjct: 560 QMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVA 619

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
           AK L EL+PGN GNYVL++N+++A  +W+D E VR+ M   GL+KTP  S IE+ N
Sbjct: 620 AKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675



 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 181/570 (31%), Positives = 306/570 (53%), Gaps = 22/570 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS-VDAFT 60
           Y  CG    A +LFD++   ++F+WNAM+  Y ++G     L  + +M   G    D +T
Sbjct: 66  YAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYT 125

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P VIKAC      + GA IH   +  G+DS  F+ NSL+AMY  C +   AR++FD M 
Sbjct: 126 YPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMR 185

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+  +V WN++I+ Y  +G   EAL +F  M   G+  +  T V+ L  C       +G 
Sbjct: 186 ERT-LVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGR 244

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA          + V N+L+ MYA+CG M EA  + Y+++ +D VSW +M+ G++ N 
Sbjct: 245 RVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNG 304

Query: 241 ------LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
                 L C+ MQF         KP+ V   + +SA   L +L +G+ LH +AI+Q   S
Sbjct: 305 DARSALLLCQMMQF------ESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLES 358

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           ++ +   L+DMYAKC  VN   RVF + + Q    W  II+G   N    KA+ELF+ + 
Sbjct: 359 EVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQML 418

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNID 413
           +E +D +   + S+L A + L  + Q + +HGY+IR G LS + +   ++D+Y KCG+++
Sbjct: 419 MEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLE 478

Query: 414 YSRNVFESI--ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
            + N+F  I  + KD+++W+++I+ Y  +G    A+ LF  M ++ V+ + IT  S L A
Sbjct: 479 SAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHA 538

Query: 472 ASSLSILKKGKELNGFIIRKG-FNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLI 529
            S   ++ +G  L  F++     +L     + ++D+  R G L+ A ++   +  + +  
Sbjct: 539 CSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHA 598

Query: 530 LWTSMINANGLHGR---GKVAIDLFYKMEA 556
           +W +++ +  +H     G+VA    +++E 
Sbjct: 599 VWGALLGSCVIHENVELGEVAAKWLFELEP 628



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 216/443 (48%), Gaps = 6/443 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG +  A ++FD + +RT+ +WN M+  Y  NG     L  +  M   GI  D  T
Sbjct: 167 MYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCAT 226

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+  C+ LK+L+ G ++H LV          + NSL+ MYAKC +  +A+ +F  M 
Sbjct: 227 VVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEM- 285

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K DVV W ++++ Y  +G    AL L + MQ   +  N  T  + L AC        G 
Sbjct: 286 DKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGR 345

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   ++     +V V  ALI MYA+C  +  +  V  +   + +  WN++++G + N 
Sbjct: 346 CLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNG 405

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  KA++ F+++      P+     + + A   L +L   + +H Y I+ GF+S +++  
Sbjct: 406 LSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVAT 465

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTA--QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            L+D+Y+KC  +     +F  +    +D I+W+ IIAGY  +     A+ LF  +   G+
Sbjct: 466 ILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGV 525

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYSR 416
             + +   S+L ACS    + +   +  +++      L       ++D+ G+ G ++ + 
Sbjct: 526 KPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAY 585

Query: 417 NVFESIESK-DVVSWTSMISSYV 438
            +  ++  + +   W +++ S V
Sbjct: 586 ELIRTMAFRPNHAVWGALLGSCV 608


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/837 (31%), Positives = 459/837 (54%), Gaps = 10/837 (1%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MY KCGS+  A ++F+++ +R V +W AM+  YV +G+    L  + ++   GI  +  +
Sbjct: 245  MYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVS 304

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            F  ++ AC    DL  G K+H  + + G +    + N+L++MY++C     ARQ+FD + 
Sbjct: 305  FASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNL- 363

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
               +   WN++I+ Y   G   EA  LFR M++ G   + +T+ + L  C D +    G 
Sbjct: 364  RSLNRTTWNAMIAGY-GEGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGK 422

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            E+H+    +G    + VA ALI+MYA+CG   EA  V  Q+  ++ +SWN+ ++   ++D
Sbjct: 423  ELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHD 482

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            L  +A Q F++++     PD +  +  +++     +L  G+ +H    + G +S+  + N
Sbjct: 483  LGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVAN 542

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+ MY +C  +     VFY++  +D  SW  +IA   Q+  +  A +LFR  + EG   
Sbjct: 543  ALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKG 602

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
            D     +VL A + L+ +   + IHG + + G   D+ +L  ++ +Y KCG++  + NVF
Sbjct: 603  DKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVF 662

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +++ KDVV W +M+++Y H+    +AL+LF  M    V  DS T  +AL+A + L+ ++
Sbjct: 663  STVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVE 722

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
             GK+++  +   G   +  V++SL++MY+RCG L  A +VF  + ++D+  W ++I    
Sbjct: 723  HGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYC 782

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             +G+G +A++ +  M   S  P+  TF ++L + +  G   +   FLE ++ ++ ++P  
Sbjct: 783  QNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSE 842

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            +HYA +V  LGRA  L+EA +F+  +  E  A +W +LL ACR+H N EL E   + LL+
Sbjct: 843  QHYAYMVAALGRAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLD 902

Query: 660  LDP-GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
                 +P     + +++AA+ +W+DV  ++  M+ +GL     S  IE+ ++ H+FIA  
Sbjct: 903  AKAQASPAVCEQLMSIYAAAGRWEDVSVLKTTMQEAGLVALK-SCTIEVNSEFHNFIANH 961

Query: 719  KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
             S      +  K+ E+  K+  + G+    Q+  ++  E+E   + +   E LA+AYG+ 
Sbjct: 962  LSPQIG--VQCKIEELVRKMT-DRGFSLDPQYASNDSREKEC--LFFQCPELLAVAYGLE 1016

Query: 779  KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             +  G  IR   + RV    H   K +SR + R ++VRD N FH FE G+CSCGDYW
Sbjct: 1017 HTASGVSIRCVTDSRVTDPSHEMLKFISRAYDRGILVRDPNCFHIFEDGICSCGDYW 1073



 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 188/586 (32%), Positives = 324/586 (55%), Gaps = 3/586 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA  +F  +  + V +WNAM+  Y  +G      + + +M+  G+  +  T
Sbjct: 144 MYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNT 203

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ AC     L+ G +IH  + K GY+S   +  +L+ MY KC     AR++F+ M 
Sbjct: 204 FISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMR 263

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +VV W ++IS Y   G   EAL LFR++ R G+  N  +F + L AC + +    G+
Sbjct: 264 ER-NVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGL 322

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA   ++G   +V V NALI+MY+RCG +  A  V   L + +  +WN+M+ G+ +  
Sbjct: 323 KLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEG- 381

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A + FR ++  G +PD+    + ++      +L  GKELH+     G+ +DL +  
Sbjct: 382 LMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVAT 441

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYAKC       +VF QM  ++ ISW   I+   +++   +A + F+ ++ + ++ 
Sbjct: 442 ALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNP 501

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D +   ++L +C+  + + + + IHG I + G LS+  + NA++ +YG+CGN+  +R VF
Sbjct: 502 DHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVF 561

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I  +D+ SW +MI++ V +G    A +LF        + D  T ++ L A ++L  L 
Sbjct: 562 YRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLD 621

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G+ ++G + + GF  +  V ++L+ MY++CG+L  A  VF+ VQ KD++ W +M+ A  
Sbjct: 622 AGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYA 681

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
              RG+ A+ LF +M+ E   PD  T+   L AC+    +  GKK 
Sbjct: 682 HSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKI 727



 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 190/638 (29%), Positives = 326/638 (51%), Gaps = 26/638 (4%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G+  +   +   ++ C + K L  G K+H  +    +    ++ N L++MY+KC     A
Sbjct: 95  GVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDA 154

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
             +F  M E +DVV WN++IS Y+  G+  EA  LF +MQR GL  N  TF++ L AC+ 
Sbjct: 155 NNVFQAM-EDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQS 213

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
                 G +IH+   K+G    V V+ ALI MY +CG +  A  V  ++  ++ VSW +M
Sbjct: 214 PIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAM 273

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           ++G+VQ+    +A+  FR+L  +G +P++V   + + A     +L  G +LHAY  + G 
Sbjct: 274 ISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGL 333

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
             ++ +GN L+ MY++C  +    +VF  + + +  +W  +IAGY +     +A  LFR 
Sbjct: 334 EQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEGLME-EAFRLFRA 392

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGN 411
           ++ +G   D     S+L  C+    + + KE+H  I   G  +DL +  A++ +Y KCG+
Sbjct: 393 MEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGS 452

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
            + +R VF  +  ++V+SW + IS    + L  EA + F  M   +V  D IT ++ L++
Sbjct: 453 PEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNS 512

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            +S   L++G+ ++G I + G      VA++L+ MY RCG L  A +VF  ++ +DL  W
Sbjct: 513 CTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSW 572

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH----------SGLINE 581
            +MI AN  HG    A DLF K  +E    D  TF+ +L A ++           GL+ +
Sbjct: 573 NAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEK 632

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G  F + +R              L+ +  +   L +A     ++Q E     W A+L A 
Sbjct: 633 G-GFGKDIRV----------LTTLIKMYSKCGSLRDAENVFSTVQ-EKDVVCWNAMLAA- 679

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASR 679
             HS++    +   + ++L+  NP +    + + A +R
Sbjct: 680 YAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACAR 717



 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 160/551 (29%), Positives = 284/551 (51%), Gaps = 18/551 (3%)

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
           G  + + + G+  N   +   LQ C  +     G ++H     +     +Y+ N LI+MY
Sbjct: 86  GAVQLLGKRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMY 145

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
           ++CG + +A  V   +E+KD VSWN+M++G+  +    +A   F ++Q  G KP+Q   +
Sbjct: 146 SKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFI 205

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           + +SA      L  G+++H+   K G+ SD+ +   L++MY KC  +    +VF +M  +
Sbjct: 206 SILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRER 265

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           + +SWT +I+GY Q+    +AL LFR +   G+  + +   S+L AC+    + +  ++H
Sbjct: 266 NVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLH 325

Query: 386 GYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
            YI + GL   V++ NA++ +Y +CG++  +R VF+++ S +  +W +MI+ Y   GL  
Sbjct: 326 AYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGY-GEGLME 384

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           EA  LF  M +   + D  T  S L+  +  + L +GKEL+  I   G+  + +VA++L+
Sbjct: 385 EAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALI 444

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
            MYA+CG+ + A KVFN +  +++I W + I+    H  GK A   F +M  +   PDHI
Sbjct: 445 SMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHI 504

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW----PEHYA-CLVDLLGRANHLEEAY 619
           TF+ LL +C+    +  G+          +++ W      H A  L+ + GR  +L +A 
Sbjct: 505 TFITLLNSCTSPEDLERGRYI------HGKINQWGMLSNNHVANALISMYGRCGNLADAR 558

Query: 620 QFVRSMQIEPTAEVWCALLGACRVH-SNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
           +    ++       W A++ A   H +N    ++  K   E   G  G+     NV  A 
Sbjct: 559 EVFYRIRRRDLGS-WNAMIAANVQHGANGSAFDLFRKYRSE---GGKGDKYTFINVLRAV 614

Query: 679 RKWKDVEQVRM 689
              +D++  RM
Sbjct: 615 ANLEDLDAGRM 625


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/696 (36%), Positives = 408/696 (58%), Gaps = 6/696 (0%)

Query: 145 LGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL-QVYVANALI 202
           +G FR      L T  +    A LQ+C  +    LG  +HA  V SG      ++AN LI
Sbjct: 1   MGKFRGQHSRSLDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLI 60

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
            MY+ C  +  A  +   +   + VSW ++++G  QN ++  A+  F  +  AG  P Q 
Sbjct: 61  TMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQF 120

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
              +A  A+  L     G +LH   ++ GF ++L + + L DMY+K   +    RVF QM
Sbjct: 121 ALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQM 180

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQT 381
             +D ++WT +I GYA+N     A+  FR ++ EGL  AD  ++ SVL A  GLK     
Sbjct: 181 PQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLA 240

Query: 382 KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVH 439
           + IH  +++ G   ++ + NA+ D+Y K  ++D +  V +  + S +VVS TS+I  Y+ 
Sbjct: 241 RAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIE 300

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
                +AL +F  +    VE +  T  S +   +  ++L++G +L+  +I+     +  V
Sbjct: 301 TDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFV 360

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
           +S+L+DMY +CG + ++ ++F  ++    I W + IN    HG G+ AI  F +M +   
Sbjct: 361 SSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGI 420

Query: 560 APDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAY 619
            P+HITF++LL ACSH+GL++EG K+   M+  + ++P  EHY+C++D+ GRA  L+EA 
Sbjct: 421 RPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAE 480

Query: 620 QFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASR 679
           +F+  M ++P A  WC+LLGACR+  NKELGEI A  +++L+P N G +V +S ++A+  
Sbjct: 481 KFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLG 540

Query: 680 KWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLE 739
           +W+DV+ VR  MR + +KK PG SW++   K H F + D SH + ++IY+KL E+ E+++
Sbjct: 541 QWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIK 600

Query: 740 REGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCH 799
            E GYV  T+F+  N+E+  K ++L  HSER+A+A+ ++       I + KNLR+C DCH
Sbjct: 601 EE-GYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCH 659

Query: 800 SFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S  K +S++  R+++VRD +RFHHF  G CSCGDYW
Sbjct: 660 SALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 268/531 (50%), Gaps = 20/531 (3%)

Query: 37  GEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHG-LVLKCGYDSTDFI 95
           G+  R L+T + +R+             +++C    DL  G  +H  LVL     ++ F+
Sbjct: 6   GQHSRSLDTATSLRL----------AAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFL 55

Query: 96  VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            N L+ MY+ C D   A +LFD M  + ++V W +++S  + +    +AL  F  M R G
Sbjct: 56  ANHLITMYSHCADVPSAVRLFDAM-PRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAG 114

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           LV   +   +A +A    +    G ++H   V+ G + +++VA+ L  MY++ G + EA 
Sbjct: 115 LVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEAC 174

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRL 274
            V  Q+  KD+V+W +M+ G+ +N     A+  FR+++  G    DQ    + +SASG L
Sbjct: 175 RVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGL 234

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF-YQMTAQDFISWTTI 333
            +    + +H+  +K GF  ++ + N L DMYAK   ++   RV      + + +S T++
Sbjct: 235 KDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSL 294

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           I GY + +C  KAL +F  ++ +G++ +     S++  C+    + Q  ++H  +I+  L
Sbjct: 295 IDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSL 354

Query: 394 -SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
            SD  + + ++D+YGKCG I  S  +F+ IE    ++W + I+    +G   EA+  F  
Sbjct: 355 ISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDR 414

Query: 453 MNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           M  + +  + IT VS L+A S   ++ +G K         G   +G   S ++DMY R G
Sbjct: 415 MTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAG 474

Query: 512 ALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAES 558
            LD A K    +  K +   W S++ A  + G    G++A D   K+E ++
Sbjct: 475 RLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDN 525



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 227/480 (47%), Gaps = 18/480 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C  V  A +LFD + +  + +W  ++     N      L  +S M   G+    F 
Sbjct: 62  MYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFA 121

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
                +A A L     GA++H + ++ G+D+  F+ ++L  MY+K     +A ++FD+M 
Sbjct: 122 LSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMP 181

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
           +K D V W ++I  Y+ +G    A+  FR+M+R GLV  + +   + L A        L 
Sbjct: 182 QK-DAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLA 240

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLTGFVQ 238
             IH+  +KSG   +V V NAL  MYA+   M  AA V+   +   + VS  S++ G+++
Sbjct: 241 RAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIE 300

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            D   KA+  F EL+  G +P++    + +        L  G +LHA  IK   +SD  +
Sbjct: 301 TDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFV 360

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            +TL+DMY KC  ++   ++F ++     I+W   I   AQ+    +A+  F  +   G+
Sbjct: 361 SSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGI 420

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             + +   S+L ACS       GLK     K+ HG I  KG       + I+D+YG+ G 
Sbjct: 421 RPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHG-IEPKGEH----YSCIIDMYGRAGR 475

Query: 412 IDYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
           +D +      +  K +   W S++ +    G  N+ L      N   +E D+  +  +LS
Sbjct: 476 LDEAEKFIGEMPVKPNAYGWCSLLGACRMRG--NKELGEIAADNMMKLEPDNTGVHVSLS 533


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/683 (38%), Positives = 398/683 (58%), Gaps = 21/683 (3%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQV-YVANALIAMYARCGKMTEAAGVL------- 218
           LQ C  +S  TL + IH++    G  L   +    LI +Y++ G +  A  +        
Sbjct: 32  LQCC--TSLTTLKL-IHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHH 88

Query: 219 -YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ--GAGQKPDQVCTVNAVSASGRLG 275
               +  +S   N+ML  +       +A+  +  +Q  G G        V  V AS  LG
Sbjct: 89  HGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS-ELG 147

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            +  G+ +H   ++ GF SDL +   L+DMYAKC  +     VF +M  +D + WT +I 
Sbjct: 148 AVF-GEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LS 394
            Y Q    LKAL LFR +Q EG   D +   SV  A   L        +HGY +  G + 
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIG 266

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           D+ + N+IV +Y KCGN++ +R VF+ +E ++ +SW SM+S Y  NG   +AL LF  M 
Sbjct: 267 DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
            +  + + +T +  +SA S L     G++L+ F+I    +++ ++ ++++DMY +CG LD
Sbjct: 327 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLD 386

Query: 515 IANKVFNCVQ--TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
            A ++FN  +   +D+  W  +I+  G+HG GK A++LF +M+ E   P+ ITF ++L A
Sbjct: 387 TAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSA 446

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CSH+GLI+EG+K    M     + P  +HYAC+VD+LGRA  L EA++ ++ +   P+ E
Sbjct: 447 CSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDE 505

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           VW ALL ACR+H N ELGEI A  L +L+P + G YVL+SN++AAS KWK+VE VR  M+
Sbjct: 506 VWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMK 565

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
             GLKK    S IE G ++H F   D+S     E+Y+K+  +  +++   GYV     VL
Sbjct: 566 SRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMV-GYVPDLSCVL 624

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
           H+VE E+K  +L  HSE+LA+A+G++K  +G  I++TKNLRVC DCH   K +S ++GR+
Sbjct: 625 HDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRK 684

Query: 813 LVVRDANRFHHFEAGVCSCGDYW 835
           ++VRD NRFHHF+ G CSCGDYW
Sbjct: 685 IIVRDGNRFHHFQGGRCSCGDYW 707



 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 152/500 (30%), Positives = 264/500 (52%), Gaps = 22/500 (4%)

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRM-------GEKEDVVLWNSIISAYSASGQCLEA 144
           T   +  L+ +Y+K  D   AR LFD          +  +  L N+++ AY+ +G+  EA
Sbjct: 57  TPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEA 116

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
           + L+  MQR+G+  N +T+   L+ C        G  +H   V++G    ++V  AL+ M
Sbjct: 117 IDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDM 176

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           YA+CG++ +A  V  ++  +D V W +M+T + Q +   KA+  FR++Q  G   D++  
Sbjct: 177 YAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITA 236

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           ++  SA G+LG+      +H YA+  GF+ D+ +GN+++ MYAKC  V     VF +M  
Sbjct: 237 ISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEE 296

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           ++ ISW ++++GY QN     AL LF  +Q    D + +    ++ ACS L      +++
Sbjct: 297 RNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKL 356

Query: 385 HGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE--SKDVVSWTSMISSYVHNG 441
           H ++I   +  D  + NAI+D+Y KCG++D +  +F + E   +DV SW  +IS Y  +G
Sbjct: 357 HNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHG 416

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
              EALELF  M    VE + IT  S LSA S   ++ +G++    + +     E    +
Sbjct: 417 HGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYA 476

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---GKVAIDLFYKMEAE 557
            +VDM  R G L+ A ++   + ++    +W +++ A  +HG    G++A +  +++E  
Sbjct: 477 CMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLE-- 534

Query: 558 SFAPDHITFLALL---YACS 574
              P+H  +  L+   YA S
Sbjct: 535 ---PEHTGYYVLMSNIYAAS 551



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 258/528 (48%), Gaps = 48/528 (9%)

Query: 1   MYGKCGSVLDAEQLFDK--------VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL 52
           +Y K G +  A  LFD               F  N ML AY + G     ++ Y  M+ +
Sbjct: 67  LYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRM 126

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G+ V+ FT+P V+K CA       G  +HG V++ G+ S  F+  +LV MYAKC +   A
Sbjct: 127 GVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDA 186

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
            ++FDRM  + DVV W ++I+ Y  + + L+AL LFR+MQ  G + +  T ++   A   
Sbjct: 187 HEVFDRMLIR-DVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQ 245

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
                + + +H   V +G    V V N+++ MYA+CG +  A  V  ++E ++ +SWNSM
Sbjct: 246 LGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSM 305

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           L+G+ QN     A+  F ++Q +   P+ V  +  VSA   LG+   G++LH + I    
Sbjct: 306 LSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKM 365

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFY--QMTAQDFISWTTIIAGYAQNNCHLKALELF 350
             D  + N +MDMY KC  ++    +F   ++  +D  SW  +I+GY  +    +ALELF
Sbjct: 366 DIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELF 425

Query: 351 RTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIV 403
             +Q+EG++ + +   S+L ACS       G KC +   ++    +R  +     +   V
Sbjct: 426 SRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLS---VRPEMKHYACM---V 479

Query: 404 DVYGKCGNIDYSRNVFESIESK--DVVSWTSMISSYVHNGL------ANEALEL------ 449
           D+ G+ G ++ +  + + I S+  D V    +++  +H         AN   +L      
Sbjct: 480 DMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTG 539

Query: 450 -FYLMNEANVESDSITLVS---------ALSAASSLSILKKGKELNGF 487
            + LM+     S+    V           L   ++ S+++ G E++GF
Sbjct: 540 YYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGF 587


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 265/739 (35%), Positives = 419/739 (56%), Gaps = 8/739 (1%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N++++M  +  +   A ++F +M E+ DV  WN ++  Y  SG   EAL L+  M   G+
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPER-DVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGV 185

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YTF   L++C       +G E+HA  ++ G   +V V NAL+ MYA+CG +  A  
Sbjct: 186 RPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARK 245

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V   +   D +SWN+M+ G  +N      ++ F  +     +P+ +   +   ASG L +
Sbjct: 246 VFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSD 305

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           +   KE+H  A+K+GF  D+   N+L+ MYA    +     VF +M  +D ++WT +I+G
Sbjct: 306 VTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISG 365

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSD 395
           Y +N    KALE++  +++  +  D + I S L AC+ L  +    ++H     KG +S 
Sbjct: 366 YEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISY 425

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           +V+ NAI+++Y K   ID +  VF+ +  KDVVSW+SMI+ +  N    EAL  F  M  
Sbjct: 426 IVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-L 484

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
           A+V+ +S+T ++AL+A ++   L+ GKE++  ++R G   EG + ++L+D+Y +CG    
Sbjct: 485 ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGY 544

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A   F     KD++ W  MI     HG G  A+  F +M      PD +TF+ALL ACS 
Sbjct: 545 AWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSR 604

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
            G+++EG +    M   Y + P  +HYAC+VDLL RA  L EAY F+  M I P A VW 
Sbjct: 605 GGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWG 664

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL  CR+H + ELGE+ AK +L L+P + G +VL+ +++A +  W  + +VR  MR  G
Sbjct: 665 ALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKG 724

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           L    G SW+E+   +H+F+  D+SH +  EI   L  I E+++  G    ++    H  
Sbjct: 725 LDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVES----HCP 780

Query: 756 EEEE-KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           E+E  K  +  GHSERLA+A+G++ +T G+ I +TKN   C  CH   K++S +  R+++
Sbjct: 781 EDEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDII 840

Query: 815 VRDANRFHHFEAGVCSCGD 833
           VRD+ + HHF+ G CSCGD
Sbjct: 841 VRDSKQLHHFKDGSCSCGD 859



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 171/545 (31%), Positives = 294/545 (53%), Gaps = 7/545 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M  + G    A ++F K+ +R VF+WN M+G Y  +G     L+ Y RM   G+  D +T
Sbjct: 132 MLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYT 191

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV+++C  + D   G ++H  VL+ G+     ++N+L+ MYAKC D   AR++FD M 
Sbjct: 192 FPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSM- 250

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D + WN++I+ +  +G+C   L LF  M    +  N  T  +   A    S  T   
Sbjct: 251 TVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAK 310

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   VK G    V   N+LI MYA  G M +A  V  +++ +D+++W +M++G+ +N 
Sbjct: 311 EMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNG 370

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA++ +  ++     PD +   +A++A   LG+L  G +LH  A  +GF+S + + N
Sbjct: 371 FPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTN 430

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            +++MYAK   ++    VF  M  +D +SW+++IAG+  N+ + +AL  FR + L  +  
Sbjct: 431 AILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKP 489

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           + +   + L AC+    +   KEIH +++R G+  +  + NA++D+Y KCG   Y+   F
Sbjct: 490 NSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQF 549

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            +  +KDVVSW  MI+ +V +G  + AL  F  M +     D +T V+ L A S   ++ 
Sbjct: 550 CAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVS 609

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
           +G EL   +  K +++  ++   + +VD+ +R G L  A    N +  T D  +W +++N
Sbjct: 610 EGWELFHSMTEK-YSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLN 668

Query: 537 ANGLH 541
              +H
Sbjct: 669 GCRIH 673



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 247/462 (53%), Gaps = 6/462 (1%)

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           + A  + GQ  +AL L   ++      +   +VA  + CE       G+   A       
Sbjct: 63  LRALCSHGQLAQALWL---LESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHA 119

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
              + + NA+++M  R G+   A  V  ++  +D  SWN M+ G+ ++ L  +A+  +  
Sbjct: 120 WFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHR 179

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           +  AG +PD       + + G + +   G+E+HA+ ++ GF  ++ + N LM MYAKC  
Sbjct: 180 MMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGD 239

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           V    +VF  MT  D ISW  +IAG+ +N      LELF T+  + +  ++M I SV +A
Sbjct: 240 VMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVA 299

Query: 372 CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
              L  ++  KE+HG  +++G + D+   N+++ +Y   G +  +R VF  ++++D ++W
Sbjct: 300 SGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTW 359

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
           T+MIS Y  NG  ++ALE++ LM   NV  D IT+ SAL+A + L  L  G +L+     
Sbjct: 360 TAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAES 419

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
           KGF     V +++++MYA+   +D A +VF C+  KD++ W+SMI     + R   A+  
Sbjct: 420 KGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYY 479

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRC 591
           F  M A+   P+ +TF+A L AC+ +G +  GK+    ++RC
Sbjct: 480 FRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRC 520


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/625 (38%), Positives = 383/625 (61%), Gaps = 11/625 (1%)

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           ++  D  SWNS++    ++    +A+  F  ++     P +     A+ A   L ++ +G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K+ H  A   G+ SD+ + + L+ MY+ C  +    +VF ++  +D +SWT++I GY  N
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLN 155

Query: 341 NCHLKALELFRTVQL-EGLDADVMIIGS-----VLMACSGLKCMSQTKEIHGYIIRKGLS 394
              L A+ LF+ + + E  D D M + S     V+ ACS +     T+ IH ++I++G  
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215

Query: 395 DLV-ILNAIVDVYGKCGN--IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
             V + N ++D Y K G   +  +R +F+ I  KD VS+ S++S Y  +G++NEA E+F 
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275

Query: 452 -LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
            L+    V  ++ITL + L A S    L+ GK ++  +IR G   +  V +S++DMY +C
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G ++ A K F+ ++ K++  WT+MI   G+HG    A++LF  M      P++ITF+++L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            ACSH+GL  EG ++   M+  + ++P  EHY C+VDLLGRA  L++AY  ++ M+++P 
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455

Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
           + +W +LL ACR+H N EL EI   +L ELD  N G Y+L+S+++A + +WKDVE+VRM 
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
           M+  GL K PG S +E+  ++H F+  D+ H + ++IY+ LAE+  KL  E GYV+ T  
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL-LEAGYVSNTSS 574

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
           V H+V+EEEK   L  HSE+LAIA+G++ +  GS + + KNLRVC DCH+  KL+S++  
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVD 634

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           RE VVRDA RFHHF+ G CSCGDYW
Sbjct: 635 REFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/472 (31%), Positives = 253/472 (53%), Gaps = 15/472 (3%)

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           LF+R  +K DV  WNS+I+  + SG   EAL  F  M+++ L     +F  A++AC  S 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS-SL 89

Query: 175 FETL-GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
           F+   G + H      G    ++V++ALI MY+ CGK+ +A  V  ++  +D VSW SM+
Sbjct: 90  FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMI 149

Query: 234 TGFVQNDLYCKAMQFFREL------QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
            G+  N     A+  F++L             D +  V+ +SA  R+      + +H++ 
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209

Query: 288 IKQGFVSDLQIGNTLMDMYAKC--CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
           IK+GF   + +GNTL+D YAK     V    ++F Q+  +D +S+ +I++ YAQ+    +
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 346 ALELFRT-VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIV 403
           A E+FR  V+ + +  + + + +VL+A S    +   K IH  +IR GL D VI+  +I+
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y KCG ++ +R  F+ +++K+V SWT+MI+ Y  +G A +ALELF  M ++ V  + I
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389

Query: 464 TLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
           T VS L+A S   +  +G +  N    R G          +VD+  R G L  A  +   
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449

Query: 523 VQTK-DLILWTSMINANGLHGRGKVA-IDLFYKMEAESFAPDHITFLALLYA 572
           ++ K D I+W+S++ A  +H   ++A I +    E +S    +   L+ +YA
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA 501



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 228/446 (51%), Gaps = 34/446 (7%)

Query: 14  LFDKVSQRT-VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           LF++   +T VF+WN+++     +G+    L  +S MR L +     +FPC IKAC+ L 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D+  G + H      GY S  F+ ++L+ MY+ C     AR++FD +  K D+V W S+I
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI-PKRDIVSWTSMI 149

Query: 133 SAYSASGQCLEALGLFREM------QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
             Y  +G  L+A+ LF+++          +  ++   V+ + AC     + L   IH+  
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209

Query: 187 VKSGQNLQVYVANALIAMYARCGK--MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
           +K G +  V V N L+  YA+ G+  +  A  +  Q+ +KD VS+NS+++ + Q+ +  +
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRL------GNLLNGKELHAYAIKQGFVSDLQI 298
           A + FR L       ++V T NA++ S  L      G L  GK +H   I+ G   D+ +
Sbjct: 270 AFEVFRRLV-----KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G +++DMY KC  V    + F +M  ++  SWT +IAGY  +    KALELF  +   G+
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             + +   SVL ACS       G +  +  K   G  +  GL        +VD+ G+ G 
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG--VEPGLEH---YGCMVDLLGRAGF 439

Query: 412 IDYSRNVFESIESK-DVVSWTSMISS 436
           +  + ++ + ++ K D + W+S++++
Sbjct: 440 LQKAYDLIQRMKMKPDSIIWSSLLAA 465



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 205/422 (48%), Gaps = 18/422 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV------LGI 54
           MY  CG + DA ++FD++ +R + +W +M+  Y  NG  L  +  +  + V        +
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD--FRKA 112
            +D+     VI AC+ +        IH  V+K G+D    + N+L+  YAK  +     A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACE 171
           R++FD++ +K D V +NSI+S Y+ SG   EA  +FR + +  +VT NA T    L A  
Sbjct: 240 RKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            S    +G  IH   ++ G    V V  ++I MY +CG++  A     +++NK+  SW +
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQ 290
           M+ G+  +    KA++ F  +  +G +P+ +  V+ ++A    G  + G +  +A   + 
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRF 418

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALE 348
           G    L+    ++D+  +   +     +  +M  + D I W++++A      N  L  + 
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEIS 478

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSG-LKCMSQTKEI---HGYIIRKGLSDLVILNAIVD 404
           + R  +L+  +    ++ S + A +G  K + + + I    G +   G S L+ LN  V 
Sbjct: 479 VARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFS-LLELNGEVH 537

Query: 405 VY 406
           V+
Sbjct: 538 VF 539


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 239/644 (37%), Positives = 378/644 (58%), Gaps = 35/644 (5%)

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           S  WN ++T + + +    A+  + +L+    + D     + + A G++     GKE+H 
Sbjct: 89  SAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHG 148

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
           + +K+G   D+ +GN LM MY +C CV Y   VF +M  +D +SW+T+I   ++N     
Sbjct: 149 FVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDM 208

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD---LVILNAI 402
           ALEL R +    +    + + S++   +    M   K +H Y+IR   ++   +    A+
Sbjct: 209 ALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTAL 268

Query: 403 VDVYGKCGNI-------------------------------DYSRNVFESIESKDVVSWT 431
           +D+Y KCG++                               + +R +F+S +++DV+ WT
Sbjct: 269 LDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWT 328

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           +M+S+Y      ++A  LF  M  + V    +T+VS LS  +    L  GK ++ +I ++
Sbjct: 329 AMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE 388

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
              ++  + ++LVDMYA+CG ++ A ++F    ++D+ +W ++I    +HG G+ A+D+F
Sbjct: 389 RVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIF 448

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
            +ME +   P+ ITF+ LL+ACSH+GL+ EGKK  E M   + L P  EHY C+VDLLGR
Sbjct: 449 AEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGR 508

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
           A  L+EA++ ++SM I+P   VW AL+ ACR+H N +LGE+ A +LLE++P N G  VL+
Sbjct: 509 AGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLM 568

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           SN++AA+ +W D   VR  M+  G+KK PG S IE+   +H F+  D+SH +   I + L
Sbjct: 569 SNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEML 628

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKN 791
           AE+  KL  E GYV  T  VL N++EEEK   L  HSE+LA+A+G++ +   + IRI KN
Sbjct: 629 AEMRRKLN-EAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKN 687

Query: 792 LRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           LRVC DCH+  KL+S+++GR ++VRD NRFHHF  G CSCGDYW
Sbjct: 688 LRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 233/471 (49%), Gaps = 41/471 (8%)

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           WN +I++Y+   Q   AL ++ +++++    + +   + L+AC   S+  LG EIH   +
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
           K G +  V+V NAL+ MY  C  +  A  V  ++  +D VSW++M+    +N  +  A++
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211

Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT--LMDM 305
             RE+     +P +V  V+ V+      N+  GK +HAY I+      + +  T  L+DM
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAG----------------------------- 336
           YAKC  +    ++F  +T +  +SWT +IAG                             
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAML 331

Query: 337 --YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
             YAQ NC  +A  LF  ++  G+    + I S+L  C+    +   K +H YI ++ + 
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 391

Query: 395 DLVILN-AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
              ILN A+VD+Y KCG+I+ +  +F    S+D+  W ++I+ +  +G   EAL++F  M
Sbjct: 392 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 451

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCG 511
               V+ + IT +  L A S   ++ +GK+L   ++   F L   +     +VD+  R G
Sbjct: 452 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHT-FGLVPQIEHYGCMVDLLGRAG 510

Query: 512 ALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAES 558
            LD A+++   +  K + I+W +++ A  LH     G++A     ++E E+
Sbjct: 511 LLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPEN 561



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 226/448 (50%), Gaps = 39/448 (8%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           WN ++ +Y    +P   L  Y+++R +   VD F  P V+KAC  +     G +IHG VL
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
           K G D   F+ N+L+ MY +C     AR +FD+M E+ DVV W+++I + S + +   AL
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER-DVVSWSTMIRSLSRNKEFDMAL 210

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN--LQVYVANALIA 203
            L REM  + +  +    V+ +    D++   +G  +HA  +++  N  + V    AL+ 
Sbjct: 211 ELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLD 270

Query: 204 MYARCG-------------------------------KMTEAAGVLYQLENKDSVSWNSM 232
           MYA+CG                               ++ EA  +    +N+D + W +M
Sbjct: 271 MYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAM 330

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           L+ + Q +   +A   F +++ +G +P +V  V+ +S     G L  GK +H+Y  K+  
Sbjct: 331 LSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERV 390

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
             D  +   L+DMYAKC  +N  GR+F +  ++D   W  II G+A +    +AL++F  
Sbjct: 391 EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAE 450

Query: 353 VQLEGLDA-DVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GL-SDLVILNAIVDVYGKC 409
           ++ +G+   D+  IG +L ACS    +++ K++   ++   GL   +     +VD+ G+ 
Sbjct: 451 MERQGVKPNDITFIG-LLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 509

Query: 410 GNIDYSRNVFESIESK-DVVSWTSMISS 436
           G +D +  + +S+  K + + W +++++
Sbjct: 510 GLLDEAHEMIKSMPIKPNTIVWGALVAA 537



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 172/359 (47%), Gaps = 51/359 (14%)

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P  + T     +   L  L   K++HA+ IK  F   LQI   L D  +           
Sbjct: 38  PTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQI--PLNDFPSG---------- 85

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
               +AQ    W  +I  Y + N    AL ++  ++    + D  +  SVL AC  +   
Sbjct: 86  -LSPSAQ----WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWT 140

Query: 379 SQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
              KEIHG++++KGL  D+ + NA++ +YG+C  ++Y+R VF+ +  +DVVSW++MI S 
Sbjct: 141 QLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSL 200

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             N   + ALEL   MN   V    + +VS ++  +  + ++ GK ++ ++IR   N   
Sbjct: 201 SRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHM 260

Query: 498 SVASS--LVDMYARCGALDIANKVFN----------------CV---------------Q 524
            V ++  L+DMYA+CG L +A ++FN                C+               Q
Sbjct: 261 GVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQ 320

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
            +D+++WT+M++A         A +LF +M      P  +T ++LL  C+ +G ++ GK
Sbjct: 321 NRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGK 379



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 161/370 (43%), Gaps = 34/370 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYG+C  V  A  +FDK+ +R V +W+ M+ +   N E    LE    M  + +      
Sbjct: 168 MYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVA 227

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI--VNSLVAMYAKCYDFRKARQLFDR 118
              ++   A   ++  G  +H  V++   +    +    +L+ MYAKC     ARQLF+ 
Sbjct: 228 MVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNG 287

Query: 119 MGEK------------------------------EDVVLWNSIISAYSASGQCLEALGLF 148
           + +K                               DV++W +++SAY+ +    +A  LF
Sbjct: 288 LTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLF 347

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            +M+  G+     T V+ L  C  +    LG  +H+   K    +   +  AL+ MYA+C
Sbjct: 348 DQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKC 407

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G +  A  +  +  ++D   WN+++TGF  +    +A+  F E++  G KP+ +  +  +
Sbjct: 408 GDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLL 467

Query: 269 SASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-D 326
            A    G +  GK+L    +   G V  ++    ++D+  +   ++    +   M  + +
Sbjct: 468 HACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPN 527

Query: 327 FISWTTIIAG 336
            I W  ++A 
Sbjct: 528 TIVWGALVAA 537



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 161/366 (43%), Gaps = 40/366 (10%)

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           L  + QTK+IH +II+                     +    N F S  S     W  +I
Sbjct: 53  LSTLEQTKQIHAHIIKTHFHHA---------------LQIPLNDFPSGLSPSA-QWNFVI 96

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           +SY        AL ++  + + + E D+    S L A   +S  + GKE++GF+++KG +
Sbjct: 97  TSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLD 156

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            +  V ++L+ MY  C  ++ A  VF+ +  +D++ W++MI +   +    +A++L  +M
Sbjct: 157 RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM 216

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRAN 613
                 P  +  ++++   + +  +  GK     ++R              L+D+  +  
Sbjct: 217 NFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCG 276

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISN 673
           HL  A Q    +  + T   W A++  C + SN+ L E  A+ L   D     + ++ + 
Sbjct: 277 HLGLARQLFNGL-TQKTVVSWTAMIAGC-IRSNR-LEE--ARAL--FDSTQNRDVMIWTA 329

Query: 674 VFAASRKWKDVEQ---VRMRMRGSGLKKTPGS-----------SWIEIGNKIHSFIARDK 719
           + +A  +   ++Q   +  +MR SG++ T  +             +++G  +HS+I  DK
Sbjct: 330 MLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYI--DK 387

Query: 720 SHSESD 725
              E D
Sbjct: 388 ERVEVD 393


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/741 (35%), Positives = 406/741 (54%), Gaps = 60/741 (8%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N++++ Y +   F  AR LFD+M E+ D+  WN +++ Y  + +  EA  LF  M +  +
Sbjct: 81  NAMISGYLRNAKFSLARDLFDKMPER-DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDV 139

Query: 157 VT-NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           V+ NA     A     D + E      H  ++           N L+A Y   G++ EA 
Sbjct: 140 VSWNAMLSGYAQNGFVDEAREVFNKMPHRNSIS---------WNGLLAAYVHNGRLKEAR 190

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            +     N + +SWN ++ G+V+ ++   A Q F  +                       
Sbjct: 191 RLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMP---------------------- 228

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
                            V D+   NT++  YA+   ++   R+F +   +D  +WT +++
Sbjct: 229 -----------------VRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVS 271

Query: 336 GYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           GY QN    +A + F  + ++  +  + M+ G V       K M    E+   +  + +S
Sbjct: 272 GYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQ-----YKKMVIAGELFEAMPCRNIS 326

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
                N ++  YG+ G I  +R +F+ +  +D VSW ++IS Y  NG   EAL +F  M 
Sbjct: 327 SW---NTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMK 383

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
                S+  T   ALS  + ++ L+ GK+++G +++ GF     V ++L+ MY +CG+ D
Sbjct: 384 RDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTD 443

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            AN VF  ++ KD++ W +MI     HG G+ A+ LF  M+     PD IT + +L ACS
Sbjct: 444 EANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACS 503

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           HSGLI+ G ++   M  DY + P  +HY C++DLLGRA  LEEA   +R+M  +P A  W
Sbjct: 504 HSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASW 563

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALLGA R+H N ELGE  A+ + +++P N G YVL+SN++AAS +W DV ++R +MR +
Sbjct: 564 GALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREA 623

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           G++K  G SW+E+ NKIH+F   D  H E D IY  L E+  K+ RE GYV+ T+ VLH+
Sbjct: 624 GVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRRE-GYVSSTKLVLHD 682

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           VEEEEK  ML  HSE+LA+A+G+L    G  IR+ KNLRVC DCH+  K +S++ GR ++
Sbjct: 683 VEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLII 742

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RD++RFHHF  G+CSCGDYW
Sbjct: 743 LRDSHRFHHFSEGICSCGDYW 763



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 150/592 (25%), Positives = 281/592 (47%), Gaps = 58/592 (9%)

Query: 17  KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFTFPCVIKA-CAMLKDL 74
           K     + TWN  + +++ NG     L  ++ M R   +S +A     +  A  ++ +DL
Sbjct: 40  KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDL 99

Query: 75  DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
                   L          F  N ++  Y +     +A +LFD M  K+DVV WN+++S 
Sbjct: 100 FDKMPERDL----------FSWNVMLTGYVRNRRLGEAHKLFDLM-PKKDVVSWNAMLSG 148

Query: 135 YSASGQCLEALGLFREMQRVGLVT-----NAYTFVAALQACE-----DSSFE------TL 178
           Y+ +G   EA  +F +M     ++      AY     L+         S++E       +
Sbjct: 149 YAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLM 208

Query: 179 GMEIHAATVKSGQNL-------QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           G  +    +   + L        V   N +I+ YA+ G +++A  +  +   +D  +W +
Sbjct: 209 GGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTA 268

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL--HAYAIK 289
           M++G+VQN +  +A ++F          D++   N +S +  L   +  K++       +
Sbjct: 269 MVSGYVQNGMVDEARKYF----------DEMPVKNEISYNAMLAGYVQYKKMVIAGELFE 318

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
                ++   NT++  Y +   +    ++F  M  +D +SW  II+GYAQN  + +AL +
Sbjct: 319 AMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNM 378

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
           F  ++ +G  ++       L  C+ +  +   K++HG +++ G  +   + NA++ +Y K
Sbjct: 379 FVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFK 438

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           CG+ D + +VFE IE KDVVSW +MI+ Y  +G   +AL LF  M +A V+ D IT+V  
Sbjct: 439 CGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGV 498

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQT 525
           LSA S   ++ +G E   + + + +N++ +    + ++D+  R G L+ A N + N    
Sbjct: 499 LSACSHSGLIDRGTEY-FYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFD 557

Query: 526 KDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
                W +++ A+ +HG    G+ A ++ +KME ++        L+ LYA S
Sbjct: 558 PGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQN--SGMYVLLSNLYAAS 607



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 186/386 (48%), Gaps = 32/386 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +  A++LF++   R VFTW AM+  YV NG      + +  M V     +  ++
Sbjct: 242 YAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPV----KNEISY 297

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++      K +    ++    + C   S+    N+++  Y +     +AR+LFD M +
Sbjct: 298 NAMLAGYVQYKKMVIAGELFE-AMPCRNISS---WNTMITGYGQNGGIAQARKLFDMMPQ 353

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D V W +IIS Y+ +G   EAL +F EM+R G  +N  TF  AL  C D +   LG +
Sbjct: 354 R-DCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQ 412

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   VK+G     +V NAL+ MY +CG   EA  V   +E KD VSWN+M+ G+ ++  
Sbjct: 413 VHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGF 472

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F  ++ AG KPD++  V  +SA    G +  G E + Y++ + +       N 
Sbjct: 473 GRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTE-YFYSMDRDY-------NV 524

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFI----------SWTTII-AGYAQNNCHL--KALE 348
                   C ++ +GR      A++ +          SW  ++ A     N  L  KA E
Sbjct: 525 KPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAE 584

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSG 374
           +    ++E  ++ + ++ S L A SG
Sbjct: 585 M--VFKMEPQNSGMYVLLSNLYAASG 608



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 41/79 (51%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS  +A  +F+ + ++ V +WN M+  Y  +G   + L  +  M+  G+  D  T
Sbjct: 435 MYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEIT 494

Query: 61  FPCVIKACAMLKDLDCGAK 79
              V+ AC+    +D G +
Sbjct: 495 MVGVLSACSHSGLIDRGTE 513


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/739 (35%), Positives = 422/739 (57%), Gaps = 8/739 (1%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N++++M  +  +   A ++F +M E+ DV  WN ++  Y  +G   EAL L+  M   G+
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPER-DVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGV 191

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YTF   L++C       +G E+HA  ++ G   +V V NAL+ MYA+CG +  A  
Sbjct: 192 RPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARK 251

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V   +   D +SWN+M+ G  +N      ++ F  +     +P+ +   +   ASG L +
Sbjct: 252 VFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSD 311

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           +   KE+H  A+K+GF +D+   N+L+ MYA    +     VF +M  +D +SWT +I+G
Sbjct: 312 ITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISG 371

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSD 395
           Y +N    KALE++  +++  +  D + I S L AC+ L  +    ++H     KG +S 
Sbjct: 372 YEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSY 431

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           +V+ NA++++Y K   ID +  VF+ +  KDVVSW+SMI+ +  N    EAL  F  M  
Sbjct: 432 VVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-L 490

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
           A+V+ +S+T ++AL+A ++   L+ GKE++  ++R G   EG + ++L+D+Y +CG    
Sbjct: 491 ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGY 550

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A   F     KD++ W  MI     HG G+ A+  F +M      PD +TF+ALL ACS 
Sbjct: 551 AWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSR 610

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
            G+++EG +    M   Y + P  +HYAC+VDLL R   L EAY F+  M I P A VW 
Sbjct: 611 GGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWG 670

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL  CR+H + ELGE+ AK +LEL+P + G +VL+ +++A +  W  + +VR  MR  G
Sbjct: 671 ALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKG 730

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           L    G SW+E+   +H+F+  D+SH +  EI   L  I E+++  G    ++    H+ 
Sbjct: 731 LDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVES----HSP 786

Query: 756 EEEE-KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           E++  K  +  GHSERLA+A+G++ +T G+ I +TKN   C  CH   K++S +  R+++
Sbjct: 787 EDKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYIVRRDII 846

Query: 815 VRDANRFHHFEAGVCSCGD 833
           VRD+ + HHF+ G CSCGD
Sbjct: 847 VRDSKQVHHFKDGSCSCGD 865



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 185/597 (30%), Positives = 316/597 (52%), Gaps = 14/597 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M  + G    A ++F K+ +R VF+WN M+G Y   G     L+ Y RM   G+  D +T
Sbjct: 138 MLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYT 197

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV+++C  + D   G ++H  VL+ G+     ++N+L+ MYAKC D   AR++FD M 
Sbjct: 198 FPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMA 257

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D + WN++I+ +  +G+C   L LF  M +  +  N  T  +   A    S  T   
Sbjct: 258 VM-DCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAK 316

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   VK G    V   N+LI MYA  G M +A  V  +++ +D++SW +M++G+ +N 
Sbjct: 317 EMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNG 376

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA++ +  ++     PD +   +A++A   LG+L  G +LH  A  +GF+S + + N
Sbjct: 377 FPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTN 436

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++MYAK   ++    VF  M  +D +SW+++IAG+  N+ + +AL  FR + L  +  
Sbjct: 437 ALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKP 495

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           + +   + L AC+    +   KEIH +++R G++ +  + NA++D+Y KCG   Y+   F
Sbjct: 496 NSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQF 555

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            +  +KDVVSW  MI+ +V +G    AL  F  M +     D +T V+ L A S   ++ 
Sbjct: 556 CAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVS 615

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
           +G EL   +  K +++  ++   + +VD+ +R G L  A    N +  T D  +W +++N
Sbjct: 616 EGWELFHSMTDK-YSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLN 674

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
              +H     G++A    Y +E E     +   L  LYA   +G+ ++  +  + MR
Sbjct: 675 GCRIHRHVELGELAAK--YVLELEPNDAGYHVLLCDLYA--DAGIWDKLARVRKTMR 727



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 245/462 (53%), Gaps = 6/462 (1%)

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           + A  + GQ  +AL L   ++      +   +VA  + CE       G+   A       
Sbjct: 69  LRALCSHGQLAQALWL---LESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHA 125

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
              + + NA+++M  R G+   A  V  ++  +D  SWN M+ G+ +  L  +A+  +  
Sbjct: 126 WFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHR 185

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           +  AG +PD       + + G + +   G+E+HA+ ++ GF  ++ + N LM MYAKC  
Sbjct: 186 MMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGD 245

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           V    +VF  M   D ISW  +IAG+ +N      LELF T+  + +  ++M I SV +A
Sbjct: 246 VVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVA 305

Query: 372 CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
              L  ++  KE+HG  +++G  +D+   N+++ +Y   G +  +R VF  ++++D +SW
Sbjct: 306 SGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSW 365

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
           T+MIS Y  NG  ++ALE++ LM   NV  D IT+ SAL+A + L  L  G +L+     
Sbjct: 366 TAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAES 425

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
           KGF     V ++L++MYA+   +D A +VF C+  KD++ W+SMI     + R   A+  
Sbjct: 426 KGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYY 485

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRC 591
           F  M A+   P+ +TF+A L AC+ +G +  GK+    ++RC
Sbjct: 486 FRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRC 526


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/763 (32%), Positives = 432/763 (56%), Gaps = 4/763 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG +  A + F ++ +R V +WN+++  ++ NGE  + ++ +  M   G+  D  + 
Sbjct: 125 YASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASL 184

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+KAC  L++ D G ++HGLV+K G+D      ++L+ MYAKC     +  +F  + E
Sbjct: 185 AVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPE 244

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K + V W+++I+    + + +E L LF+EMQ VG+  +   + +  ++C   S   LG E
Sbjct: 245 K-NWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKE 303

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H+  +KS     + V  A + MYA+CG+M +A  VL  +      S+N+++ G+ ++D 
Sbjct: 304 LHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDR 363

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ F+ L   G   D++    A++A   +   L G+++H  A+K   +S++ + N 
Sbjct: 364 GFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANA 423

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++DMY KC  +     +F  M  +D +SW  IIA   QN    + L  F ++    ++ D
Sbjct: 424 ILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPD 483

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
               GSVL AC+G + ++   EIH  II+ G+  D  +  A+VD+Y KCG I+ +  + +
Sbjct: 484 DFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHD 543

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
             E K +VSW ++IS +     + +A + F  M E  V  D+ T  + L   ++L+ +  
Sbjct: 544 RTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGL 603

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++  II++    +  + S+LVDMY++CG +  +  +F     +D + W +M+     
Sbjct: 604 GKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAH 663

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG G+ A+ LF  M+  +  P+H TF+++L AC+H GL+++G  + ++M  +Y LDP  E
Sbjct: 664 HGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSE 723

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY+C+VD+LGR+  ++EA   V+ M  E  A +W  LL  C++H N E+ E   + LL+L
Sbjct: 724 HYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQL 783

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP +    VL+SN++A +  W +V ++R  MR + LKK PG SWIE+ +++H+F+  DK 
Sbjct: 784 DPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKG 843

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
           H   +EIY+KL  +  +++   GY+     VL + E EE  Q+
Sbjct: 844 HPRDEEIYEKLGVLIGEMQSV-GYIPDCD-VLLDEEVEEPAQL 884



 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 175/593 (29%), Positives = 312/593 (52%), Gaps = 38/593 (6%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  + + C+    L+ G + H  ++ CG++ T F+ N L+ MY KC     A ++FD+M
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 120 ------------------GE------------KEDVVLWNSIISAYSASGQCLEALGLFR 149
                             GE            + DVV WNS+IS +  +G+C +++ +F 
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EM R G+  +  +    L+AC       +G+++H   VK G +  V   +AL+ MYA+C 
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
           ++ ++  V  +L  K+ VSW++M+ G VQND   + ++ F+E+QG G    Q    +   
Sbjct: 231 RLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFR 290

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           +   L  L  GKELH++A+K  F SD+ +G   +DMYAKC  +    +V   M      S
Sbjct: 291 SCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQS 350

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           +  II GYA+++   +AL+ F+ +   GL  D + +   L AC+ ++   + +++HG  +
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410

Query: 390 RK-GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           +   +S++ + NAI+D+YGKC  +  + ++F+ +E +D VSW ++I++   NG   E L 
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLA 470

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
            F  M  + +E D  T  S L A +    L  G E++  II+ G   +  V ++LVDMY 
Sbjct: 471 HFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYC 530

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           +CG ++ A+K+ +  + K ++ W ++I+   L  + + A   F +M      PD+ T+ A
Sbjct: 531 KCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAA 590

Query: 569 LLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYAC--LVDLLGRANHLEEA 618
           +L  C++   +  GK+   +I++ + Q D     Y C  LVD+  +  +++++
Sbjct: 591 VLDTCANLATVGLGKQIHAQIIKQELQSDV----YICSTLVDMYSKCGNMQDS 639



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 161/553 (29%), Positives = 280/553 (50%), Gaps = 10/553 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  + D+  +F ++ ++   +W+AM+   V N   +  LE +  M+ +G+ V    
Sbjct: 225 MYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSI 284

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  + ++CA L  L  G ++H   LK  + S   +  + + MYAKC     A+++   M 
Sbjct: 285 YASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSM- 343

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  +  +N+II  Y+ S +  +AL  F+ + + GL  +  T   AL AC     +  G 
Sbjct: 344 PKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGR 403

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   VKS     + VANA++ MY +C  + EA+ +   +E +D+VSWN+++    QN 
Sbjct: 404 QVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNG 463

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              + +  F  +  +  +PD     + + A      L  G E+H   IK G   D  +G 
Sbjct: 464 NEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGA 523

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY KC  +    ++  +   +  +SW  II+G++       A + F  +   G++ 
Sbjct: 524 ALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNP 583

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     +VL  C+ L  +   K+IH  II++ L SD+ I + +VD+Y KCGN+  S+ +F
Sbjct: 584 DNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMF 643

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E   ++D V+W +M+  Y H+GL  EAL+LF  M   NV+ +  T VS L A + + ++ 
Sbjct: 644 EKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVD 703

Query: 480 KGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQT----KDLILWTSM 534
           KG      ++ + G + +    S +VD+  R G +D A    N VQ      D ++W ++
Sbjct: 704 KGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEA---LNLVQKMPFEADAVIWRNL 760

Query: 535 INANGLHGRGKVA 547
           ++   +HG  +VA
Sbjct: 761 LSVCKIHGNVEVA 773



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 247/473 (52%), Gaps = 6/473 (1%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N++I+ YA CG+M  A    Y++  +D VSWNS+++GF+QN    K++  F E+   G  
Sbjct: 119 NSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVG 178

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
            D+      + A G L     G ++H   +K GF  D+  G+ L+ MYAKC  ++    V
Sbjct: 179 FDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSV 238

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F ++  ++++SW+ +IAG  QN+ +++ LELF+ +Q  G+     I  S+  +C+ L  +
Sbjct: 239 FSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSAL 298

Query: 379 SQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
              KE+H + ++    SD+++  A +D+Y KCG +  ++ V  S+    + S+ ++I  Y
Sbjct: 299 RLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGY 358

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             +    +AL+ F L+ +  +  D ITL  AL+A +S+    +G++++G  ++       
Sbjct: 359 ARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNI 418

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            VA++++DMY +C AL  A+ +F+ ++ +D + W ++I A   +G  +  +  F  M   
Sbjct: 419 CVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHS 478

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
              PD  T+ ++L AC+    +N G +    I++     D +    A LVD+  +   +E
Sbjct: 479 RMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVG--AALVDMYCKCGMIE 536

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV 669
           +A + +     + T   W A++    +    E       ++LE+   NP N+ 
Sbjct: 537 KADK-IHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGV-NPDNFT 587



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 192/429 (44%), Gaps = 35/429 (8%)

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           Q   Q P ++ T + +       N LN GK+ HA  I  GF     + N LM MY KC  
Sbjct: 40  QNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLY 99

Query: 312 VNYMGRVF-------------------------------YQMTAQDFISWTTIIAGYAQN 340
           ++Y  +VF                               Y+M  +D +SW ++I+G+ QN
Sbjct: 100 LDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQN 159

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVIL 399
               K++++F  +   G+  D   +  VL AC  L+      ++HG +++ G   D+V  
Sbjct: 160 GECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTG 219

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           +A++ +Y KC  +D S +VF  +  K+ VSW++MI+  V N    E LELF  M    V 
Sbjct: 220 SALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVG 279

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
                  S   + ++LS L+ GKEL+   ++  F  +  V ++ +DMYA+CG +  A KV
Sbjct: 280 VSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKV 339

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
            + +    L  + ++I       RG  A+  F  +       D IT    L AC+     
Sbjct: 340 LSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGD 399

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
            EG++   +      +       A ++D+ G+   L EA      M+    A  W A++ 
Sbjct: 400 LEGRQVHGLAVKSISMSNICVANA-ILDMYGKCKALAEASDLFDMME-RRDAVSWNAIIA 457

Query: 640 ACRVHSNKE 648
           AC  + N+E
Sbjct: 458 ACEQNGNEE 466


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 226/582 (38%), Positives = 376/582 (64%), Gaps = 9/582 (1%)

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
           Q C +  +SA+ R  +L +  ++H   +  GF  D  +   L++M+++   V+   +VF 
Sbjct: 70  QTCELLILSAARR-NSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFD 128

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC--- 377
           +   +    W  +    A        LEL+  + + G+ +D      +L AC   +C   
Sbjct: 129 KTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVS 188

Query: 378 -MSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            + + KEIH +I+R G    V ++  ++D+Y + G + Y+  VF+ +  K+VVSW++MI+
Sbjct: 189 FLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIA 248

Query: 436 SYVHNGLANEALELF--YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
            Y  NG   EALELF   ++N  +   +S+T+VS L A ++ + L++GK ++ +I+R+G 
Sbjct: 249 CYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGL 308

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
           +    V S+L+ MYARCG L+    +F+ +  KD++LW S+I++ GLHG G+ AI +F +
Sbjct: 309 DSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEE 368

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           M    F+P HI+F+++L ACSH+GL+ EGKK  E M  ++ + P  EHYAC+VDLLGRAN
Sbjct: 369 MIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRAN 428

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISN 673
            L+EA + +  ++IEP  +VW +LLGACR+H + EL E  +K+L +L+P N GNYVL+++
Sbjct: 429 RLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLAD 488

Query: 674 VFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
           ++A +  W +V++V+  +    L+K PG SWIE+  KI+SF + D+ + + ++++  L  
Sbjct: 489 IYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVN 548

Query: 734 ITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLR 793
           ++ ++ ++ GY  QT+ VL+++++EEK +++ GHSE+LA+A+G++ +++G  IRITKNLR
Sbjct: 549 LSNEM-KQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLR 607

Query: 794 VCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +C DCHS  K +S+   RE++VRD NRFHHF+ GVCSCGDYW
Sbjct: 608 LCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 174/323 (53%), Gaps = 15/323 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ +  +V +A ++FDK  +RT++ WNA+  A    G    VLE Y RM ++G+S D FT
Sbjct: 113 MFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFT 172

Query: 61  FPCVIKACA----MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           +  ++KAC     ++  L  G +IH  +L+ GY +   ++ +L+ MYA+      A  +F
Sbjct: 173 YTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVF 232

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACEDSS 174
           D M  K +VV W+++I+ Y+ +G+  EAL LFREM       V N+ T V+ LQAC   +
Sbjct: 233 DEMPVK-NVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFA 291

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  IHA  ++ G +  + V +ALI MYARCGK+     +  ++  KD V WNS+++
Sbjct: 292 ALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLIS 351

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            +  +    KA++ F E+   G  P  +  ++ + A    G +  GK+L    +K+  + 
Sbjct: 352 SYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGI- 410

Query: 295 DLQIGNTLMDMYAKCCCVNYMGR 317
                   ++ YA  C V+ +GR
Sbjct: 411 -----QPSVEHYA--CMVDLLGR 426



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 205/407 (50%), Gaps = 15/407 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +I + A    L     +H L++  G+D   F+   L+ M+++      AR++FD+   K 
Sbjct: 75  LILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKT-RKR 133

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS----SFETLG 179
            + +WN++  A + +G+  + L L+  M  +G+ ++ +T+   L+AC  S    SF   G
Sbjct: 134 TIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKG 193

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            EIHA  ++ G    V+V   L+ MYAR G ++ A+ V  ++  K+ VSW++M+  + +N
Sbjct: 194 KEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKN 253

Query: 240 DLYCKAMQFFRE--LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
               +A++ FRE  L      P+ V  V+ + A      L  GK +HAY +++G  S L 
Sbjct: 254 GKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILP 313

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + + L+ MYA+C  +     +F +M  +D + W ++I+ Y  +    KA+++F  +   G
Sbjct: 314 VISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHG 373

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILNA-IVDVYGKCGNIDYS 415
                +   SVL ACS    + + K++   ++++ G+   V   A +VD+ G+   +D +
Sbjct: 374 FSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEA 433

Query: 416 RNVFES--IESKDVVSWTSMISS---YVHNGLANEALELFYLMNEAN 457
             + E   IE    V W S++ +   + H  LA  A +  + +   N
Sbjct: 434 AKIIEDLRIEPGPKV-WGSLLGACRIHCHVELAERASKRLFKLEPTN 479


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/559 (40%), Positives = 357/559 (63%), Gaps = 4/559 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +HA+ IK  ++  + +   L+ +Y KC C+     VF +M  ++ +SWT +I+GY+Q
Sbjct: 29  GQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQ 88

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL 399
                +AL LF  +     + +     +VL +C+G       ++IH +I ++   + + +
Sbjct: 89  RGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFV 148

Query: 400 -NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            ++++D+Y K G I  +R VFE +  +DVVS T++IS Y   GL  EALELF  +    +
Sbjct: 149 GSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGM 208

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
            S+ +T  S L+A S L+ L  GK+++  ++R        + +SL+DMY++CG L+ A K
Sbjct: 209 SSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARK 268

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSG 577
           +FN +  + +I W +M+     HG+G   + LF  M  E+   PD +TFLA+L  CSH G
Sbjct: 269 IFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGG 328

Query: 578 LINEG-KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           L ++G + F E+M    +++   EHY C++DLLGRA  +EEA++ ++ M  EPTA +W +
Sbjct: 329 LEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGS 388

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LLGACRVHSN  +GE V  +LLE++P N GNYV++SN++A++ +W+DV  VR  M    +
Sbjct: 389 LLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAV 448

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
            K PG SWIE+   IH+F A D+SH   +E++ K+ E+  K  +E GYV     VL++V+
Sbjct: 449 IKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKF-KESGYVPDQSCVLYDVD 507

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EE+K ++L GHSE+LA+A+G++ ++EG  +R+ KNLR+CVDCH+F K VS+++GR++ +R
Sbjct: 508 EEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIR 567

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D NRFHH   G+CSCGDYW
Sbjct: 568 DKNRFHHVAGGICSCGDYW 586



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 201/393 (51%), Gaps = 6/393 (1%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M + G  +    +  ++  C   + +  G ++H  ++K  Y    ++   L+ +Y KC  
Sbjct: 1   MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              AR +FD M E+ +VV W ++IS YS  G   EAL LF +M R     N +TF   L 
Sbjct: 61  LGCARHVFDEMRER-NVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLS 119

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           +C   S   LG +IH+   K      ++V ++L+ MYA+ G++ EA GV   L  +D VS
Sbjct: 120 SCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVS 179

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
             ++++G+ Q  L  +A++ F  LQ  G   + V   + ++A   L  L +GK++H++ +
Sbjct: 180 CTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVL 239

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           +      + + N+L+DMY+KC  +NY  ++F  M  +  ISW  ++ GY+++   ++ ++
Sbjct: 240 RCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVK 299

Query: 349 LFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG---LSDLVILNAIVD 404
           LF+ ++ E  +  D +   +VL  CS      +  E+   ++  G    + +     ++D
Sbjct: 300 LFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVID 359

Query: 405 VYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
           + G+ G ++ +  + + +  +   + W S++ +
Sbjct: 360 LLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGA 392



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 215/475 (45%), Gaps = 57/475 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  +  A  +FD++ +R V +W AM+  Y   G     L  + +M       + FT
Sbjct: 54  LYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFT 113

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ +C      + G +IH  + K  Y++  F+ +SL+ MYAK     +AR +F+ + 
Sbjct: 114 FATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLP 173

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DVV   +IIS Y+  G   EAL LF  +QR G+ +N  T+ + L A    +    G 
Sbjct: 174 ER-DVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGK 232

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  ++      V + N+LI MY++CG +  A  +   +  +  +SWN+ML G+ ++ 
Sbjct: 233 QVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHG 292

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              + ++ F+ ++   + KPD V  +  +S     G    G E+    +  G   +++ G
Sbjct: 293 KGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGG--DEIEAG 350

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
              ++ Y   C ++ +GR                 AG  +     +A EL + +  E   
Sbjct: 351 ---IEHYG--CVIDLLGR-----------------AGRVE-----EAFELIKKMPFEPTA 383

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHG----YIIRKGLSDLVILNAIVDVYGKCGNIDYS 415
           A   I GS+L AC  +   +   E  G     I  +   + VIL+   ++Y   G  +  
Sbjct: 384 A---IWGSLLGACR-VHSNTNIGEFVGCRLLEIEPENAGNYVILS---NLYASAGRWEDV 436

Query: 416 RNVFESIESKDVV-----SWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           RNV E +  K V+     SW  +          ++ +  FY  + ++   + + L
Sbjct: 437 RNVRELMMEKAVIKEPGRSWIEL----------DQTIHTFYASDRSHPRREEVFL 481



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/201 (19%), Positives = 92/201 (45%), Gaps = 6/201 (2%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           +++G+ ++  +I+  +     +++ L+ +Y +C  L  A  VF+ ++ ++++ WT+MI+ 
Sbjct: 26  VREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISG 85

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLD 596
               G    A+ LF +M      P+  TF  +L +C+       G++    I + +Y+  
Sbjct: 86  YSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENH 145

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
            +    + L+D+  +A  + EA      +           + G  ++  ++E  E+  + 
Sbjct: 146 IFVG--SSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRL 203

Query: 657 LLELDPGNPGNYVLISNVFAA 677
             E   G   NYV  +++  A
Sbjct: 204 QRE---GMSSNYVTYASLLTA 221


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 235/656 (35%), Positives = 382/656 (58%), Gaps = 2/656 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IHA  ++   +   Y+ N ++      G    +  V  Q++  +   WN+M+ G V  D
Sbjct: 34  HIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  A+  +  ++G G  P+       + A  R  ++  G ++H+  +K G+  D+ +  
Sbjct: 94  CFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKT 153

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ +Y KC   +   +VF  +  ++ +SWT II GY  +    +A+  F+ +   GL  
Sbjct: 154 SLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D   +  VL AC+ L   +  + I  YI   G+  ++ +  +++D+Y KCGN++ +  +F
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            ++  KD+VSW++MI  Y  NGL  +AL+LF+ M   N++ D  T+V  LSA ++L  L 
Sbjct: 274 SAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD 333

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G   +  + R  F     + ++L+DMY++CG++  A ++F  ++ KD ++W +M+    
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLS 393

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           ++G  K    LF  +E     PD  TF+ LL  C+H G +NEG++F   M+  + L P  
Sbjct: 394 MNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSI 453

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C+VDLLGRA  L EA+Q + +M ++P A VW ALLG C++H +  L E V KKL+E
Sbjct: 454 EHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P N GNYV +SN+++ + +W++ E++R  M+   ++K    SWIEI   +H F+  DK
Sbjct: 514 LEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDK 573

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH  S++IY KL E+  +L +  G+V  T+FVL ++EEEEK   L  HSE+LA+A+G++ 
Sbjct: 574 SHWLSEKIYAKLDELGREL-KAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIA 632

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S    +IR+ KNLRVC DCH   KL+S++  RE+++RD NRFH F  G CSC DYW
Sbjct: 633 SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 258/501 (51%), Gaps = 7/501 (1%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           IH  +L+   D  ++++N ++           ++ +F ++ E  ++ LWN++I    +  
Sbjct: 35  IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEP-NIFLWNTMIRGLVSKD 93

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
              +A+ L+  M+  G + N +T    L+AC       LG++IH+  VK+G +  V+V  
Sbjct: 94  CFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKT 153

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP 259
           +L+++Y +C    +A  V   + +K+ VSW +++TG++ +  + +A+  F++L   G KP
Sbjct: 154 SLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D    V  ++A  RLG+  +G+ +  Y    G   ++ +  +L+DMY KC  +     +F
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
             M  +D +SW+T+I GYA N    +AL+LF  +Q E L  D   +  VL AC+ L  + 
Sbjct: 274 SAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD 333

Query: 380 QTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
                   + R + LS+ V+  A++D+Y KCG++  +  +F +++ KD V W +M+    
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLS 393

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NG A     LF L+ +  +  D  T +  L   +    + +G++     +++ F+L  S
Sbjct: 394 MNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNN-MKRVFSLTPS 452

Query: 499 VA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKM- 554
           +     +VD+  R G L+ A+++ N +  K + ++W +++    LH    +A  +  K+ 
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512

Query: 555 EAESFAPDHITFLALLYACSH 575
           E E +   +   L+ +Y+ +H
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNH 533



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 216/432 (50%), Gaps = 4/432 (0%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           GS   ++ +F +V +  +F WN M+   VS       +  Y  MR  G   + FT P V+
Sbjct: 62  GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KACA   D+  G KIH L++K GYD   F+  SL+++Y KC +F  A ++FD + +K +V
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK-NV 180

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V W +II+ Y +SG   EA+G F+++  +GL  ++++ V  L AC      T G  I   
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRY 240

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
              SG    V+VA +L+ MY +CG +  A  +   +  KD VSW++M+ G+  N L  +A
Sbjct: 241 ISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQA 300

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           +  F ++Q    KPD    V  +SA   LG L  G    +   +  F+S+  +G  L+DM
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDM 360

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
           Y+KC  V     +F  M  +D + W  ++ G + N        LF  V+  G+  D    
Sbjct: 361 YSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
             +L  C+    +++ ++    + R       +     +VD+ G+ G ++ +  +  ++ 
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMP 480

Query: 424 SK-DVVSWTSMI 434
            K + V W +++
Sbjct: 481 MKPNAVVWGALL 492



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 196/390 (50%), Gaps = 17/390 (4%)

Query: 259 PDQVCTVNAVSASGRLGNLLNG----KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV-- 312
           P       A+     L N LN     K +HA  ++     D  + N ++     CC +  
Sbjct: 7   PSSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLIL-----CCALDF 61

Query: 313 ---NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
              NY   VF Q+   +   W T+I G    +C   A+ L+ +++  G   +   I  VL
Sbjct: 62  GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            AC+    +    +IH  +++ G   D+ +  +++ +Y KC N D +  VF+ I  K+VV
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           SWT++I+ Y+ +G   EA+  F  + E  ++ DS +LV  L+A + L     G+ ++ +I
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
              G      VA+SL+DMY +CG L+ AN +F+ +  KD++ W++MI     +G  + A+
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
           DLF++M++E+  PD  T + +L AC+  G ++ G     +M  +  L   P     L+D+
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSN-PVLGTALIDM 360

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
             +   + +A++   +M+ +    VW A++
Sbjct: 361 YSKCGSVTQAWEIFTAMKKKDRV-VWNAMM 389



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 174/362 (48%), Gaps = 10/362 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC +  DA ++FD +  + V +W A++  Y+S+G     +  + ++  +G+  D+F+
Sbjct: 158 LYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFS 217

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA L D   G  I   +   G     F+  SL+ MY KC +  +A  +F  M 
Sbjct: 218 LVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP 277

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK D+V W+++I  Y+ +G   +AL LF +MQ   L  + YT V  L AC  ++   L +
Sbjct: 278 EK-DIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC--ATLGALDL 334

Query: 181 EIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            I A+++           +  ALI MY++CG +T+A  +   ++ KD V WN+M+ G   
Sbjct: 335 GIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSM 394

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--VSDL 296
           N         F  ++  G +PD+   +  +      G +  G++     +K+ F     +
Sbjct: 395 NGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN-NMKRVFSLTPSI 453

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALELFRTVQ 354
           +    ++D+  +   +N   ++   M  + + + W  ++ G     + HL    L + ++
Sbjct: 454 EHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513

Query: 355 LE 356
           LE
Sbjct: 514 LE 515


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 235/656 (35%), Positives = 382/656 (58%), Gaps = 2/656 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IHA  ++   +   Y+ N ++      G    +  V  Q++  +   WN+M+ G V  D
Sbjct: 34  HIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  A+  +  ++G G  P+       + A  R  ++  G ++H+  +K G+  D+ +  
Sbjct: 94  CFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKT 153

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ +Y KC   +   +VF  +  ++ +SWT II GY  +    +A+  F+ +   GL  
Sbjct: 154 SLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D   +  VL AC+ L   +  + I  YI   G+  ++ +  +++D+Y KCGN++ +  +F
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            ++  KD+VSW++MI  Y  NGL  +AL+LF+ M   N++ D  T+V  LSA ++L  L 
Sbjct: 274 SAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD 333

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G   +  + R  F     + ++L+DMY++CG++  A ++F  ++ KD ++W +M+    
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLS 393

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           ++G  K    LF  +E     PD  TF+ LL  C+H G +NEG++F   M+  + L P  
Sbjct: 394 MNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSI 453

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C+VDLLGRA  L EA+Q + +M ++P A VW ALLG C++H +  L E V KKL+E
Sbjct: 454 EHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P N GNYV +SN+++ + +W++ E++R  M+   ++K    SWIEI   +H F+  DK
Sbjct: 514 LEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDK 573

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH  S++IY KL E+  +L +  G+V  T+FVL ++EEEEK   L  HSE+LA+A+G++ 
Sbjct: 574 SHWLSEKIYAKLDELGREL-KAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIA 632

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S    +IR+ KNLRVC DCH   KL+S++  RE+++RD NRFH F  G CSC DYW
Sbjct: 633 SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 258/501 (51%), Gaps = 7/501 (1%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           IH  +L+   D  ++++N ++           ++ +F ++ E  ++ LWN++I    +  
Sbjct: 35  IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEP-NIFLWNTMIRGLVSKD 93

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
              +A+ L+  M+  G + N +T    L+AC       LG++IH+  VK+G +  V+V  
Sbjct: 94  CFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKT 153

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP 259
           +L+++Y +C    +A  V   + +K+ VSW +++TG++ +  + +A+  F++L   G KP
Sbjct: 154 SLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D    V  ++A  RLG+  +G+ +  Y    G   ++ +  +L+DMY KC  +     +F
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
             M  +D +SW+T+I GYA N    +AL+LF  +Q E L  D   +  VL AC+ L  + 
Sbjct: 274 SAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD 333

Query: 380 QTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
                   + R + LS+ V+  A++D+Y KCG++  +  +F +++ KD V W +M+    
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLS 393

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NG A     LF L+ +  +  D  T +  L   +    + +G++     +++ F+L  S
Sbjct: 394 MNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNN-MKRVFSLTPS 452

Query: 499 VA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKM- 554
           +     +VD+  R G L+ A+++ N +  K + ++W +++    LH    +A  +  K+ 
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512

Query: 555 EAESFAPDHITFLALLYACSH 575
           E E +   +   L+ +Y+ +H
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNH 533



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 216/432 (50%), Gaps = 4/432 (0%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           GS   ++ +F +V +  +F WN M+   VS       +  Y  MR  G   + FT P V+
Sbjct: 62  GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KACA   D+  G KIH L++K GYD   F+  SL+++Y KC +F  A ++FD + +K +V
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK-NV 180

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V W +II+ Y +SG   EA+G F+++  +GL  ++++ V  L AC      T G  I   
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRY 240

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
              SG    V+VA +L+ MY +CG +  A  +   +  KD VSW++M+ G+  N L  +A
Sbjct: 241 ISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQA 300

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           +  F ++Q    KPD    V  +SA   LG L  G    +   +  F+S+  +G  L+DM
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDM 360

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
           Y+KC  V     +F  M  +D + W  ++ G + N        LF  V+  G+  D    
Sbjct: 361 YSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
             +L  C+    +++ ++    + R       +     +VD+ G+ G ++ +  +  ++ 
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMP 480

Query: 424 SK-DVVSWTSMI 434
            K + V W +++
Sbjct: 481 MKPNAVVWGALL 492



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 196/390 (50%), Gaps = 17/390 (4%)

Query: 259 PDQVCTVNAVSASGRLGNLLNG----KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV-- 312
           P       A+     L N LN     K +HA  ++     D  + N ++     CC +  
Sbjct: 7   PTSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLIL-----CCALDF 61

Query: 313 ---NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
              NY   VF Q+   +   W T+I G    +C   A+ L+ +++  G   +   I  VL
Sbjct: 62  GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            AC+    +    +IH  +++ G   D+ +  +++ +Y KC N D +  VF+ I  K+VV
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           SWT++I+ Y+ +G   EA+  F  + E  ++ DS +LV  L+A + L     G+ ++ +I
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
              G      VA+SL+DMY +CG L+ AN +F+ +  KD++ W++MI     +G  + A+
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
           DLF++M++E+  PD  T + +L AC+  G ++ G     +M  +  L   P     L+D+
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSN-PVLGTALIDM 360

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
             +   + +A++   +M+ +    VW A++
Sbjct: 361 YSKCGSVTQAWEIFTAMKRKDRV-VWNAMM 389



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 174/362 (48%), Gaps = 10/362 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC +  DA ++FD +  + V +W A++  Y+S+G     +  + ++  +G+  D+F+
Sbjct: 158 LYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFS 217

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA L D   G  I   +   G     F+  SL+ MY KC +  +A  +F  M 
Sbjct: 218 LVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP 277

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK D+V W+++I  Y+ +G   +AL LF +MQ   L  + YT V  L AC  ++   L +
Sbjct: 278 EK-DIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC--ATLGALDL 334

Query: 181 EIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            I A+++           +  ALI MY++CG +T+A  +   ++ KD V WN+M+ G   
Sbjct: 335 GIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSM 394

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--VSDL 296
           N         F  ++  G +PD+   +  +      G +  G++     +K+ F     +
Sbjct: 395 NGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN-NMKRVFSLTPSI 453

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALELFRTVQ 354
           +    ++D+  +   +N   ++   M  + + + W  ++ G     + HL    L + ++
Sbjct: 454 EHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513

Query: 355 LE 356
           LE
Sbjct: 514 LE 515


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 274/852 (32%), Positives = 461/852 (54%), Gaps = 21/852 (2%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MYGKCG +  A++LFD + +R V +W  ++  +  NG           M V GI  D   
Sbjct: 274  MYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVL 333

Query: 61   FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
               ++  C+    LD  + + H  ++  G D    +  +L++M+A+C    KAR++F+++
Sbjct: 334  LLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKV 393

Query: 120  GEKEDVVL--WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
             +    V+  WN++I+AY+  G   EAL L   +Q  G+  N  TF+++L AC  SS + 
Sbjct: 394  ADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGAC--SSLQD 451

Query: 178  LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
             G  +H    +SG + +V VANAL+ MY +CG + ++A +  ++  KD  SWNS +    
Sbjct: 452  -GRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHS 510

Query: 238  QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
             +    + ++   +++G G   ++V  + A+++     +L +G  +H   ++ G+ +D  
Sbjct: 511  YHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTV 570

Query: 298  IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
            + + +++MY +C  ++    +F ++   D I WT ++  Y Q     + +E FR++  EG
Sbjct: 571  VASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEG 630

Query: 358  LDADVMIIGSVL--MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
            L    + + +++  +A SGL+       I       GL S+ ++ N++++++ +  ++  
Sbjct: 631  LKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRSLSQ 690

Query: 415  SRNVFESIESKDVVSWTSMISSYVHNGLANEA-LELFYLMNEANVESDSITLVSALSAAS 473
            +R +F+    K V   T+M+++YV      EA L LF  M    +E  S+TLV+A+SA  
Sbjct: 691  ARAIFDRNPEKSVALHTTMLAAYVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMSACG 750

Query: 474  SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
             L+     K ++      G   E  VA+ LVDMY + G +D A  +F+    +++  W +
Sbjct: 751  GLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNA 810

Query: 534  MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
            M  A    G  +  + L   M+ + + PD +TF++LL  C HSGL+ E +     MR ++
Sbjct: 811  MAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREF 870

Query: 594  QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA--EVWCALLGACR-------VH 644
             +DP P+HY+C++DLL RA  L++A  F+  + +   A   +W ALLGACR         
Sbjct: 871  GIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGNSSSRA 930

Query: 645  SNKELGEIVAKKLLELDPGNP-GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
                   +  +K+      +P   +V ++N+ AAS  W +   +R  M   GL+K PG S
Sbjct: 931  RRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLRKEPGRS 990

Query: 704  WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
             I + N++H F+A D+ H   +EIY +L  + E+   + GYV  T  V HNV E +K  +
Sbjct: 991  LIAVKNRLHEFVAGDRDHPRREEIYAELRRL-ERAMVDRGYVVDTGMVTHNVGEADKRDL 1049

Query: 764  LYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHH 823
            L  HSE+LA+A+GVL +  GS +RI KNLR C DCH+  KL+S + GRE+VVRD+NRFHH
Sbjct: 1050 LGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHH 1109

Query: 824  FEAGVCSCGDYW 835
            F  G CSCGDYW
Sbjct: 1110 FRNGSCSCGDYW 1121



 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 173/590 (29%), Positives = 301/590 (51%), Gaps = 16/590 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG   +A++ FD ++ + +F+W ++L AY   G   + LE + +M   G+  D   
Sbjct: 65  MYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLV 124

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-------FIVNSLVAMYAKCYDFRKAR 113
           +  ++K C  L DL  G ++H  + + G    D       F+ N LV MY KC    +A+
Sbjct: 125 YARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQ 184

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           + FD +  K ++  W SI+ AY  +G   +AL  F +M + G+  +   F+AAL  C   
Sbjct: 185 RAFDSIAHK-NIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 243

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                G  IH        +  + + NAL++MY +CG++  A  +   LE ++ +SW  ++
Sbjct: 244 KRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILV 303

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-HAYAIKQGF 292
           + F +N    +     R +   G KPD+V  +  ++     G L     + H Y +  G 
Sbjct: 304 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGL 363

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQM---TAQDFISWTTIIAGYAQNNCHLKALEL 349
             +  +   L+ M+A+C  V+    +F ++   +AQ    W  +I  YA   C  +AL L
Sbjct: 364 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 423

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGK 408
             ++QL+G+  + +   S L ACS L+     + +H  I   G    V + NA+V +YGK
Sbjct: 424 LDSLQLQGVKPNCITFISSLGACSSLQ---DGRALHLLIHESGFDQEVSVANALVTMYGK 480

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           CG++  S  +F  +  KD+ SW S I+++ ++G ++E ++L   M       + +T ++A
Sbjct: 481 CGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTA 540

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           L++ +  + L+ G  ++  I++ G+  +  VAS++++MY RCG LD A ++F  V+T D+
Sbjct: 541 LNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDV 600

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           ILWT M+      GR K  ++ F  M  E   P  +T + L+   + SGL
Sbjct: 601 ILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGL 650



 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 181/621 (29%), Positives = 320/621 (51%), Gaps = 30/621 (4%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-------FIVNSLVAMYAK 105
           G+     ++  ++K C  L DL  G ++H  + + G    D       F+ N LV MY K
Sbjct: 9   GVDDACRSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGK 68

Query: 106 CYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVA 165
           C    +A++ FD +  K ++  W SI+ AY  +G   +AL  F +M + G+  +   +  
Sbjct: 69  CGRTDEAQRAFDSIAHK-NIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYAR 127

Query: 166 ALQACEDSSFETLGMEIHAATVKSG-------QNLQVYVANALIAMYARCGKMTEAAGVL 218
            L+ C        G  +HA   +SG       ++   ++ N L+ MY +CG+  EA    
Sbjct: 128 LLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAF 187

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
             + +K+  SW S+L  +    L+ +A++ F ++  AG +PD++  + A++  G L  L 
Sbjct: 188 DSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLE 247

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           +G  +H     +   SDL+IGN L+ MY KC  ++    +F  +  ++ ISWT +++ +A
Sbjct: 248 DGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFA 307

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI-HGYIIRKGLS-DL 396
           +N    +   L R++ +EG+  D +++ ++L  CS    + +   + H YI+  GL  + 
Sbjct: 308 ENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREA 367

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESI--ESKDVVS-WTSMISSYVHNGLANEALELFYLM 453
           V+  A++ ++ +CG +D +R +FE +   S  V+  W +MI++Y H G + EAL L   +
Sbjct: 368 VVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSL 427

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
               V+ + IT +S+L A SS   L+ G+ L+  I   GF+ E SVA++LV MY +CG+L
Sbjct: 428 QLQGVKPNCITFISSLGACSS---LQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSL 484

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
             + K+F+ +  KDL  W S I A+  HGR    I L  +M  E F  + +TFL  L +C
Sbjct: 485 LDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSC 544

Query: 574 SHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ-FVRSMQIEPTA 631
           +    + +G    E I++C Y+ D      + ++++ GR   L+ A + F R    +   
Sbjct: 545 TDPASLQDGVLMHEKIVQCGYEADTVVA--SAVINMYGRCGGLDRAREIFTRVKTFDVI- 601

Query: 632 EVWCALLGA-CRVHSNKELGE 651
            +W  +L   C++   K++ E
Sbjct: 602 -LWTGMLTVYCQLGRTKQVME 621



 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 181/651 (27%), Positives = 326/651 (50%), Gaps = 16/651 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG   +A++ FD ++ + +F+W ++L AY   G   + LE + +M   G+  D   
Sbjct: 173 MYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLV 232

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +  C +LK L+ GA IH  +     DS   I N+LV+MY KC     A++LFD + 
Sbjct: 233 FLAALNVCGILKRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCL- 291

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS-FETLG 179
           E+ +V+ W  ++S ++ +G+  E  GL R M   G+  +    +  L  C      +   
Sbjct: 292 ERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDS 351

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV---SWNSMLTGF 236
              H   V  G + +  VA AL++M+ARCG++ +A  +  ++ +  +     WN+M+T +
Sbjct: 352 WMAHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAY 411

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
                  +A+     LQ  G KP+    +  +S+ G   +L +G+ LH    + GF  ++
Sbjct: 412 AHRGCSKEALFLLDSLQLQGVKPN---CITFISSLGACSSLQDGRALHLLIHESGFDQEV 468

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N L+ MY KC  +    ++F +M  +D  SW + IA ++ +    + ++L   ++ E
Sbjct: 469 SVANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGE 528

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
           G   + +   + L +C+    +     +H  I++ G  +D V+ +A++++YG+CG +D +
Sbjct: 529 GFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRA 588

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS--AAS 473
           R +F  +++ DV+ WT M++ Y   G   + +E F  M    ++   +TLV+ ++  A S
Sbjct: 589 REIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADS 648

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            L   + G  ++      G   E  VA+SL++M++   +L  A  +F+    K + L T+
Sbjct: 649 GLEHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTT 708

Query: 534 MINANGLHGRGK-VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           M+ A     RGK  A+ LF +M  E   P  +T +  + AC      +  K+  E  R +
Sbjct: 709 MLAAYVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERAR-E 767

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEA-YQFVRSMQIEPTAEVWCALLGACR 642
             L+        LVD+ G+A  ++ A Y F R+++   T   W A+ GA R
Sbjct: 768 LGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVT--TWNAMAGAYR 816



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 227/479 (47%), Gaps = 24/479 (5%)

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQ-------IGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           GRLG+L  GK LHA   + G + D +       +GN L+ MY KC   +   R F  +  
Sbjct: 25  GRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAH 84

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           ++  SWT+I+  Y     H +ALE F  +   G++ D ++   +L  C  L  ++Q K +
Sbjct: 85  KNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGDLAQGKRL 144

Query: 385 HGYIIRKGL--------SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           H  I   GL            + N +V +YGKCG  D ++  F+SI  K++ SWTS++ +
Sbjct: 145 HAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVA 204

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           Y H GL  +ALE F+ M +A VE D +  ++AL+    L  L+ G  ++  I  K  + +
Sbjct: 205 YFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKPLDSD 264

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             + ++LV MY +CG LD+A ++F+C++ +++I WT +++    +GR +    L   M  
Sbjct: 265 LEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAV 324

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
           E   PD +  L LL  CS  G+++E             LD        L+ +  R   ++
Sbjct: 325 EGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVD 384

Query: 617 EAYQFVRSMQIEPTA--EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNV 674
           +A +    +        E W A++ A   H       +     L+L    P     IS++
Sbjct: 385 KAREIFEKVADHSAQVIECWNAMITA-YAHRGCSKEALFLLDSLQLQGVKPNCITFISSL 443

Query: 675 FAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
            A S   +D   + + +  SG  +      + + N + +   +  S  +S +++ ++AE
Sbjct: 444 GACS-SLQDGRALHLLIHESGFDQE-----VSVANALVTMYGKCGSLLDSAKLFSEMAE 496


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 242/625 (38%), Positives = 383/625 (61%), Gaps = 11/625 (1%)

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           ++  D  SWNS++    ++    +A+  F  ++     P +     A+ A   L ++ +G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K+ H  A   G+ SD+ + + L+ MY+ C  +    +VF ++  ++ +SWT++I GY  N
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155

Query: 341 NCHLKALELFRTVQL-EGLDADVMIIGS-----VLMACSGLKCMSQTKEIHGYIIRKGLS 394
              L A+ LF+ + + E  D D M + S     V+ ACS +     T+ IH ++I++G  
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215

Query: 395 DLV-ILNAIVDVYGKCGN--IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
             V + N ++D Y K G   +  +R +F+ I  KD VS+ S++S Y  +G++NEA E+F 
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275

Query: 452 -LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
            L+    V  ++ITL + L A S    L+ GK ++  +IR G   +  V +S++DMY +C
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G ++ A K F+ ++ K++  WT+MI   G+HG    A++LF  M      P++ITF+++L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            ACSH+GL  EG ++   M+  + ++P  EHY C+VDLLGRA  L++AY  ++ M+++P 
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455

Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
           + +W +LL ACR+H N EL EI   +L ELD  N G Y+L+S+++A + +WKDVE+VRM 
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
           M+  GL K PG S +E+  ++H F+  D+ H + ++IY+ LAE+  KL  E GYV+ T  
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL-LEAGYVSNTSS 574

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
           V H+V+EEEK   L  HSE+LAIA+G++ +  GS + + KNLRVC DCH+  KL+S++  
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVD 634

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           RE VVRDA RFHHF+ G CSCGDYW
Sbjct: 635 REFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 150/472 (31%), Positives = 253/472 (53%), Gaps = 15/472 (3%)

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           LF+R  +K DV  WNS+I+  + SG   EAL  F  M+++ L     +F  A++AC  S 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS-SL 89

Query: 175 FETL-GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
           F+   G + H      G    ++V++ALI MY+ CGK+ +A  V  ++  ++ VSW SM+
Sbjct: 90  FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149

Query: 234 TGFVQNDLYCKAMQFFREL------QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
            G+  N     A+  F++L             D +  V+ +SA  R+      + +H++ 
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209

Query: 288 IKQGFVSDLQIGNTLMDMYAKC--CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
           IK+GF   + +GNTL+D YAK     V    ++F Q+  +D +S+ +I++ YAQ+    +
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 346 ALELFRT-VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIV 403
           A E+FR  V+ + +  + + + +VL+A S    +   K IH  +IR GL D VI+  +I+
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D+Y KCG ++ +R  F+ +++K+V SWT+MI+ Y  +G A +ALELF  M ++ V  + I
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389

Query: 464 TLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
           T VS L+A S   +  +G +  N    R G          +VD+  R G L  A  +   
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449

Query: 523 VQTK-DLILWTSMINANGLHGRGKVA-IDLFYKMEAESFAPDHITFLALLYA 572
           ++ K D I+W+S++ A  +H   ++A I +    E +S    +   L+ +YA
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA 501



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 228/446 (51%), Gaps = 34/446 (7%)

Query: 14  LFDKVSQRT-VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           LF++   +T VF+WN+++     +G+    L  +S MR L +     +FPC IKAC+ L 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D+  G + H      GY S  F+ ++L+ MY+ C     AR++FD +  K ++V W S+I
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI-PKRNIVSWTSMI 149

Query: 133 SAYSASGQCLEALGLFREM------QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
             Y  +G  L+A+ LF+++          +  ++   V+ + AC     + L   IH+  
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209

Query: 187 VKSGQNLQVYVANALIAMYARCGK--MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
           +K G +  V V N L+  YA+ G+  +  A  +  Q+ +KD VS+NS+++ + Q+ +  +
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRL------GNLLNGKELHAYAIKQGFVSDLQI 298
           A + FR L       ++V T NA++ S  L      G L  GK +H   I+ G   D+ +
Sbjct: 270 AFEVFRRLV-----KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G +++DMY KC  V    + F +M  ++  SWT +IAGY  +    KALELF  +   G+
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             + +   SVL ACS       G +  +  K   G  +  GL        +VD+ G+ G 
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG--VEPGLEH---YGCMVDLLGRAGF 439

Query: 412 IDYSRNVFESIESK-DVVSWTSMISS 436
           +  + ++ + ++ K D + W+S++++
Sbjct: 440 LQKAYDLIQRMKMKPDSIIWSSLLAA 465



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 205/422 (48%), Gaps = 18/422 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV------LGI 54
           MY  CG + DA ++FD++ +R + +W +M+  Y  NG  L  +  +  + V        +
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD--FRKA 112
            +D+     VI AC+ +        IH  V+K G+D    + N+L+  YAK  +     A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACE 171
           R++FD++ +K D V +NSI+S Y+ SG   EA  +FR + +  +VT NA T    L A  
Sbjct: 240 RKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            S    +G  IH   ++ G    V V  ++I MY +CG++  A     +++NK+  SW +
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQ 290
           M+ G+  +    KA++ F  +  +G +P+ +  V+ ++A    G  + G +  +A   + 
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRF 418

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALE 348
           G    L+    ++D+  +   +     +  +M  + D I W++++A      N  L  + 
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEIS 478

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSG-LKCMSQTKEI---HGYIIRKGLSDLVILNAIVD 404
           + R  +L+  +    ++ S + A +G  K + + + I    G +   G S L+ LN  V 
Sbjct: 479 VARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFS-LLELNGEVH 537

Query: 405 VY 406
           V+
Sbjct: 538 VF 539


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 267/809 (33%), Positives = 418/809 (51%), Gaps = 77/809 (9%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEK-EDVVLWNSIISAYSASG---QCLEALGLF- 148
           F  N+++           A +LFD M  + +D V W ++IS YS +G   +  E   L  
Sbjct: 75  FTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMI 134

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
           R+    G   + ++F + ++AC       L +++HA   K G  ++  + N+++ MY +C
Sbjct: 135 RDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKC 194

Query: 209 GKMTEAAGVLYQLEN-------------------------------KDSVSWNSMLTGFV 237
           G +  A  V + +E                                +D VSWN++++ F 
Sbjct: 195 GDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFS 254

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q+    + +  F E+   G  P+ +   + +SA     +L  G  LHA  ++     DL 
Sbjct: 255 QHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLV 314

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
            GN L+DMYAKC C++   RVF  +   D ISW ++I G         AL LF  ++   
Sbjct: 315 FGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSS 374

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS- 415
           +  D  I+ ++L  CSG    S  + +HGY I+ G+ S   + NAI+ +Y KCG+ D + 
Sbjct: 375 VVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKAD 434

Query: 416 ------------------------------RNVFESIESKDVVSWTSMISSYVHNGLANE 445
                                         R  F+ +  +++V+W SM+S+YV NG + E
Sbjct: 435 LVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEE 494

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
            L+L+  M    V+ D IT  +++ A + L+I+K G ++     + G +L  SVA+S+V 
Sbjct: 495 GLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVT 554

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY+RCG +  A   F+ +  KDLI W +M+ A   +G G   ID F  M      P+HI+
Sbjct: 555 MYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHIS 614

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           ++++L  CSH GL+ EGK + + M   + + P  EH++C+VDLLGRA  LE+A   +  M
Sbjct: 615 YVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGM 674

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
             +P A VW ALLG+CRVH +  L E  AKKL+ELD      YVL+SN+++ S +  +V 
Sbjct: 675 PFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVA 734

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
            +R  M+  G++ + G SWIE+ N++H F   + SH +  E+Y KL E+ + +E  G Y+
Sbjct: 735 DMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYI 794

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
                V  +V   +K      HSE+LA A+G+L       I + KNLRVC DCH   KL+
Sbjct: 795 T----VESSVHRSKKY-----HSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLL 845

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           S +  REL++RD  RFHHF+ G+CSC DY
Sbjct: 846 SLVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 178/649 (27%), Positives = 292/649 (44%), Gaps = 103/649 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLRV------- 42
           MY  CG   DA Q+F +   R +FTWN M+ A VS+             P+RV       
Sbjct: 52  MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWT 111

Query: 43  ---------------LETYSRM----RVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGL 83
                           ET+S M       G + D F+F  V+KAC  L D     ++H L
Sbjct: 112 TMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHAL 171

Query: 84  VLKCGYDSTDFIVNSLVAMYAKC-------------------------------YDFRKA 112
           V K G+     I NS+V MY KC                               Y   KA
Sbjct: 172 VSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKA 231

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
            Q+F+RM E+++V  WN++IS +S  G  ++ L +F EM   G   N  T+ + L AC  
Sbjct: 232 LQIFNRMPERDEVS-WNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAS 290

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
           +S    G  +HA  ++   +L +   N LI MYA+CG +  A  V   L   D +SWNS+
Sbjct: 291 TSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSL 350

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           +TG V   L   A+  F +++ +    D+      +           G+ LH Y IK G 
Sbjct: 351 ITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGM 410

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG---------------- 336
            S   +GN ++ MYAKC   +    VF  M  ++ ISWT +I                  
Sbjct: 411 GSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDM 470

Query: 337 ---------------YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
                          Y QN    + L+L+ +++  G+  D +   + + AC+ L  +   
Sbjct: 471 MPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLG 530

Query: 382 KEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
            ++  +  + GLS ++ + N+IV +Y +CG I  ++N F+SI+ KD++SW +M++++  N
Sbjct: 531 MQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQN 590

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSV 499
           GL  + ++ F  M +   + + I+ VS LS  S + ++ +GK     + R  G +     
Sbjct: 591 GLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEH 650

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA 547
            S +VD+  R G L+ A  +   +  K +  +W++++ +  +H   ++A
Sbjct: 651 FSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLA 699



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 219/490 (44%), Gaps = 73/490 (14%)

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN-------------- 223
           +  ++HA  + SG +  +++ N L+ MY+ CG   +A  V  +  +              
Sbjct: 26  IARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALV 85

Query: 224 -------------------KDSVSWNSMLTGFVQNDLYCKAMQFF----RELQGAGQKPD 260
                              KDSVSW +M++G+ QN  + ++ + F    R+    G+  D
Sbjct: 86  SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
                + + A G LG+     +LHA   K GF  +  I N+++ MY KC  V+    VF+
Sbjct: 146 PFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFF 205

Query: 321 -------------------------------QMTAQDFISWTTIIAGYAQNNCHLKALEL 349
                                          +M  +D +SW T+I+ ++Q+   ++ L +
Sbjct: 206 DIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAM 265

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGK 408
           F  +  +G   + M  GSVL AC+    +     +H  I+R   S DLV  N ++D+Y K
Sbjct: 266 FVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAK 325

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           CG +D ++ VF+S+   D +SW S+I+  VH GL  +AL LF  M  ++V  D   L + 
Sbjct: 326 CGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTI 385

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           L   S       G+ L+G+ I+ G      V ++++ MYA+CG  D A+ VF  +  ++ 
Sbjct: 386 LGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNT 445

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
           I WT+MI A    G    A   F  M   +     +T+ ++L     +G   EG K    
Sbjct: 446 ISWTAMITAFSRSGDIGKARGYFDMMPERNI----VTWNSMLSTYVQNGFSEEGLKLYVS 501

Query: 589 MRCDYQLDPW 598
           MR +     W
Sbjct: 502 MRSNGVQPDW 511


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/692 (37%), Positives = 394/692 (56%), Gaps = 38/692 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           ++HA  +++G       A  L    A      +  A  V  Q+   +  +WN+++  F  
Sbjct: 48  QLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFAS 107

Query: 239 NDLYCKAMQFFRELQGAGQK-PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           +    + +  F ++    Q+ P+       + A+  + +LL G+ +H   +K  F SDL 
Sbjct: 108 SPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLF 167

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           I N+L+  Y+    ++    VF ++  +D +SW ++I+G+ Q     +AL+LF+ +++E 
Sbjct: 168 ISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMEN 227

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
              + + +  VL AC+    +   +    YI R G+  +L++ NA++D+Y KCG+++ +R
Sbjct: 228 ARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDAR 287

Query: 417 NVFESIESKDVVSWTSMI-------------------------------SSYVHNGLANE 445
            +F+ +E KD+VSWT+MI                               SSY  NG   E
Sbjct: 288 RLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKE 347

Query: 446 ALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           AL +F  L    N + + +TL S L+A + L  +  G  ++ +I ++G  L   + +SL+
Sbjct: 348 ALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLI 407

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMY++CG L+ A +VF  V+ +D+ +W++MI    +HG G+ AIDLF KM+     P+ +
Sbjct: 408 DMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAV 467

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF  LL ACSHSGL++EG+ F   MR  Y + P  +HYAC+VD+LGRA  LEEA + +  
Sbjct: 468 TFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEK 527

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M I P+A VW ALLGACR++ N EL E+   +LLE D  N G YVL+SN++A + KW  V
Sbjct: 528 MPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCV 587

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            ++R  M+ SGL+K PG S IE+   IH F+  D SH  S EIY KL EI  ++ +  GY
Sbjct: 588 SRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARI-KSTGY 646

Query: 745 VAQTQFVLHNVEEE-EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
           V+    +L  VEEE  K   L  HSE+LAIAYG+++      IRI KNLRVC DCHS  K
Sbjct: 647 VSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAK 706

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L+S+L+ R++++RD  RFHHF  G CSC DYW
Sbjct: 707 LISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 269/560 (48%), Gaps = 60/560 (10%)

Query: 37  GEPLRVLETYSRMRVLGIS----VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDST 92
           G PL  +   S   +L  +     +  T P +I  CA  K L    ++H  +L+ G    
Sbjct: 5   GNPLASVPISSNPTILTANNEQKSNPSTVPILIDKCANKKHLK---QLHAHMLRTGLF-- 59

Query: 93  DFIVNSLVAMYAKC-----YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGL 147
            F   S   ++  C          A ++FD++  + ++  WN++I A+++S + ++ L +
Sbjct: 60  -FDPPSATKLFTACALSSPSSLDYACKVFDQI-PRPNLYTWNTLIRAFASSPKPIQGLLV 117

Query: 148 FREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           F +M        N+YTF   ++A  + S    G  IH   +K+     ++++N+LI  Y+
Sbjct: 118 FIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYS 177

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
             G +  A  V  ++  KD VSWNSM++GFVQ     +A+Q F+ ++    +P++V  V 
Sbjct: 178 SLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVG 237

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            +SA  +  +L  G+    Y  + G   +L + N ++DMY KC  +    R+F +M  +D
Sbjct: 238 VLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKD 297

Query: 327 FISWTTIIAGYA-------------------------------QNNCHLKALELFRTVQL 355
            +SWTT+I GYA                               QN    +AL +FR +QL
Sbjct: 298 IVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQL 357

Query: 356 -EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNID 413
            +    + + + S L AC+ L  M     IH YI ++G+  +  I  +++D+Y KCG+++
Sbjct: 358 NKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLE 417

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  VF S+E +DV  W++MI+    +G    A++LF  M E  V+ +++T  + L A S
Sbjct: 418 KALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACS 477

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASS-----LVDMYARCGALDIANKVFNCVQ-TKD 527
              ++ +G+        +   + G V  S     +VD+  R G L+ A ++   +     
Sbjct: 478 HSGLVDEGR----LFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPS 533

Query: 528 LILWTSMINANGLHGRGKVA 547
             +W +++ A  ++G  ++A
Sbjct: 534 ASVWGALLGACRIYGNVELA 553



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 221/461 (47%), Gaps = 49/461 (10%)

Query: 13  QLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFTFPCVIKACAML 71
           ++FD++ +  ++TWN ++ A+ S+ +P++ L  + +M        +++TFP VIKA   +
Sbjct: 85  KVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEV 144

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
             L  G  IHG+V+K  + S  FI NSL+  Y+   D   A  +F ++ EK D+V WNS+
Sbjct: 145 SSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEK-DIVSWNSM 203

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           IS +   G   EAL LF+ M+      N  T V  L AC        G        ++G 
Sbjct: 204 ISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGI 263

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV-------------- 237
           ++ + ++NA++ MY +CG + +A  +  ++E KD VSW +M+ G+               
Sbjct: 264 DINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDV 323

Query: 238 -----------------QNDLYCKAMQFFRELQ-GAGQKPDQVCTVNAVSASGRLGNLLN 279
                            QN    +A+  FRELQ     KP++V   + ++A  +LG +  
Sbjct: 324 MPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDL 383

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G  +H Y  KQG   +  I  +L+DMY+KC  +     VFY +  +D   W+ +IAG A 
Sbjct: 384 GGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAM 443

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKG 392
           +     A++LF  +Q   +  + +   ++L ACS       G    +Q + ++G +   G
Sbjct: 444 HGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVV--PG 501

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
                 +   VD+ G+ G ++      E IE   +V   S+
Sbjct: 502 SKHYACM---VDILGRAGCLE---EAVELIEKMPIVPSASV 536



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 142/311 (45%), Gaps = 31/311 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A  +F K+ ++ + +WN+M+  +V  G P   L+ + RM++     +  T 
Sbjct: 176 YSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTM 235

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA   DL+ G      + + G D    + N+++ MY KC     AR+LFD+M E
Sbjct: 236 VGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEE 295

Query: 122 K------------------------------EDVVLWNSIISAYSASGQCLEALGLFREM 151
           K                              ED+  WN++IS+Y  +G+  EAL +FRE+
Sbjct: 296 KDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFREL 355

Query: 152 Q-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           Q       N  T  + L AC       LG  IH    K G  L  ++  +LI MY++CG 
Sbjct: 356 QLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGH 415

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           + +A  V Y +E +D   W++M+ G   +     A+  F ++Q    KP+ V   N + A
Sbjct: 416 LEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCA 475

Query: 271 SGRLGNLLNGK 281
               G +  G+
Sbjct: 476 CSHSGLVDEGR 486



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 197/409 (48%), Gaps = 52/409 (12%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYA--KCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           K+LHA+ ++ G   D      L    A      ++Y  +VF Q+   +  +W T+I  +A
Sbjct: 47  KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFA 106

Query: 339 QNNCHLKALELFRTVQLEGLD-ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
            +   ++ L +F  +  E     +      V+ A + +  +   + IHG +++    SDL
Sbjct: 107 SSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDL 166

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            I N+++  Y   G++D +  VF  I  KD+VSW SMIS +V  G   EAL+LF  M   
Sbjct: 167 FISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKME 226

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           N   + +T+V  LSA +    L+ G+    +I R G ++   ++++++DMY +CG+L+ A
Sbjct: 227 NARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDA 286

Query: 517 NKVFNCVQTKDLILWTSMINA-------------------------NGL------HGRGK 545
            ++F+ ++ KD++ WT+MI+                          N L      +G+ K
Sbjct: 287 RRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPK 346

Query: 546 VAIDLFYKMEA-ESFAPDHITFLALLYACSHSGLINEG-------KKFLEIMRCDYQLDP 597
            A+ +F +++  ++  P+ +T  + L AC+  G ++ G       KK  + ++ ++ +  
Sbjct: 347 EALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKK--QGIKLNFHIT- 403

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
                  L+D+  +  HLE+A +   S++      VW A++    +H +
Sbjct: 404 -----TSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSAMIAGLAMHGH 446



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 33/205 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFT-------------------------------WNAM 29
           MY KCGS+ DA +LFDK+ ++ + +                               WNA+
Sbjct: 276 MYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNAL 335

Query: 30  LGAYVSNGEPLRVLETYSRMRV-LGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
           + +Y  NG+P   L  +  +++      +  T    + ACA L  +D G  IH  + K G
Sbjct: 336 ISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQG 395

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
                 I  SL+ MY+KC    KA ++F  + E+ DV +W+++I+  +  G    A+ LF
Sbjct: 396 IKLNFHITTSLIDMYSKCGHLEKALEVFYSV-ERRDVFVWSAMIAGLAMHGHGRAAIDLF 454

Query: 149 REMQRVGLVTNAYTFVAALQACEDS 173
            +MQ   +  NA TF   L AC  S
Sbjct: 455 SKMQETKVKPNAVTFTNLLCACSHS 479



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 112/207 (54%), Gaps = 10/207 (4%)

Query: 376 KCMSQT--KEIHGYIIRKGLSDLVILNAIVDVYGKCG-----NIDYSRNVFESIESKDVV 428
           KC ++   K++H +++R GL       +   ++  C      ++DY+  VF+ I   ++ 
Sbjct: 39  KCANKKHLKQLHAHMLRTGL--FFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLY 96

Query: 429 SWTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           +W ++I ++  +    + L +F  +++E+    +S T    + AA+ +S L  G+ ++G 
Sbjct: 97  TWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGM 156

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
           +++  F  +  +++SL+  Y+  G LD A  VF+ +  KD++ W SMI+     G  + A
Sbjct: 157 VMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEA 216

Query: 548 IDLFYKMEAESFAPDHITFLALLYACS 574
           + LF +M+ E+  P+ +T + +L AC+
Sbjct: 217 LQLFKRMKMENARPNRVTMVGVLSACA 243


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/675 (35%), Positives = 385/675 (57%), Gaps = 35/675 (5%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           ++  NAL++  A    + +   +   +  +D+VS+N+++ GF     + +A++ +  L  
Sbjct: 72  LFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLR 131

Query: 255 AGQ--KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK---- 308
           AG   +P ++     V A+  LG+   G++ H   ++ GF  +  +G+ L+ MYAK    
Sbjct: 132 AGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLI 191

Query: 309 ---------------------------CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
                                      C  V    R+F  MT +D I+WTT++ G+ QN 
Sbjct: 192 GDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNG 251

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-N 400
              +AL  FR ++ +G+  D    GS+L AC  L  + Q K+IH YIIR    D V + +
Sbjct: 252 LESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGS 311

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A+VD+Y KC +I  +   F  +  K+++SWT++I  Y  NG + EA+ +F  M    ++ 
Sbjct: 312 ALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDP 371

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D  TL S +S+ ++L+ L++G + +   +  G     +V+++LV +Y +CG+++ A+++F
Sbjct: 372 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
           + +   D + WT+++      GR K  IDLF KM A+   PD +TF+ +L ACS +G + 
Sbjct: 432 DEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVE 491

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           +G  +   M+ D+ + P  +HY C++DL  R+  L+EA +F++ M + P A  W  LL A
Sbjct: 492 KGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551

Query: 641 CRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTP 700
           CR+  + E+G+  A+ LLE+DP NP +YVL+ ++ A    W  V Q+R  MR   +KK P
Sbjct: 552 CRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEP 611

Query: 701 GSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEK 760
           G SWI+  NK+H F A D+SH  S  IY+KL  +  K+  E GY      VLH+V + +K
Sbjct: 612 GCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEE-GYKPDVSSVLHDVADTDK 670

Query: 761 VQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANR 820
           V M+  HSE+LAIA+G++       IRI KNLRVCVDCH+  KL+S++ GR+++VRDA R
Sbjct: 671 VHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVR 730

Query: 821 FHHFEAGVCSCGDYW 835
           FH F  GVCSCGD+W
Sbjct: 731 FHKFSNGVCSCGDFW 745



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 217/468 (46%), Gaps = 47/468 (10%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA--FTFPCVIKA 67
           D + LF  ++QR   ++NA++  +   G   R +  Y  +   G SV     T   ++ A
Sbjct: 90  DMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMA 149

Query: 68  CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK---------------------- 105
            + L D   G + H  +L+ G+    F+ + LV MYAK                      
Sbjct: 150 ASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMY 209

Query: 106 ---------CYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
                    C    +AR+LF+ M ++ D + W ++++ ++ +G   +AL  FR M+  G+
Sbjct: 210 NTMITGLLRCKMVEEARRLFEVMTDR-DCITWTTMVTGFTQNGLESQALNFFRRMRFQGI 268

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YTF + L AC   S    G +IHA  +++  +  V+V +AL+ MY++C  +  A  
Sbjct: 269 AIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAET 328

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
              ++  K+ +SW +++ G+ QN    +A++ F E+Q  G  PD     + +S+   L +
Sbjct: 329 AFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLAS 388

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G + H  A+  G +  + + N L+ +Y KC  +    R+F +M   D +SWT ++ G
Sbjct: 389 LEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTG 448

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYII 389
           YAQ     + ++LF  +  + +  D +    VL ACS       G       ++ HG + 
Sbjct: 449 YAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIV- 507

Query: 390 RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
              + D      ++D+Y + G +  +    + +    D + W +++S+
Sbjct: 508 --PIDDH--YTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 194/397 (48%), Gaps = 15/397 (3%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           +C  V +A +LF+ ++ R   TW  M+  +  NG   + L  + RMR  GI++D +TF  
Sbjct: 218 RCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGS 277

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++ AC  L  L+ G +IH  +++  YD   F+ ++LV MY+KC   + A   F RM  K 
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCK- 336

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +++ W ++I  Y  +G   EA+ +F EMQR G+  + +T  + + +C + +    G + H
Sbjct: 337 NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFH 396

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              + SG    + V+NAL+ +Y +CG + +A  +  ++   D VSW +++TG+ Q     
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAK 456

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDLQIGNTL 302
           + +  F ++     KPD V  +  +SA  R G +  G    H+     G V        +
Sbjct: 457 ETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCM 516

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKA-LELFRTVQLEGLDA 360
           +D+Y++   +        QM    D I W T+++      C L+  +E+ +      L+ 
Sbjct: 517 IDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA-----CRLRGDMEIGQWAAENLLEI 571

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYI--IRKGLSD 395
           D     S ++ CS    M  TK     +  +R+G+ D
Sbjct: 572 DPQNPASYVLLCS----MHATKGNWNQVAQLRRGMRD 604



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 116/237 (48%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC S+  AE  F ++S + + +W A++  Y  NG     +  +S M+  GI  D FT
Sbjct: 316 MYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFT 375

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +CA L  L+ GA+ H L L  G      + N+LV +Y KC     A +LFD M 
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM- 434

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V W ++++ Y+  G+  E + LF +M    +  +  TF+  L AC  + F   G 
Sbjct: 435 LFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGC 494

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
              H+     G          +I +Y+R G++ EA   + Q+  + D++ W ++L+ 
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 260/734 (35%), Positives = 392/734 (53%), Gaps = 76/734 (10%)

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNSMLT 234
           TL  ++ AA      +     A +L+A YA   ++  A      +    +D+V  N++++
Sbjct: 70  TLSRDLPAAATLFCADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVIS 129

Query: 235 GFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNL--LNGKELHAYAIKQG 291
            + +      A+  FR L  +G  +PD       +SA G L N+   +  +LH   +K G
Sbjct: 130 AYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSG 189

Query: 292 FVSDLQIGNTLMDMYAKC--------------------------CCVNYMGR-------- 317
               L + N L+ +Y KC                            V Y+ R        
Sbjct: 190 AGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARS 249

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF ++  +  + W  +I+GY  +   ++A ELFR + LE +  D     SVL AC+ +  
Sbjct: 250 VFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGL 309

Query: 378 MSQTKEIHGYIIRKGL-----SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            +  K +HG IIR        + L + NA+V  Y KCGNI  +R +F+++  KDVVSW +
Sbjct: 310 FAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNT 369

Query: 433 -------------------------------MISSYVHNGLANEALELFYLMNEANVESD 461
                                          M+S YVH G A +AL+LF  M   NV+  
Sbjct: 370 ILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPC 429

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
             T   A++A   L  LK GK+L+G I++ GF    S  ++L+ MYARCGA+  A+ +F 
Sbjct: 430 DYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFL 489

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +   D + W +MI+A G HG G+ A++LF +M AE   PD I+FL +L AC+HSGL++E
Sbjct: 490 VMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDE 549

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G ++ E M+ D+ + P  +HY  L+DLLGRA  + EA   +++M  EPT  +W A+L  C
Sbjct: 550 GFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGC 609

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           R   + ELG   A +L ++ P + G Y+L+SN ++A+  W D  +VR  MR  G+KK PG
Sbjct: 610 RTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPG 669

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            SWIE GNK+H F+  D  H E+ E+YK L  +  K+ R+ GYV  T+ VLH++E  +K 
Sbjct: 670 CSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKM-RKLGYVPDTKVVLHDMEPHQKE 728

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
            +L+ HSERLA+ +G+L    G+ + + KNLR+C DCH+    +S+  GRE+VVRD  RF
Sbjct: 729 HILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRF 788

Query: 822 HHFEAGVCSCGDYW 835
           HHF+ G CSCG+YW
Sbjct: 789 HHFKDGECSCGNYW 802



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 256/583 (43%), Gaps = 89/583 (15%)

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE-KEDVVLWNSIISAYSASGQCLEALGLF 148
           D       SLVA YA       A   FD +   + D VL N++ISAY+ +     A+ +F
Sbjct: 85  DPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVF 144

Query: 149 REMQRVG-LVTNAYTFVAALQACEDSSFETLGM----EIHAATVKSGQNLQVYVANALIA 203
           R +   G L  + Y+F A L A        + +    ++H + +KSG    + V NAL+A
Sbjct: 145 RSLLASGSLRPDDYSFTALLSA--GGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVA 202

Query: 204 MYARCGK---MTEAAGVLYQLENKDSVS-------------------------------W 229
           +Y +C       +A  VL ++ NKD ++                               W
Sbjct: 203 LYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVW 262

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
           N+M++G+V + +  +A + FR +       D+    + +SA   +G   +GK +H   I+
Sbjct: 263 NAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIR 322

Query: 290 --QGFVSD--LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
               FV +  L + N L+  Y+KC  +    R+F  MT +D +SW TI++GY +++C  K
Sbjct: 323 LQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDK 382

Query: 346 ALELFRTVQLEG-LDADVMIIGSV------------------------------LMACSG 374
           A+E+F  +  +  L   VM+ G V                              + AC  
Sbjct: 383 AVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGE 442

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L  +   K++HG+I++ G        NA++ +Y +CG +  +  +F  + + D VSW +M
Sbjct: 443 LGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAM 502

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           IS+   +G   EALELF  M    +  D I+ ++ L+A +   ++ +G      + R   
Sbjct: 503 ISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFG 562

Query: 494 NLEGSVA-SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---GKVAI 548
            + G    + L+D+  R G +  A  +   +  +    +W ++++     G    G  A 
Sbjct: 563 IIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAA 622

Query: 549 DLFYKMEAESFAPDHI-TFLALLYACSHSGLINEGKKFLEIMR 590
           D  +KM      P H  T++ L    S +G   +  +  ++MR
Sbjct: 623 DQLFKM-----TPQHDGTYILLSNTYSAAGCWVDAARVRKLMR 660



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 223/517 (43%), Gaps = 90/517 (17%)

Query: 2   YGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDA 58
           Y     +  A   FD V  ++R     NA++ AY         +  +  +   G +  D 
Sbjct: 98  YAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDD 157

Query: 59  FTFPCVIKACAMLKDLDCG--AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD---FRKAR 113
           ++F  ++ A   L ++     A++H  VLK G      + N+LVA+Y KC      R AR
Sbjct: 158 YSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDAR 217

Query: 114 QLFDRMGEKEDV------------------------------VLWNSIISAYSASGQCLE 143
           ++ D M  K+D+                              V+WN++IS Y  SG  +E
Sbjct: 218 KVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVE 277

Query: 144 ALGLFREM--QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL----QVYV 197
           A  LFR M  +RV L  + +TF + L AC +      G  +H   ++   N      + V
Sbjct: 278 AFELFRRMVLERVPL--DEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPV 335

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
            NAL+  Y++CG +  A  +   +  KD VSWN++L+G+V++    KA++ F E+    +
Sbjct: 336 NNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNE 395

Query: 258 -------------------------------KPDQVCTVNAVSASGRLGNLLNGKELHAY 286
                                          KP       A++A G LG L +GK+LH +
Sbjct: 396 LSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGH 455

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            ++ GF      GN L+ MYA+C  V     +F  M   D +SW  +I+   Q+    +A
Sbjct: 456 IVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREA 515

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVIL 399
           LELF  +  EG+  D +   +VL AC+       G +     K   G I  +        
Sbjct: 516 LELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDH-----Y 570

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMIS 435
             ++D+ G+ G I  +R++ +++  +   S W +++S
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILS 607



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 48/274 (17%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSN------------------------- 36
           Y KCG++  A ++FD ++ + V +WN +L  YV +                         
Sbjct: 343 YSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMV 402

Query: 37  ------GEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYD 90
                 G     L+ +++MR   +    +T+   I AC  L  L  G ++HG +++ G++
Sbjct: 403 SGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFE 462

Query: 91  STDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFRE 150
            ++   N+L+ MYA+C   ++A  +F  M    D V WN++ISA    G   EAL LF  
Sbjct: 463 GSNSAGNALITMYARCGAVKEAHLMFLVM-PNIDSVSWNAMISALGQHGHGREALELFDR 521

Query: 151 MQRVGLVTNAYTFVAALQACEDSS--------FETLGMEIHAATVKSGQNLQVYVANALI 202
           M   G+  +  +F+  L AC  S         FE++  +     +  G++        LI
Sbjct: 522 MVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDF---GIIPGEDHY----TRLI 574

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
            +  R G++ EA  ++  +  + + S W ++L+G
Sbjct: 575 DLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSG 608



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 1/141 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG+V +A  +F  +      +WNAM+ A   +G     LE + RM   GI  D  +
Sbjct: 474 MYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRIS 533

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC     +D G +    +    G    +     L+ +  +     +AR L   M
Sbjct: 534 FLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTM 593

Query: 120 GEKEDVVLWNSIISAYSASGQ 140
             +    +W +I+S    SG 
Sbjct: 594 PFEPTPSIWEAILSGCRTSGD 614


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/692 (37%), Positives = 394/692 (56%), Gaps = 38/692 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCG--KMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           E+HA  +++G     + A+ L    A      +  A  +  Q+   +  +WN+++  +  
Sbjct: 43  EVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYAS 102

Query: 239 N-DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           + D +   + F   L      P++      + A+  L     G  +H  AIK  F  DL 
Sbjct: 103 SSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLY 162

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           I N+L+  Y  C  ++   R+F  ++ +D +SW ++I+ +AQ NC   ALELF  ++ E 
Sbjct: 163 ILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEREN 222

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           +  + + +  VL AC+    +   + +  YI RKG+  DL + NA++D+Y KCG++D ++
Sbjct: 223 VMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQ 282

Query: 417 NVFESIESKDVVSWTSM-------------------------------ISSYVHNGLANE 445
            +F+ +  +DV SWT M                               IS+Y  NG   E
Sbjct: 283 KLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKE 342

Query: 446 ALELFYLMNEANV-ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           AL +F  +  + + + D +TLVS LSA + L  +  G  ++ +I R+G  L   + SSLV
Sbjct: 343 ALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLV 402

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMYA+CG+L+ A +VF  V+ +D+ +W++MI   G+HGRGK AIDLF++M+     P+ +
Sbjct: 403 DMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSV 462

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF  +L ACSH+GL++EG+ F   M   Y + P  +HYAC+VD+LGRA  LEEA + +  
Sbjct: 463 TFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINE 522

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M   P+A VW ALLGAC +H N ELGE+ + +LL+L+P N G  VL+SN++A + +W+ V
Sbjct: 523 MSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKV 582

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            ++R  MR + LKK PG S IE    +H F+  D +H  S  IY KL EI  KL +  GY
Sbjct: 583 SELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKL-KSVGY 641

Query: 745 VAQTQFVLHNVEEEE-KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
                 +L  +EE++ K Q L  HSE+LAIA+G++       IR+ KNLR+C DCH+F K
Sbjct: 642 EPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAK 701

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           LVSR++ R++++RD  RFHHF  G CSC DYW
Sbjct: 702 LVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 229/475 (48%), Gaps = 54/475 (11%)

Query: 7   SVLD-AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD---AFTFP 62
           S LD A  LFD++ Q  ++TWN ++ AY S+ +P +    +  + +L    D    FTFP
Sbjct: 73  STLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIF--LDLLDKCEDLPNKFTFP 130

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
            VIKA + LK    G  +HG+ +K  +    +I+NSLV  Y  C D   A +LF  +  K
Sbjct: 131 FVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCK 190

Query: 123 EDVVLWNSIISAYSASGQCLE-ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            DVV WNS+ISA+ A G C E AL LF +M+R  ++ N+ T V  L AC        G  
Sbjct: 191 -DVVSWNSMISAF-AQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRW 248

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV---- 237
           + +   + G  + + + NA++ MY +CG + +A  +  ++  +D  SW  ML G+     
Sbjct: 249 VCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGD 308

Query: 238 ---------------------------QNDLYCKAMQFFRELQGAG-QKPDQVCTVNAVS 269
                                      QN    +A+  F ELQ +   KPD+V  V+ +S
Sbjct: 309 YDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLS 368

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A  +LG +  G  +H Y  ++G V +  + ++L+DMYAKC  +     VFY +  +D   
Sbjct: 369 ACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYV 428

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTK 382
           W+ +IAG   +     A++LF  +Q   +  + +   +VL ACS       G     + +
Sbjct: 429 WSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEME 488

Query: 383 EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
            ++G +      ++     +VD+ G+ G ++ +  +   + +    S W +++ +
Sbjct: 489 PVYGVV-----PEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGA 538



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 176/395 (44%), Gaps = 41/395 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YG CG +  AE+LF  +S + V +WN+M+ A+     P   LE + +M    +  ++ T 
Sbjct: 171 YGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTM 230

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA   DL+ G  +   + + G      + N+++ MY KC     A++LFD M E
Sbjct: 231 VGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPE 290

Query: 122 KE------------------------------DVVLWNSIISAYSASGQCLEALGLFREM 151
           ++                              ++  WN +ISAY  +G+  EAL +F E+
Sbjct: 291 RDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNEL 350

Query: 152 QRVGLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           Q   +   +  T V+ L AC       LG  IH    + G  L  ++ ++L+ MYA+CG 
Sbjct: 351 QLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGS 410

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           + +A  V Y +E +D   W++M+ G   +     A+  F E+Q A  KP+ V   N + A
Sbjct: 411 LEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCA 470

Query: 271 SGRLGNLLNGKE-LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
               G +  G+   H      G V +       M  YA  C V+ +GR  +   A + I+
Sbjct: 471 CSHAGLVDEGRVFFHEMEPVYGVVPE-------MKHYA--CMVDILGRAGFLEEAMELIN 521

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
             +     +     L A  L   V+L  L +D ++
Sbjct: 522 EMSTTPSASVWGALLGACSLHMNVELGELASDQLL 556



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 126/273 (46%), Gaps = 47/273 (17%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTW-------------------------------NAM 29
           MY KCGSV DA++LFD++ +R VF+W                               N +
Sbjct: 271 MYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVL 330

Query: 30  LGAYVSNGEPLRVLETYSRMRVLGIS-VDAFTFPCVIKACAMLKDLDCGAKIH------G 82
           + AY  NG+P   L  ++ +++  I+  D  T    + ACA L  +D G  IH      G
Sbjct: 331 ISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREG 390

Query: 83  LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCL 142
           +VL C       +++SLV MYAKC    KA ++F  + E+ DV +W+++I+     G+  
Sbjct: 391 IVLNC------HLISSLVDMYAKCGSLEKALEVFYSV-EERDVYVWSAMIAGLGMHGRGK 443

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG-MEIHAATVKSGQNLQVYVANAL 201
            A+ LF EMQ   +  N+ TF   L AC  +     G +  H      G   ++     +
Sbjct: 444 AAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACM 503

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
           + +  R G + EA  ++ ++    S S W ++L
Sbjct: 504 VDILGRAGFLEEAMELINEMSTTPSASVWGALL 536



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 13/143 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+  A ++F  V +R V+ W+AM+     +G     ++ +  M+   +  ++ T
Sbjct: 404 MYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVT 463

Query: 61  FPCVIKACAMLKDLDCG-------AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           F  V+ AC+    +D G         ++G+V +  + +       +V +  +     +A 
Sbjct: 464 FTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYAC------MVDILGRAGFLEEAM 517

Query: 114 QLFDRMGEKEDVVLWNSIISAYS 136
           +L + M       +W +++ A S
Sbjct: 518 ELINEMSTTPSASVWGALLGACS 540


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/709 (34%), Positives = 395/709 (55%), Gaps = 68/709 (9%)

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V+  N+L++M+A+ G++ +A GV  ++  +D+VSW  M+ G  +   + +A++   ++ 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC---- 309
             G  P Q    N +S+         G+++H++ +K G  S + + N++++MY KC    
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAE 216

Query: 310 ---------------------CCVNYMGR------VFYQMTAQDFISWTTIIAGYAQNNC 342
                                    ++GR      +F  M  +  +SW  +IAGY QN  
Sbjct: 217 TASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGL 276

Query: 343 HLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILN 400
             KAL+LF R +    +  D   I SVL AC+ L  +   K++H YI+R  ++ +  + N
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336

Query: 401 AIVDVYGKCGNIDYSRNV---------------------------------FESIESKDV 427
           A++  Y K G+++ +R +                                 F  + ++DV
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           V+WT+MI  Y  NG  +EA++LF  M     E +S TL + LS  +SL+ L  GK+++  
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCR 456

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKDLILWTSMINANGLHGRGKV 546
            IR       SV+++++ MYAR G+   A ++F+ V   K+ I WTSMI A   HG+G+ 
Sbjct: 457 AIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           A+ LF +M      PD IT++ +L ACSH+G +NEGK++ + ++ ++Q+ P   HYAC+V
Sbjct: 517 AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMV 576

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           DLL RA    EA +F+R M +EP A  W +LL ACRVH N EL E+ A+KLL +DP N G
Sbjct: 577 DLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSG 636

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
            Y  I+NV++A  +W D  ++    +   ++K  G SW  I +KIH F A D  H + D 
Sbjct: 637 AYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDA 696

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
           +Y   A + E++ +  G+V   Q VLH+V++E K ++L  HSE+LAIA+G++ + E + +
Sbjct: 697 VYAMAARMWEEI-KGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 755

Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           R+ KNLRVC DCH+  K +S++  RE++VRDA RFHHF  G+CSC DYW
Sbjct: 756 RVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 154/589 (26%), Positives = 259/589 (43%), Gaps = 105/589 (17%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD----FRKARQLFDRM 119
           +++ C    +   G  IH   +K G  ++ ++ N+L++ Y +        R AR+LFD +
Sbjct: 32  LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91

Query: 120 G-EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV------------------------ 154
              + +V  WNS++S ++ SG+  +A G+F EM                           
Sbjct: 92  PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151

Query: 155 -------GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
                  G     +T    L +C  +    +G ++H+  VK G    V VAN+++ MY +
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGK 211

Query: 208 C-------------------------------GKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           C                               G+M  A  +   +  +  VSWN+M+ G+
Sbjct: 212 CGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGY 271

Query: 237 VQNDLYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            QN L  KA++ F R L  +   PD+    + +SA   LGN+  GK++HAY ++     +
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYN 331

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQ---------------------------------M 322
            Q+ N L+  YAK   V    R+  Q                                 M
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
             +D ++WT +I GY QN  + +A++LFR++   G + +   + +VL  C+ L C+   K
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451

Query: 383 EIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHN 440
           +IH   IR  L     + NAI+ +Y + G+  ++R +F+ +   K+ ++WTSMI +   +
Sbjct: 452 QIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 511

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSV 499
           G   EA+ LF  M  A VE D IT V  LSA S    + +GK     I  +     E S 
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 571

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA 547
            + +VD+ AR G    A +    +  + D I W S+++A  +H   ++A
Sbjct: 572 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA 620



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/504 (23%), Positives = 216/504 (42%), Gaps = 68/504 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ K G + DA  +F ++ +R   +W  M+      G     ++T   M   G +   FT
Sbjct: 107 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 166

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +CA+ +    G K+H  V+K G  S   + NS++ MY KC D   A  +F+RM 
Sbjct: 167 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMP 226

Query: 121 EK------------------------------EDVVLWNSIISAYSASGQCLEALGLF-R 149
            +                                +V WN++I+ Y+ +G   +AL LF R
Sbjct: 227 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSR 286

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
            +    +  + +T  + L AC +     +G ++HA  +++       V NALI+ YA+ G
Sbjct: 287 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 346

Query: 210 KMTEAAGVLYQ---------------------------------LENKDSVSWNSMLTGF 236
            +  A  ++ Q                                 + N+D V+W +M+ G+
Sbjct: 347 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 406

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            QN    +A+  FR +   G +P+       +S    L  L  GK++H  AI+       
Sbjct: 407 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSS 466

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            + N ++ MYA+     +  R+F Q+   ++ I+WT++I   AQ+    +A+ LF  +  
Sbjct: 467 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 526

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNID 413
            G++ D +    VL ACS    +++ K  +  I  +     ++     +VD+  + G   
Sbjct: 527 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 586

Query: 414 YSRNVFESIE-SKDVVSWTSMISS 436
            ++     +    D ++W S++S+
Sbjct: 587 EAQEFIRRMPVEPDAIAWGSLLSA 610


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 256/746 (34%), Positives = 414/746 (55%), Gaps = 77/746 (10%)

Query: 166 ALQACEDSSFETLGM--EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY---Q 220
           AL  C  SS  +L    + HA  ++        +  +L++ YA    ++     L     
Sbjct: 4   ALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSH 63

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           L +    S++S++  F ++  +   +  F  L      PD     +A+ +   L  L  G
Sbjct: 64  LPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG 123

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ- 339
           ++LHA+A   GF++D  + ++L  MY KC  +    ++F +M  +D + W+ +IAGY++ 
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRL 183

Query: 340 ----------------------------------NNCHLKALELFRTVQLEGLDADVMII 365
                                             N  + +A+ +FR + ++G   D   +
Sbjct: 184 GLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTV 243

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIES 424
             VL A   L+ +    ++HGY+I++GL SD  +++A++D+YGKCG +     VF+ +E 
Sbjct: 244 SCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEE 303

Query: 425 -----------------------------KD------VVSWTSMISSYVHNGLANEALEL 449
                                        KD      VV+WTS+I+S   NG   EALEL
Sbjct: 304 MEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALEL 363

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           F  M    VE +++T+ S + A  ++S L  GKE++ F +R+G   +  V S+L+DMYA+
Sbjct: 364 FRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAK 423

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CG + +A + F+ +   +L+ W +++    +HG+ K  +++F+ M      PD +TF  +
Sbjct: 424 CGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCV 483

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           L AC+ +GL  EG +    M  ++ ++P  EHYACLV LL R   LEEAY  ++ M  EP
Sbjct: 484 LSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEP 543

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
            A VW ALL +CRVH+N  LGEI A+KL  L+P NPGNY+L+SN++A+   W +  ++R 
Sbjct: 544 DACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIRE 603

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
            M+  GL+K PG SWIE+G+K+H  +A D+SH +  +I +KL ++  ++++  GY+ +T 
Sbjct: 604 VMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKS-GYLPKTN 662

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
           FVL +VEE++K Q+L GHSE+LA+  G+L ++ G  +++ KNLR+C DCH+  K++SRL 
Sbjct: 663 FVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLE 722

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
           GRE+ VRD NRFHHF+ GVCSCGD+W
Sbjct: 723 GREIYVRDTNRFHHFKDGVCSCGDFW 748



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 244/521 (46%), Gaps = 88/521 (16%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           L   +   T+F++++++ A+  +     VL T+S +  L +  DAF  P  IK+CA L+ 
Sbjct: 60  LSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRA 119

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
           LD G ++H      G+ +   + +SL  MY KC     AR+LFDRM ++ DVV+W+++I+
Sbjct: 120 LDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDR-DVVVWSAMIA 178

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF--ETLGM----------- 180
            YS  G   EA  LF EM+  G+  N  ++   L    ++ F  E +GM           
Sbjct: 179 GYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWP 238

Query: 181 ----------------------EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
                                 ++H   +K G     +V +A++ MY +CG + E + V 
Sbjct: 239 DGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVF 298

Query: 219 YQLENKDSVSWNSMLTGFVQNDLY-----------------------------------C 243
            ++E  +  S N+ LTG  +N +                                     
Sbjct: 299 DEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDL 358

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A++ FR++Q  G +P+ V   + + A G +  L++GKE+H +++++G   D+ +G+ L+
Sbjct: 359 EALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALI 418

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMYAKC  +    R F +M+A + +SW  ++ GYA +    + +E+F  +   G   D++
Sbjct: 419 DMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLV 478

Query: 364 IIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
               VL AC+       G +C +   E HG  I   +     L   V +  + G ++ + 
Sbjct: 479 TFTCVLSACAQNGLTEEGWRCYNSMSEEHG--IEPKMEHYACL---VTLLSRVGKLEEAY 533

Query: 417 NVFESIE-SKDVVSWTSMISS-YVHNGLA---NEALELFYL 452
           ++ + +    D   W +++SS  VHN L+     A +LF+L
Sbjct: 534 SIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFL 574



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 160/344 (46%), Gaps = 72/344 (20%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR---------- 50
           MY KC  +LDA +LFD++  R V  W+AM+  Y   G      E +  MR          
Sbjct: 148 MYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVS 207

Query: 51  -------------------------VLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
                                    V G   D  T  CV+ A   L+D+  GA++HG V+
Sbjct: 208 WNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVI 267

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE---------------------- 123
           K G  S  F+V++++ MY KC   ++  ++FD + E E                      
Sbjct: 268 KQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALE 327

Query: 124 ------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
                       +VV W SII++ S +G+ LEAL LFR+MQ  G+  NA T  + + AC 
Sbjct: 328 VFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACG 387

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           + S    G EIH  +++ G    VYV +ALI MYA+CG++  A     ++   + VSWN+
Sbjct: 388 NISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNA 447

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQV---CTVNAVSASG 272
           ++ G+  +    + M+ F  +  +GQKPD V   C ++A + +G
Sbjct: 448 VMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNG 491



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A + FDK+S   + +WNA++  Y  +G+    +E +  M   G   D  T
Sbjct: 420 MYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVT 479

Query: 61  FPCVIKACAMLKDLDCG-------AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           F CV+ ACA     + G       ++ HG+  K  + +       LV + ++     +A 
Sbjct: 480 FTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYAC------LVTLLSRVGKLEEAY 533

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
            +   M  + D  +W +++S+
Sbjct: 534 SIIKEMPFEPDACVWGALLSS 554


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/727 (35%), Positives = 393/727 (54%), Gaps = 76/727 (10%)

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNSMLTGFVQNDL 241
           AA  +S  +     A +L+A +A  G++ +AA     +    +D+V  N+M++ F +  L
Sbjct: 83  AALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASL 142

Query: 242 YCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGK--ELHAYAIKQGFVSDLQI 298
              A+  F  L G+G  +PD       +SA G++ NL      +LH   +K G  + L +
Sbjct: 143 AAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSV 202

Query: 299 GNTLMDMYAKC--------------------------CCVNYMGR--------VFYQMTA 324
            N L+ +Y KC                            V Y+ R        VF ++  
Sbjct: 203 SNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDG 262

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +  + W  +I+GY Q+     A ELFR +  E +  D     SVL AC+        K +
Sbjct: 263 KFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSV 322

Query: 385 HGYIIRKGL-----SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS------- 432
           HG IIR        + L + NA+V +Y K G I  ++ +F+++  KDVVSW +       
Sbjct: 323 HGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYID 382

Query: 433 ------------------------MISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
                                   M+S YVH GL+ +AL+LF  M   +V+    T   A
Sbjct: 383 SGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGA 442

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           ++A   L  LK G++L+  +++ GF    S  ++L+ MYA+CGA++ A  VF  +   D 
Sbjct: 443 IAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDS 502

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
           + W +MI+A G HG G+ A++LF +M AE   PD I+FL +L AC+H+GL++EG  + E 
Sbjct: 503 VSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFES 562

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           M+ D+ + P  +HYA L+DLLGR+  + EA   +++M  EPT  +W A+L  CR + + E
Sbjct: 563 MKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 622

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
            G   A +L  + P + G Y+L+SN ++A+ +W D  +VR  MR  G+KK PG SWIE+G
Sbjct: 623 FGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVG 682

Query: 709 NKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHS 768
           +KIH F+  D  H E+ E+Y+ L  I  ++ R+ GYV  T+FVLH++E  EK  +L+ HS
Sbjct: 683 SKIHVFLVGDTKHPEAQEVYQFLEVIGARM-RKLGYVPDTKFVLHDMEPHEKEYILFAHS 741

Query: 769 ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
           E+LA+ +G+LK   G+ + + KNLR+C DCH+    +S+  GRE+VVRD  RFHHF+ G 
Sbjct: 742 EKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGE 801

Query: 829 CSCGDYW 835
           CSCG+YW
Sbjct: 802 CSCGNYW 808



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 231/521 (44%), Gaps = 86/521 (16%)

Query: 2   YGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDA 58
           +   G + DA   FD V  ++R     NAM+ A+         +  +  +   G +  D 
Sbjct: 104 HAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDD 163

Query: 59  FTFPCVIKACAMLKDLDCG--AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR---KAR 113
           ++F  +I A   + +L      ++H  VLK G  +   + N+L+A+Y KC        AR
Sbjct: 164 YSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDAR 223

Query: 114 QLFDRMGEKEDV------------------------------VLWNSIISAYSASGQCLE 143
           ++ D M +K+D+                              V+WN++IS Y  SG C +
Sbjct: 224 KVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCAD 283

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL----QVYVAN 199
           A  LFR M    +  + +TF + L AC ++ F   G  +H   ++   N      + V N
Sbjct: 284 AFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNN 343

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV-----------------QNDLY 242
           AL+ +Y++ GK+  A  +   +  KD VSWN++L+G++                 +NDL 
Sbjct: 344 ALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLS 403

Query: 243 C--------------KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
                           A++ F +++    KP       A++A G LG L +G++LHA+ +
Sbjct: 404 WMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLV 463

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           + GF +    GN L+ MYAKC  VN    VF  M   D +SW  +I+   Q+    +ALE
Sbjct: 464 QCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALE 523

Query: 349 LFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNA 401
           LF  +  EG+D D +   ++L AC+       G       K   G  I  G      L  
Sbjct: 524 LFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFG--ISPGEDHYARL-- 579

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISSYVHNG 441
            +D+ G+ G I  +R++ +++  +   S W +++S    NG
Sbjct: 580 -IDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 619



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 152/628 (24%), Positives = 275/628 (43%), Gaps = 96/628 (15%)

Query: 84  VLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE-KEDVVLWNSIISAYSASGQCL 142
           + +   D       SLVA +A     R A   FD +   + D VL N+++SA++ +    
Sbjct: 85  LFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAA 144

Query: 143 EALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLG----MEIHAATVKSGQNLQVYV 197
            A+ +F  +   G L  + Y+F A + A        L      ++H + +KSG    + V
Sbjct: 145 PAVSVFHALLGSGSLRPDDYSFTALISAV--GQMHNLAAPHCTQLHCSVLKSGAAAVLSV 202

Query: 198 ANALIAMYARC----------------------------------GKMTEAAGVLYQLEN 223
           +NALIA+Y +C                                  G +  A  V  +++ 
Sbjct: 203 SNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDG 262

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           K  V WN+M++G+VQ+ +   A + FR +       D+    + +SA    G  ++GK +
Sbjct: 263 KFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSV 322

Query: 284 HAYAIK--QGFVSD--LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           H   I+    FV +  L + N L+ +Y+K   +    R+F  M  +D +SW TI++GY  
Sbjct: 323 HGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYID 382

Query: 340 NNCHLKALELFRTVQLE---------------GLDADVMII----------------GSV 368
           + C  KA+E+F+ +  +               GL  D + +                   
Sbjct: 383 SGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGA 442

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           + AC  L  +   +++H ++++ G  +     NA++ +Y KCG ++ +R VF  + + D 
Sbjct: 443 IAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDS 502

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           VSW +MIS+   +G   EALELF  M    ++ D I+ ++ L+A +   ++ +G      
Sbjct: 503 VSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFES 562

Query: 488 IIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINA---NGLHG 542
           + R  G +      + L+D+  R G +  A  +   +  +    +W ++++    NG   
Sbjct: 563 MKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 622

Query: 543 RGKVAIDLFYKMEAESFAPDHI-TFLALLYACSHSGLINEGKKFLEIMR-CDYQLDP--- 597
            G  A D  ++M      P H  T++ L    S +G   +  +  ++MR    + +P   
Sbjct: 623 FGAYAADQLFRM-----IPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCS 677

Query: 598 WPEHYACL-VDLLGRANHLE--EAYQFV 622
           W E  + + V L+G   H E  E YQF+
Sbjct: 678 WIEVGSKIHVFLVGDTKHPEAQEVYQFL 705



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 146/318 (45%), Gaps = 56/318 (17%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG------EPLRV------------ 42
           +Y K G ++ A+++FD ++ + V +WN +L  Y+ +G      E  +V            
Sbjct: 348 LYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVM 407

Query: 43  -------------LETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                        L+ +++MR   +    +T+   I AC  L  L  G ++H  +++CG+
Sbjct: 408 VSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGF 467

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           ++++   N+L+ MYAKC     AR +F  M    D V WN++ISA    G   EAL LF 
Sbjct: 468 EASNSAGNALLTMYAKCGAVNDARLVFLVM-PNLDSVSWNAMISALGQHGHGREALELFD 526

Query: 150 EMQRVGLVTNAYTFVAALQACEDSS--------FETLGMEIHAATVKSGQNLQVYVANAL 201
           +M   G+  +  +F+  L AC  +         FE++  +     +  G++        L
Sbjct: 527 QMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDF---GISPGEDHYAR----L 579

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTGFVQN-DLYCKAM---QFFREL-QGA 255
           I +  R G++ EA  ++  +  + + S W ++L+G   N D+   A    Q FR + Q  
Sbjct: 580 IDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHD 639

Query: 256 GQKPDQVCTVNAVSASGR 273
           G     +   N  SA+GR
Sbjct: 640 GT---YILLSNTYSAAGR 654


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/709 (34%), Positives = 395/709 (55%), Gaps = 68/709 (9%)

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V+  N+L++M+A+ G++ +A GV  ++  +D+VSW  M+ G  +   + +A++   ++ 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC---- 309
             G  P Q    N +S+         G+++H++ +K G  S + + N++++MY KC    
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSE 216

Query: 310 ---------------------CCVNYMGR------VFYQMTAQDFISWTTIIAGYAQNNC 342
                                    ++GR      +F  M  +  +SW  +IAGY QN  
Sbjct: 217 TATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGL 276

Query: 343 HLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILN 400
             KAL+LF R +    +  D   I SVL AC+ L  +   K++H YI+R  ++ +  + N
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336

Query: 401 AIVDVYGKCGNIDYSRNV---------------------------------FESIESKDV 427
           A++  Y K G+++ +R +                                 F  + ++DV
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           V+WT+MI  Y  NG  +EA++LF  M     E +S TL + LS  +SL+ L  GK+++  
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCR 456

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKDLILWTSMINANGLHGRGKV 546
            IR       SV+++++ MYAR G+   A ++F+ V   K+ I WTSMI A   HG+G+ 
Sbjct: 457 AIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           A+ LF +M      PD IT++ +L ACSH+G +NEGK++ + ++ ++Q+ P   HYAC+V
Sbjct: 517 AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMV 576

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           DLL RA    EA +F+R M +EP A  W +LL ACRVH N EL E+ A+KLL +DP N G
Sbjct: 577 DLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSG 636

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
            Y  I+NV++A  +W D  ++    +   ++K  G SW  I +KIH F A D  H + D 
Sbjct: 637 AYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDA 696

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
           +Y   A + E++ +  G+V   Q VLH+V++E K ++L  HSE+LAIA+G++ + E + +
Sbjct: 697 VYAMAARMWEEI-KGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 755

Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           R+ KNLRVC DCH+  K +S++  RE++VRDA RFHHF  G+CSC DYW
Sbjct: 756 RVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/589 (26%), Positives = 260/589 (44%), Gaps = 105/589 (17%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD----FRKARQLFDRM 119
           +++ C    +   G  IH   +K G  ++ ++ N+L++ Y +        R AR+LFD +
Sbjct: 32  LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91

Query: 120 G-EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV------------------------ 154
              + +V  WNS++S ++ SG+  +A G+F EM                           
Sbjct: 92  PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151

Query: 155 -------GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
                  G     +T    L +C  +    +G ++H+  VK G    V VAN+++ MY +
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGK 211

Query: 208 C-------------------------------GKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           C                               G+M  A  +   + ++  VSWN+M+ G+
Sbjct: 212 CGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGY 271

Query: 237 VQNDLYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            QN L  KA++ F R L  +   PD+    + +SA   LGN+  GK++HAY ++     +
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYN 331

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQ---------------------------------M 322
            Q+ N L+  YAK   V    R+  Q                                 M
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
             +D ++WT +I GY QN  + +A++LFR++   G + +   + +VL  C+ L C+   K
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451

Query: 383 EIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHN 440
           +IH   IR  L     + NAI+ +Y + G+  ++R +F+ +   K+ ++WTSMI +   +
Sbjct: 452 QIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 511

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSV 499
           G   EA+ LF  M  A VE D IT V  LSA S    + +GK     I  +     E S 
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 571

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA 547
            + +VD+ AR G    A +    +  + D I W S+++A  +H   ++A
Sbjct: 572 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA 620



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/504 (23%), Positives = 216/504 (42%), Gaps = 68/504 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ K G + DA  +F ++ +R   +W  M+      G     ++T   M   G +   FT
Sbjct: 107 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 166

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +CA+ +    G K+H  V+K G  S   + NS++ MY KC D   A  +F+RM 
Sbjct: 167 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 226

Query: 121 EK------------------------------EDVVLWNSIISAYSASGQCLEALGLF-R 149
            +                                +V WN++I+ Y+ +G   +AL LF R
Sbjct: 227 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 286

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
            +    +  + +T  + L AC +     +G ++HA  +++       V NALI+ YA+ G
Sbjct: 287 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 346

Query: 210 KMTEAAGVLYQ---------------------------------LENKDSVSWNSMLTGF 236
            +  A  ++ Q                                 + N+D V+W +M+ G+
Sbjct: 347 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 406

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            QN    +A+  FR +   G +P+       +S    L  L  GK++H  AI+       
Sbjct: 407 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 466

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            + N ++ MYA+     +  R+F Q+   ++ I+WT++I   AQ+    +A+ LF  +  
Sbjct: 467 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 526

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNID 413
            G++ D +    VL ACS    +++ K  +  I  +     ++     +VD+  + G   
Sbjct: 527 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 586

Query: 414 YSRNVFESIE-SKDVVSWTSMISS 436
            ++     +    D ++W S++S+
Sbjct: 587 EAQEFIRRMPVEPDAIAWGSLLSA 610


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/673 (36%), Positives = 404/673 (60%), Gaps = 5/673 (0%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNL-QVYVANALIAMYARCGKMTEAAGVLYQLENKD 225
           LQ+C  +     G  +HA  V SG      ++AN LI MY+ C  +  A  +   +  ++
Sbjct: 27  LQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRN 86

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           +VSW ++++G  QN ++  A+  F  ++ AG  P +    +A  A+  LG  L G +LH 
Sbjct: 87  AVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHC 146

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
             ++ GF ++L + + L DMY+KC  ++   RVF QM  +D ++WT +I GYA+N     
Sbjct: 147 VGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEA 206

Query: 346 ALELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIV 403
           A+  FR ++ EGL  AD  +  SVL A  GLK    +K IH  + + G   ++ + NA++
Sbjct: 207 AVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALI 266

Query: 404 DVYGKCGNIDYSRNVFE-SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           D+Y K  +++ +  V +      +VVS TSMI  Y+      EAL ++  +    VE + 
Sbjct: 267 DMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNE 326

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
            T  S +   +  ++L++G +L+  +I+     +  V S+LVDMY +CG + ++ ++FN 
Sbjct: 327 FTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNE 386

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           ++ +  I W ++IN    HG G+ AI  F +M      P+HI F++LL ACSH+GL++EG
Sbjct: 387 IEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEG 446

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
            K+   M+  + ++P  EHY+C++D  GRA  L+EAY+F+  M I+P A  WC+LLGACR
Sbjct: 447 LKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACR 506

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
           +  +KELGE+ A+ L++L+PGN G +V +S ++A+  +W+DV+ VR  MR S +KK PG 
Sbjct: 507 MRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGF 566

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQ 762
           SW++   K H F + D SH +  +IY+KL E+T +++ E GY+  T F+  N+E+  K +
Sbjct: 567 SWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEE-GYIPDTSFLPCNLEDIAKER 625

Query: 763 MLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFH 822
           +L  HSER+A+A+ ++       I + KNLR+C+DCH+  K + ++  R+++VRD +RFH
Sbjct: 626 ILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFH 685

Query: 823 HFEAGVCSCGDYW 835
           HF  G CSCGDYW
Sbjct: 686 HFVNGRCSCGDYW 698



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 252/502 (50%), Gaps = 10/502 (1%)

Query: 64  VIKACAMLKDLDCGAKIHG-LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           ++++C    DL  G  +H  LVL     ++ F+ N L+ MY+ C D   A +LF  M  +
Sbjct: 26  LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM-PR 84

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            + V W +++S  S +    +AL  F  M+R G+    +   +A +A         G ++
Sbjct: 85  RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQL 144

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H   V+ G + +++VA+ L  MY++CG ++EA  V  Q+  KD+V+W +M+ G+ +N   
Sbjct: 145 HCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSL 204

Query: 243 CKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             A+  FR+++  G    DQ    + +SASG L +    K +H    K GF  ++ + N 
Sbjct: 205 EAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNA 264

Query: 302 LMDMYAKCCCVNYMGRVF-YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           L+DMYAK   V    RV        + +S T++I GY + +C  +AL ++  ++ +G++ 
Sbjct: 265 LIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEP 324

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           +     S++  C+    + Q  ++H  +I+  L  D  + + +VD+YGKCG I  S  +F
Sbjct: 325 NEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLF 384

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             IE +  ++W ++I+ +  +G   EA++ F  M  + +  + I  VS L+A S   ++ 
Sbjct: 385 NEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVD 444

Query: 480 KG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           +G K         G   +    S ++D Y R G LD A K  + +  K +   W S++ A
Sbjct: 445 EGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 504

Query: 538 NGLHGR---GKVAIDLFYKMEA 556
             + G    G+VA     K+E 
Sbjct: 505 CRMRGSKELGEVAAQNLMKLEP 526



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 218/450 (48%), Gaps = 24/450 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C  +  A +LF  + +R   +W  ++     N      L  ++ MR  G++   F 
Sbjct: 65  MYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFA 124

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
                +A A L     GA++H + ++ G+D+  F+ ++L  MY+KC    +A ++FD+M 
Sbjct: 125 LSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMP 184

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
           +K D V W ++I  Y+ +G    A+  FR+M+R GLV  + + F + L A        L 
Sbjct: 185 QK-DAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLS 243

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN-----SMLT 234
             IH    K+G  L+V V NALI MYA+   +  A+ VL      D   WN     SM+ 
Sbjct: 244 KSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL----KIDPGGWNVVSGTSMID 299

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
           G+++ D   +A+  + EL+  G +P++    + +        L  G +LHA  IK   + 
Sbjct: 300 GYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIR 359

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D  +G+TL+DMY KC  ++   ++F ++  +  I+W  +I  +AQ+    +A++ F  + 
Sbjct: 360 DSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMI 419

Query: 355 LEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYG 407
             G+  + +   S+L ACS       GLK     KE HG   ++        + I+D YG
Sbjct: 420 YSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEH-----YSCIIDTYG 474

Query: 408 KCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           + G +D +      +  K +   W S++ +
Sbjct: 475 RAGRLDEAYKFISEMPIKPNAYGWCSLLGA 504


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/656 (37%), Positives = 387/656 (58%), Gaps = 8/656 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF---IVNSLVAMYAKCYDFRKARQLFD 117
           +  +++ C   K +    +IH   +  G  S+ +   +++SL A YA       AR+LFD
Sbjct: 21  YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFE 176
            +     +  WN++I  Y+ SG   +ALGLF +M   G    + YT+   ++AC D    
Sbjct: 81  EL-RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLP 139

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            +G  IHA TV SG +   +V N+L+AMY  CG+M  A  V   +  +  VSWN+M+ G+
Sbjct: 140 EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGY 199

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            +N    +A+  F  + G G +PD    V+ +     L  L  G+ +HA    +    D+
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N+L+DMYAKC  ++    +FY+M  +D +SWTT++ GY  N     AL L + +Q E
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
            +  + + + SVL AC+ L  +   + +HG+ IR+ L S++++  A++D+Y KC N++ S
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             VF     +    W ++IS  +HNGL+ +A+ELF  M    V+ +  TL S L A + L
Sbjct: 380 FRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFL 439

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV--QTKDLILWTS 533
           + L++ + ++G++IR GF     VA+ L+D+Y++CG+L+ A+ +FN +  + KD+I W++
Sbjct: 440 TDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSA 499

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           +I   G+HG G+ AI LF +M      P+ ITF ++L+ACSH+GL++EG    + M  D 
Sbjct: 500 IIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDN 559

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
           Q+    +HY C++DLLGRA  LEEAY+ +R+M   P   VW ALLG+C +H N ELGE+ 
Sbjct: 560 QMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVA 619

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
           AK L EL+PGN GNYVL++N+++A  +W+D E VR+ M   GL+KTP  S IE+ N
Sbjct: 620 AKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 180/570 (31%), Positives = 305/570 (53%), Gaps = 22/570 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS-VDAFT 60
           Y   G    A +LFD++   ++F+WNAM+  Y ++G     L  + +M   G    D +T
Sbjct: 66  YAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYT 125

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P VIKAC      + GA IH   +  G+DS  F+ NSL+AMY  C +   AR++FD M 
Sbjct: 126 YPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMR 185

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+  +V WN++I+ Y  +G   EAL +F  M   G+  +  T V+ L  C       +G 
Sbjct: 186 ERT-LVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGR 244

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA          + V N+L+ MYA+CG M EA  + Y+++ +D VSW +M+ G++ N 
Sbjct: 245 RVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNG 304

Query: 241 ------LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
                 L C+ MQF         KP+ V   + +SA   L +L +G+ LH +AI+Q   S
Sbjct: 305 DARSALLLCQMMQF------ESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLES 358

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           ++ +   L+DMYAKC  VN   RVF + + Q    W  II+G   N    KA+ELF+ + 
Sbjct: 359 EVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQML 418

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNID 413
           +E +D +   + S+L A + L  + Q + +HGY+IR G LS + +   ++D+Y KCG+++
Sbjct: 419 MEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLE 478

Query: 414 YSRNVFESI--ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
            + N+F  I  + KD+++W+++I+ Y  +G    A+ LF  M ++ V+ + IT  S L A
Sbjct: 479 SAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHA 538

Query: 472 ASSLSILKKGKELNGFIIRKG-FNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLI 529
            S   ++ +G  L  F++     +L     + ++D+  R G L+ A ++   +  + +  
Sbjct: 539 CSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHA 598

Query: 530 LWTSMINANGLHGR---GKVAIDLFYKMEA 556
           +W +++ +  +H     G+VA    +++E 
Sbjct: 599 VWGALLGSCVIHENVELGEVAAKWLFELEP 628



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 216/443 (48%), Gaps = 6/443 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG +  A ++FD + +RT+ +WN M+  Y  NG     L  +  M   GI  D  T
Sbjct: 167 MYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCAT 226

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+  C+ LK+L+ G ++H LV          + NSL+ MYAKC +  +A+ +F  M 
Sbjct: 227 VVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEM- 285

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K DVV W ++++ Y  +G    AL L + MQ   +  N  T  + L AC        G 
Sbjct: 286 DKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGR 345

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   ++     +V V  ALI MYA+C  +  +  V  +   + +  WN++++G + N 
Sbjct: 346 CLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNG 405

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  KA++ F+++      P+     + + A   L +L   + +H Y I+ GF+S +++  
Sbjct: 406 LSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVAT 465

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTA--QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            L+D+Y+KC  +     +F  +    +D I+W+ IIAGY  +     A+ LF  +   G+
Sbjct: 466 ILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGV 525

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYSR 416
             + +   S+L ACS    + +   +  +++      L       ++D+ G+ G ++ + 
Sbjct: 526 KPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAY 585

Query: 417 NVFESIESK-DVVSWTSMISSYV 438
            +  ++  + +   W +++ S V
Sbjct: 586 ELIRTMAFRPNHAVWGALLGSCV 608


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 271/754 (35%), Positives = 416/754 (55%), Gaps = 3/754 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CG + D   LF  +       WN M+      G     L  Y +M    +S D +T
Sbjct: 88  LYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYT 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP VIKAC  L ++     +H      G+    F+ ++L+ +YA       AR++FD + 
Sbjct: 148 FPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP 207

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ D +LWN ++  Y  SG    A+G F  M+    + N+ T+   L  C       LG 
Sbjct: 208 QR-DTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGT 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   + SG      VAN L+AMY++CG + +A  +   +   D+V+WN ++ G+VQN 
Sbjct: 267 QVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNG 326

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F  +  AG KPD V   + + +    G+L + KE+H+Y ++     D+ + +
Sbjct: 327 FTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKS 386

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y K   V    ++F Q T  D    T +I+GY  +  ++ A+  FR +  EG+  
Sbjct: 387 ALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVP 446

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVF 419
           + + + SVL AC+ L  +   KE+H  I++K L ++V + +AI D+Y KCG +D +   F
Sbjct: 447 NSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFF 506

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +   D + W SMISS+  NG    A++LF  M  +  + DS++L SALS+A++L  L 
Sbjct: 507 RRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALY 566

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GKE++G++IR  F+ +  VAS+L+DMY++CG L +A  VFN +  K+ + W S+I A G
Sbjct: 567 YGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYG 626

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG  +  +DLF++M      PDH+TFL ++ AC H+GL+ EG  +   M  +Y +    
Sbjct: 627 NHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARM 686

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYAC+VDL GRA  L EA+  ++SM   P A VW  LLGACR+H N EL ++ ++ LLE
Sbjct: 687 EHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLE 746

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LDP N G YVL+SNV A + +W  V +VR  M+  G++K PG SWI++    H F A + 
Sbjct: 747 LDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEG 806

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
           +H ES EIY           R+ GYV Q    LH
Sbjct: 807 NHPESVEIYLI-LNSLLLELRKQGYVPQPYLPLH 839



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 240/492 (48%), Gaps = 19/492 (3%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
            +AC D+S      ++H   +  G +    +++ ++ +Y  CG++++   + + LE  ++
Sbjct: 51  FRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNA 110

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           + WN M+ G      +  A+ F+ ++ G+   PD+      + A G L N+     +H  
Sbjct: 111 LPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNT 170

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
           A   GF  DL +G+ L+ +YA    +    RVF ++  +D I W  ++ GY ++     A
Sbjct: 171 ARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNA 230

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK-----EIHGYIIRKGLS-DLVILN 400
           +  F      G+     ++ SV   C    C ++ K     ++HG +I  G   D  + N
Sbjct: 231 MGTFC-----GMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVAN 285

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
            +V +Y KCGN+  +R +F ++   D V+W  +I+ YV NG  +EA  LF  M  A V+ 
Sbjct: 286 TLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKP 345

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           DS+T  S L +      L+  KE++ +I+R     +  + S+L+D+Y + G +++A K+F
Sbjct: 346 DSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIF 405

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
                 D+ + T+MI+   LHG    AI+ F  +  E   P+ +T  ++L AC+    + 
Sbjct: 406 QQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALK 465

Query: 581 EGKKFLEIMRCDY---QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
            GK+    + CD    QL+      + + D+  +   L+ AY+F R M  E  +  W ++
Sbjct: 466 LGKE----LHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-ETDSICWNSM 520

Query: 638 LGACRVHSNKEL 649
           + +   +   E+
Sbjct: 521 ISSFSQNGKPEM 532



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 15/293 (5%)

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGK 408
           + T QLE          S+  ACS    + Q +++H  II  G+SD+  L++ ++ +Y  
Sbjct: 42  YLTTQLE----------SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVL 91

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           CG I    N+F  +E  + + W  MI      G  + AL  ++ M  +NV  D  T    
Sbjct: 92  CGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYV 151

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           + A   L+ +     ++      GF+++  V S+L+ +YA  G +  A +VF+ +  +D 
Sbjct: 152 IKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDT 211

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE- 587
           ILW  M++     G    A+  F  M       + +T+  +L  C+  G    G +    
Sbjct: 212 ILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGL 271

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           ++   ++ DP   +   LV +  +  +L +A +   +M    T   W  L+  
Sbjct: 272 VIGSGFEFDPQVAN--TLVAMYSKCGNLFDARKLFNTMPQTDTV-TWNGLIAG 321


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/700 (37%), Positives = 413/700 (59%), Gaps = 21/700 (3%)

Query: 155 GLVTNAYTFVAALQACED----SSFETLGMEIHAATVKSG--QNLQVYVANALIAMYARC 208
           G    ++T V+ L+A       ++   LG E HA  +K+G     Q +  NAL++MYAR 
Sbjct: 5   GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 64

Query: 209 GKMTEAAGVLYQLE--NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           G + +A  +         D V+WN+M++  VQ+ ++ +A+Q   ++   G +PD V   +
Sbjct: 65  GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 124

Query: 267 AVSASGRLGNLLNGKELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--T 323
           A+ A  RL  L  G+E+HAY IK     ++  + + L+DMYA    V    +VF  +  +
Sbjct: 125 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 184

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTK 382
            +    W  +I GYAQ     +AL LF  ++ E G       + SVL AC+  +  +  +
Sbjct: 185 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 244

Query: 383 EIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
            +HGY++++G++ +  + NA++D+Y + G  D +R +F  ++  DVVSW ++I+  V  G
Sbjct: 245 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 304

Query: 442 LANEALELFYLMN---EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
              +A +L   M    E  V  ++ITL++ L   + L+   +GKE++G+ +R   + + +
Sbjct: 305 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVA 364

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           V S+LVDMYA+CG L ++  VF+ +  ++ I W  +I A G+HG G  A  LF +M A  
Sbjct: 365 VGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASG 424

Query: 559 FA-PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
            A P+ +TF+A L ACSHSG+++ G +    M  D+ ++P P+  AC+VD+LGRA  L+E
Sbjct: 425 EARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDE 484

Query: 618 AYQFVRSMQI-EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           AY  V SM+  E     W  +LGACR+H N  LGEI  ++LLEL+P    +YVL+ N+++
Sbjct: 485 AYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYS 544

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI-T 735
           A+ +W    +VR RMR  G+ K PG SWIE+   IH F+A + +H  S+E++  +  +  
Sbjct: 545 AAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWG 604

Query: 736 EKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVC 795
           E + R  GY   T  VLH++++ +K  +L  HSE+LAIA+G+L++  G+ IR+ KNLRVC
Sbjct: 605 EMVAR--GYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVC 662

Query: 796 VDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            DCH   K +S++ GRE+V+RD  RFHHF  G CSCGDYW
Sbjct: 663 NDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 223/454 (49%), Gaps = 23/454 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVS--QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY + G V DA++LF   +  +  V TWN M+   V +G     ++T   M  LG+  D 
Sbjct: 60  MYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 119

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            TF   + AC+ L+ LD G ++H  V+K     +  F+ ++LV MYA      KARQ+FD
Sbjct: 120 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 179

Query: 118 RMGEK-EDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSF 175
            + +  + + +WN++I  Y+ +G   EAL LF  M+   G V    T  + L AC  S  
Sbjct: 180 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 239

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                 +H   VK G     +V NAL+ MYAR GK   A  +   ++  D VSWN+++TG
Sbjct: 240 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 299

Query: 236 FVQNDLYCKAMQFFRELQG---AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
            V       A Q  RE+Q     G  P+ +  +  +     L     GKE+H YA++   
Sbjct: 300 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 359

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            +D+ +G+ L+DMYAKC C+     VF ++  ++ I+W  +I  Y  +    +A  LF  
Sbjct: 360 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 419

Query: 353 VQLEG-LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVD 404
           +   G    + +   + L ACS       GL+     +  HG    +   D  IL  +VD
Sbjct: 420 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGV---EPTPD--ILACVVD 474

Query: 405 VYGKCGNIDYSRNVFESIES--KDVVSWTSMISS 436
           + G+ G +D +  +  S+E+  + V +W++M+ +
Sbjct: 475 ILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGA 508



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 168/355 (47%), Gaps = 12/355 (3%)

Query: 1   MYGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVD 57
           MY     V  A Q+FD V  S + +  WNAM+  Y   G     L  ++RM    G    
Sbjct: 164 MYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPC 223

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             T   V+ ACA  +       +HG V+K G     F+ N+L+ MYA+      AR++F 
Sbjct: 224 ETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFA 283

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV---GLVTNAYTFVAALQACEDSS 174
            M +  DVV WN++I+     G   +A  L REMQ++   G+V NA T +  L  C   +
Sbjct: 284 -MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILA 342

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G EIH   V+   +  V V +AL+ MYA+CG +  +  V  +L  +++++WN ++ 
Sbjct: 343 APARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIM 402

Query: 235 GFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKEL-HAYAIKQGF 292
            +  + L  +A   F  +  +G+ +P++V  + A++A    G +  G +L HA     G 
Sbjct: 403 AYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGV 462

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA--QDFISWTTII-AGYAQNNCHL 344
                I   ++D+  +   ++    +   M A  Q   +W+T++ A     N HL
Sbjct: 463 EPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHL 517


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/674 (35%), Positives = 399/674 (59%), Gaps = 34/674 (5%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           +Y  N L++ Y++   + E   V + +  +D VSWNS+++ +       ++++ +  +  
Sbjct: 75  LYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLY 134

Query: 255 AGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK----- 308
            G    +++     +  + + G +  G ++H + +K GF S + +G+ L+DMY+K     
Sbjct: 135 NGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVF 194

Query: 309 --------------------------CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
                                     C  +    ++FY M  +D ISWT +IAG+ QN  
Sbjct: 195 CARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGL 254

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NA 401
             +A++LFR ++LE L+ D    GSVL AC G+  + + K++H YIIR    D + + +A
Sbjct: 255 DREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSA 314

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           +VD+Y KC +I  +  VF  +  K+VVSWT+M+  Y  NG + EA+++F  M    +E D
Sbjct: 315 LVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPD 374

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
             TL S +S+ ++L+ L++G + +   +  G     +V+++LV +Y +CG+++ ++++F+
Sbjct: 375 DFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFS 434

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +   D + WT++++     G+    + LF  M A  F PD +TF+ +L ACS +GL+ +
Sbjct: 435 EMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQK 494

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G +  E M  ++++ P  +HY C++DL  RA  LEEA +F+  M   P A  W +LL +C
Sbjct: 495 GNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSC 554

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           R H N E+G+  A+ LL+L+P N  +Y+L+S+++AA  KW++V  +R  MR  GL+K PG
Sbjct: 555 RFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPG 614

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            SWI+  N++H F A D+S+  SD+IY +L ++  K+ +E GYV     VLH+V++ EK+
Sbjct: 615 CSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQE-GYVPDMNSVLHDVDDSEKI 673

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
           +ML  HSE+LAIA+G++    G  IR+ KNLRVC DCH+  K +S++  RE++VRDA RF
Sbjct: 674 KMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARF 733

Query: 822 HHFEAGVCSCGDYW 835
           H F+ G CSCGD+W
Sbjct: 734 HLFKDGRCSCGDFW 747



 Score =  246 bits (627), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 162/569 (28%), Positives = 281/569 (49%), Gaps = 84/569 (14%)

Query: 68  CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK----- 122
           C +LK      KIH  ++K   +   F++N+LV+ YAK      AR++FD+M ++     
Sbjct: 19  CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78

Query: 123 -------------------------EDVVLWNSIISAYSASGQCLEALGLFREM------ 151
                                     D+V WNS+ISAY+  G  L+++  +  M      
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 152 --QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA--- 206
              R+ L T     +A+ Q C       LG+++H   VK G    V+V + L+ MY+   
Sbjct: 139 NLNRIALST--MLILASKQGCVH-----LGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTG 191

Query: 207 ----------------------------RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
                                       RC ++ ++  + Y ++ KDS+SW +M+ GF Q
Sbjct: 192 LVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQ 251

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N L  +A+  FRE++    + DQ    + ++A G +  L  GK++HAY I+  +  ++ +
Sbjct: 252 NGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFV 311

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G+ L+DMY KC  +     VF +M  ++ +SWT ++ GY QN    +A+++F  +Q  G+
Sbjct: 312 GSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGI 371

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
           + D   +GSV+ +C+ L  + +  + H   +  GL S + + NA+V +YGKCG+I+ S  
Sbjct: 372 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHR 431

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  +   D VSWT+++S Y   G ANE L LF  M     + D +T +  LSA S   +
Sbjct: 432 LFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGL 491

Query: 478 LKKGKELNGFIIRKG--FNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSM 534
           ++KG ++   +I++     +E    + ++D+++R G L+ A K  N +  + D I W S+
Sbjct: 492 VQKGNQIFESMIKEHRIIPIEDHY-TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASL 550

Query: 535 INANGLHGR---GKVAIDLFYKMEAESFA 560
           +++   H     GK A +   K+E  + A
Sbjct: 551 LSSCRFHRNMEIGKWAAESLLKLEPHNTA 579



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 189/384 (49%), Gaps = 44/384 (11%)

Query: 242 YCKAMQFFRELQG-------AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
           YC+ ++  R+ +        A + P+     N VSA  +   +   + +      Q    
Sbjct: 18  YCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRV----FDQMPQR 73

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           +L   NTL+  Y+K  C+  M RVF+ M  +D +SW ++I+ YA     L++++ +  + 
Sbjct: 74  NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133

Query: 355 LEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGK---- 408
             G  + + + + ++L+  S   C+    ++HG++++ G    V + + +VD+Y K    
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193

Query: 409 ---------------------------CGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
                                      C  I+ SR +F  ++ KD +SWT+MI+ +  NG
Sbjct: 194 FCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNG 253

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
           L  EA++LF  M   N+E D  T  S L+A   +  L++GK+++ +IIR  +     V S
Sbjct: 254 LDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGS 313

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           +LVDMY +C ++  A  VF  +  K+++ WT+M+   G +G  + A+ +F  M+     P
Sbjct: 314 ALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEP 373

Query: 562 DHITFLALLYACSHSGLINEGKKF 585
           D  T  +++ +C++   + EG +F
Sbjct: 374 DDFTLGSVISSCANLASLEEGAQF 397



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 172/334 (51%), Gaps = 3/334 (0%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           +C  + D+ QLF  + ++   +W AM+  +  NG     ++ +  MR+  + +D +TF  
Sbjct: 220 RCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGS 279

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           V+ AC  +  L  G ++H  +++  Y    F+ ++LV MY KC   + A  +F +M  K 
Sbjct: 280 VLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCK- 338

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +VV W +++  Y  +G   EA+ +F +MQ  G+  + +T  + + +C + +    G + H
Sbjct: 339 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFH 398

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              + SG    + V+NAL+ +Y +CG + ++  +  ++   D VSW ++++G+ Q     
Sbjct: 399 CRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKAN 458

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           + ++ F  +   G KPD+V  +  +SA  R G +  G ++    IK+  +  ++   T M
Sbjct: 459 ETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCM 518

Query: 304 -DMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIA 335
            D++++   +    +   +M  + D I W ++++
Sbjct: 519 IDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 120/236 (50%), Gaps = 3/236 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC S+  AE +F K++ + V +W AML  Y  NG     ++ +  M+  GI  D FT
Sbjct: 318 MYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFT 377

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +CA L  L+ GA+ H   L  G  S   + N+LV +Y KC     + +LF  M 
Sbjct: 378 LGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMS 437

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             ++V  W +++S Y+  G+  E L LF  M   G   +  TF+  L AC  +     G 
Sbjct: 438 YVDEVS-WTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGN 496

Query: 181 EIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
           +I  + +K  + + +      +I +++R G++ EA   + ++  + D++ W S+L+
Sbjct: 497 QIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/738 (35%), Positives = 419/738 (56%), Gaps = 7/738 (0%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N++++M  +  +   A ++F +M E+ DV  WN ++  Y   G   EAL L+  M   G+
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPER-DVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YTF   L+ C       +G E+HA  ++ G   +V V NAL+ MYA+CG +  A  
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARK 253

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V   +   D +SWN+M+ G  +N      ++ F  +     +P+ +   +   ASG L  
Sbjct: 254 VFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSE 313

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           +   KE+H +A+K+GF  D+   N+L+ MY     +   G++F +M  +D +SWT +I+G
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSD 395
           Y +N    KALE++  ++L  +  D + I S L AC+ L  +    ++H     KG +  
Sbjct: 374 YEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           +V+ NA++++Y K  +ID +  VF+ +  KDVVSW+SMI+ +  N  + EAL  F  M  
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-L 492

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
            +V+ +S+T ++ALSA ++   L+ GKE++ +++R G   EG V ++L+D+Y +CG    
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A   F+    KD++ W  M++    HG G +A+ LF +M      PD +TF+ALL ACS 
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           +G++ +G +   +M   + + P  +HYAC+VDLL R   L EAY  +  M I+P A VW 
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL  CR+H + ELGE+ AK +LEL+P +   +VL+ +++  + KW  V +VR  MR  G
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           L++  G SW+E+    H+F+  D+SH +  EI   L  I E++ +  G+          V
Sbjct: 733 LEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERM-KACGFAPVESLEDKEV 791

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
            E++   +L GHSERLA+A+G++ +T G+ I +TKN   C  CH   K +S +  RE+ V
Sbjct: 792 SEDD---ILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITV 848

Query: 816 RDANRFHHFEAGVCSCGD 833
           RD  + H F+ G CSCGD
Sbjct: 849 RDTKQLHCFKDGDCSCGD 866



 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 184/577 (31%), Positives = 305/577 (52%), Gaps = 15/577 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M  + G +  A ++F K+ +R VF+WN M+G Y   G     L+ Y RM   G+  D +T
Sbjct: 140 MLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYT 199

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV++ C  + D   G ++H  VL+ G+     ++N+LV MYAKC D   AR++FD M 
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D + WN++I+ +  + +C   L LF  M    +  N  T  +   A    S      
Sbjct: 260 -VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAK 318

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   VK G  + V   N+LI MY   G+M +A  +  ++E KD++SW +M++G+ +N 
Sbjct: 319 EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA++ +  ++     PD V   +A++A   LG L  G +LH  A  +GF+  + + N
Sbjct: 379 FPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++MYAK   ++    VF  M  +D +SW+++IAG+  N+   +AL  FR + L  +  
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKP 497

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           + +   + L AC+    +   KEIH Y++R G+ S+  + NA++D+Y KCG   Y+   F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
                KDVVSW  M+S +V +GL + AL LF  M E     D +T V+ L A S   ++ 
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVI 617

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           +G EL   +  K F++  ++   + +VD+ +R G L  A  + N +  K D  +W +++N
Sbjct: 618 QGWELFHMMTEK-FSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLN 676

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALL 570
              +H     G++A  +  ++E     P+ + +  LL
Sbjct: 677 GCRIHRHVELGELAAKVILELE-----PNDVAYHVLL 708



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 242/465 (52%), Gaps = 6/465 (1%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           ++ + A  + GQ  +AL L           +   +VA  + CE       GM   A    
Sbjct: 68  SAALRALCSHGQLAQALWLLESSPEP---PDEGAYVALFRLCEWRRAVDAGMRACARADA 124

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
              +  + + NA+++M  R G++  A  V  ++  +D  SWN M+ G+ +     +A+  
Sbjct: 125 EHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDL 184

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           +  +  AG +PD       +   G + +   G+E+HA+ ++ GF  ++ + N L+ MYAK
Sbjct: 185 YYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAK 244

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  +    +VF  M   D ISW  +IAG+ +N+     LELF T+    +  ++M I SV
Sbjct: 245 CGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSV 304

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
            +A   L  +   KE+HG+ +++G + D+   N+++ +Y   G +  +  +F  +E+KD 
Sbjct: 305 TVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDA 364

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           +SWT+MIS Y  NG  ++ALE++ LM   NV  D +T+ SAL+A + L  L  G +L+  
Sbjct: 365 MSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHEL 424

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
              KGF     VA++L++MYA+   +D A +VF  +  KD++ W+SMI     + R   A
Sbjct: 425 AQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEA 484

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRC 591
           +  F  M      P+ +TF+A L AC+ +G +  GK+    ++RC
Sbjct: 485 LYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 528


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 243/614 (39%), Positives = 367/614 (59%), Gaps = 3/614 (0%)

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRE-LQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           + + S+N ++  F++      A+  F E L      PDQ    N V +  R+ +L  G+ 
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           + AYA K+GF+ D  + N+L+ MYA C  V     +F+ +  +  I+W  +IAGY +N  
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNA 401
             + +E+F+ +       D + + SV  AC  L   +  + I  Y   KG L    +  A
Sbjct: 253 WKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATA 312

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           +VD+Y KCG +D +R +F+ + S+DVV+W++MIS Y  +    EAL +F  M    V  +
Sbjct: 313 LVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPN 372

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
            +T+VS LSA + L  L+ GK ++ +I RK   L   + ++LVD YA+CG +  A K F 
Sbjct: 373 DVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFE 432

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  ++   WT++I     +GR + A++LF  M   +  P  +TF+ +L ACSH  L+ E
Sbjct: 433 SMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEE 492

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G++    M  DY + P  EHY C+VDLLGRA  ++EAYQF+R+M IEP A VW ALL AC
Sbjct: 493 GRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSAC 552

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
            VH N E+GE   K+++ LDP + GNY+L+SN +A+  +WK+   VR  M+  G++K PG
Sbjct: 553 TVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPG 612

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            S IE+   I  F A D  H +  EIY+K+ E+ E + +  GY+  T     +V+E EK 
Sbjct: 613 CSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENI-KMVGYIPNTADARLDVDEYEKQ 671

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             +  HSE+LAIA+G++KS  G+ IR++KNLRVC+DCHS  KL+S+++ RE++VRD NRF
Sbjct: 672 VSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRF 731

Query: 822 HHFEAGVCSCGDYW 835
           HHF+ G+CSC DYW
Sbjct: 732 HHFKDGLCSCNDYW 745



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 248/524 (47%), Gaps = 53/524 (10%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFTFPCVIKACAMLKDLDCG 77
             R+  ++N ++ +++  G P   L  +  M     +S D  T    +K+C+ + DL  G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
             +     K G+    F++NSL+ MYA C D   A  LF  +  K  V+ WN++I+ Y  
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVK-GVIAWNAMIAGYVK 249

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
           +G   E + +F+ M  V    +  T ++   AC       LG  I     + G      +
Sbjct: 250 NGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNL 309

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
           A AL+ MYA+CG++ +A  +  ++ ++D V+W++M++G+ Q+D   +A+  F E+QG   
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEV 369

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
            P+ V  V+ +SA   LG L  GK +H+Y  ++     + +G  L+D YAKC C+    +
Sbjct: 370 NPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVK 429

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA-DVMIIGSVLMACSGLK 376
            F  M  ++  +WT +I G A N    +ALELF ++    ++  DV  IG VL+ACS   
Sbjct: 430 AFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIG-VLLACS--- 485

Query: 377 CMSQTKEIHGYIIRKGLSDLVILNA-------------IVDVYGKCGNID----YSRNVF 419
                   HG ++ +G      +               +VD+ G+ G ID    + RN+ 
Sbjct: 486 --------HGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNM- 536

Query: 420 ESIESKDVVSWTSMISS-YVHNG--LANEALELFYLMNEANVESDSITLVSALSAASSLS 476
             IE   VV W +++S+  VH    +  EAL+    ++  +  S +  L+S   A+    
Sbjct: 537 -PIEPNAVV-WRALLSACTVHKNVEIGEEALKQIVPLDPCH--SGNYILLSNTYASV--- 589

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
               G+  N  ++RK    +G      V+    C  +++   +F
Sbjct: 590 ----GQWKNAAMVRKEMKEKG------VEKIPGCSLIELEGTIF 623



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 2/292 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG V+ A  LF  V  + V  WNAM+  YV NG+   V+E +  M  +    D  T
Sbjct: 215 MYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVT 274

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V  AC  L D + G  I     + G   +  +  +LV MYAKC +  KAR+LFDRM 
Sbjct: 275 LLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMH 334

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV W+++IS Y+ S +C EAL +F EMQ   +  N  T V+ L AC        G 
Sbjct: 335 SR-DVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGK 393

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H+   +    L V +  AL+  YA+CG + +A      +  +++ +W +++ G   N 
Sbjct: 394 WVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNG 453

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
              +A++ F  +  A  +P  V  +  + A    G L+     H  ++ Q +
Sbjct: 454 RSREALELFSSMLEANIEPTDVTFIGVLLACSH-GCLVEEGRRHFTSMTQDY 504


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/639 (38%), Positives = 373/639 (58%), Gaps = 33/639 (5%)

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           +A  L+  Y+  G+ + A  +  +   K+ V +N M+  +V N+LY +A+  F+ +    
Sbjct: 73  LAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCA 132

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             PD       + A   L NL  G ++H   +K G  ++L IGN L+ MY KC C+    
Sbjct: 133 FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREAR 192

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           +V  QM  +D +SW +++AGYAQ+     ALE+ + +    L+ D   + S+    S + 
Sbjct: 193 KVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL----SPVV 248

Query: 377 CMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           C                            Y    N+ Y  N+FE +  K+++SW  MI+ 
Sbjct: 249 C----------------------------YTSLENVQYIHNMFERMTKKNLISWNVMIAI 280

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           YV+N + NEA+ LF  M E  ++ D++T+ S L A   LS L  G+ L+ +I +      
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPN 340

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             + ++L+DMYA+CG L+ A  VF+ ++ +D++ WTSM++A G  G+G  A+ LF KM  
Sbjct: 341 LLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLD 400

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
               PD I F+++L ACSH+GL+++G+ +  +M   Y + P  EH+AC+VDL GRA  +E
Sbjct: 401 SGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVE 460

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EAY F++ M +EP   VW ALL ACRVHS  ++G + A  L +L P   G YVL+SN++A
Sbjct: 461 EAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYA 520

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
            +  WKDV  VR  M+  G+KK PG S +E+  ++H+F+A D+ H ++  IY +L  +  
Sbjct: 521 KAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVG 580

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           K+ +E GY+ QT+  LH+VE E+K   L  HSE+LAI + +L + +G+ IRITKNLRVC 
Sbjct: 581 KM-KELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCG 639

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCH   KL+S++  R ++VRD NRFHHF  G+CSCGDYW
Sbjct: 640 DCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 224/444 (50%), Gaps = 49/444 (11%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G    A  +FD+  ++ V  +N M+ +YV+N   +  L  +  M     + D +TF
Sbjct: 81  YSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTF 140

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           PCV+KAC+ L +L  G ++H  ++K G D+  FI N+LVAMY KC   R+AR++ D+M  
Sbjct: 141 PCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPY 200

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV WNS+++ Y+ SGQ  +AL + +EM  + L  +A T  +       +S E     
Sbjct: 201 R-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLE----- 254

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
                     N+Q Y+ N    M+ R  K             K+ +SWN M+  +V N +
Sbjct: 255 ----------NVQ-YIHN----MFERMTK-------------KNLISWNVMIAIYVNNSM 286

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F +++  G KPD V   + + A G L  L  G+ LH Y  K     +L + N 
Sbjct: 287 PNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENA 346

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC C+     VF +M  +D +SWT++++ Y ++     A+ LF  +   G + D
Sbjct: 347 LLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPD 406

Query: 362 VMIIGSVLMACSGLKCMSQTK-------EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            +   SVL ACS    + Q +       E +G + R     +     +VD++G+ G ++ 
Sbjct: 407 SIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPR-----IEHFACMVDLFGRAGEVEE 461

Query: 415 SRNVFE--SIESKDVVSWTSMISS 436
           + +  +   +E  + V W +++S+
Sbjct: 462 AYSFIKQMPMEPNERV-WGALLSA 484



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 35/309 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + +A ++ D++  R V +WN+M+  Y  +G+    LE    M  L ++ DA T
Sbjct: 181 MYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGT 240

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +                                 S V  Y    + +    +F+RM 
Sbjct: 241 MASL---------------------------------SPVVCYTSLENVQYIHNMFERM- 266

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K++++ WN +I+ Y  +    EA+ LF +M+  G+  +A T  + L AC D S   LG 
Sbjct: 267 TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGR 326

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    K      + + NAL+ MYA+CG + EA  V  ++  +D VSW SM++ + ++ 
Sbjct: 327 RLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSG 386

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIG 299
               A+  F ++  +GQ PD +  V+ +SA    G L  G+       +Q G V  ++  
Sbjct: 387 QGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHF 446

Query: 300 NTLMDMYAK 308
             ++D++ +
Sbjct: 447 ACMVDLFGR 455



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A  +FDK+  R V +W +M+ AY  +G+    +  +++M   G + D+  
Sbjct: 350 MYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIA 409

Query: 61  FPCVIKACAMLKDLDCG-------AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           F  V+ AC+    LD G        + +G+V +  + +       +V ++ +  +  +A 
Sbjct: 410 FVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFAC------MVDLFGRAGEVEEAY 463

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
               +M  + +  +W +++SA
Sbjct: 464 SFIKQMPMEPNERVWGALLSA 484


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/763 (34%), Positives = 424/763 (55%), Gaps = 31/763 (4%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG V DA  +FD +S R V  WNAM+  YV  G     +     M    +  ++ T 
Sbjct: 105 YCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTM 164

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             ++ AC    +L  G  +HG  L+ G +DS   +  +L+  Y + +D R    LFD M 
Sbjct: 165 VALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLR-FDMRVLPLLFDLMV 223

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + ++V WN++IS Y   G   +AL LF +M    +  +  T + A+QAC +     LG 
Sbjct: 224 VR-NIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGK 282

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K      +Y+ NAL+ MY+  G +  +  +   + N+D+  WNSM++ +    
Sbjct: 283 QIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFG 342

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN-LLNGKELHAYAIKQGFVSDLQIG 299
            + +AM  F  +Q  G K D+   V  +S    L + LL GK LHA+ IK G   D  +G
Sbjct: 343 CHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLG 402

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+ MY +  CV  + ++F +M   D ISW T+I   A+N    +A ELF  ++   + 
Sbjct: 403 NALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIK 462

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            +   I S+L AC  + C+   + IHGY+++  +  +  +  A+ D+Y  CG+   +R++
Sbjct: 463 PNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDL 522

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           FE    +D++SW +MI                        E +S+T+++ LS+ + L+ L
Sbjct: 523 FEGCPDRDLISWNAMI---------------------XKAEPNSVTIINVLSSFTHLATL 561

Query: 479 KKGKELNGFIIRKGFNL--EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            +G+ L+ ++ R+GF+L  + S+A++ + MYARCG+L  A  +F  +  +++I W +MI 
Sbjct: 562 PQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIA 621

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
             G++GRG  A+  F +M  + F P+ +TF+++L ACSHSG I  G +    M  D+ + 
Sbjct: 622 GYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVT 681

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P   HY+C+VDLL R   ++EA +F+ SM IEP A VW ALL +CR +S+ +  + + +K
Sbjct: 682 PELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEK 741

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L +L+P N GNYVL+SNV+A +  W +V ++R  ++  GL+K PG SWI + N++H F A
Sbjct: 742 LDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSA 801

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
            D+SH +SD+IY KL+ +   + RE GY    ++V H  EE++
Sbjct: 802 GDRSHPQSDKIYAKLSILLSSM-RETGYDPDLRWVFH--EEDD 841



 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 170/566 (30%), Positives = 292/566 (51%), Gaps = 32/566 (5%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           WN+++    +      +L  Y++M  LG+  +  T P V+KACA    ++ G  IH  + 
Sbjct: 28  WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87

Query: 86  KCGYDSTDFIV--NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE 143
             G D  D +    ++V  Y KC     AR +FD M ++ DVVLWN+++  Y   G   E
Sbjct: 88  --GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDR-DVVLWNAMVYGYVGWGCYEE 144

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALI 202
           A+ L REM R  L  N+ T VA L ACE +S   LG  +H   +++G  +   +VA ALI
Sbjct: 145 AMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALI 204

Query: 203 AMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
             Y R         +L+ L   ++ VSWN+M++G+     Y KA++ F ++     K D 
Sbjct: 205 GFYLRFD--MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDC 262

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
           V  + AV A   LG+L  GK++H  AIK  FV DL I N L++MY+    +    ++F  
Sbjct: 263 VTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFES 322

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC-MSQ 380
           +  +D   W ++I+ YA   CH +A++LF  +Q EG+  D   +  +L  C  L   + +
Sbjct: 323 VPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLK 382

Query: 381 TKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
            K +H ++I+ G+  D  + NA++ +Y +   ++  + +F+ ++  D++SW +MI +   
Sbjct: 383 GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALAR 442

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           N L  +A ELF  M E+ ++ +S T++S L+A   ++ L  G+ ++G++++    +   +
Sbjct: 443 NTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPL 502

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            ++L DMY  CG    A  +F     +DLI W +MI                   +AE  
Sbjct: 503 RTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI------------------XKAE-- 542

Query: 560 APDHITFLALLYACSHSGLINEGKKF 585
            P+ +T + +L + +H   + +G+  
Sbjct: 543 -PNSVTIINVLSSFTHLATLPQGQSL 567



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 250/542 (46%), Gaps = 32/542 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   GS+  + QLF+ V  R    WN+M+ AY + G     ++ + RM+  G+  D  T
Sbjct: 306 MYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERT 365

Query: 61  FPCVIKACAMLKD-LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              ++  C  L   L  G  +H  V+K G      + N+L++MY +       +++FDRM
Sbjct: 366 VVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRM 425

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +  D++ WN++I A + +    +A  LF  M+   +  N+YT ++ L ACED +    G
Sbjct: 426 -KGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFG 484

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH   +K    +   +  AL  MY  CG    A  +     ++D +SWN+M+      
Sbjct: 485 RSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIX----- 539

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV--SDLQ 297
               KA            +P+ V  +N +S+   L  L  G+ LHAY  ++GF    DL 
Sbjct: 540 ----KA------------EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLS 583

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N  + MYA+C  +     +F  +  ++ ISW  +IAGY  N     A+  F  +  +G
Sbjct: 584 LANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDG 643

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYS 415
              + +   SVL ACS    +    ++   +++      +LV  + IVD+  + G ID +
Sbjct: 644 FRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEA 703

Query: 416 RNVFESIE-SKDVVSWTSMISSYVHNGLANEALELFYLMNEAN-VESDSITLVSALSAAS 473
           R   +S+    D   W +++SS      A +A  +F  +++   + + +  L+S + A +
Sbjct: 704 REFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATA 763

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC-GALDIANKVFNCVQTKDLILWT 532
            L +  + + +  ++  KG      ++  +V     C  A D ++   + +  K  IL +
Sbjct: 764 GLWL--EVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLS 821

Query: 533 SM 534
           SM
Sbjct: 822 SM 823



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 79/162 (48%)

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           I+ KD   W S+I    +       L  +  M    V  ++ TL   L A ++ + +++G
Sbjct: 20  IQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERG 79

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           K ++  I       +  V +++VD Y +CG ++ A  VF+ +  +D++LW +M+      
Sbjct: 80  KSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGW 139

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           G  + A+ L  +M  E+  P+  T +ALL AC  +  +  G+
Sbjct: 140 GCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGR 181


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/639 (38%), Positives = 373/639 (58%), Gaps = 33/639 (5%)

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           +A  L+  Y+  G+ + A  +  +   K+ V +N M+  +V N+LY +A+  F+ +    
Sbjct: 73  LAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCA 132

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             PD       + A   L NL  G ++H   +K G  ++L IGN L+ MY KC C+    
Sbjct: 133 FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREAR 192

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           +V  QM  +D +SW +++AGYAQ+     ALE+ + +    L+ D   + S+    S + 
Sbjct: 193 KVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL----SPVV 248

Query: 377 CMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           C                            Y    N+ Y  N+FE +  K+++SW  MI+ 
Sbjct: 249 C----------------------------YTSLENVQYIHNMFERMTKKNLISWNVMIAI 280

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           YV+N + NEA+ LF  M E  ++ D++T+ S L A   LS L  G+ L+ +I +      
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPN 340

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             + ++L+DMYA+CG L+ A  VF+ ++ +D++ WTSM++A G  G+G  A+ LF KM  
Sbjct: 341 LLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLD 400

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
               PD I F+++L ACSH+GL+++G+ +  +M   Y + P  EH+AC+VDL GRA  +E
Sbjct: 401 SGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVE 460

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EAY F++ M +EP   VW ALL ACRVHS  ++G + A  L +L P   G YVL+SN++A
Sbjct: 461 EAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYA 520

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
            +  WKDV  VR  M+  G+KK PG S +E+  ++H+F+A D+ H ++  IY +L  +  
Sbjct: 521 KAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVG 580

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           K+ +E GY+ QT+  LH+VE E+K   L  HSE+LAI + +L + +G+ IRITKNLRVC 
Sbjct: 581 KM-KELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCG 639

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCH   KL+S++  R ++VRD NRFHHF  G+CSCGDYW
Sbjct: 640 DCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 224/444 (50%), Gaps = 49/444 (11%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G    A  +FD+  ++ V  +N M+ +YV+N   +  L  +  M     + D +TF
Sbjct: 81  YSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTF 140

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           PCV+KAC+ L +L  G ++H  ++K G D+  FI N+LVAMY KC   R+AR++ D+M  
Sbjct: 141 PCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPY 200

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV WNS+++ Y+ SGQ  +AL + +EM  + L  +A T  +       +S E     
Sbjct: 201 R-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLE----- 254

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
                     N+Q Y+ N    M+ R  K             K+ +SWN M+  +V N +
Sbjct: 255 ----------NVQ-YIHN----MFERMTK-------------KNLISWNVMIAIYVNNSM 286

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F +++  G KPD V   + + A G L  L  G+ LH Y  K     +L + N 
Sbjct: 287 PNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENA 346

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC C+     VF +M  +D +SWT++++ Y ++     A+ LF  +   G + D
Sbjct: 347 LLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPD 406

Query: 362 VMIIGSVLMACSGLKCMSQTK-------EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            +   SVL ACS    + Q +       E +G + R     +     +VD++G+ G ++ 
Sbjct: 407 SIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPR-----IEHFACMVDLFGRAGEVEE 461

Query: 415 SRNVFE--SIESKDVVSWTSMISS 436
           + +  +   +E  + V W +++S+
Sbjct: 462 AYSFIKQMPMEPNERV-WGALLSA 484



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 35/309 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + +A ++ D++  R V +WN+M+  Y  +G+    LE    M  L ++ DA T
Sbjct: 181 MYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGT 240

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +                                 S V  Y    + +    +F+RM 
Sbjct: 241 MASL---------------------------------SPVVCYTSLENVQYIHNMFERM- 266

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K++++ WN +I+ Y  +    EA+ LF +M+  G+  +A T  + L AC D S   LG 
Sbjct: 267 TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGR 326

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    K      + + NAL+ MYA+CG + EA  V  ++  +D VSW SM++ + ++ 
Sbjct: 327 RLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSG 386

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIG 299
               A+  F ++  +GQ PD +  V+ +SA    G L  G+       +Q G V  ++  
Sbjct: 387 QGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHF 446

Query: 300 NTLMDMYAK 308
             ++D++ +
Sbjct: 447 ACMVDLFGR 455



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A  +FDK+  R V +W +M+ AY  +G+    +  +++M   G + D+  
Sbjct: 350 MYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIA 409

Query: 61  FPCVIKACAMLKDLDCG-------AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           F  V+ AC+    LD G        + +G+V +  + +       +V ++ +  +  +A 
Sbjct: 410 FVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFAC------MVDLFGRAGEVEEAY 463

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
               +M  + +  +W +++SA
Sbjct: 464 SFIKQMPMEPNERVWGALLSA 484


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/656 (38%), Positives = 376/656 (57%), Gaps = 12/656 (1%)

Query: 189  SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            SG  L +  +N LI MY +C +   A  V   +  ++ VSW ++++G V N     ++  
Sbjct: 398  SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL 457

Query: 249  FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
            F E+   G  P++      + A G L  L  G ++H + +K GF   +++GN+L+DMY+K
Sbjct: 458  FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517

Query: 309  CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD--ADVMIIG 366
            C  +N   +VF  M  +  ISW  +IAGY       +AL  F  +Q   +    D   + 
Sbjct: 518  CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577

Query: 367  SVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
            S+L ACS    +   K+IHG+++R G    S   I  ++VD+Y KCGN+  +R  F+ I+
Sbjct: 578  SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637

Query: 424  SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
             K ++SW+S+I  Y   G   EA+ LF  + E + + DS  L S +   +  ++L++GK+
Sbjct: 638  EKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQ 697

Query: 484  LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
            +   +++    LE SV++SLVDMY +CG +D A K F  +Q KD+I WT MI   G HG 
Sbjct: 698  MQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGL 757

Query: 544  GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
            GK A+ +F KM   +  PD + +LA+L ACSHSG+I EG++    +     + P  EHYA
Sbjct: 758  GKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYA 817

Query: 604  CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
            C+VDLLGRA  L+EA   V +M I+P   +W  LL  CRVH + ELG+ V K LL +D  
Sbjct: 818  CVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGK 877

Query: 664  NPGNYVLISNVFAASRKWKDVEQVRMRMRGS--GLKKTPGSSWIEIGNKIHSFIARDKSH 721
            NP NYV++SN++  +  W   EQ   R  GS  GL+K  G SW+EI  ++H F + + SH
Sbjct: 878  NPANYVMMSNLYGQAGYWN--EQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSH 935

Query: 722  SESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK-- 779
              +  I + L E+  +L  E GYV   +  LH++++E K + L  HSE+LAI   +    
Sbjct: 936  PLTLVIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGG 995

Query: 780  -STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
             + +G  IR+ KNLRVCVDCH F K +S++     VVRDA RFH FE G CSCGDY
Sbjct: 996  LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 265/496 (53%), Gaps = 17/496 (3%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N L+ MY KC +   A ++FD M E+ +VV W +++S +  +G    +L LF EM R G+
Sbjct: 408 NYLIDMYCKCREQLIAYKVFDSMPER-NVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGI 466

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             N +TF   L+AC   +    G++IH   +K G  + V V N+L+ MY++CG++ EA  
Sbjct: 467 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEK 526

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA--GQKPDQVCTVNAVSASGRL 274
           V   +  +  +SWN+M+ G+V      +A+  F  +Q A   ++PD+    + + A    
Sbjct: 527 VFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSST 586

Query: 275 GNLLNGKELHAYAIKQGF--VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           G +  GK++H + ++ GF   S   I  +L+D+Y KC  +    + F Q+  +  ISW++
Sbjct: 587 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSS 646

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-- 390
           +I GYAQ    ++A+ LF+ +Q      D  ++ S++   +    + Q K++   +++  
Sbjct: 647 LILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLP 706

Query: 391 KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
            GL +  + N++VD+Y KCG +D +   F  ++ KDV+SWT MI+ Y  +GL  +A+ +F
Sbjct: 707 SGL-ETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIF 765

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKEL-NGFIIRKGFNLEGSVASSLVDMYAR 509
             M   N+E D +  ++ LSA S   ++K+G+EL +  +  +G        + +VD+  R
Sbjct: 766 NKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGR 825

Query: 510 CGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHIT 565
            G L  A  + + +  K  + +W ++++   +HG    GK    +  +++ ++  P +  
Sbjct: 826 AGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKN--PANYV 883

Query: 566 FLALLYACSHSGLINE 581
            ++ LY    +G  NE
Sbjct: 884 MMSNLYG--QAGYWNE 897



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 229/442 (51%), Gaps = 8/442 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC   L A ++FD + +R V +W A++  +V NG+    L  ++ M   GI  + FT
Sbjct: 413 MYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFT 472

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +KAC +L  L+ G +IHG  LK G++    + NSLV MY+KC    +A ++F  M 
Sbjct: 473 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMV 532

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQ--RVGLVTNAYTFVAALQACEDSSFETL 178
            +  ++ WN++I+ Y  +G    AL  F  MQ  ++    + +T  + L+AC  +     
Sbjct: 533 GR-SLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYA 591

Query: 179 GMEIHAATVKSGQNLQ--VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           G +IH   V+SG +      +  +L+ +Y +CG +  A     Q++ K  +SW+S++ G+
Sbjct: 592 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGY 651

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            Q   + +AM  F+ LQ    + D     + +        L  GK++ A  +K     + 
Sbjct: 652 AQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLET 711

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N+L+DMY KC  V+   + F +M  +D ISWT +I GY ++    KA+ +F  +   
Sbjct: 712 SVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRH 771

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNA-IVDVYGKCGNIDY 414
            ++ D +   +VL ACS    + + +E+   ++  +G+   V   A +VD+ G+ G +  
Sbjct: 772 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKE 831

Query: 415 SRNVFESIESKDVVS-WTSMIS 435
           ++++ +++  K  V  W +++S
Sbjct: 832 AKHLVDTMPIKPNVGIWQTLLS 853


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/773 (33%), Positives = 412/773 (53%), Gaps = 105/773 (13%)

Query: 167 LQACEDSSFETLGMEIHAATVKSG--------QNLQVYVA-------------------- 198
           LQ C  +   + G  IHA  VK+G         NL  Y A                    
Sbjct: 216 LQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIP 275

Query: 199 ---------NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
                    N+L+++YA+ G++ +A  V  ++ ++D+VSW  M+ G  ++  +  A++ F
Sbjct: 276 YARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTF 335

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            ++   G  P Q    N +S+   +     G+++H + +K G  S + + N+++ MY KC
Sbjct: 336 LDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKC 395

Query: 310 -------------------------CCVNYMGRV------FYQMTAQDFISWTTIIAGYA 338
                                        + GR+      F  M  +  +SW TIIAGY 
Sbjct: 396 GDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYN 455

Query: 339 QNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
           QN     AL+ F R +    ++ D   + SVL AC+ L+ +   K++H YI+R G+    
Sbjct: 456 QNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSS 515

Query: 397 VILNAIVDVYGKCGNIDYSRNV---------------------------------FESIE 423
            I+NA++  Y K G+++ +R +                                 F+ + 
Sbjct: 516 QIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMN 575

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
           ++DV++WT+MI  Y  NG  +EA+ELF  M     E +S TL + LSA +SL+ L  GK+
Sbjct: 576 NRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQ 635

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKDLILWTSMINANGLHG 542
           ++   IR       SV+++++ +YAR G++ +A +VF+ +   K+ I WTSMI A   HG
Sbjct: 636 IHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHG 695

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
            G+ A+ LF +M      PDHIT++ +L AC+H+G +++GK++ E M+ ++ + P   HY
Sbjct: 696 LGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHY 755

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
           AC+VDL  RA  L EA++F++ M + P   VW +LL ACRV  N +L E+ A KLL +DP
Sbjct: 756 ACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDP 815

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
            N G Y  ++NV++A  +W D  ++    +  G+KK  G SW  +  K+H F A D  H 
Sbjct: 816 HNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHP 875

Query: 723 ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE 782
           + D IY+K AE+ E++ ++ G+V     VLH+V++E K ++L  HSE+LAIA+G++ + E
Sbjct: 876 QRDSIYRKAAEMWEEI-KKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPE 934

Query: 783 GSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            + +RI KNLRVC DCH+  K +S+   RE++VRDA RFHHF  G CSC DYW
Sbjct: 935 KTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 162/587 (27%), Positives = 259/587 (44%), Gaps = 121/587 (20%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK------CYDFRKARQLFD 117
           +++ C    +   G  IH   +K G   + ++ N+L+A YA       C  FR+AR LFD
Sbjct: 215 LLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGC--FREARCLFD 272

Query: 118 RMG-EKEDVVLWNSIISAYSASGQCLEALGLFREMQR----------VGL---------- 156
            +   + +   WNS++S Y+ SG+  +A  +F EM            VGL          
Sbjct: 273 DIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAV 332

Query: 157 -----------------VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
                            +TN  +  AA++AC       +G ++H   VK G +  V VAN
Sbjct: 333 KTFLDMVSEGFAPSQFTLTNVLSSCAAMEAC------GVGRKVHPFVVKLGLSSCVPVAN 386

Query: 200 ALIAMYARCGKMTEAAGVLYQLE-------------------------------NKDSVS 228
           +++ MY +CG    A  V  +++                                +  VS
Sbjct: 387 SVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVS 446

Query: 229 WNSMLTGFVQNDLYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           WN+++ G+ QN L   A++FF R L  +  +PD     + +SA   L  L  GK++H+Y 
Sbjct: 447 WNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYI 506

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ-------------------------- 321
           ++ G     QI N L+  YAK   V    R+  Q                          
Sbjct: 507 LRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQ 566

Query: 322 -------MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
                  M  +D I+WT +I GY QN  + +A+ELFR++ L G + +   + +VL AC+ 
Sbjct: 567 AREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACAS 626

Query: 375 LKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTS 432
           L  +   K+IH   IR      V + NAI+ VY + G++  +R VF+ I   K+ ++WTS
Sbjct: 627 LAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTS 686

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRK 491
           MI +   +GL  +A+ LF  M    V+ D IT V  LSA +    + KGK          
Sbjct: 687 MIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEH 746

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINA 537
           G   + S  + +VD++AR G L  A++    +    D ++W S++ A
Sbjct: 747 GIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 793



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/509 (24%), Positives = 222/509 (43%), Gaps = 78/509 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G + DA  +F ++  R   +W  M+     +G     ++T+  M   G +   FT
Sbjct: 290 LYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFT 349

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM- 119
              V+ +CA ++    G K+H  V+K G  S   + NS++ MY KC D   AR +F+RM 
Sbjct: 350 LTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQ 409

Query: 120 -----------------GEKE------------DVVLWNSIISAYSASGQCLEALGLF-R 149
                            G  E             +V WN+II+ Y+ +G    AL  F R
Sbjct: 410 VRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSR 469

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
            +    +  +A+T  + L AC +     +G ++H+  +++G      + NALI+ YA+ G
Sbjct: 470 MLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSG 529

Query: 210 KMTEAAGVLYQ---------------------------------LENKDSVSWNSMLTGF 236
            +  A  ++ Q                                 + N+D ++W +M+ G+
Sbjct: 530 SVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGY 589

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            QN    +AM+ FR +   G +P+       +SA   L  L  GK++H  AI+      +
Sbjct: 590 HQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSV 649

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            + N ++ +YA+   V    RVF Q+   ++ I+WT++I   AQ+    +A+ LF  +  
Sbjct: 650 SVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVR 709

Query: 356 EGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGK 408
            G+  D +    VL AC+       G +   Q +  HG +       +     +VD++ +
Sbjct: 710 VGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIV-----PQMSHYACMVDLHAR 764

Query: 409 CGNIDYSRNVFESIE-SKDVVSWTSMISS 436
            G +  +    + +  + D V W S++++
Sbjct: 765 AGLLTEAHEFIQRMPVAPDTVVWGSLLAA 793


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/838 (31%), Positives = 449/838 (53%), Gaps = 19/838 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K   V  A  LFD++  R V +W  +L ++         L+ +  M   G   + FT
Sbjct: 58  LYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFT 117

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR-KARQLFDRM 119
               +++C  L + + G +IH   +K G +   F+  SLV  Y KC     +A +L   +
Sbjct: 118 LSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLV 177

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +  DVV W +++S+   +G+  EA  ++ +M   G+  N +TFV  L A       + G
Sbjct: 178 KDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYG 237

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +HA  +  G  L + +  A++ MY++C +M +A  V       D   W ++++GF QN
Sbjct: 238 KLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQN 297

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  FR+++ +G  P+     + ++AS  + +L  G++ H+  I  G   DL IG
Sbjct: 298 LQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIG 357

Query: 300 NTLMDMYAKCCCVNYMG-RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           N L+DMY KC  +     +VF ++T+ + + WT++IAG+A+      + +LF  +Q  G+
Sbjct: 358 NALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLE-DSFQLFAEMQAAGV 416

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             +   + ++L ACS  + +  T  +HG+II+  +  D+ + NA+VD Y   G ID + +
Sbjct: 417 RPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWS 476

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           V  ++  +D +++T + +     G    AL++   M    ++ D  +L S LSAA+ L  
Sbjct: 477 VIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGT 536

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           ++ GK+L+ + ++ GF    SV++SLV +Y++CG++  AN+ F  +   D   W  +I+ 
Sbjct: 537 METGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISG 596

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              +G    A+  F  M      PD IT L+L+ ACSH GL+  G ++   M+ +Y + P
Sbjct: 597 FSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITP 656

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             +HY CLVDLLGR   LEEA   +  M  +P + +   LL AC +H N  LGE +A++ 
Sbjct: 657 KLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRC 716

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           LELDP +P  Y+L++N++  +      E+ R  MR  GL+++PG  W+EI +++H F A 
Sbjct: 717 LELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAG 776

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           +K + +         EITEKLE        T+F     + +E     Y H E+LA+A+GV
Sbjct: 777 EKINED---------EITEKLE-----FLITEFRNRRYQYQENEDKFY-HPEQLAVAFGV 821

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L +   S IRI KN  +C  CH+F  L +++ GRE+++RD  RFH F+ G CSC D +
Sbjct: 822 LNAPSTSPIRIYKNSLICSHCHTFIMLSTQVIGREIIMRDRKRFHFFKDGQCSCRDIF 879



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 160/516 (31%), Positives = 265/516 (51%), Gaps = 12/516 (2%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G  IH  ++K G     ++ N+L+++YAK +   +AR LFD M  + DVV W +I+S+++
Sbjct: 33  GICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNR-DVVSWTTILSSHT 91

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +    +AL LF  M   G   N +T  +AL++C        GM+IH + VK G  +  +
Sbjct: 92  KTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRF 151

Query: 197 VANALIAMYARCGKMTEAAGVLYQL--ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V  +L+  Y +CG  +  A  L  L  +  D VSW +ML+  V+N  + +A + + ++  
Sbjct: 152 VGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIE 211

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
           +G  P++   V  + A      L  GK LHA+ I  G   +L +   ++DMY+KC  +  
Sbjct: 212 SGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVD 271

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             +V       D   WTT+I+G+ QN    +A+ +FR ++L GL  +     S+L A S 
Sbjct: 272 AIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSS 331

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR-NVFESIESKDVVSWTS 432
           +  +   ++ H  +I  GL  DL I NA+VD+Y KC +I  +   VF  I S +V+ WTS
Sbjct: 332 ILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTS 391

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           +I+ +    L  ++ +LF  M  A V  +S T+ + L A S    L     L+G II+  
Sbjct: 392 LIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTK 450

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM---INANGLHGRGKVAID 549
            +++ +VA++LVD YA  G +D A  V   +  +D I +T +   +N  G HG   +A+ 
Sbjct: 451 VDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHG---MALK 507

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           +   M  +    D  +  + L A +  G +  GK+ 
Sbjct: 508 VLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQL 543



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 235/479 (49%), Gaps = 9/479 (1%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           T +  L  C  +S +  G+ IH+  +K G    +Y+ N L+++YA+   +  A  +  ++
Sbjct: 17  TCLRVLSFCNSNSLKE-GICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEM 75

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
            N+D VSW ++L+   +   +  A+Q F  + G+G+ P++    +A+ +   LG    G 
Sbjct: 76  PNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGM 135

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ--DFISWTTIIAGYAQ 339
           ++H  A+K G   +  +G +L++ Y KC C +        +     D +SWTT+++   +
Sbjct: 136 QIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVE 195

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
           N    +A E++  +   G+  +      +L A S    +S  K +H ++I  G   +LV+
Sbjct: 196 NGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVL 255

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
             A+VD+Y KC  +  +  V       DV  WT++IS +  N    EA+ +F  M  + +
Sbjct: 256 KTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGL 315

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI-AN 517
             ++ T  S L+A+SS+  L  G++ +  +I  G   +  + ++LVDMY +C  +   A 
Sbjct: 316 LPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAV 375

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS- 576
           KVF  + + +++ WTS+I A     R + +  LF +M+A    P+  T  A+L ACS + 
Sbjct: 376 KVFREITSPNVMCWTSLI-AGFAEKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTR 434

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
            L+        I++    +D    +   LVD       ++EA+  + +M +  +    C
Sbjct: 435 SLVPTMMLHGHIIKTKVDIDIAVAN--ALVDTYAGVGMIDEAWSVIGTMNLRDSITYTC 491


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 282/834 (33%), Positives = 450/834 (53%), Gaps = 11/834 (1%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MY KCG ++ A ++FD ++     +WNAM+  +  N E    LE +  M    +  +  T
Sbjct: 241  MYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMT 300

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               V  A  ML ++    ++HG  +K G+       NSL+ MY        A ++F RM 
Sbjct: 301  ITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRM- 359

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            E +D + W ++IS Y  +G   +AL ++  M+   +  +  T  +AL AC       +G+
Sbjct: 360  ETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGI 419

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            ++H      G    V VANAL+ MYA+   + +A  V   +  KD VSW+SM+ GF  N 
Sbjct: 420  KLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNH 479

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                A+ +FR + G   KP+ V  + A+SA    G L +GKE+HAY ++ G  S+  + N
Sbjct: 480  RSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPN 538

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
             L+D+Y KC   +Y    F   + +D +SW  +++G+  +     AL LF  +    L  
Sbjct: 539  ALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGR 598

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
                      AC G   +    ++H     KG +  +V+ NA++++Y K  +ID +  VF
Sbjct: 599  MGACSALAACACLGR--LDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVF 656

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            + +  KDVVSW+SMI+ +  N  + +AL  F  M   +V+ +S+T ++ALSA ++   L+
Sbjct: 657  KFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALR 715

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
             GKE++ +++R G   EG V ++L+D+Y +CG    A   F+    KD++ W  M++   
Sbjct: 716  SGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFV 775

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
             HG G +A+ LF +M      PD +TF+ L+ ACS +G++ +G +        + + P  
Sbjct: 776  AHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNL 834

Query: 600  EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
            +HYAC+VDLL R   L EAY  +  M I+P A VW ALL  CR+H + ELGE+ AK +LE
Sbjct: 835  KHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILE 894

Query: 660  LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            L+P +   +VL+ +++  + KW  V +VR  MR  GL++  G SW+E+    H+F+  D+
Sbjct: 895  LEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDE 954

Query: 720  SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            SH +  EI   L  I E++ +  G+          V E++   +L GHSERLA+A+G++ 
Sbjct: 955  SHPQIKEINVVLHGIYERM-KACGFAPVESLEDKEVSEDD---ILCGHSERLAVAFGLIN 1010

Query: 780  STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
            +T G+ I +TKN   C  CH   K +S +  RE+ VRD  + H F+ G CSCGD
Sbjct: 1011 TTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGD 1064



 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 197/593 (33%), Positives = 317/593 (53%), Gaps = 7/593 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M  + G +  A ++F K+ +R VF+WN M+G Y   G     L+ Y RM   G+  D +T
Sbjct: 140 MLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYT 199

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV++ C  + D   G ++H  VL+ G+     ++N+LV MYAKC D   AR++FD M 
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D + WN++I+ +  + +C   L LF  M    +  N  T  +   A    S      
Sbjct: 260 -MTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAK 318

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   VK G  + V   N+LI MY   G+M +A  +  ++E KD++SW +M++G+ +N 
Sbjct: 319 EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA++ +  ++     PD V   +A++A   LG L  G +LH  A  +GF+  + + N
Sbjct: 379 FPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++MYAK   ++    VF  M  +D +SW+++IAG+  N+    AL  FR + L  +  
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKP 497

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           + +   + L AC+    +   KEIH Y++R G+ S+  + NA++D+Y KCG   Y+   F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
                KDVVSW  M+S +V +GL + AL LF  M   ++    +   SAL+A + L  L 
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAACACLGRLD 615

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G +L+     KGF     VA++L++MYA+   +D A +VF  +  KD++ W+SMI    
Sbjct: 616 VGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFC 675

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRC 591
            + R   A+  F  M      P+ +TF+A L AC+ +G +  GK+    ++RC
Sbjct: 676 FNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 727



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/459 (32%), Positives = 255/459 (55%), Gaps = 3/459 (0%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N++++M  +  +   A ++F +M E+ DV  WN ++  Y   G   EAL L+  M   G+
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPER-DVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YTF   L+ C       +G E+HA  ++ G   +V V NAL+ MYA+CG +  A  
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARK 253

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V   +   D +SWN+M+ G  +N      ++ F  +     +P+ +   +   ASG L  
Sbjct: 254 VFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSE 313

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           +   KE+H +A+K+GF  D+   N+L+ MY     +   G++F +M  +D +SWT +I+G
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSD 395
           Y +N    KALE++  ++L  ++ D + I S L AC+ L  +    ++H     KG +  
Sbjct: 374 YEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           +V+ NA++++Y K  +ID +  VF+ +  KDVVSW+SMI+ +  N  + +AL  F  M  
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-L 492

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
            +V+ +S+T ++ALSA ++   L+ GKE++ +++R G   EG V ++L+D+Y +CG    
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
           A   F+    KD++ W  M++    HG G +A+ LF +M
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM 591



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 242/465 (52%), Gaps = 6/465 (1%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           ++ + A  + GQ  +AL L           +   +VA  + CE       GM   A    
Sbjct: 68  SAALRALCSHGQLAQALWLLESSPEP---PDEGAYVALFRLCEWRRAVDAGMRACARADA 124

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
              +  + + NA+++M  R G++  A  V  ++  +D  SWN M+ G+ +     +A+  
Sbjct: 125 EHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDL 184

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           +  +  AG +PD       +   G + +   G+E+HA+ ++ GF  ++ + N L+ MYAK
Sbjct: 185 YYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAK 244

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  +    +VF  M   D ISW  +IAG+ +N+     LELF T+    +  ++M I SV
Sbjct: 245 CGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSV 304

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
            +A   L  +   KE+HG+ +++G + D+   N+++ +Y   G +  +  +F  +E+KD 
Sbjct: 305 TVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDA 364

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           +SWT+MIS Y  NG  ++ALE++ LM   NV  D +T+ SAL+A + L  L  G +L+  
Sbjct: 365 MSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHEL 424

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
              KGF     VA++L++MYA+   +D A +VF  +  KD++ W+SMI     + R   A
Sbjct: 425 AQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDA 484

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRC 591
           +  F  M      P+ +TF+A L AC+ +G +  GK+    ++RC
Sbjct: 485 LYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 528


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/778 (33%), Positives = 427/778 (54%), Gaps = 107/778 (13%)

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           V L N++++ YS +G  L A  LF EM     +  A+++                     
Sbjct: 49  VYLMNNLMNVYSKTGYALHARKLFDEMP----LRTAFSW--------------------- 83

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
                         N +++ Y++ G M        QL  +DSVSW +M+ G+     Y K
Sbjct: 84  --------------NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHK 129

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A++   ++   G +P Q    N +++      +  GK++H++ +K G   ++ + N+L++
Sbjct: 130 AIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLN 189

Query: 305 MYAKC------------------CCVNYM-------GRV------FYQMTAQDFISWTTI 333
           MYAKC                     N M       G++      F QM  +D ++W ++
Sbjct: 190 MYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSM 249

Query: 334 IAGYAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           I+G+ Q    L+AL++F  +  + L   D   + SVL AC+ L+ +   K+IH +I+  G
Sbjct: 250 ISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTG 309

Query: 393 LS-DLVILNAIVDVYGKCGNIDYSR---------------------------------NV 418
                ++LNA++ +Y +CG ++ +R                                 N+
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F S++ +DVV+WT+MI  Y  +G   EA+ LF  M       +S TL + LS ASSL+ L
Sbjct: 370 FVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASL 429

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINA 537
             GK+++G  ++ G     SV+++L+ MYA+ G +  A++ F+ ++  +D + WTSMI A
Sbjct: 430 SHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIA 489

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              HG  + A++LF  M  E   PDHIT++ +  AC+H+GL+N+G+++ ++M+   ++ P
Sbjct: 490 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIP 549

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
              HYAC+VDL GRA  L+EA +F+  M IEP    W +LL ACRVH N +LG++ A++L
Sbjct: 550 TLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERL 609

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           L L+P N G Y  ++N+++A  KW++  ++R  M+   +KK  G SWIE+ +K+H F   
Sbjct: 610 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVE 669

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D +H E +EIY  + +I +++++  GYV  T  VLH++EEE K Q+L  HSE+LAIA+G+
Sbjct: 670 DGTHPEKNEIYMTMKKIWDEIKKM-GYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGL 728

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + + + + +RI KNLRVC DCH+  K +S+L GRE++VRD  RFHHF+ G CSC DYW
Sbjct: 729 ISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 259/559 (46%), Gaps = 102/559 (18%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLRVLETYSRM 49
           +Y K G  L A +LFD++  RT F+WN +L AY   G+           P R   +++ M
Sbjct: 58  VYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTM 117

Query: 50  --------------RVL------GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                         RV+      GI    FT   V+ + A  + ++ G K+H  ++K G 
Sbjct: 118 IVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGL 177

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-------------------------- 123
                + NSL+ MYAKC D   A+ +FDRM  ++                          
Sbjct: 178 RGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQ 237

Query: 124 ----DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETL 178
               D+V WNS+IS ++  G  L AL +F +M R  L++ + +T  + L AC +     +
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARC------------------------------ 208
           G +IH+  V +G ++   V NALI+MY+RC                              
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357

Query: 209 ---GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
              G M +A  +   L+++D V+W +M+ G+ Q+  Y +A+  FR + G GQ+P+     
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
             +S +  L +L +GK++H  A+K G +  + + N L+ MYAK   +    R F  +  +
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477

Query: 326 -DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
            D +SWT++I   AQ+    +ALELF T+ +EGL  D +    V  AC+    ++Q ++ 
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537

Query: 385 HGYI--IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS-YVHN 440
              +  + K +  L     +VD++G+ G +  ++   E +    DVV+W S++S+  VH 
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597

Query: 441 G--LANEALELFYLMNEAN 457
              L   A E   L+   N
Sbjct: 598 NIDLGKVAAERLLLLEPEN 616



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 248/541 (45%), Gaps = 77/541 (14%)

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
           T F  N++++ Y+K  D     + FD++ ++ D V W ++I  Y   GQ  +A+ +  +M
Sbjct: 79  TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR-DSVSWTTMIVGYKNIGQYHKAIRVMGDM 137

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC--- 208
            + G+    +T    L +   +     G ++H+  VK G    V V+N+L+ MYA+C   
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197

Query: 209 ----------------------------GKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                                       G+M  A     Q+  +D V+WNSM++GF Q  
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257

Query: 241 LYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +A+  F + L+ +   PD+    + +SA   L  L  GK++H++ +  GF     + 
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317

Query: 300 NTLMDMYAKCCCV---------------------------------NYMGRVFYQMTAQD 326
           N L+ MY++C  V                                 N    +F  +  +D
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            ++WT +I GY Q+  + +A+ LFR++   G   +   + ++L   S L  +S  K+IHG
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437

Query: 387 YIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNGLAN 444
             ++ G +  + + NA++ +Y K GNI  +   F+ I   +D VSWTSMI +   +G A 
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS-- 502
           EALELF  M    +  D IT V   SA +   ++ +G++   F + K  +      S   
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYA 555

Query: 503 -LVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAE 557
            +VD++ R G L  A +    +  + D++ W S+++A  +H     GKVA +    +E E
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPE 615

Query: 558 S 558
           +
Sbjct: 616 N 616



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 200/447 (44%), Gaps = 67/447 (14%)

Query: 15  FDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFTFPCVIKACAMLKD 73
           F+++++R + TWN+M+  +   G  LR L+ +S+M R   +S D FT   V+ ACA L+ 
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE---------- 123
           L  G +IH  ++  G+D +  ++N+L++MY++C     AR+L ++ G K+          
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354

Query: 124 ----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAY 161
                                 DVV W ++I  Y   G   EA+ LFR M   G   N+Y
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           T  A L      +  + G +IH + VKSG+   V V+NALI MYA+ G +T A+     +
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLI 474

Query: 222 E-NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
              +D+VSW SM+    Q+    +A++ F  +   G +PD +  V   SA    G +  G
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           ++          + D+      +  YA  C V+  GR      AQ+FI    I       
Sbjct: 535 RQYF------DMMKDVDKIIPTLSHYA--CMVDLFGRAGLLQEAQEFIEKMPI------- 579

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN 400
                             + DV+  GS+L AC   K +   K     ++     +    +
Sbjct: 580 ------------------EPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS 621

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDV 427
           A+ ++Y  CG  + +  + +S++   V
Sbjct: 622 ALANLYSACGKWEEAAKIRKSMKDGRV 648



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 127/291 (43%), Gaps = 73/291 (25%)

Query: 358 LDADVMI-IGSVLMACSGLKCMSQTKE--------IHGYIIRKGLS-DLVILNAIVDVYG 407
           +DA V + + ++L  C+ L   S  K         +H  +I+ GL   + ++N +++VY 
Sbjct: 1   MDAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYS 60

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN---------- 457
           K G   ++R +F+ +  +   SW +++S+Y   G  +   E F  + + +          
Sbjct: 61  KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120

Query: 458 ---------------------VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
                                +E    TL + L++ ++   ++ GK+++ FI++ G    
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180

Query: 497 GSVASSLVDMYARC-------------------------------GALDIANKVFNCVQT 525
            SV++SL++MYA+C                               G +D+A   F  +  
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSH 575
           +D++ W SMI+     G    A+D+F KM  +S  +PD  T  ++L AC++
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/643 (37%), Positives = 376/643 (58%), Gaps = 44/643 (6%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           L+  YA    +  A  V  ++  ++ +  N M+  +V N  Y + ++ F  + G   +PD
Sbjct: 80  LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139

Query: 261 Q---VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
                C + A S SG    ++ G+++H  A K G  S L +GN L+ MY KC  ++    
Sbjct: 140 HYTFPCVLKACSCSG---TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           V  +M+ +D +SW +++ GYAQN     ALE+ R ++   +  D   + S+L A S    
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS---- 252

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
            + T E                           N+ Y +++F  +  K +VSW  MI  Y
Sbjct: 253 -NTTTE---------------------------NVMYVKDMFFKMGKKSLVSWNVMIGVY 284

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           + N +  EA+EL+  M     E D++++ S L A    S L  GK+++G+I RK      
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            + ++L+DMYA+CG L+ A  VF  ++++D++ WT+MI+A G  GRG  A+ LF K++  
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              PD I F+  L ACSH+GL+ EG+   ++M   Y++ P  EH AC+VDLLGRA  ++E
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           AY+F++ M +EP   VW ALLGACRVHS+ ++G + A KL +L P   G YVL+SN++A 
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           + +W++V  +R  M+  GLKK PG+S +E+   IH+F+  D+SH +SDEIY++L  + +K
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKK 584

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE-----GSLIRITKNL 792
           + +E GYV  ++  LH+VEEE+K   L  HSE+LAI + ++ + E      + IRITKNL
Sbjct: 585 M-KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNL 643

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           R+C DCH   KL+S++  RE+++RD NRFH F  GVCSCGDYW
Sbjct: 644 RICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 204/413 (49%), Gaps = 36/413 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y     V  A ++FD++ +R V   N M+ +YV+NG     ++ +  M    +  D +TF
Sbjct: 84  YASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTF 143

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           PCV+KAC+    +  G KIHG   K G  ST F+ N LV+MY KC    +AR + D M  
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV WNS++  Y+ + +  +AL + REM+ V +  +A T  + L A  +++ E +   
Sbjct: 204 R-DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--- 259

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
                        +YV +    M+ + GK             K  VSWN M+  +++N +
Sbjct: 260 -------------MYVKD----MFFKMGK-------------KSLVSWNVMIGVYMKNAM 289

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ +  ++  G +PD V   + + A G    L  GK++H Y  ++  + +L + N 
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC C+     VF  M ++D +SWT +I+ Y  +     A+ LF  +Q  GL  D
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNI 412
            +   + L ACS    + + +     +    K    L  L  +VD+ G+ G +
Sbjct: 410 SIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 462



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 34/281 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + +A  + D++S+R V +WN+++  Y  N      LE    M  + IS DA T
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A +                     +T+ +      MY K         +F +MG
Sbjct: 244 MASLLPAVS-------------------NTTTENV------MYVK--------DMFFKMG 270

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K  +V WN +I  Y  +   +EA+ L+  M+  G   +A +  + L AC D+S  +LG 
Sbjct: 271 KKS-LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH    +      + + NALI MYA+CG + +A  V   ++++D VSW +M++ +  + 
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             C A+  F +LQ +G  PD +  V  ++A    G L  G+
Sbjct: 390 RGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 8/222 (3%)

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYSRNV 418
           V ++G VL     ++ +   + +H  II + L   S L +   ++  Y    ++  +R V
Sbjct: 42  VFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGV--KLMRAYASLKDVASARKV 96

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ I  ++V+    MI SYV+NG   E +++F  M   NV  D  T    L A S    +
Sbjct: 97  FDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTI 156

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             G++++G   + G +    V + LV MY +CG L  A  V + +  +D++ W S++   
Sbjct: 157 VIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGY 216

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
             + R   A+++  +ME+   + D  T  +LL A S++   N
Sbjct: 217 AQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 6/107 (5%)

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---N 538
           + ++  II +      S+   L+  YA    +  A KVF+ +  +++I+   MI +   N
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           G +G G   + +F  M   +  PDH TF  +L ACS SG I  G+K 
Sbjct: 119 GFYGEG---VKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/709 (35%), Positives = 406/709 (57%), Gaps = 8/709 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           MY K G + +A ++FDK+  + V +WNAM+     +  P   LE + RM++  G+  D+ 
Sbjct: 171 MYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSV 230

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLK-CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           +   +  A + L+D+D    IHG V++ C +     + NSL+ MY+KC + + A Q+FD+
Sbjct: 231 SILNLAPAVSRLEDVDSCKSIHGYVVRRCVFG---VVSNSLIDMYSKCGEVKLAHQIFDQ 287

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K+D+  W ++++ Y   G   E L L  EM+R  +  N  + V ++ A  ++     
Sbjct: 288 MWVKDDIS-WATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEK 346

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G E+H   ++ G    + VA  +++MYA+CG++ +A      LE +D V W++ L+  VQ
Sbjct: 347 GKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQ 406

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                +A+  F+E+Q  G KPD+    + VSA   + +   GK +H Y IK    SD+ +
Sbjct: 407 AGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISV 466

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             TL+ MY +C    Y   +F +M  +D ++W T+I G+ +      ALE+F  +QL G+
Sbjct: 467 ATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGV 526

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D   + S+L AC+ L  +      HG II+ G+ S++ +  A++D+Y KCG++  + N
Sbjct: 527 QPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAEN 586

Query: 418 VFE-SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           +F  +   KD VSW  MI+ Y+HNG ANEA+  F  M   +V  + +T V+ L A S LS
Sbjct: 587 LFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLS 646

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           IL++    +  IIR GF     + +SL+DMYA+ G L  + K F+ ++ K  I W +M++
Sbjct: 647 ILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLS 706

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
              +HG+G+VA+ LF  M+      D ++++++L AC H+GLI EG+   + M   + L+
Sbjct: 707 GYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLE 766

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHYAC+VDLLG A   +E    +  M  EP A+VW ALLGAC++HSN +LGEI    
Sbjct: 767 PSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHH 826

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           LL+L+P N  +Y+++S+++A   +W D  + R  M   GLKK PG SW+
Sbjct: 827 LLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 188/639 (29%), Positives = 323/639 (50%), Gaps = 10/639 (1%)

Query: 16  DKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLD 75
           + ++  ++  WN+++ AY         +++Y  M  +G+  D +TF  V+KAC    D  
Sbjct: 85  NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFH 144

Query: 76  CGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
            G  IH  +     +   FI   LV MY K      AR++FD+M  K DV  WN++IS  
Sbjct: 145 EGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGK-DVASWNAMISGL 203

Query: 136 SASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
           S S    EAL +F+ MQ   G+  ++ + +    A            IH   V+  + + 
Sbjct: 204 SQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVR--RCVF 261

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
             V+N+LI MY++CG++  A  +  Q+  KD +SW +M+ G+V +  Y + +Q   E++ 
Sbjct: 262 GVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKR 321

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
              K +++  VN+V A+    +L  GKE+H YA++ G  SD+ +   ++ MYAKC  +  
Sbjct: 322 KHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKK 381

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
               F  +  +D + W+  ++   Q     +AL +F+ +Q EGL  D  I+ S++ AC+ 
Sbjct: 382 AKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAE 441

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +      K +H Y+I+  + SD+ +   +V +Y +C +  Y+  +F  +  KDVV+W ++
Sbjct: 442 ISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTL 501

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I+ +   G    ALE+F  +  + V+ DS T+VS LSA + L  L  G   +G II+ G 
Sbjct: 502 INGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGI 561

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNC-VQTKDLILWTSMINANGLHGRGKVAIDLFY 552
             E  V  +L+DMYA+CG+L  A  +F+     KD + W  MI     +G    AI  F 
Sbjct: 562 ESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFN 621

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGR 611
           +M+ ES  P+ +TF+ +L A S+  ++ E   F   I+R  +       +   L+D+  +
Sbjct: 622 QMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGN--SLIDMYAK 679

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
           +  L  + +    M+ + T   W A+L    +H   E+ 
Sbjct: 680 SGQLSYSEKCFHEMENKGTIS-WNAMLSGYAMHGQGEVA 717


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 264/749 (35%), Positives = 421/749 (56%), Gaps = 34/749 (4%)

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETL 178
           G K  +   N++I  Y+ASG C EA+ ++  M  V G+V + +TF   L AC      + 
Sbjct: 81  GTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSE 140

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G+++H   VK G    ++VAN+LI  YA CGK+     V  ++  ++ VSW S++ G+  
Sbjct: 141 GVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSV 200

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            ++  +A+  F E+   G +P+ V  V A+SA  +L +L  GK++     + G  S+  +
Sbjct: 201 VNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLV 260

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+DMY KC  +  +  +F + + ++ + + TI++ Y Q+    + L +   +  +G 
Sbjct: 261 VNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQ 320

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRN 417
             D + + S + AC+ L  +S  K  H Y+ R GL  L  I NAI+D+Y KCG  + +  
Sbjct: 321 RPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACK 380

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN-------------------- 457
           VF+S+ +K VV+W S+I+  V +G    AL +F  M E+N                    
Sbjct: 381 VFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEA 440

Query: 458 -----------VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
                      ++ D +T+V   SA   L  L   K +  +I +   +++  + ++LVDM
Sbjct: 441 IDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDM 500

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           ++RCG    A +VF  ++ +D+  WT+ I    + G  K AI+LF +M  +    D   F
Sbjct: 501 FSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVF 560

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           +ALL A SH G +++G++    M   + + P   HY C+VDLLGRA  LEEA+  ++SM 
Sbjct: 561 VALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMP 620

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           I+P   +W + L ACR H N E      +K+ +L P   G +VL+SN++A++ KW DV +
Sbjct: 621 IKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVAR 680

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR++M+  G +K  GSS IE+   I  F + D+SH+E+ +I   L EI  ++  + GYV 
Sbjct: 681 VRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRIS-QVGYVP 739

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
            T  VL +V+E+EK  +L  HSE+LA+AYG++ + +G  IR+ KNLR+C DCHSF KLVS
Sbjct: 740 DTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVS 799

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +L+GRE+ VRD NR+H F+ G CSC D+W
Sbjct: 800 KLYGREITVRDNNRYHFFKEGFCSCRDFW 828



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 169/589 (28%), Positives = 291/589 (49%), Gaps = 48/589 (8%)

Query: 16  DKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAFTFPCVIKACAMLKDL 74
           D+ ++ +++T N ++  Y ++G     +  Y  M  V+GI  D FTFP ++ AC+ +   
Sbjct: 79  DEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAF 138

Query: 75  DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
             G ++HG+V+K G     F+ NSL+  YA C      R++FD M E+ +VV W S+I+ 
Sbjct: 139 SEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLER-NVVSWTSLING 197

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
           YS      EA+ LF EM  VG+  N  T V A+ AC       LG ++     + G    
Sbjct: 198 YSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSN 257

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
             V NAL+ MY +CG M     +  +  +K+ V +N++++ +VQ+ L  + +    E+  
Sbjct: 258 TLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQ 317

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC----- 309
            GQ+PD+V  ++ ++A  +LG+L  GK  HAY  + G      I N ++DMY KC     
Sbjct: 318 KGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREA 377

Query: 310 -CCV-NYMG------------------------RVFYQMTAQDFISWTTIIAGYAQNNCH 343
            C V + M                         R+F +M   + +SW T+I    Q +  
Sbjct: 378 ACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMF 437

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAI 402
            +A++L R +Q +G+  D + +  +  AC  L  +   K I+ YI +  +  D+ +  A+
Sbjct: 438 EEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTAL 497

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           VD++ +CG+   +  VFE++E +DV +WT+ I      G A  A+ELF  M + +V++D 
Sbjct: 498 VDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADD 557

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVF 520
              V+ L+A S    + +G++L  + + K   +   +     +VD+  R G L+ A  + 
Sbjct: 558 FVFVALLTAFSHGGYVDQGRQL-FWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLM 616

Query: 521 NCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
             +  K + ++W S + A   H            +E  ++A + IT LA
Sbjct: 617 KSMPIKPNDVIWGSFLAACRKHK----------NVEFANYADEKITQLA 655



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 223/475 (46%), Gaps = 47/475 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG V    ++FD++ +R V +W +++  Y         +  +  M  +G+  +  T 
Sbjct: 167 YAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTM 226

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
            C I ACA LKDL+ G K+  L+ + G  S   +VN+L+ MY KC D    R++FD   +
Sbjct: 227 VCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSD 286

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K ++V++N+I+S Y   G   E L +  EM + G   +  T ++ + AC      ++G  
Sbjct: 287 K-NLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKS 345

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF----- 236
            HA   ++G      ++NA+I MY +CGK   A  V   + NK  V+WNS++ G      
Sbjct: 346 SHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGE 405

Query: 237 --------------------------VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
                                     VQ  ++ +A+   RE+Q  G K D+V  V   SA
Sbjct: 406 LELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASA 465

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
            G LG L   K ++ Y  K     D+Q+G  L+DM+++C       RVF  M  +D  +W
Sbjct: 466 CGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAW 525

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKE 383
           T  I   A       A+ELF  +  + + AD  +  ++L A S       G +     ++
Sbjct: 526 TAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEK 585

Query: 384 IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES--IESKDVVSWTSMISS 436
           IHG         +V    +VD+ G+ G ++ + ++ +S  I+  DV+ W S +++
Sbjct: 586 IHGVS-----PQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVI-WGSFLAA 634



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 129/313 (41%), Gaps = 30/313 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +    ++FD+ S + +  +N ++  YV +G    VL     M   G   D  T
Sbjct: 267 MYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVT 326

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I ACA L DL  G   H  V + G +  D I N+++ MY KC     A ++FD M 
Sbjct: 327 MLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMS 386

Query: 121 EK------------------------------EDVVLWNSIISAYSASGQCLEALGLFRE 150
            K                               ++V WN++I A   +    EA+ L RE
Sbjct: 387 NKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLRE 446

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           MQ  G+  +  T V    AC       L   I+    K+  ++ + +  AL+ M++RCG 
Sbjct: 447 MQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGD 506

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
              A  V   +E +D  +W + +           A++ F E+     K D    V  ++A
Sbjct: 507 PLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTA 566

Query: 271 SGRLGNLLNGKEL 283
               G +  G++L
Sbjct: 567 FSHGGYVDQGRQL 579



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 116/217 (53%), Gaps = 3/217 (1%)

Query: 376 KCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT--SM 433
           K + + K++H  +++KG+ ++  L A     G   +++Y+ N F+  E      +T  ++
Sbjct: 33  KTLIELKQLHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTL 92

Query: 434 ISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           I  Y  +GL  EA+ ++ +++    +  D+ T    LSA S +    +G +++G +++ G
Sbjct: 93  IRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMG 152

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
              +  VA+SL+  YA CG +D+  KVF+ +  ++++ WTS+IN   +    K A+ LF+
Sbjct: 153 LVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFF 212

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           +M      P+ +T +  + AC+    +  GKK   +M
Sbjct: 213 EMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLM 249


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 275/874 (31%), Positives = 439/874 (50%), Gaps = 76/874 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVS-NGEPLRVLETYSRMRVLGISVDAFT 60
           Y + G    A ++F     R    WN+ +  + S  G+   +L  +  +   G+  D+  
Sbjct: 74  YLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKA 133

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+K C  L +L  G ++H  ++K G+     +  +L+ +Y K      A Q+FD   
Sbjct: 134 LTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETP 193

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +ED  LWN+I+ A   S +  +AL LFR MQ         T V  LQAC        G 
Sbjct: 194 LQEDF-LWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGK 252

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   ++ G+     + N++++MY+R  ++  A       E+ +S SWNS+++ +  ND
Sbjct: 253 QIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVND 312

Query: 241 L-----------------------------------YCKAMQFFRELQGAGQKPDQVCTV 265
                                               Y   +  FR LQ AG KPD     
Sbjct: 313 CLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSIT 372

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           +A+ A   LG    GKE+H Y ++     D+ +  +L+D Y K  C++    VF+    +
Sbjct: 373 SALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNK 432

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           +  +W ++I+GY        A +L   ++ EG+  D                        
Sbjct: 433 NICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPD------------------------ 468

Query: 386 GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIES----KDVVSWTSMISSYVHNG 441
                     LV  N++V  Y   G  + +  V   I+S     +VVSWT+MIS    N 
Sbjct: 469 ----------LVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNE 518

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
              +AL+ F  M E NV+ +S T+ + L A +  S+LK G+E++ F +R GF  +  +A+
Sbjct: 519 NYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIAT 578

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           +L+DMY + G L +A++VF  ++ K L  W  M+    ++G G+    LF +M      P
Sbjct: 579 ALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRP 638

Query: 562 DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
           D ITF ALL  C +SGL+ +G K+ + M+ DY ++P  EHY+C+VDLLG+A  L+EA  F
Sbjct: 639 DAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDF 698

Query: 622 VRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKW 681
           + ++  +  A +W A+L ACR+H + ++ EI A+ LL L+P N  NY L+ N+++   +W
Sbjct: 699 IHAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRW 758

Query: 682 KDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLERE 741
            DVE+++  M   G+K     SWI++   IH F    KSH E  EIY +L ++  ++++ 
Sbjct: 759 GDVERLKESMTALGVKIPNVWSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKL 818

Query: 742 GGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSF 801
            GYV     V  N+++ EK ++L  H+E+LA+ YG++K+  GS IR+ KN R+C DCH+ 
Sbjct: 819 -GYVLDINCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTT 877

Query: 802 CKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            K +S    RE+ +RD  RFHHF  G CSC D W
Sbjct: 878 AKYISLARNREIFLRDGGRFHHFMNGECSCKDRW 911



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 154/586 (26%), Positives = 264/586 (45%), Gaps = 72/586 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K   +  A Q+FD+   +  F WN ++ A + + +    LE + RM+         T
Sbjct: 175 LYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGT 234

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM- 119
              +++AC  L+ L+ G +IHG V++ G  S   I NS+V+MY++      AR  FD   
Sbjct: 235 IVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTE 294

Query: 120 ---------------------------------GEKEDVVLWNSIISAYSASGQCLEALG 146
                                            G K D++ WNS++S +   G     L 
Sbjct: 295 DHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLT 354

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
            FR +Q  G   ++ +  +ALQA        LG EIH   ++S     VYV  +L+  Y 
Sbjct: 355 NFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYI 414

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +   + +A  V +  +NK+  +WNS+++G+    L+  A +   +++  G KPD V   +
Sbjct: 415 KNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNS 474

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            VS     G  ++G+   A A+                          + R+       +
Sbjct: 475 LVS-----GYSMSGRSEEALAV--------------------------INRIKSLGLTPN 503

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SWT +I+G  QN  ++ AL+ F  +Q E +  +   I ++L AC+G   +   +EIH 
Sbjct: 504 VVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHC 563

Query: 387 YIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           + +R G L D+ I  A++D+YGK G +  +  VF +I+ K +  W  M+  Y   G   E
Sbjct: 564 FSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEE 623

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVA--SS 502
              LF  M +  V  D+IT  + LS   +  ++  G K  +   ++  +N+  ++   S 
Sbjct: 624 VFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDS--MKTDYNINPTIEHYSC 681

Query: 503 LVDMYARCGALDIANKVFNCV-QTKDLILWTSMINANGLHGRGKVA 547
           +VD+  + G LD A    + V Q  D  +W +++ A  LH   K+A
Sbjct: 682 MVDLLGKAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDIKIA 727


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 236/586 (40%), Positives = 374/586 (63%), Gaps = 3/586 (0%)

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           ++ +G  P+Q    + +SAS     +L+G++LH+   K GF +++ +G  L+DMYAKC  
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLM 370
           ++   RVF QM  ++ +SW ++I G+  NN + +A+ +F+ V  E  +  + + + SVL 
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC+ +  ++  +++HG +++ GL  L  ++N+++D+Y KC   D    +F+ +  +DVV+
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           W  ++  +V N    EA   F++M    +  D  +  + L +++SL+ L +G  ++  II
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           + G+     +  SL+ MYA+CG+L  A +VF  ++  ++I WT+MI+A  LHG     I+
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLL 609
           LF  M +E   P H+TF+ +L ACSH+G + EG      M+  + ++P PEHYAC+VDLL
Sbjct: 301 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLL 360

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV 669
           GRA  L+EA +F+ SM ++PT  VW ALLGACR + N ++G   A++L E++P NPGNYV
Sbjct: 361 GRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYV 420

Query: 670 LISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYK 729
           L++N+   S + ++  +VR  M  +G++K PG SWI++ N    F A D+SHS SDEIY 
Sbjct: 421 LLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIY- 479

Query: 730 KLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRIT 789
           K+ E  EKL ++ GYVA+T+FV +++EE E+ Q L+ HSE+LA+A+G+L     S IRI 
Sbjct: 480 KMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIK 539

Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           KNLR C  CH+  KL S++F RE++VRD NRFH F  G CSCGDYW
Sbjct: 540 KNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 212/421 (50%), Gaps = 18/421 (4%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           MR  G   + FTF  ++ A A    +  G ++H L+ K G+D+  F+  +LV MYAKC D
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAAL 167
              A ++FD+M E+ ++V WNS+I  +  +     A+G+F+++ R   ++ N  +  + L
Sbjct: 61  MHSAVRVFDQMPER-NLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVL 119

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
            AC +      G ++H   VK G     YV N+L+ MY +C    E   +   + ++D V
Sbjct: 120 SACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVV 179

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           +WN ++ GFVQND + +A  +F  ++  G  PD+      + +S  L  L  G  +H   
Sbjct: 180 TWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQI 239

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           IK G+V ++ I  +L+ MYAKC  +    +VF  +   + ISWT +I+ Y  + C  + +
Sbjct: 240 IKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVI 299

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILN 400
           ELF  +  EG++   +    VL ACS       GL   +  K+IH   +  G      + 
Sbjct: 300 ELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHD--MNPGPEHYACM- 356

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS---YVHNGLANEALELFYLMNEA 456
             VD+ G+ G +D ++   ES+  K   S W +++ +   Y +  +  EA E  + M   
Sbjct: 357 --VDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPY 414

Query: 457 N 457
           N
Sbjct: 415 N 415



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 167/329 (50%), Gaps = 10/329 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAF 59
           MY KC  +  A ++FD++ +R + +WN+M+  +  N    R +  +   +R   +  +  
Sbjct: 54  MYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEV 113

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +   V+ ACA +  L+ G ++HG+V+K G     +++NSL+ MY KC  F +  +LF  +
Sbjct: 114 SVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCV 173

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           G++ DVV WN ++  +  + +  EA   F  M+R G++ +  +F   L +    +    G
Sbjct: 174 GDR-DVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQG 232

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH   +K G    + +  +LI MYA+CG + +A  V   +E+ + +SW +M++ +  +
Sbjct: 233 TAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLH 292

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               + ++ F  +   G +P  V  V  +SA    G +  G   H  ++K+  + D+  G
Sbjct: 293 GCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLA-HFNSMKK--IHDMNPG 349

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
               + YA  C V+ +GR  +   A+ FI
Sbjct: 350 P---EHYA--CMVDLLGRAGWLDEAKRFI 373



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 5/236 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC    +  +LF  V  R V TWN ++  +V N +       +  MR  GI  D  +
Sbjct: 156 MYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEAS 215

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ + A L  L  G  IH  ++K GY     I+ SL+ MYAKC     A Q+F+ + 
Sbjct: 216 FSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGI- 274

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  +V+ W ++ISAY   G   + + LF  M   G+  +  TFV  L AC  +     G+
Sbjct: 275 EDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGL 334

Query: 181 EIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
             H  ++K   ++     +   ++ +  R G + EA   +  +  K + S W ++L
Sbjct: 335 A-HFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALL 389


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/845 (32%), Positives = 448/845 (53%), Gaps = 44/845 (5%)

Query: 28  AMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKC 87
           AMLG ++ +  P+ +  + S+  +   S      P  +K C  + +L      H  + K 
Sbjct: 2   AMLGNFL-HFSPMVLAISTSKPSLPNQSKRTKATPSSLKNCKTIDEL---KMFHLSLTKQ 57

Query: 88  GYDSTDFIVNSLVAMYAKC---YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           G D     +  LVA   +         A+++F+         ++NS+I  Y++SG C EA
Sbjct: 58  GLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEA 117

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
           + LF  M   G+  + YTF   L  C  S  +  G++IH   +K      ++V N+L+  
Sbjct: 118 ILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHF 177

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ-FFRELQGAGQKPDQVC 263
           YA CG++  A  V  ++  ++ VSW SM+ G+ + +    A+  FFR ++     P+ V 
Sbjct: 178 YAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVT 237

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
            V  +SA  +L +L  G++++ +    G  V+DL I + L+DMY KC  ++   R+F + 
Sbjct: 238 MVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMI-SALVDMYMKCNAIDIAKRLFDEY 296

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
            A +      + + Y +     +AL +   +   G+  D + + S + +CS L+ +   K
Sbjct: 297 GASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGK 356

Query: 383 EIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
             HGY++R G      I NA++D+Y KC   D +  +F+ + +K VV+W S+++ Y+ NG
Sbjct: 357 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENG 416

Query: 442 LANEALELFYLMNEANVES--------------------------------DSITLVSAL 469
             + A E F  M E N+ S                                D +T++S  
Sbjct: 417 EVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIA 476

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           SA   L  L   K +  +I +    L+  + ++LVDM++RCG  + A  +FN +  +D+ 
Sbjct: 477 SACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 536

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            WT+ I A  + G  + AI+LF +M  +   PD + F+  L AC H GL+ +GK+    M
Sbjct: 537 AWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSM 596

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
              + + P   HY C+VDLLGRA  LEEA Q ++ M  EP   +W +LL ACRV  N E+
Sbjct: 597 EKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEM 656

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
               A+K+  L P   G+YVL+SNV+A++ +W D+ +VR+ M+  GL+K PG+S I+I  
Sbjct: 657 AAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRG 716

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           K H F + D+SH E  +I   L E++++   + G+V     VL +V+E+EK+ ML  HSE
Sbjct: 717 KTHEFTSGDESHPEMRKIEAMLDELSQRAS-DLGHVPDLSNVLMDVDEQEKIFMLSRHSE 775

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           +LA+A+G++ S +G+ IRI KNLRVC  CHSF K  S+++ RE+++RD NRFH    G C
Sbjct: 776 KLAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKC 835

Query: 830 SCGDY 834
           SC D+
Sbjct: 836 SCSDF 840



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/597 (27%), Positives = 300/597 (50%), Gaps = 40/597 (6%)

Query: 11  AEQLFDK-VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           A+++F+   S  T F +N+++  Y S+G     +  + RM   GIS D +TFP  +  CA
Sbjct: 85  AKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCA 144

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
             +D   G +IHGL++K  Y    F+ NSLV  YA+C +   AR++FD M E+ +VV W 
Sbjct: 145 KSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSER-NVVSWT 203

Query: 130 SIISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           S+I  Y+      +A+ LF  M R   ++ N+ T V  + AC        G +++     
Sbjct: 204 SMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRD 263

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
           SG  +   + +AL+ MY +C  +  A  +  +    +    N+M + +V+  L  +A+  
Sbjct: 264 SGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGV 323

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
              +  +G +PD++  ++A+S+  +L N+L GK  H Y ++ GF S   I N L+DMY K
Sbjct: 324 LNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 383

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN---------------------------- 340
           C   +   R+F +M+ +  ++W +I+AGY +N                            
Sbjct: 384 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISAL 443

Query: 341 ---NCHLKALELFRTVQ-LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-D 395
              N + +A+E+F  +Q  E ++ D + + S+  AC  L  +   K I+ YI +  +  D
Sbjct: 444 VQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLD 503

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + +   +VD++ +CG+ + + ++F S+ ++DV +WT+ I +    G    A+ELF  M E
Sbjct: 504 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIE 563

Query: 456 ANVESDSITLVSALSAASSLSILKKGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALD 514
             ++ D +  + AL+A     ++++GKE+ N      G + E      +VD+  R G L+
Sbjct: 564 QGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLE 623

Query: 515 IANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
            A ++   + T+ + ++W S++ A  + G  ++A   F   + +  AP+      LL
Sbjct: 624 EALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAA--FAAEKIQVLAPERTGSYVLL 678



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 228/472 (48%), Gaps = 39/472 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFT 60
           Y +CG +  A ++FD++S+R V +W +M+  Y         ++ + RM R   +  ++ T
Sbjct: 178 YAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVT 237

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             CVI ACA L+DL+ G K++  +   G +  D ++++LV MY KC     A++LFD  G
Sbjct: 238 MVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYG 297

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              ++ L N++ S Y   G   EALG+   M   G+  +  + ++A+ +C        G 
Sbjct: 298 -ASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGK 356

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN- 239
             H   +++G      + NALI MY +C +   A  +  ++ NK  V+WNS++ G+++N 
Sbjct: 357 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENG 416

Query: 240 ------------------------------DLYCKAMQFFRELQGAG-QKPDQVCTVNAV 268
                                         ++Y +A++ F  +Q       D V  ++  
Sbjct: 417 EVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIA 476

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           SA G LG L   K ++ Y  K     D+++G TL+DM+++C        +F  +T +D  
Sbjct: 477 SACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 536

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           +WT  I   A      +A+ELF  +  +GL  D ++    L AC     + Q KEI   +
Sbjct: 537 AWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSM 596

Query: 389 IR-KGLS-DLVILNAIVDVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISS 436
            +  G+S + V    +VD+ G+ G ++ +  + + +  E  DV+ W S++++
Sbjct: 597 EKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVI-WNSLLAA 647



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 165/383 (43%), Gaps = 38/383 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC ++  A++LFD+     +   NAM   YV  G     L   + M   GI  D  +
Sbjct: 279 MYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRIS 338

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I +C+ L+++  G   HG VL+ G++S D I N+L+ MY KC+    A ++FDRM 
Sbjct: 339 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 398

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-----------NAY-------- 161
            K  VV WNSI++ Y  +G+   A   F  M    +V+           N Y        
Sbjct: 399 NKT-VVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFH 457

Query: 162 -------------TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
                        T ++   AC       L   I+    K+   L V +   L+ M++RC
Sbjct: 458 YMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRC 517

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G    A  +   L N+D  +W + +          +A++ F E+   G KPD V  + A+
Sbjct: 518 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGAL 577

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVS--DLQIGNTLMDMYAKCCCVNYMGRVFYQM-TAQ 325
           +A    G +  GKE+     K   VS  D+  G  ++D+  +   +    ++   M T  
Sbjct: 578 TACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYG-CMVDLLGRAGLLEEALQLIKDMPTEP 636

Query: 326 DFISWTTIIAG-YAQNNCHLKAL 347
           + + W +++A    Q N  + A 
Sbjct: 637 NDVIWNSLLAACRVQGNVEMAAF 659


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/700 (35%), Positives = 400/700 (57%), Gaps = 40/700 (5%)

Query: 173 SSFETLGMEIHAATV---KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
           +++ + G+  HA  V     G+NL     N+L++  AR G + +   +   L  +D+VS+
Sbjct: 54  TAYASSGLLPHARRVFDAMPGRNL--VTGNSLLSALARAGLVRDMERLFTSLPQRDAVSY 111

Query: 230 NSMLTGFVQNDLYCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           N++L GF +   + +A   +  L    AG +P ++     V  +  LG+   G+++H   
Sbjct: 112 NALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQI 171

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ---------------------- 325
           ++ GF +    G+ L+DMYAK   +    RVF +M  +                      
Sbjct: 172 LRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEAR 231

Query: 326 ---------DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
                    D I+WTT++ G  QN    +AL++FR ++ EG+  D    GS+L AC  L 
Sbjct: 232 ALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALA 291

Query: 377 CMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            + + K+IH YI R    D V + +A+VD+Y KC ++  +  VF  +  K+++SWT+MI 
Sbjct: 292 ALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIV 351

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  NG   EA+ +F  M    ++ D  TL S +S+ ++L+ L++G + +   +  G   
Sbjct: 352 GYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRP 411

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
             +V+++LV +Y +CG+++ A+++F+ +   D + WT+++      G+ K  IDLF KM 
Sbjct: 412 YVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKML 471

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
           ++   PD +TF+ +L ACS SGL+++G+ +   M+ D+ + P  +HY C++DL  R+  L
Sbjct: 472 SKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWL 531

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           ++A +F++ M   P A  W  LL ACR+  + E+G+  A+ LL+LDP NP +YVL+ ++ 
Sbjct: 532 KQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMH 591

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           A+  +W DV ++R  MR   +KK PG SWI+  NK+H F A D+SH  S  IY+KL  + 
Sbjct: 592 ASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLN 651

Query: 736 EKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVC 795
            K+  E GY      VLH+V + EKV ML  HSE+LAIA+G++       IRI KNLRVC
Sbjct: 652 SKMVEE-GYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVC 710

Query: 796 VDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           VDCH+  K +S++ GR+++VRDA RFH F  G+CSCGD+W
Sbjct: 711 VDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 218/471 (46%), Gaps = 39/471 (8%)

Query: 3   GKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM--RVLGISVDAFT 60
            + G V D E+LF  + QR   ++NA+L  +   G   R    Y  +     G+     T
Sbjct: 88  ARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRIT 147

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+   + L D   G ++H  +L+ G+ +  F  + LV MYAK      AR++FD M 
Sbjct: 148 MSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEME 207

Query: 121 ------------------------------EKEDVVLWNSIISAYSASGQCLEALGLFRE 150
                                         E+ D + W ++++  + +G   EAL +FR 
Sbjct: 208 GKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRR 267

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M+  G+  + YTF + L AC   +    G +IHA   ++     V+V +AL+ MY++C  
Sbjct: 268 MRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRS 327

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           +  A  V  ++  K+ +SW +M+ G+ QN    +A++ F E+Q  G KPD     + +S+
Sbjct: 328 VRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISS 387

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
              L +L  G + H  A+  G    + + N L+ +Y KC  +    R+F +M+  D +SW
Sbjct: 388 CANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 447

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
           T ++ GYAQ     + ++LF  +  +G+  D +    VL ACS    + + +     + +
Sbjct: 448 TALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQ 507

Query: 391 KGLSDLVILN----AIVDVYGKCGNIDYSRNVFESIES-KDVVSWTSMISS 436
               D+V L+     ++D+Y + G +  +    + +    D   W +++S+
Sbjct: 508 D--HDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA 556



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 188/395 (47%), Gaps = 11/395 (2%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           +C  V +A  LF+ + +R   TW  M+     NG     L+ + RMR  G+ +D +TF  
Sbjct: 223 RCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGS 282

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++ AC  L  L+ G +IH  + +  Y+   F+ ++LV MY+KC   R A  +F RM  K 
Sbjct: 283 ILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWK- 341

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +++ W ++I  Y  +G   EA+ +F EMQR G+  + +T  + + +C + +    G + H
Sbjct: 342 NIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFH 401

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              + SG    V V+NAL+ +Y +CG + +A  +  ++   D VSW +++ G+ Q     
Sbjct: 402 CLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAK 461

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIGNTL 302
           + +  F ++   G KPD V  +  +SA  R G +  G+   H+       V        +
Sbjct: 462 ETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCM 521

Query: 303 MDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKA-LELFRTVQLEGLDA 360
           +D+Y++   +        QM    D   W T+++      C L+  +E+ +      L  
Sbjct: 522 IDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA-----CRLRGDMEIGKWAAENLLKL 576

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           D     S ++ CS      +  ++    +R+G+ D
Sbjct: 577 DPQNPASYVLLCSMHASKGEWNDVAK--LRRGMRD 609



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 113/237 (47%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC SV  AE +F ++  + + +W AM+  Y  NG     +  +S M+  GI  D FT
Sbjct: 321 MYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFT 380

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +CA L  L+ GA+ H L L  G      + N+LV +Y KC     A +LFD M 
Sbjct: 381 LGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEM- 439

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V W +++  Y+  G+  E + LF +M   G+  +  TF+  L AC  S     G 
Sbjct: 440 SFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGR 499

Query: 181 EIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLTG 235
               +  +    + +      +I +Y+R G + +A   + Q+    D+  W ++L+ 
Sbjct: 500 SYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA 556


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/681 (35%), Positives = 394/681 (57%), Gaps = 3/681 (0%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++AC   K L  G  IH  V+  G  +  F+  +L+  Y  C+ +  A+ +FD M    
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLGMEI 182
           ++ LWN +++ Y+ +   +EAL LF ++     L  ++YT+ +  +AC       LG  I
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H   +K+G  + + V ++L+ MY +C    +A  +  ++  KD   WN++++ + Q+  +
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
             A+++F  ++  G +P+ V    A+S+  RL +L  G E+H   I  GF+ D  I + L
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMY KC  +     +F QM  +  ++W ++I+GY      +  ++LF+ +  EG+   +
Sbjct: 249 VDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTL 308

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVFES 421
             + S++M CS    + + K +HGY IR  +   V +N+ ++D+Y KCG ++ +  +F+ 
Sbjct: 309 TTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKL 368

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           I    VVSW  MIS YV  G   EAL LF  M ++ VESD+IT  S L+A S L+ L+KG
Sbjct: 369 IPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKG 428

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           KE++  II K  +    V  +L+DMYA+CGA+D A  VF C+  +DL+ WTSMI A G H
Sbjct: 429 KEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSH 488

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G    A++LF +M   +  PD + FLA+L AC H+GL++EG  +   M   Y + P  EH
Sbjct: 489 GHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEH 548

Query: 602 YACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           Y+CL+DLLGRA  L EAY+ + ++ +I    E+   L  ACR+H N +LG  +A+ L++ 
Sbjct: 549 YSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDK 608

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP +   Y+L+SN++A++ KW +V  VR +M+  GLKK PG SWIEI  KI  F   D S
Sbjct: 609 DPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNS 668

Query: 721 HSESDEIYKKLAEITEKLERE 741
           H   + ++K L+ +++ +E E
Sbjct: 669 HLHLELVFKCLSYLSDHMEDE 689



 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 177/550 (32%), Positives = 283/550 (51%), Gaps = 15/550 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQR-TVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           Y  C     A+ +FD +     +  WN ++  Y  N   +  LE + ++     +  D++
Sbjct: 48  YLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSY 107

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+P V KAC  L     G  IH  ++K G      + +SLV MY KC  F KA  LF+ M
Sbjct: 108 TYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEM 167

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK DV  WN++IS Y  SG   +AL  F  M+R G   N+ T   A+ +C        G
Sbjct: 168 PEK-DVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRG 226

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           MEIH   + SG  L  ++++AL+ MY +CG +  A  +  Q+  K  V+WNSM++G+   
Sbjct: 227 MEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLK 286

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                 +Q F+ +   G KP      + +    R   LL GK +H Y I+     D+ + 
Sbjct: 287 GDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVN 346

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           ++LMD+Y KC  V    ++F  +     +SW  +I+GY       +AL LF  ++   ++
Sbjct: 347 SSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVE 406

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
           +D +   SVL ACS L  + + KEIH  II K L ++ V++ A++D+Y KCG +D + +V
Sbjct: 407 SDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSV 466

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  +D+VSWTSMI++Y  +G A  ALELF  M ++NV+ D +  ++ LSA     ++
Sbjct: 467 FKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLV 526

Query: 479 KKGKELNGFIIRKGFNLEGSVA-----SSLVDMYARCGALDIANKVF--NCVQTKDLILW 531
            +G     +   +  N+ G +      S L+D+  R G L  A ++   N     D+ L 
Sbjct: 527 DEG----CYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELL 582

Query: 532 TSMINANGLH 541
           +++ +A  LH
Sbjct: 583 STLFSACRLH 592



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 220/444 (49%), Gaps = 14/444 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC +   A  LF+++ ++ V  WN ++  Y  +G     LE +  MR  G   ++ T
Sbjct: 150 MYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVT 209

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I +CA L DL+ G +IH  ++  G+    FI ++LV MY KC     A ++F++M 
Sbjct: 210 ITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQM- 268

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K+ VV WNS+IS Y   G  +  + LF+ M   G+     T  + +  C  S+    G 
Sbjct: 269 PKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGK 328

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H  T+++     V+V ++L+ +Y +CGK+  A  +   +     VSWN M++G+V   
Sbjct: 329 FVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEG 388

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E++ +  + D +   + ++A  +L  L  GKE+H   I++   ++  +  
Sbjct: 389 KLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMG 448

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  V+    VF  +  +D +SWT++I  Y  +     ALELF  +    +  
Sbjct: 449 ALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKP 508

Query: 361 DVMIIGSVLMAC-------SGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           D +   ++L AC        G    +Q   ++G I R     +   + ++D+ G+ G + 
Sbjct: 509 DRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPR-----VEHYSCLIDLLGRAGRLH 563

Query: 414 YSRNVF-ESIESKDVVSWTSMISS 436
            +  +  ++ E +D V   S + S
Sbjct: 564 EAYEILQQNPEIRDDVELLSTLFS 587


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/557 (40%), Positives = 345/557 (61%), Gaps = 3/557 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GK+LHA     GF  D  I   L+++Y  C  ++    +F ++   +   W  +I GYA 
Sbjct: 94  GKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAW 153

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVI 398
           N  +  A++L+  +   GL  D      VL AC+ L  +   +EIH ++++ G   D+ +
Sbjct: 154 NGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFV 213

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
             A++D+Y KCG +  +R VF+ I  +D V W SM+++Y  NG  +  L L   M    +
Sbjct: 214 GAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGL 273

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
                TLV+A+SA++  + L +G+EL+G   R+ F     V ++LVDMYA+CG++ +A  
Sbjct: 274 RPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARN 333

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           +F  +  K ++ W +MI    +HG    A+DLF +M   +  PDHITF+ +L ACSH GL
Sbjct: 334 LFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGL 392

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           + EG  F E M  DY++DP  +HY C+VDLLG +  L+EAY  +  M++ P + VW ALL
Sbjct: 393 LEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALL 452

Query: 639 GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
            +C++H+N ELGEI  ++L+EL+P + GNYV++SN++A + KW+ V ++R  M    LKK
Sbjct: 453 NSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKK 512

Query: 699 TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
           +   SWIE+ NK+H+F++ D SH  SDEIY +L  +   L +E GY   T  V H+VE++
Sbjct: 513 SIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVG-GLMKEAGYSPSTGSVFHDVEDD 571

Query: 759 EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
           EK  M+  HSERLAIA+G++ +  G+ + ITKNLR+C DCH   K +S++  RE+ VRD 
Sbjct: 572 EKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDV 631

Query: 819 NRFHHFEAGVCSCGDYW 835
           NR+HHF+ GVCSCGDYW
Sbjct: 632 NRYHHFKDGVCSCGDYW 648



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 186/379 (49%), Gaps = 5/379 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++++C   K +  G ++H  V   G+     I   LV +Y  C     AR LFDR+ 
Sbjct: 78  YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRI- 136

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K ++ LWN +I  Y+ +G    A+ L+ +M   GLV + +TF   L+AC   S    G 
Sbjct: 137 PKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGR 196

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH   V++G    V+V  ALI MYA+CG +  A  V  ++  +D+V WNSML  + QN 
Sbjct: 197 EIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNG 256

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                +    E+   G +P +   V A+SAS     L  G+ELH  + +Q F S  ++  
Sbjct: 257 HPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKT 316

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  V     +F ++  +  +SW  +I GYA +    +AL+LF  +       
Sbjct: 317 ALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPD 376

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYSRNV 418
            +  +G VL ACS    + +       +IR    D  +     +VD+ G  G +D + N+
Sbjct: 377 HITFVG-VLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNL 435

Query: 419 FESIES-KDVVSWTSMISS 436
              ++   D   W ++++S
Sbjct: 436 IMQMKVLPDSGVWGALLNS 454



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 190/382 (49%), Gaps = 15/382 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  C S+  A  LFD++ +  +F WN ++  Y  NG     ++ Y +M   G+  D FT
Sbjct: 119 LYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFT 178

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP V+KACA L  ++ G +IH  V++ G++   F+  +L+ MYAKC     AR++FD++ 
Sbjct: 179 FPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKIL 238

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D VLWNS+++AYS +G     L L  EM   GL     T V A+ A  D++    G 
Sbjct: 239 VR-DAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGR 297

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H  + +        V  AL+ MYA+CG +  A  +  +L  K  VSWN+M+TG+  + 
Sbjct: 298 ELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHG 357

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E+     KPD +  V  +SA    G L  G     +   +  + D +I  
Sbjct: 358 HATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEG-----WMFFETMIRDYKIDP 411

Query: 301 TLMDMYAKCCCVNYMGRV--FYQMTAQDFISWTTIIAGYAQNNCHLKA------LELFRT 352
           T+         + + GR+   Y +  Q  +   + + G   N+C + A      + L R 
Sbjct: 412 TVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERL 471

Query: 353 VQLEGLDADVMIIGSVLMACSG 374
           ++LE  DA   +I S + A +G
Sbjct: 472 IELEPDDAGNYVILSNIYAQAG 493



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 93/193 (48%), Gaps = 11/193 (5%)

Query: 456 ANVESDSITLVSALSAASSL-------SILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           +N  ++S  L    S  +SL         +K GK+L+  +   GF  +  +A+ LV++Y 
Sbjct: 62  SNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYC 121

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
            C +L  A  +F+ +   ++ LW  +I     +G  + A+ L+Y+M      PD+ TF  
Sbjct: 122 VCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPF 181

Query: 569 LLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
           +L AC+    I  G++  E +++  ++ D +    A L+D+  +   +  A +    + +
Sbjct: 182 VLKACAALSAIEHGREIHEHVVQTGWEKDVFVG--AALIDMYAKCGCVGSAREVFDKILV 239

Query: 628 EPTAEVWCALLGA 640
              A +W ++L A
Sbjct: 240 R-DAVLWNSMLAA 251


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/682 (35%), Positives = 384/682 (56%), Gaps = 41/682 (6%)

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
           N+  ++   L+      G    A  +   +   D  + +++++ F    L  +A++ +  
Sbjct: 63  NIPSHLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYAS 122

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           L+  G KP     +    A G  G+    KE+H  AI+ G +SD  +GN L+  Y KC C
Sbjct: 123 LRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKC 182

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL--FRTVQLEGLDADVMIIGSVL 369
           V    RVF  +  +D +SWT++ + Y   NC L  L L  F  +   G+  + + + S+L
Sbjct: 183 VEGARRVFDDLVVKDVVSWTSMSSCYV--NCGLPRLGLAVFCEMGWNGVKPNSVTLSSIL 240

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            ACS LK +   + IHG+ +R G+  ++ + +A+V +Y +C ++  +R VF+ +  +DVV
Sbjct: 241 PACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVV 300

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESD--------------------------- 461
           SW  ++++Y  N   ++ L LF  M+   VE+D                           
Sbjct: 301 SWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKM 360

Query: 462 --------SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
                    IT+ S L A S L  L+ GKE++ ++ R     + +  ++LV MYA+CG L
Sbjct: 361 QNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDL 420

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
           +++  VF+ +  KD++ W +MI AN +HG G+  + LF  M      P+ +TF  +L  C
Sbjct: 421 NLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGC 480

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           SHS L+ EG +    M  D+ ++P   HYAC+VD+  RA  L EAY+F++ M +EPTA  
Sbjct: 481 SHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASA 540

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
           W ALLGACRV+ N EL +I A KL E++P NPGNYV + N+   ++ W +  + R+ M+ 
Sbjct: 541 WGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKE 600

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            G+ KTPG SW+++G+++H+F+  DK++ ESD+IY  L E+ EK+ +  GY   T +VL 
Sbjct: 601 RGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKM-KSAGYKPDTDYVLQ 659

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           ++++EEK + L  HSE+LA+A+G+L     S IR+ KNLR+C DCH+  K VS++ G  +
Sbjct: 660 DIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTI 719

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           +VRD+ RFHHF  G CSC D W
Sbjct: 720 IVRDSLRFHHFRNGNCSCQDLW 741



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 219/443 (49%), Gaps = 38/443 (8%)

Query: 108 DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
           DFR+A+QLFD +  + D    +++ISA++  G   EA+ L+  ++  G+  +   F+   
Sbjct: 81  DFRRAQQLFDNI-PQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           +AC  S   +   E+H   ++ G     ++ NALI  Y +C  +  A  V   L  KD V
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           SW SM + +V   L    +  F E+   G KP+ V   + + A   L +L +G+ +H +A
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           ++ G + ++ + + L+ +YA+C  V     VF  M  +D +SW  ++  Y  N  + K L
Sbjct: 260 VRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319

Query: 348 ELFRTVQLEGLDAD-----------------------------------VMIIGSVLMAC 372
            LF  +  +G++AD                                    + I S L AC
Sbjct: 320 ALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPAC 379

Query: 373 SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           S L+ +   KE+H Y+ R  L  DL  + A+V +Y KCG+++ SRNVF+ I  KDVV+W 
Sbjct: 380 SILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWN 439

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           +MI +   +G   E L LF  M ++ ++ +S+T    LS  S   ++++G ++   + R 
Sbjct: 440 TMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRD 499

Query: 492 GF-NLEGSVASSLVDMYARCGAL 513
                + +  + +VD+++R G L
Sbjct: 500 HLVEPDANHYACMVDVFSRAGRL 522



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 235/525 (44%), Gaps = 51/525 (9%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G    A+QLFD + Q    T + ++ A+ + G P   +  Y+ +R  GI      F  V 
Sbjct: 80  GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KAC    D     ++H   ++CG  S  F+ N+L+  Y KC     AR++FD +  K DV
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVK-DV 198

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V W S+ S Y   G     L +F EM   G+  N+ T  + L AC +      G  IH  
Sbjct: 199 VSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGF 258

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY--- 242
            V+ G    V+V +AL+++YARC  + +A  V   + ++D VSWN +LT +  N  Y   
Sbjct: 259 AVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKG 318

Query: 243 -------------------------C-------KAMQFFRELQGAGQKPDQVCTVNAVSA 270
                                    C       KA++  R++Q  G KP+Q+   + + A
Sbjct: 319 LALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPA 378

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
              L +L  GKE+H Y  +   + DL     L+ MYAKC  +N    VF  +  +D ++W
Sbjct: 379 CSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAW 438

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
            T+I   A +    + L LF ++   G+  + +    VL  CS  + + +  +I   + R
Sbjct: 439 NTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGR 498

Query: 391 KGL--SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS---YVHNGLAN 444
             L   D      +VDV+ + G +  +    + +  +   S W +++ +   Y +  LA 
Sbjct: 499 DHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAK 558

Query: 445 -EALELFYLMNEANVESDSITLVSAL------SAASSLSILKKGK 482
             A +LF +  E N   + ++L + L      S AS   IL K +
Sbjct: 559 ISANKLFEI--EPNNPGNYVSLFNILVTAKLWSEASEARILMKER 601



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 173/402 (43%), Gaps = 58/402 (14%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YGKC  V  A ++FD +  + V +W +M   YV+ G P   L  +  M   G+  ++ T 
Sbjct: 177 YGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTL 236

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ AC+ LKDL  G  IHG  ++ G     F+ ++LV++YA+C   ++AR +FD M  
Sbjct: 237 SSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPH 296

Query: 122 KEDVVLWNSIISAY-----------------------------SASGQCLE------ALG 146
           + DVV WN +++AY                             +  G C+E      A+ 
Sbjct: 297 R-DVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVE 355

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           + R+MQ +G   N  T  + L AC       +G E+H    +      +    AL+ MYA
Sbjct: 356 MLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYA 415

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +CG +  +  V   +  KD V+WN+M+     +    + +  F  +  +G KP+ V    
Sbjct: 416 KCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTG 475

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL-------MDMYAKCCCVNYMGRVF 319
            +S              H+  +++G    LQI N++        D     C V+   R  
Sbjct: 476 VLSGCS-----------HSRLVEEG----LQIFNSMGRDHLVEPDANHYACMVDVFSRAG 520

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
               A +FI    +    +     L A  +++ V+L  + A+
Sbjct: 521 RLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISAN 562



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 42/272 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y +C SV  A  +FD +  R V +WN +L AY +N E  + L  +S+M   G+  D  T
Sbjct: 277 LYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEAT 336

Query: 61  FPCVI-----------------------------------KACAMLKDLDCGAKIHGLVL 85
           +  VI                                    AC++L+ L  G ++H  V 
Sbjct: 337 WNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVF 396

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
           +         + +LV MYAKC D   +R +FD +  K DVV WN++I A +  G   E L
Sbjct: 397 RHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRK-DVVAWNTMIIANAMHGNGREVL 455

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN---ALI 202
            LF  M + G+  N+ TF   L  C  S     G++I  +  +   +L    AN    ++
Sbjct: 456 LLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGR--DHLVEPDANHYACMV 513

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
            +++R G++ EA   + ++  + + S W ++L
Sbjct: 514 DVFSRAGRLHEAYEFIQRMPMEPTASAWGALL 545


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/828 (32%), Positives = 442/828 (53%), Gaps = 18/828 (2%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCG 77
           ++ R+ F+WN  +  Y  NG   R LE +  M + G++ D  +   ++ A A L DL  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 78  AKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
              H  V +     +D +V  +++ MY +C     AR+ FD M  + +VV W+++I+AY+
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVR-NVVSWSAMIAAYA 119

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQV 195
             G   +AL LF  M   G+  NA TFV+ L AC       LG  IH   V  G     V
Sbjct: 120 QRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDV 179

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
            + N ++ MY +CG++  A  V  ++E K++V+WN+M+    ++D Y +A     E+   
Sbjct: 180 ILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLD 239

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           G +P+++  V+ + A   + +++ G+ +H     +G  SD  + N L+++Y KC  +   
Sbjct: 240 GLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAA 299

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
                 +  +D ISWTT++A YA++    +A+ + + +  EG+  D     ++L +C  +
Sbjct: 300 RHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAI 359

Query: 376 KCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSM 433
             ++  +EIH  +   G+  D V+  A+VD+YGKCGN D +R  F+ + + +DV  W ++
Sbjct: 360 AALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNAL 419

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           +++YV      E L +F  M+   V  D++T +S L A +SL+ L  G+  +  ++ +G 
Sbjct: 420 LAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGL 479

Query: 494 NLEGSVAS------SLVDMYARCGALDIANKVF---NCVQTKDLILWTSMINANGLHGRG 544
               +VAS      S+++MYA+CG+L  A   F      +  D++ W++M+ A    G  
Sbjct: 480 FDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLS 539

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC 604
           + A+  FY M+ E   PD ++F++ +  CSHSGL+ E   F   +R D+ + P   H+AC
Sbjct: 540 EEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFAC 599

Query: 605 LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGN 664
           LVDLL RA  + EA   +R   +      W  LL ACR + + E    VA +L  L  G+
Sbjct: 600 LVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAARLASLRSGS 659

Query: 665 PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA-RDKSHSE 723
              Y L+++VF  SRKW DV   R  +   G    PG SWIEI N+++ F A  D+    
Sbjct: 660 A--YSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPR 717

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
            +EI+ +L  +  ++ R+ GY       +H+  E+EK  +L  HSE++A+ +G++ + EG
Sbjct: 718 EEEIFAELERLCVEI-RKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEG 776

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           + +RI KN+ VC DCH   K +S +  R + +RD   FH F  G CSC
Sbjct: 777 TPLRIVKNIGVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSC 824



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 159/527 (30%), Positives = 268/527 (50%), Gaps = 20/527 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGSV  A + FD +  R V +W+AM+ AY   G P   LE + RM   G+  +A T
Sbjct: 86  MYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALELFVRMDHEGVKANAIT 145

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ ACA ++ +  G  IH  ++  G    D I+ N++V MY KC +   AR++F+RM
Sbjct: 146 FVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 205

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E ++ V WN++I+A S   +  EA  L  EM   GL  N  T V+ + AC        G
Sbjct: 206 -EAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRG 264

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H      G      VANAL+ +Y +CGK+  A   L  +E +D +SW ++L  + ++
Sbjct: 265 RIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARH 324

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+   + +   G K D    VN + +   +  L  G+E+H    + G   D  + 
Sbjct: 325 GHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQ 384

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             L+DMY KC   +   R F +M+  +D   W  ++A Y   +   + L +F  + L+G+
Sbjct: 385 TALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGV 444

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-------VILNAIVDVYGKCGN 411
             D +   S+L AC+ L  +   +  H  ++ +GL D        ++  +++++Y KCG+
Sbjct: 445 APDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGS 504

Query: 412 IDYSRNVF---ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           +  ++  F       + DVV+W++M+++Y   GL+ EAL  FY M +  V+ DS++ VSA
Sbjct: 505 LADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSA 564

Query: 469 LSAASSLSILKKGKELNGFI--IRKGFNLEGSVA--SSLVDMYARCG 511
           ++  S   ++   +E   F   +R    +  + A  + LVD+ +R G
Sbjct: 565 IAGCSHSGLV---REAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAG 608


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 361/591 (61%), Gaps = 5/591 (0%)

Query: 246  MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
            +QF++ ++    K     T+ +   +  +      K+ HA     G   D +I      M
Sbjct: 705  LQFWQRIKATESKYK---TIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIM 761

Query: 306  YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
            Y     ++    VF  +       W  +I G+A +   L +LEL+  +  +GL  D    
Sbjct: 762  YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821

Query: 366  GSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIES 424
               L +C+GL  + + K IH +++  G S DL +  A+VD+Y KCG+I+ +R VF+ +  
Sbjct: 822  PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAV 881

Query: 425  KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
            +D+VSWTSMIS Y HNG  +E L  F LM  + V  + ++++S L A  +L  L+KG+  
Sbjct: 882  RDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWF 941

Query: 485  NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
            + ++I+ GF  +  VA++++DMY++CG+LD+A  +F+    KDL+ W++MI + G+HG G
Sbjct: 942  HSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHG 1001

Query: 545  KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC 604
            + AIDLF +M      P H+TF  +L ACSHSGL+ EGK + ++M  ++ +     +YAC
Sbjct: 1002 RKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYAC 1061

Query: 605  LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGN 664
            +VDLLGRA  L EA   + +M +EP A +W +LLGACR+H+N +L E +A  L  LDP +
Sbjct: 1062 MVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVH 1121

Query: 665  PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSES 724
             G +VL+SN++AA  +W +VE+VR  M   G  K  G S +E  N++H F   D+SH + 
Sbjct: 1122 AGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQW 1181

Query: 725  DEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGS 784
            +++Y KL E+   + +  GYV  T FVLH++EEE K   L  HSERLAIA+G++ ++ G+
Sbjct: 1182 EKLYAKLEELAAPM-KHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGT 1240

Query: 785  LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             +RITKNLR+C DCH+  KL+S++  R ++VRD +RFH FE GVCSCGDYW
Sbjct: 1241 TLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291



 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/683 (36%), Positives = 400/683 (58%), Gaps = 7/683 (1%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           +++H  V K G     F    L ++YAKC   + AR++FD      +V LWNS + +Y  
Sbjct: 21  SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET-PHPNVHLWNSTLRSYCR 79

Query: 138 SGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQV 195
             Q  E L LF  M    G   + +T   AL+AC       LG  IH    K+ +    +
Sbjct: 80  EKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDM 139

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           +V +AL+ +Y++CG+M EA  V  + +  D+V W SM+TG+ QN+   +A+  F ++   
Sbjct: 140 FVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199

Query: 256 G-QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
                D V  V+ VSA  +L N+  G  +H   I++ F  DL + N+L+++YAK  C   
Sbjct: 200 DCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKI 259

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
              +F +M  +D ISW+T+IA YA N    +AL LF  +  +  + + + + S L AC+ 
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319

Query: 375 LKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
            + + + K+IH   + KG   D  +  A++D+Y KC   D + ++F+ +  KDVVSW ++
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVAL 379

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           +S Y  NG+A +++ +F  M    ++ D++ +V  L+A+S L I ++   L+G+++R GF
Sbjct: 380 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGF 439

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
           N    V +SL+++Y++CG+L  A K+F  +  +D+++W+SMI A G+HGRG  A+++F +
Sbjct: 440 NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQ 499

Query: 554 M-EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           M +  +  P+++TFL++L ACSH+GL+ EG K  + M  DYQL P  EH+  +VDLLGR 
Sbjct: 500 MVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRI 559

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
             L +A   +  M I     VW ALLGACR+H N E+GE  AK L  LDP + G Y+L+S
Sbjct: 560 GQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLS 619

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           N++A   KW +V ++R R++  GLKK  G S +E+   +HSF+A D+ H +S +IY+ L 
Sbjct: 620 NIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLR 679

Query: 733 EITEKLEREGGYVAQTQFVLHNV 755
           ++  ++ +E  Y+    F+LH+ 
Sbjct: 680 KLEAQMGKE-VYIPDLDFLLHDT 701



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 159/548 (29%), Positives = 288/548 (52%), Gaps = 8/548 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
           +Y KC S+  A ++FD+     V  WN+ L +Y    +    L  +  M    G + D F
Sbjct: 45  LYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNF 104

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDR 118
           T P  +KACA L+ L+ G  IHG   K     +D F+ ++LV +Y+KC    +A ++F+ 
Sbjct: 105 TIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEE 164

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFET 177
             ++ D VLW S+++ Y  +    EAL LF +M  +  +V +  T V+ + AC       
Sbjct: 165 F-QRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVK 223

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G  +H   ++   +  + + N+L+ +YA+ G    AA +  ++  KD +SW++M+  + 
Sbjct: 224 AGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYA 283

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            N+   +A+  F E+     +P+ V  V+A+ A     NL  GK++H  A+ +GF  D  
Sbjct: 284 NNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFS 343

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +   L+DMY KC C +    +F ++  +D +SW  +++GYAQN    K++ +FR +  +G
Sbjct: 344 VSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDG 403

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSR 416
           +  D + +  +L A S L    Q   +HGY++R G +  V + A ++++Y KCG++  + 
Sbjct: 404 IQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAV 463

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSL 475
            +F+ +  +DVV W+SMI++Y  +G   EALE+F  ++  + V  +++T +S LSA S  
Sbjct: 464 KLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHA 523

Query: 476 SILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
            ++++G K  +  +       +      +VD+  R G L  A  + N +       +W +
Sbjct: 524 GLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGA 583

Query: 534 MINANGLH 541
           ++ A  +H
Sbjct: 584 LLGACRIH 591



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 214/436 (49%), Gaps = 21/436 (4%)

Query: 152  QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
            QR+    + Y  + +    +  S  +   + HA     G      +      MY    ++
Sbjct: 709  QRIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRI 768

Query: 212  TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
              A+ V   + N  S  WN M+ GF  +  +  +++ + ++   G KPD+     A+ + 
Sbjct: 769  DAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSC 828

Query: 272  GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
              L +L  GK +H + +  G  +DL +   L+DMYAKC  +     VF +M  +D +SWT
Sbjct: 829  AGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWT 888

Query: 332  TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
            ++I+GYA N  + + L  F  ++  G+  + + I SVL+AC  L  + + +  H Y+I+ 
Sbjct: 889  SMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQT 948

Query: 392  GLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
            G   D+++  AI+D+Y KCG++D +R +F+    KD+V W++MI+SY  +G   +A++LF
Sbjct: 949  GFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLF 1008

Query: 451  YLMNEANVESDSITLVSALSAASSLSILKKGK-----ELNGFIIRKGFNLEGSVASSLVD 505
              M +A V    +T    LSA S   +L++GK         F+I +      S  + +VD
Sbjct: 1009 DQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKL----SNYACMVD 1064

Query: 506  MYARCGALDIA-NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
            +  R G L  A + + N     D  +W S++ A  +H      +DL     AE  A DH+
Sbjct: 1065 LLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNN----LDL-----AEKIA-DHL 1114

Query: 565  TFLALLYACSHSGLIN 580
              L  ++A  H  L N
Sbjct: 1115 FHLDPVHAGYHVLLSN 1130



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 168/331 (50%), Gaps = 15/331 (4%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            MY     +  A  +F+ +     F WN M+  + ++G  L  LE YS+M   G+  D F 
Sbjct: 761  MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            FP  +K+CA L DL  G  IH  ++ CG  +  F+  +LV MYAKC D   AR +FD+M 
Sbjct: 821  FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             + D+V W S+IS Y+ +G   E LG F  M+  G++ N  + ++ L AC +      G 
Sbjct: 881  VR-DLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGE 939

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
              H+  +++G    + VA A++ MY++CG +  A  +  +   KD V W++M+  +  + 
Sbjct: 940  WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHG 999

Query: 241  LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
               KA+  F ++  AG +P  V   C ++A S SG    LL   +++   + + FV   +
Sbjct: 1000 HGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG----LLEEGKMYFQLMTEEFVIARK 1055

Query: 298  IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            + N     YA  C V+ +GR      A D I
Sbjct: 1056 LSN-----YA--CMVDLLGRAGQLSEAVDLI 1079



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 191/409 (46%), Gaps = 21/409 (5%)

Query: 41   RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV 100
            R+  T S+ + +G +    T  C            C  K H  +   G      I+    
Sbjct: 710  RIKATESKYKTIGSAPGTDTISC----------FSCLKKTHAKIFAYGLQYDSRILTKFA 759

Query: 101  AMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
             MY        A  +F+ +       LWN +I  ++  G+ L +L L+ +M   GL  + 
Sbjct: 760  IMYVSFNRIDAASIVFEDIPNPCSF-LWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDK 818

Query: 161  YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            + F  AL++C   S    G  IH   V  G +  ++V  AL+ MYA+CG +  A  V  +
Sbjct: 819  FAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDK 878

Query: 221  LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
            +  +D VSW SM++G+  N    + + FF  ++ +G  P++V  ++ + A G LG L  G
Sbjct: 879  MAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG 938

Query: 281  KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
            +  H+Y I+ GF  D+ +   +MDMY+KC  ++    +F +   +D + W+ +IA Y  +
Sbjct: 939  EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIH 998

Query: 341  NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK-----EIHGYIIRKGLSD 395
                KA++LF  +   G+    +    VL ACS    + + K         ++I + LS+
Sbjct: 999  GHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSN 1058

Query: 396  LVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS-YVHNGL 442
               +   VD+ G+ G +  + ++ E++    D   W S++ +  +HN L
Sbjct: 1059 YACM---VDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNL 1104


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/660 (35%), Positives = 389/660 (58%), Gaps = 5/660 (0%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++HA  ++ G     +++N  + +Y++CG++     +  ++  ++ VSW S++TGF  
Sbjct: 94  GKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAH 153

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N  + +A+  F +++  G+   Q    + + A   LG +  G ++H   +K GF  +L +
Sbjct: 154 NSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFV 213

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G+ L DMY+KC  ++   + F +M  +D + WT++I G+ +N    KAL  +  +  + +
Sbjct: 214 GSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDV 273

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D  ++ S L ACS LK  S  K +H  I++ G   +  I NA+ D+Y K G++  + N
Sbjct: 274 FIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASN 333

Query: 418 VFESIESK--DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           VF+ I S    +VS T++I  YV      +AL  F  +    +E +  T  S + A ++ 
Sbjct: 334 VFQ-IHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQ 392

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           + L+ G +L+G +++  F  +  V+S+LVDMY +CG  D + ++F+ ++  D I W +++
Sbjct: 393 AKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLV 452

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
                HG G+ AI+ F  M      P+ +TF+ LL  CSH+G++ +G  +   M   Y +
Sbjct: 453 GVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGV 512

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
            P  EHY+C++DLLGRA  L+EA  F+ +M  EP    WC+ LGAC++H + E  +  A 
Sbjct: 513 VPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAAD 572

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           KL++L+P N G +VL+SN++A  ++W+DV+ +R  ++   + K PG SW++I NK H F 
Sbjct: 573 KLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFG 632

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
             D SH +  EIY+KL  + ++++R  GYV QT+ VL ++++  K ++L+ HSER+A+A+
Sbjct: 633 VEDWSHPQKKEIYEKLDNLLDQIKRI-GYVPQTESVLIDMDDNLKEKLLHYHSERIAVAF 691

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +L    G  I + KNLRVC DCHS  K +S++  R ++VRD +RFHHF  G CSCGDYW
Sbjct: 692 SLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 261/512 (50%), Gaps = 14/512 (2%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D  T   +I+  A  K+L+ G ++H ++++ G     F+ N  + +Y+KC +     +LF
Sbjct: 74  DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           D+M ++ ++V W SII+ ++ + +  EAL  F +M+  G +   +   + LQAC      
Sbjct: 134 DKMSQR-NMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAI 192

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G ++H   VK G   +++V + L  MY++CG++++A     ++  KD+V W SM+ GF
Sbjct: 193 QFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGF 252

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           V+N  + KA+  + ++       DQ    + +SA   L     GK LHA  +K GF  + 
Sbjct: 253 VKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYET 312

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQ--DFISWTTIIAGYAQNNCHLKALELFRTVQ 354
            IGN L DMY+K   +     VF Q+ +     +S T II GY + +   KAL  F  ++
Sbjct: 313 FIGNALTDMYSKSGDMVSASNVF-QIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLR 371

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNID 413
             G++ +     S++ AC+    +    ++HG +++     D  + + +VD+YGKCG  D
Sbjct: 372 RRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFD 431

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           +S  +F+ IE+ D ++W +++  +  +GL   A+E F  M    ++ +++T V+ L   S
Sbjct: 432 HSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCS 491

Query: 474 SLSILKKGKELNGFIIRK---GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
              +++ G  LN F   +   G   +    S ++D+  R G L  A    N +  +  + 
Sbjct: 492 HAGMVEDG--LNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVF 549

Query: 531 -WTSMINANGLHG---RGKVAIDLFYKMEAES 558
            W S + A  +HG   R K A D   K+E E+
Sbjct: 550 GWCSFLGACKIHGDMERAKFAADKLMKLEPEN 581



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 224/446 (50%), Gaps = 17/446 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +    +LFDK+SQR + +W +++  +  N      L ++ +MR+ G     F 
Sbjct: 119 LYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFA 178

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++AC  L  +  G ++H LV+KCG+    F+ ++L  MY+KC +   A + F+ M 
Sbjct: 179 LSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMP 238

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D VLW S+I  +  +G   +AL  + +M    +  + +   + L AC      + G 
Sbjct: 239 CK-DAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGK 297

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK--DSVSWNSMLTGFVQ 238
            +HA  +K G   + ++ NAL  MY++ G M  A+ V +Q+ +     VS  +++ G+V+
Sbjct: 298 SLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNV-FQIHSDCISIVSLTAIIDGYVE 356

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            D   KA+  F +L+  G +P++    + + A      L +G +LH   +K  F  D  +
Sbjct: 357 MDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFV 416

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            +TL+DMY KC   ++  ++F ++   D I+W T++  ++Q+     A+E F  +   GL
Sbjct: 417 SSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGL 476

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             + +   ++L  CS       GL   S  ++I+G + ++        + ++D+ G+ G 
Sbjct: 477 KPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEH-----YSCVIDLLGRAGK 531

Query: 412 IDYSRNVFESIE-SKDVVSWTSMISS 436
           +  + +   ++    +V  W S + +
Sbjct: 532 LKEAEDFINNMPFEPNVFGWCSFLGA 557



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 88/180 (48%), Gaps = 4/180 (2%)

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
           SD+ T+   +   +    L KGK+L+  +IR G      +++  +++Y++CG LD   K+
Sbjct: 73  SDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKL 132

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F+ +  ++++ WTS+I     + R + A+  F +M  E          ++L AC+  G I
Sbjct: 133 FDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAI 192

Query: 580 NEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
             G +    +++C +  + +    + L D+  +   L +A +    M  +  A +W +++
Sbjct: 193 QFGTQVHCLVVKCGFGCELFVG--SNLTDMYSKCGELSDACKAFEEMPCK-DAVLWTSMI 249


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/558 (39%), Positives = 366/558 (65%), Gaps = 4/558 (0%)

Query: 281 KELHAYAIKQGF-VSDLQIGNTLM-DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           +++HA++I+ G  +++  +G  L+  + + C  ++Y  ++F Q+   +  +W T+I GYA
Sbjct: 57  RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
           ++   + ALEL+R + +  ++ D      +L A + L  + + +++H   IR G   LV 
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176

Query: 399 L-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           + N +V +Y  CG+ + +  +FE +  +++V+W S+I+ Y  NG  NEAL LF  M    
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           VE D  T+VS LSA + L  L  G+  + ++++ G +      ++L+D+YA+CG++  A+
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 296

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           KVF+ ++ K ++ WTS+I    ++G GK A++LF ++E +   P  ITF+ +LYACSH G
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCG 356

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           +++EG  + + M+ +Y + P  EHY C+VDLLGRA  +++A++F+++M ++P A VW  L
Sbjct: 357 MVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTL 416

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           LGAC +H +  LGE+   +LL+L+P + G+YVL+SN++A+ ++W DV +VR  M   G+K
Sbjct: 417 LGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVK 476

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           KTPG S +E+ N++H F+  D+SH +++EIY KLAEIT+ L+ E GYV     VL ++EE
Sbjct: 477 KTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLE-GYVPHISNVLADIEE 535

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           EEK   L  HSE++AIA+ ++ +  G  IR+ KNLRVC DCH   KL+S++F RE+VVRD
Sbjct: 536 EEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRD 595

Query: 818 ANRFHHFEAGVCSCGDYW 835
            +RFHHF+ G CSC DYW
Sbjct: 596 RSRFHHFKDGHCSCKDYW 613



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 202/393 (51%), Gaps = 8/393 (2%)

Query: 5   CGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCV 64
           C  +  A Q+F ++    +FTWN M+  Y  +  P+  LE Y +M V  I  D  T+P +
Sbjct: 87  CSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFL 146

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           +KA A L D+  G K+H + ++ G++S  F+ N+LV MYA C     A +LF+ M E+ +
Sbjct: 147 LKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAER-N 205

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           +V WNS+I+ Y+ +G+  EAL LFREM   G+  + +T V+ L AC +     LG   H 
Sbjct: 206 LVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHV 265

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             VK G +  ++  NAL+ +YA+CG + +A  V  ++E K  VSW S++ G   N    +
Sbjct: 266 YMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKE 325

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLM 303
           A++ F+EL+  G  P ++  V  + A    G +  G +      ++ G V  ++    ++
Sbjct: 326 ALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMV 385

Query: 304 DMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRT--VQLEGLDA 360
           D+  +   V         M  Q + + W T++ G    + HL   E+ R   +QLE   +
Sbjct: 386 DLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLL-GACTIHGHLALGEVARAQLLQLEPKHS 444

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
              ++ S L A    +  S   ++   ++R+G+
Sbjct: 445 GDYVLLSNLYASE--QRWSDVHKVRRTMLREGV 475



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 236/498 (47%), Gaps = 43/498 (8%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFP-----CVIKACAMLKDLDCGA------KIHGLVLK 86
           +PL  + T+S  +    ++   T P      ++K C  L  L C +      +IH   ++
Sbjct: 9   QPL--IPTHSPRKHFSFTISTSTCPESPKSYILKKCIALL-LSCASSKFKFRQIHAFSIR 65

Query: 87  CGYDSTD-----FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQC 141
            G   T+     +++ +L++    C     A Q+F ++ +  ++  WN++I  Y+ S   
Sbjct: 66  HGVPLTNPDMGKYLIFTLLSF---CSPMSYAHQIFSQI-QNPNIFTWNTMIRGYAESENP 121

Query: 142 LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANAL 201
           + AL L+R+M    +  + +T+   L+A         G ++H+  +++G    V+V N L
Sbjct: 122 MPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTL 181

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           + MYA CG    A  +   +  ++ V+WNS++ G+  N    +A+  FRE+   G +PD 
Sbjct: 182 VHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDG 241

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
              V+ +SA   LG L  G+  H Y +K G   +L  GN L+D+YAKC  +    +VF +
Sbjct: 242 FTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDE 301

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------G 374
           M  +  +SWT++I G A N    +ALELF+ ++ +GL    +    VL ACS       G
Sbjct: 302 MEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEG 361

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSM 433
                + KE +G + +     +     +VD+ G+ G +  +    +++    + V W ++
Sbjct: 362 FDYFKRMKEEYGIVPK-----IEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTL 416

Query: 434 ISS-YVHNGLA-NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           + +  +H  LA  E      L  E     D + L +  ++    S + K +     ++R+
Sbjct: 417 LGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRT---MLRE 473

Query: 492 GFNLEGSVASSLVDMYAR 509
           G  ++ +   SLV++  R
Sbjct: 474 G--VKKTPGHSLVELRNR 489



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 96/170 (56%), Gaps = 1/170 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG    A +LF+ +++R + TWN+++  Y  NG P   L  +  M + G+  D FT
Sbjct: 184 MYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFT 243

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA L  L  G + H  ++K G D      N+L+ +YAKC   R+A ++FD M 
Sbjct: 244 MVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEME 303

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
           EK  VV W S+I   + +G   EAL LF+E++R GL+ +  TFV  L AC
Sbjct: 304 EK-SVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYAC 352


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 260/773 (33%), Positives = 433/773 (56%), Gaps = 16/773 (2%)

Query: 77  GAKIHGLV-----LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           G+ IHG +     +K  ++   F++N+ + +Y+K  +   A++LFDRM E+  V+ +N +
Sbjct: 23  GSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERS-VISYNIL 81

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           IS Y   G   +A+GLF E +   L  + +++   L AC       LG  IH   +  G 
Sbjct: 82  ISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGL 141

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
             QV++ N LI MY +C ++  A  +    +  D+VSWNS++TG+ +   Y + ++   +
Sbjct: 142 GQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVK 201

Query: 252 LQGAGQKPDQVCTVNAV-SASGRLGNLLN-GKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           +   G + +     +A+ S    L N+++ GK LH Y +KQG   D+ +G  L+DMYAK 
Sbjct: 202 MHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKT 261

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN-----CHLKALELFRTVQLEGLDADVMI 364
             +    ++F     Q+ + +  +IAG+ Q       C  +AL+LF  +Q +G+      
Sbjct: 262 GYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFT 321

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
             S++  C+ ++     K+IH +I +  + SD  I + ++++Y   G+ +     F S  
Sbjct: 322 FSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTP 381

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
             D+VSWT+MI+ Y  NG    AL LFY +  +  + D   + + LSA + ++  + G++
Sbjct: 382 KLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQ 441

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++G+ ++ G      V +S + MYA+ G LD A   F  ++  D++ W+ MI +N  HG 
Sbjct: 442 VHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGH 501

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
            K AI+LF  M++    P+ ITFL +L ACSH GL+ EG ++ E M+ DY +    +H  
Sbjct: 502 AKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCT 561

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C+VDLL RA  L +A  F+ +        +W  LL  CR++ +   G+ VA+KL+ELDP 
Sbjct: 562 CIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQ 621

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
              +YVL+ N++  +       ++R  M+  G++K PG SWIE+GN++HSF+  D SH  
Sbjct: 622 ESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPM 681

Query: 724 SDEIYKKLAEITEKLEREGGYVAQ-TQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE 782
           S  IYKKL  + EK +R+ GY+ Q  Q V  + +E +    +  HSE+LA+++G++    
Sbjct: 682 SQIIYKKLEGMLEK-KRKIGYIDQKIQNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLPP 740

Query: 783 GSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            + +++ KNLRVC DCH+  KL+S +  RE+++RD+ RFHHF+ G CSC DYW
Sbjct: 741 SAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDYW 793



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 173/547 (31%), Positives = 295/547 (53%), Gaps = 13/547 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G + +A++LFD++S+R+V ++N ++  Y   G   + +  +S  R+  + +D F++
Sbjct: 54  YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ AC  +KD   G  IHGL + CG     F+ N L+ MY KC     AR LF+   E
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC--EDSSFETLG 179
            ++V  WNS+I+ Y+  G   E L L  +M   GL  NA+T  +AL++C    ++  + G
Sbjct: 174 LDNVS-WNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYG 232

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H  TVK G +L + V  AL+ MYA+ G + +A  +     N++ V +N+M+ GF+Q 
Sbjct: 233 KTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQT 292

Query: 240 ---DLYC--KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
              D  C  +A++ F ++Q  G KP      + +     +     GK++HA+  K    S
Sbjct: 293 EDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQS 352

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D  IG+TL+++Y+         + F      D +SWTT+IAGYAQN     AL LF  + 
Sbjct: 353 DEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELL 412

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNID 413
             G   D  II ++L AC+ +      +++HGY ++ G+  L I+ N+ + +Y K GN+D
Sbjct: 413 ASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLD 472

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            ++  FE I++ DVVSW+ MI S   +G A +A+ LF LM    +  + IT +  L+A S
Sbjct: 473 SAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACS 532

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGA-LDIANKVFNCVQTKDLIL 530
              ++++G       ++K ++++ +V   + +VD+ +R G  LD  N + N       ++
Sbjct: 533 HGGLVEEGLRYYES-MKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVM 591

Query: 531 WTSMINA 537
           W ++++ 
Sbjct: 592 WRTLLSG 598



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 214/423 (50%), Gaps = 10/423 (2%)

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
           AYT +    +   SS    G   HA  +K+  N  +++ N  + +Y++ G+M  A  +  
Sbjct: 11  AYTKLVQFSSKSGSSIH--GKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFD 68

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
           ++  +  +S+N +++G+     Y KA+  F E + A  K D+      +SA G++ +   
Sbjct: 69  RMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFAL 128

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GK +H  AI  G    + + N L+DMY KC  +++   +F      D +SW ++I GYA+
Sbjct: 129 GKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYAR 188

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-GLKCM-SQTKEIHGYIIRKGLS-DL 396
              + + L+L   +   GL  +   +GS L +C   L  M S  K +HGY +++GL  D+
Sbjct: 189 VGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDI 248

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN-----GLANEALELFY 451
           V+  A++D+Y K G +  +  +F +  +++VV + +MI+ ++         A EAL+LF 
Sbjct: 249 VVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFS 308

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
            M    ++    T  S +   + +   + GK+++  I +     +  + S+L+++Y+  G
Sbjct: 309 QMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLG 368

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
           + +   K FN     D++ WT+MI     +G+ + A+ LFY++ A    PD      +L 
Sbjct: 369 STEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLS 428

Query: 572 ACS 574
           AC+
Sbjct: 429 ACA 431



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 175/335 (52%), Gaps = 12/335 (3%)

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D V     V  S + G+ ++GK  HA+ IK  F   L + N  +++Y+K   +    ++F
Sbjct: 8   DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
            +M+ +  IS+  +I+GY     + KA+ LF   ++  L  D      VL AC  +K  +
Sbjct: 68  DRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFA 127

Query: 380 QTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             K IHG  I  GL   V L N ++D+Y KC  ID++R +FES +  D VSW S+I+ Y 
Sbjct: 128 LGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYA 187

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAA--SSLSILKKGKELNGFIIRKGFNLE 496
             G   E L+L   M+   +  ++ TL SAL +   +  +++  GK L+G+ +++G +L+
Sbjct: 188 RVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLD 247

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV-------AID 549
             V ++L+DMYA+ G L  A ++F     ++++++ +MI   G      +       A+ 
Sbjct: 248 IVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMI--AGFIQTEDIDKECAYEALK 305

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           LF +M+ +   P   TF +++  C+H      GK+
Sbjct: 306 LFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQ 340


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/729 (34%), Positives = 412/729 (56%), Gaps = 20/729 (2%)

Query: 111 KARQLFDRMGE-KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA 169
           K    F+ +G    +V  W  + ++Y +       +  F +   V  + +     A L++
Sbjct: 59  KPNSNFEGLGPMSREVAFWLQLFTSYQS------GVPKFHQFSSVPDLKHLLNNAAKLKS 112

Query: 170 CEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSV 227
            + ++      +IH+  V +  +  +   N L+ +YA+CG +     +   Y   + + V
Sbjct: 113 LKHAT------QIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVV 166

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           +W +++    +++   +A+ FF  ++  G  P+       + A      L  G+++HA  
Sbjct: 167 TWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALI 226

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
            K  F++D  +   L+DMYAKC  +     VF +M  ++ +SW ++I G+ +N  + +A+
Sbjct: 227 HKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAI 286

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVY 406
            +FR V    L  D + I SVL AC+GL  +   K++HG I+++GL  LV + N++VD+Y
Sbjct: 287 GVFREVL--SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMY 344

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            KCG  + +  +F     +DVV+W  MI          +A   F  M    VE D  +  
Sbjct: 345 CKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYS 404

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           S   A++S++ L +G  ++  +++ G      ++SSLV MY +CG++  A +VF   +  
Sbjct: 405 SLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEH 464

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           +++ WT+MI     HG    AI LF +M  E   P++ITF+++L ACSH+G I++G K+ 
Sbjct: 465 NVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYF 524

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
             M   + + P  EHYAC+VDLLGR   LEEA +F+ SM  EP + VW ALLGAC  H+N
Sbjct: 525 NSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHAN 584

Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            E+G  VA++L +L+P NPGNY+L+SN++      ++ ++VR  M  +G++K  G SWI+
Sbjct: 585 VEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWID 644

Query: 707 IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
           + N+   F A D+SHS + EIY  L ++ E ++R  GYVA+TQF  ++VE  E+ Q L+ 
Sbjct: 645 VKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRR-GYVAETQFATNSVEGSEE-QSLWC 702

Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
           HSE+LA+A+G+L    GS +RI KNLR C DCH+  K  S +F RE++VRD NRFH F  
Sbjct: 703 HSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTN 762

Query: 827 GVCSCGDYW 835
           G CSC DYW
Sbjct: 763 GSCSCMDYW 771



 Score =  243 bits (620), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 173/576 (30%), Positives = 282/576 (48%), Gaps = 59/576 (10%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++   A LK L    +IH  ++     ++   +N+L+ +YAKC        LF+      
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162

Query: 124 -DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            +VV W ++I+  S S +  +AL  F  M+  G+  N +TF A L AC  ++  + G +I
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA   K       +VA AL+ MYA+CG M  A  V  ++ +++ VSWNSM+ GFV+N LY
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLY 282

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A+  FRE+   G  PDQV   + +SA   L  L  GK++H   +K+G V  + + N+L
Sbjct: 283 GRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSL 340

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMY KC       ++F     +D ++W  +I G  +     +A   F+ +  EG++ D 
Sbjct: 341 VDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDE 400

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFES 421
               S+  A + +  ++Q   IH ++++ G + +  I +++V +YGKCG++  +  VF  
Sbjct: 401 ASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRE 460

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
            +  +VV WT+MI+ +  +G ANEA++LF  M    V  + IT VS LSA S       G
Sbjct: 461 TKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACS-----HTG 515

Query: 482 KELNGFIIRKGFNLEGSVA---------SSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           K  +GF   K FN   +V          + +VD+  R G L+ A +              
Sbjct: 516 KIDDGF---KYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRF------------- 559

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
                                +E+  F PD + + ALL AC     +  G++  E +   
Sbjct: 560 ---------------------IESMPFEPDSLVWGALLGACGKHANVEMGREVAERL--- 595

Query: 593 YQLDP-WPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
           ++L+P  P +Y  L ++  R   LEEA +  R M I
Sbjct: 596 FKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGI 631



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 222/446 (49%), Gaps = 18/446 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRT--VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           +Y KCGS+     LF+     +  V TW  ++     + +P + L  ++RMR  GI  + 
Sbjct: 141 LYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNH 200

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           FTF  ++ ACA    L  G +IH L+ K  + +  F+  +L+ MYAKC     A  +FD 
Sbjct: 201 FTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDE 260

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  + ++V WNS+I  +  +     A+G+FRE+  +G   +  +  + L AC        
Sbjct: 261 MPHR-NLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDF 317

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++H + VK G    VYV N+L+ MY +CG   +A  +     ++D V+WN M+ G  +
Sbjct: 318 GKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFR 377

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
              + +A  +F+ +   G +PD+    +   AS  +  L  G  +H++ +K G V + +I
Sbjct: 378 CRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRI 437

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            ++L+ MY KC  +    +VF +    + + WT +I  + Q+ C  +A++LF  +  EG+
Sbjct: 438 SSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGV 497

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             + +   SVL ACS       G K  +    +H   I+ GL        +VD+ G+ G 
Sbjct: 498 VPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHN--IKPGLEHYA---CMVDLLGRVGR 552

Query: 412 IDYSRNVFESIE-SKDVVSWTSMISS 436
           ++ +    ES+    D + W +++ +
Sbjct: 553 LEEACRFIESMPFEPDSLVWGALLGA 578


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/559 (39%), Positives = 357/559 (63%), Gaps = 4/559 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +HA+ IK  +   + +   L+ +Y KC C+    RV  +M  ++ +SWT +I+GY+Q
Sbjct: 29  GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQ 88

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVI 398
                +AL LF  + + G   +     +VL +C+        ++IH  +I+    S + +
Sbjct: 89  RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 148

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            ++++D+Y K G I  +R VF+ +  +DVVS T++IS Y   GL  EAL+LF  +    +
Sbjct: 149 GSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGM 208

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
            S+ +T  S L+A S L+ L  G++++  ++R        + +SL+DMY++CG+L  + +
Sbjct: 209 RSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRR 268

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSG 577
           +F+ +  + +I W +M+     HG G+ A++LF  M+ E+   PD +TFLA+L  CSH G
Sbjct: 269 IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG 328

Query: 578 LINEGKK-FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           + + G + F E++      +P  EHY C+VDL GRA  +EEA++F++ M  EPTA +W +
Sbjct: 329 MEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGS 388

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LLGACRVH N  +GE VA++LLE++  N GNYV++SN++A++ +W DV  VR  M+   +
Sbjct: 389 LLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAV 448

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
            K PG SWIE+   +H+F A D+SH   +E++ K+ E++ K+ +E GYV +   VL++V+
Sbjct: 449 IKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKI-KEAGYVPELSCVLYDVD 507

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           +E+K ++L GHSE+LA+A+G++ +  G+ +RI KNLR+CVDCH+F K +SR++GRE+ +R
Sbjct: 508 DEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLR 567

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D NRFHH   G CSCGDYW
Sbjct: 568 DKNRFHHIVGGTCSCGDYW 586



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 206/393 (52%), Gaps = 6/393 (1%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M + G+ V+   +  V+  C     +  G ++H  ++K  Y+   ++   L+ +Y KC  
Sbjct: 1   MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              AR++ D M E+ +VV W ++IS YS  G   EAL LF EM   G   N +TF   L 
Sbjct: 61  LGDARRVLDEMPER-NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 119

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           +C  SS   LG +IH+  +K+     ++V ++L+ MYA+ GK+ EA  V   L  +D VS
Sbjct: 120 SCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS 179

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
             ++++G+ Q  L  +A+  FR LQ  G + + V   + ++A   L  L +G+++H++ +
Sbjct: 180 CTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVL 239

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           +      + + N+L+DMY+KC  + Y  R+F  M  +  ISW  ++ GY+++    +A+E
Sbjct: 240 RAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVE 299

Query: 349 LFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGL-SDLVILNAIVD 404
           LF+ ++ E  +  D +   +VL  CS      +  EI   ++  + G   ++     +VD
Sbjct: 300 LFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVD 359

Query: 405 VYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
           ++G+ G ++ +    + +  +   + W S++ +
Sbjct: 360 LFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 392



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 198/382 (51%), Gaps = 12/382 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  + DA ++ D++ +R V +W AM+  Y   G     L  +  M + G + + FT
Sbjct: 54  LYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFT 113

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ +C        G +IH LV+K  ++S  F+ +SL+ MYAK     +AR++FD + 
Sbjct: 114 FATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DVV   +IIS Y+  G   EAL LFR +QR G+ +N  T+ + L A    +    G 
Sbjct: 174 ER-DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR 232

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  +++     V + N+LI MY++CG +T +  +   +  +  +SWN+ML G+ ++ 
Sbjct: 233 QVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG 292

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GFVSDLQ 297
           L  +A++ F+ ++   + KPD V  +  +S     G    G E+    + Q  GF  +++
Sbjct: 293 LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIE 352

Query: 298 IGNTLMDMYAKCCCV----NYMGRVFYQMTAQDFISWTTII-AGYAQNNCHLKALELFRT 352
               ++D++ +   V     ++ ++ ++ TA     W +++ A     N H+      R 
Sbjct: 353 HYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAA---IWGSLLGACRVHQNVHIGEFVARRL 409

Query: 353 VQLEGLDADVMIIGSVLMACSG 374
           +++E  +A   +I S L A +G
Sbjct: 410 LEIESENAGNYVILSNLYASAG 431



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 61/118 (51%)

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           S L+   S + +++G+ ++  +I+  +     + + L+ +Y +C  L  A +V + +  +
Sbjct: 15  SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           +++ WT+MI+     G    A+ LF +M     AP+  TF  +L +C+ S     G++
Sbjct: 75  NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/741 (33%), Positives = 407/741 (54%), Gaps = 39/741 (5%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N +++ YA   +  +AR+LF+      + + W+S++S Y  +G  +E L  F +M   G 
Sbjct: 72  NIMISAYANLGNLVEARKLFNET-PIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQ 130

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YT  + L+AC   S    G  IH   +K      ++VA  L+ MY++C  + EA  
Sbjct: 131 KPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEY 190

Query: 217 VLYQL-ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
           + + L + K+ V W +MLTG+ QN    KA+Q F+E++  G + +     + ++A   + 
Sbjct: 191 LFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSIS 250

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
               G+++H   I  GF  ++ + + L+DMYAKC  +     +   M   D + W ++I 
Sbjct: 251 AYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIV 310

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           G   +    +AL LF  +    +  D     SVL + +  K +   + +H   I+ G   
Sbjct: 311 GCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDA 370

Query: 396 L-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
              + NA+VD+Y K GN+  + +VF  I  KDV+SWTS+++ YVHNG   +AL+LF  M 
Sbjct: 371 CKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMR 430

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
            A V+ D   +    SA + L++++ G++++   I+       S  +SL+ MYA+CG L+
Sbjct: 431 TARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLE 490

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A +V + ++T+++I WT                                   A++   +
Sbjct: 491 DAIRVXDSMETRNVISWT-----------------------------------AIIVGYA 515

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
            +GL+  G+ + E M   Y + P  + YAC++DLLGRA  + EA   +  M +EP A +W
Sbjct: 516 QNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIW 575

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            +LL ACRVH N ELGE   K L++L+P N   YVL+SN+F+ + +W+D   +R  M+  
Sbjct: 576 KSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTM 635

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           G+ + PG SWIE+ +++H+FI+ D+SH  + EIY K+ E+   L +E G+V    F L +
Sbjct: 636 GIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMM-ILIKEAGHVPDMNFALRD 694

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           ++EE K + L  HSE+LA+A+G+L   +G+ IRI KNLRVC DCHS  K +S +F R ++
Sbjct: 695 MDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHII 754

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RD N FHHF  G CSCGD+W
Sbjct: 755 LRDLNCFHHFIEGKCSCGDFW 775



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 157/565 (27%), Positives = 282/565 (49%), Gaps = 39/565 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G++++A +LF++       TW++++  Y  NG  +  L  +S+M   G     +T 
Sbjct: 78  YANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTL 137

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V++AC+ L  L  G  IH   +K   ++  F+   LV MY+KC    +A  LF  + +
Sbjct: 138 GSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPD 197

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           +++ V W ++++ Y+ +G+ L+A+  F+EM+  G+ +N +TF + L AC   S    G +
Sbjct: 198 RKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQ 257

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   + SG    VYV +AL+ MYA+CG +  A  +L  +E  D V WNSM+ G V +  
Sbjct: 258 VHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGY 317

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F ++     + D     + + +     NL  G+ +H+  IK GF +   + N 
Sbjct: 318 MEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNA 377

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAK   ++    VF ++  +D ISWT+++ GY  N  H KAL+LF  ++   +D D
Sbjct: 378 LVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLD 437

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFE 420
             ++  V  AC+ L  +   +++H   I+     L+   N+++ +Y KCG ++ +  V +
Sbjct: 438 QFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXD 497

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
           S+E+++V+SWT++I  Y  NGL       F          +S+  V  +  AS       
Sbjct: 498 SMETRNVISWTAIIVGYAQNGLVETGQSYF----------ESMEKVYGIKPASDR----- 542

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANG 539
                               + ++D+  R G ++ A  + N +  + D  +W S+++A  
Sbjct: 543 -------------------YACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACR 583

Query: 540 LHGR---GKVAIDLFYKMEAESFAP 561
           +HG    G+ A     K+E  +  P
Sbjct: 584 VHGNLELGERAGKNLIKLEPSNSLP 608



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 220/394 (55%), Gaps = 8/394 (2%)

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           Y  N +I+ YA  G + EA  +  +    +S++W+S+++G+ +N    + ++ F ++   
Sbjct: 69  YTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSD 128

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           GQKP Q    + + A   L  L  GK +H YAIK    +++ +   L+DMY+KC C+   
Sbjct: 129 GQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEA 188

Query: 316 GRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             +F+ +   ++++ WT ++ GYAQN   LKA++ F+ ++ +G++++     S+L AC+ 
Sbjct: 189 EYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTS 248

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +   +  +++HG II  G   ++ + +A+VD+Y KCG++  +R + +++E  DVV W SM
Sbjct: 249 ISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSM 308

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I   V +G   EAL LF+ M+  ++  D  T  S L + +S   LK G+ ++   I+ GF
Sbjct: 309 IVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGF 368

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---NGLHGRGKVAIDL 550
           +   +V+++LVDMYA+ G L  A  VFN +  KD+I WTS++     NG H +   A+ L
Sbjct: 369 DACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEK---ALQL 425

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           F  M       D      +  AC+   +I  G++
Sbjct: 426 FCDMRTARVDLDQFVVACVFSACAELTVIEFGRQ 459



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/341 (36%), Positives = 189/341 (55%), Gaps = 2/341 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFT-WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KC  +L+AE LF  +  R  +  W AML  Y  NGE L+ ++ +  MR  G+  + F
Sbjct: 178 MYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHF 237

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP ++ AC  +     G ++HG ++  G+    ++ ++LV MYAKC D   AR + D M
Sbjct: 238 TFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTM 297

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E +DVV WNS+I      G   EAL LF +M    +  + +T+ + L++        +G
Sbjct: 298 -EIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIG 356

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H+ T+K+G +    V+NAL+ MYA+ G ++ A  V  ++ +KD +SW S++TG+V N
Sbjct: 357 ESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHN 416

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             + KA+Q F +++ A    DQ       SA   L  +  G+++HA  IK    S L   
Sbjct: 417 GFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAE 476

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           N+L+ MYAKC C+    RV   M  ++ ISWT II GYAQN
Sbjct: 477 NSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQN 517



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 150/286 (52%), Gaps = 8/286 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A  + D +    V  WN+M+   V++G     L  + +M    I +D FT
Sbjct: 280 MYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFT 339

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P V+K+ A  K+L  G  +H L +K G+D+   + N+LV MYAK  +   A  +F+++ 
Sbjct: 340 YPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKIL 399

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K DV+ W S+++ Y  +G   +AL LF +M+   +  + +       AC + +    G 
Sbjct: 400 DK-DVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGR 458

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +KS     +   N+LI MYA+CG + +A  V   +E ++ +SW +++ G+ QN 
Sbjct: 459 QVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNG 518

Query: 241 LYCKAMQFFRELQGA-GQKPDQ---VCTVNAVSASGRLG---NLLN 279
           L      +F  ++   G KP      C ++ +  +G++    +LLN
Sbjct: 519 LVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLN 564



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 38/296 (12%)

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF--------- 450
           N ++    K G +D +R +F+ +  +D  +W  MIS+Y + G   EA +LF         
Sbjct: 41  NQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSI 100

Query: 451 --------YLMNEANVE--------------SDSITLVSALSAASSLSILKKGKELNGFI 488
                   Y  N   VE                  TL S L A S+LS+L  GK ++ + 
Sbjct: 101 TWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYA 160

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKV-FNCVQTKDLILWTSMINANGLHGRGKVA 547
           I+        VA+ LVDMY++C  L  A  + F+    K+ + WT+M+     +G    A
Sbjct: 161 IKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKA 220

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY--ACL 605
           I  F +M  +    +H TF ++L AC+       G+   ++  C       P  Y  + L
Sbjct: 221 IQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGR---QVHGCIIWSGFGPNVYVQSAL 277

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           VD+  +   L  A   + +M+I+     W +++  C  H   E   ++  K+   D
Sbjct: 278 VDMYAKCGDLASARMILDTMEIDDVV-CWNSMIVGCVTHGYMEEALVLFHKMHNRD 332


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/638 (38%), Positives = 376/638 (58%), Gaps = 40/638 (6%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           L+  YA  G+   A  V   +  ++ + +N M+  ++ N LY  A+  FR++   G  PD
Sbjct: 73  LMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPD 132

Query: 261 Q---VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
                C + A S S    NL  G +LH    K G   +L +GN L+ +Y KC C+     
Sbjct: 133 HYTYPCVLKACSCSD---NLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARC 189

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           V  +M ++D +SW +++AGYAQN     AL++ R +       D   + S+L A +    
Sbjct: 190 VLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTN--- 246

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
                                            N+ Y   +F ++E K +VSW  MIS Y
Sbjct: 247 -----------------------------TSSENVLYVEEMFMNLEKKSLVSWNVMISVY 277

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           + N +  ++++L+  M +  VE D+IT  S L A   LS L  G+ ++ ++ RK      
Sbjct: 278 MKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNM 337

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            + +SL+DMYARCG L+ A +VF+ ++ +D+  WTS+I+A G+ G+G  A+ LF +M+  
Sbjct: 338 LLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNS 397

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
             +PD I F+A+L ACSHSGL+NEGK + + M  DY++ P  EH+ACLVDLLGR+  ++E
Sbjct: 398 GQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDE 457

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           AY  ++ M ++P   VW ALL +CRV+SN ++G + A KLL+L P   G YVL+SN++A 
Sbjct: 458 AYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAK 517

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           + +W +V  +R  M+   ++K PG S +E+ N++H+F+A D  H +S EIY++L+ +  K
Sbjct: 518 AGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGK 577

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVD 797
           + +E GYV +T   LH+VEEE+K   L  HSE+LAI + +L + E S IRITKNLRVC D
Sbjct: 578 M-KELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCGD 635

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CH   KL+S++  RE+V+RD NRFHHF+ G+CSCGDYW
Sbjct: 636 CHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 257/522 (49%), Gaps = 63/522 (12%)

Query: 34  VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD 93
           VS   P+ VLE      +LG  +D +             D+     +H  V    +    
Sbjct: 26  VSPQNPVLVLE------LLGKVLDQYP------------DIKTLKNVHSKVFNLSFHENP 67

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
            +   L+  YA   +   AR +FD + E+ +V+ +N +I +Y  +    +AL +FR+M  
Sbjct: 68  SLGIKLMRAYAARGEPGLARNVFDVIPER-NVIFYNVMIRSYMNNHLYDDALLVFRDMVS 126

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G   + YT+   L+AC  S    +G+++H A  K G +L ++V N LIA+Y +CG + E
Sbjct: 127 GGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPE 186

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  VL ++++KD VSWNSM+ G+ QN  +  A+   RE+ G  QKPD  CT+ ++  +  
Sbjct: 187 ARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPD-ACTMASLLPA-- 243

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
                              V++    N L           Y+  +F  +  +  +SW  +
Sbjct: 244 -------------------VTNTSSENVL-----------YVEEMFMNLEKKSLVSWNVM 273

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           I+ Y +N+   K+++L+  +    ++ D +   SVL AC  L  +   + IH Y+ RK L
Sbjct: 274 ISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKL 333

Query: 394 -SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
             ++++ N+++D+Y +CG ++ ++ VF+ ++ +DV SWTS+IS+Y   G    A+ LF  
Sbjct: 334 CPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTE 393

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK---GFNLEGSVA--SSLVDMY 507
           M  +    DSI  V+ LSA S   +L +GK    F  ++    + +   +   + LVD+ 
Sbjct: 394 MQNSGQSPDSIAFVAILSACSHSGLLNEGK----FYFKQMTDDYKITPIIEHFACLVDLL 449

Query: 508 ARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAI 548
            R G +D A  +   +  K +  +W +++++  ++    + I
Sbjct: 450 GRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGI 491



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 213/433 (49%), Gaps = 45/433 (10%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +FD + +R V  +N M+ +Y++N      L  +  M   G S D +T+PCV+KAC+ 
Sbjct: 86  ARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSC 145

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
             +L  G ++HG V K G D   F+ N L+A+Y KC    +AR + D M  K DVV WNS
Sbjct: 146 SDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSK-DVVSWNS 204

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +++ Y+ + Q  +AL + REM  V    +A T  + L A  ++S E +            
Sbjct: 205 MVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENV------------ 252

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               +YV    +                  LE K  VSWN M++ +++N +  K++  + 
Sbjct: 253 ----LYVEEMFM-----------------NLEKKSLVSWNVMISVYMKNSMPGKSVDLYL 291

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           ++     +PD +   + + A G L  LL G+ +H Y  ++    ++ + N+L+DMYA+C 
Sbjct: 292 QMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCG 351

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
           C+    RVF +M  +D  SWT++I+ Y        A+ LF  +Q  G   D +   ++L 
Sbjct: 352 CLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILS 411

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI------VDVYGKCGNIDYSRNVFESIES 424
           ACS    +++ K    +  ++   D  I   I      VD+ G+ G +D + N+ + +  
Sbjct: 412 ACSHSGLLNEGK----FYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPM 467

Query: 425 K-DVVSWTSMISS 436
           K +   W +++SS
Sbjct: 468 KPNERVWGALLSS 480



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 119/231 (51%), Gaps = 5/231 (2%)

Query: 7   SVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIK 66
           +VL  E++F  + ++++ +WN M+  Y+ N  P + ++ Y +M    +  DA T   V++
Sbjct: 251 NVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLR 310

Query: 67  ACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVV 126
           AC  L  L  G +IH  V +        + NSL+ MYA+C     A+++FDRM  + DV 
Sbjct: 311 ACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFR-DVA 369

Query: 127 LWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
            W S+ISAY  +GQ   A+ LF EMQ  G   ++  FVA L AC  S     G + +   
Sbjct: 370 SWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEG-KFYFKQ 428

Query: 187 VKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLT 234
           +     +   + +   L+ +  R G++ EA  ++ Q+  K +   W ++L+
Sbjct: 429 MTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLS 479



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 4/214 (1%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNVFESI 422
           ++G VL     +K +   K +H  +      +   L   ++  Y   G    +RNVF+ I
Sbjct: 37  LLGKVLDQYPDIKTL---KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVI 93

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             ++V+ +  MI SY++N L ++AL +F  M       D  T    L A S    L+ G 
Sbjct: 94  PERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGL 153

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           +L+G + + G +L   V + L+ +Y +CG L  A  V + +Q+KD++ W SM+     + 
Sbjct: 154 QLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNM 213

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
           +   A+D+  +M+     PD  T  +LL A +++
Sbjct: 214 QFDDALDICREMDGVRQKPDACTMASLLPAVTNT 247



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 69/136 (50%), Gaps = 3/136 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG + DA+++FD++  R V +W +++ AY   G+    +  ++ M+  G S D+  
Sbjct: 346 MYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIA 405

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN--SLVAMYAKCYDFRKARQLFDR 118
           F  ++ AC+    L+ G K +   +   Y  T  I +   LV +  +     +A  +  +
Sbjct: 406 FVAILSACSHSGLLNEG-KFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQ 464

Query: 119 MGEKEDVVLWNSIISA 134
           M  K +  +W +++S+
Sbjct: 465 MPMKPNERVWGALLSS 480


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/689 (35%), Positives = 398/689 (57%), Gaps = 35/689 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYAR--CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IH+ T+ +G      V   +IA   +   G M  A  V   +   +   WN+M+ G+ +
Sbjct: 37  QIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSR 96

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                 A+  + E+   G  PD+      +    R   +  G+ELH + +K GF S++ +
Sbjct: 97  VGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFV 156

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+ +Y+    V+    VF + +  D ++W  +I+GY ++    ++++LF  ++   +
Sbjct: 157 QNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRV 216

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRN 417
               + + SVL ACS LK ++  K +H Y+    +  + +L NA++D+Y  CG++D +  
Sbjct: 217 LPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALG 276

Query: 418 VFESIESKDVVS-------------------------------WTSMISSYVHNGLANEA 446
           +F++++S+DV+S                               WT+MI  Y+      E 
Sbjct: 277 IFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEV 336

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L LF  M  AN++ D  T+VS L+A + L  L+ G+ +  +I +    ++  V ++L+DM
Sbjct: 337 LSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDM 396

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y  CG ++ A ++FN +  +D I WT++I    ++G G+ A+D+F +M   S  PD +T 
Sbjct: 397 YFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTC 456

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           + +L AC+HSG++++GKKF   M   + ++P   HY C+VDLLGRA HL+EA++ +++M 
Sbjct: 457 IGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMP 516

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           ++P + VW +LLGACRVH ++E+ E+ A+++LEL+P N   YVL+ N++AA  +W+ + +
Sbjct: 517 VKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHE 576

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR  M   G+KKTPG S IE+   +H F+A D+ H +S EIY KL E++  L +  GY  
Sbjct: 577 VRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDL-KFAGYSP 635

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
            T  V  ++ EEEK   +Y HSE+LAIA+G++ S  G  IRI KNLR+CVDCH   KLVS
Sbjct: 636 DTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVS 695

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +++ RE++VRD  RFHHF  G CSC DYW
Sbjct: 696 KVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 222/460 (48%), Gaps = 35/460 (7%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +FD +     F WN M+  Y   G P   +  Y  M   G+  D +T+P ++K    
Sbjct: 72  ARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTR 131

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
              + CG ++H  ++K G+ S  F+ N+L+ +Y+   +   AR +FDR   K DVV WN 
Sbjct: 132 DTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDR-SSKGDVVTWNV 190

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +IS Y+ S Q  E++ LF EM+R+ ++ ++ T V+ L AC       +G  +H       
Sbjct: 191 MISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLK 250

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF-------------- 236
                 + NALI MYA CG M  A G+   ++++D +SW +++TGF              
Sbjct: 251 IEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFD 310

Query: 237 -----------------VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
                            +Q + + + +  FRE+Q A  KPD+   V+ ++A   LG L  
Sbjct: 311 KMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALEL 370

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ + AY  K     D  +GN L+DMY  C  V    R+F  M  +D ISWT +I G A 
Sbjct: 371 GEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAI 430

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI-IRKGL-SDLV 397
           N    +AL++F  +    +  D +    VL AC+    + + K+    +  + G+  ++ 
Sbjct: 431 NGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVA 490

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
               +VD+ G+ G++  +  V +++  K + + W S++ +
Sbjct: 491 HYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGA 530



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 160/362 (44%), Gaps = 46/362 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSN---GEPLRVLETYSRMRVLGISVD 57
           +Y   G V  A  +FD+ S+  V TWN M+  Y  +    E +++ +   RMRVL  S+ 
Sbjct: 163 LYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSI- 221

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             T   V+ AC+ LKDL+ G ++H  V     +    + N+L+ MYA C D   A  +FD
Sbjct: 222 --TLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFD 279

Query: 118 RMGEKEDVVLWNSIISAYSASGQC-------------------------------LEALG 146
            M  + DV+ W +I++ ++  GQ                                 E L 
Sbjct: 280 NMKSR-DVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLS 338

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           LFREMQ   +  + +T V+ L AC       LG  I A   K+   +  +V NALI MY 
Sbjct: 339 LFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYF 398

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
            CG + +A  +   + ++D +SW +++ G   N    +A+  F ++  A   PD+V  + 
Sbjct: 399 NCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIG 458

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            + A    G +  GK+  A    Q  +          ++    C V+ +GR  +   A +
Sbjct: 459 VLCACTHSGMVDKGKKFFARMTTQHGIEP--------NVAHYGCMVDLLGRAGHLKEAHE 510

Query: 327 FI 328
            I
Sbjct: 511 VI 512



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 124/254 (48%), Gaps = 4/254 (1%)

Query: 376 KCMSQTKEIHGYIIRKGLSDLVILNAIVDVY---GKCGNIDYSRNVFESIESKDVVSWTS 432
           K M+Q K+IH   I  GL    I+ A +  +    + G+++Y+R VF+++   +   W +
Sbjct: 30  KSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNN 89

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MI  Y   G  N A+ ++  M E  V  D  T    L   +  + +K G+EL+  I++ G
Sbjct: 90  MIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLG 149

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           F+    V ++L+ +Y+  G + +A  VF+     D++ W  MI+      +   ++ LF 
Sbjct: 150 FSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFD 209

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           +ME     P  IT +++L ACS    +N GK+    ++ D +++P       L+D+    
Sbjct: 210 EMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVK-DLKIEPVRVLENALIDMYAAC 268

Query: 613 NHLEEAYQFVRSMQ 626
             ++ A     +M+
Sbjct: 269 GDMDTALGIFDNMK 282


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/555 (41%), Positives = 358/555 (64%), Gaps = 3/555 (0%)

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           +HA  IK    SD  IG+ L+ MY K        R+F +M  +D +SW ++++G +    
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143

Query: 343 HLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILN 400
               L  F  ++ E G   + + + SV+ AC+ +  + + K +HG +++ G+S    ++N
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 203

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           +++++YGK G +D +  +FE +  + +VSW SM+  + HNG A + ++LF LM  A +  
Sbjct: 204 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 263

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D  T+V+ L A +   + ++ + ++ +I R GFN +  +A++L+++YA+ G L+ +  +F
Sbjct: 264 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 323

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
             ++ +D I WT+M+    +H  G+ AI LF  M  E    DH+TF  LL ACSHSGL+ 
Sbjct: 324 EEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 383

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           EGKK+ EIM   Y+++P  +HY+C+VDLLGR+  LE+AY+ ++SM +EP++ VW ALLGA
Sbjct: 384 EGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGA 443

Query: 641 CRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTP 700
           CRV+ N ELG+ VA++LL LDP +  NY+++SN+++A+  W+D  +VR  M+   L + P
Sbjct: 444 CRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNP 503

Query: 701 GSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEK 760
           G S+IE GNKIH F+  D+ H  SDEI+ KL E+  K+ RE G   +T+FVLH+++EE K
Sbjct: 504 GCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKI-REAGCAPKTEFVLHDIDEEVK 562

Query: 761 VQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANR 820
           V M+  HSE+LAIA+G+L +  G  + ITKNLR+C DCHS  K  S L  R +++RD+ R
Sbjct: 563 VDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKR 622

Query: 821 FHHFEAGVCSCGDYW 835
           FHHF  G+CSC DYW
Sbjct: 623 FHHFADGLCSCRDYW 637



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 175/351 (49%), Gaps = 7/351 (1%)

Query: 76  CGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
           C A IH  V+K    S  FI + LV+MY K      A++LFD M  K D+V WNS++S  
Sbjct: 81  CSA-IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK-DLVSWNSLMSGL 138

Query: 136 SASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
           S  G     L  F  M+   G   N  T ++ + AC D      G  +H   VK G + +
Sbjct: 139 SGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGK 198

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
             V N+LI MY + G +  A+ +  ++  +  VSWNSM+     N    K M  F  ++ 
Sbjct: 199 AKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR 258

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
           AG  PDQ   V  + A    G     + +HAY  + GF +D+ I   L+++YAK   +N 
Sbjct: 259 AGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNA 318

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
              +F ++  +D I+WT ++AGYA + C  +A++LF  +  EG++ D +    +L ACS 
Sbjct: 319 SEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 378

Query: 375 LKCMSQTK---EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
              + + K   EI   + R     L   + +VD+ G+ G ++ +  + +S+
Sbjct: 379 SGLVEEGKKYFEIMSEVYRVE-PRLDHYSCMVDLLGRSGRLEDAYELIKSM 428



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 162/318 (50%), Gaps = 10/318 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAF 59
           MY K G   DA++LFD++  + + +WN+++      G     L  + RMR   G   +  
Sbjct: 106 MYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEV 165

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V+ ACA +  LD G  +HG+V+K G      +VNSL+ MY K      A QLF+ M
Sbjct: 166 TLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 225

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             +  +V WNS++  ++ +G   + + LF  M+R G+  +  T VA L+AC D+      
Sbjct: 226 PVRS-LVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQA 284

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IHA   + G N  + +A AL+ +YA+ G++  +  +  +++++D ++W +ML G+  +
Sbjct: 285 ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVH 344

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A++ F  +   G + D V   + +SA    G +  GK+          +S++   
Sbjct: 345 ACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFE------IMSEVYRV 398

Query: 300 NTLMDMYAKCCCVNYMGR 317
              +D Y+  C V+ +GR
Sbjct: 399 EPRLDHYS--CMVDLLGR 414



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 120/240 (50%), Gaps = 13/240 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGK G +  A QLF+++  R++ +WN+M+  +  NG   + ++ ++ M+  GI+ D  T
Sbjct: 208 MYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQAT 267

Query: 61  FPCVIKACAMLKDLDCGAK---IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              +++AC    D   G +   IH  + +CG+++   I  +L+ +YAK      +  +F+
Sbjct: 268 MVALLRACT---DTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 324

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            + ++ D + W ++++ Y+      EA+ LF  M + G+  +  TF   L AC  S    
Sbjct: 325 EIKDR-DRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 383

Query: 178 LG---MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
            G    EI +   +    L  Y  + ++ +  R G++ +A  ++  +  + S   W ++L
Sbjct: 384 EGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 441



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 9/183 (4%)

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           LF L     V S   +LV A+S+ +S+S       ++  +I+     +G +   LV MY 
Sbjct: 52  LFQLSPPFQVYSIVQSLVFAISSCTSVSYCSA---IHARVIKSLNYSDGFIGDRLVSMYF 108

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA--IDLFYKMEAES-FAPDHIT 565
           + G  + A ++F+ +  KDL+ W S++  +GL GRG +   ++ F +M  ES   P+ +T
Sbjct: 109 KLGYDEDAQRLFDEMPNKDLVSWNSLM--SGLSGRGYLGACLNAFCRMRTESGRQPNEVT 166

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
            L+++ AC+  G ++EGK    ++     +    +    L+++ G+   L+ A Q    M
Sbjct: 167 LLSVVSACADMGALDEGKSLHGVV-VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 225

Query: 626 QIE 628
            + 
Sbjct: 226 PVR 228


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 273/804 (33%), Positives = 445/804 (55%), Gaps = 19/804 (2%)

Query: 41  RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV 100
           +V   YS   +L  SVD   +  ++++      L+ G  +H  ++K  +    F+ N+L+
Sbjct: 46  QVFPAYSSTFLLE-SVD---YVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLL 101

Query: 101 AMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
            MY KC D R A +LFD+M  K ++V +NS+IS Y       + + LF + +R+GL  + 
Sbjct: 102 NMYCKCGDTRSADKLFDKMS-KSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDK 160

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
           YT   AL AC  S   + G  IH   +  G   QV + N+LI MY++CG++ + A +L+ 
Sbjct: 161 YTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQV-DYARILFD 219

Query: 221 LENK-DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA--SGRLGNL 277
             +K D VSWNS++ G+VQN  Y + +   +++   G   +     +A+ A  S   G  
Sbjct: 220 HSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCK 279

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
           + G  LH +AIK G   D+ +G  L+DMYAK   ++   ++F QM  ++ + +  ++AG 
Sbjct: 280 MFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGL 339

Query: 338 AQ-----NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
            Q     + C  KAL LF  ++  G+   +    S+L AC  ++     K++H  + + G
Sbjct: 340 LQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNG 399

Query: 393 L-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
           L SD  I + ++D+Y   G++  +   F SI +  +V  T+MI  Y+ NG    AL LFY
Sbjct: 400 LLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFY 459

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
            +     + D     + +S+ +++ +L+ G+++ G   + G +      +S + MYA+ G
Sbjct: 460 ELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSG 519

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            L  AN  F  ++  D++ W++MI +N  HG    A+  F  M++    P+H  FL +L 
Sbjct: 520 DLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLI 579

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           ACSH GL+ EG ++ + M  DY++    +H  C+VDLLGRA  L +A   +  +  E   
Sbjct: 580 ACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEP 639

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
            +W ALL ACR+H +    + VA+K++EL+P    +YVL+ N++  +       +VR  M
Sbjct: 640 VMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLM 699

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
               +KK PG SWI+IG+K++SF++ D+SH  S +IY KL E+    +R     +    +
Sbjct: 700 EERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLD---SAKDIL 756

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
            + +E E    + Y HSE+LA+A+GVL  +E + +R+ KNLR+C+DCH   KL S +  R
Sbjct: 757 GYKIEHEHLTNVNY-HSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKR 815

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           EL+VRD+ RFHHF+ G CSCGDYW
Sbjct: 816 ELIVRDSVRFHHFKDGSCSCGDYW 839



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 167/554 (30%), Positives = 286/554 (51%), Gaps = 17/554 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG    A++LFDK+S+  + T+N+++  YV      +V+  + + R LG+ +D +T
Sbjct: 103 MYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYT 162

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + AC+   +L  G  IHGL+L  G  S   + NSL+ MY+KC     AR LFD   
Sbjct: 163 CAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDH-S 221

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF---ET 177
           +K D V WNS+I+ Y  +G+  E L + ++M + GL  N YT  +AL+AC  S+F   + 
Sbjct: 222 DKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACS-SNFNGCKM 280

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G  +H   +K G +L V V  AL+ MYA+ G + +A  +  Q+ +K+ V +N+M+ G +
Sbjct: 281 FGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLL 340

Query: 238 QNDLY---C--KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           Q +     C  KA+  F E++  G KP      + + A   + +    K++HA   K G 
Sbjct: 341 QQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGL 400

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
           +SD  IG+ L+D+Y+    +      F  +     +  T +I GY QN     AL LF  
Sbjct: 401 LSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYE 460

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGN 411
           +       D  I  +++ +C+ +  +   ++I G+  + G+S   I  N+ + +Y K G+
Sbjct: 461 LLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGD 520

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           +  +   F+ +E+ D+VSW++MI S   +G A EAL  F LM    +E +    +  L A
Sbjct: 521 LYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIA 580

Query: 472 ASSLSILKKGKELNGF-IIRKGFNLEGSVAS--SLVDMYARCGAL-DIANKVFNCVQTKD 527
            S   ++++G  L  F  + K + ++  V     +VD+  R G L D  + +       +
Sbjct: 581 CSHRGLVEEG--LRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHE 638

Query: 528 LILWTSMINANGLH 541
            ++W ++++A  +H
Sbjct: 639 PVMWRALLSACRIH 652


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 260/722 (36%), Positives = 402/722 (55%), Gaps = 9/722 (1%)

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K +VV WNS+IS Y+  G   E + LF+E +   L  + +TF  AL  C  +    LG  
Sbjct: 3   KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 62

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IHA    SG    V + N+LI MY +CG++  A  V    +  DSVSWNS++ G+V+   
Sbjct: 63  IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS 122

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGR--LGNLLNGKELHAYAIKQGFVSDLQIG 299
             + ++   ++   G   +     +A+ A G     ++  GK LH  A+K G   D+ +G
Sbjct: 123 NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVG 182

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ-----NNCHLKALELFRTVQ 354
             L+D YAK   +    ++F  M   + + +  +IAG+ Q     +    +A+ LF  +Q
Sbjct: 183 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 242

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
             G+        S+L ACS ++     K+IH  I +  L SD  I NA+V++Y   G+I+
Sbjct: 243 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIE 302

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
                F S    DVVSWTS+I  +V NG     L LF+ +  +  + D  T+   LSA +
Sbjct: 303 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACA 362

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           +L+ +K G++++ + I+ G      + +S + MYA+CG +D AN  F   +  D++ W+ 
Sbjct: 363 NLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSV 422

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           MI++N  HG  K A+DLF  M+    AP+HITFL +L ACSH GL+ EG ++ EIM+ D+
Sbjct: 423 MISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDH 482

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
            + P  +H AC+VDLLGRA  L EA  F+     E    +W +LL ACRVH   + G+ V
Sbjct: 483 GITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRV 542

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHS 713
           A++++EL+P    +YVL+ N++  +       ++R  M+  G+KK PG SWIE+GN +HS
Sbjct: 543 AERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHS 602

Query: 714 FIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAI 773
           F+A D+SH  S  IY +L E+ E++++   Y+ +      +  + +   M+  HSE+LA+
Sbjct: 603 FVAGDRSHPNSQVIYVQLEEMLEEIKKL-DYIDEKLVSDASEPKHKDNSMVSYHSEKLAV 661

Query: 774 AYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
            +G++     + +R+ KNLR C  CH   KL SRL  RE+++RD  RFH F  G CSCGD
Sbjct: 662 TFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGD 721

Query: 834 YW 835
           YW
Sbjct: 722 YW 723



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/558 (30%), Positives = 279/558 (50%), Gaps = 18/558 (3%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCG 77
           + +R V +WN+++  Y   G    V+  +   R+  + +D FTF   +  C    DL  G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
             IH L+   G      + NSL+ MY KC     AR +F+   E  D V WNS+I+ Y  
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL-DSVSWNSLIAGYVR 119

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACED--SSFETLGMEIHAATVKSGQNLQV 195
            G   E L L  +M R GL  N+Y   +AL+AC    SS    G  +H   VK G +L V
Sbjct: 120 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ-----NDLYCKAMQFFR 250
            V  AL+  YA+ G + +A  +   + + + V +N+M+ GF+Q     ++   +AM  F 
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 239

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           E+Q  G KP +    + + A   +     GK++HA   K    SD  IGN L+++Y+   
Sbjct: 240 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            +    + F+     D +SWT++I G+ QN      L LF  +   G   D   I  +L 
Sbjct: 300 SIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 359

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC+ L  +   ++IH Y I+ G+ +  I+ N+ + +Y KCG+ID +   F+  ++ D+VS
Sbjct: 360 ACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVS 419

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF-I 488
           W+ MISS   +G A EA++LF LM  + +  + IT +  L A S   ++++G  L  F I
Sbjct: 420 WSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEG--LRYFEI 477

Query: 489 IRKGFNLEGSVASS--LVDMYARCGALDIANK-VFNCVQTKDLILWTSMINANGLH---G 542
           ++K   +  +V  S  +VD+  R G L  A   + +     D ++W S+++A  +H    
Sbjct: 478 MKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATD 537

Query: 543 RGKVAIDLFYKMEAESFA 560
            GK   +   ++E E+ A
Sbjct: 538 TGKRVAERVIELEPEAAA 555



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 228/460 (49%), Gaps = 39/460 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYV---SNGEPLRVLETYSRMRVLGISVD 57
           MY KCG +  A  +F+   +    +WN+++  YV   SN E LR+L    +M   G++++
Sbjct: 85  MYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLL---VKMLRHGLNLN 141

Query: 58  AFTFPCVIKACA--MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           ++     +KAC       ++CG  +HG  +K G D    +  +L+  YAK  D   A ++
Sbjct: 142 SYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKI 201

Query: 116 FDRMGEKEDVVLWNSIISAY-----SASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
           F  M +  +VV++N++I+ +      A     EA+ LF EMQ  G+  + +TF + L+AC
Sbjct: 202 FKLMPDP-NVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKAC 260

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
                   G +IHA   K       ++ NAL+ +Y+  G + +     +     D VSW 
Sbjct: 261 STIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWT 320

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           S++ G VQN  +   +  F EL  +G+KPD+      +SA   L  + +G+++HAYAIK 
Sbjct: 321 SLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKT 380

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G  +   I N+ + MYAKC  ++     F +    D +SW+ +I+  AQ+ C  +A++LF
Sbjct: 381 GIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLF 440

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA--------- 401
             ++  G+  + +    VL+ACS           HG ++ +GL    I+           
Sbjct: 441 ELMKGSGIAPNHITFLGVLVACS-----------HGGLVEEGLRYFEIMKKDHGITPNVK 489

Query: 402 ----IVDVYGKCGNIDYSRN-VFESIESKDVVSWTSMISS 436
               IVD+ G+ G +  + + + +S    D V W S++S+
Sbjct: 490 HSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 529



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 198/375 (52%), Gaps = 14/375 (3%)

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +  ++ VSWNS+++G+ Q   Y + M  F+E + +  + D+    NA+S  GR  +L  G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           + +HA     G    + + N+L+DMY KC  +++   VF      D +SW ++IAGY + 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMAC-----SGLKCMSQTKEIHGYIIRKGLS- 394
             + + L L   +   GL+ +   +GS L AC     S ++C    K +HG  ++ GL  
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIEC---GKMLHGCAVKLGLDL 177

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH-----NGLANEALEL 449
           D+V+  A++D Y K G+++ +  +F+ +   +VV + +MI+ ++      +  ANEA+ L
Sbjct: 178 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 237

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           F+ M    ++    T  S L A S++   + GK+++  I +     +  + ++LV++Y+ 
Sbjct: 238 FFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 297

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
            G+++   K F+     D++ WTS+I  +  +G+ +  + LF+++      PD  T   +
Sbjct: 298 SGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIM 357

Query: 570 LYACSHSGLINEGKK 584
           L AC++   +  G++
Sbjct: 358 LSACANLAAVKSGEQ 372


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/555 (41%), Positives = 358/555 (64%), Gaps = 3/555 (0%)

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           +HA  IK    SD  IG+ L+ MY K        R+F +M  +D +SW ++++G +    
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200

Query: 343 HLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILN 400
               L  F  ++ E G   + + + SV+ AC+ +  + + K +HG +++ G+S    ++N
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 260

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           +++++YGK G +D +  +FE +  + +VSW SM+  + HNG A + ++LF LM  A +  
Sbjct: 261 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 320

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D  T+V+ L A +   + ++ + ++ +I R GFN +  +A++L+++YA+ G L+ +  +F
Sbjct: 321 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 380

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
             ++ +D I WT+M+    +H  G+ AI LF  M  E    DH+TF  LL ACSHSGL+ 
Sbjct: 381 EEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 440

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           EGKK+ EIM   Y+++P  +HY+C+VDLLGR+  LE+AY+ ++SM +EP++ VW ALLGA
Sbjct: 441 EGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGA 500

Query: 641 CRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTP 700
           CRV+ N ELG+ VA++LL LDP +  NY+++SN+++A+  W+D  +VR  M+   L + P
Sbjct: 501 CRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNP 560

Query: 701 GSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEK 760
           G S+IE GNKIH F+  D+ H  SDEI+ KL E+  K+ RE G   +T+FVLH+++EE K
Sbjct: 561 GCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKI-REAGCAPKTEFVLHDIDEEVK 619

Query: 761 VQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANR 820
           V M+  HSE+LAIA+G+L +  G  + ITKNLR+C DCHS  K  S L  R +++RD+ R
Sbjct: 620 VDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKR 679

Query: 821 FHHFEAGVCSCGDYW 835
           FHHF  G+CSC DYW
Sbjct: 680 FHHFADGLCSCRDYW 694



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 175/352 (49%), Gaps = 7/352 (1%)

Query: 76  CGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
           C A IH  V+K    S  FI + LV+MY K      A++LFD M  K D+V WNS++S  
Sbjct: 138 CSA-IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK-DLVSWNSLMSGL 195

Query: 136 SASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
           S  G     L  F  M+   G   N  T ++ + AC D      G  +H   VK G + +
Sbjct: 196 SGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGK 255

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
             V N+LI MY + G +  A+ +  ++  +  VSWNSM+     N    K M  F  ++ 
Sbjct: 256 AKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR 315

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
           AG  PDQ   V  + A    G     + +HAY  + GF +D+ I   L+++YAK   +N 
Sbjct: 316 AGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNA 375

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
              +F ++  +D I+WT ++AGYA + C  +A++LF  +  EG++ D +    +L ACS 
Sbjct: 376 SEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 435

Query: 375 LKCMSQTK---EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
              + + K   EI   + R     L   + +VD+ G+ G ++ +  + +S+ 
Sbjct: 436 SGLVEEGKKYFEIMSEVYRVE-PRLDHYSCMVDLLGRSGRLEDAYELIKSMP 486



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 162/318 (50%), Gaps = 10/318 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAF 59
           MY K G   DA++LFD++  + + +WN+++      G     L  + RMR   G   +  
Sbjct: 163 MYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEV 222

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V+ ACA +  LD G  +HG+V+K G      +VNSL+ MY K      A QLF+ M
Sbjct: 223 TLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 282

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             +  +V WNS++  ++ +G   + + LF  M+R G+  +  T VA L+AC D+      
Sbjct: 283 PVRS-LVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQA 341

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IHA   + G N  + +A AL+ +YA+ G++  +  +  +++++D ++W +ML G+  +
Sbjct: 342 ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVH 401

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A++ F  +   G + D V   + +SA    G +  GK+          +S++   
Sbjct: 402 ACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFE------IMSEVYRV 455

Query: 300 NTLMDMYAKCCCVNYMGR 317
              +D Y+  C V+ +GR
Sbjct: 456 EPRLDHYS--CMVDLLGR 471



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 117/237 (49%), Gaps = 7/237 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGK G +  A QLF+++  R++ +WN+M+  +  NG   + ++ ++ M+  GI+ D  T
Sbjct: 265 MYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQAT 324

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +++AC           IH  + +CG+++   I  +L+ +YAK      +  +F+ + 
Sbjct: 325 MVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK 384

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG- 179
           ++ D + W ++++ Y+      EA+ LF  M + G+  +  TF   L AC  S     G 
Sbjct: 385 DR-DRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGK 443

Query: 180 --MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
              EI +   +    L  Y  + ++ +  R G++ +A  ++  +  + S   W ++L
Sbjct: 444 KYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 498



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 87/168 (51%), Gaps = 9/168 (5%)

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           +LV A+S+ +S+S       ++  +I+     +G +   LV MY + G  + A ++F+ +
Sbjct: 124 SLVFAISSCTSVSYCSA---IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 180

Query: 524 QTKDLILWTSMINANGLHGRGKVA--IDLFYKMEAES-FAPDHITFLALLYACSHSGLIN 580
             KDL+ W S++  +GL GRG +   ++ F +M  ES   P+ +T L+++ AC+  G ++
Sbjct: 181 PNKDLVSWNSLM--SGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALD 238

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           EGK    ++     +    +    L+++ G+   L+ A Q    M + 
Sbjct: 239 EGKSLHGVV-VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR 285


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 260/750 (34%), Positives = 419/750 (55%), Gaps = 7/750 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAFT 60
           Y K   V  A +LFD +S + + TW++M+  Y  +   L  L  + + MR      + + 
Sbjct: 84  YSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYI 143

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++AC     L+   +IHGLV+K GY    ++  SL+  Y K      AR LFD + 
Sbjct: 144 LASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQ 203

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K     W +II+ YS  G+   +L LF +M+   +  + Y   + L AC    F   G 
Sbjct: 204 VKTSFT-WTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGK 262

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   ++SG  + V + N  I  Y +C K+     +  ++ +K+ VSW +++ G +QN 
Sbjct: 263 QIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNS 322

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  A+  F E+   G  PD     + +++ G L  L  G+++HAYAIK    +D  + N
Sbjct: 323 FHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKN 382

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  +    +VF  M A D +S+  +I GY++ +   +AL+LFR ++L     
Sbjct: 383 GLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSP 442

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
            ++I  S+L   + L  +  + +IHG II+ G+S D    +A++DVY KC  +  +R VF
Sbjct: 443 TLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVF 502

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E I+ KD+V WT+M S Y       E+L+L+  +  + ++ +  T  + ++AAS+++ L+
Sbjct: 503 EEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLR 562

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G++ +  +I+ GF+ +  VA++LVDMYA+ G+++ A+K F     KD   W SMI    
Sbjct: 563 HGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYA 622

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG  + A+ +F  M  E   P+++TF+ +L ACSH+GL++ G    + M   + ++P  
Sbjct: 623 QHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMS-QFGIEPGI 681

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C+V LLGRA  L EA +F+  M I+  A VW +LL ACRV  N ELG   A+  + 
Sbjct: 682 EHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAIS 741

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            +P + G+YVL+SN+FA+   W +V ++R +M  SG+ K PG SWIE+ N+IH FIA+D 
Sbjct: 742 CNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDT 801

Query: 720 SHSESDEIYKKLAEITEKLEREG-GYVAQT 748
           +H +S  I   L  +   L+ +G GY+A T
Sbjct: 802 AHRDSAPISLVLDNLL--LQIKGFGYMANT 829



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 174/609 (28%), Positives = 315/609 (51%), Gaps = 12/609 (1%)

Query: 74  LDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           + C  KIH  ++  G+   D F+VN+L+  Y+K      A +LFD M  K ++V W+S++
Sbjct: 54  IPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHK-NLVTWSSMV 112

Query: 133 SAYSASGQCLEALGLFRE-MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           S Y+    CLEAL LF + M+      N Y   + ++AC         ++IH   VK G 
Sbjct: 113 SMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGY 172

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
              VYV  +LI  Y +   + +A  +   L+ K S +W +++ G+ +      +++ F +
Sbjct: 173 VQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQ 232

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           ++     PD+    + +SA   L  L  GK++H Y ++ G V D+ + N  +D Y KC  
Sbjct: 233 MKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHK 292

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           V    ++F +M  ++ +SWTT+IAG  QN+ H  AL+LF  +   G + D     SVL +
Sbjct: 293 VQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNS 352

Query: 372 CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           C  L  + + +++H Y I+  + +D  + N ++D+Y KC ++  +R VF  + + D+VS+
Sbjct: 353 CGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSY 412

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
            +MI  Y       EAL+LF  M  +      +  VS L  ++SL  L+   +++G II+
Sbjct: 413 NAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIK 472

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
            G +L+    S+L+D+Y++C  +  A  VF  +Q KD+++WT+M +        + ++ L
Sbjct: 473 YGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKL 532

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLL 609
           +  ++     P+  TF A++ A S+   +  G++F  ++++  +  DP+  +   LVD+ 
Sbjct: 533 YKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVAN--TLVDMY 590

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG-EIVAKKLLELDPGNPGNY 668
            ++  +EEA++   S   + TA  W +++     H   E   ++    ++E   G   NY
Sbjct: 591 AKSGSIEEAHKAFISTNWKDTA-CWNSMIATYAQHGEAEKALQVFEDMIME---GLKPNY 646

Query: 669 VLISNVFAA 677
           V    V +A
Sbjct: 647 VTFVGVLSA 655



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 165/337 (48%), Gaps = 18/337 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC S+ DA ++F+ ++   + ++NAM+  Y    +    L+ +  MR+   S     
Sbjct: 387 MYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLI 446

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++   A L  L+   +IHGL++K G    +F  ++L+ +Y+KC     AR +F+ + 
Sbjct: 447 FVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQ 506

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K D+V+W ++ S Y+   +  E+L L++ +Q   L  N +TF A + A  + +    G 
Sbjct: 507 DK-DIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQ 565

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   +K G +   +VAN L+ MYA+ G + EA         KD+  WNSM+  + Q+ 
Sbjct: 566 QFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHG 625

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG----KELHAYAIKQGFVSDL 296
              KA+Q F ++   G KP+ V  V  +SA    G L  G      +  + I+ G     
Sbjct: 626 EAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPG----- 680

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
                 ++ Y   C V+ +GR      A++FI    I
Sbjct: 681 ------IEHYV--CMVSLLGRAGKLYEAKEFIEKMPI 709



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 179/323 (55%), Gaps = 10/323 (3%)

Query: 272 GR-LGNLLNG------KELHAYAIKQGF-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
           GR L NLL        K++H+  +  GF   D+ + NTL+  Y+K   VN+  ++F  M+
Sbjct: 42  GRELANLLQSPHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMS 101

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
            ++ ++W+++++ Y  ++  L+AL LF + ++      +  I+ SV+ AC+    ++   
Sbjct: 102 HKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPAL 161

Query: 383 EIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
           +IHG +++ G + D+ +  +++D Y K   ID +R +F+ ++ K   +WT++I+ Y   G
Sbjct: 162 QIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQG 221

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
            +  +L+LF  M E +V  D   L S LSA   L  L+ GK+++ +++R G  ++ S+ +
Sbjct: 222 RSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVN 281

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
             +D Y +C  + +  K+F+ +  K+++ WT++I     +   + A+DLF +M    + P
Sbjct: 282 GFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNP 341

Query: 562 DHITFLALLYACSHSGLINEGKK 584
           D     ++L +C     + +G++
Sbjct: 342 DAFGCTSVLNSCGSLVALEKGRQ 364



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 2/236 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  V DA  +F+++  + +  W AM   Y    E    L+ Y  +++  +  + FT
Sbjct: 488 VYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFT 547

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VI A + +  L  G + H  V+K G+D   F+ N+LV MYAK     +A + F    
Sbjct: 548 FAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTN 607

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D   WNS+I+ Y+  G+  +AL +F +M   GL  N  TFV  L AC  +    LG 
Sbjct: 608 WK-DTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGF 666

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD-SVSWNSMLTG 235
           +   +  + G    +     ++++  R GK+ EA   + ++  K  +V W S+L+ 
Sbjct: 667 DHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSA 722


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/602 (38%), Positives = 377/602 (62%), Gaps = 10/602 (1%)

Query: 243 CKAMQFFRELQGAGQK--PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           CK  +  + L+   Q+  P Q      +   G   +L +G  +H + +  G   D  +  
Sbjct: 57  CKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLAT 116

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MY+    V+Y  +VF +   +    W  +           + L L+  +   G+++
Sbjct: 117 KLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVES 176

Query: 361 DVMIIGSVLMACSGLKC----MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
           D      VL AC   +C    +++ KEIH ++ R+G  S + I+  +VD+Y + G +DY+
Sbjct: 177 DRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYA 236

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVES-DSITLVSALSAAS 473
             VF  +  ++VVSW++MI+ Y  NG A EAL  F  +M E    S +S+T+VS L A +
Sbjct: 237 SYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACA 296

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           SL+ L++G+ ++G+I+R+G +    V S+LV MY RCG LD+  +VF+ +  +D++ W S
Sbjct: 297 SLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNS 356

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           +I++ G+HG G+ AI +F +M A   +P  +TF+++L ACSH GL+ EGK+  E M  D+
Sbjct: 357 LISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDH 416

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
            + P  EHYAC+VDLLGRAN L+EA + V+ M+ EP  +VW +LLG+CR+H N EL E  
Sbjct: 417 GIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERA 476

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHS 713
           +++L  L+P N GNYVL+++++A ++ W +V++V+  +   GL+K PG  W+E+  K++S
Sbjct: 477 SRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYS 536

Query: 714 FIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAI 773
           F++ D+ +   ++I+  L ++ E + +E GY+ QT+ VL+ +E EEK +++ GHSE+LA+
Sbjct: 537 FVSMDEFNPLMEQIHAFLVKLAEDM-KEKGYIPQTKGVLYELETEEKERIVLGHSEKLAL 595

Query: 774 AYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
           A+G++ +++G  IRITKNLR+C DCH F K +S+   +E++VRD NRFH F+ GVCSCGD
Sbjct: 596 AFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGD 655

Query: 834 YW 835
           YW
Sbjct: 656 YW 657



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 229/472 (48%), Gaps = 20/472 (4%)

Query: 31  GAYVSNGEPLRVL----ETYSRMRVLG--ISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
           GA +SN + ++ L    +    +RVL    S    T+  +I  C     L  G ++H  +
Sbjct: 44  GAKISNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHI 103

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           L  G D   F+   L+ MY+       AR++FD+   K  + +WN++  A + +G   E 
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT-RKRTIYVWNALFRALTLAGHGEEV 162

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFE----TLGMEIHAATVKSGQNLQVYVANA 200
           LGL+ +M R+G+ ++ +T+   L+AC  S       T G EIHA   + G N  VY+   
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTT 222

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL--QGAGQK 258
           L+ MYAR G +  A+ V   +  ++ VSW++M+  + +N    +A++ FRE+  +     
Sbjct: 223 LVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSS 282

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P+ V  V+ + A   L  L  G+ +H Y +++G  S L + + L+ MY +C  ++   RV
Sbjct: 283 PNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRV 342

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F +M  +D +SW ++I+ Y  +    KA+++F  +   G     +   SVL ACS    +
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402

Query: 379 SQTKEIHGYIIR-KGLSDLVILNA-IVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMIS 435
            + K +   + R  G+   V   A +VD+ G+   +D +  + + + ++     W S++ 
Sbjct: 403 EEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462

Query: 436 SYVHNG---LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           S   +G   LA  A    + +   N   + + L    + A     +K+ K+L
Sbjct: 463 SCRIHGNVELAERASRRLFALEPKNA-GNYVLLADIYAEAQMWDEVKRVKKL 513



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 156/291 (53%), Gaps = 11/291 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   GSV  A ++FDK  +RT++ WNA+  A    G    VL  Y +M  +G+  D FT
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180

Query: 61  FPCVIKACA----MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK--CYDFRKARQ 114
           +  V+KAC         L  G +IH  + + GY+S  +I+ +LV MYA+  C D+  A  
Sbjct: 181 YTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDY--ASY 238

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACED 172
           +F+ M  + +VV W+++I+ Y+ +G+  EAL  FREM  +      N+ T V+ LQAC  
Sbjct: 239 VFNGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACAS 297

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
            +    G  IH   ++ G +  + V +AL+ MY RCGK+     V  ++ ++D VSWNS+
Sbjct: 298 LAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSL 357

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           ++ +  +    KA+Q F E+   G  P  V  V+ + A    G +  GK L
Sbjct: 358 ISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/740 (33%), Positives = 414/740 (55%), Gaps = 5/740 (0%)

Query: 6    GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
            G +  A  L  K+   +   WNA++  +  +G    VL  Y  MR  G+     TF  ++
Sbjct: 273  GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASML 332

Query: 66   KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
             A A +K    G ++H   +  G D+  F+ +SL+ +YAKC     A+ +FD   EK ++
Sbjct: 333  SAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEK-NI 391

Query: 126  VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
            V+WN++++ +  +    EA+ +F+ M R  L T+ +TFV+ L AC   S   LG ++H  
Sbjct: 392  VMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCV 451

Query: 186  TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
            T+K+  ++ ++VANA + MY++ G + +A  +   +  KDS+SWN++  G  QN    +A
Sbjct: 452  TIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEA 511

Query: 246  MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
            +   + ++  G  PD V    A++A   +     GK++H  AIK G  S+  +G++L+D+
Sbjct: 512  VCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDL 571

Query: 306  YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
            Y+K   V    ++F Q+ A   +    +IAG+ QNN   +A++LF+ V  +GL    +  
Sbjct: 572  YSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTF 631

Query: 366  GSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNI-DYSRNVFESI 422
             S+L  CSG    +  K++H Y ++ G+   D ++  ++  +Y K   + D ++ + E  
Sbjct: 632  SSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMP 691

Query: 423  ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
            + K++  WT++IS Y  NG  + +L  F+ M   NV SD  T  S L A S ++    GK
Sbjct: 692  DHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGK 751

Query: 483  ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLH 541
            E++G I + GF    +  S+L+DMY++CG +  + + F  ++ K D++ W SMI     +
Sbjct: 752  EIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKN 811

Query: 542  GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
            G    A+ LF KME     PD +TFL +L AC+HSGLI+EG+ F   MR  Y L P  +H
Sbjct: 812  GYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDH 871

Query: 602  YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
            YAC +DLLGR  HL+EA + +  +   P   VW   L ACR+H ++E G+I A+KL+EL+
Sbjct: 872  YACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELE 931

Query: 662  PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
            P     YVL+S++ AA+  W + +  R  MR  G+ K PG SWI +GNK   F+ +DK H
Sbjct: 932  PQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYH 991

Query: 722  SESDEIYKKLAEITEKLERE 741
             ++  IY+ L ++T  ++++
Sbjct: 992  PDNLRIYEMLGDLTGMMKKD 1011



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 288/568 (50%), Gaps = 14/568 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG   DA+ +FD   ++ +  WNAML  +V N  P   +  +  M    +  D FT
Sbjct: 369 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFT 428

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ AC  L     G ++H + +K   D + F+ N+ + MY+K      A+ LF  + 
Sbjct: 429 FVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP 488

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D + WN++    + + +  EA+ + + M+  G+  +  +F  A+ AC +      G 
Sbjct: 489 YK-DSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K G      V ++LI +Y++ G +  +  +  Q++    V  N+++ GFVQN+
Sbjct: 548 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 607

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSA-SGRLGNLLNGKELHAYAIKQGFV-SDLQI 298
              +A+Q F+++   G KP  V   + +S  SG L + + GK++H Y +K G +  D  +
Sbjct: 608 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAI-GKQVHCYTLKSGVLYDDTLL 666

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           G +L  +Y K   +    ++  +M   ++   WT II+GYAQN     +L  F  ++   
Sbjct: 667 GVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCN 726

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSR 416
           + +D     SVL ACS +   +  KEIHG I + G        +A++D+Y KCG++  S 
Sbjct: 727 VRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSF 786

Query: 417 NVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             F+ +++K D++ W SMI  +  NG A+EAL LF  M E  ++ D +T +  L A +  
Sbjct: 787 EAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHS 846

Query: 476 SILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWT 532
            ++ +G+   G  +RK + L   +   +  +D+  R G L  A +  + +  + D ++W 
Sbjct: 847 GLISEGRHFFG-PMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWA 905

Query: 533 SMINANGLHG---RGKVAIDLFYKMEAE 557
           + + A  +H    RGK+A     ++E +
Sbjct: 906 TYLAACRMHKDEERGKIAARKLVELEPQ 933



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 275/578 (47%), Gaps = 38/578 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
           +Y K G V  A        +R     +++L  +  +G P  VL  +  +R   G   D F
Sbjct: 100 LYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQF 159

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
               V+ AC+ +  L  G ++H  V+K G+ S+ F   +LV MYAKC D   AR++FD +
Sbjct: 160 GLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGI 219

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               D + W+S+I+ Y   G   EAL LF  M ++G   +  T V               
Sbjct: 220 A-CPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLV--------------- 263

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                                +I+  A  G++  A  +L ++    +V+WN++++G  Q+
Sbjct: 264 --------------------TIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQS 303

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L    +  +++++  G  P +    + +SA+  +   + G+++HA A+  G  +++ +G
Sbjct: 304 GLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVG 363

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           ++L+++YAKC C +    VF     ++ + W  ++ G+ QN    +A+ +F+ +    L 
Sbjct: 364 SSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQ 423

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            D     S+L AC+ L      K++H   I+  +   L + NA +D+Y K G I  ++ +
Sbjct: 424 TDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKAL 483

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  I  KD +SW ++      N    EA+ +   M    +  D ++  +A++A S++   
Sbjct: 484 FSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRAT 543

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + GK+++   I+ G     +V SSL+D+Y++ G ++ + K+F  V    ++   ++I   
Sbjct: 544 ETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 603

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             +     AI LF ++  +   P  +TF ++L  CS S
Sbjct: 604 VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGS 641



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 239/510 (46%), Gaps = 44/510 (8%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +HG +L+ G      + +SLV +Y K      A       GE+      +S++S ++ SG
Sbjct: 78  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAA-SSLLSCHARSG 136

Query: 140 QCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
              + LG FR ++   G   + +     L AC        G ++H   VKSG +  V+  
Sbjct: 137 SPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCE 196

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
            AL+ MYA+CG +  A  V   +   D++ W+SM+  + +   Y +A+  F  +   G  
Sbjct: 197 AALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSA 256

Query: 259 PDQVCTVNAVS---ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           PDQV  V  +S   +SGRL         HA A+ +                         
Sbjct: 257 PDQVTLVTIISTLASSGRLD--------HATALLK------------------------- 283

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
                +M     ++W  +I+G+AQ+      L L++ ++  GL        S+L A + +
Sbjct: 284 -----KMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANM 338

Query: 376 KCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           K   + +++H   +  GL +++ + ++++++Y KCG    ++NVF+    K++V W +M+
Sbjct: 339 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 398

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           + +V N L  EA+ +F  M    +++D  T VS L A + LS    GK+++   I+   +
Sbjct: 399 TGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMD 458

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
           +   VA++ +DMY++ GA+  A  +F+ +  KD I W ++      +   + A+ +  +M
Sbjct: 459 ISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRM 518

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKK 584
                 PD ++F   + ACS+      GK+
Sbjct: 519 RLHGITPDDVSFSTAINACSNIRATETGKQ 548



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 15/270 (5%)

Query: 379 SQT-KEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           SQT + +HG I+R G   L  L +++V++Y K G + Y+ +       +   + +S++S 
Sbjct: 72  SQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSC 131

Query: 437 YVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
           +  +G   + L  F Y+   A    D   L   LSA S + +L  G++++  +++ GF+ 
Sbjct: 132 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSS 191

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
                ++LVDMYA+CG +  A +VF+ +   D I W+SMI      G  + A+ LF +M+
Sbjct: 192 SVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 251

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
               APD +T + ++   + SG ++     L+ M       P P   A    + G A   
Sbjct: 252 KMGSAPDQVTLVTIISTLASSGRLDHATALLKKM-------PTPSTVAWNAVISGHAQSG 304

Query: 616 EE-----AYQFVRSMQIEPTAEVWCALLGA 640
            E      Y+ +RS  + PT   + ++L A
Sbjct: 305 LEFNVLGLYKDMRSWGLWPTRSTFASMLSA 334


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/559 (39%), Positives = 357/559 (63%), Gaps = 4/559 (0%)

Query: 280  GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
            G+ +HA+ IK  +   + +   L+ +Y KC C+    RV  +M  ++ +SWT +I+GY+Q
Sbjct: 496  GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQ 555

Query: 340  NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVI 398
                 +AL LF  + + G   +     +VL +C+        ++IH  +I+    S + +
Sbjct: 556  RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 615

Query: 399  LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
             ++++D+Y K G I  +R VF+ +  +DVVS T++IS Y   GL  EAL+LF  +    +
Sbjct: 616  GSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGM 675

Query: 459  ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
             S+ +T  S L+A S L+ L  G++++  ++R        + +SL+DMY++CG+L  + +
Sbjct: 676  RSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRR 735

Query: 519  VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSG 577
            +F+ +  + +I W +M+     HG G+ A++LF  M+ E+   PD +TFLA+L  CSH G
Sbjct: 736  IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG 795

Query: 578  LINEGKK-FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
            + + G + F E++      +P  EHY C+VDL GRA  +EEA++F++ M  EPTA +W +
Sbjct: 796  MEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGS 855

Query: 637  LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
            LLGACRVH N  +GE VA++LLE++  N GNYV++SN++A++ +W DV  VR  M+   +
Sbjct: 856  LLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAV 915

Query: 697  KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
             K PG SWIE+   +H+F A D+SH   +E++ K+ E++ K+ +E GYV +   VL++V+
Sbjct: 916  IKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKI-KEAGYVPELSCVLYDVD 974

Query: 757  EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
            +E+K ++L GHSE+LA+A+G++ +  G+ +RI KNLR+CVDCH+F K +SR++GRE+ +R
Sbjct: 975  DEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLR 1034

Query: 817  DANRFHHFEAGVCSCGDYW 835
            D NRFHH   G CSCGDYW
Sbjct: 1035 DKNRFHHIVGGTCSCGDYW 1053



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 215/420 (51%), Gaps = 13/420 (3%)

Query: 29  MLGAYVSNGEPLRVL-------ETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIH 81
           +L  + +N   L+ L       E    M + G+ V+   +  V+  C     +  G ++H
Sbjct: 441 LLSTFPANSPDLKTLCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVH 500

Query: 82  GLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQC 141
             ++K  Y+   ++   L+ +Y KC     AR++ D M E+ +VV W ++IS YS  G  
Sbjct: 501 AHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER-NVVSWTAMISGYSQRGYA 559

Query: 142 LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANAL 201
            EAL LF EM   G   N +TF   L +C  SS   LG +IH+  +K+     ++V ++L
Sbjct: 560 SEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSL 619

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           + MYA+ GK+ EA  V   L  +D VS  ++++G+ Q  L  +A+  FR LQ  G + + 
Sbjct: 620 LDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNY 679

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
           V   + ++A   L  L +G+++H++ ++      + + N+L+DMY+KC  + Y  R+F  
Sbjct: 680 VTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDS 739

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQ 380
           M  +  ISW  ++ GY+++    +A+ELF+ ++ E  +  D +   +VL  CS      +
Sbjct: 740 MPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDR 799

Query: 381 TKEIHGYII--RKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
             EI   ++  + G   ++     +VD++G+ G ++ +    + +  +   + W S++ +
Sbjct: 800 GLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 859



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 198/382 (51%), Gaps = 12/382 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  + DA ++ D++ +R V +W AM+  Y   G     L  +  M + G + + FT
Sbjct: 521 LYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFT 580

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ +C        G +IH LV+K  ++S  F+ +SL+ MYAK     +AR++FD + 
Sbjct: 581 FATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DVV   +IIS Y+  G   EAL LFR +QR G+ +N  T+ + L A    +    G 
Sbjct: 641 ER-DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR 699

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  +++     V + N+LI MY++CG +T +  +   +  +  +SWN+ML G+ ++ 
Sbjct: 700 QVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG 759

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GFVSDLQ 297
           L  +A++ F+ ++   + KPD V  +  +S     G    G E+    + Q  GF  +++
Sbjct: 760 LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIE 819

Query: 298 IGNTLMDMYAKCCCV----NYMGRVFYQMTAQDFISWTTII-AGYAQNNCHLKALELFRT 352
               ++D++ +   V     ++ ++ ++ TA     W +++ A     N H+      R 
Sbjct: 820 HYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAA---IWGSLLGACRVHQNVHIGEFVARRL 876

Query: 353 VQLEGLDADVMIIGSVLMACSG 374
           +++E  +A   +I S L A +G
Sbjct: 877 LEIESENAGNYVILSNLYASAG 898



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 61/118 (51%)

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           S L+   S + +++G+ ++  +I+  +     + + L+ +Y +C  L  A +V + +  +
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           +++ WT+MI+     G    A+ LF +M     AP+  TF  +L +C+ S     G++
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 285/860 (33%), Positives = 452/860 (52%), Gaps = 52/860 (6%)

Query: 15  FDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC-VIKACAMLKD 73
           F+  S    FT    L   VS  EPL         R L  S+     P  +++      D
Sbjct: 62  FNSTSPTQFFTSPQHL---VSLSEPLFA------SRSLNTSLSTIASPFDLLRLSTRYGD 112

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
            D    +H   LK   D   F+ N+L++ Y K    R A ++F  +    +VV + ++IS
Sbjct: 113 PDLARAVHAQFLKLEEDI--FLGNALISAYLKLGLVRDADKVFSGLS-CPNVVSYTALIS 169

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
            +S S    EA+ LF  M   G+  N YTFVA L AC  +    LG ++H   VK G   
Sbjct: 170 GFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLS 229

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V++ NAL+ +Y +CG +     +  ++  +D  SWN++++  V+   Y +A  +FR +Q
Sbjct: 230 CVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQ 289

Query: 254 -GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
              G K D       ++A       + G++LHA A+K G  S L + ++L+  Y KC   
Sbjct: 290 LCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSA 349

Query: 313 NYMGRVFYQMTAQDFISWT-------------------------------TIIAGYAQNN 341
           N +  +F  M  +D I+WT                                ++AG ++N+
Sbjct: 350 NDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRND 409

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILN 400
              +ALELF  +  EG++     + S++ AC  LK    +++I G++++ G LS+  I  
Sbjct: 410 DGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIET 469

Query: 401 AIVDVYGKCGNIDYSRNVF--ESIESKDVVSWTSMISSYVHNGLANEALELFYL-MNEAN 457
           A+VD+Y +CG ++ +  +F   S+E+      TSMI  Y  NG  NEA+ LF+   +E  
Sbjct: 470 ALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGA 529

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           +  D +   S LS   S+   + GK+++   ++ G   E  V ++ V MY++C  +D A 
Sbjct: 530 IVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAV 589

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS- 576
           +VFN +  +D++ W  ++  + LH +G  A+ ++ KME     PD ITF  ++ A  H+ 
Sbjct: 590 RVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTE 649

Query: 577 -GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
             L++  +     M  ++ + P  EHYA  + +LGR   LEEA Q +R+M +EP   VW 
Sbjct: 650 LNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWR 709

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL +CR++ N+ L ++ A+ +L ++P +P +Y+L SN+++AS +W   E+VR  MR  G
Sbjct: 710 ALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKG 769

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
            +K P  SWI   NKIHSF ARD+SH +  +IY  L EI      + GYV  T FVL  V
Sbjct: 770 FRKHPSQSWIIHENKIHSFYARDRSHPQGKDIYSGL-EILILECLKVGYVPDTSFVLQEV 828

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           EE +K + L+ HS +LA  +G+L +  G  I+I KN+R+C DCH+F K VS +  R++++
Sbjct: 829 EERQKKEFLFYHSGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILL 888

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD + FH F  G CSC DYW
Sbjct: 889 RDTSGFHWFIDGQCSCTDYW 908



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 150/578 (25%), Positives = 287/578 (49%), Gaps = 45/578 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G V DA+++F  +S   V ++ A++  +  +      +E +  M   GI  + +TF
Sbjct: 140 YLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTF 199

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ AC    D   G+++HG+V+K G  S  FI N+L+ +Y KC       +LF+ M E
Sbjct: 200 VAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPE 259

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLGM 180
           + D+  WN++IS+     +  EA   FR MQ   GL  + ++    L AC  S     G 
Sbjct: 260 R-DITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQ 318

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT------ 234
           ++HA  +K G    + V+++LI  Y +CG   +   +   +  +D ++W  M+T      
Sbjct: 319 QLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFG 378

Query: 235 -------------------------GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
                                    G  +ND   +A++ F E+   G +       + ++
Sbjct: 379 MLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIIT 438

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFI 328
           A G L +    +++  + +K G +S+  I   L+DMY +C  +    ++FYQ + + D+ 
Sbjct: 439 ACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYT 498

Query: 329 SW-TTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHG 386
           +  T++I GYA+N    +A+ LF + Q EG +  D ++  S+L  C  +      K++H 
Sbjct: 499 AMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHC 558

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           + ++ GL ++  + NA V +Y KC N+D +  VF ++  +D+VSW  +++ +V +   ++
Sbjct: 559 HALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDK 618

Query: 446 ALELFYLMNEANVESDSITLVSALSA--ASSLSILKKGKELNGFI-IRKGFNLEGSVA-- 500
           AL ++  M +A ++ DSIT    +SA   + L+++   + L  F+ +    N++ ++   
Sbjct: 619 ALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSL--FVSMETEHNIKPTLEHY 676

Query: 501 SSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMINA 537
           +S + +  R G L+ A +   N     D+ +W +++N+
Sbjct: 677 ASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNS 714



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 242/525 (46%), Gaps = 64/525 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           +Y KCG +    +LF+++ +R + +WN ++ + V   +     + +  M++  G+ VD F
Sbjct: 240 LYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHF 299

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +   ++ ACA       G ++H L LK G +S   + +SL+  Y KC        LF+ M
Sbjct: 300 SLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETM 359

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSS---- 174
             + DV+ W  +I++Y   G    A+ +F +M +   ++ NA   +A L   +D S    
Sbjct: 360 PIR-DVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNA--VLAGLSRNDDGSRALE 416

Query: 175 --FETL--GMEIHAATVKS-------------GQNLQVYV-----------ANALIAMYA 206
              E L  G+EI   T+ S              Q +Q +V             AL+ MY 
Sbjct: 417 LFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYT 476

Query: 207 RCGKMTEAAGVLYQ--LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVC 263
           RCG+M +A  + YQ  LEN  +    SM+ G+ +N    +A+  F   Q  G    D+V 
Sbjct: 477 RCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVM 536

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
           + + +S  G +G    GK++H +A+K G +++  +GN  + MY+KC  ++   RVF  M 
Sbjct: 537 STSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMN 596

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA-----------C 372
            QD +SW  ++AG+  +    KAL +++ ++  G+  D +    ++ A           C
Sbjct: 597 MQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSC 656

Query: 373 SGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWT 431
             L    +T+    + I+  L       + + V G+ G ++ +     ++    DV  W 
Sbjct: 657 RSLFVSMETE----HNIKPTLEHYA---SFISVLGRWGLLEEAEQTIRNMPLEPDVYVWR 709

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESD---SITLVSALSAAS 473
           ++++S   N   NE LE     N   VE     S  L S L +AS
Sbjct: 710 ALLNSCRIN--KNERLEKLAARNILAVEPKDPLSYILKSNLYSAS 752


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/741 (35%), Positives = 408/741 (55%), Gaps = 51/741 (6%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D+V WN  I+ +  +GQC  AL LF  M R     ++ ++ A +  C  +    L  ++ 
Sbjct: 48  DIVKWNIAITNHMRNGQCDSALRLFNSMPR----RSSISWNAMISGCLSNDKFYLARQL- 102

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
               +      +   N +I+   R   +  A  +  Q+  +D VSWN+ML+G+ QN    
Sbjct: 103 ---FEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVK 159

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL-NGKELHAYAIKQGFVS-DLQIGNT 301
           +A + F          D++   N++S +G L   + NG+   A  + +     +L   N 
Sbjct: 160 EAKEIF----------DEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNC 209

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR---------- 351
           +M  Y K   +     +F +M  +D +SW T+I+GYAQN   L+A  LF           
Sbjct: 210 MMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTW 269

Query: 352 TVQLEGLDADVMI-----------------IGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           T  + G   + M+                   +++      K M Q +E+   +  + +S
Sbjct: 270 TAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVS 329

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
                N ++  Y + G+I  +RN F+ +  +D +SW ++I+ Y  +G   EAL LF  M 
Sbjct: 330 SW---NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMK 386

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
                 +  T  S LS  + ++ L+ GK+++G +++ G      V ++L+ MY +CG +D
Sbjct: 387 RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNID 446

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A  VF  ++ K+++ W +MI     HG GK A+ LF  M+     PD +T + +L ACS
Sbjct: 447 DAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACS 506

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           H+GL+++G ++   M  DY +    +HY C++DLLGRA  L++A   +++M  EP A  W
Sbjct: 507 HTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATW 566

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALLGA R+H N ELGE  AK + E++P N G YVL+SN++AAS +W DV ++R+RMR  
Sbjct: 567 GALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDR 626

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           G+KK PG SW+E+ NKIH+F   D  H E D IY  L E+  K+++E GYV+ T+ VLH+
Sbjct: 627 GVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKE-GYVSSTKLVLHD 685

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           VEEEEKV ML  HSE+LA+A+G+L    G  IR+ KNLRVC DCH+  K +S++ GR ++
Sbjct: 686 VEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLII 745

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RD++RFHHF  G CSCGDYW
Sbjct: 746 LRDSHRFHHFNGGQCSCGDYW 766



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 163/604 (26%), Positives = 279/604 (46%), Gaps = 88/604 (14%)

Query: 3   GKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFP 62
           G+C S L   +LF+ + +R+  +WNAM+   +SN +     + + +M     + D  ++ 
Sbjct: 63  GQCDSAL---RLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKM----PTRDLVSWN 115

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
            +I  C   ++L                                   R AR LFD+M E+
Sbjct: 116 VMISGCVRYRNL-----------------------------------RAARLLFDQMPER 140

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            DVV WN+++S Y+ +G   EA  +F EM       N+ ++   L A      +   +E 
Sbjct: 141 -DVVSWNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNGMLAA----YVQNGRIED 191

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
                +S  + ++   N ++  Y +  ++ +A G+  ++  +D VSWN+M++G+ QN   
Sbjct: 192 ARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGEL 251

Query: 243 CKAMQFFRE---------------------LQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
            +A + F E                     L  A +  D +   N+VS +  +   +  K
Sbjct: 252 LEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCK 311

Query: 282 EL-HAYAIKQGFV-SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
            +  A  + +     ++   NT++  YA+   +      F +M  +D ISW  IIAGYAQ
Sbjct: 312 RMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQ 371

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVI 398
           +    +AL LF  ++ +G   +     S L  C+ +  +   K++HG +++ GL S   +
Sbjct: 372 SGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYV 431

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            NA++ +Y KCGNID +  VFE IE K+VVSW +MI+ Y  +G   EAL LF  M +  +
Sbjct: 432 GNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGI 491

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIA- 516
             D +T+V  LSA S   ++ KG E    + +  G        + ++D+  R G LD A 
Sbjct: 492 LPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQ 551

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDH---ITFLALL 570
           N + N     D   W +++ A+ +HG    G+ A  + ++ME     PD+      L+ L
Sbjct: 552 NLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEME-----PDNSGMYVLLSNL 606

Query: 571 YACS 574
           YA S
Sbjct: 607 YAAS 610



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 187/380 (49%), Gaps = 20/380 (5%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGISVDA 58
           Y + G +L+A++LF++   R VFTW AM+  YV NG   E  RV +            ++
Sbjct: 245 YAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK-------NS 297

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            ++  +I      K +D   ++    + C   S+    N+++  YA+  D  +AR  FDR
Sbjct: 298 VSWNAIIAGYVQCKRMDQARELFE-AMPCQNVSS---WNTMITGYAQNGDIAQARNFFDR 353

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M ++ D + W +II+ Y+ SG   EAL LF EM+R G   N  TF + L  C + +   L
Sbjct: 354 MPQR-DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALEL 412

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++H   VK+G     YV NAL+ MY +CG + +A  V   +E K+ VSWN+M+ G+ +
Sbjct: 413 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR 472

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GFVSDL 296
           +    +A+  F  ++  G  PD V  V  +SA    G +  G E + Y++ Q  G  ++ 
Sbjct: 473 HGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTE-YFYSMTQDYGITANS 531

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQ 354
           +    ++D+  +   ++    +   M  + D  +W  ++ A     N  L         +
Sbjct: 532 KHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE 591

Query: 355 LEGLDADVMIIGSVLMACSG 374
           +E  ++ + ++ S L A SG
Sbjct: 592 MEPDNSGMYVLLSNLYAASG 611



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 15/285 (5%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +  A   FD++ QR   +W A++  Y  +G     L  +  M+  G  ++  TF
Sbjct: 338 YAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTF 397

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              +  CA +  L+ G ++HG V+K G +S  ++ N+L+ MY KC +   A  +F+ + E
Sbjct: 398 TSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE 457

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           KE VV WN++I+ Y+  G   EAL LF  M++ G++ +  T V  L AC  +     G E
Sbjct: 458 KE-VVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTE 516

Query: 182 -IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG---F 236
             ++ T   G          +I +  R G++ +A  ++  +    D+ +W ++L      
Sbjct: 517 YFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIH 576

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQ----VCTVNAVSASGRLGNL 277
              +L  KA +   E++     PD     V   N  +ASGR G++
Sbjct: 577 GNTELGEKAAKMIFEME-----PDNSGMYVLLSNLYAASGRWGDV 616



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 1/140 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++ DA  +F+ + ++ V +WN M+  Y  +G     L  +  M+  GI  D  T
Sbjct: 438 MYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVT 497

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    +D G +  + +    G  +       ++ +  +      A+ L   M
Sbjct: 498 MVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNM 557

Query: 120 GEKEDVVLWNSIISAYSASG 139
             + D   W +++ A    G
Sbjct: 558 PFEPDAATWGALLGASRIHG 577


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/579 (39%), Positives = 359/579 (62%), Gaps = 24/579 (4%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV------------------NYMGR---- 317
           GKE+H +++K G VSD+ + N LM MY++C  +                  + M R    
Sbjct: 128 GKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT 187

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           +FY  + +  +SWT +IAGY + N   +   LF  +  E +  + + + S++++C  +  
Sbjct: 188 LFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGA 247

Query: 378 MSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           +   K +H YI+R G    L +  A+VD+YGKCG I  +R +F+S+++KDV++WT+MIS+
Sbjct: 248 VQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISA 307

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           Y      + A +LF  M +  V  + +T+VS LS  +    L  GK  + +I ++G  ++
Sbjct: 308 YAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVD 367

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             + ++L+DMYA+CG +  A ++F+    +D+  W  M+   G+HG G+ A+ LF +ME 
Sbjct: 368 VILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMET 427

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
               P+ ITF+  L+ACSH+GL+ EGK   E M  D+ L P  EHY C+VDLLGRA  L+
Sbjct: 428 LGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLD 487

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EAY+ + SM + P   +W A+L AC++H N  +GE+ A++LL L+P N G  VL+SN++A
Sbjct: 488 EAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYA 547

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           A+ +W DV  +R  ++ +G+KK PG S IE+   +H F   D +H   ++I + LAE+++
Sbjct: 548 AANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSK 607

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           KL +E GY+  T  VLHN++EEEK   L  HSE+LA+A+G++ +  G+ IR+ KNLR+C 
Sbjct: 608 KL-KEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICD 666

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCH+  KL+S+++ R ++VRD NRFHHF  G CSCG YW
Sbjct: 667 DCHTVTKLLSKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 223/453 (49%), Gaps = 26/453 (5%)

Query: 9   LDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKAC 68
           LD  Q       RT F     +        P   L TY+ MR L I VD+F  P V+KAC
Sbjct: 60  LDQTQQLHAHITRTHFNHAQQVSFSPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKAC 119

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE----- 123
           + +     G +IHG  +K G  S  F+VN+L+ MY++C     AR LFD+M E++     
Sbjct: 120 SQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWS 179

Query: 124 ----------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
                            +V W ++I+ Y       E   LF  M    +  N  T ++ +
Sbjct: 180 TMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLI 239

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
            +C       LG  +HA  +++G  + + +A AL+ MY +CG++  A  +   ++NKD +
Sbjct: 240 ISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVM 299

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           +W +M++ + Q +    A Q F +++  G +P+++  V+ +S     G L  GK  HAY 
Sbjct: 300 TWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYI 359

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
            KQG   D+ +   L+DMYAKC  ++   R+F +   +D  +W  ++AGY  +    KAL
Sbjct: 360 DKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKAL 419

Query: 348 ELFRTVQLEGLDA-DVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLV-ILNAIVD 404
           +LF  ++  G+   D+  IG+ L ACS    + + K +   +I   GL   V     +VD
Sbjct: 420 KLFTEMETLGVKPNDITFIGA-LHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVD 478

Query: 405 VYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
           + G+ G +D +  + ES+  + ++  W +M+++
Sbjct: 479 LLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 180/361 (49%), Gaps = 27/361 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVS--NGEPLRVLETYSRM--------- 49
           MY +CGS++ A  LFDK+S+R V +W+ M+ AY++   G   R + +++ M         
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 50  -----RVLGISVDAFTFP------CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS 98
                R+    ++   FP       +I +C  +  +  G ++H  +L+ G+  +  +  +
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE-ALGLFREMQRVGLV 157
           LV MY KC + R AR +FD M  K DV+ W ++ISAY A   C++ A  LF +M+  G+ 
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNK-DVMTWTAMISAY-AQANCIDYAFQLFVQMRDNGVR 330

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            N  T V+ L  C  +    +G   HA   K G  + V +  ALI MYA+CG ++ A  +
Sbjct: 331 PNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRL 390

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             +  ++D  +WN M+ G+  +    KA++ F E++  G KP+ +  + A+ A    G +
Sbjct: 391 FSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLV 450

Query: 278 LNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIA 335
           + GK L    I   G V  ++    ++D+  +   ++   ++   M     I+ W  ++A
Sbjct: 451 VEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLA 510

Query: 336 G 336
            
Sbjct: 511 A 511



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 26/218 (11%)

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL  +  M + ++E DS  + S L A S +S+ + GKE++GF ++ G   +  V ++L+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINA-----NGLHGRGKVAID----------- 549
           MY+ CG+L  A  +F+ +  +D++ W++MI A      G   R  V+             
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 550 ------LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHY 602
                 LF +M  E+  P+ IT L+L+ +C   G +  GK+    I+R  + +       
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMS--LALA 270

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
             LVD+ G+   +  A     SM+       W A++ A
Sbjct: 271 TALVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMISA 307


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/804 (32%), Positives = 422/804 (52%), Gaps = 78/804 (9%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG- 155
           N ++  YAK      A +LFDRM  + DV  WN+++S Y  + + L+ L  F  M R G 
Sbjct: 75  NIMMNGYAKQGSLSDAEELFDRM-PRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGD 133

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
            + NA+TF   +++C       L  ++     K        V  AL+ M+ RCG +  A+
Sbjct: 134 SLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFAS 193

Query: 216 GVLYQLEN-------------------------------KDSVSWNSMLTGFVQNDLYCK 244
            +  Q+E                                +D VSWN M+    Q+    +
Sbjct: 194 RLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVRE 253

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+    E+   G + D     ++++A  RL +L  GK+LHA  I+     D  + + L++
Sbjct: 254 ALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIE 313

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +YAKC       RVF  +  ++ +SWT +I G  Q  C  K++ELF  ++ E +  D   
Sbjct: 314 LYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFA 373

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + +++  C     +   +++H   ++ G +  +V+ N+++ +Y KCG++  +  VF S+ 
Sbjct: 374 LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS 433

Query: 424 SKDVVSWTSMISSY-------------------------------VHNGLANEALELFY- 451
            +D+VSWTSMI++Y                               + +G   + L+++  
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSA 493

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           ++++ +V  D +T V+     + +   K G ++ G  ++ G  L  SVA++ + MY++CG
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCG 553

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            +  A K+F+ +  KD++ W +MI     HG GK A   F  M ++   PD+I+++A+L 
Sbjct: 554 RISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLS 613

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
            CSHSGL+ EGK + ++M   + + P  EH++C+VDLLGRA HL EA   +  M ++PTA
Sbjct: 614 GCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTA 673

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
           EVW ALL AC++H N EL E+ AK + ELD  + G+Y+L++ +++ + K  D  QVR  M
Sbjct: 674 EVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLM 733

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           R  G+KK PG SW+E+ NK+H F A D SH +   I  KL E+ EK+    GYV      
Sbjct: 734 RDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHL-GYV------ 786

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
                  E  +    HSE+LA+A+G++       I I KNLR+C DCH+  KL+S +  R
Sbjct: 787 -----RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDR 841

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E V+RD  RFHHF++G CSCGDYW
Sbjct: 842 EFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  275 bits (704), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 189/656 (28%), Positives = 324/656 (49%), Gaps = 69/656 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFT 60
           Y K GS+ DAE+LFD++ +R V +WN ++  Y      L  LET+  M   G S+ +AFT
Sbjct: 81  YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFT 140

Query: 61  FPCVIKACAMLK-------------------DLDCGAKIHGLVLKCGY------------ 89
           F CV+K+C  L                    D D    +  + ++CGY            
Sbjct: 141 FCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE 200

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
             T F  NS++A YAK Y    A + F+ M E+ DVV WN +I+A S SG+  EALGL  
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAER-DVVSWNMMIAALSQSGRVREALGLVV 259

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EM R G+  ++ T+ ++L AC        G ++HA  ++S   +  YVA+ALI +YA+CG
Sbjct: 260 EMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCG 319

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
              EA  V   L++++SVSW  ++ G +Q + + K+++ F +++      DQ      +S
Sbjct: 320 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 379

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
                 +L  G++LH+  +K G    + + N+L+ +YAKC  +     VF  M+ +D +S
Sbjct: 380 GCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 439

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQL---------------EGLDADVMIIGSVLMA--- 371
           WT++I  Y+Q    +KA E F  +                  G + D + + S +++   
Sbjct: 440 WTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 499

Query: 372 --------------CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
                         C+ +       +I G+ ++ GL  ++ + NA + +Y KCG I  ++
Sbjct: 500 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQ 559

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F+ +  KDVVSW +MI+ Y  +G+  +A + F  M     + D I+ V+ LS  S   
Sbjct: 560 KLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 619

Query: 477 ILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSM 534
           ++++GK     + R  G +      S +VD+  R G L  A  + + +  K    +W ++
Sbjct: 620 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 679

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           ++A  +HG  ++A +L  K   E  +PD  +++ L    S +G  ++  +  ++MR
Sbjct: 680 LSACKIHGNDELA-ELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMR 734



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 227/508 (44%), Gaps = 79/508 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYV-------------------------- 34
           M+ +CG V  A +LF ++ + T+F  N+ML  Y                           
Sbjct: 182 MFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMM 241

Query: 35  -----SNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                 +G     L     M   G+ +D+ T+   + ACA L  L  G ++H  V++   
Sbjct: 242 IAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP 301

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCL-EALGLF 148
               ++ ++L+ +YAKC  F++A+++F+ + ++  V  W  +I   S   +C  +++ LF
Sbjct: 302 QIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS-WTVLIGG-SLQYECFSKSVELF 359

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            +M+   +  + +     +  C +     LG ++H+  +KSG N  + V+N+LI++YA+C
Sbjct: 360 NQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKC 419

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL---------------- 252
           G +  A  V   +  +D VSW SM+T + Q     KA +FF  +                
Sbjct: 420 GDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYI 479

Query: 253 -QGA------------GQK---PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             GA             QK   PD V  V        +G    G ++  + +K G + ++
Sbjct: 480 QHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNV 539

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N  + MY+KC  ++   ++F  +  +D +SW  +I GY+Q+    +A + F  +  +
Sbjct: 540 SVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSK 599

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTK-------EIHGYIIRKGLSDLVILNAIVDVYGKC 409
           G   D +   +VL  CS    + + K        +HG  I  GL      + +VD+ G+ 
Sbjct: 600 GAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHG--ISPGLEH---FSCMVDLLGRA 654

Query: 410 GNIDYSRNVFESIESKDVVS-WTSMISS 436
           G++  ++++ + +  K     W +++S+
Sbjct: 655 GHLTEAKDLIDKMPMKPTAEVWGALLSA 682



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 199/437 (45%), Gaps = 37/437 (8%)

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V   N ++  YA+ G +++A  +  ++  +D  SWN++++G+ Q   +   ++ F  + 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 254 GAGQK-PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
            +G   P+       + + G LG      +L     K  F  D  +   L+DM+ +C  V
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189

Query: 313 NYMGRVFYQ-------------------------------MTAQDFISWTTIIAGYAQNN 341
           ++  R+F Q                               M  +D +SW  +IA  +Q+ 
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILN 400
              +AL L   +  +G+  D     S L AC+ L  +   K++H  +IR     D  + +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A++++Y KCG+   ++ VF S++ ++ VSWT +I   +     ++++ELF  M    +  
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D   L + +S   +   L  G++L+   ++ G N    V++SL+ +YA+CG L  A  VF
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF 429

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
           + +  +D++ WTSMI A    G    A + F  M+      + IT+ A+L A    G   
Sbjct: 430 SSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTR----NAITWNAMLGAYIQHGAEE 485

Query: 581 EGKKFLEIMRCDYQLDP 597
           +G K    M     + P
Sbjct: 486 DGLKMYSAMLSQKDVTP 502



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 143/317 (45%), Gaps = 38/317 (11%)

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
           GL + V +  ++L A      +S  + +    I++   +++  N +++ Y K G++  + 
Sbjct: 34  GLASAVFLQNTLLHAYFSCGALSDARRLLRADIKE--PNVITHNIMMNGYAKQGSLSDAE 91

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA-NVESDSITLVSALSAASSL 475
            +F+ +  +DV SW +++S Y       + LE F  M+ + +   ++ T    + +  +L
Sbjct: 92  ELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGAL 151

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ----------- 524
              +   +L G   +  F  +  V ++LVDM+ RCG +D A+++F+ ++           
Sbjct: 152 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 211

Query: 525 --------------------TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
                                +D++ W  MI A    GR + A+ L  +M  +    D  
Sbjct: 212 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 271

Query: 565 TFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
           T+ + L AC+    +  GK+   +++R   Q+DP+    + L++L  +    +EA +   
Sbjct: 272 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA--SALIELYAKCGSFKEAKRVFN 329

Query: 624 SMQIEPTAEVWCALLGA 640
           S+Q +  +  W  L+G 
Sbjct: 330 SLQ-DRNSVSWTVLIGG 345


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/769 (33%), Positives = 429/769 (55%), Gaps = 14/769 (1%)

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
           LD G KIH  V++ GY    F+ N L+ MYA+    R A  L DRM  + + V WN++I 
Sbjct: 28  LDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRM-PRRNAVSWNAVIR 86

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
           A + +G    +L  F+ M + G V +A  F++ ++A         G  +     KSG + 
Sbjct: 87  ANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKA---PGTIQEGEIVQDFAKKSGFDR 143

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
              V  ALI MY RCG++  A     +++ +  VSWN+++T + + D   ++++ FRE+ 
Sbjct: 144 SFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREML 203

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLN--GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
             G  P+ V  +   SA   +   +   G  +HA +I  G +S   + N++++++ +   
Sbjct: 204 LQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGRGGN 263

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           ++    +F ++  +D  SW T+IA +A+N    +AL+L+  + +     D +   +VL A
Sbjct: 264 ISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMTIR---PDGVTFVNVLEA 320

Query: 372 CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           C     + + + IH      G  SDL++  A+V +Y +CG +D +  VF +I+   V++ 
Sbjct: 321 CDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITL 380

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFII 489
            ++I+++   G A+ +L  F  M +  +     TLV+ L A ++        ++L+ ++ 
Sbjct: 381 NAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMA 440

Query: 490 RKGFNLEGS---VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
               + +     V ++LV+MYA+CG LD A  +F+     ++  W +++     HG   +
Sbjct: 441 ECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADM 500

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           A+ L Y+M+    +PD I+F A L A SH+  + +G +    +  DY L P  EHY  +V
Sbjct: 501 AVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVV 560

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           DLLGRA  LEEA  F+RSM I   A  W ALLGACR+H +++     A+ ++ +DP +  
Sbjct: 561 DLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGA 620

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
           +Y ++SNV++A+ +W + E++R RM  +G +K PG SWIE+ N++H F  +D+SH  + E
Sbjct: 621 SYTVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGE 680

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
           IY++L E+   L+ E  YV     VLH+VE+E +  +L+ HSE+LA+ +G++ + EGS I
Sbjct: 681 IYERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKI 740

Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            I KNLR+C DCH   KL S+   RE+VVRD  RFHHF  G CSC D W
Sbjct: 741 TIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 152/525 (28%), Positives = 267/525 (50%), Gaps = 17/525 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +  S  DAE L D++ +R   +WNA++ A    G+  R L  + RM   G   DA  
Sbjct: 56  MYARLESSRDAELLLDRMPRRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVV 115

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IKA   +++   G  +     K G+D +  +  +L+ MY +C    +A+  FDR+ 
Sbjct: 116 FLSLIKAPGTIQE---GEIVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQ 172

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTF--VAALQACEDSSFETL 178
           E+  VV WN++I+ YS   +  ++L +FREM   G+  NA T   +A+  A   +   T 
Sbjct: 173 ER-GVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTC 231

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  IHA ++ SG      VAN++I ++ R G ++ A  +  +++ +D  SWN+M+  F +
Sbjct: 232 GNLIHACSIDSGLISVTTVANSIINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAK 291

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N    +A+  +  +     +PD V  VN + A     +L  G+ +H  A   G+ SDL +
Sbjct: 292 NGHVFEALDLYGRMT---IRPDGVTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIV 348

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
              L+ MY +C  ++    VF  +     I+   IIA +AQ      +L  FR +   G+
Sbjct: 349 ATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGI 408

Query: 359 DADVMIIGSVL-MACSGLKCMSQTKEIHGYIIR-KG---LSDLVILNAIVDVYGKCGNID 413
                 + +VL    +     S  +++H ++    G     D+++ NA+V++Y KCG++D
Sbjct: 409 RPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLD 468

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +R +F++    +V +W ++++ Y  +G A+ A+ L Y M  A +  D I+  +ALSA+S
Sbjct: 469 AARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFTAALSASS 528

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA 516
               ++ G  +  + I + + L  SV    ++VD+  R G L+ A
Sbjct: 529 HARQVEDGARIF-YAISRDYGLIPSVEHYGAVVDLLGRAGWLEEA 572



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 212/403 (52%), Gaps = 9/403 (2%)

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
           ++S+    G +IH   ++SG    ++++N L+ MYAR     +A  +L ++  +++VSWN
Sbjct: 23  DESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWN 82

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           +++    Q   + +++ FF+ +   G  PD V  ++ + A    G +  G+ +  +A K 
Sbjct: 83  AVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAP---GTIQEGEIVQDFAKKS 139

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           GF     +G  L+ MY +C  ++     F ++  +  +SW  +I  Y++ +   ++L +F
Sbjct: 140 GFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVF 199

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQT--KEIHGYIIRKGL-SDLVILNAIVDVYG 407
           R + L+G+  + + I  +  A +G+     T    IH   I  GL S   + N+I++++G
Sbjct: 200 REMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINLFG 259

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           + GNI  +  +FE ++ +DV SW +MI+++  NG   EAL+L+  M    +  D +T V+
Sbjct: 260 RGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRM---TIRPDGVTFVN 316

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            L A      L++G+ ++      G++ +  VA++LV MY RCG LD A +VF  +Q   
Sbjct: 317 VLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPG 376

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           +I   ++I A+   GR   ++  F +M      P   T +A+L
Sbjct: 377 VITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVL 419



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 212/430 (49%), Gaps = 12/430 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYG+CG +  A+  FD++ +R V +WNA++  Y    E  + L  +  M + GI+ +A T
Sbjct: 154 MYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVT 213

Query: 61  FPCVIKACAML--KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
             C+  A A +  K   CG  IH   +  G  S   + NS++ ++ +  +  +A ++F++
Sbjct: 214 IICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGRGGNISRANEIFEK 273

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           + ++ DV  WN++I+A++ +G   EAL L+    R+ +  +  TFV  L+AC+       
Sbjct: 274 V-DQRDVCSWNTMIAAFAKNGHVFEALDLY---GRMTIRPDGVTFVNVLEACDCPDDLER 329

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  IH      G +  + VA AL++MY RCG++  AA V   +++   ++ N+++    Q
Sbjct: 330 GESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQ 389

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAV-SASGRLGNLLNGKELHAYAIK---QGFVS 294
                 ++  FR++   G +P +   V  + + +        G++LH +  +        
Sbjct: 390 FGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPH 449

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D+ + N L++MYAKC  ++    +F      +  +W  I+AGYAQ+     A+ L   +Q
Sbjct: 450 DILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQ 509

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLV-ILNAIVDVYGKCGNI 412
           L G+  D +   + L A S  + +     I   I R  GL   V    A+VD+ G+ G +
Sbjct: 510 LAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWL 569

Query: 413 DYSRNVFESI 422
           + +     S+
Sbjct: 570 EEAEGFLRSM 579


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/583 (40%), Positives = 365/583 (62%), Gaps = 9/583 (1%)

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           G +PD       + A   L +   G  +H   +K G+ S + I N+L+ MY KC      
Sbjct: 5   GIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELS 64

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
            +VF +M  ++ +SW+ II    Q++   +   LFR +  EG        G++L A + +
Sbjct: 65  RQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNAMACV 121

Query: 376 KCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           +   +  +++  ++  GL  D  + +A   ++ +CG ++ +R +F+ I SKD+V+W + I
Sbjct: 122 RSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTI 181

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF- 493
            +YV   +  EAL L   M    +  D+ITL+  + A S+L+  +    ++G II  GF 
Sbjct: 182 EAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGFF 240

Query: 494 -NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
            N   +V ++L+D+Y +CG+L  A KVF+ +Q +++I W++MI+  G+HG G+ A++LF 
Sbjct: 241 YNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFD 300

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           +M+A S  PDHITF+++L ACSHSGL+ EG +    M  D+ + P PEHYAC+VD+LGRA
Sbjct: 301 QMKA-SVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRA 359

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
             L+EA  F+  M + P A VW ALLGACR+H N +L E+VA+ L +LDP N G YV++ 
Sbjct: 360 GKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILY 419

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           N++  + K K+ + +R  M+  G+KK  G S IEI NK+++F+A D+SH ++D IY +L 
Sbjct: 420 NIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELE 479

Query: 733 EITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNL 792
            + +++ +E GY     FVLH+V+EE K  MLY HSE+LAI +G+L    GS+IRI KNL
Sbjct: 480 RLMDRIRQE-GYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNL 538

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           RVC DCH+  K +S++ GRE+VVRDA+RFHHF+ G CSC DYW
Sbjct: 539 RVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 209/396 (52%), Gaps = 10/396 (2%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M R+G+  + +TF   ++AC        G+ IH   VK G   QV+++N+LI MY +C K
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
              +  V  ++ +K++VSW++++   +Q+D   +    FR++   G +P +   +NA++ 
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMAC 120

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
              + +     +++   ++ G   D  + +    M+A+C  V    ++F  + ++D ++W
Sbjct: 121 ---VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
            T I  Y + +  L+AL L + + L+G+  D + +  V+ ACS L        +HG II 
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IIT 236

Query: 391 KGL---SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
            G      L +  A++D+Y KCG++ Y+R VF+ ++ +++++W++MIS Y  +G   EAL
Sbjct: 237 TGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREAL 296

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDM 506
            LF  M +A+V+ D IT VS LSA S   ++ +G E    + R  G        + +VD+
Sbjct: 297 NLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDI 355

Query: 507 YARCGALDIANKVFNCVQTK-DLILWTSMINANGLH 541
             R G LD A      +  + +  +W +++ A  +H
Sbjct: 356 LGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIH 391



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 198/398 (49%), Gaps = 21/398 (5%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M  LGI  D FTFP +IKAC+ L+  + G +IH  V+K GY S  FI NSL+ MY KC  
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
           +  +RQ+FD M +K + V W++II A     +C E   LFR+M   G   +    + A+ 
Sbjct: 61  YELSRQVFDEMPDK-NAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM- 118

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           AC  S  E    +++   V++G +    V +A   M+ARCG++  A  +   + +KD V+
Sbjct: 119 ACVRSHEE--ADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVT 176

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           W + +  +V+ D+  +A+   +++   G  PD +  +  + A   L +      +H   I
Sbjct: 177 WATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-II 235

Query: 289 KQGFVSD--LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
             GF  +  L +   L+D+Y KC  + Y  +VF  M  ++ I+W+ +I+GY  +    +A
Sbjct: 236 TTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREA 295

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVIL 399
           L LF  ++   +  D +   S+L ACS       G +C +      G   R         
Sbjct: 296 LNLFDQMK-ASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEH-----Y 349

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
             +VD+ G+ G +D + +  E +  + +   W +++ +
Sbjct: 350 ACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGA 387



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 161/329 (48%), Gaps = 14/329 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC     + Q+FD++  +   +W+A++GA + +    R  E +S  R +       +
Sbjct: 54  MYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDD---RCKEGFSLFRQMLSEGSRPS 110

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A A ++  +    ++ +V++ G D    + ++   M+A+C     AR+LFD + 
Sbjct: 111 RGAILNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIM 170

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+V W + I AY  +   LEALGL ++M   G+  +A T +  ++AC   +   L  
Sbjct: 171 SK-DLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAH 229

Query: 181 EIHA-ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +H   T     N  + V  ALI +Y +CG +T A  V   ++ ++ ++W++M++G+  +
Sbjct: 230 IVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMH 289

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  F +++ A  KPD +  V+ +SA    G +  G E      +   V+     
Sbjct: 290 GWGREALNLFDQMK-ASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRP-- 346

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
               + YA  C V+ +GR      A DFI
Sbjct: 347 ----EHYA--CMVDILGRAGKLDEACDFI 369



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 17/242 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ +CG V  A +LFD +  + + TW   + AYV    PL  L    +M + GI  DA T
Sbjct: 152 MFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAIT 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVA-------MYAKCYDFRKAR 113
              VI+AC+ L        +HG++      +T F  N L+A       +Y KC     AR
Sbjct: 212 LLGVIRACSTLASFQLAHIVHGII------TTGFFYNQLLAVETALIDLYVKCGSLTYAR 265

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           ++FD M E+ +++ W+++IS Y   G   EAL LF +M +  +  +  TFV+ L AC  S
Sbjct: 266 KVFDGMQER-NIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACSHS 323

Query: 174 SFETLGMEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNS 231
                G E   +  +  G   +      ++ +  R GK+ EA   + ++  + + + W +
Sbjct: 324 GLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGA 383

Query: 232 ML 233
           +L
Sbjct: 384 LL 385



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 1/124 (0%)

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M    ++ D+ T    + A S L   + G  ++  +++ G+  +  +++SL+ MY +C  
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
            +++ +VF+ +  K+ + W+++I A     R K    LF +M +E   P     L  + A
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM-A 119

Query: 573 CSHS 576
           C  S
Sbjct: 120 CVRS 123


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/740 (33%), Positives = 414/740 (55%), Gaps = 5/740 (0%)

Query: 6    GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
            G +  A  L  K+   +   WNA++  +  +G    VL  Y  MR  G+     TF  ++
Sbjct: 273  GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASML 332

Query: 66   KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
             A A +K    G ++H   +  G D+  F+ +SL+ +YAKC     A+ +FD   EK ++
Sbjct: 333  SAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEK-NI 391

Query: 126  VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
            V+WN++++ +  +    EA+ +F+ M R  L T+ +TFV+ L AC   S   LG ++H  
Sbjct: 392  VMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCV 451

Query: 186  TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
            T+K+  ++ ++VANA + MY++ G + +A  +   +  KDS+SWN++  G  QN    +A
Sbjct: 452  TIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEA 511

Query: 246  MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
            +   + ++  G  PD V    A++A   +     GK++H  AIK G  S+  +G++L+D+
Sbjct: 512  VCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDL 571

Query: 306  YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
            Y+K   V    ++F Q+ A   +    +IAG+ QNN   +A++LF+ V  +GL    +  
Sbjct: 572  YSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTF 631

Query: 366  GSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNI-DYSRNVFESI 422
             S+L  CSG    +  K++H Y ++ G+   D ++  ++  +Y K   + D ++ + E  
Sbjct: 632  SSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMP 691

Query: 423  ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
            + K++  WT++IS Y  NG  + +L  F+ M   NV SD  T  S L A S ++    GK
Sbjct: 692  DHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGK 751

Query: 483  ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLH 541
            E++G I + GF    +  S+L+DMY++CG +  + + F  ++ K D++ W SMI     +
Sbjct: 752  EIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKN 811

Query: 542  GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
            G    A+ LF KME     PD +TFL +L AC+HSGLI+EG+ F   MR  Y L P  +H
Sbjct: 812  GYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDH 871

Query: 602  YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
            YAC +DLLGR  HL+EA + +  +   P   VW   L ACR+H ++E G+I A+KL+EL+
Sbjct: 872  YACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELE 931

Query: 662  PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
            P     YVL+S++ AA+  W + +  R  MR  G+ K PG SWI +GNK   F+ +DK H
Sbjct: 932  PQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYH 991

Query: 722  SESDEIYKKLAEITEKLERE 741
             ++  IY+ L ++T  ++++
Sbjct: 992  PDNLRIYEMLGDLTGMMKKD 1011



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 288/568 (50%), Gaps = 14/568 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG   DA+ +FD   ++ +  WNAML  +V N  P   +  +  M    +  D FT
Sbjct: 369 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFT 428

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ AC  L     G ++H + +K   D + F+ N+ + MY+K      A+ LF  + 
Sbjct: 429 FVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP 488

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D + WN++    + + +  EA+ + + M+  G+  +  +F  A+ AC +      G 
Sbjct: 489 YK-DSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K G      V ++LI +Y++ G +  +  +  Q++    V  N+++ GFVQN+
Sbjct: 548 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 607

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSA-SGRLGNLLNGKELHAYAIKQGFV-SDLQI 298
              +A+Q F+++   G KP  V   + +S  SG L + + GK++H Y +K G +  D  +
Sbjct: 608 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAI-GKQVHCYTLKSGVLYDDTLL 666

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           G +L  +Y K   +    ++  +M   ++   WT II+GYAQN     +L  F  ++   
Sbjct: 667 GVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCN 726

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSR 416
           + +D     SVL ACS +   +  KEIHG I + G        +A++D+Y KCG++  S 
Sbjct: 727 VRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSF 786

Query: 417 NVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             F+ +++K D++ W SMI  +  NG A+EAL LF  M E  ++ D +T +  L A +  
Sbjct: 787 EAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHS 846

Query: 476 SILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWT 532
            ++ +G+   G  +RK + L   +   +  +D+  R G L  A +  + +  + D ++W 
Sbjct: 847 GLISEGRHFFG-SMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWA 905

Query: 533 SMINANGLHG---RGKVAIDLFYKMEAE 557
           + + A  +H    RGK+A     ++E +
Sbjct: 906 TYLAACRMHKDEERGKIAARKLVELEPQ 933



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 275/578 (47%), Gaps = 38/578 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
           +Y K G V  A        +R     +++L  +  +G P  VL  +  +R   G   D F
Sbjct: 100 LYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQF 159

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
               V+ AC+ +  L  G ++H  V+K G+ S+ F   +LV MYAKC D   AR++FD +
Sbjct: 160 GLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGI 219

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               D + W+S+I+ Y   G   EAL LF  M ++G   +  T V               
Sbjct: 220 A-CPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLV--------------- 263

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                                +I+  A  G++  A  +L ++    +V+WN++++G  Q+
Sbjct: 264 --------------------TIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQS 303

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L    +  +++++  G  P +    + +SA+  +   + G+++HA A+  G  +++ +G
Sbjct: 304 GLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVG 363

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           ++L+++YAKC C +    VF     ++ + W  ++ G+ QN    +A+ +F+ +    L 
Sbjct: 364 SSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQ 423

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            D     S+L AC+ L      K++H   I+  +   L + NA +D+Y K G I  ++ +
Sbjct: 424 TDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKAL 483

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  I  KD +SW ++      N    EA+ +   M    +  D ++  +A++A S++   
Sbjct: 484 FSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRAT 543

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + GK+++   I+ G     +V SSL+D+Y++ G ++ + K+F  V    ++   ++I   
Sbjct: 544 ETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 603

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             +     AI LF ++  +   P  +TF ++L  CS S
Sbjct: 604 VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGS 641



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/574 (24%), Positives = 265/574 (46%), Gaps = 47/574 (8%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +HG +L+ G      + +SLV +Y K      A       GE+      +S++S ++ SG
Sbjct: 78  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAA-SSLLSCHARSG 136

Query: 140 QCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
              + LG FR ++   G   + +     L AC        G ++H   VKSG +  V+  
Sbjct: 137 SPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCE 196

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
            AL+ MYA+CG +  A  V   +   D++ W+SM+  + +   Y +A+  F  +   G  
Sbjct: 197 AALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSA 256

Query: 259 PDQVCTVNAVS---ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           PDQV  V  +S   +SGRL         HA A+ +                         
Sbjct: 257 PDQVTLVTIISTLASSGRLD--------HATALLK------------------------- 283

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
                +M     ++W  +I+G+AQ+      L L++ ++  GL        S+L A + +
Sbjct: 284 -----KMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANM 338

Query: 376 KCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           K   + +++H   +  GL +++ + ++++++Y KCG    ++NVF+    K++V W +M+
Sbjct: 339 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 398

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           + +V N L  EA+ +F  M    +++D  T VS L A + LS    GK+++   I+   +
Sbjct: 399 TGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMD 458

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
           +   VA++ +DMY++ GA+  A  +F+ +  KD I W ++      +   + A+ +  +M
Sbjct: 459 ISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRM 518

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
                 PD ++F   + ACS+      GK+ +  +   Y +       + L+DL  +   
Sbjct: 519 RLHGITPDDVSFSTAINACSNIRATETGKQ-IHCLAIKYGICSNHAVGSSLIDLYSKHGD 577

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           +E + +     Q++ ++ V    L A  V +N E
Sbjct: 578 VESSRKIF--AQVDASSIVPINALIAGFVQNNNE 609



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 15/270 (5%)

Query: 379 SQT-KEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           SQT + +HG I+R G   L  L +++V++Y K G + Y+ +       +   + +S++S 
Sbjct: 72  SQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSC 131

Query: 437 YVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
           +  +G   + L  F Y+   A    D   L   LSA S + +L  G++++  +++ GF+ 
Sbjct: 132 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSS 191

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
                ++LVDMYA+CG +  A +VF+ +   D I W+SMI      G  + A+ LF +M+
Sbjct: 192 SVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 251

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
               APD +T + ++   + SG ++     L+ M       P P   A    + G A   
Sbjct: 252 KMGSAPDQVTLVTIISTLASSGRLDHATALLKKM-------PTPSTVAWNAVISGHAQSG 304

Query: 616 EE-----AYQFVRSMQIEPTAEVWCALLGA 640
            E      Y+ +RS  + PT   + ++L A
Sbjct: 305 LEFNVLGLYKDMRSWGLWPTRSTFASMLSA 334


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/707 (34%), Positives = 394/707 (55%), Gaps = 68/707 (9%)

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           +  N+L++MYA+ G++ +A  V  Q+  +D+VSW  M+ G  +   +  A++ F ++ G 
Sbjct: 98  FTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGE 157

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC------ 309
           G  P Q    N +S+         G+++H++ IK G  S + + N+++ MY KC      
Sbjct: 158 GLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETA 217

Query: 310 -------------------CCVNYMGR------VFYQMTAQDFISWTTIIAGYAQNNCHL 344
                                  + GR      +F  M  +  +SW  IIAGY QN    
Sbjct: 218 RAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDD 277

Query: 345 KALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAI 402
            AL+ F R +    ++ D   + SVL AC+ L+ +   K++H YI+R G+     I+NA+
Sbjct: 278 MALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNAL 337

Query: 403 VDVYGKCGNIDYSRN---------------------------------VFESIESKDVVS 429
           +  Y K G+++ +R                                  VF+ + ++DV++
Sbjct: 338 ISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIA 397

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           WT+MI  Y  NG  +EA+ELF  M  +  E +S TL + LSA +SL+ L  GK+++   I
Sbjct: 398 WTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAI 457

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKDLILWTSMINANGLHGRGKVAI 548
           R       SV+++++ +YAR G++ +A +VF+ +   K+ + WTSMI A   HG G+ AI
Sbjct: 458 RSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAI 517

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
            LF +M      PD +T++ +  AC+H+G I++GK++ E M  ++ + P   HYAC+VDL
Sbjct: 518 VLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDL 577

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
           L RA  L EA++F++ M + P   VW +LL ACRV  N +L E+ A+KLL +DP N G Y
Sbjct: 578 LARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAY 637

Query: 669 VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
             ++NV++A  +W D  ++    +   +KK  G SW  + +K+H F A D  H + D I 
Sbjct: 638 SALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAIC 697

Query: 729 KKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRI 788
           KK AE+ E++ ++ G+V     VLH+V++E K ++L  HSE+LAIA+G++ + E + +RI
Sbjct: 698 KKAAEMWEEI-KKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRI 756

Query: 789 TKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            KNLRVC DCH+  K +S++  RE++VRDA RFHHF  G CSC DYW
Sbjct: 757 MKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 238/513 (46%), Gaps = 70/513 (13%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F  NSL++MYAK      AR +F +M E+ D V W  ++   + +G+  +A+  F +M  
Sbjct: 98  FTWNSLLSMYAKSGRLADARVVFAQMPER-DAVSWTVMVVGLNRAGRFWDAVKTFLDMVG 156

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC----- 208
            GL  + +     L +C  +    +G ++H+  +K G +  V VAN+++ MY +C     
Sbjct: 157 EGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAET 216

Query: 209 --------------------------GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
                                     G+M  A  +   +E +  VSWN+++ G+ QN L 
Sbjct: 217 ARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLD 276

Query: 243 CKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             A++FF R L  +  +PD+    + +SA   L  L  GK++H+Y ++ G     QI N 
Sbjct: 277 DMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNA 336

Query: 302 LMDMYAKCCCVNYMGR---------------------------------VFYQMTAQDFI 328
           L+  YAK   V    R                                 VF  M  +D I
Sbjct: 337 LISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVI 396

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           +WT +I GY QN  + +A+ELFR++   G + +   + +VL AC+ L  +   K+IH   
Sbjct: 397 AWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRA 456

Query: 389 IRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEA 446
           IR      V + NAI+ VY + G++  +R VF+ I   K+ V+WTSMI +   +GL  +A
Sbjct: 457 IRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQA 516

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVD 505
           + LF  M    V+ D +T +   SA +    + KGK      +   G   E S  + +VD
Sbjct: 517 IVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVD 576

Query: 506 MYARCGALDIANKVFNCVQT-KDLILWTSMINA 537
           + AR G L  A++    +    D ++W S++ A
Sbjct: 577 LLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 609



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 221/504 (43%), Gaps = 68/504 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + DA  +F ++ +R   +W  M+      G     ++T+  M   G++   F 
Sbjct: 106 MYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFM 165

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +CA  +    G K+H  V+K G  S   + NS++ MY KC D   AR +F+RM 
Sbjct: 166 LTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMK 225

Query: 121 ------------------------------EKEDVVLWNSIISAYSASGQCLEALGLF-R 149
                                         E+  +V WN+II+ Y+ +G    AL  F R
Sbjct: 226 VRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSR 285

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
            +    +  + +T  + L AC +     +G ++H+  +++G      + NALI+ YA+ G
Sbjct: 286 MLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSG 345

Query: 210 KMTEAAGVLYQ---------------------------------LENKDSVSWNSMLTGF 236
            +  A  ++ +                                 + N+D ++W +M+ G+
Sbjct: 346 SVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGY 405

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            QN    +AM+ FR +  +G +P+       +SA   L  L  GK++H  AI+      +
Sbjct: 406 EQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSV 465

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            + N ++ +YA+   V    RVF Q+   ++ ++WT++I   AQ+    +A+ LF  +  
Sbjct: 466 SVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLR 525

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNID 413
            G+  D +    V  AC+    + + K  +  ++ +   + ++     +VD+  + G + 
Sbjct: 526 VGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLT 585

Query: 414 YSRNVFESIE-SKDVVSWTSMISS 436
            +    + +  + D V W S++++
Sbjct: 586 EAHEFIQRMPVAPDTVVWGSLLAA 609


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/657 (36%), Positives = 379/657 (57%), Gaps = 3/657 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   ++ G +   Y+ N L+           A  V  Q  + +   +N+++ G V ND
Sbjct: 21  QCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSND 80

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIG 299
            +  A+  +  ++  G  PD       + A  RL +  + G  LH+  IK GF  D+ + 
Sbjct: 81  AFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVK 140

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+ +Y+K   +    +VF ++  ++ +SWT II GY ++ C  +AL LFR +   GL 
Sbjct: 141 TGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLR 200

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNV 418
            D   +  +L ACS +  ++  + I GY+   G + ++ +  ++VD+Y KCG+++ +R V
Sbjct: 201 PDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRV 260

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  KDVV W+++I  Y  NG+  EAL++F+ M   NV  D   +V   SA S L  L
Sbjct: 261 FDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGAL 320

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + G    G +    F     + ++L+D YA+CG++  A +VF  ++ KD +++ ++I+  
Sbjct: 321 ELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGL 380

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
            + G    A  +F +M      PD  TF+ LL  C+H+GL+++G ++   M   + + P 
Sbjct: 381 AMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPT 440

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY C+VDL  RA  L EA   +RSM +E  + VW ALLG CR+H + +L E V K+L+
Sbjct: 441 IEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLI 500

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           EL+P N G+YVL+SN+++AS +W + E++R  +   G++K PG SW+E+   +H F+  D
Sbjct: 501 ELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGD 560

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            SH  S +IY+KL  + + L RE GY   T+FVL +VEEEEK   L  HSE+LA+A+ ++
Sbjct: 561 TSHPLSHKIYEKLESLFKDL-REAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALI 619

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +    +IR+ KNLRVC DCH   KLVS++ GRE++VRD NRFHHF  G CSC DYW
Sbjct: 620 STGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 258/512 (50%), Gaps = 10/512 (1%)

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           LK L    + H L+L+ G     +++N L+         + A  +F +     ++ L+N+
Sbjct: 13  LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQT-PHPNIFLYNT 71

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED-SSFETLGMEIHAATVKS 189
           +I    ++    +A+ ++  M++ G   + +TF   L+AC     +  +G+ +H+  +K+
Sbjct: 72  LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G +  V+V   L+ +Y++ G +T+A  V  ++  K+ VSW +++ G++++  + +A+  F
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLF 191

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           R L   G +PD    V  + A  R+G+L +G+ +  Y  + G V ++ +  +L+DMYAKC
Sbjct: 192 RGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC 251

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             +    RVF  M  +D + W+ +I GYA N    +AL++F  +Q E +  D   +  V 
Sbjct: 252 GSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVF 311

Query: 370 MACSGLKCMSQTKEIHGYII-RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            ACS L  +       G +   + LS+ V+  A++D Y KCG++  ++ VF+ +  KD V
Sbjct: 312 SACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCV 371

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGF 487
            + ++IS     G    A  +F  M +  ++ D  T V  L   +   ++  G +  +G 
Sbjct: 372 VFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSG- 430

Query: 488 IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRG 544
            +   F++  ++     +VD+ AR G L  A  +   +  + + I+W +++    LH   
Sbjct: 431 -MSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDT 489

Query: 545 KVAIDLFYKM-EAESFAPDHITFLALLYACSH 575
           ++A  +  ++ E E +   H   L+ +Y+ SH
Sbjct: 490 QLAEHVLKQLIELEPWNSGHYVLLSNIYSASH 521



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 200/424 (47%), Gaps = 9/424 (2%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F +     +F +N ++   VSN      +  Y+ MR  G + D FTFP V+KAC  
Sbjct: 54  ATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTR 113

Query: 71  LKD-LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
           L      G  +H LV+K G+D   F+   LV +Y+K      AR++FD + EK +VV W 
Sbjct: 114 LPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEK-NVVSWT 172

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           +II  Y  SG   EALGLFR +  +GL  +++T V  L AC        G  I     +S
Sbjct: 173 AIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRES 232

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G    V+VA +L+ MYA+CG M EA  V   +  KD V W++++ G+  N +  +A+  F
Sbjct: 233 GSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVF 292

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            E+Q    +PD    V   SA  RLG L  G           F+S+  +G  L+D YAKC
Sbjct: 293 FEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKC 352

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             V     VF  M  +D + +  +I+G A       A  +F  +   G+  D      +L
Sbjct: 353 GSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLL 412

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
             C+    +       G+    G+S +  +   ++ YG C  +D        +E++D++ 
Sbjct: 413 CGCTHAGLVDD-----GHRYFSGMSSVFSVTPTIEHYG-C-MVDLQARAGLLVEAQDLIR 465

Query: 430 WTSM 433
              M
Sbjct: 466 SMPM 469



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 159/330 (48%), Gaps = 13/330 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G + DA ++FD++ ++ V +W A++  Y+ +G     L  +  +  +G+  D+FT
Sbjct: 146 LYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFT 205

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ AC+ + DL  G  I G + + G     F+  SLV MYAKC    +AR++FD M 
Sbjct: 206 LVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMV 265

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK DVV W+++I  Y+++G   EAL +F EMQR  +  + Y  V    AC  S    L +
Sbjct: 266 EK-DVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSAC--SRLGALEL 322

Query: 181 EIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
              A  +  G        +  ALI  YA+CG + +A  V   +  KD V +N++++G   
Sbjct: 323 GNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAM 382

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                 A   F ++   G +PD    V  +      G + +G   H Y    G  S   +
Sbjct: 383 CGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDG---HRYF--SGMSSVFSV 437

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
             T+ + Y   C V+   R    + AQD I
Sbjct: 438 TPTI-EHYG--CMVDLQARAGLLVEAQDLI 464


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/711 (36%), Positives = 401/711 (56%), Gaps = 46/711 (6%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK---MTEAAGVLYQLEN 223
           L++C+  SF+  G++IHA T+ +G + Q++  + LI+ ++  G    +  +  +  Q++ 
Sbjct: 16  LESCK--SFKQ-GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDC 72

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN-AVSASGRLGNLLNGKE 282
            +   WN+M+ G+ ++D   +A+  +  +   G  P    T    +++  RL +L  G E
Sbjct: 73  PNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHE 132

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           +H++ IK GF SDL + N L+ +Y+    +N    +F +   +D +S+ T+I GYA+ N 
Sbjct: 133 VHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQ 192

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI---IRKGLSDLVIL 399
              AL LF  +Q  G+  D     ++   CS L   +  K+IH  +   +R   S++++ 
Sbjct: 193 PESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLK 252

Query: 400 NAIVDVYGKCG--------------------------------NIDYSRNVFESIESKDV 427
           +AIVD+Y KCG                                 I+ +R +F  +  +DV
Sbjct: 253 SAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDV 312

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           +SWT+MIS Y   G  +EALELF  M    ++ D +TLV+ LSA + L     GK L   
Sbjct: 313 ISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQ 372

Query: 488 IIRKG-FNLEGSVASSLVDMYARCGALDIANKVFNCV--QTKDLILWTSMINANGLHGRG 544
            I  G FN    + ++++DMYA+CG++D A ++F  V    K   ++ SMI     HG G
Sbjct: 373 YIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLG 432

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC 604
           + AI +F ++ +    PD +TF+ +L AC HSGLI EGKK  E M   Y + P  EHY C
Sbjct: 433 ETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGC 492

Query: 605 LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGN 664
           +VDLLGR   LEEAY  V+ M  E  + +W ALL ACR H N ++GEI  +KLLE++  +
Sbjct: 493 MVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQH 552

Query: 665 PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSES 724
              YVL+SN+ A + +W++  QVR  M   G++K PG S+IE+G  IH F+A DKSH + 
Sbjct: 553 GARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQG 612

Query: 725 DEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGS 784
            EI   L ++  +L +  GYV  T  V+ +++EEEK  ++  HSE+LA+A+G++  +   
Sbjct: 613 KEIELMLKDMAMRL-KSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTD 671

Query: 785 LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            IRI KNLR+C DCH   KLVS ++GRE+ VRD  RFHHF  G CSC D+W
Sbjct: 672 TIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 229/467 (49%), Gaps = 48/467 (10%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFTFPCVIKACAMLK 72
           LF ++    +F WN M+  Y  +  P   +  Y  M   GI+  + FTFP ++ +CA L 
Sbjct: 66  LFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLS 125

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
            L+ G ++H  ++K G++S  F+ N+L+ +Y+   +   AR LFD      D+V +N++I
Sbjct: 126 SLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDE-SLVRDLVSYNTMI 184

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
             Y+   Q   AL LF EMQ  G++ + +TFVA    C   +   +G +IHA   K+ ++
Sbjct: 185 KGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRS 244

Query: 193 L--QVYVANALIAM--------------------------------YARCGKMTEAAGVL 218
           +   + + +A++ M                                YARCG++  A  + 
Sbjct: 245 IDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLF 304

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
             +  +D +SW +M++G+ Q     +A++ F+E++  G KPD+V  V  +SA  RLG   
Sbjct: 305 NHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFD 364

Query: 279 NGKELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--TAQDFISWTTIIA 335
            GK L+   I+ G F  +  +   +MDMYAKC  ++    +F ++    +    + ++IA
Sbjct: 365 LGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIA 424

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI-----HGYIIR 390
           G AQ+     A+ +FR +   GL  D +    VL AC     + + K++     + Y I+
Sbjct: 425 GLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIK 484

Query: 391 KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
             +        +VD+ G+ G ++ + ++ + +    + V W +++S+
Sbjct: 485 PQMEH---YGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSA 528



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/549 (26%), Positives = 258/549 (46%), Gaps = 65/549 (11%)

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD---FRKARQLFDRM 119
           C++++C   K    G +IH   +  G     F ++ L++ ++          +R LF ++
Sbjct: 14  CLLESCKSFKQ---GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQI 70

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETL 178
            +  ++ +WN++I  YS S    EA+ L+  M   G+   N +TF   L +C   S    
Sbjct: 71  -DCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEP 129

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G E+H+  +K G    ++V NALI +Y+  G +  A  +  +   +D VS+N+M+ G+ +
Sbjct: 130 GHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAE 189

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK--QGFVSDL 296
            +    A+  F E+Q +G  PD+   V   S    L     GK++HA   K  +   S++
Sbjct: 190 VNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNI 249

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFY--------------------------------QMTA 324
            + + ++DMYAKC  +N   RVF                                  M  
Sbjct: 250 LLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHE 309

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D ISWT +I+GY+Q     +ALELF+ ++  G+  D + + +VL AC+ L      K +
Sbjct: 310 RDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRL 369

Query: 385 HGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHN 440
           +   I  G+   + ++  A++D+Y KCG+ID +  +F  +    K    + SMI+    +
Sbjct: 370 YHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQH 429

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL-----NGFIIRKGFNL 495
           GL   A+ +F  +    ++ D +T V  L A     ++++GK+L     N + I+     
Sbjct: 430 GLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEH 489

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDL----ILWTSMINANGLHGR---GKVAI 548
            G     +VD+  R G L+   + ++ VQ        ++W ++++A   HG    G++A 
Sbjct: 490 YG----CMVDLLGRYGCLE---EAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAG 542

Query: 549 DLFYKMEAE 557
               +MEA+
Sbjct: 543 QKLLEMEAQ 551



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 168/359 (46%), Gaps = 56/359 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   G++  A  LFD+   R + ++N M+  Y    +P   L  +  M+  GI  D FT
Sbjct: 155 LYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFT 214

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKC--GYDSTDFIVNSLVAMYAK------------- 105
           F  +   C++L + + G +IH  V K     DS   + +++V MYAK             
Sbjct: 215 FVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFST 274

Query: 106 -------------------CYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALG 146
                              C +   AR+LF+ M E+ DV+ W ++IS YS +GQC EAL 
Sbjct: 275 MGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHER-DVISWTAMISGYSQAGQCSEALE 333

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAMY 205
           LF+EM+ +G+  +  T VA L AC       LG  ++   +++G  N    +  A++ MY
Sbjct: 334 LFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMY 393

Query: 206 ARCGKMTEAAGVLYQLEN--KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           A+CG +  A  +  ++    K    +NSM+ G  Q+ L   A+  FREL   G KPD+V 
Sbjct: 394 AKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVT 453

Query: 264 TVNAVSASGRLGNLLNGKEL-----HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
            V  + A G  G +  GK+L     +AY IK             M+ Y   C V+ +GR
Sbjct: 454 FVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQ-----------MEHYG--CMVDLLGR 499



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 118/238 (49%), Gaps = 4/238 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y +CG +  A +LF+ + +R V +W AM+  Y   G+    LE +  M  LGI  D  T 
Sbjct: 291 YARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTL 350

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             V+ ACA L   D G +++   ++ G ++    +  +++ MYAKC     A ++F R+G
Sbjct: 351 VAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVG 410

Query: 121 EKEDV-VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           +      ++NS+I+  +  G    A+ +FRE+   GL  +  TFV  L AC  S     G
Sbjct: 411 KNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEG 470

Query: 180 MEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
            ++  +   + G   Q+     ++ +  R G + EA  ++ ++    +SV W ++L+ 
Sbjct: 471 KKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSA 528



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 3/142 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQ--RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY KCGS+  A ++F +V +  +T F +N+M+     +G     +  +  +   G+  D 
Sbjct: 392 MYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDE 451

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            TF  V+ AC     ++ G K+   +    G          +V +  +     +A  L  
Sbjct: 452 VTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQ 511

Query: 118 RMGEKEDVVLWNSIISAYSASG 139
           +M  + + V+W +++SA    G
Sbjct: 512 KMPFEANSVIWRALLSACRTHG 533


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/699 (35%), Positives = 388/699 (55%), Gaps = 68/699 (9%)

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           M+A+ G++ +A GV  ++  +D+VSW  M+ G  +   + +A++   ++   G  P Q  
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC-------------- 309
             N +S+         G+++H++ +K G  S + + N++++MY KC              
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 310 -----------CCVNYMGR------VFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-R 351
                          ++GR      +F  M  +  +SW  +IAGY QN    KAL+LF R
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCG 410
            +    +  D   I SVL AC+ L  +   K++H YI+R  ++ +  + NA++  Y K G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 411 NIDYSRNV---------------------------------FESIESKDVVSWTSMISSY 437
           +++ +R +                                 F  + ++DVV+WT+MI  Y
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             NG  +EA++LF  M     E +S TL + LS  +SL+ L  GK+++   IR       
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 498 SVASSLVDMYARCGALDIANKVFNCV-QTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
           SV+++++ MYAR G+   A ++F+ V   K+ I WTSMI A   HG+G+ A+ LF +M  
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
               PD IT++ +L ACSH+G +NEGK++ + ++ ++Q+ P   HYAC+VDLL RA    
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EA +F+R M +EP A  W +LL ACRVH N EL E+ A+KLL +DP N G Y  I+NV++
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           A  +W D  ++    +   ++K  G SW  I +KIH F A D  H + D +Y   A + E
Sbjct: 541 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWE 600

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           ++ +  G+V   Q VLH+V++E K ++L  HSE+LAIA+G++ + E + +R+ KNLRVC 
Sbjct: 601 EI-KGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCN 659

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCH+  K +S++  RE++VRDA RFHHF  G+CSC DYW
Sbjct: 660 DCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/504 (23%), Positives = 216/504 (42%), Gaps = 68/504 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ K G + DA  +F ++ +R   +W  M+      G     ++T   M   G +   FT
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +CA+ +    G K+H  V+K G  S   + NS++ MY KC D   A  +F+RM 
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 121 EK------------------------------EDVVLWNSIISAYSASGQCLEALGLF-R 149
            +                                +V WN++I+ Y+ +G   +AL LF R
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
            +    +  + +T  + L AC +     +G ++HA  +++       V NALI+ YA+ G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 210 KMTEAAGVLYQ---------------------------------LENKDSVSWNSMLTGF 236
            +  A  ++ Q                                 + N+D V+W +M+ G+
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            QN    +A+  FR +   G +P+       +S    L  L  GK++H  AI+       
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            + N ++ MYA+     +  R+F Q+   ++ I+WT++I   AQ+    +A+ LF  +  
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNID 413
            G++ D +    VL ACS    +++ K  +  I  +     ++     +VD+  + G   
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480

Query: 414 YSRNVFESIE-SKDVVSWTSMISS 436
            ++     +    D ++W S++S+
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSA 504


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/804 (32%), Positives = 422/804 (52%), Gaps = 78/804 (9%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG- 155
           N ++  YAK      A +LFDRM  + DV  WN+++S Y  + + L+ L  F  M R G 
Sbjct: 75  NIMMNGYAKQGSLSDAEELFDRM-PRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGD 133

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
            + NA+TF   +++C       L  ++     K        V  AL+ M+ RCG +  A+
Sbjct: 134 SLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFAS 193

Query: 216 GVLYQLEN-------------------------------KDSVSWNSMLTGFVQNDLYCK 244
            +  Q+E                                +D VSWN M+    Q+    +
Sbjct: 194 RLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVRE 253

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+    E+   G + D     ++++A  RL +L  GK+LHA  I+     D  + + L++
Sbjct: 254 ALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIE 313

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +YAKC       RVF  +  ++ +SWT +I G  Q  C  K++ELF  ++ E +  D   
Sbjct: 314 LYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFA 373

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + +++  C     +   +++H   ++ G +  +V+ N+++ +Y KCG++  +  VF S+ 
Sbjct: 374 LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS 433

Query: 424 SKDVVSWTSMISSY-------------------------------VHNGLANEALELFY- 451
            +D+VSWTSMI++Y                               + +G   + L+++  
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSA 493

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           ++++ +V  D +T V+     + +   K G ++ G  ++ G  L  SVA++ + MY++CG
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCG 553

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            +  A K+F+ +  KD++ W +MI     HG GK A   F  M ++   PD+I+++A+L 
Sbjct: 554 RISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLS 613

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
            CSHSGL+ EGK + ++M   + + P  EH++C+VDLLGRA HL EA   +  M ++PTA
Sbjct: 614 GCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTA 673

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
           EVW ALL AC++H N EL E+ AK + ELD  + G+Y+L++ +++ + K  D  QVR  M
Sbjct: 674 EVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLM 733

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           R  G+KK PG SW+E+ NK+H F A D SH +   I  K+ E+ EK+    GYV      
Sbjct: 734 RDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHL-GYV------ 786

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
                  E  +    HSE+LA+A+G++       I I KNLR+C DCH+  KL+S +  R
Sbjct: 787 -----RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDR 841

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E V+RD  RFHHF++G CSCGDYW
Sbjct: 842 EFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 189/656 (28%), Positives = 324/656 (49%), Gaps = 69/656 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFT 60
           Y K GS+ DAE+LFD++ +R V +WN ++  Y      L  LET+  M   G S+ +AFT
Sbjct: 81  YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFT 140

Query: 61  FPCVIKACAMLK-------------------DLDCGAKIHGLVLKCGY------------ 89
           F CV+K+C  L                    D D    +  + ++CGY            
Sbjct: 141 FCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE 200

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
             T F  NS++A YAK Y    A + F+ M E+ DVV WN +I+A S SG+  EALGL  
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAER-DVVSWNMMIAALSQSGRVREALGLVV 259

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EM R G+  ++ T+ ++L AC        G ++HA  ++S   +  YVA+ALI +YA+CG
Sbjct: 260 EMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCG 319

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
              EA  V   L++++SVSW  ++ G +Q + + K+++ F +++      DQ      +S
Sbjct: 320 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 379

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
                 +L  G++LH+  +K G    + + N+L+ +YAKC  +     VF  M+ +D +S
Sbjct: 380 GCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 439

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQL---------------EGLDADVMIIGSVLMA--- 371
           WT++I  Y+Q    +KA E F  +                  G + D + + S +++   
Sbjct: 440 WTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 499

Query: 372 --------------CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
                         C+ +       +I G+ ++ GL  ++ + NA + +Y KCG I  ++
Sbjct: 500 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQ 559

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F+ +  KDVVSW +MI+ Y  +G+  +A + F  M     + D I+ V+ LS  S   
Sbjct: 560 KLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 619

Query: 477 ILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSM 534
           ++++GK     + R  G +      S +VD+  R G L  A  + + +  K    +W ++
Sbjct: 620 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 679

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           ++A  +HG  ++A +L  K   E  +PD  +++ L    S +G  ++  +  ++MR
Sbjct: 680 LSACKIHGNDELA-ELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMR 734



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 176/360 (48%), Gaps = 41/360 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCGS  +A+++F+ +  R   +W  ++G  +      + +E +++MR   +++D F 
Sbjct: 314 LYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFA 373

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I  C    DL  G ++H L LK G++    + NSL+++YAKC D + A  +F  M 
Sbjct: 374 LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS 433

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-----NAY-------------- 161
           E+ D+V W S+I+AYS  G  ++A   F  M     +T      AY              
Sbjct: 434 ER-DIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYS 492

Query: 162 -------------TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
                        T+V   + C D     LG +I   TVK+G  L V VANA I MY++C
Sbjct: 493 AMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKC 552

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G+++EA  +   L  KD VSWN+M+TG+ Q+ +  +A + F ++   G KPD +  V  +
Sbjct: 553 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           S     G +  GK    Y      V  +  G   ++ ++  C V+ +GR  +   A+D I
Sbjct: 613 SGCSHSGLVQEGK---LYFDMMTRVHGISPG---LEHFS--CMVDLLGRAGHLTEAKDLI 664



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 227/508 (44%), Gaps = 79/508 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYV-------------------------- 34
           M+ +CG V  A +LF ++ + T+F  N+ML  Y                           
Sbjct: 182 MFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMM 241

Query: 35  -----SNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                 +G     L     M   G+ +D+ T+   + ACA L  L  G ++H  V++   
Sbjct: 242 IAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP 301

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCL-EALGLF 148
               ++ ++L+ +YAKC  F++A+++F+ + ++  V  W  +I   S   +C  +++ LF
Sbjct: 302 QIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS-WTVLIGG-SLQYECFSKSVELF 359

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            +M+   +  + +     +  C +     LG ++H+  +KSG N  + V+N+LI++YA+C
Sbjct: 360 NQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKC 419

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL---------------- 252
           G +  A  V   +  +D VSW SM+T + Q     KA +FF  +                
Sbjct: 420 GDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYI 479

Query: 253 -QGA------------GQK---PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             GA             QK   PD V  V        +G    G ++  + +K G + ++
Sbjct: 480 QHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNV 539

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N  + MY+KC  ++   ++F  +  +D +SW  +I GY+Q+    +A + F  +  +
Sbjct: 540 SVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSK 599

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTK-------EIHGYIIRKGLSDLVILNAIVDVYGKC 409
           G   D +   +VL  CS    + + K        +HG  I  GL      + +VD+ G+ 
Sbjct: 600 GAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHG--ISPGLEH---FSCMVDLLGRA 654

Query: 410 GNIDYSRNVFESIESKDVVS-WTSMISS 436
           G++  ++++ + +  K     W +++S+
Sbjct: 655 GHLTEAKDLIDKMPMKPTAEVWGALLSA 682



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 198/437 (45%), Gaps = 37/437 (8%)

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V   N ++  YA+ G +++A  +  ++  +D  SWN++++G+ Q   +   ++ F  + 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 254 GAGQK-PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
            +G   P+       + + G LG      +L     K  F  D  +   L+DM+ +C  V
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189

Query: 313 NYMGRVFYQ-------------------------------MTAQDFISWTTIIAGYAQNN 341
           ++  R+F Q                               M  +D +SW  +IA  +Q+ 
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILN 400
              +AL L   +  +G+  D     S L AC+ L  +   K++H  +IR     D  + +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           A++++Y KCG+   ++ VF S++ ++ VSWT +I   +     ++++ELF  M    +  
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D   L + +S   +   L  G++L+   ++ G N    V++SL+ +YA+CG L  A  VF
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF 429

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
           + +  +D++ WTSMI A    G    A + F  M       + IT+ A+L A    G   
Sbjct: 430 SSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEE 485

Query: 581 EGKKFLEIMRCDYQLDP 597
           +G K    M     + P
Sbjct: 486 DGLKMYSAMLSQKDVTP 502



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 143/317 (45%), Gaps = 38/317 (11%)

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
           GL + V +  ++L A      +S  + +    I++   +++  N +++ Y K G++  + 
Sbjct: 34  GLASAVFLQNTLLHAYLSCGALSDARRLLRADIKE--PNVITHNIMMNGYAKQGSLSDAE 91

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA-NVESDSITLVSALSAASSL 475
            +F+ +  +DV SW +++S Y       + LE F  M+ + +   ++ T    + +  +L
Sbjct: 92  ELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGAL 151

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ----------- 524
              +   +L G   +  F  +  V ++LVDM+ RCG +D A+++F+ ++           
Sbjct: 152 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 211

Query: 525 --------------------TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
                                +D++ W  MI A    GR + A+ L  +M  +    D  
Sbjct: 212 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 271

Query: 565 TFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
           T+ + L AC+    +  GK+   +++R   Q+DP+    + L++L  +    +EA +   
Sbjct: 272 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA--SALIELYAKCGSFKEAKRVFN 329

Query: 624 SMQIEPTAEVWCALLGA 640
           S+Q +  +  W  L+G 
Sbjct: 330 SLQ-DRNSVSWTVLIGG 345


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/740 (33%), Positives = 414/740 (55%), Gaps = 5/740 (0%)

Query: 6    GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
            G +  A  L  K+   +   WNA++  +  +G    VL  Y  MR  G+     TF  ++
Sbjct: 283  GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASML 342

Query: 66   KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
             A A +K    G ++H   +  G D+  F+ +SL+ +YAKC     A+ +FD   EK ++
Sbjct: 343  SAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEK-NI 401

Query: 126  VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
            V+WN++++ +  +    EA+ +F+ M R  L T+ +TFV+ L AC   S   LG ++H  
Sbjct: 402  VMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCV 461

Query: 186  TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
            T+K+  ++ ++VANA + MY++ G + +A  +   +  KDS+SWN++  G  QN    +A
Sbjct: 462  TIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEA 521

Query: 246  MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
            +   + ++  G  PD V    A++A   +     GK++H  AIK G  S+  +G++L+D+
Sbjct: 522  VCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDL 581

Query: 306  YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
            Y+K   V    ++F Q+ A   +    +IAG+ QNN   +A++LF+ V  +GL    +  
Sbjct: 582  YSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTF 641

Query: 366  GSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNI-DYSRNVFESI 422
             S+L  CSG    +  K++H Y ++ G+   D ++  ++  +Y K   + D ++ + E  
Sbjct: 642  SSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMP 701

Query: 423  ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
            + K++  WT++IS Y  NG  + +L  F+ M   NV SD  T  S L A S ++    GK
Sbjct: 702  DHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGK 761

Query: 483  ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLH 541
            E++G I + GF    +  S+L+DMY++CG +  + + F  ++ K D++ W SMI     +
Sbjct: 762  EIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKN 821

Query: 542  GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
            G    A+ LF KME     PD +TFL +L AC+HSGLI+EG+ F   MR  Y L P  +H
Sbjct: 822  GYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDH 881

Query: 602  YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
            YAC +DLLGR  HL+EA + +  +   P   VW   L ACR+H ++E G+I A+KL+EL+
Sbjct: 882  YACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELE 941

Query: 662  PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
            P     YVL+S++ AA+  W + +  R  MR  G+ K PG SWI +GNK   F+ +DK H
Sbjct: 942  PQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYH 1001

Query: 722  SESDEIYKKLAEITEKLERE 741
             ++  IY+ L ++T  ++++
Sbjct: 1002 PDNLRIYEMLGDLTGMMKKD 1021



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 288/568 (50%), Gaps = 14/568 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG   DA+ +FD   ++ +  WNAML  +V N  P   +  +  M    +  D FT
Sbjct: 379 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFT 438

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ AC  L     G ++H + +K   D + F+ N+ + MY+K      A+ LF  + 
Sbjct: 439 FVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP 498

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D + WN++    + + +  EA+ + + M+  G+  +  +F  A+ AC +      G 
Sbjct: 499 YK-DSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 557

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K G      V ++LI +Y++ G +  +  +  Q++    V  N+++ GFVQN+
Sbjct: 558 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 617

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSA-SGRLGNLLNGKELHAYAIKQGFV-SDLQI 298
              +A+Q F+++   G KP  V   + +S  SG L + + GK++H Y +K G +  D  +
Sbjct: 618 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAI-GKQVHCYTLKSGVLYDDTLL 676

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           G +L  +Y K   +    ++  +M   ++   WT II+GYAQN     +L  F  ++   
Sbjct: 677 GVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCN 736

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSR 416
           + +D     SVL ACS +   +  KEIHG I + G        +A++D+Y KCG++  S 
Sbjct: 737 VRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSF 796

Query: 417 NVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             F+ +++K D++ W SMI  +  NG A+EAL LF  M E  ++ D +T +  L A +  
Sbjct: 797 EAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHS 856

Query: 476 SILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWT 532
            ++ +G+   G  +RK + L   +   +  +D+  R G L  A +  + +  + D ++W 
Sbjct: 857 GLISEGRHFFG-SMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWA 915

Query: 533 SMINANGLHG---RGKVAIDLFYKMEAE 557
           + + A  +H    RGK+A     ++E +
Sbjct: 916 TYLAACRMHKDEERGKIAARKLVELEPQ 943



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 275/578 (47%), Gaps = 38/578 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
           +Y K G V  A        +R     +++L  +  +G P  VL  +  +R   G   D F
Sbjct: 110 LYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQF 169

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
               V+ AC+ +  L  G ++H  V+K G+ S+ F   +LV MYAKC D   AR++FD +
Sbjct: 170 GLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGI 229

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               D + W+S+I+ Y   G   EAL LF  M ++G   +  T V               
Sbjct: 230 A-CPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLV--------------- 273

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                                +I+  A  G++  A  +L ++    +V+WN++++G  Q+
Sbjct: 274 --------------------TIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQS 313

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L    +  +++++  G  P +    + +SA+  +   + G+++HA A+  G  +++ +G
Sbjct: 314 GLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVG 373

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           ++L+++YAKC C +    VF     ++ + W  ++ G+ QN    +A+ +F+ +    L 
Sbjct: 374 SSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQ 433

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            D     S+L AC+ L      K++H   I+  +   L + NA +D+Y K G I  ++ +
Sbjct: 434 TDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKAL 493

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  I  KD +SW ++      N    EA+ +   M    +  D ++  +A++A S++   
Sbjct: 494 FSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRAT 553

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + GK+++   I+ G     +V SSL+D+Y++ G ++ + K+F  V    ++   ++I   
Sbjct: 554 ETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 613

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             +     AI LF ++  +   P  +TF ++L  CS S
Sbjct: 614 VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGS 651



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 239/510 (46%), Gaps = 44/510 (8%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +HG +L+ G      + +SLV +Y K      A       GE+      +S++S ++ SG
Sbjct: 88  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAA-SSLLSCHARSG 146

Query: 140 QCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
              + LG FR ++   G   + +     L AC        G ++H   VKSG +  V+  
Sbjct: 147 SPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCE 206

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
            AL+ MYA+CG +  A  V   +   D++ W+SM+  + +   Y +A+  F  +   G  
Sbjct: 207 AALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSA 266

Query: 259 PDQVCTVNAVS---ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           PDQV  V  +S   +SGRL         HA A+ +                         
Sbjct: 267 PDQVTLVTIISTLASSGRLD--------HATALLK------------------------- 293

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
                +M     ++W  +I+G+AQ+      L L++ ++  GL        S+L A + +
Sbjct: 294 -----KMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANM 348

Query: 376 KCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           K   + +++H   +  GL +++ + ++++++Y KCG    ++NVF+    K++V W +M+
Sbjct: 349 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 408

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           + +V N L  EA+ +F  M    +++D  T VS L A + LS    GK+++   I+   +
Sbjct: 409 TGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMD 468

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
           +   VA++ +DMY++ GA+  A  +F+ +  KD I W ++      +   + A+ +  +M
Sbjct: 469 ISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRM 528

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKK 584
                 PD ++F   + ACS+      GK+
Sbjct: 529 RLHGITPDDVSFSTAINACSNIRATETGKQ 558



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 15/270 (5%)

Query: 379 SQT-KEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           SQT + +HG I+R G   L  L +++V++Y K G + Y+ +       +   + +S++S 
Sbjct: 82  SQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSC 141

Query: 437 YVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
           +  +G   + L  F Y+   A    D   L   LSA S + +L  G++++  +++ GF+ 
Sbjct: 142 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSS 201

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
                ++LVDMYA+CG +  A +VF+ +   D I W+SMI      G  + A+ LF +M+
Sbjct: 202 SVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 261

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
               APD +T + ++   + SG ++     L+ M       P P   A    + G A   
Sbjct: 262 KMGSAPDQVTLVTIISTLASSGRLDHATALLKKM-------PTPSTVAWNAVISGHAQSG 314

Query: 616 EE-----AYQFVRSMQIEPTAEVWCALLGA 640
            E      Y+ +RS  + PT   + ++L A
Sbjct: 315 LEFNVLGLYKDMRSWGLWPTRSTFASMLSA 344


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/731 (34%), Positives = 428/731 (58%), Gaps = 13/731 (1%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A QLFD M  K D  +WN +I  +++ G   EAL L+  M   G+  +++T+   +++  
Sbjct: 79  ALQLFDEMN-KADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKSVT 137

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
             S    G +IHA  +K      VYV N+LI++Y + G   +A  V  ++  +D VSWNS
Sbjct: 138 GISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNS 197

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M++G++  +   +++  F+E+   G KPD+  T++A+ A   + +   GKELH +A++  
Sbjct: 198 MISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSR 257

Query: 292 F-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
               D+ +  +++DMY+K   V+Y  R+F  +  ++ ++W  +I  YA+N+    A   F
Sbjct: 258 IETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCF 317

Query: 351 RTV-QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGK 408
           + + +  GL  DV+ + ++L AC+ L    + + IHGY +R+G L  +V+  A++D+YG+
Sbjct: 318 QKMSEQNGLQPDVITLINLLPACAIL----EGRTIHGYAMRRGFLPHIVLDTALIDMYGE 373

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
            G +  +  +F+ I  K+++SW S+I++YV NG    ALELF  + ++++  DS T+ S 
Sbjct: 374 WGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASI 433

Query: 469 LSA-ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
           L A A SLS L +G++++ +I++  +     + +SLV MYA CG L+ A K FN V  KD
Sbjct: 434 LPAYAESLS-LSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKD 492

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           ++ W S+I A  +HG G++++ LF +M A    P+  TF +LL ACS SG+++EG ++ E
Sbjct: 493 VVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFE 552

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
            M+ +Y +DP  EHY  ++DL+GR  +   A +F+R M   PTA +W +LL A R H++ 
Sbjct: 553 SMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDI 612

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
            + E  A+++ +++  N G YVL+ N++A +R+W+DV ++++ M   G+ +T   S +E 
Sbjct: 613 TVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEA 672

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAEITEKL---EREGGYVAQTQFVLHNVEEEEKVQML 764
            +K H     D+SH E+++IY+ L  ++  +   E E  YV     +      + +    
Sbjct: 673 KSKTHVLTNGDRSHVETNKIYEVLDIVSRMIGEEEEEDSYVHYVSKLRRETLAKSRSNSP 732

Query: 765 YGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHF 824
             HS RLA  +G++ +  G  + +  N R+C  CH F +  S++  RE+VV D+  FHHF
Sbjct: 733 RRHSVRLATCFGLISTETGRTVTVRNNTRICRKCHEFLEKASKMTRREIVVGDSKIFHHF 792

Query: 825 EAGVCSCGDYW 835
             G CSCG+YW
Sbjct: 793 SNGRCSCGNYW 803



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 166/565 (29%), Positives = 300/565 (53%), Gaps = 13/565 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           +   G + DA QLFD++++   F WN M+  + S G     L+ Y RM   G+  D+FT+
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P VIK+   +  L+ G KIH +V+K  + S  ++ NSL+++Y K      A ++F+ M E
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D+V WNS+IS Y A      +L LF+EM + G   + ++ ++AL AC       +G E
Sbjct: 190 R-DIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKE 248

Query: 182 IHAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +H   V+S  +   V V  +++ MY++ G+++ A  +   +  ++ V+WN ++  + +N 
Sbjct: 249 LHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNS 308

Query: 241 LYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               A   F+++ +  G +PD +  +N + A      +L G+ +H YA+++GF+  + + 
Sbjct: 309 RVTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRRGFLPHIVLD 364

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+DMY +   +     +F ++  ++ ISW +IIA Y QN  +  ALELF+ +    L 
Sbjct: 365 TALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLL 424

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D   I S+L A +    +S+ ++IH YI++    S+ +ILN++V +Y  CG+++ +R  
Sbjct: 425 PDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKC 484

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  +  KDVVSW S+I +Y  +G    ++ LF  M  + V+ +  T  S L+A S   ++
Sbjct: 485 FNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMV 544

Query: 479 KKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
            +G E    + R+ G +        ++D+  R G    A +    +       +W S++N
Sbjct: 545 DEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLN 604

Query: 537 ANGLHGR---GKVAIDLFYKMEAES 558
           A+  H      + A +  +KME ++
Sbjct: 605 ASRNHNDITVAEFAAEQIFKMEHDN 629



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 207/383 (54%), Gaps = 7/383 (1%)

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           +A  G M +A  +  ++   D+  WN M+ GF    LY +A+Q +  +  +G K D    
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
              + +   + +L  GK++HA  IK  FVSD+ + N+L+ +Y K  C     +VF +M  
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D +SW ++I+GY       ++L LF+ +   G   D     S L ACS +   +  KE+
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249

Query: 385 HGYIIRKGLS--DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           H + +R  +   D++++ +I+D+Y K G + Y+  +F+ I  +++V+W  +I  Y  N  
Sbjct: 250 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSR 309

Query: 443 ANEALELFYLMNEAN-VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
             +A   F  M+E N ++ D ITL++ L A + L    +G+ ++G+ +R+GF     + +
Sbjct: 310 VTDAFLCFQKMSEQNGLQPDVITLINLLPACAIL----EGRTIHGYAMRRGFLPHIVLDT 365

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           +L+DMY   G L  A  +F+ +  K+LI W S+I A   +G+   A++LF K+   S  P
Sbjct: 366 ALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLP 425

Query: 562 DHITFLALLYACSHSGLINEGKK 584
           D  T  ++L A + S  ++EG++
Sbjct: 426 DSTTIASILPAYAESLSLSEGRQ 448



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 227/471 (48%), Gaps = 23/471 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G   DAE++F+++ +R + +WN+M+  Y++  +  R L  +  M   G   D F+
Sbjct: 170 LYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFS 229

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRM 119
               + AC+ +   + G ++H   ++   ++ D +V  S++ MY+K  +   A ++F  +
Sbjct: 230 TMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCI 289

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETL 178
            ++ ++V WN +I  Y+ + +  +A   F++M ++ GL  +  T +  L AC  +  E  
Sbjct: 290 IQR-NIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPAC--AILE-- 344

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  IH   ++ G    + +  ALI MY   G++  A  +  ++  K+ +SWNS++  +VQ
Sbjct: 345 GRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQ 404

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N     A++ F++L  +   PD     + + A     +L  G+++HAY +K  + S+  I
Sbjct: 405 NGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTII 464

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N+L+ MYA C  +    + F  +  +D +SW +II  YA +     ++ LF  +    +
Sbjct: 465 LNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKV 524

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
           D +     S+L ACS       G +     K  +G  I  G+        ++D+ G+ GN
Sbjct: 525 DPNKSTFASLLAACSISGMVDEGWEYFESMKREYG--IDPGIEH---YGYMLDLIGRTGN 579

Query: 412 IDYSRNVFESIESKDVVS-WTSMI-SSYVHNGL--ANEALELFYLMNEANV 458
              ++     +        W S++ +S  HN +  A  A E  + M   N 
Sbjct: 580 FSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNT 630


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/772 (33%), Positives = 436/772 (56%), Gaps = 15/772 (1%)

Query: 73  DLDCG-AKIHGLVLKCGYDST----DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVL 127
           + D G +K   LVL+  Y  T    D  +   +  +A       A QLFD M  K D  L
Sbjct: 39  EFDSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMN-KADAFL 97

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           WN +I  +++ G  +EA+  +  M   G+  + +T+   +++    S    G +IHA  +
Sbjct: 98  WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
           K G    VYV N+LI++Y + G   +A  V  ++  +D VSWNSM++G++       ++ 
Sbjct: 158 KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLM 217

Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIGNTLMDMY 306
            F+E+   G KPD+  T++A+ A   + +   GKE+H +A++      D+ +  +++DMY
Sbjct: 218 LFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMY 277

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV-QLEGLDADVMII 365
           +K   V+Y  R+F  M  ++ ++W  +I  YA+N     A   F+ + +  GL  DV+  
Sbjct: 278 SKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITS 337

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIES 424
            ++L A + L    + + IHGY +R+G L  +V+  A++D+YG+CG +  +  +F+ +  
Sbjct: 338 INLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE 393

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILKKGKE 483
           K+V+SW S+I++YV NG    ALELF  + ++++  DS T+ S L A A SLS L +G+E
Sbjct: 394 KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLS-LSEGRE 452

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++ +I++  +     + +SLV MYA CG L+ A K FN +  KD++ W S+I A  +HG 
Sbjct: 453 IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGF 512

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
           G++++ LF +M A    P+  TF +LL ACS SG+++EG ++ E M+ +Y +DP  EHY 
Sbjct: 513 GRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYG 572

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C++DL+GR  +   A +F+  M   PTA +W +LL A R H +  + E  A+++ +++  
Sbjct: 573 CMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHD 632

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           N G YVL+ N++A + +W+DV ++++ M   G+ +T   S +E   K H F   D+SH  
Sbjct: 633 NTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVA 692

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
           +++IY+ L  ++  +  E  YV     +      + +      HS RLA  +G++ +  G
Sbjct: 693 TNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETG 752

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             + +  N R+C  CH F +  SRL  RE+VV D+  FHHF  G CSCG+YW
Sbjct: 753 RRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 175/557 (31%), Positives = 304/557 (54%), Gaps = 13/557 (2%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           DA QLFD++++   F WN M+  + S G  +  ++ YSRM   G+  D FT+P VIK+ A
Sbjct: 82  DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
            +  L+ G KIH +V+K G+ S  ++ NSL+++Y K      A ++F+ M E+ D+V WN
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER-DIVSWN 200

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           S+IS Y A G    +L LF+EM + G   + ++ ++AL AC       +G EIH   V+S
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260

Query: 190 G-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
             +   V V  +++ MY++ G+++ A  +   +  ++ V+WN M+  + +N     A   
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320

Query: 249 FREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
           F+++ +  G +PD + ++N + AS     +L G+ +H YA+++GF+  + +   L+DMY 
Sbjct: 321 FQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYG 376

Query: 308 KCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
           +C  +     +F +M  ++ ISW +IIA Y QN  +  ALELF+ +    L  D   I S
Sbjct: 377 ECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436

Query: 368 VLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           +L A +    +S+ +EIH YI++ +  S+ +ILN++V +Y  CG+++ +R  F  I  KD
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKD 496

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
           VVSW S+I +Y  +G    ++ LF  M  + V  +  T  S L+A S   ++ +G E   
Sbjct: 497 VVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFE 556

Query: 487 FIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR- 543
            + R+ G +        ++D+  R G    A +    +       +W S++NA+  H   
Sbjct: 557 SMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDI 616

Query: 544 --GKVAIDLFYKMEAES 558
              + A +  +KME ++
Sbjct: 617 TIAEFAAEQIFKMEHDN 633



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 213/431 (49%), Gaps = 19/431 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G   DAE++F+++ +R + +WN+M+  Y++ G+    L  +  M   G   D F+
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRM 119
               + AC+ +     G +IH   ++   ++ D +V  S++ MY+K  +   A ++F+ M
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETL 178
            ++ ++V WN +I  Y+ +G+  +A   F++M ++ GL  +  T +  L A    S    
Sbjct: 294 IQR-NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILE 348

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  IH   ++ G    + +  ALI MY  CG++  A  +  ++  K+ +SWNS++  +VQ
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N     A++ F+EL  +   PD     + + A     +L  G+E+HAY +K  + S+  I
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N+L+ MYA C  +    + F  +  +D +SW +II  YA +     ++ LF  +    +
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
           + +     S+L ACS       G +     K  +G  I  G+        ++D+ G+ GN
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYG--IDPGIEH---YGCMLDLIGRTGN 583

Query: 412 IDYSRNVFESI 422
              ++   E +
Sbjct: 584 FSAAKRFLEEM 594



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYG+CG +  AE +FD+++++ V +WN+++ AYV NG+    LE +  +    +  D+ T
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A A    L  G +IH  ++K  Y S   I+NSLV MYA C D   AR+ F+ + 
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K DVV WNSII AY+  G    ++ LF EM    +  N  TF + L AC  S     G 
Sbjct: 494 LK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGW 552

Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
           E   +  +  G +  +     ++ +  R G  + A   L ++    +   W S+L  
Sbjct: 553 EYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNA 609


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 237/657 (36%), Positives = 388/657 (59%), Gaps = 8/657 (1%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H  +V +G     +VA+AL  +Y +  +  +A  V   + + D++ WN++L G   ++ 
Sbjct: 136 LHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSE- 194

Query: 242 YCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              A++ F  +  AG+ +PD     +++ A+    ++  G+ +H Y +K G      +  
Sbjct: 195 ---ALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVT 251

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LM +Y+KC  ++    +F +M   D +++  +I+GY+ N     ++ELF+ +   G   
Sbjct: 252 GLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRP 311

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           +   + +V+   S        + +H ++++  L +D ++  A+  +Y +  +++ +R++F
Sbjct: 312 NSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIF 371

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           +++  K + SW +MIS Y  NGL   A+ LF LM E NV+ + IT+ S LSA + L  L 
Sbjct: 372 DAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALS 431

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GK ++  I ++   L   V ++L+DMYA+CG++  A  +F+ +  K+++ W +MI+  G
Sbjct: 432 LGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYG 491

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           LHG+G  A+ L+  M      P   TFL+++YACSH GL++EG+K   +M  +Y++ P  
Sbjct: 492 LHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGI 551

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSM-QIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
           EH  C+VDLLGRA  L EA + +    Q      VW ALLGAC VH N +L ++ ++KL 
Sbjct: 552 EHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLF 611

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           ELD  N G YVL+SN++ + + + +   VR   +   L KTPG + IEIG++ H F+A D
Sbjct: 612 ELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGD 671

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
             H +S+ IY  L  +T K+  E GY   T+  L++VEEEEK  M+  HSE+LAIA+G+L
Sbjct: 672 HLHPQSEAIYSYLERLTAKM-IEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLL 730

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +  G+ IRI KNLRVC+DCH+  K +S++  R +VVRDA+RFHHF  GVCSCGDYW
Sbjct: 731 STEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 274/536 (51%), Gaps = 27/536 (5%)

Query: 40  LRVLETYSRMRVLGISVDAFTFPCVIKACAML-----KDLDCGAKIHGLVLKCGYDSTDF 94
           LR L +  R  +L  S D+F+F     + +        D      +HGL +  GY +  F
Sbjct: 92  LRSLPSL-RPHLLFPSPDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTF 150

Query: 95  IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV 154
           + ++L  +Y K      AR++FD +    D +LWN++++    S    EAL  F  M   
Sbjct: 151 VASALAKLYFKLSRGDDARKVFDTV-PSPDTILWNTLLAGLPGS----EALEAFVRMVDA 205

Query: 155 GLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
           G V  ++ T  ++L+A  ++S   +G  +H   VK G     +V   L+++Y++CG M  
Sbjct: 206 GRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDS 265

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +  +++N D V++N++++G+  N +   +++ F+EL  +G +P+    V  +     
Sbjct: 266 AQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSP 325

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
            G+ L  + LHA+ +K    +D  +   L  +Y +   +     +F  M  +   SW  +
Sbjct: 326 FGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAM 385

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           I+GYAQN     A+ LF+ +Q   +  + + I S L AC+ L  +S  K +H  I ++ L
Sbjct: 386 ISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKL 445

Query: 394 S-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
             ++ ++ A++D+Y KCG+I  +R++F+ +++K+VVSW +MIS Y  +G   EAL+L+  
Sbjct: 446 ELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKD 505

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKEL-----NGFIIRKGFNLEGSVASSLVDMY 507
           M +A +   S T +S + A S   ++ +G+++     N + I  G        + +VD+ 
Sbjct: 506 MLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEH----CTCMVDLL 561

Query: 508 ARCGALDIANKVFNCVQTKDL--ILWTSMINANGLHGR---GKVAIDLFYKMEAES 558
            R G L+ A ++ +      +   +W +++ A  +H      K+A    +++++E+
Sbjct: 562 GRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSEN 617



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 206/423 (48%), Gaps = 22/423 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           +Y K     DA ++FD V       WN +L     +      LE + RM   G +  D+ 
Sbjct: 158 LYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGS----EALEAFVRMVDAGRVRPDST 213

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T    ++A A    +  G  +HG  +KCG    + +V  L+++Y+KC D   A+ LFDRM
Sbjct: 214 TLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRM 273

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +  D+V +N++IS YS +G    ++ LF+E+   G   N+ T VA +        E L 
Sbjct: 274 -DNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLA 332

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +HA  VK+  +    V+ AL  +Y R   M  A  +   +  K   SWN+M++G+ QN
Sbjct: 333 RCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQN 392

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L   A+  F+ +Q    +P+ +   + +SA   LG L  GK +H    K+    ++ + 
Sbjct: 393 GLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVM 452

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+DMYAKC  +     +F +M  ++ +SW  +I+GY  +    +AL+L++ +    LD
Sbjct: 453 TALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDM----LD 508

Query: 360 ADVMIIG----SVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAIVDVYGKCG 410
           A ++       SV+ ACS    + + +++     + Y I  G+     +   VD+ G+ G
Sbjct: 509 ARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCM---VDLLGRAG 565

Query: 411 NID 413
            ++
Sbjct: 566 KLN 568



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 162/306 (52%), Gaps = 6/306 (1%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
            + LH  ++  G+ +D  + + L  +Y K    +   +VF  + + D I W T++AG   
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192

Query: 340 NNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV- 397
           +    +ALE F R V    +  D   + S L A +    M+  + +HGY ++ GL++   
Sbjct: 193 S----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           ++  ++ +Y KCG++D ++ +F+ +++ D+V++ ++IS Y  NG+   ++ELF  +  + 
Sbjct: 249 VVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASG 308

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
              +S TLV+ +   S        + L+ F+++   + +  V+++L  +Y R   ++ A 
Sbjct: 309 WRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESAR 368

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            +F+ +  K +  W +MI+    +G  ++A+ LF  M+  +  P+ IT  + L AC+H G
Sbjct: 369 SIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLG 428

Query: 578 LINEGK 583
            ++ GK
Sbjct: 429 ALSLGK 434


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/763 (34%), Positives = 423/763 (55%), Gaps = 5/763 (0%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHG-LVLKCGYDSTD-FIVNSLVAMYAKCYDFRKAR 113
           VD+F     ++ C    D   G  +HG +V + G    D F  N L+ MY K      AR
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           +LFDRM E+ ++V + +++ A++  G    A  LFR ++  G   N +     L+     
Sbjct: 117 RLFDRMPER-NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
               L   +H+   K G +   +V + LI  Y+ C  +++A  V   +  KD+V W +M+
Sbjct: 176 DAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           + + +ND    A + F +++ +G KP+     + + A+  L +++ GK +H  AIK    
Sbjct: 236 SCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLND 295

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           ++  +G  L+DMYAKC  +      F  +   D I  + +I+ YAQ+N + +A ELF  +
Sbjct: 296 TEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRL 355

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
               +  +   + SVL AC+ +  +   K+IH + I+ G  SDL + NA++D Y KC ++
Sbjct: 356 MRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM 415

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D S  +F S+   + VSW +++  +  +GL  EAL +F  M  A +    +T  S L A 
Sbjct: 416 DSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           +S + ++   +++  I +  FN +  + +SL+D YA+CG +  A KVF  +  +D+I W 
Sbjct: 476 ASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWN 535

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           ++I+   LHG+   A++LF +M   +   + ITF+ALL  CS +GL+N G    + MR D
Sbjct: 536 AIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRID 595

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
           + + P  EHY C+V LLGRA  L +A QF+  +   P+A VW ALL +C +H N  LG  
Sbjct: 596 HGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRF 655

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
            A+K+LE++P +   YVL+SN++AA+     V  +R  MR  G++K PG SW+EI  +IH
Sbjct: 656 SAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIH 715

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLA 772
           +F      H +   I   L  +  K  RE GY+     VLH+V++E+K +ML+ HSERLA
Sbjct: 716 AFSVGSVDHPDMRVINAMLEWLNLKTSRE-GYIPDINVVLHDVDKEQKTRMLWVHSERLA 774

Query: 773 IAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           +AYG++ +  G  IRI KNLR C+DCH+   ++S++  RE++V
Sbjct: 775 LAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 162/582 (27%), Positives = 291/582 (50%), Gaps = 9/582 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGK G +  A +LFD++ +R + ++  ++ A+   G+       + R+R  G  V+ F 
Sbjct: 105 MYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFV 164

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++K    +        +H    K G+D   F+ + L+  Y+ C     A  +F+ + 
Sbjct: 165 LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIV 224

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V+W +++S YS +     A  +F +M+  G   N +   + L+A        LG 
Sbjct: 225 RK-DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGK 283

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +K+  + + +V  AL+ MYA+CG + +A      +   D +  + M++ + Q++
Sbjct: 284 GIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSN 343

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A + F  L  +   P++    + + A   +  L  GK++H +AIK G  SDL +GN
Sbjct: 344 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 403

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            LMD YAKC  ++   ++F  +   + +SW TI+ G++Q+    +AL +F  +Q   +  
Sbjct: 404 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
             +   SVL AC+    +    +IH  I +    +D VI N+++D Y KCG I  +  VF
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF 523

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +  +D++SW ++IS Y  +G A +ALELF  MN++NVES+ IT V+ LS  SS  ++ 
Sbjct: 524 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN 583

Query: 480 KGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMINA 537
            G  L +   I  G        + +V +  R G L+ A +    + +    ++W +++++
Sbjct: 584 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 643

Query: 538 NGLHGRGKVAIDLFYKMEAESFAP-DHITFLAL--LYACSHS 576
             +H    VA+  F   +     P D  T++ L  +YA + S
Sbjct: 644 CIIH--KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGS 683



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 240/495 (48%), Gaps = 25/495 (5%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  C  V DAE +F+ + ++    W AM+  Y  N  P      +S+MRV G   + F  
Sbjct: 207 YSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFAL 266

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+KA   L  +  G  IHG  +K   D+   +  +L+ MYAKC D + AR  F+ M  
Sbjct: 267 TSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE-MIP 325

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            +DV+L + +IS Y+ S Q  +A  LF  + R  ++ N Y+  + LQAC +      G +
Sbjct: 326 YDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQ 385

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   +K G    ++V NAL+  YA+C  M  +  +   L + + VSWN+++ GF Q+ L
Sbjct: 386 IHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGL 445

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F E+Q A     QV   + + A     ++ +  ++H    K  F +D  IGN+
Sbjct: 446 GEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNS 505

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+D YAKC  +    +VF  +  +D ISW  II+GYA +     ALELF  +    ++++
Sbjct: 506 LIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESN 565

Query: 362 VMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            +   ++L  CS       GL      +  HG  I+  +        IV + G+ G ++ 
Sbjct: 566 DITFVALLSVCSSTGLVNHGLSLFDSMRIDHG--IKPSMEH---YTCIVRLLGRAGRLND 620

Query: 415 SRNVFESIES-KDVVSWTSMISS-YVHNGLANEALELF----YLMNEANVESDSITLVSA 468
           +      I S    + W +++SS  +H    N AL  F     L  E   E+  + L + 
Sbjct: 621 ALQFIGDIPSAPSAMVWRALLSSCIIHK---NVALGRFSAEKILEIEPQDETTYVLLSNM 677

Query: 469 LSAASSL---SILKK 480
            +AA SL   ++L+K
Sbjct: 678 YAAAGSLDQVALLRK 692


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/742 (35%), Positives = 410/742 (55%), Gaps = 62/742 (8%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N++++ Y +   F  AR LFD+M  K D+  WN +++ Y+ + +  +A  LF  M    +
Sbjct: 68  NAMISGYLRNAKFSLARDLFDKMPHK-DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDV 126

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           V+                                        NA+++ Y R G + EA  
Sbjct: 127 VS---------------------------------------WNAMLSGYVRSGHVDEARD 147

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD-QVCTVNAVSASGRLG 275
           V  ++ +K+S+SWN +L  +V++    +A + F        K D ++ + N +       
Sbjct: 148 VFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFE------SKSDWELISCNCLMGGYVKR 201

Query: 276 NLL-NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           N+L + ++L      Q  V DL   NT++  YA+   ++   R+F +   +D  +WT ++
Sbjct: 202 NMLGDARQL----FDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMV 257

Query: 335 AGYAQNNCHLKALELFRTV-QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
             Y Q+    +A  +F  + Q   +  +VMI G      +  K M   +E+         
Sbjct: 258 YAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGY-----AQYKRMDMGREL---FEEMPF 309

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
            ++   N ++  Y + G++  +RN+F+ +  +D VSW ++I+ Y  NGL  EA+ +   M
Sbjct: 310 PNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEM 369

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
                  +  T   ALSA + ++ L+ GK+++G ++R G+     V ++LV MY +CG +
Sbjct: 370 KRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCI 429

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
           D A  VF  VQ KD++ W +M+     HG G+ A+ +F  M      PD IT + +L AC
Sbjct: 430 DEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSAC 489

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           SH+GL + G ++   M  DY + P  +HYAC++DLLGRA  LEEA   +R+M  EP A  
Sbjct: 490 SHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAAT 549

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
           W ALLGA R+H N ELGE  A+ + +++P N G YVL+SN++AAS +W DV ++R++MR 
Sbjct: 550 WGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQ 609

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            G++KTPG SW+E+ NKIH+F   D  H E   IY  L E+  K++ E GYV+ T+ VLH
Sbjct: 610 IGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHE-GYVSSTKLVLH 668

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +VEEEEK  ML  HSE+LA+A+G+L    G  IR+ KNLRVC DCH+  K +S++ GR +
Sbjct: 669 DVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLI 728

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           +VRD++R+HHF  G+CSC DYW
Sbjct: 729 IVRDSHRYHHFSEGICSCRDYW 750



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 264/590 (44%), Gaps = 79/590 (13%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           +FD +  R   ++NAM+  Y+ N +     + + +M                      KD
Sbjct: 55  VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMP--------------------HKD 94

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
           L                   F  N ++  YA+    R AR LFD M EK DVV WN+++S
Sbjct: 95  L-------------------FSWNLMLTGYARNRRLRDARMLFDSMPEK-DVVSWNAMLS 134

Query: 134 AYSASGQCLEALGLFREMQRVGLVT-----NAYTFVAALQACE-----DSSFE------T 177
            Y  SG   EA  +F  M     ++      AY     L+         S +E       
Sbjct: 135 GYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCL 194

Query: 178 LGMEIHAATVKSGQNL--QVYVA-----NALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
           +G  +    +   + L  Q+ V      N +I+ YA+ G +++A  +  +   +D  +W 
Sbjct: 195 MGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWT 254

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           +M+  +VQ+ +  +A + F E+    QK +    V  ++   +   +  G+EL     ++
Sbjct: 255 AMVYAYVQDGMLDEARRVFDEMP---QKREMSYNV-MIAGYAQYKRMDMGREL----FEE 306

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
               ++   N ++  Y +   +     +F  M  +D +SW  IIAGYAQN  + +A+ + 
Sbjct: 307 MPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNML 366

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKC 409
             ++ +G   +       L AC+ +  +   K++HG ++R G     ++ NA+V +Y KC
Sbjct: 367 VEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKC 426

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G ID + +VF+ ++ KD+VSW +M++ Y  +G   +AL +F  M  A V+ D IT+V  L
Sbjct: 427 GCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVL 486

Query: 470 SAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQTKD 527
           SA S   +  +G E  +      G        + ++D+  R G L+ A N + N     D
Sbjct: 487 SACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPD 546

Query: 528 LILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
              W +++ A+ +HG    G+ A ++ +KME  +        L+ LYA S
Sbjct: 547 AATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSG--MYVLLSNLYAAS 594



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 183/383 (47%), Gaps = 26/383 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGISVDA 58
           Y + G +  A +LF++   R VFTW AM+ AYV +G   E  RV +   + R +  +V  
Sbjct: 229 YAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNV-- 286

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI----VNSLVAMYAKCYDFRKARQ 114
                +I   A  K +D G ++        ++   F      N +++ Y +  D  +AR 
Sbjct: 287 -----MIAGYAQYKRMDMGREL--------FEEMPFPNIGSWNIMISGYCQNGDLAQARN 333

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           LFD M ++ D V W +II+ Y+ +G   EA+ +  EM+R G   N  TF  AL AC D +
Sbjct: 334 LFDMMPQR-DSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIA 392

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
              LG ++H   V++G      V NAL+ MY +CG + EA  V   +++KD VSWN+ML 
Sbjct: 393 ALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLA 452

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFV 293
           G+ ++    +A+  F  +  AG KPD++  V  +SA    G    G E  H+     G  
Sbjct: 453 GYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGIT 512

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFR 351
            + +    ++D+  +  C+     +   M  + D  +W  ++ A     N  L       
Sbjct: 513 PNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEM 572

Query: 352 TVQLEGLDADVMIIGSVLMACSG 374
             ++E  ++ + ++ S L A SG
Sbjct: 573 VFKMEPHNSGMYVLLSNLYAASG 595



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 227/482 (47%), Gaps = 33/482 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGISVDA 58
           Y + G V +A  +FD++  +   +WN +L AYV +G   E  R+ E+ S   ++  +   
Sbjct: 136 YVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCN--- 192

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFD 117
               C++        L    ++   +        D I  N++++ YA+  D  +AR+LF+
Sbjct: 193 ----CLMGGYVKRNMLGDARQLFDQI-----PVRDLISWNTMISGYAQDGDLSQARRLFE 243

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
                 DV  W +++ AY   G   EA  +F EM +   ++         Q         
Sbjct: 244 E-SPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRE 302

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           L  E+    + S         N +I+ Y + G + +A  +   +  +DSVSW +++ G+ 
Sbjct: 303 LFEEMPFPNIGSW--------NIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYA 354

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN LY +AM    E++  G+  ++     A+SA   +  L  GK++H   ++ G+     
Sbjct: 355 QNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCL 414

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +GN L+ MY KC C++    VF  +  +D +SW T++AGYA++    +AL +F ++   G
Sbjct: 415 VGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAG 474

Query: 358 LDADVMIIGSVLMACSGLKCMSQ-TKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYS 415
           +  D + +  VL ACS      + T+  H      G++      A ++D+ G+ G ++ +
Sbjct: 475 VKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEA 534

Query: 416 RNVFESIE-SKDVVSWTSMI-SSYVHNG--LANEALELFYLMNEANVESDSITLVSALSA 471
           +N+  ++    D  +W +++ +S +H    L  +A E+ + M   N  S    L+S L A
Sbjct: 535 QNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHN--SGMYVLLSNLYA 592

Query: 472 AS 473
           AS
Sbjct: 593 AS 594



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 50/272 (18%)

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF  M  ++ +S+  +I+GY +N     A +LF  +  +    D+     +L   +  + 
Sbjct: 55  VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHK----DLFSWNLMLTGYARNRR 110

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
           +   + +   +  K   D+V  NA++  Y + G++D +R+VF+ +  K+ +SW  ++++Y
Sbjct: 111 LRDARMLFDSMPEK---DVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAY 167

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           V +G   EA  LF        ES S                               + E 
Sbjct: 168 VRSGRLEEARRLF--------ESKS-------------------------------DWEL 188

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
              + L+  Y +   L  A ++F+ +  +DLI W +MI+     G    A  LF     E
Sbjct: 189 ISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLF----EE 244

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           S   D  T+ A++YA    G+++E ++  + M
Sbjct: 245 SPVRDVFTWTAMVYAYVQDGMLDEARRVFDEM 276



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 1/140 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A  +F  V  + + +WN ML  Y  +G   + L  +  M   G+  D  T
Sbjct: 422 MYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEIT 481

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+     D G +  H +    G          ++ +  +     +A+ L   M
Sbjct: 482 MVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNM 541

Query: 120 GEKEDVVLWNSIISAYSASG 139
             + D   W +++ A    G
Sbjct: 542 PFEPDAATWGALLGASRIHG 561



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 44/193 (22%)

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +  + + G+ D +  VF+++  ++ VS+ +MIS Y+ N   + A +LF  M   ++ S +
Sbjct: 40  ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWN 99

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
           + L                                         YAR   L  A  +F+ 
Sbjct: 100 LMLTG---------------------------------------YARNRRLRDARMLFDS 120

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +  KD++ W +M++     G    A D+F +M  +    + I++  LL A   SG + E 
Sbjct: 121 MPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLEEA 176

Query: 583 KKFLEIMRCDYQL 595
           ++  E  + D++L
Sbjct: 177 RRLFE-SKSDWEL 188


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/650 (37%), Positives = 372/650 (57%), Gaps = 8/650 (1%)

Query: 193  LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
            L +  +N LI MY +C +   A  V   +  ++ VSW+++++G V N     ++  F E+
Sbjct: 410  LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469

Query: 253  QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
               G  P++      + A G L  L  G ++H + +K GF   +++GN+L+DMY+KC  +
Sbjct: 470  GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529

Query: 313  NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD--ADVMIIGSVLM 370
            N   +VF ++  +  ISW  +IAG+       KAL+ F  +Q   +    D   + S+L 
Sbjct: 530  NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589

Query: 371  ACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
            ACS    +   K+IHG+++R G    S   I  ++VD+Y KCG +  +R  F+ I+ K +
Sbjct: 590  ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 649

Query: 428  VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
            +SW+S+I  Y   G   EA+ LF  + E N + DS  L S +   +  ++L++GK++   
Sbjct: 650  ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 709

Query: 488  IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
             ++    LE SV +S+VDMY +CG +D A K F  +Q KD+I WT +I   G HG GK +
Sbjct: 710  AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769

Query: 548  IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
            + +FY+M   +  PD + +LA+L ACSHSG+I EG++    +   + + P  EHYAC+VD
Sbjct: 770  VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 829

Query: 608  LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
            LLGRA  L+EA   + +M I+P   +W  LL  CRVH + ELG+ V K LL +D  NP N
Sbjct: 830  LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPAN 889

Query: 668  YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
            YV++SN++  +  W +    R      GLKK  G SW+EI  ++H F + + SH  +  I
Sbjct: 890  YVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVI 949

Query: 728  YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK---STEGS 784
             + L E   +L  E GYV   +  LH++++E K + L  HSE+LAI   +     + +G 
Sbjct: 950  QETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGK 1009

Query: 785  LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
             IR+ KNLRVCVDCH F K +S++     VVRDA RFH FE G CSCGDY
Sbjct: 1010 TIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  243 bits (619), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 268/496 (54%), Gaps = 17/496 (3%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N L+ MY KC +   A ++FD M E+ +VV W++++S +  +G    +L LF EM R G+
Sbjct: 416 NYLIDMYCKCREPLMAYKVFDSMPER-NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI 474

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             N +TF   L+AC   +    G++IH   +K G  + V V N+L+ MY++CG++ EA  
Sbjct: 475 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEK 534

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG--QKPDQVCTVNAVSASGRL 274
           V  ++ ++  +SWN+M+ GFV      KA+  F  +Q A   ++PD+    + + A    
Sbjct: 535 VFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSST 594

Query: 275 GNLLNGKELHAYAIKQGF--VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           G +  GK++H + ++ GF   S   I  +L+D+Y KC  +    + F Q+  +  ISW++
Sbjct: 595 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSS 654

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-- 390
           +I GYAQ    ++A+ LF+ +Q      D   + S++   +    + Q K++    ++  
Sbjct: 655 LILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLP 714

Query: 391 KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
            GL +  +LN++VD+Y KCG +D +   F  ++ KDV+SWT +I+ Y  +GL  +++ +F
Sbjct: 715 SGL-ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIF 773

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKEL-NGFIIRKGFNLEGSVASSLVDMYAR 509
           Y M   N+E D +  ++ LSA S   ++K+G+EL +  +   G        + +VD+  R
Sbjct: 774 YEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGR 833

Query: 510 CGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHIT 565
            G L  A  + + +  K  + +W ++++   +HG    GK    +  +++A++  P +  
Sbjct: 834 AGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKN--PANYV 891

Query: 566 FLALLYACSHSGLINE 581
            ++ LY    +G  NE
Sbjct: 892 MMSNLYG--QAGYWNE 905



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 232/442 (52%), Gaps = 8/442 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC   L A ++FD + +R V +W+A++  +V NG+    L  +S M   GI  + FT
Sbjct: 421 MYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFT 480

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +KAC +L  L+ G +IHG  LK G++    + NSLV MY+KC    +A ++F R+ 
Sbjct: 481 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 540

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV--TNAYTFVAALQACEDSSFETL 178
           ++  ++ WN++I+ +  +G   +AL  F  MQ   +    + +T  + L+AC  +     
Sbjct: 541 DR-SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 599

Query: 179 GMEIHAATVKSGQNLQ--VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           G +IH   V+SG +      +  +L+ +Y +CG +  A     Q++ K  +SW+S++ G+
Sbjct: 600 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 659

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            Q   + +AM  F+ LQ    + D     + +        L  GK++ A A+K     + 
Sbjct: 660 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 719

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N+++DMY KC  V+   + F +M  +D ISWT +I GY ++    K++ +F  +   
Sbjct: 720 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 779

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILNA-IVDVYGKCGNIDY 414
            ++ D +   +VL ACS    + + +E+   ++   G+   V   A +VD+ G+ G +  
Sbjct: 780 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 839

Query: 415 SRNVFESIESKDVVS-WTSMIS 435
           ++++ +++  K  V  W +++S
Sbjct: 840 AKHLIDTMPIKPNVGIWQTLLS 861


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 284/860 (33%), Positives = 451/860 (52%), Gaps = 52/860 (6%)

Query: 15  FDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC-VIKACAMLKD 73
           F+  S    FT    L   VS  EPL         R L  S+     P  +++      D
Sbjct: 62  FNSTSPTQFFTSPQHL---VSLSEPLFA------SRSLNTSLSTIASPFDLLRLSTRYGD 112

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
            D    +H   LK   D   F+ N+L++ Y K    R A ++F  +    +VV + ++IS
Sbjct: 113 PDLARAVHAQFLKLEEDI--FLGNALISAYLKLGLVRDADKVFSGLS-CPNVVSYTALIS 169

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
            +S S    EA+ LF  M   G+  N YTFVA L AC  +    LG ++H   VK G   
Sbjct: 170 GFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLS 229

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V++ NAL+ +Y +CG +     +  ++  +D  SWN++++  V+   Y +A  +FR +Q
Sbjct: 230 CVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQ 289

Query: 254 -GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
              G K D       ++A       + G++LHA A+K G  S L + ++L+  Y KC   
Sbjct: 290 LCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSA 349

Query: 313 NYMGRVFYQMTAQDFISWT-------------------------------TIIAGYAQNN 341
           N +  +F  M  +D I+WT                                ++AG ++N+
Sbjct: 350 NDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRND 409

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILN 400
              +ALELF  +  EG++     + S++ AC  LK    +++I G++++ G LS+  I  
Sbjct: 410 DGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIET 469

Query: 401 AIVDVYGKCGNIDYSRNVF--ESIESKDVVSWTSMISSYVHNGLANEALELFYL-MNEAN 457
           A+VD+Y +CG ++ +  +F   S+E+      TSMI  Y  NG  NEA+ LF+   +E  
Sbjct: 470 ALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGA 529

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           +  D +   S LS   S+   + G +++   ++ G   E  V ++ V MY++C  +D A 
Sbjct: 530 IVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAV 589

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS- 576
           +VFN +  +D++ W  ++  + LH +G  A+ ++ KME     PD ITF  ++ A  H+ 
Sbjct: 590 RVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTE 649

Query: 577 -GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
             L++  +     M  ++ + P  EHYA  + +LGR   LEEA Q +R+M +EP   VW 
Sbjct: 650 LNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWR 709

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL +CR++ N+ L ++ A+ +L ++P +P +Y+L SN+++AS +W   E+VR  MR  G
Sbjct: 710 ALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKG 769

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
            +K P  SWI   NKIHSF ARD+SH +  +IY  L EI      + GYV  T FVL  V
Sbjct: 770 FRKHPSQSWIIHENKIHSFYARDRSHPQGKDIYSGL-EILILECLKVGYVPDTSFVLQEV 828

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           EE +K + L+ HS +LA  +G+L +  G  I+I KN+R+C DCH+F K VS +  R++++
Sbjct: 829 EERQKKEFLFYHSGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILL 888

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD + FH F  G CSC DYW
Sbjct: 889 RDTSGFHWFIDGQCSCTDYW 908



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 149/578 (25%), Positives = 286/578 (49%), Gaps = 45/578 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G V DA+++F  +S   V ++ A++  +  +      +E +  M   GI  + +TF
Sbjct: 140 YLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTF 199

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ AC    D   G+++HG+V+K G  S  FI N+L+ +Y KC       +LF+ M E
Sbjct: 200 VAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPE 259

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLGM 180
           + D+  WN++IS+     +  EA   FR MQ   GL  + ++    L AC  S     G 
Sbjct: 260 R-DITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQ 318

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT------ 234
           ++HA  +K G    + V+++LI  Y +CG   +   +   +  +D ++W  M+T      
Sbjct: 319 QLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFG 378

Query: 235 -------------------------GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
                                    G  +ND   +A++ F E+   G +       + ++
Sbjct: 379 MLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIIT 438

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFI 328
           A G L +    +++  + +K G +S+  I   L+DMY +C  +    ++FYQ + + D+ 
Sbjct: 439 ACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYT 498

Query: 329 SW-TTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHG 386
           +  T++I GYA+N    +A+ LF + Q EG +  D ++  S+L  C  +       ++H 
Sbjct: 499 AMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHC 558

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           + ++ GL ++  + NA V +Y KC N+D +  VF ++  +D+VSW  +++ +V +   ++
Sbjct: 559 HALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDK 618

Query: 446 ALELFYLMNEANVESDSITLVSALSA--ASSLSILKKGKELNGFI-IRKGFNLEGSVA-- 500
           AL ++  M +A ++ DSIT    +SA   + L+++   + L  F+ +    N++ ++   
Sbjct: 619 ALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSL--FVSMETEHNIKPTLEHY 676

Query: 501 SSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMINA 537
           +S + +  R G L+ A +   N     D+ +W +++N+
Sbjct: 677 ASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNS 714



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 241/525 (45%), Gaps = 64/525 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           +Y KCG +    +LF+++ +R + +WN ++ + V   +     + +  M++  G+ VD F
Sbjct: 240 LYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHF 299

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +   ++ ACA       G ++H L LK G +S   + +SL+  Y KC        LF+ M
Sbjct: 300 SLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETM 359

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSS---- 174
             + DV+ W  +I++Y   G    A+ +F +M +   ++ NA   +A L   +D S    
Sbjct: 360 PIR-DVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNA--VLAGLSRNDDGSRALE 416

Query: 175 --FETL--GMEIHAATVKS-------------GQNLQVYV-----------ANALIAMYA 206
              E L  G+EI   T+ S              Q +Q +V             AL+ MY 
Sbjct: 417 LFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYT 476

Query: 207 RCGKMTEAAGVLYQ--LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVC 263
           RCG+M +A  + YQ  LEN  +    SM+ G+ +N    +A+  F   Q  G    D+V 
Sbjct: 477 RCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVM 536

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
           + + +S  G +G    G ++H +A+K G +++  +GN  + MY+KC  ++   RVF  M 
Sbjct: 537 STSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMN 596

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA-----------C 372
            QD +SW  ++AG+  +    KAL +++ ++  G+  D +    ++ A           C
Sbjct: 597 MQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSC 656

Query: 373 SGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWT 431
             L    +T+    + I+  L       + + V G+ G ++ +     ++    DV  W 
Sbjct: 657 RSLFVSMETE----HNIKPTLEHYA---SFISVLGRWGLLEEAEQTIRNMPLEPDVYVWR 709

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESD---SITLVSALSAAS 473
           ++++S   N   NE LE     N   VE     S  L S L +AS
Sbjct: 710 ALLNSCRIN--KNERLEKLAARNILAVEPKDPLSYILKSNLYSAS 752


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/769 (33%), Positives = 428/769 (55%), Gaps = 14/769 (1%)

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
           L+ G KIH  V++ GY    F+ N L+ MYA+    R A  L DRM  + + + WN++I 
Sbjct: 28  LEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRM-PRRNALSWNAVIR 86

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
           A + +G    +L  F+ M + G + +A  F++ ++A        +  E      KSG + 
Sbjct: 87  ANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQEGEIVQEF---AEKSGFDR 143

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
              V  ALI MY RCG++  A     +++ +  VSWN+++T + + D   ++++ FRE+ 
Sbjct: 144 SFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREML 203

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLN--GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
             G  P+ V  +   SA   +   +   G  +H+ +I  G +S   + N++++++ +   
Sbjct: 204 LQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGN 263

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           +     +F +M  +D  SW T+I+ +AQN     AL+L+  + +     D +   +VL A
Sbjct: 264 ITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMTIR---PDGVTFVNVLEA 320

Query: 372 CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           C     + + + IH  +   G  SDL++  A+V +Y +CG +D +  VF +I+   V++ 
Sbjct: 321 CDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITL 380

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFII 489
            ++I+++   G A+ +L  F  M +  +     TLV+ L A ++        ++L+ ++ 
Sbjct: 381 NAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMA 440

Query: 490 RKGFNLEGS---VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
               + +     V ++LV+MYA+CG LD A  +F+     ++  W +++     HG   +
Sbjct: 441 ECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANM 500

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           A+ L Y+M+    +PD I+F A L A SH+  + +G +    +  DY L P  EHY  +V
Sbjct: 501 AVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVV 560

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           DLLGRA  LEEA  F+RSM I   A  W ALLGACR+H +++     A+ ++ +DP +  
Sbjct: 561 DLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGA 620

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
           +Y ++SNV++A+ +W + E++R RM  +G +K PG SWIE+ N++H F  +D+SH  + E
Sbjct: 621 SYTVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGE 680

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
           IY++L E+   L+ E  YV     VLH+VE+E +  +L+ HSE+LA+ +G++ + EGS I
Sbjct: 681 IYERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKI 740

Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            I KNLR+C DCH   KL S+   RE+VVRD  RFHHF  G CSC D W
Sbjct: 741 TIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 266/525 (50%), Gaps = 17/525 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +  S  DAE L D++ +R   +WNA++ A    G+  R L  + RM   G   DA  
Sbjct: 56  MYARLESSRDAELLLDRMPRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVV 115

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IKA   +++   G  +     K G+D +  +  +L+ MY +C    +A+  FDR+ 
Sbjct: 116 FLSLIKAPRTIQE---GEIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQ 172

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTF--VAALQACEDSSFETL 178
           E+  VV WN++I+ YS   +  ++L +FREM   G+  NA T   +A+  A   +   T 
Sbjct: 173 ER-GVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTC 231

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  IH+ ++ SG      VAN++I ++ R G +T A  +  +++ +D  SWN+M++ F Q
Sbjct: 232 GNLIHSCSIDSGLISVTTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQ 291

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N     A+  +  +     +PD V  VN + A     +L  G+ +H      G+ SDL +
Sbjct: 292 NGHSSGALDLYGRMT---IRPDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIV 348

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
              L+ MY +C  ++    VF  +     I+   IIA +AQ      +L  FR +   G+
Sbjct: 349 ATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGI 408

Query: 359 DADVMIIGSVL-MACSGLKCMSQTKEIHGYIIR-KG---LSDLVILNAIVDVYGKCGNID 413
                 + +VL    +     S  +++H ++    G     D+++ NA+V++Y KCG++D
Sbjct: 409 RPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLD 468

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +R +F++    +V +W ++++ Y  +G AN A+ L Y M  A +  D I+  +ALSA+S
Sbjct: 469 AARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASS 528

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA 516
               ++ G  +  + I + + L  SV    ++VD+  R G L+ A
Sbjct: 529 HARQVEDGARIF-YAISRDYGLIPSVEHYGAVVDLLGRAGWLEEA 572



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 214/403 (53%), Gaps = 10/403 (2%)

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
           E +S E  G +IH   ++SG    ++++N L+ MYAR     +A  +L ++  ++++SWN
Sbjct: 24  ESTSLEQ-GRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWN 82

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           +++    Q   + +++ FF+ +   G  PD V  ++ + A      +  G+ +  +A K 
Sbjct: 83  AVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAP---RTIQEGEIVQEFAEKS 139

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           GF     +G  L+ MY +C  ++     F ++  +  +SW  +I  Y++ +   ++L +F
Sbjct: 140 GFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVF 199

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQT--KEIHGYIIRKGL-SDLVILNAIVDVYG 407
           R + L+G+  + + I  +  A +G+     T    IH   I  GL S   + N+I++++G
Sbjct: 200 REMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFG 259

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           + GNI  + ++FE ++ +DV SW +MIS++  NG ++ AL+L+  M    +  D +T V+
Sbjct: 260 RGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRM---TIRPDGVTFVN 316

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            L A      L++G+ ++  +   G++ +  VA++LV MY RCG LD A +VF  +Q   
Sbjct: 317 VLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPG 376

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           +I   ++I A+   GR   ++  F +M      P   T +A+L
Sbjct: 377 VITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVL 419



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 210/430 (48%), Gaps = 12/430 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYG+CG +  A+  FD++ +R V +WNA++  Y    E  + L  +  M + GI+ +A T
Sbjct: 154 MYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVT 213

Query: 61  FPCVIKACAML--KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
             C+  A A +  K   CG  IH   +  G  S   + NS++ ++ +  +  +A  +F++
Sbjct: 214 IICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNITRANDIFEK 273

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M ++ DV  WN++ISA++ +G    AL L+    R+ +  +  TFV  L+AC+       
Sbjct: 274 M-DRRDVCSWNTMISAFAQNGHSSGALDLY---GRMTIRPDGVTFVNVLEACDCPDDLER 329

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  IH      G +  + VA AL++MY RCG++  AA V   +++   ++ N+++    Q
Sbjct: 330 GESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQ 389

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAV-SASGRLGNLLNGKELHAYAIK---QGFVS 294
                 ++  FR++   G +P +   V  + + +        G++LH +  +        
Sbjct: 390 FGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPH 449

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D+ + N L++MYAKC  ++    +F      +  +W  I+AGYAQ+     A+ L   +Q
Sbjct: 450 DILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQ 509

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLV-ILNAIVDVYGKCGNI 412
           L G+  D +   + L A S  + +     I   I R  GL   V    A+VD+ G+ G +
Sbjct: 510 LAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWL 569

Query: 413 DYSRNVFESI 422
           + +     S+
Sbjct: 570 EEAEGFLRSM 579


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/658 (36%), Positives = 379/658 (57%), Gaps = 8/658 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  V SG     +VA+AL  +Y    +  +A  V   + + D+V WN++L G   ++
Sbjct: 144 PLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSE 203

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               A++ F  + GAG  +PD     + + A+  + N   G+ +HA+  K G      + 
Sbjct: 204 ----ALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVV 259

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+ +YAKC  +     +F +M   D +++  +I+GY+ N     ++ELF+ +   GL 
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
                + +++   S          +H ++++ GL ++  +  A+  +Y +  ++D +R  
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+++  K + SW +MIS Y  NGL   A+ LF  M   NV  + +T+ SALSA + L  L
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             GK ++  I  +   L   V ++L+DMY +CG++  A  +F+ +  K+++ W  MI+  
Sbjct: 440 SLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGY 499

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
           GLHG+G  A+ L+  M      P   TFL++LYACSH GL+ EG      M  DY + P 
Sbjct: 500 GLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPG 559

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE-VWCALLGACRVHSNKELGEIVAKKL 657
            EH  C+VDLLGRA  L+EA++ +           +W ALLGAC VH + +L ++ ++KL
Sbjct: 560 IEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKL 619

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
            EL+P N G YVL+SN++ + +++ +   VR   +   L KTPG + IEIG++ H F+A 
Sbjct: 620 FELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAG 679

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D++H +SD IY  L ++T K+  E GY   T+  L++VEEEEK  M+  HSE+LAIA+G+
Sbjct: 680 DRAHPQSDAIYLYLEKLTAKM-IEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGL 738

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L +  G+ IRI KNLRVC+DCH+  K++S++  R +VVRDA+RFHHF  GVCSCGDYW
Sbjct: 739 LNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 265/539 (49%), Gaps = 28/539 (5%)

Query: 40  LRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA------------KIHGLVLKC 87
           LR L T  R  +L  S D+F+F     A ++      G              +H L +  
Sbjct: 96  LRSLPTL-RADLLFPSPDSFSF--AFAATSLASSCSRGGISPPSAASAALRPLHALAVAS 152

Query: 88  GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGL 147
           G+ + +F+ ++L  +Y        AR++FD +    D VLWN++++  S S    EAL  
Sbjct: 153 GFAADNFVASALAKLYFTLSRGNDARKVFDAV-PSPDTVLWNTLLAGLSGS----EALEA 207

Query: 148 FREMQRVGLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           F  M   G V  ++ T  + L A  + +  T+G  +HA   K G     +V   LI++YA
Sbjct: 208 FVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYA 267

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +CG M  A  +  ++E  D V++N++++G+  N +   +++ F+EL G G +P     V 
Sbjct: 268 KCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVA 327

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            +      G+      LHA+ +K G  ++  +   L  +Y +   ++   R F  M  + 
Sbjct: 328 LIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKT 387

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
             SW  +I+GYAQN     A+ LF+ +Q   +  + + I S L AC+ L  +S  K +H 
Sbjct: 388 MESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHK 447

Query: 387 YIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
            I  + L  ++ ++ A++D+Y KCG+I  +R +F+S+++K+VVSW  MIS Y  +G   E
Sbjct: 448 IIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAE 507

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL-NGFIIRKGFNLEGSVASSLV 504
           AL+L+  M +A++   S T +S L A S   ++K+G  +        G        + +V
Sbjct: 508 ALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMV 567

Query: 505 DMYARCGALDIANKVFNCVQTKDL--ILWTSMINANGLHGRG---KVAIDLFYKMEAES 558
           D+  R G L  A ++ +      +   +W +++ A  +H  G   K+A    +++E E+
Sbjct: 568 DLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPEN 626



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 206/427 (48%), Gaps = 33/427 (7%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFTFPCVIKAC 68
           DA ++FD V       WN +L A +S  E    LE + RM   G +  D+ T   V+ A 
Sbjct: 176 DARKVFDAVPSPDTVLWNTLL-AGLSGSE---ALEAFVRMAGAGSVRPDSTTLASVLPAA 231

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW 128
           A + +   G  +H    KCG    + +V  L+++YAKC D   AR LFDRM E  D+V +
Sbjct: 232 AEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRM-EGPDLVTY 290

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           N++IS YS +G    ++ LF+E+  +GL  ++ T VA +        E L   +HA  VK
Sbjct: 291 NALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVK 350

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
           +G +    V+ AL  +Y R   M  A      +  K   SWN+M++G+ QN L   A+  
Sbjct: 351 AGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVAL 410

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           F+++Q    +P+ +   +A+SA  +LG L  GK +H     +    ++ +   L+DMY K
Sbjct: 411 FQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVK 470

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  +     +F  M  ++ +SW  +I+GY  +    +AL+L++ +    L        SV
Sbjct: 471 CGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSV 530

Query: 369 LMACSGLKCMSQTKEIHGYIIRKG-------LSDLVILNAI------VDVYGKCGNIDYS 415
           L ACS           HG ++++G        SD  I   I      VD+ G+ G +   
Sbjct: 531 LYACS-----------HGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQL--- 576

Query: 416 RNVFESI 422
           +  FE I
Sbjct: 577 KEAFELI 583



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 155/330 (46%), Gaps = 11/330 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  A  LFD++    + T+NA++  Y  NG     +E +  +  +G+   + T
Sbjct: 265 LYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSST 324

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I   +          +H  V+K G D+   +  +L  +Y +  D   AR+ FD M 
Sbjct: 325 LVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMP 384

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK  +  WN++IS Y+ +G    A+ LF++MQ + +  N  T  +AL AC      +LG 
Sbjct: 385 EKT-MESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGK 443

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H         L VYV  ALI MY +CG + EA  +   ++NK+ VSWN M++G+  + 
Sbjct: 444 WVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHG 503

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ ++++  A   P     ++ + A    G +  G       + +   SD  I  
Sbjct: 504 QGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGT-----TVFRSMTSDYGITP 558

Query: 301 TLMDMYAKCCC-VNYMGRVFYQMTAQDFIS 329
            +      C C V+ +GR      A + IS
Sbjct: 559 GI----EHCTCMVDLLGRAGQLKEAFELIS 584



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 158/305 (51%), Gaps = 6/305 (1%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           + LHA A+  GF +D  + + L  +Y      N   +VF  + + D + W T++AG + +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS 202

Query: 341 NCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-I 398
               +ALE F R      +  D   + SVL A + +   +  + +H +  + GL+    +
Sbjct: 203 ----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
           +  ++ +Y KCG+++ +R++F+ +E  D+V++ ++IS Y  NG+   ++ELF  +    +
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
              S TLV+ +   S          L+  +++ G +    V+++L  +Y R   +D A +
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARR 378

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
            F+ +  K +  W +MI+    +G  ++A+ LF +M+A +  P+ +T  + L AC+  G 
Sbjct: 379 AFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGA 438

Query: 579 INEGK 583
           ++ GK
Sbjct: 439 LSLGK 443


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/726 (33%), Positives = 400/726 (55%), Gaps = 72/726 (9%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + HA  +KSG     Y++  LIA Y+      +A  +L  + +    S++S++    +  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L+ +++  F  +   G  PD     N       L     GK++H  A   G   D  +  
Sbjct: 96  LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC------------------ 342
           +L  MY +C  +    +VF +M+ +D ++ + ++ GYA+  C                  
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215

Query: 343 -----------------HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
                            H +A+ +F+ +   G   D + + SVL +    + ++  ++IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275

Query: 386 GYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE--------------------- 423
           GY+I++GL  D  +++A++D+YGK G++     +F+  E                     
Sbjct: 276 GYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVD 335

Query: 424 --------------SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
                           +VVSWTS+I+    NG   EALELF  M  A V+ + +T+ S L
Sbjct: 336 KALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSML 395

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
            A  +++ L  G+  +GF +R     +  V S+L+DMYA+CG + ++  VFN + TK+L+
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLV 455

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            W S++N   +HG+ K  + +F  +      PD I+F +LL AC   GL +EG K+  +M
Sbjct: 456 CWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMM 515

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
             +Y + P  EHY+C+V+LLGRA  L+EAY  ++ +  EP + VW ALL +CR+ +N +L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDL 575

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
            EI A+KL  L+P NPG YVL+SN++AA   W +V+ +R +M   GLKK PG SWI++ N
Sbjct: 576 AEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           K+++ +A DKSH + D+I +K+ EI+E++ R+ G+     F L +VEE+E+ QML+GHSE
Sbjct: 636 KVYTLLACDKSHPQIDQITEKMDEISEEM-RKSGHRPNLDFALQDVEEQEQEQMLWGHSE 694

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           +LA+ +G+L + +G+ +++ KNLR+C DCH+  K +S   GRE+ +RD NRFHHF+ G+C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754

Query: 830 SCGDYW 835
           SCGD+W
Sbjct: 755 SCGDFW 760



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 256/568 (45%), Gaps = 79/568 (13%)

Query: 81  HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
           H  +LK G  +  +I   L+A Y+    F  A  +   + +   V  ++S+I A + +  
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPT-VYSFSSLIYALTKAKL 96

Query: 141 CLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANA 200
             +++G+F  M   GL+ + +      + C + S    G +IH     SG ++  +V  +
Sbjct: 97  FSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGS 156

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDS---------------------------------- 226
           L  MY RCG+M +A  V  ++  KD                                   
Sbjct: 157 LFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPN 216

Query: 227 -VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
            VSWN +L+GF ++  + +A+  F+++   G  PDQV   + + + G   NL  G+++H 
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHG 276

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF-------------------------- 319
           Y IKQG + D  + + ++DMY K   V  + ++F                          
Sbjct: 277 YVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDK 336

Query: 320 ---------YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
                     Q    + +SWT+IIAG AQN   ++ALELFR +Q+ G+  + + I S+L 
Sbjct: 337 ALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLP 396

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC  +  +   +  HG+ +R  L D V + +A++D+Y KCG I  S+ VF  + +K++V 
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVC 456

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFI 488
           W S+++ Y  +G A E + +F  +    ++ D I+  S LSA   + +  +G K  N   
Sbjct: 457 WNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMS 516

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR---G 544
              G        S +V++  R G L  A  +   +    D  +W +++N+  L       
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLA 576

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYA 572
           ++A    + +E E+  P     ++ +YA
Sbjct: 577 EIAAQKLFHLEPEN--PGTYVLMSNIYA 602



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 221/504 (43%), Gaps = 82/504 (16%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           DA+ +   +   TV+++++++ A        + +  +SRM   G+  D    P + K CA
Sbjct: 68  DADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCA 127

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------ 123
            L     G +IH +    G D   F+  SL  MY +C     AR++FDRM EK+      
Sbjct: 128 ELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSA 187

Query: 124 ----------------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
                                       ++V WN I+S ++ SG   EA+ +F++M  +G
Sbjct: 188 LLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLG 247

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG------ 209
              +  T  + L +  DS    +G +IH   +K G      V +A++ MY + G      
Sbjct: 248 FCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGII 307

Query: 210 ----------------------------KMTEAAGVLYQLENK-DSVSWNSMLTGFVQND 240
                                       K  E  G+  + + + + VSW S++ G  QN 
Sbjct: 308 KLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNG 367

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ FRE+Q AG KP++V   + + A G +  L +G+  H +A++   + D+ +G+
Sbjct: 368 KDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGS 427

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  +     VF  M  ++ + W +++ GY+ +    + + +F ++    L  
Sbjct: 428 ALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKP 487

Query: 361 DVMIIGSVLMAC-------SGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           D +   S+L AC        G K  +   E +G   R     L   + +V++ G+ G + 
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPR-----LEHYSCMVNLLGRAGKLQ 542

Query: 414 YSRNVFESIE-SKDVVSWTSMISS 436
            + ++ + I    D   W ++++S
Sbjct: 543 EAYDLIKEIPFEPDSCVWGALLNS 566



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 192/456 (42%), Gaps = 90/456 (19%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLE------------- 44
           MY +CG + DA ++FD++S++ V T +A+L  Y   G   E +R+L              
Sbjct: 160 MYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVS 219

Query: 45  -------------------TYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
                               + +M  LG   D  T   V+ +    ++L+ G +IHG V+
Sbjct: 220 WNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVI 279

Query: 86  KCGYDSTDFIVNSLVAMYAKC---------YD----------------------FRKARQ 114
           K G      ++++++ MY K          +D                        KA +
Sbjct: 280 KQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALE 339

Query: 115 LFDRMGEKE---DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           +F    E++   +VV W SII+  + +G+ +EAL LFREMQ  G+  N  T  + L AC 
Sbjct: 340 MFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACG 399

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           + +    G   H   V+      V+V +ALI MYA+CG++  +  V   +  K+ V WNS
Sbjct: 400 NIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNS 459

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQ 290
           ++ G+  +    + M  F  L     KPD +   + +SA G++G    G K  +  + + 
Sbjct: 460 LMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEY 519

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTII-AGYAQ 339
           G    L+        Y+  C VN +GR      A D I           W  ++ +   Q
Sbjct: 520 GIKPRLE-------HYS--CMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQ 570

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
           NN  L  +   +   LE  +    ++ S + A  G+
Sbjct: 571 NNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGM 606


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/638 (38%), Positives = 372/638 (58%), Gaps = 42/638 (6%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           L+  YA    +  A  V  ++  ++ +  N M+  +V N  Y + +Q F  +     KPD
Sbjct: 81  LMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPD 140

Query: 261 Q---VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
                C + A S SG   N++ GK++H  A K G  S L +GN L+ MY KC  ++    
Sbjct: 141 HYTFPCVLKACSCSG---NIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 197

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           V  +M+ +D +SW +++AGYAQN     ALE+ R ++   +  D   + S+L A S    
Sbjct: 198 VLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS---- 253

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
            + T E                           N+ Y +++F  +  K +VSW  MI  Y
Sbjct: 254 -NTTTE---------------------------NVMYVKDMFFKMGKKSLVSWNVMIGVY 285

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           + N +  EA+EL+  M     E D++++ S L A    S L  GK+++G+I RK      
Sbjct: 286 MKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 345

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            + ++L+DMYA+CG LD A  VF  ++++D++ WT+MI+A G  GRG  A+ LF KM+  
Sbjct: 346 LLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDS 405

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              PD I F+  L ACSH+GL+ EG+   ++M   Y++ P  EH AC+VDLLGRA  ++E
Sbjct: 406 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 465

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           AY+F++ M +EP   VW ALLGACRVHSN ++G + A KL +L P   G YVL+SN++A 
Sbjct: 466 AYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 525

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           + +W++V  +R  M+  GLKK PG+S +E+   IH+F+  D+SH +S EIY++L  + +K
Sbjct: 526 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKK 585

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE---GSLIRITKNLRV 794
           + +E GYV  ++  LH+VEEE+K   L  HSE+LAI + ++ + E    + IRITKNLR+
Sbjct: 586 M-KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRI 644

Query: 795 CVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           C DCH   KL+S++  RE+++RD NRFH F  GVCSC 
Sbjct: 645 CGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 207/416 (49%), Gaps = 42/416 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y     V  A ++FD++ +R V   N M+ +YV+NG     ++ +  M    +  D +TF
Sbjct: 85  YASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTF 144

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           PCV+KAC+   ++  G KIHG   K G  ST F+ N LV+MY KC    +AR + D M  
Sbjct: 145 PCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 204

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV WNS+++ Y+ + +  +AL + REM+ V +  +A T  + L A  +++ E +   
Sbjct: 205 R-DVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--- 260

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
                        +YV +    M+ + GK             K  VSWN M+  +++N +
Sbjct: 261 -------------MYVKD----MFFKMGK-------------KSLVSWNVMIGVYMKNAM 290

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ +  ++  G +PD V   + + A G    L  GK++H Y  ++  + +L + N 
Sbjct: 291 PVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 350

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC C++    VF  M ++D +SWT +I+ Y  +     A+ LF  +Q  GL  D
Sbjct: 351 LIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPD 410

Query: 362 VMIIGSVLMACSGLKCMSQTKE-----IHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
            +   + L ACS    + + +         Y I   L  L  +   VD+ G+ G +
Sbjct: 411 SIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACM---VDLLGRAGKV 463



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 34/281 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + +A  + D++S+R V +WN+++  Y  N      LE    M  + IS DA T
Sbjct: 185 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGT 244

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A +                     +T+ +      MY K         +F +MG
Sbjct: 245 MASLLPAVS-------------------NTTTENV------MYVK--------DMFFKMG 271

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K  +V WN +I  Y  +   +EA+ L+  M+  G   +A +  + L AC D+S  +LG 
Sbjct: 272 KKS-LVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGK 330

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH    +      + + NALI MYA+CG +  A  V   ++++D VSW +M++ +  + 
Sbjct: 331 KIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSG 390

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             C A+  F ++Q +G  PD +  V  ++A    G L  G+
Sbjct: 391 RGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGR 431



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 8/220 (3%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYSRNVFE 420
           ++G VL     LK +   + +H  II + L   S L +   ++  Y    ++  +R VF+
Sbjct: 45  MLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGV--KLMRAYASLKDVATARKVFD 99

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            I  ++V+    MI SYV+NG   E +++F  M   +V+ D  T    L A S    +  
Sbjct: 100 EIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVI 159

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++G   + G +    V + LV MY +CG L  A  V + +  +D++ W S++     
Sbjct: 160 GKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQ 219

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
           + R   A+++  +ME+   + D  T  +LL A S++   N
Sbjct: 220 NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 259



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 53/108 (49%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           LK  + ++  II +      S+   L+  YA    +  A KVF+ +  +++I+   MI +
Sbjct: 56  LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRS 115

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
              +G  +  I +F  M +    PDH TF  +L ACS SG I  GKK 
Sbjct: 116 YVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKI 163


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 273/802 (34%), Positives = 413/802 (51%), Gaps = 128/802 (15%)

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED- 124
           K C  L+  +    I   V  CG   +    N +++  +KC     AR+LFD M ++++ 
Sbjct: 14  KVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDEC 73

Query: 125 -----------------------------VVLWNSIISAYSASGQCLEALGLFREMQRVG 155
                                         + W+S+IS Y   G  +EAL LF EMQ  G
Sbjct: 74  SWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEG 133

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
              N +T+ + L+ C        G +IHA  +K+  +   +V   L+ MYA+C  + EA 
Sbjct: 134 ERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAE 193

Query: 216 GVLYQL--ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
             L++L  + ++ V W +M+TG+ QN    KA++ FR+++G G + +Q    + ++A G 
Sbjct: 194 -YLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGS 252

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           +     G ++H   ++ GF +++ +G+ L+DMY+KC  ++   R+   M   D +SW ++
Sbjct: 253 ISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSM 312

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           I G  +     +AL LFR + L  +  D     S                          
Sbjct: 313 IVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPS-------------------------- 346

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
              ++ NA+VD+Y K G  DY+ +VFE +  KDV+SWTS+++  VHNG   EAL LF  M
Sbjct: 347 ---LVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM 403

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
               +  D I + + LSA                           + +SLV MYA+CG +
Sbjct: 404 RIMGIHPDQIVIAAVLSA---------------------------LDNSLVSMYAKCGCI 436

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
           + ANKVF+ ++ +D+I WT++I     +GRG+   D F  ME                  
Sbjct: 437 EDANKVFDSMEIQDVITWTALIVGYAQNGRGR---DYFQSME------------------ 475

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
                        E+    Y + P PEHYAC++DLLGR+  L EA + +  M ++P A V
Sbjct: 476 -------------EV----YGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATV 518

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
           W ALL ACRVH N ELGE  A  L EL+P N   YVL+SN+++A+ KW++  + R  M+ 
Sbjct: 519 WKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKL 578

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            G+ K PG SWIE+ +K+H F++ D+SH  + EIY K+ EI   L +E GYV    F LH
Sbjct: 579 RGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIM-ILIKEAGYVPDMNFALH 637

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +++EE K   L  HSE+LA+A+G+L    G+ IRI KNLR+C DCH+  K VS +F R +
Sbjct: 638 DMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHV 697

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           ++RD+N FHHF  G CSC DYW
Sbjct: 698 ILRDSNCFHHFREGACSCSDYW 719



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 175/622 (28%), Positives = 285/622 (45%), Gaps = 132/622 (21%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLR----------- 41
           KCG V DA +LFD +  R   +WN M+GAY ++G            P+R           
Sbjct: 53  KCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISG 112

Query: 42  ---------VLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDST 92
                     LE +  M+  G   + FT+  V++ C+M   L+ G +IH   +K  +DS 
Sbjct: 113 YCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSN 172

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
            F+V  LV MYAKC    +A  LF+   +K + VLW ++++ YS +G   +A+  FR+M+
Sbjct: 173 AFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMR 232

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
             G+  N +TF + L AC   S    G ++H   V+SG    V+V +AL+ MY++CG ++
Sbjct: 233 GEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLS 292

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
            A  +L  +E  D VSWNSM+ G V+  L  +A+  FR +     K D+           
Sbjct: 293 NARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDE----------- 341

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
                              F     + N L+DMYAK    +Y   VF +MT +D ISWT+
Sbjct: 342 -------------------FTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTS 382

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           ++ G   N  + +AL LF  +++ G+  D ++I +VL A                     
Sbjct: 383 LVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSA--------------------- 421

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
                + N++V +Y KCG I+ +  VF+S+E +DV++WT++I  Y  NG      + F  
Sbjct: 422 -----LDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG---RGRDYFQS 473

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M E                   +  +K G E                 + ++D+  R G 
Sbjct: 474 MEE-------------------VYGIKPGPEH---------------YACMIDLLGRSGK 499

Query: 513 LDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLA 568
           L  A ++ N +  + D  +W +++ A  +HG    G+ A +  +++E ++  P     L+
Sbjct: 500 LMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVP--YVLLS 557

Query: 569 LLYACSHSGLINEGKKFLEIMR 590
            LY  S +G   E  K   +M+
Sbjct: 558 NLY--SAAGKWEEAAKTRRLMK 577



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 166/341 (48%), Gaps = 59/341 (17%)

Query: 1   MYGKCGSVLDAEQLFD-KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KC  +L+AE LF+    +R    W AM+  Y  NG+  + +E +  MR  GI  + F
Sbjct: 182 MYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQF 241

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TFP ++ AC  +     GA++HG +++ G+ +  F+ ++LV MY+KC D   AR++ + M
Sbjct: 242 TFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETM 301

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E +D V WNS+I      G   EAL LFR M    +  + +T+ +              
Sbjct: 302 -EVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPS-------------- 346

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                            V NAL+ MYA+ G    A  V  ++ +KD +SW S++TG V N
Sbjct: 347 ----------------LVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN 390

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             Y +A++ F E++  G  PDQ+     +SA                           + 
Sbjct: 391 GSYEEALRLFCEMRIMGIHPDQIVIAAVLSA---------------------------LD 423

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           N+L+ MYAKC C+    +VF  M  QD I+WT +I GYAQN
Sbjct: 424 NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQN 464



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 62/284 (21%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A ++ + +      +WN+M+   V  G     L  +  M +  + +D FT
Sbjct: 284 MYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFT 343

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P ++                               N+LV MYAK   F  A  +F++M 
Sbjct: 344 YPSLVN------------------------------NALVDMYAKRGYFDYAFDVFEKMT 373

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K DV+ W S+++    +G   EAL LF EM+ +G+  +     A L A +         
Sbjct: 374 DK-DVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALD--------- 423

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                             N+L++MYA+CG + +A  V   +E +D ++W +++ G+ QN 
Sbjct: 424 ------------------NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG 465

Query: 241 LYCKAMQFFRELQGAGQKPDQ-VCTVNAVSASGRLGNLLNGKEL 283
                 Q   E+ G    P+   C ++ +   GR G L+  KEL
Sbjct: 466 RGRDYFQSMEEVYGIKPGPEHYACMIDLL---GRSGKLMEAKEL 506


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/748 (32%), Positives = 399/748 (53%), Gaps = 73/748 (9%)

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +     L N +++AY+ SG+   A  +F EM    L T                      
Sbjct: 44  QAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR--------------------- 82

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                             NAL++  A    + +   +   +  +D+VS+N+++TGF    
Sbjct: 83  ------------------NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTG 124

Query: 241 LYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +++Q +R L +    +P ++     +  +  L +   G  +H   ++ GF +   +G
Sbjct: 125 SPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVG 184

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-------------------------------DFI 328
           + L+DMYAK   +    RVF +M A+                               D I
Sbjct: 185 SPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSI 244

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           +WTT++ G  QN   L+AL++FR ++ EG+  D    GS+L AC  L  + + K+IH YI
Sbjct: 245 TWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYI 304

Query: 389 IRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
            R    D V + +A+VD+Y KC +I  +  VF  +  ++++SWT+MI  Y  N  + EA+
Sbjct: 305 TRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAV 364

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
             F  M    ++ D  TL S +S+ ++L+ L++G + +   +  G     +V+++LV +Y
Sbjct: 365 RAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLY 424

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
            +CG+++ A+++F+ +   D + WT+++      G+ K  IDLF KM A    PD +TF+
Sbjct: 425 GKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFI 484

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
            +L ACS +GL+ +G  + + M+ D+ + P  +HY C++DL  R+   +EA +F++ M  
Sbjct: 485 GVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPH 544

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
            P A  W  LL +CR+  N E+G+  A+ LLE DP NP +YVL+ ++ AA  +W +V  +
Sbjct: 545 SPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHL 604

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           R  MR   +KK PG SWI+  NK+H F A D+SH  S  IY+KL  +  K+  E GY   
Sbjct: 605 RRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEE-GYKPD 663

Query: 748 TQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSR 807
              VLH+V + +KV M+  HSE+LAIA+G++   +   IRI KNLRVCVDCH+  K +S+
Sbjct: 664 VSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISK 723

Query: 808 LFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + GR+++VRDA RFH F  G CSCGD+W
Sbjct: 724 ITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 219/468 (46%), Gaps = 44/468 (9%)

Query: 8   VLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY-SRMRVLGISVDAFTFPCVIK 66
           V D E+LF  + +R   ++NA++  + S G P R ++ Y + +R   +     T   +I 
Sbjct: 95  VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154

Query: 67  ACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK---- 122
             + L D   G  +H  VL+ G+ +  F+ + LV MYAK    R AR++F  M  K    
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214

Query: 123 --------------------------EDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
                                      D + W ++++  + +G  LEAL +FR M+  G+
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YTF + L AC   +    G +IHA   ++     V+V +AL+ MY++C  +  A  
Sbjct: 275 GIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V  ++  ++ +SW +M+ G+ QN    +A++ F E+Q  G KPD     + +S+   L +
Sbjct: 335 VFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLAS 394

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G + H  A+  G +  + + N L+ +Y KC  +    R+F +M+  D +SWT ++ G
Sbjct: 395 LEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTG 454

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYII 389
           YAQ     + ++LF  +   GL  D +    VL ACS       G       ++ HG + 
Sbjct: 455 YAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIV- 513

Query: 390 RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISS 436
              + D      ++D+Y + G    +    + +  S D   W +++SS
Sbjct: 514 --PIDDH--YTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 188/395 (47%), Gaps = 11/395 (2%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           +C  + DA+ LF  +  R   TW  M+     NG  L  L+ + RMR  G+ +D +TF  
Sbjct: 224 RCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++ AC  L  L+ G +IH  + +  Y+   F+ ++LV MY+KC   R A  +F RM  + 
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR- 342

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +++ W ++I  Y  +    EA+  F EMQ  G+  + +T  + + +C + +    G + H
Sbjct: 343 NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              + SG    + V+NAL+ +Y +CG + +A  +  ++   D VSW +++TG+ Q     
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAK 462

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIGNTL 302
           + +  F ++   G KPD V  +  +SA  R G +  G +   +     G V        +
Sbjct: 463 ETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCM 522

Query: 303 MDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKA-LELFRTVQLEGLDA 360
           +D+Y++            QM  + D   W T++     ++C L+  +E+ +      L+ 
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL-----SSCRLRGNMEIGKWAAENLLET 577

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           D     S ++ CS      Q  E+    +R+G+ D
Sbjct: 578 DPQNPASYVLLCSMHAAKGQWTEVAH--LRRGMRD 610



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 117/236 (49%), Gaps = 3/236 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC S+  AE +F +++ R + +W AM+  Y  N      +  +S M++ GI  D FT
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFT 381

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +CA L  L+ GA+ H L L  G      + N+LV +Y KC     A +LFD M 
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM- 440

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V W ++++ Y+  G+  E + LF +M   GL  +  TF+  L AC  +     G 
Sbjct: 441 SFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGC 500

Query: 181 EIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLT 234
           +   +  K    + +      +I +Y+R G+  EA   + Q+ +  D+  W ++L+
Sbjct: 501 DYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/751 (34%), Positives = 427/751 (56%), Gaps = 18/751 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG V +A ++F ++ +R + +WNA++  YV        +  +  M+  G++ ++ T 
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTV 164

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             ++ AC  + +L  G +IHG  L+ G +D   ++  +LV  Y + +D   + ++F  M 
Sbjct: 165 VALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMR-FDAVLSHRVFSLML 223

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + ++V WN+II+ +   G C +AL L+  M   G+  +A T +  +QAC +     LGM
Sbjct: 224 VR-NIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGM 282

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +K      +++ NAL+ MY+  G +  +  +   +   D+  WNSM++ ++   
Sbjct: 283 QLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFG 342

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-----GKELHAYAIKQGFVSD 295
            + +A+  F +++    K D    V  ++    L N LN     G+ LHA+A+K G   D
Sbjct: 343 FHAEAIALFIKMRLERIKED----VRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELD 398

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             +GN L+ MY K   +     VF +M   D ISW T+I+ +AQ+    KA ELF  +  
Sbjct: 399 AYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCE 458

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDY 414
             +  +   I S+L  C     +   + IHG+ I+ GL     LN ++ ++Y  CG+   
Sbjct: 459 SEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERA 518

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAAS 473
           + N+F     +D+VSW S+ISSY+ N  A +AL LF ++++E  +E +S+T+++ L++ +
Sbjct: 519 ATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE--LEPNSVTIINILTSCT 576

Query: 474 SLSILKKGKELNGFIIRKGFNLE--GSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            L+ L  G+ L+ +  R+  +LE   S+A++ + MYARCG L  A K+F  +QT+ ++ W
Sbjct: 577 QLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSW 636

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            +MI   G+HGRG+ A   F +M  + F P++++F ++L ACSHSGL   G +    M  
Sbjct: 637 NAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVR 696

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
           D+ + P   HY C+VDLLGR  H  EA  F+ SM IEP A +W ALL +C++ SN +L E
Sbjct: 697 DFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLE 756

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
            +  KL+EL+P NPGN++L+SN++AA+  W +V Q+R  +R  GL K PG+SWI IGN++
Sbjct: 757 TIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQV 816

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREG 742
           H F A D  H +S+ IY+ L  +T  +   G
Sbjct: 817 HHFTATDVLHPQSERIYENLNSLTSLIRDLG 847



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 187/656 (28%), Positives = 323/656 (49%), Gaps = 10/656 (1%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           WN+++  +        +L TY++M  LGI+ D+ T P V+KAC  L  +  G +IH  + 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
                +   +  +LV  Y KC    +A ++F  M E+ D+V WN++IS Y       EA+
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPER-DLVSWNALISGYVGCLCYKEAV 146

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAM 204
            LF EM++ GL  N+ T VA L AC +     LG EIH   +++G  ++  YV  AL+  
Sbjct: 147 LLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGF 206

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           Y R   +  +  V   +  ++ VSWN+++TGF+      KA++ +  +   G K D V  
Sbjct: 207 YMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           +  + A    G L  G +LH  AIK   ++DL I N L++MY+    +     +F  +  
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS-QTKE 383
            D   W ++I+ Y     H +A+ LF  ++LE +  DV  I  +L  C+ L   S   + 
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRG 385

Query: 384 IHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           +H + ++ G+  D  + NA++ +Y K   I  ++ VFE +   DV+SW +MIS++  +  
Sbjct: 386 LHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMF 445

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
             +A ELF +M E+ ++ +S T+VS L+     S L  G+ ++GF I+ G  +  S+ +S
Sbjct: 446 RAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTS 505

Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           L +MY  CG    A  +F     +DL+ W S+I++   +     A+ LF  M +E   P+
Sbjct: 506 LTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPN 564

Query: 563 HITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
            +T + +L +C+    +  G+       R +  L+         + +  R   L+ A + 
Sbjct: 565 SVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKI 624

Query: 622 VRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
             ++Q       W A++    +H       +   ++  LD G   N V  ++V +A
Sbjct: 625 FCTLQTRSIVS-WNAMITGYGMHGRGRDATLAFAQM--LDDGFKPNNVSFASVLSA 677



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 213/443 (48%), Gaps = 10/443 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   GS+  +  LF+ V       WN+M+ +Y+  G     +  + +MR+  I  D  T
Sbjct: 306 MYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRT 365

Query: 61  FPCVIKACAMLKDLDC-GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              ++  C  L D    G  +H   +K G +   ++ N+L++MY K      A+ +F++M
Sbjct: 366 IAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKM 425

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               DV+ WN++ISA++ S    +A  LF  M    +  N+YT V+ L  C+D S    G
Sbjct: 426 -RGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFG 484

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH   +K+G  +   +  +L  MY  CG    A  +  +   +D VSWNS+++ +++N
Sbjct: 485 RSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKN 544

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GFVSDLQ 297
           D   KA+  F  +  +  +P+ V  +N +++  +L +L  G+ LHAY  ++      D  
Sbjct: 545 DNAGKALLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDAS 603

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N  + MYA+C  + Y  ++F  +  +  +SW  +I GY  +     A   F  +  +G
Sbjct: 604 LANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDG 663

Query: 358 LDADVMIIGSVLMAC--SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
              + +   SVL AC  SGL  ++  +  H  +   G++  L     +VD+ G+ G+   
Sbjct: 664 FKPNNVSFASVLSACSHSGLT-VTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSE 722

Query: 415 SRNVFESIE-SKDVVSWTSMISS 436
           +     S+    D   W +++SS
Sbjct: 723 AIAFINSMPIEPDASIWRALLSS 745



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 188/361 (52%), Gaps = 10/361 (2%)

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           S  WNS++    +       +  + +++  G  PD       + A GRL  + NG  +H+
Sbjct: 25  SKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS 84

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
           +      ++D+++G  L+D Y KC  V    +VF +M  +D +SW  +I+GY    C+ +
Sbjct: 85  FIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKE 144

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL--VILNAIV 403
           A+ LF  ++  GL  +   + ++L+AC  +  +   +EIHGY +R GL D+   +  A+V
Sbjct: 145 AVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALV 204

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
             Y +   +  S  VF  +  +++VSW ++I+ +++ G   +AL+L+  M    ++ D++
Sbjct: 205 GFYMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAV 263

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS--VASSLVDMYARCGALDIANKVFN 521
           T++  + A +    L+ G +L+   I+  FNL     + ++L++MY+  G+L+ +  +FN
Sbjct: 264 TMLVVIQACAEYGCLRLGMQLHQLAIK--FNLINDLFILNALLNMYSDNGSLESSWALFN 321

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            V T D  LW SMI++    G    AI LF KM  E    D  T   +L  C+    +N+
Sbjct: 322 AVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCND---LND 378

Query: 582 G 582
           G
Sbjct: 379 G 379



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 189/407 (46%), Gaps = 27/407 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   +  A+ +F+K+    V +WN M+ A+  +    +  E +  M    I  +++T
Sbjct: 408 MYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYT 467

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++  C    DL  G  IHG  +K G +    +  SL  MY  C D R A  +F R  
Sbjct: 468 IVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCP 527

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ D+V WNS+IS+Y  +    +AL LF  M    L  N+ T +  L +C   +   LG 
Sbjct: 528 QR-DLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILTSCTQLAHLPLGQ 585

Query: 181 EIHAATVKSGQNLQV--YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            +HA T +   +L++   +ANA I MYARCGK+  A  +   L+ +  VSWN+M+TG+  
Sbjct: 586 CLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGM 645

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A   F ++   G KP+ V   + +SA    G  + G +L         V D  I
Sbjct: 646 HGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLF-----HSMVRDFGI 700

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAGYAQNNCHLKALE 348
              L   Y   C V+ +GR  +   A  FI+          W  +++   Q   + K LE
Sbjct: 701 APQLTH-YG--CMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSS-CQIKSNNKLLE 756

Query: 349 LF--RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
               + V+LE  +    I+ S + A +GL   S+  +I  ++  +GL
Sbjct: 757 TIFGKLVELEPSNPGNFILLSNIYAAAGL--WSEVVQIRKWLRERGL 801


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/747 (32%), Positives = 417/747 (55%), Gaps = 9/747 (1%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F+ N ++ MY KC     ARQ+FDR+ ++ +   W+ ++  Y  +    EAL +++EM R
Sbjct: 3   FLANMIIQMYGKCKSPEDARQVFDRIKQR-NAFSWSILVECYVQNAMYQEALEVYKEMVR 61

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
             +  +AYT  + L AC        G  +     + G    V VA +LI ++A+CG + E
Sbjct: 62  KEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEE 121

Query: 214 AAGVLYQL-ENKDSVSWNSMLTGFV---QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
           A  V   +   +D +S  +M+  +V   +NDL   A+  + +++  G +PD       + 
Sbjct: 122 AESVFRSMGAMRDIISVTAMIGAYVRHGKNDL---ALDTYWKMRSQGLEPDAFTYAAILG 178

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A      LL+GK +H + ++     ++ + N L+ MYAKC  +     +F  M  +D +S
Sbjct: 179 ACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVS 238

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W  +IA Y        A  LF  +   G   D+    S+L AC+  K +   + +H  I 
Sbjct: 239 WNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRIT 298

Query: 390 RKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
            +G   D  + N ++ ++ +CG+++ +R  F SIE K++ +W +M+++Y       +AL 
Sbjct: 299 ARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALF 358

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           L+  M       D  T  S + + +SL  L++GK ++      GF  +  + ++LV+MYA
Sbjct: 359 LYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYA 418

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           +CG+L  A K F+ +  KD++ W++MI A+  HG  + A++L + M  +  A + +T  +
Sbjct: 419 KCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASS 478

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L+ACSH G + EG  +   +  D+ ++   E+    +DLLGRA  L+EA   + +M  +
Sbjct: 479 VLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFK 538

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
            +      LLG C+VH +   G+ + K+++ L+P NPG+YVL++N++AA+ +W DV ++R
Sbjct: 539 VSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLR 598

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
             MR  G+K+  G S IE  +KI+ F   D S+  + EI  +L  +  +++ E GYV  T
Sbjct: 599 RYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDT 658

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
           + V H+V +++K ++L  HSE++A+ +G++ S  GS +RI KNLRVC DCH+  KL S++
Sbjct: 659 RDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKI 718

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
            GR ++VRD  RFHHFE G+CSCGDYW
Sbjct: 719 TGRRIIVRDGTRFHHFEGGICSCGDYW 745



 Score =  288 bits (738), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 183/598 (30%), Positives = 298/598 (49%), Gaps = 14/598 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC S  DA Q+FD++ QR  F+W+ ++  YV N      LE Y  M    IS+DA+T
Sbjct: 11  MYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKEISIDAYT 70

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  L D++ G  +     + G++    +  SL+ ++AKC    +A  +F  MG
Sbjct: 71  LSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMG 130

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D++   ++I AY   G+   AL  + +M+  GL  +A+T+ A L AC    F   G 
Sbjct: 131 AMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGK 190

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   ++S     + V NALI MYA+CG + ++  +   ++ KD VSWN+M+  +    
Sbjct: 191 HIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYG 250

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A   F  +   G  PD     + + A      L +G+ LH     +GF  D  + N
Sbjct: 251 HDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQN 310

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ M+ +C  +    R FY +  ++  +W T++A YAQ +    AL L++ + LEG   
Sbjct: 311 NLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTP 370

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVF 419
           D     SV+ +C+ L  + + K IH      G    VIL  A+V++Y KCG++  ++  F
Sbjct: 371 DRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSF 430

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + I +KDVVSW++MI++   +G A EALEL +LMN   +  + +T  S L A S    L 
Sbjct: 431 DGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLY 490

Query: 480 KGKELNGFI-IRKGFNLEGSVASSL--VDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           +G  ++ F+ + + F +E    +++  +D+  R G L  A  V + +  K   +   +++
Sbjct: 491 EG--IDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLL 548

Query: 536 NANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
               +HG   RGK        +E E+  P     L  +YA   +G  ++  K    MR
Sbjct: 549 GGCKVHGDVRRGKALTKRIVALEPEN--PGSYVLLNNMYAA--AGRWDDVAKLRRYMR 602



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 179/348 (51%), Gaps = 4/348 (1%)

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D  + N ++ MY KC       +VF ++  ++  SW+ ++  Y QN  + +ALE+++ + 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
            + +  D   + SVL AC+ L  + + + +       G   D+V+  +++ ++ KCG ++
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 414 YSRNVFESIES-KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
            + +VF S+ + +D++S T+MI +YV +G  + AL+ ++ M    +E D+ T  + L A 
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           SS   L  GK ++  I+        SV ++L+ MYA+CG+L  +  +F  +  KD++ W 
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           +MI A  L+G  K A  LF++M      PD  TF ++L AC+    + +G + L +    
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDG-RMLHVRITA 299

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
              D        L+ +  R   LE A ++  S++ +     W  +L A
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELG-AWNTMLAA 346



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 151/296 (51%), Gaps = 5/296 (1%)

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           D  + N I+ +YGKC + + +R VF+ I+ ++  SW+ ++  YV N +  EALE++  M 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              +  D+ TL S L+A + L  +++G+ +       GF  +  VA+SL+ ++A+CG L+
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 515 IANKVFNCV-QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
            A  VF  +   +D+I  T+MI A   HG+  +A+D ++KM ++   PD  T+ A+L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           S    + +GK   + +             A L+ +  +   L+++     +M ++     
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNA-LITMYAKCGSLKDSKSLFLTMDVKDVVS- 238

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
           W A++ A  ++ + +    +  ++  L  G+  +    S++  A    K +E  RM
Sbjct: 239 WNAMIAAYTLYGHDKDAFSLFHRMCTL--GHTPDIYTFSSILGACASPKRLEDGRM 292


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/571 (39%), Positives = 363/571 (63%), Gaps = 8/571 (1%)

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
           G   +L +   +H + +  G   D  +   L+ MY+    V+Y  +VF +   +    W 
Sbjct: 88  GHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWN 147

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC----MSQTKEIHGY 387
            +           + L L+  +   G+++D      VL AC   +C    + + KEIH +
Sbjct: 148 ALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAH 207

Query: 388 IIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           + R+G S  V I+  +VD+Y + G +DY+  VF  +  ++VVSW++MI+ Y  NG A EA
Sbjct: 208 LTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEA 267

Query: 447 LELFYLMNEANVES--DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           L  F  M     +S  +S+T+VS L A +SL+ L++GK ++G+I+R+G +    V S+LV
Sbjct: 268 LRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALV 327

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
            MY RCG L++  +VF+ +  +D++ W S+I++ G+HG GK AI +F +M A   +P  +
Sbjct: 328 TMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPV 387

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF+++L ACSH GL+ EGK+  E M  D+ + P  EHYAC+VDLLGRAN L+EA + V+ 
Sbjct: 388 TFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQD 447

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M+ EP  +VW +LLG+CR+H N EL E  +++L  L+P N GNYVL+++++A ++ W +V
Sbjct: 448 MRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEV 507

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
           ++V+  +   GL+K PG  W+E+  K++SF++ D+ +   ++I+  L ++ E + +E GY
Sbjct: 508 KRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDM-KEKGY 566

Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
           + QT+ VL+ +E EEK +++ GHSE+LA+A+G++ +++G  IRITKNLR+C DCH F K 
Sbjct: 567 IPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKF 626

Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +S+   +E++VRD NRFH F+ GVCSCGDYW
Sbjct: 627 ISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 226/472 (47%), Gaps = 20/472 (4%)

Query: 31  GAYVSNGEPLRVL----ETYSRMRVLG--ISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
           GA +SN + ++ L    +    +RVL    S    T+  +I  C     L    ++H  +
Sbjct: 44  GAKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHI 103

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           L  G D   F+   L+ MY+       AR++FD+   K  + +WN++  A + +G   E 
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT-RKRTIYVWNALFRALTLAGHGEEV 162

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFET----LGMEIHAATVKSGQNLQVYVANA 200
           LGL+ +M R+G+ ++ +T+   L+AC  S         G EIHA   + G +  VY+   
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL--QGAGQK 258
           L+ MYAR G +  A+ V   +  ++ VSW++M+  + +N    +A++ FRE+  +     
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P+ V  V+ + A   L  L  GK +H Y +++G  S L + + L+ MY +C  +    RV
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F +M  +D +SW ++I+ Y  +    KA+++F  +   G     +   SVL ACS    +
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402

Query: 379 SQTKEIHGYIIR-KGLSDLVILNA-IVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMIS 435
            + K +   + R  G+   +   A +VD+ G+   +D +  + + + ++     W S++ 
Sbjct: 403 EEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462

Query: 436 SYVHNG---LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           S   +G   LA  A    + +   N   + + L    + A     +K+ K+L
Sbjct: 463 SCRIHGNVELAERASRRLFALEPKNA-GNYVLLADIYAEAQMWDEVKRVKKL 513



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/291 (34%), Positives = 155/291 (53%), Gaps = 11/291 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   GSV  A ++FDK  +RT++ WNA+  A    G    VL  Y +M  +G+  D FT
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180

Query: 61  FPCVIKACA----MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK--CYDFRKARQ 114
           +  V+KAC      +  L  G +IH  + + GY S  +I+ +LV MYA+  C D+  A  
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDY--ASY 238

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR--VGLVTNAYTFVAALQACED 172
           +F  M  + +VV W+++I+ Y+ +G+  EAL  FREM R       N+ T V+ LQAC  
Sbjct: 239 VFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACAS 297

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
            +    G  IH   ++ G +  + V +AL+ MY RCGK+     V  ++ ++D VSWNS+
Sbjct: 298 LAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSL 357

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           ++ +  +    KA+Q F E+   G  P  V  V+ + A    G +  GK L
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/751 (34%), Positives = 427/751 (56%), Gaps = 18/751 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG V +A ++F ++ +R + +WNA++  YV        +  +  M+  G++ ++ T 
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTV 164

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             ++ AC  + +L  G +IHG  L+ G +D   ++  +LV  Y + +D   + ++F  M 
Sbjct: 165 VALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMR-FDAVLSHRVFSLML 223

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + ++V WN+II+ +   G C +AL L+  M   G+  +A T +  +QAC +     LGM
Sbjct: 224 VR-NIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGM 282

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +K      +++ NAL+ MY+  G +  +  +   +   D+  WNSM++ ++   
Sbjct: 283 QLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFG 342

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-----GKELHAYAIKQGFVSD 295
            + +A+  F +++    K D    V  ++    L N LN     G+ LHA+A+K G   D
Sbjct: 343 FHAEAIALFIKMRLERIKED----VRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELD 398

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             +GN L+ MY K   +     VF +M   D ISW T+I+ +AQ+    KA ELF  +  
Sbjct: 399 AYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCE 458

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDY 414
             +  +   I S+L  C     +   + IHG+ I+ GL     LN ++ ++Y  CG+   
Sbjct: 459 SEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERA 518

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAAS 473
           + N+F     +D+VSW S+ISSY+ N  A +AL LF ++++E  +E +S+T+++ L++ +
Sbjct: 519 ATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE--LEPNSVTIINILTSCT 576

Query: 474 SLSILKKGKELNGFIIRKGFNLE--GSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            L+ L  G+ L+ +  R+  +LE   S+A++ + MYARCG L  A K+F  +QT+ ++ W
Sbjct: 577 QLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSW 636

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            +MI   G+HGRG+ A   F +M  + F P++++F ++L ACSHSGL   G +    M  
Sbjct: 637 NAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVR 696

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
           D+ + P   HY C+VDLLGR  H  EA  F+ SM IEP A +W ALL +C++ SN +L E
Sbjct: 697 DFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLE 756

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
            +  KL+EL+P NPGN++L+SN++AA+  W +V Q+R  +R  GL K PG+SWI IGN++
Sbjct: 757 TIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQV 816

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREG 742
           H F A D  H +S+ IY+ L  +T  +   G
Sbjct: 817 HHFTATDVLHPQSERIYENLNSLTSLIRDLG 847



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 187/656 (28%), Positives = 323/656 (49%), Gaps = 10/656 (1%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           WN+++  +        +L TY++M  LGI+ D+ T P V+KAC  L  +  G +IH  + 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
                +   +  +LV  Y KC    +A ++F  M E+ D+V WN++IS Y       EA+
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPER-DLVSWNALISGYVGCLCYKEAV 146

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAM 204
            LF EM++ GL  N+ T VA L AC +     LG EIH   +++G  ++  YV  AL+  
Sbjct: 147 LLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGF 206

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           Y R   +  +  V   +  ++ VSWN+++TGF+      KA++ +  +   G K D V  
Sbjct: 207 YMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           +  + A    G L  G +LH  AIK   ++DL I N L++MY+    +     +F  +  
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS-QTKE 383
            D   W ++I+ Y     H +A+ LF  ++LE +  DV  I  +L  C+ L   S   + 
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRG 385

Query: 384 IHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           +H + ++ G+  D  + NA++ +Y K   I  ++ VFE +   DV+SW +MIS++  +  
Sbjct: 386 LHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMF 445

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
             +A ELF +M E+ ++ +S T+VS L+     S L  G+ ++GF I+ G  +  S+ +S
Sbjct: 446 RAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTS 505

Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           L +MY  CG    A  +F     +DL+ W S+I++   +     A+ LF  M +E   P+
Sbjct: 506 LTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPN 564

Query: 563 HITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
            +T + +L +C+    +  G+       R +  L+         + +  R   L+ A + 
Sbjct: 565 SVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKI 624

Query: 622 VRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
             ++Q       W A++    +H       +   ++  LD G   N V  ++V +A
Sbjct: 625 FCTLQTRSIVS-WNAMITGYGMHGRGRDATLAFAQM--LDDGFKPNNVSFASVLSA 677



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 213/443 (48%), Gaps = 10/443 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   GS+  +  LF+ V       WN+M+ +Y+  G     +  + +MR+  I  D  T
Sbjct: 306 MYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRT 365

Query: 61  FPCVIKACAMLKDLDC-GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              ++  C  L D    G  +H   +K G +   ++ N+L++MY K      A+ +F++M
Sbjct: 366 IAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKM 425

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               DV+ WN++ISA++ S    +A  LF  M    +  N+YT V+ L  C+D S    G
Sbjct: 426 -RGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFG 484

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH   +K+G  +   +  +L  MY  CG    A  +  +   +D VSWNS+++ +++N
Sbjct: 485 RSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKN 544

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GFVSDLQ 297
           D   KA+  F  +  +  +P+ V  +N +++  +L +L  G+ LHAY  ++      D  
Sbjct: 545 DNAGKALLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDAS 603

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N  + MYA+C  + Y  ++F  +  +  +SW  +I GY  +     A   F  +  +G
Sbjct: 604 LANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDG 663

Query: 358 LDADVMIIGSVLMAC--SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
              + +   SVL AC  SGL  ++  +  H  +   G++  L     +VD+ G+ G+   
Sbjct: 664 FKPNNVSFASVLSACSHSGLT-VTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSE 722

Query: 415 SRNVFESIE-SKDVVSWTSMISS 436
           +     S+    D   W +++SS
Sbjct: 723 AIAFINSMPIEPDASIWRALLSS 745



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 187/361 (51%), Gaps = 10/361 (2%)

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           S  WNS++    +       +  + +++  G  PD       + A GRL  + NG  +H+
Sbjct: 25  SKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS 84

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
                  ++D+++G  L+D Y KC  V    +VF +M  +D +SW  +I+GY    C+ +
Sbjct: 85  CIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKE 144

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL--VILNAIV 403
           A+ LF  ++  GL  +   + ++L+AC  +  +   +EIHGY +R GL D+   +  A+V
Sbjct: 145 AVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALV 204

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
             Y +   +  S  VF  +  +++VSW ++I+ +++ G   +AL+L+  M    ++ D++
Sbjct: 205 GFYMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAV 263

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS--VASSLVDMYARCGALDIANKVFN 521
           T++  + A +    L+ G +L+   I+  FNL     + ++L++MY+  G+L+ +  +FN
Sbjct: 264 TMLVVIQACAEYGCLRLGMQLHQLAIK--FNLINDLFILNALLNMYSDNGSLESSWALFN 321

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            V T D  LW SMI++    G    AI LF KM  E    D  T   +L  C+    +N+
Sbjct: 322 AVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCND---LND 378

Query: 582 G 582
           G
Sbjct: 379 G 379



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 189/407 (46%), Gaps = 27/407 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   +  A+ +F+K+    V +WN M+ A+  +    +  E +  M    I  +++T
Sbjct: 408 MYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYT 467

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++  C    DL  G  IHG  +K G +    +  SL  MY  C D R A  +F R  
Sbjct: 468 IVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCP 527

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ D+V WNS+IS+Y  +    +AL LF  M    L  N+ T +  L +C   +   LG 
Sbjct: 528 QR-DLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILTSCTQLAHLPLGQ 585

Query: 181 EIHAATVKSGQNLQV--YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            +HA T +   +L++   +ANA I MYARCGK+  A  +   L+ +  VSWN+M+TG+  
Sbjct: 586 CLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGM 645

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A   F ++   G KP+ V   + +SA    G  + G +L         V D  I
Sbjct: 646 HGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLF-----HSMVRDFGI 700

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAGYAQNNCHLKALE 348
              L   Y   C V+ +GR  +   A  FI+          W  +++   Q   + K LE
Sbjct: 701 APQLTH-YG--CMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSS-CQIKSNNKLLE 756

Query: 349 LF--RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
               + V+LE  +    I+ S + A +GL   S+  +I  ++  +GL
Sbjct: 757 TIFGKLVELEPSNPGNFILLSNIYAAAGL--WSEVVQIRKWLRERGL 801


>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 233/559 (41%), Positives = 354/559 (63%), Gaps = 7/559 (1%)

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           N +E+HA   K     D  IG+ L+  Y K        ++F  M  +D +SW ++I+G++
Sbjct: 57  NCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFS 116

Query: 339 QNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
           +  C   +L  F T++ E  +  + + I S++ ACSG   +   K IHG+ I+ G + ++
Sbjct: 117 R--CLHMSLTAFYTMKFEMSVKPNEVTILSMISACSG--ALDAGKYIHGFGIKVGGTLEV 172

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            + N+++++YGK G++  +  +FE+I   + VSW S+I++ V NG A E ++ F  M   
Sbjct: 173 KVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRL 232

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +E D  T+++ L A   L + K  + ++G +   GF  + ++A++L+D YA+ G L  +
Sbjct: 233 GIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSAS 292

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             VF  V   D + WT+M+     HG G+ AI LF  M  +   PDH+TF  LL ACSHS
Sbjct: 293 YGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHS 352

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           GL+NEGK +  +M   Y ++P  +HY+C+VDLLGR   L +AY+ +++M +EP A VW A
Sbjct: 353 GLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGA 412

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LLGACRVH N ELG+ VA+ L+ ++P +P NY+++SN+++ASR WKD  +VR  ++  GL
Sbjct: 413 LLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGL 472

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           K+TPG S IE GNK H F   D+SH E+++IY KL E+  K+ R+ GY ++T++VL +VE
Sbjct: 473 KRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKI-RKAGYSSKTEYVLQDVE 531

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EE K  M+  HSE+LAIA+G+L S EG  + ITKNLR+C DCHS  KL+S +  R +++R
Sbjct: 532 EEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIR 591

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D  RFHHF  G CSC DYW
Sbjct: 592 DPKRFHHFSDGFCSCADYW 610



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 202/408 (49%), Gaps = 26/408 (6%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           +IH  V K       FI + LV  Y K      A +LFD M  K D+V WNS+IS +S  
Sbjct: 60  EIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHK-DLVSWNSLISGFS-- 116

Query: 139 GQCLE-ALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +CL  +L  F  M+  + +  N  T ++ + AC  S     G  IH   +K G  L+V 
Sbjct: 117 -RCLHMSLTAFYTMKFEMSVKPNEVTILSMISAC--SGALDAGKYIHGFGIKVGGTLEVK 173

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           VAN+LI MY + G +T A  +   + + ++VSWNS++   V N    + + +F +++  G
Sbjct: 174 VANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLG 233

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            + D+   +  + A   LG     + +H      GF + + I   L+D YAK   ++   
Sbjct: 234 IEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASY 293

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            VF ++   D ++WT ++AGYA +    +A++LF ++  +GL+ D +    +L ACS   
Sbjct: 294 GVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSG 353

Query: 377 CMSQTK-------EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVV 428
            +++ K       E++G   R     +   + +VD+ G+CG ++ +  V +++    +  
Sbjct: 354 LVNEGKSYFNVMSEVYGIEPR-----VDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAG 408

Query: 429 SWTSMISS-YVHNG--LANEALELFYLMNEANVESDSITLVSALSAAS 473
            W +++ +  VH    L  E  E  +L+N   ++  +  ++S + +AS
Sbjct: 409 VWGALLGACRVHGNIELGKEVAE--HLINMEPLDPRNYIMLSNMYSAS 454



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 157/325 (48%), Gaps = 5/325 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G   DA +LFD +  + + +WN+++  + S    + +   Y+    + +  +  T 
Sbjct: 84  YNKLGYAEDALKLFDDMPHKDLVSWNSLISGF-SRCLHMSLTAFYTMKFEMSVKPNEVTI 142

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             +I AC+    LD G  IHG  +K G      + NSL+ MY K  D   A +LF+ + +
Sbjct: 143 LSMISACS--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPD 200

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             + V WNSII+A   +G   E +  F +M+R+G+  +  T +A LQAC       L   
Sbjct: 201 P-NTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAES 259

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH     +G   ++ +A AL+  YA+ G+++ + GV  ++   D V+W +ML G+  + L
Sbjct: 260 IHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGL 319

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIGN 300
             +A++ F  +   G +PD V   + +SA    G +  GK   +  +   G    +   +
Sbjct: 320 GREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYS 379

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQ 325
            ++D+  +C  +N    V   M  +
Sbjct: 380 CMVDLLGRCGLLNDAYEVIQNMPME 404



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGK G +  A +LF+ +      +WN+++ A V+NG     ++ +++MR LGI  D  T
Sbjct: 181 MYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGT 240

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +++AC  L        IHGL+   G+ +   I  +L+  YAK      +  +F  +G
Sbjct: 241 ILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVG 300

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V W ++++ Y+A G   EA+ LF  M   GL  +  TF   L AC  S     G 
Sbjct: 301 FA-DRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGK 359

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
              +  +   G   +V   + ++ +  RCG + +A  V+  +  + +   W ++L
Sbjct: 360 SYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALL 414



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 10/123 (8%)

Query: 465 LVSAL-SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           +VSAL  A +S   +   +E++  + +     +G +   LV  Y + G  + A K+F+ +
Sbjct: 41  IVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDM 100

Query: 524 QTKDLILWTSMIN--ANGLHGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACSHSGLIN 580
             KDL+ W S+I+  +  LH    +++  FY M+ E S  P+ +T L+++ AC  SG ++
Sbjct: 101 PHKDLVSWNSLISGFSRCLH----MSLTAFYTMKFEMSVKPNEVTILSMISAC--SGALD 154

Query: 581 EGK 583
            GK
Sbjct: 155 AGK 157


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 226/555 (40%), Positives = 356/555 (64%), Gaps = 3/555 (0%)

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           +HA  IK    SD  IG+ L+ MY K        R+F +M  +D +SW ++++G +    
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220

Query: 343 HLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILN 400
               L  F  ++ E G   + + + SV+ AC+ +  + + K +HG +++ G+S    ++N
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVN 280

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           +++++YGK G +D +  +FE +  + +VSW SM+  + HNG A + ++LF LM  A +  
Sbjct: 281 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 340

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D  T+V+ L A +   + ++ + ++ +I R GFN +  +A++L+++YA+ G L+ +  +F
Sbjct: 341 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 400

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
             ++ +D I WT+M+    +H  G+ AI LF  M  E    DH+TF  LL ACSHSGL+ 
Sbjct: 401 EEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 460

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           EGKK+ EIM   Y+++P  +HY+C+VDLLGR+  LE+AY+ ++SM +EP++ VW ALLGA
Sbjct: 461 EGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGA 520

Query: 641 CRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTP 700
           CRV+ N ELG+ VA++LL LDP +  NY+++SN+++A+  W+   +VR  M+   L + P
Sbjct: 521 CRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNP 580

Query: 701 GSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEK 760
           G S+IE GNKIH F+  D+ H  SDEI+ KL E+  K+  E G   +T+FVLH+++EE K
Sbjct: 581 GCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIX-EAGCAPKTEFVLHDIDEEVK 639

Query: 761 VQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANR 820
           V M+  HSE+LAIA+G+L +  G  + ITKNLR+C DCHS  K  S L  R +++RD+ R
Sbjct: 640 VDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKR 699

Query: 821 FHHFEAGVCSCGDYW 835
           FHHF  G+CSC DYW
Sbjct: 700 FHHFADGLCSCRDYW 714



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 163/318 (51%), Gaps = 10/318 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAF 59
           MY K G   DA++LFD++  R + +WN+++      G     L  + RMR   G   +  
Sbjct: 183 MYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEV 242

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V+ ACA +  LD G  +HG+V+K G      +VNSL+ MY K      A QLF+ M
Sbjct: 243 TLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 302

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             +  +V WNS++  ++ +G   + + LF  M+R G+  +  T VA L+AC D+      
Sbjct: 303 PVRS-LVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQA 361

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IHA   + G N  + +A AL+ +YA+ G++  +  +  +++++D+++W +ML G+  +
Sbjct: 362 ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVH 421

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A++ F  +   G + D V   + +SA    G +  GK+          +S++   
Sbjct: 422 ACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFE------IMSEVYRV 475

Query: 300 NTLMDMYAKCCCVNYMGR 317
              +D Y+  C V+ +GR
Sbjct: 476 EPRLDHYS--CMVDLLGR 491



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 174/352 (49%), Gaps = 7/352 (1%)

Query: 76  CGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
           C A IH  V+K    S  FI + LV+MY K      A++LFD M  + D+V WNS++S  
Sbjct: 158 CSA-IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNR-DLVSWNSLMSGL 215

Query: 136 SASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
           S  G     L  F  M+   G   N  T ++ + AC        G  +H   VK G + +
Sbjct: 216 SGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGK 275

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
             V N+LI MY + G +  A+ +  ++  +  VSWNSM+     N    K M  F  ++ 
Sbjct: 276 AKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR 335

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
           AG  PDQ   V  + A    G     + +HAY  + GF +D+ I   L+++YAK   +N 
Sbjct: 336 AGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNA 395

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
              +F ++  +D I+WT ++AGYA + C  +A++LF  +  EG++ D +    +L ACS 
Sbjct: 396 SEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 455

Query: 375 LKCMSQTK---EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
              + + K   EI   + R     L   + +VD+ G+ G ++ +  + +S+ 
Sbjct: 456 SGLVEEGKKYFEIMSEVYRVE-PRLDHYSCMVDLLGRSGRLEDAYELIKSMP 506



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 108/215 (50%), Gaps = 12/215 (5%)

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI--TLVSALSAASSLS 476
           F +I      + TS  +S   +     A+ L  L N +++ +DSI  +LV A+S+ +S+S
Sbjct: 98  FPTIAPSRFGTLTSFPNSSNDSTRTKVAVFLGKLHN-SSLLADSIVQSLVFAISSCTSVS 156

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
                  ++  +I+     +G +   LV MY + G  + A ++F+ +  +DL+ W S++ 
Sbjct: 157 YCSA---IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLM- 212

Query: 537 ANGLHGRGKVA--IDLFYKMEAES-FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
            +GL GRG +   ++ F +M  ES   P+ +T L+++ AC+  G ++EGK    ++    
Sbjct: 213 -SGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVV-VKL 270

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
            +    +    L+++ G+   L+ A Q    M + 
Sbjct: 271 GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR 305


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 269/794 (33%), Positives = 449/794 (56%), Gaps = 21/794 (2%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK--CYDFRKA 112
           S+DAF     +++CA L      A +HG + +     + F+ N+L+A Y +    D  +A
Sbjct: 11  SLDAFYLH-HLRSCASLPQ---AAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQA 66

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACE 171
           R+L D M  + + V +N +I AYS +GQ  E+L  F    R   V  + +T+ AAL AC 
Sbjct: 67  RRLLDEM-PRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACS 125

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            +     G  +HA  V  G    V+V+N+L++MYARCG M EA  V    E +D VSWNS
Sbjct: 126 RAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNS 185

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA-SGRLGNLLNGKE-LHAYAIK 289
           +++G+++   + + ++ F  ++      +     + +   SG  G++    E +H   +K
Sbjct: 186 LVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVK 245

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL----- 344
            G  +DL + + ++DMYAK   ++    +F  +   + + +  +IAG  ++   +     
Sbjct: 246 AGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVV 305

Query: 345 -KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAI 402
            +AL L+  +Q  G++       SV+ AC+    +   K+IHG +++     D  I +A+
Sbjct: 306 REALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSAL 365

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +D+Y     ++     F S+  +DVV+WT+MIS  V N L   AL LF+ +    ++ D 
Sbjct: 366 IDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDP 425

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
            T+ S ++A +SL++++ G+++  F  + GF+   ++ +S + MYAR G ++ A + F  
Sbjct: 426 FTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQE 485

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +++ D++ W+++I+++  HG  + A+  F +M      P+ ITFL +L ACSH GL++EG
Sbjct: 486 MESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEG 545

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
            ++ EIM+ +Y L P  +H  C+VDLLGRA  L +A  F+R         VW +LLG+CR
Sbjct: 546 LRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCR 605

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
           +H + E G++VA +++EL P + G YV + N++  + +     ++R  M+  G+KK PG 
Sbjct: 606 IHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGL 665

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQ 762
           SWIE+ + IHSF+A DKSH E + IY KLAE+  K+++           +  VE   + Q
Sbjct: 666 SWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKIDK---LTTTDTSCIEWVETTGREQ 722

Query: 763 -MLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             +  HSE+LA+A G++   + + IR+ KNLRVC DCHS  KL+S+   RE+++RD  RF
Sbjct: 723 NWMNCHSEKLAVALGIIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSECREIILRDVIRF 782

Query: 822 HHFEAGVCSCGDYW 835
           HHF  G CSCGDYW
Sbjct: 783 HHFRDGSCSCGDYW 796



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 293/569 (51%), Gaps = 18/569 (3%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY-SRMRVLGISVDAFTFPCV 64
           G    A +L D++ +R   ++N ++ AY   G+    LET+    R   +  D FT+   
Sbjct: 61  GDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAA 120

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           + AC+    L  G  +H L +  G     F+ NSLV+MYA+C D  +AR++FD   E++D
Sbjct: 121 LAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDD 180

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE--DSSFETLGMEI 182
           V  WNS++S Y   G   E L +F  M+R  +  N++   + ++ C   D S   +   +
Sbjct: 181 VS-WNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAV 239

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF------ 236
           H   VK+G +  +++A+A++ MYA+ G ++EA  +   + + + V +N+M+ G       
Sbjct: 240 HGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAA 299

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           V  ++  +A+  + ELQ  G +P +    + + A    G++  GK++H   +K  F  D 
Sbjct: 300 VHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDD 359

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            IG+ L+D+Y    C+    R F  +  QD ++WT +I+G  QN    +AL LF  +   
Sbjct: 360 FIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGV 419

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYS 415
           GL  D   I SV+ AC+ L  +   +++  +  + G      + N+ + +Y + GN++ +
Sbjct: 420 GLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAA 479

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
              F+ +ES DVVSW+++ISS+  +G A +AL+ F  M  A V  + IT +  L+A S  
Sbjct: 480 IQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHG 539

Query: 476 SILKKGKELNGFIIRKGFNLEGSV--ASSLVDMYARCGAL-DIANKVFNCVQTKDLILWT 532
            ++ +G      I++  + L  +V   + +VD+  R G L D    + + +   + ++W 
Sbjct: 540 GLVDEGLRYYE-IMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQ 598

Query: 533 SMINANGLHG---RGKVAIDLFYKMEAES 558
           S++ +  +H    RG++  D   +++  S
Sbjct: 599 SLLGSCRIHRDMERGQLVADRIMELQPAS 627



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 228/459 (49%), Gaps = 36/459 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG + +A ++FD   +R   +WN+++  Y+  G    +L  ++ MR   + +++F 
Sbjct: 158 MYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFA 217

Query: 61  FPCVIKACAMLKDLDCG--AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              VIK C+       G    +HG V+K G D+  F+ +++V MYAK     +A  LF  
Sbjct: 218 LGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKS 277

Query: 119 MGEKEDVVLWNSIISAYSASGQCL------EALGLFREMQRVGLVTNAYTFVAALQACED 172
           + +  +VV++N++I+        +      EAL L+ E+Q  G+    +TF + ++AC  
Sbjct: 278 VLDP-NVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNL 336

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
           +     G +IH   +K       ++ +ALI +Y     M +       +  +D V+W +M
Sbjct: 337 AGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAM 396

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           ++G VQN+L+ +A+  F EL G G KPD     + ++A   L  +  G+++  +A K GF
Sbjct: 397 ISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGF 456

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-R 351
                +GN+ + MYA+   V    + F +M + D +SW+ II+ +AQ+ C  +AL+ F  
Sbjct: 457 DRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNE 516

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL------------ 399
            V  + +  ++  +G VL ACS           HG ++ +GL    I+            
Sbjct: 517 MVGAKVVPNEITFLG-VLTACS-----------HGGLVDEGLRYYEIMKMEYGLCPTVKH 564

Query: 400 -NAIVDVYGKCGNI-DYSRNVFESIESKDVVSWTSMISS 436
              +VD+ G+ G + D    + +SI   + V W S++ S
Sbjct: 565 CTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGS 603


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/758 (33%), Positives = 410/758 (54%), Gaps = 4/758 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G    A  LF  +    V +WNA+L  Y   G     +     M   G++ D  T 
Sbjct: 80  YAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTL 139

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++KAC  L+DL  G +IH + +K G +      ++LV MY KC     A + F  MGE
Sbjct: 140 AVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGE 199

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           +  V  W + I+    + Q    L LF +MQR+GL  +   + +  ++C   +  +   +
Sbjct: 200 RNSVS-WGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQ 258

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  +K+  +    V  A++ +YA+   + +A    + L N    + N+M+ G V+  L
Sbjct: 259 LHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGL 318

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+Q F+ +  +G   D V      SA   +   L G ++H  AIK GF  D+ + N 
Sbjct: 319 GAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNA 378

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++D+Y KC  +     VF +M  +D +SW  IIA   QN C+   +     +   G++ D
Sbjct: 379 ILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPD 438

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
               GSVL AC+GL+ +     +HG  I+ GL  D  + + +VD+Y KCG I  ++ + +
Sbjct: 439 DFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHD 498

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            I  +++VSW S+IS +  N  + EA + F  M +  V+ D  T  + L   ++L+ ++ 
Sbjct: 499 RIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIEL 558

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++G II++    +  ++S+LVDMYA+CG +  +  +F   Q  D + W +MI    L
Sbjct: 559 GKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYAL 618

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG+G  A+++F +M+  +  P+H TF+A+L ACSH GL+++G ++  +M   Y+L+P  E
Sbjct: 619 HGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLE 678

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           H+AC+VD+LGR+   +EA +F+RSM +E  A +W  LL  C++  + E+ E  A  +L L
Sbjct: 679 HFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRL 738

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP +   Y+L+SNV+A S KW DV + R  MR   LKK PG SWIE+ +++H F+A DK 
Sbjct: 739 DPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKV 798

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
           H  S E+Y+ L  +  +++  G   A   F    V+EE
Sbjct: 799 HPRSREVYEMLNNLIVEMKLSGYEPASALFA--EVDEE 834



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 267/543 (49%), Gaps = 31/543 (5%)

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE---------- 123
           L  G   H  +L  G+  T F+ N L+ MYA+C     AR +FD M  ++          
Sbjct: 20  LATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTA 79

Query: 124 --------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTF 163
                               DVV WN+++S Y   G   +++GL  EM R G+  +  T 
Sbjct: 80  YAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTL 139

Query: 164 VAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN 223
              L+AC       LG++IHA  VK+G  + V   +AL+ MY +C  + +A    + +  
Sbjct: 140 AVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGE 199

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           ++SVSW + + G VQN+ Y + ++ F ++Q  G    Q    +   +   +  L   ++L
Sbjct: 200 RNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQL 259

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           HA+AIK  F +D  +G  ++D+YAK   +    R F+ +      +   ++ G  +    
Sbjct: 260 HAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLG 319

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAI 402
            +AL+LF+ +   G+  DV+ +  V  AC+ +K   Q  ++H   I+ G   D+ + NAI
Sbjct: 320 AEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAI 379

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +D+YGKC  +  +  VF+ +E +D VSW ++I++   N    + +     M    +E D 
Sbjct: 380 LDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDD 439

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
            T  S L A + L  L+ G  ++G  I+ G  L+  V+S++VDMY +CG +  A K+ + 
Sbjct: 440 FTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDR 499

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +  ++L+ W S+I+   L+ + + A   F +M      PDH T+  +L  C++   I  G
Sbjct: 500 IGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELG 559

Query: 583 KKF 585
           K+ 
Sbjct: 560 KQI 562



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 274/540 (50%), Gaps = 6/540 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC S+ DA + F  + +R   +W A +   V N +  R LE + +M+ LG+ V    
Sbjct: 180 MYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPA 239

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V ++CA +  L    ++H   +K  + +   +  ++V +YAK      AR+ F  + 
Sbjct: 240 YASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSL- 298

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
               V   N+++     +G   EAL LF+ M R G+  +  +      AC +      G+
Sbjct: 299 PNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGL 358

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +KSG ++ V V NA++ +Y +C  + EA  V  ++E +DSVSWN+++    QN+
Sbjct: 359 QVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNE 418

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            Y   + +  E+   G +PD     + + A   L +L  G  +H  AIK G   D  + +
Sbjct: 419 CYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSS 478

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           T++DMY KC  +    ++  ++  Q+ +SW +II+G++ N    +A + F  +   G+  
Sbjct: 479 TVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKP 538

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     +VL  C+ L  +   K+IHG II++  L D  I + +VD+Y KCGN+  S  +F
Sbjct: 539 DHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMF 598

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E  +  D VSW +MI  Y  +G   EALE+F  M +ANV  +  T V+ L A S + +L 
Sbjct: 599 EKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLD 658

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
            G     +++   + LE  +   + +VD+  R      A K    +  + D ++W ++++
Sbjct: 659 DGCRYF-YLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLS 717



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 217/447 (48%), Gaps = 34/447 (7%)

Query: 162 TFVAALQACEDSSFETL--GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
           TF    Q C  +    L  G   HA  + SG     +V+N L+ MYARCG    A GV  
Sbjct: 4   TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63

Query: 220 QLENKDSVSWNSMLT-------------------------------GFVQNDLYCKAMQF 248
            + ++D+VSWN+MLT                               G+ Q  ++  ++  
Sbjct: 64  VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
             E+   G  PD+      + A G L +L  G ++HA A+K G   D++ G+ L+DMY K
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  +    R F+ M  ++ +SW   IAG  QN  + + LELF  +Q  GL        SV
Sbjct: 184 CRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASV 243

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
             +C+ + C+S  +++H + I+   S D V+  AIVDVY K  ++  +R  F S+ +  V
Sbjct: 244 FRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTV 303

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
            +  +M+   V  GL  EAL+LF  M  + +  D ++L    SA + +    +G +++  
Sbjct: 304 QACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCL 363

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
            I+ GF+++  V ++++D+Y +C AL  A  VF  ++ +D + W ++I A   +   +  
Sbjct: 364 AIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDT 423

Query: 548 IDLFYKMEAESFAPDHITFLALLYACS 574
           I    +M      PD  T+ ++L AC+
Sbjct: 424 IAYLNEMLRYGMEPDDFTYGSVLKACA 450


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/777 (33%), Positives = 435/777 (55%), Gaps = 34/777 (4%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV--DAFTFPCVIKAC 68
           A QLFD + + +   WN ++   V N  P   L  YS M+     V  D++T+  V+KAC
Sbjct: 47  ARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKAC 106

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK-------------ARQL 115
           A  ++L  G  +H   L+C  + +  + NSL+ MY+ C                   R++
Sbjct: 107 ADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKV 166

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M  K  VV WN++I+ Y  + +  EA+  F  M ++G+  +  +FV    A     F
Sbjct: 167 FDTM-RKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPA-----F 220

Query: 176 ETLG-----MEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
            +LG       +H   VK G      +YV ++ I MYA  G +  A  V      +++  
Sbjct: 221 SSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEV 280

Query: 229 WNSMLTGFVQNDLYCKAMQ-FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           WN+M++ FVQN+   + +Q FF+ ++      D+V  ++A+SA+  L      ++LHA+ 
Sbjct: 281 WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFV 340

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           IK   V+ + + N L+ MY++C  ++   ++F  M  +D +SW T+I+ + QN  + +AL
Sbjct: 341 IKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 400

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYG 407
            LF  ++ + L  D + + ++L A S L+     K+ HGY++R G+    + + ++D+Y 
Sbjct: 401 MLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYA 460

Query: 408 KCGNIDYSRNVFESIES--KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           K G I+ ++NVFE   S  +D  +W SM+S Y  NGL ++A  +   M +  V  + +TL
Sbjct: 461 KSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTL 520

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S L A +    +  GK+L+GF IR   +    VA++L+DMY++ G++  A  VF+    
Sbjct: 521 ASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANE 580

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           K ++ +++MI   G HG G+ A+ +F++M+     PD +T +A+L ACS++GL++EG + 
Sbjct: 581 KSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQI 640

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM-QIEPTAEVWCALLGACRVH 644
            E MR  Y + P  EH+ C+ D+LGRA  +++AY+FV  + +     E+W +LL ACR+H
Sbjct: 641 FESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIH 700

Query: 645 SNKELGEIVAKKLLELDP--GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
              ELG++VAKKLLE++   G  G +VL+SN++A  R W++V+ VR +MR  GLKK  GS
Sbjct: 701 KQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGS 760

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           SWIEI   ++ F ++D+ H +SD+IY  L E+  +++  G     T ++   +E +E
Sbjct: 761 SWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYRPLSTSYLGGFLEPDE 817



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 213/423 (50%), Gaps = 17/423 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAF 59
           MY + G +  A+++FD   +R    WN M+ A+V N   L  ++ + + +     ++D  
Sbjct: 256 MYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEV 315

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T    I A + L+  +   ++H  V+K    +   ++N+L+AMY++C     + ++FD M
Sbjct: 316 TLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNM 375

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK DVV WN++ISA+  +G   EAL LF EM++  L+ ++ T  A L A  D     +G
Sbjct: 376 PEK-DVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIG 434

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ--LENKDSVSWNSMLTGFV 237
            + H   +++G   +  + + LI MYA+ G +  A  V  +     +D  +WNSM++G+ 
Sbjct: 435 KQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYT 493

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN L  +A    R++      P+ V   + + A    G +  GK+LH ++I+     ++ 
Sbjct: 494 QNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVF 553

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +   L+DMY+K   + +   VF +   +  ++++T+I GY Q+     AL +F  +Q  G
Sbjct: 554 VATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSG 613

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
           +  D + + +VL ACS       GL+     + +  Y I+           + D+ G+ G
Sbjct: 614 IQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTV--YNIQPSTEHFC---CVADMLGRAG 668

Query: 411 NID 413
            +D
Sbjct: 669 RVD 671



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 166/331 (50%), Gaps = 14/331 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +C S+  + ++FD + ++ V +WN M+ A+V NG     L  +  M+   + VD+ T
Sbjct: 358 MYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVT 417

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++ A + L++ D G + HG +L+ G  ++  D   + L+ MYAK      A+ +F++
Sbjct: 418 VTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD---SYLIDMYAKSGLIEAAQNVFEK 474

Query: 119 -MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
               + D   WNS++S Y+ +G   +A  + R+M    ++ N  T  + L AC  S +  
Sbjct: 475 SFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYID 534

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G ++H  ++++  +  V+VA ALI MY++ G +  A  V  +   K  V++++M+ G+ 
Sbjct: 535 WGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYG 594

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q+ +   A+  F  +Q +G +PD V  V  +SA    G +  G ++        F S   
Sbjct: 595 QHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQI--------FESMRT 646

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           + N        CC  + +GR      A +F+
Sbjct: 647 VYNIQPSTEHFCCVADMLGRAGRVDKAYEFV 677



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 15/183 (8%)

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN--VESDSITLVS 467
           G +  +R +F+++     V W ++I   V N   +EAL  +  M  ++  V+ DS T  S
Sbjct: 42  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 101

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL-------------D 514
            L A +    L  GK ++   +R   N    V +SL++MY+ C +              D
Sbjct: 102 VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 161

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +  KVF+ ++ + ++ W ++I       R   A+  F  M      P  ++F+ +  A S
Sbjct: 162 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 221

Query: 575 HSG 577
             G
Sbjct: 222 SLG 224


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 224/557 (40%), Positives = 361/557 (64%), Gaps = 3/557 (0%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           + LH   IK    +   IG+ L+  Y +  C      +F ++  +D +SW ++I+G+++ 
Sbjct: 58  RALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRR 117

Query: 341 NCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVI 398
                 L L   ++ E GL  + + +  V+ AC+G+  +   K IHG  ++ G L ++ +
Sbjct: 118 ADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKV 177

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
           +N+++++YGKCG ++ +  +FE +  + +VSW SM++ +VH GLA + +  F +M  A +
Sbjct: 178 VNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGI 237

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
            SD  T+VS L A  +L + K  + ++G+I+  G +   ++A++L+D+YA+ G L  + K
Sbjct: 238 NSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCK 297

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           VF  +   D + WT+M+++  +HGRG+ AI+ F  M  E   PDH+TF  LL ACSHSGL
Sbjct: 298 VFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGL 357

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           + EGK + +IM   Y ++   EHY+C+VDLLGR+ HL +AY+ ++SM +EP + VW AL+
Sbjct: 358 VEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALI 417

Query: 639 GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
           GACRV  N ELG+ VA++L  LDP +  NY+ +SN+++A+ +W+D  +VR  M+   L +
Sbjct: 418 GACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIR 477

Query: 699 TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
            PG S+IE GNKIH F+  D+SH ++++IY KL E+  K  RE G+ ++T++VLH+V+EE
Sbjct: 478 NPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRK-NREVGFASKTEYVLHDVDEE 536

Query: 759 EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
            K  ++  HSE+LAIA+G+L +  G  + ITKN+R+C DCH F KL+S +  R +++RD 
Sbjct: 537 VKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRDT 596

Query: 819 NRFHHFEAGVCSCGDYW 835
            RFHHF  G+CSCGDYW
Sbjct: 597 KRFHHFTNGLCSCGDYW 613



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 196/405 (48%), Gaps = 19/405 (4%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +H  V+K    +  FI + LV+ Y +    + A +LFD + +K D+V WNS+IS +S   
Sbjct: 60  LHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDK-DLVSWNSLISGFSRRA 118

Query: 140 QCLEALGL-FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
                LGL FR    +GL  N  T +  + AC       +G  IH   VKSG  L+V V 
Sbjct: 119 DLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVV 178

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N+LI +Y +CG +  A  +   +  +  VSWNSM+   V   L  K + +F  ++ AG  
Sbjct: 179 NSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGIN 238

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
            DQ   V+ + A   LG     + +H Y +  G   +L I   L+D+YAK   ++   +V
Sbjct: 239 SDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKV 298

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F  M   D ++WT +++ YA +    +A+E F  +  EG+  D +    +L ACS    +
Sbjct: 299 FGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLV 358

Query: 379 SQTK-------EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSW 430
            + K       E +G  +R     +   + +VD+ G+ G+++ +  + +S+    +   W
Sbjct: 359 EEGKNYFKIMYEFYGVELR-----VEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVW 413

Query: 431 TSMISSYVHNG---LANEALELFYLMNEANVESDSITLVSALSAA 472
            ++I +    G   L  E  E  + ++ ++   + ITL +  SAA
Sbjct: 414 GALIGACRVRGNIELGKEVAERLFSLDPSD-SRNYITLSNMYSAA 457



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 145/281 (51%), Gaps = 2/281 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAFT 60
           Y + G   DA +LFD++  + + +WN+++  +    +    L    RMR  +G+  +  T
Sbjct: 83  YVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVT 142

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA + +LD G  IHG+ +K G      +VNSL+ +Y KC     A  LF+ M 
Sbjct: 143 VIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGM- 201

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             + +V WNS+++ +   G   + +G F  M+R G+ ++  T V+ L ACE+     L  
Sbjct: 202 SVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAE 261

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   +  G +  + +A AL+ +YA+ G ++++  V   + N D+V+W +ML+ +  + 
Sbjct: 262 AVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHG 321

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
              +A++ F  +   G  PD V   + +SA    G +  GK
Sbjct: 322 RGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGK 362



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 112/235 (47%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGKCG +  A  LF+ +S +++ +WN+M+  +V  G   + +  +  MR  GI+ D  T
Sbjct: 184 LYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQAT 243

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ AC  L        +HG +L  G D    I  +L+ +YAK      + ++F  M 
Sbjct: 244 VVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGM- 302

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V W +++S+Y+  G+  EA+  F  M R G+V +  TF   L AC  S     G 
Sbjct: 303 INPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGK 362

Query: 181 EIHAATVK-SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
                  +  G  L+V   + ++ +  R G + +A  ++  +    +S  W +++
Sbjct: 363 NYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALI 417



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 6/147 (4%)

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           ++N  A++    F+    +NV+S    L++A+S  SS+S  +    L+  +I+      G
Sbjct: 19  LYNSFASQLSPTFHAF--SNVDSLVSALITAISTCSSISYCRA---LHCRVIKSVNYNHG 73

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            +   LV  Y   G    A ++F+ +  KDL+ W S+I+         + + L ++M  E
Sbjct: 74  FIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFE 133

Query: 558 -SFAPDHITFLALLYACSHSGLINEGK 583
               P+ +T + ++ AC+  G ++ GK
Sbjct: 134 MGLKPNEVTVIPVVSACAGVGELDVGK 160


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/559 (41%), Positives = 354/559 (63%), Gaps = 7/559 (1%)

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           N +E+HA   K     D  IG+ L+  Y K        ++F  M  +D +SW ++I+G++
Sbjct: 57  NCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFS 116

Query: 339 QNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
           +  C   +L  F T++ E  +  + + I S++ AC+G   +   K IHG+ I+ G + ++
Sbjct: 117 R--CLHMSLTAFYTMKFEMSVKPNEVTILSMISACNG--ALDAGKYIHGFGIKVGGTLEV 172

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            + N+++++YGK G++  +  +FE+I   + VSW S+I++ V NG A E ++ F  M   
Sbjct: 173 KVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRL 232

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +E D  T+++ L A   L + K  + ++G +   GF  + ++A++L+D YA+ G L  +
Sbjct: 233 GIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSAS 292

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             VF  V   D + WT+M+     HG G+ AI LF  M  +   PDH+TF  LL ACSHS
Sbjct: 293 YGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHS 352

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           GL+NEGK +  +M   Y ++P  +HY+C+VDLLGR   L +AY+ +++M +EP A VW A
Sbjct: 353 GLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGA 412

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LLGACRVH N ELG+ VA+ L+ ++P +P NY+++SN+++ASR WKD  +VR  ++  GL
Sbjct: 413 LLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGL 472

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           K+TPG S IE GNK H F   D+SH E+++IY KL E+  K+ R+ GY ++T++VL +VE
Sbjct: 473 KRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKI-RKAGYSSKTEYVLQDVE 531

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EE K  M+  HSE+LAIA+G+L S EG  + ITKNLR+C DCHS  KL+S +  R +++R
Sbjct: 532 EEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIR 591

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D  RFHHF  G CSC DYW
Sbjct: 592 DPKRFHHFSDGFCSCADYW 610



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 202/408 (49%), Gaps = 26/408 (6%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           +IH  V K       FI + LV  Y K      A +LFD M  K D+V WNS+IS +S  
Sbjct: 60  EIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHK-DLVSWNSLISGFS-- 116

Query: 139 GQCLE-ALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +CL  +L  F  M+  + +  N  T ++ + AC  +     G  IH   +K G  L+V 
Sbjct: 117 -RCLHMSLTAFYTMKFEMSVKPNEVTILSMISACNGAL--DAGKYIHGFGIKVGGTLEVK 173

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           VAN+LI MY + G +T A  +   + + ++VSWNS++   V N    + + +F +++  G
Sbjct: 174 VANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLG 233

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            + D+   +  + A   LG     + +H      GF + + I   L+D YAK   ++   
Sbjct: 234 IEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASY 293

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            VF ++   D ++WT ++AGYA +    +A++LF ++  +GL+ D +    +L ACS   
Sbjct: 294 GVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSG 353

Query: 377 CMSQTK-------EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVV 428
            +++ K       E++G   R     +   + +VD+ G+CG ++ +  V +++    +  
Sbjct: 354 LVNEGKSYFNVMSEVYGIEPR-----VDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAG 408

Query: 429 SWTSMISS-YVHNG--LANEALELFYLMNEANVESDSITLVSALSAAS 473
            W +++ +  VH    L  E  E  +L+N   ++  +  ++S + +AS
Sbjct: 409 VWGALLGACRVHGNIELGKEVAE--HLINMEPLDPRNYIMLSNMYSAS 454



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 5/325 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G   DA +LFD +  + + +WN+++  + S    + +   Y+    + +  +  T 
Sbjct: 84  YNKLGYAEDALKLFDDMPHKDLVSWNSLISGF-SRCLHMSLTAFYTMKFEMSVKPNEVTI 142

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             +I AC     LD G  IHG  +K G      + NSL+ MY K  D   A +LF+ + +
Sbjct: 143 LSMISACN--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPD 200

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             + V WNSII+A   +G   E +  F +M+R+G+  +  T +A LQAC       L   
Sbjct: 201 P-NTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAES 259

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH     +G   ++ +A AL+  YA+ G+++ + GV  ++   D V+W +ML G+  + L
Sbjct: 260 IHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGL 319

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIGN 300
             +A++ F  +   G +PD V   + +SA    G +  GK   +  +   G    +   +
Sbjct: 320 GREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYS 379

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQ 325
            ++D+  +C  +N    V   M  +
Sbjct: 380 CMVDLLGRCGLLNDAYEVIQNMPME 404



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGK G +  A +LF+ +      +WN+++ A V+NG     ++ +++MR LGI  D  T
Sbjct: 181 MYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGT 240

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +++AC  L        IHGL+   G+ +   I  +L+  YAK      +  +F  +G
Sbjct: 241 ILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVG 300

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V W ++++ Y+A G   EA+ LF  M   GL  +  TF   L AC  S     G 
Sbjct: 301 FA-DRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGK 359

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
              +  +   G   +V   + ++ +  RCG + +A  V+  +  + +   W ++L
Sbjct: 360 SYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALL 414



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 10/123 (8%)

Query: 465 LVSAL-SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           +VSAL  A +S   +   +E++  + +     +G +   LV  Y + G  + A K+F+ +
Sbjct: 41  IVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDM 100

Query: 524 QTKDLILWTSMIN--ANGLHGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACSHSGLIN 580
             KDL+ W S+I+  +  LH    +++  FY M+ E S  P+ +T L+++ AC  +G ++
Sbjct: 101 PHKDLVSWNSLISGFSRCLH----MSLTAFYTMKFEMSVKPNEVTILSMISAC--NGALD 154

Query: 581 EGK 583
            GK
Sbjct: 155 AGK 157


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/728 (34%), Positives = 414/728 (56%), Gaps = 4/728 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAFT 60
           Y K     DA++LFD +  R + TW++M+  Y  +G  +  L  + R MR      + + 
Sbjct: 97  YSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYI 156

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++AC  L +L    ++HG V+K G+    ++  SL+  YAK     +AR +FD + 
Sbjct: 157 LASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLK 216

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  V  W +II+ Y+  G+   +L LF +M+   +  + Y   + L AC    F   G 
Sbjct: 217 VKTTVT-WTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGK 275

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   ++ G ++ V V N +I  Y +C K+     +  +L +KD VSW +M+ G +QN 
Sbjct: 276 QIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNS 335

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  AM  F E+   G KPD     + +++ G L  L  G+++HAYAIK    +D  + N
Sbjct: 336 FHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKN 395

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  +    +VF  + A + +S+  +I GY++ +  ++AL+LFR ++L     
Sbjct: 396 GLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPP 455

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
            ++   S+L   S L  +  + +IH  II+ G+S D    +A++DVY KC  +  +R VF
Sbjct: 456 TLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVF 515

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E I  +D+V W +M S Y       E+L+L+  +  + ++ +  T  + ++AAS+++ L+
Sbjct: 516 EEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLR 575

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G++ +  +I+ G + +  V +SLVDMYA+CG+++ ++K F+    +D+  W SMI+   
Sbjct: 576 HGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYA 635

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG    A+++F +M  E   P+++TF+ LL ACSH+GL++ G    E M   + ++P  
Sbjct: 636 QHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESM-SKFGIEPGI 694

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           +HYAC+V LLGRA  + EA +FV+ M I+P A VW +LL ACRV  + ELG   A+  + 
Sbjct: 695 DHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAIS 754

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            DP + G+Y+L+SN+FA+   W  V  VR +M  S + K PG SWIE+ N++H FIARD 
Sbjct: 755 CDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHRFIARDT 814

Query: 720 SHSESDEI 727
           +H +S  I
Sbjct: 815 AHRDSTLI 822



 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 168/604 (27%), Positives = 318/604 (52%), Gaps = 12/604 (1%)

Query: 79  KIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           KIH  ++  G+   D F+VN+L+  Y+K      A++LFD M  + ++V W+S++S Y+ 
Sbjct: 72  KIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHR-NLVTWSSMVSMYTQ 130

Query: 138 SGQCLEALGLF-REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            G  +EAL LF R M+      N Y   + ++AC      +  +++H   VK G    VY
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V  +LI  YA+ G + EA  +   L+ K +V+W +++ G+ +      +++ F +++   
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGD 250

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             PD+    + +SA   L  L  GK++H Y +++GF  D+ + N ++D Y KC  V    
Sbjct: 251 VYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGR 310

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           ++F ++  +D +SWTT+IAG  QN+ H  A++LF  +  +G   D     SVL +C  L+
Sbjct: 311 KLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQ 370

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            + + +++H Y I+  + +D  + N ++D+Y KC ++  +R VF+ + + +VVS+ +MI 
Sbjct: 371 ALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIE 430

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y       EAL+LF  M  +      +T VS L  +SSL +L+   +++  II+ G +L
Sbjct: 431 GYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSL 490

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +    S+L+D+Y++C  +  A  VF  +  +D+++W +M +        + ++ L+  ++
Sbjct: 491 DSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQ 550

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANH 614
                P+  TF A++ A S+   +  G++F  ++++     DP+  +   LVD+  +   
Sbjct: 551 MSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTN--SLVDMYAKCGS 608

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG-EIVAKKLLELDPGNPGNYVLISN 673
           +EE+++   S      A  W +++     H +     E+  + ++E   G   NYV    
Sbjct: 609 IEESHKAFSSTNQRDIA-CWNSMISTYAQHGDAAKALEVFERMIME---GVKPNYVTFVG 664

Query: 674 VFAA 677
           + +A
Sbjct: 665 LLSA 668



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 209/381 (54%), Gaps = 32/381 (8%)

Query: 219 YQLENKDSVS----WNSMLTGFVQNDLYCKAMQ--FFRELQGAGQKPDQVCTVNAVSASG 272
           ++  NKD+VS    ++++L  F+Q       +Q    REL    Q P             
Sbjct: 14  FKFLNKDNVSQTLHFSTLLPPFLQPHDSPILIQRKIGRELGKLLQLPSP----------- 62

Query: 273 RLGNLLNG---KELHAYAIKQGF-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
              N+L     K++HA+ +  GF   D+ + NTL+  Y+K    +   ++F  M  ++ +
Sbjct: 63  ---NILTSHYYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLV 119

Query: 329 SWTTIIAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +W+++++ Y Q+   ++AL LF R ++      +  I+ SV+ AC+ L  +SQ  ++HG+
Sbjct: 120 TWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGF 179

Query: 388 IIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           +++ G + D+ +  +++D Y K G +D +R +F+ ++ K  V+WT++I+ Y   G +  +
Sbjct: 180 VVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVS 239

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L+LF  M E +V  D   + S LSA S L  L+ GK+++G+++R+GF+++ SV + ++D 
Sbjct: 240 LKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDF 299

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINA---NGLHGRGKVAIDLFYKMEAESFAPDH 563
           Y +C  +    K+FN +  KD++ WT+MI     N  HG    A+DLF +M  + + PD 
Sbjct: 300 YLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGD---AMDLFVEMVRKGWKPDA 356

Query: 564 ITFLALLYACSHSGLINEGKK 584
               ++L +C     + +G++
Sbjct: 357 FGCTSVLNSCGSLQALQKGRQ 377



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 169/337 (50%), Gaps = 18/337 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC S+ +A ++FD V+   V ++NAM+  Y    + +  L+ +  MR+        T
Sbjct: 400 MYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLT 459

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++   + L  L+  ++IH L++K G     F  ++L+ +Y+KC     AR +F+ + 
Sbjct: 460 FVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIY 519

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ D+V+WN++ S YS   +  E+L L++++Q   L  N +TF A + A  + +    G 
Sbjct: 520 DR-DIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQ 578

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   +K G +   +V N+L+ MYA+CG + E+         +D   WNSM++ + Q+ 
Sbjct: 579 QFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHG 638

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG----KELHAYAIKQGFVSDL 296
              KA++ F  +   G KP+ V  V  +SA    G L  G    + +  + I+ G     
Sbjct: 639 DAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEPG----- 693

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
                 +D YA  C V+ +GR      A++F+    I
Sbjct: 694 ------IDHYA--CMVSLLGRAGKIYEAKEFVKKMPI 722



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 2/236 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  V DA  +F+++  R +  WNAM   Y    E    L+ Y  +++  +  + FT
Sbjct: 501 VYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFT 560

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VI A + +  L  G + H  V+K G D   F+ NSLV MYAKC    ++ + F    
Sbjct: 561 FAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTN 620

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ D+  WNS+IS Y+  G   +AL +F  M   G+  N  TFV  L AC  +    LG 
Sbjct: 621 QR-DIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGF 679

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD-SVSWNSMLTG 235
               +  K G    +     ++++  R GK+ EA   + ++  K  +V W S+L+ 
Sbjct: 680 HHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSA 735


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 223/560 (39%), Positives = 350/560 (62%), Gaps = 2/560 (0%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           LL GK  HA  +  G  +DL   N L++MY+KC  V++  +VF +M ++  +SW T+I  
Sbjct: 80  LLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGS 139

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-D 395
             QN    +AL+L   +Q EG       I SVL AC+    +S+ + +H + I+  +  +
Sbjct: 140 LTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLN 199

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + +  A++DVY KCG +  +  VFES+  + VV+W+SM + YV N +  +AL LF    E
Sbjct: 200 VFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWE 259

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
             ++ D   + S + A + L+ + +GK++N  + + GF     VASSL+DMYA+CG ++ 
Sbjct: 260 TGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEE 319

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           + KVF  V+ ++++LW +MI+    H R    + LF KM+    +P+ +TF+++L AC H
Sbjct: 320 SYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
            GL+ +G+K+ ++M  ++ L P   HY+C+VD L RA  + EAY  +  +    +A +W 
Sbjct: 380 MGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           +LL +CR H N EL E+ AKKL +++P N GNY+L+SN++AA+ KW +V ++R  ++ S 
Sbjct: 440 SLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESD 499

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           +KK  G SWIEI +K+H F+  +++H +  EIY KL E+ ++L++  GY  +TQ  LH V
Sbjct: 500 VKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKL-GYKVETQHDLHQV 558

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
            E  K ++L  HSE+LA   G+L     + IRI KNLR+C DCHSF KL S+ F R+++V
Sbjct: 559 GESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIV 618

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD NRFHHF+ G CSCGD+W
Sbjct: 619 RDTNRFHHFKNGCCSCGDFW 638



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 201/381 (52%), Gaps = 4/381 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++K CA  K L  G   H  +L  G  +     N L+ MY+KC     ARQ+FD M  + 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR- 128

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            +V WN++I + + +G+  EAL L  +MQR G   + +T  + L AC      +    +H
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           A  +K+  +L V+VA AL+ +YA+CG M +A  V   + ++  V+W+SM  G+VQN++Y 
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+  FR+    G K DQ    + + A   L  ++ GK+++A   K GF S++ + ++L+
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLI 308

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMYAKC  +    +VF  +  ++ + W  +I+G +++   L+ + LF  +Q  GL  + +
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFES 421
              SVL AC  +  + + ++    + ++     ++   + +VD   + G I  + ++   
Sbjct: 369 TFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISK 428

Query: 422 IESKDVVS-WTSMISSYVHNG 441
           +      S W S+++S   +G
Sbjct: 429 LPFNASASMWGSLLASCRTHG 449



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 167/329 (50%), Gaps = 9/329 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV  A Q+FD++  R++ +WN M+G+   NGE    L+   +M+  G     FT
Sbjct: 108 MYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFT 167

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA    L     +H   +K   D   F+  +L+ +YAKC   + A  +F+ M 
Sbjct: 168 ISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP 227

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++  VV W+S+ + Y  +    +AL LFR+    GL  + +   + + AC   +    G 
Sbjct: 228 DR-SVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGK 286

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +++A   KSG    ++VA++LI MYA+CG + E+  V   +E ++ V WN+M++G  ++ 
Sbjct: 287 QMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHA 346

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              + M  F ++Q  G  P+ V  V+ +SA G +G +  G++      K+  ++      
Sbjct: 347 RSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAP----- 401

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
              +++   C V+ + R      A D IS
Sbjct: 402 ---NVFHYSCMVDTLSRAGQIFEAYDLIS 427



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 59/105 (56%)

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           +L +GK  +  I+  G   +   ++ L++MY++CG++D A +VF+ + ++ L+ W +MI 
Sbjct: 79  LLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIG 138

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
           +   +G    A+DL  +M+ E       T  ++L AC+    ++E
Sbjct: 139 SLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSE 183


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/777 (33%), Positives = 435/777 (55%), Gaps = 34/777 (4%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV--DAFTFPCVIKAC 68
           A QLFD + + +   WN ++   V N  P   L  YS M+     V  D++T+  V+KAC
Sbjct: 23  ARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKAC 82

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK-------------ARQL 115
           A  ++L  G  +H   L+C  + +  + NSL+ MY+ C                   R++
Sbjct: 83  ADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKV 142

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M  K  VV WN++I+ Y  + +  EA+  F  M ++G+  +  +FV    A     F
Sbjct: 143 FDTM-RKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPA-----F 196

Query: 176 ETLG-----MEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
            +LG       +H   VK G      +YV ++ I MYA  G +  A  V      +++  
Sbjct: 197 SSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEV 256

Query: 229 WNSMLTGFVQNDLYCKAMQ-FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           WN+M++ FVQN+   + +Q FF+ ++      D+V  ++A+SA+  L      ++LHA+ 
Sbjct: 257 WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFV 316

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           IK   V+ + + N L+ MY++C  ++   ++F  M  +D +SW T+I+ + QN  + +AL
Sbjct: 317 IKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 376

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYG 407
            LF  ++ + L  D + + ++L A S L+     K+ HGY++R G+    + + ++D+Y 
Sbjct: 377 MLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYA 436

Query: 408 KCGNIDYSRNVFESIES--KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           K G I+ ++NVFE   S  +D  +W SM+S Y  NGL ++A  +   M +  V  + +TL
Sbjct: 437 KSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTL 496

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S L A +    +  GK+L+GF IR   +    VA++L+DMY++ G++  A  VF+    
Sbjct: 497 ASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANE 556

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           K ++ +++MI   G HG G+ A+ +F++M+     PD +T +A+L ACS++GL++EG + 
Sbjct: 557 KSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQI 616

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM-QIEPTAEVWCALLGACRVH 644
            E MR  Y + P  EH+ C+ D+LGRA  +++AY+FV  + +     E+W +LL ACR+H
Sbjct: 617 FESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIH 676

Query: 645 SNKELGEIVAKKLLELDP--GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
              ELG++VAKKLLE++   G  G +VL+SN++A  R W++V+ VR +MR  GLKK  GS
Sbjct: 677 KQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGS 736

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           SWIEI   ++ F ++D+ H +SD+IY  L E+  +++  G     T ++   +E +E
Sbjct: 737 SWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYRPLSTSYLGGFLEPDE 793



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 213/423 (50%), Gaps = 17/423 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAF 59
           MY + G +  A+++FD   +R    WN M+ A+V N   L  ++ + + +     ++D  
Sbjct: 232 MYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEV 291

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T    I A + L+  +   ++H  V+K    +   ++N+L+AMY++C     + ++FD M
Sbjct: 292 TLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNM 351

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK DVV WN++ISA+  +G   EAL LF EM++  L+ ++ T  A L A  D     +G
Sbjct: 352 PEK-DVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIG 410

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ--LENKDSVSWNSMLTGFV 237
            + H   +++G   +  + + LI MYA+ G +  A  V  +     +D  +WNSM++G+ 
Sbjct: 411 KQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYT 469

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN L  +A    R++      P+ V   + + A    G +  GK+LH ++I+     ++ 
Sbjct: 470 QNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVF 529

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +   L+DMY+K   + +   VF +   +  ++++T+I GY Q+     AL +F  +Q  G
Sbjct: 530 VATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSG 589

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
           +  D + + +VL ACS       GL+     + +  Y I+           + D+ G+ G
Sbjct: 590 IQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTV--YNIQPSTEHFC---CVADMLGRAG 644

Query: 411 NID 413
            +D
Sbjct: 645 RVD 647



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 166/331 (50%), Gaps = 14/331 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +C S+  + ++FD + ++ V +WN M+ A+V NG     L  +  M+   + VD+ T
Sbjct: 334 MYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVT 393

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++ A + L++ D G + HG +L+ G  ++  D   + L+ MYAK      A+ +F++
Sbjct: 394 VTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD---SYLIDMYAKSGLIEAAQNVFEK 450

Query: 119 -MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
               + D   WNS++S Y+ +G   +A  + R+M    ++ N  T  + L AC  S +  
Sbjct: 451 SFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYID 510

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G ++H  ++++  +  V+VA ALI MY++ G +  A  V  +   K  V++++M+ G+ 
Sbjct: 511 WGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYG 570

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q+ +   A+  F  +Q +G +PD V  V  +SA    G +  G ++        F S   
Sbjct: 571 QHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQI--------FESMRT 622

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           + N        CC  + +GR      A +F+
Sbjct: 623 VYNIQPSTEHFCCVADMLGRAGRVDKAYEFV 653



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 15/183 (8%)

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN--VESDSITLVS 467
           G +  +R +F+++     V W ++I   V N   +EAL  +  M  ++  V+ DS T  S
Sbjct: 18  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL-------------D 514
            L A +    L  GK ++   +R   N    V +SL++MY+ C +              D
Sbjct: 78  VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +  KVF+ ++ + ++ W ++I       R   A+  F  M      P  ++F+ +  A S
Sbjct: 138 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 197

Query: 575 HSG 577
             G
Sbjct: 198 SLG 200


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/729 (33%), Positives = 408/729 (55%), Gaps = 23/729 (3%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV- 96
           E + + ETY + +V  + +D      V++ CA    +     +HGLVLK  ++  D +V 
Sbjct: 105 ESIGISETYQQTQVQDL-ID------VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVL 157

Query: 97  -NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            N    +Y+KC +FR A  +FD M ++ +V  W  +I   +  G   +    F EM   G
Sbjct: 158 FNHAAHVYSKCSEFRAACGVFDEMPQR-NVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSG 216

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           ++ + + + A +Q+C       LG  +HA  V  G    ++V+ +L+ MYA+ G + ++ 
Sbjct: 217 ILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSY 276

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            V   +   + VSWN+M++G   N L+ +A   F  ++     P+    V+   A G+L 
Sbjct: 277 WVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLV 336

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS------ 329
           ++  GKE+   A + G   ++ +G  L+DMY+KC  ++    VF      +FI+      
Sbjct: 337 DVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVF----DTNFINCGVNTP 392

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W  +I+GY+Q+ C  +ALEL+  +   G+ +D+    SV  A +  K +   + +HG ++
Sbjct: 393 WNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 452

Query: 390 RKGLSDLVIL--NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           + GL  +V+   NAI D Y KCG ++  R VF+ +E +D+VSWT+++++Y  + L  EAL
Sbjct: 453 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 512

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
             F LM E     +  T  S L + +SL  L+ G++++G + + G + E  + S+L+DMY
Sbjct: 513 ATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMY 572

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           A+CG++  A KVF+ +   D++ WT++I+    HG  + A+ LF +ME      + +T L
Sbjct: 573 AKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLL 632

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
            +L+ACSH G++ EG  + + M   Y + P  EHYAC++DLLGR   L++A +F+R M +
Sbjct: 633 CVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPM 692

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
           EP   VW  LLG CRVH N ELGEI A+K+L + P     YVL+SN +  +  ++D   +
Sbjct: 693 EPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSL 752

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           R  M+  G+KK PG SWI +  ++H F + D+ H +  EIY KL E+ EK+ +  GYV  
Sbjct: 753 RNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKI-KAMGYVPD 811

Query: 748 TQFVLHNVE 756
            ++VL+N +
Sbjct: 812 LRYVLNNAD 820



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 291/555 (52%), Gaps = 21/555 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC     A  +FD++ QR VF+W  M+     +G      + +  M   GI  D F 
Sbjct: 164 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 223

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +I++C  L  L+ G  +H  ++  G+ +  F+  SL+ MYAK      +  +F+ M 
Sbjct: 224 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 283

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E   V  WN++IS  +++G  LEA  LF  M+      N YT V+  +A        +G 
Sbjct: 284 EHNQVS-WNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGK 342

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ--LENKDSVSWNSMLTGFVQ 238
           E+     + G    V V  ALI MY++CG + +A  V     +    +  WN+M++G+ Q
Sbjct: 343 EVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 402

Query: 239 NDLYCKAMQFFRELQGAGQKPD--QVCTV-NAVSASGRLGNLLNGKELHAYAIKQGF-VS 294
           +    +A++ + ++   G   D    C+V NA++AS    +L  G+ +H   +K G  + 
Sbjct: 403 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAAS---KSLQFGRVVHGMVLKCGLDLM 459

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
            + + N + D Y+KC  +  + +VF +M  +D +SWTT++  Y+Q++   +AL  F  ++
Sbjct: 460 VVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMR 519

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
            EG   +     SVL++C+ L  +   +++HG + + GL ++  I +A++D+Y KCG+I 
Sbjct: 520 EEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSIT 579

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  VF+ I + D+VSWT++IS Y  +GL  +AL+LF  M  + ++++++TL+  L A S
Sbjct: 580 EAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS 639

Query: 474 SLSILKKG-----KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-D 527
              ++++G     +  +G+    G   E    + ++D+  R G LD A +    +  + +
Sbjct: 640 HGGMVEEGLFYFQQMEDGY----GVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPN 695

Query: 528 LILWTSMINANGLHG 542
            ++W +++    +HG
Sbjct: 696 EMVWQTLLGGCRVHG 710


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/565 (40%), Positives = 359/565 (63%), Gaps = 5/565 (0%)

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           L  L  GK +HA  +   F  DL + NTL+++YAKC  + Y  ++F +M+++D ++WT +
Sbjct: 28  LNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTAL 87

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS--QTKEIHGYIIRK 391
           I GY+Q++    AL L   +   GL  +   + S+L A SG+      Q +++HG  +R 
Sbjct: 88  ITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRY 147

Query: 392 GL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           G  S++ +  AI+D+Y +C +++ ++ +F+ + SK+ VSW ++I+ Y   G  ++A  LF
Sbjct: 148 GYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLF 207

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
             M   NV+    T  S L A +S+  L++GK ++  +I+ G  L   V ++L+DMYA+ 
Sbjct: 208 SNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKS 267

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G+++ A KVF+ +  +D++ W SM+     HG GKVA+  F +M     AP+ ITFL +L
Sbjct: 268 GSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVL 327

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            ACSH+GL++EG+ + ++M+  Y ++P   HY  +VDLLGRA HL+ A QF+  M I+PT
Sbjct: 328 TACSHAGLLDEGRHYFDMMK-KYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPT 386

Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
           A VW ALLGACR+H N ELG   A+ + ELD   PG +VL+ N++A + +W D  +VR  
Sbjct: 387 AAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKM 446

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
           M+ SG+KK P  SW+E+ N++H F+A D +H +  EI+    +I++K+ +E GYV  +  
Sbjct: 447 MKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKI-KEIGYVPDSSH 505

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
           VL  ++++E+   L  HSE+LA+A+ +L +  GS IRI KN+R+C DCHS  K VS+L  
Sbjct: 506 VLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVE 565

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           RE++VRD NRFHHF  G CSC DYW
Sbjct: 566 REIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 187/366 (51%), Gaps = 12/366 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG ++ A +LFD++S R V TW A++  Y  +  P   L     M  +G+  + FT
Sbjct: 59  LYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFT 118

Query: 61  FPCVIKACAMLKDLDC--GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++KA + +   D   G ++HGL L+ GYDS  ++  +++ MYA+C+   +A+ +FD 
Sbjct: 119 LASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDV 178

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K +V  WN++I+ Y+  GQ  +A  LF  M R  +    +T+ + L AC        
Sbjct: 179 MVSKNEVS-WNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQ 237

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  +HA  +K G+ L  +V N L+ MYA+ G + +A  V  +L  +D VSWNSMLTG+ Q
Sbjct: 238 GKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQ 297

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           + L   A+Q F E+      P+ +  +  ++A    G L  G+  H + + + +  + QI
Sbjct: 298 HGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR--HYFDMMKKYNVEPQI 355

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            + +         V+ +GR  +   A  FIS   I    A     L A  + + ++L G 
Sbjct: 356 SHYVT-------MVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGY 408

Query: 359 DADVMI 364
            A+ + 
Sbjct: 409 AAECIF 414



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 194/380 (51%), Gaps = 11/380 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++K C  L  L+ G  IH L+L   +     + N+L+ +YAKC D   AR+LFD M  + 
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR- 79

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED-SSFETL-GME 181
           DVV W ++I+ YS   +  +AL L  EM R+GL  N +T  + L+A     S + L G +
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   ++ G +  VYV+ A++ MYARC  + EA  +   + +K+ VSWN+++ G+ +   
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA   F  +     KP      + + A   +G+L  GK +HA  IK G      +GNT
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAK   +    +VF ++  +D +SW +++ GY+Q+     AL+ F  +    +  +
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319

Query: 362 VMIIGSVLMACSGLKCMSQTKE----IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
            +    VL ACS    + + +     +  Y +   +S  V +   VD+ G+ G++D +  
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTM---VDLLGRAGHLDRAIQ 376

Query: 418 VFESIESKDVVS-WTSMISS 436
               +  K   + W +++ +
Sbjct: 377 FISEMPIKPTAAVWGALLGA 396



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 90/175 (51%), Gaps = 6/175 (3%)

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           L   + L+ L +GK ++  ++   F  +  + ++L+++YA+CG L  A K+F+ + ++D+
Sbjct: 22  LKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDV 81

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN--EGKKFL 586
           + WT++I     H R + A+ L  +M      P+  T  +LL A S  G  +  +G++  
Sbjct: 82  VTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLH 141

Query: 587 EI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            + +R  Y  + +      ++D+  R +HLEEA Q +  + +      W AL+  
Sbjct: 142 GLCLRYGYDSNVYVS--CAILDMYARCHHLEEA-QLIFDVMVSKNEVSWNALIAG 193


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 268/763 (35%), Positives = 413/763 (54%), Gaps = 67/763 (8%)

Query: 80  IHGLVLKCGYDSTDFIV--NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           +  L++ C    T   +  NS +A YA+      AR++FD M +K  +V WNS+++ Y  
Sbjct: 1   MQSLLMPCRRYCTSVAIAYNSQIARYARIGQIESARRVFDEMPDK-GIVSWNSMVAGYFQ 59

Query: 138 SGQCLEALGLFREMQRVGLVT-NAYT--FVAALQACE-DSSFETLGMEIHAATVKSGQNL 193
           + +  EA  LF +M     V+ N     +V      E   +F+T+               
Sbjct: 60  NNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTM------------PER 107

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V    A++  Y + G ++EA  + +Q+  K+ VSW  ML G +Q     +A   F  + 
Sbjct: 108 NVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMP 167

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
                 D V   N +S   + G L   +EL     ++  +S      T++  Y +   V+
Sbjct: 168 ----VKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVIS----WTTMISGYVQNGQVD 219

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
              ++F  M  ++ +SWT ++ GY Q     +A ELF          D M + +V+ AC 
Sbjct: 220 VARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELF----------DAMPVKAVV-AC- 267

Query: 374 GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
                                     NA++  +G+ G +  +R VF+ I  KD  +W++M
Sbjct: 268 --------------------------NAMILGFGQNGEVAKARQVFDQIREKDDGTWSAM 301

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I  Y   G   EAL LF LM    V+S+  +L+S LS  +SL+ L  G++++  +++  F
Sbjct: 302 IKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQF 361

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
           + +  VAS L+ MY +CG L  A ++F+    KD+++W S+I     HG  + A+ +F++
Sbjct: 362 DSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHE 421

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           M +   A D +TF+ +L ACS++G + EG +  E M+  Y ++P  EHYAC+VDLLGRA 
Sbjct: 422 MCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAG 481

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISN 673
            + +A   ++ M +E  A +W ALLGACR H N  L E+ AKKLL+L+P N G Y+L+SN
Sbjct: 482 LVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSN 541

Query: 674 VFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR-DKSHSESDEIYKKLA 732
           ++A+  +W DV ++R  MR   + K+PG SWIE+  ++H F       H E   I K L 
Sbjct: 542 IYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLE 601

Query: 733 EITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNL 792
           ++   L RE GY   + FVLH+V+EEEKV+ L  HSERLA+A+G+LK  EG  IR+ KNL
Sbjct: 602 KLDGML-REAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNL 660

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           RVC DCHS  KL++++ GRE+++RDANRFHHF+ G CSC DYW
Sbjct: 661 RVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 129/235 (54%), Gaps = 5/235 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           +G+ G V  A Q+FD++ ++   TW+AM+  Y   G  +  L  ++ M+  G+  +  + 
Sbjct: 274 FGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSL 333

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+  CA L  LD G ++H  ++K  +DS  F+ + L+ MY KC D  KARQ+FDR   
Sbjct: 334 ISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSP 393

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D+V+WNSII+ Y+  G   EAL +F EM   G+ T+  TFV  L AC  +     G+E
Sbjct: 394 K-DIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLE 452

Query: 182 IHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           I   ++KS   ++    +   ++ +  R G + +A  ++ ++    D++ W ++L
Sbjct: 453 IF-ESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL 506



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 220/488 (45%), Gaps = 58/488 (11%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLR------------------VL 43
           Y + G +  A ++FD++  + + +WN+M+  Y  N  P                    ++
Sbjct: 26  YARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLI 85

Query: 44  ETYSRMRVLGISVDAF-TFP--CVIKACAMLKDLDCGAKIHGLVLKCG---YDSTDFIVN 97
             Y + R++  +  AF T P   V+   AM++    G    GLV +     +   +  V 
Sbjct: 86  SGYVKNRMVSEARKAFDTMPERNVVSWTAMVR----GYVQEGLVSEAETLFWQMPEKNVV 141

Query: 98  SLVAMYAKCYDFRK---ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR- 153
           S   M       R+   AR LFD M  K DVV   ++IS Y   G+  EA  LF EM R 
Sbjct: 142 SWTVMLGGLIQVRRIDEARGLFDIMPVK-DVVARTNMISGYCQEGRLAEARELFDEMPRR 200

Query: 154 ---------VGLVTNAYTFVA-----ALQACEDSSFETL-------GMEIHAATVKSGQN 192
                     G V N    VA      +    + S+  +       G    A+ +     
Sbjct: 201 NVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMP 260

Query: 193 LQVYVA-NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
           ++  VA NA+I  + + G++ +A  V  Q+  KD  +W++M+  + +     +A+  F  
Sbjct: 261 VKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFAL 320

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           +Q  G + +    ++ +S    L +L +G+++HA  +K  F SD+ + + L+ MY KC  
Sbjct: 321 MQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGD 380

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           +    ++F + + +D + W +II GYAQ+    +AL++F  +   G+  D +    VL A
Sbjct: 381 LVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSA 440

Query: 372 CSGLKCMSQTKEIHGYIIRKGLSDLVILN--AIVDVYGKCGNIDYSRNVFESIESK-DVV 428
           CS    + +  EI   +  K L +    +   +VD+ G+ G ++ + ++ + +  + D +
Sbjct: 441 CSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAI 500

Query: 429 SWTSMISS 436
            W +++ +
Sbjct: 501 IWGALLGA 508



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG ++ A Q+FD+ S + +  WN+++  Y  +G     L+ +  M   G++ D  T
Sbjct: 374 MYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVT 433

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDF-------RKAR 113
           F  V+ AC+    +  G +I   +       + ++V      YA   D          A 
Sbjct: 434 FVGVLSACSYTGKVKEGLEIFESM------KSKYLVEPKTEHYACMVDLLGRAGLVNDAM 487

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
            L  +M  + D ++W +++ A
Sbjct: 488 DLIQKMPVEADAIIWGALLGA 508


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/748 (32%), Positives = 397/748 (53%), Gaps = 73/748 (9%)

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +     L N +++AY+ SG+   A  +F EM    L T                      
Sbjct: 44  QAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR--------------------- 82

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                             NAL++  A    + +   +   +  +D+VS+N+++TGF    
Sbjct: 83  ------------------NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTG 124

Query: 241 LYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +++Q +R L +    +P ++     +  +  L +   G  +H   ++ GF +   +G
Sbjct: 125 SPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVG 184

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-------------------------------DFI 328
           + L+DMYAK   +    RVF +M A+                               D I
Sbjct: 185 SPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSI 244

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           +WTT++ G  QN   L+AL++FR ++ EG+  D    GS+L AC  L    + K+IH YI
Sbjct: 245 TWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYI 304

Query: 389 IRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
            R    D V + +A+VD+Y KC +I  +  VF  +  ++++SWT+MI  Y  N  + EA+
Sbjct: 305 TRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAV 364

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
             F  M    ++ D  TL S +S+ ++L+ L++G + +   +  G     +V+++LV +Y
Sbjct: 365 RAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLY 424

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
            +CG+++ A+++F+ +   D + WT+++      G+ K  IDLF KM      PD +TF+
Sbjct: 425 GKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFI 484

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
            +L ACS +GL+ +G  + + M+ D+ + P  +HY C++DL  R+   +EA +F++ M  
Sbjct: 485 GVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPH 544

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
            P A  W  LL +CR+  N E+G+  A+ LLE DP NP +YVL+ ++ AA  +W +V  +
Sbjct: 545 SPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHL 604

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           R  MR   +KK PG SWI+  NK+H F A D+SH  S  IY+KL  +  K+  E GY   
Sbjct: 605 RRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEE-GYKPD 663

Query: 748 TQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSR 807
              VLH+V + +KV M+  HSE+LAIA+G++   +   IRI KNLRVCVDCH+  K +S+
Sbjct: 664 VSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISK 723

Query: 808 LFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + GR+++VRDA RFH F  G CSCGD+W
Sbjct: 724 ITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 222/465 (47%), Gaps = 38/465 (8%)

Query: 8   VLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY-SRMRVLGISVDAFTFPCVIK 66
           V D E+LF  + +R   ++NA++  + S G P R ++ Y + +R   +     T   +I 
Sbjct: 95  VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154

Query: 67  ACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK---- 122
             + L D   G  +H  VL+ G+ +  F+ + LV MYAK    R AR++F  M  K    
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214

Query: 123 --------------------------EDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
                                      D + W ++++  + +G  LEAL +FR M+  G+
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YTF + L AC   +    G +IHA   ++     V+V +AL+ MY++C  +  A  
Sbjct: 275 GIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V  ++  ++ +SW +M+ G+ QN    +A++ F E+Q  G KPD     + +S+   L +
Sbjct: 335 VFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLAS 394

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G + H  A+  G +  + + N L+ +Y KC  +    R+F +M+  D +SWT ++ G
Sbjct: 395 LEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTG 454

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL 396
           YAQ     + ++LF  + + GL  D +    VL ACS    + +  +    + +    D+
Sbjct: 455 YAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKD--HDI 512

Query: 397 VILN----AIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISS 436
           V ++     ++D+Y + G    +    + +  S D   W +++SS
Sbjct: 513 VPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 187/395 (47%), Gaps = 11/395 (2%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           +C  + DA+ LF  +  R   TW  M+     NG  L  L+ + RMR  G+ +D +TF  
Sbjct: 224 RCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++ AC  L   + G +IH  + +  Y+   F+ ++LV MY+KC   R A  +F RM  + 
Sbjct: 284 ILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR- 342

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +++ W ++I  Y  +    EA+  F EMQ  G+  + +T  + + +C + +    G + H
Sbjct: 343 NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              + SG    + V+NAL+ +Y +CG + +A  +  ++   D VSW +++TG+ Q     
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAK 462

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           + +  F ++   G KPD V  +  +SA  R G +  G +      K   +  +    T M
Sbjct: 463 ETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCM 522

Query: 304 -DMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKA-LELFRTVQLEGLDA 360
            D+Y++            QM  + D   W T++     ++C L+  +E+ +      L+ 
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL-----SSCRLRGNMEIGKWAAENLLET 577

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           D     S ++ CS      Q  E+    +R+G+ D
Sbjct: 578 DPQNPASYVLLCSMHAAKGQWTEVAH--LRRGMRD 610



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 117/236 (49%), Gaps = 3/236 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC S+  AE +F +++ R + +W AM+  Y  N      +  +S M++ GI  D FT
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFT 381

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +CA L  L+ GA+ H L L  G      + N+LV +Y KC     A +LFD M 
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM- 440

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V W ++++ Y+  G+  E + LF +M   GL  +  TF+  L AC  +     G 
Sbjct: 441 SFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGC 500

Query: 181 EIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLT 234
           +   +  K    + +      +I +Y+R G+  EA   + Q+ +  D+  W ++L+
Sbjct: 501 DYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 223/560 (39%), Positives = 350/560 (62%), Gaps = 2/560 (0%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           LL GK  HA  +  G  +DL   N L++MY+KC  V++  +VF +M ++  +SW T+I  
Sbjct: 80  LLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGS 139

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-D 395
             QN    +AL+L   +Q EG       I SVL AC+    +S+ + +H + I+  +  +
Sbjct: 140 LTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLN 199

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + +  A++DVY KCG +  +  VFES+  + VV+W+SM + YV N +  +AL LF    E
Sbjct: 200 VFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWE 259

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
             ++ D   + S + A + L+ + +GK++N  + + GF     VASSL+DMYA+CG ++ 
Sbjct: 260 TGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEE 319

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           + KVF  V+ ++++LW +MI+    H R    + LF KM+    +P+ +TF+++L AC H
Sbjct: 320 SYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
            GL+ +G+K+ ++M  ++ L P   HY+C+VD L RA  + EAY  +  +    +A +W 
Sbjct: 380 MGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           +LL +CR H N EL E+ AKKL +++P N GNY+L+SN++AA+ KW +V ++R  ++ S 
Sbjct: 440 SLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESD 499

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           +KK  G SWIEI +K+H F+  +++H +  EIY KL E+ ++L++  GY  +TQ  LH V
Sbjct: 500 VKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKL-GYKVETQHDLHQV 558

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
            E  K ++L  HSE+LA   G+L     + IRI KNLR+C DCHSF KL S+ F R+++V
Sbjct: 559 GESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIV 618

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD NRFHHF+ G CSCGD+W
Sbjct: 619 RDTNRFHHFKNGCCSCGDFW 638



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 201/381 (52%), Gaps = 4/381 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++K CA  K L  G   H  +L  G  +     N L+ MY+KC     ARQ+FD M  + 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR- 128

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            +V WN++I + + +G+  EAL L  +MQR G   + +T  + L AC      +    +H
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           A  +K+  +L V+VA AL+ +YA+CG M +A  V   + ++  V+W+SM  G+VQN++Y 
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+  FR+    G K DQ    + + A   L  ++ GK+++A   K GF S++ + ++L+
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLI 308

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMYAKC  +    +VF  +  ++ + W  +I+G +++   L+ + LF  +Q  GL  + +
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFES 421
              SVL AC  +  + + ++    + ++     ++   + +VD   + G I  + ++   
Sbjct: 369 TFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISK 428

Query: 422 IESKDVVS-WTSMISSYVHNG 441
           +      S W S+++S   +G
Sbjct: 429 LPFNASASMWGSLLASCRTHG 449



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 167/329 (50%), Gaps = 9/329 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV  A Q+FD++  R++ +WN M+G+   NGE    L+   +M+  G     FT
Sbjct: 108 MYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFT 167

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA    L     +H   +K   D   F+  +L+ +YAKC   + A  +F+ M 
Sbjct: 168 ISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP 227

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++  VV W+S+ + Y  +    +AL LFR+    GL  + +   + + AC   +    G 
Sbjct: 228 DR-SVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGK 286

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +++A   KSG    ++VA++LI MYA+CG + E+  V   +E ++ V WN+M++G  ++ 
Sbjct: 287 QVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHA 346

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              + M  F ++Q  G  P+ V  V+ +SA G +G +  G++      K+  ++      
Sbjct: 347 RSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAP----- 401

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
              +++   C V+ + R      A D IS
Sbjct: 402 ---NVFHYSCMVDTLSRAGQIFEAYDLIS 427



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 59/105 (56%)

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           +L +GK  +  I+  G   +   ++ L++MY++CG++D A +VF+ + ++ L+ W +MI 
Sbjct: 79  LLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIG 138

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
           +   +G    A+DL  +M+ E       T  ++L AC+    ++E
Sbjct: 139 SLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSE 183


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 237/759 (31%), Positives = 432/759 (56%), Gaps = 4/759 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFT 60
           Y   G +  A + F    +R V +WN+ML  ++ NGE  + ++ +  M R   +  D  T
Sbjct: 119 YADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTT 178

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+KAC++L+D   G ++HGL+++ G+       ++L+ MYAKC     + ++F  + 
Sbjct: 179 FAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIP 238

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K + V W++II+    + + +  L LF+EMQ+VG+  +   + +  ++C   S   +G 
Sbjct: 239 VK-NWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGT 297

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +K      + V  A + MYA+CG + +A  +   L       +N+++ G V+N+
Sbjct: 298 QLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNE 357

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+QFF+ L  +G   +++    A SA   +   L+G++LH+ ++K    S++ + N
Sbjct: 358 KGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVAN 417

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +++DMY KC  ++    +F +M  +D +SW  +IA + QN    + L LF ++    ++ 
Sbjct: 418 SILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEP 477

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D    GSVL ACS  + ++   EIH  II+ GL  D  +  A++D+Y KCG I+ ++ + 
Sbjct: 478 DQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIH 537

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + IE + +VSW ++I+ +     + +A   FY M + +V+ D+ T    L A ++L+ + 
Sbjct: 538 DRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVG 597

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GK+++G II+   + +  + S+LVDMY++CG +  +  VF     KD + W +MI    
Sbjct: 598 LGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYA 657

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG G+ A+  F +M+ E+  P+H TF+++L AC+H G I++G  +   M  +Y L+P  
Sbjct: 658 QHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQI 717

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY+C++D++GR+  + EA + ++ M  E  A +W  LL  C++H N E+ E     +L+
Sbjct: 718 EHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQ 777

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P +    +L+SN++A +  W  V ++R  MR + LKK PG SWIE+ +++H+F+  +K
Sbjct: 778 LEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNK 837

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
           +H   +EIYK L+ + +++ +  GY+    F++    EE
Sbjct: 838 THPRYEEIYKILSVLLDEM-KWIGYIPDIDFLIDEESEE 875



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 161/595 (27%), Positives = 300/595 (50%), Gaps = 41/595 (6%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  +I+ C+    L  G + H  ++  G+    +I N L+ MY +C     A ++F++M
Sbjct: 45  TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104

Query: 120 GEKEDVVLWNSIISAYS-------------------------------ASGQCLEALGLF 148
            ++ DV+ +N++IS Y+                                +G+C +++ +F
Sbjct: 105 SQR-DVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVF 163

Query: 149 REMQR---VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
            +M R   VG   +  TF   L+AC       LG+++H   V+ G    V   +AL+ MY
Sbjct: 164 LDMGRSEEVGF--DQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMY 221

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
           A+C ++ ++  +  ++  K+ V W++++ G VQND +   ++ F+E+Q  G    Q    
Sbjct: 222 AKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYA 281

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           +   +   L  L  G +LHA+A+K  F SD+ +G   +DMYAKC  +    R+F  +   
Sbjct: 282 SVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKH 341

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
               +  II G  +N    +AL+ F+ +   GL  + + +     AC+ +K     +++H
Sbjct: 342 SLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLH 401

Query: 386 GYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
              ++  L S++ + N+I+D+YGKC  +  +  +F+ +E +D VSW ++I+++  NG   
Sbjct: 402 SLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEE 461

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           E L LF  M    +E D  T  S L A SS   L  G E++  II+ G  L+  V  +L+
Sbjct: 462 ETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALI 521

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMY +CG ++ A K+ + ++ + ++ W ++I    L    + A   FY+M   S  PD+ 
Sbjct: 522 DMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNF 581

Query: 565 TFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
           T+  +L AC++   +  GK+   +I++ +   D +    + LVD+  +  +++++
Sbjct: 582 TYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYIT--STLVDMYSKCGNMQDS 634



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 162/550 (29%), Positives = 273/550 (49%), Gaps = 4/550 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  + D+ ++F ++  +    W+A++   V N E +  LE +  M+ +GI V    
Sbjct: 220 MYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSI 279

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V ++CA L  L  G ++H   LKC + S   +  + + MYAKC     A+++F+ + 
Sbjct: 280 YASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSL- 338

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  +  +N+II     + +  EAL  F+ + + GL  N  +   A  AC     +  G 
Sbjct: 339 PKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGR 398

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+ +VKS     + VAN+++ MY +C  ++EA  +  ++E +D+VSWN+++    QN 
Sbjct: 399 QLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNG 458

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              + +  F  +     +PDQ    + + A      L +G E+H   IK G   D  +G 
Sbjct: 459 NEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGG 518

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY KC  +    ++  ++  Q  +SW  IIAG+        A   F  +    +  
Sbjct: 519 ALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKP 578

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D      VL AC+ L  +   K+IHG II+  L SD+ I + +VD+Y KCGN+  S  VF
Sbjct: 579 DNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVF 638

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E   +KD V+W +MI  Y  +GL  EAL  F  M   NV  +  T VS L A + +  + 
Sbjct: 639 EKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFID 698

Query: 480 KGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           KG    N  +   G   +    S ++D+  R G +  A K+   +  + D ++W ++++ 
Sbjct: 699 KGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSI 758

Query: 538 NGLHGRGKVA 547
             +HG  ++A
Sbjct: 759 CKIHGNIEIA 768



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 268/554 (48%), Gaps = 38/554 (6%)

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC- 208
           +  +  L T   TF   +Q C D +    G + HA  + SG    VY++N L+ MY RC 
Sbjct: 33  QQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCS 92

Query: 209 ------------------------------GKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
                                         G+M  A    Y    +D VSWNSML+GF+Q
Sbjct: 93  HLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQ 152

Query: 239 NDLYCKAMQFFRELQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           N    K++  F ++  + +   DQ      + A   L +   G ++H   ++ GF  D+ 
Sbjct: 153 NGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVV 212

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
            G+ L+DMYAKC  ++   ++F ++  ++++ W+ IIAG  QN+ H+  LELF+ +Q  G
Sbjct: 213 TGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVG 272

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +     I  SV  +C+GL  +    ++H + ++    SD+ +  A +D+Y KCG++  ++
Sbjct: 273 IGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQ 332

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F S+    +  + ++I   V N    EAL+ F L+ ++ +  + I+L  A SA +S+ 
Sbjct: 333 RIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIK 392

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
               G++L+   ++        VA+S++DMY +C AL  A  +F+ ++ +D + W ++I 
Sbjct: 393 GDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIA 452

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQL 595
           A+  +G  +  ++LF  M      PD  T+ ++L ACS    +N G +    I++    L
Sbjct: 453 AHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGL 512

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           D +      L+D+  +   +EEA +    ++ + T   W A++    +  + E       
Sbjct: 513 DSFVG--GALIDMYCKCGMIEEAKKIHDRIE-QQTMVSWNAIIAGFTLLKHSEDAHSFFY 569

Query: 656 KLLELDPGNPGNYV 669
           ++L++    P N+ 
Sbjct: 570 EMLKMSV-KPDNFT 582



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 201/378 (53%), Gaps = 4/378 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC ++ +A  +FD++ +R   +WNA++ A+  NG     L  ++ M  L +  D FT
Sbjct: 422 MYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFT 481

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+KAC+  + L+ G +IH  ++K G     F+  +L+ MY KC    +A+++ DR+ 
Sbjct: 482 YGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRI- 540

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E++ +V WN+II+ ++      +A   F EM ++ +  + +T+   L AC + +   LG 
Sbjct: 541 EQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGK 600

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K   +  VY+ + L+ MY++CG M ++A V  +  NKD V+WN+M+ G+ Q+ 
Sbjct: 601 QIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHG 660

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIG 299
           L  +A+ +F  +Q    +P+    V+ + A   +G +  G    +A   + G    ++  
Sbjct: 661 LGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHY 720

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIA-GYAQNNCHLKALELFRTVQLEG 357
           + ++D+  +   ++   ++  +M  + D + W T+++      N  +        +QLE 
Sbjct: 721 SCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEP 780

Query: 358 LDADVMIIGSVLMACSGL 375
            D+   I+ S + A +G+
Sbjct: 781 EDSSACILLSNIYADAGM 798


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/657 (35%), Positives = 376/657 (57%), Gaps = 43/657 (6%)

Query: 187 VKSGQNL-------QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           ++  QNL        ++  NAL++ YA+ G +        ++  +DSVS+N+ + GF  N
Sbjct: 74  LRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGN 133

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               ++++ F+ +Q  G +P +   V+ ++AS +L +L  GK++H   I + F+ ++ I 
Sbjct: 134 SCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIW 193

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L DMYAKC  +     +F  +T ++ +SW  +I+GYA+N    K + L   ++L G  
Sbjct: 194 NALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSG-- 251

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
                                            + D V ++ I+  Y +CG +D +R VF
Sbjct: 252 --------------------------------HMPDQVTMSTIIAAYCQCGRVDEARRVF 279

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
              + KD+V WT+M+  Y  NG   +AL LF  M   ++E DS TL S +S+ + L+ L 
Sbjct: 280 SEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLH 339

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G+ ++G  I  G N    V+S+L+DMY++CG +D A  VFN + T++++ W +MI    
Sbjct: 340 HGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCA 399

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            +G  K A++LF  M  + F PD++TF+ +L AC H   I +G+++ + +   + + P  
Sbjct: 400 QNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTL 459

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           +HYAC+V+LLGR   +E+A   +++M  +P   +W  LL  C    +    E+ A+ L E
Sbjct: 460 DHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFE 519

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LDP     Y+++SN++A+  +WKDV  VR  M+   +KK  G SWIEI N++H F + D+
Sbjct: 520 LDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDR 579

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           +H ES++IY+KL  +  KL+ E G+   T  VLH+V E+EK + +  HSE+LA+A+G++K
Sbjct: 580 THPESEDIYEKLNMLIGKLQEE-GFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIK 638

Query: 780 STEG-SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
              G S IRI KN+R+C DCH F K  SR+ GR++++RD+NRFHHF  G CSC D W
Sbjct: 639 KPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 232/483 (48%), Gaps = 71/483 (14%)

Query: 89  YDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQC------ 141
           +  TD F+ N L+ +YAK    R A+ LFD+M  K D+  WN+++SAY+ SG        
Sbjct: 53  FQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM-LKRDIFSWNALLSAYAKSGSIQNLKAT 111

Query: 142 -------------------------LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
                                     E+L LF+ MQR G     YT V+ L A    S  
Sbjct: 112 FDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDL 171

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G +IH + +       V++ NAL  MYA+CG++ +A  +   L  K+ VSWN M++G+
Sbjct: 172 RYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGY 231

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            +N    K +    +++ +G  PDQV     ++A                          
Sbjct: 232 AKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA-------------------------- 265

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
                    Y +C  V+   RVF +   +D + WT ++ GYA+N     AL LF  + LE
Sbjct: 266 ---------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE 316

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
            ++ D   + SV+ +C+ L  +   + +HG  I  GL ++L++ +A++D+Y KCG ID +
Sbjct: 317 HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDA 376

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           R+VF  + +++VVSW +MI     NG   +ALELF  M +   + D++T +  LSA    
Sbjct: 377 RSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436

Query: 476 SILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTS 533
           + +++G+E  +    + G        + +V++  R G ++ A  +  N     D ++W++
Sbjct: 437 NWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWST 496

Query: 534 MIN 536
           +++
Sbjct: 497 LLS 499



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 221/469 (47%), Gaps = 70/469 (14%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE---------------------- 38
           +Y K G + DA+ LFDK+ +R +F+WNA+L AY  +G                       
Sbjct: 67  LYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTT 126

Query: 39  ---------PLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                    P   LE + RM+  G     +T   ++ A A L DL  G +IHG ++   +
Sbjct: 127 IAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNF 186

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
               FI N+L  MYAKC +  +AR LFD +  K+++V WN +IS Y+ +GQ  + +GL  
Sbjct: 187 LGNVFIWNALTDMYAKCGEIEQARWLFDCL-TKKNLVSWNLMISGYAKNGQPEKCIGLLH 245

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +M+  G + +  T                                    + +IA Y +CG
Sbjct: 246 QMRLSGHMPDQVTM-----------------------------------STIIAAYCQCG 270

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
           ++ EA  V  + + KD V W +M+ G+ +N     A+  F E+     +PD     + VS
Sbjct: 271 RVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVS 330

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           +  +L +L +G+ +H  +I  G  ++L + + L+DMY+KC  ++    VF  M  ++ +S
Sbjct: 331 SCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVS 390

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W  +I G AQN     ALELF  +  +    D +    +L AC     + Q +E    I 
Sbjct: 391 WNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSIT 450

Query: 390 RK-GLSDLVILNA-IVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMIS 435
            + G++  +   A +V++ G+ G I+ +  + +++    D + W++++S
Sbjct: 451 NQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/584 (37%), Positives = 369/584 (63%), Gaps = 8/584 (1%)

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P Q    + + +  +  +L +G ++H   +  GF  D  +   L++MY +   ++   +V
Sbjct: 76  PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS----G 374
           F +   +    W  +    A   C  + L+L+  +   G+ +D      VL AC      
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +  + + KEIH +I+R G  +++ ++  ++DVY K G++ Y+ +VF ++ +K+ VSW++M
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255

Query: 434 ISSYVHNGLANEALELFYLMNEANVES--DSITLVSALSAASSLSILKKGKELNGFIIRK 491
           I+ +  N +  +ALELF LM     +S  +S+T+V+ L A + L+ L++GK ++G+I+R+
Sbjct: 256 IACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRR 315

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           G +    V ++L+ MY RCG + +  +VF+ ++ +D++ W S+I+  G+HG GK AI +F
Sbjct: 316 GLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIF 375

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
             M  +  +P +I+F+ +L ACSH+GL+ EGK   E M   Y++ P  EHYAC+VDLLGR
Sbjct: 376 ENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 435

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
           AN L+EA + +  M  EP   VW +LLG+CR+H N EL E  +  L EL+P N GNYVL+
Sbjct: 436 ANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLL 495

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           ++++A ++ W + + V   +   GL+K PG SWIE+  K++SF++ D+ + + +EI+  L
Sbjct: 496 ADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALL 555

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKN 791
            +++ +++ + GYV QT  VL++++EEEK +++ GHSE+LA+A+G++ + +G  IRI KN
Sbjct: 556 VKLSNEMKAQ-GYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKN 614

Query: 792 LRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           LR+C DCH+  K +S+   RE++VRD NRFHHF+ GVCSCGDYW
Sbjct: 615 LRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 199/413 (48%), Gaps = 19/413 (4%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  +I +CA    L  G  +H  ++  G+D   F+   L+ MY +     +AR++FD  
Sbjct: 80  TFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDET 139

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET-- 177
            E+  + +WN++  A +  G   E L L+ +M  +G+ ++ +T+   L+AC  S      
Sbjct: 140 RER-TIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSP 198

Query: 178 --LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G EIHA  ++ G    ++V   L+ +YA+ G ++ A  V   +  K+ VSW++M+  
Sbjct: 199 LQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIAC 258

Query: 236 FVQNDLYCKAMQFFR--ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           F +N++  KA++ F+   L+     P+ V  VN + A   L  L  GK +H Y +++G  
Sbjct: 259 FAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLD 318

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S L + N L+ MY +C  +    RVF  M  +D +SW ++I+ Y  +    KA+++F  +
Sbjct: 319 SILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENM 378

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTK-----EIHGYIIRKGLSDLVILNAIVDVYGK 408
             +G     +   +VL ACS    + + K      +  Y I  G+        +VD+ G+
Sbjct: 379 IHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYA---CMVDLLGR 435

Query: 409 CGNIDYSRNVFESIE-SKDVVSWTSMISS---YVHNGLANEALELFYLMNEAN 457
              +D +  + E +        W S++ S   + +  LA  A  L + +   N
Sbjct: 436 ANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRN 488



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 168/323 (52%), Gaps = 15/323 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + GS+  A ++FD+  +RT++ WNA+  A    G    +L+ Y +M  +GI  D FT
Sbjct: 122 MYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFT 181

Query: 61  FPCVIKACAM----LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           +  V+KAC +    +  L  G +IH  +L+ GY++   ++ +L+ +YAK      A  +F
Sbjct: 182 YTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVF 241

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACEDSS 174
             M  K + V W+++I+ ++ +   ++AL LF+ M  +    V N+ T V  LQAC   +
Sbjct: 242 CAMPTK-NFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLA 300

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  IH   ++ G +  + V NALI MY RCG++     V   ++N+D VSWNS+++
Sbjct: 301 ALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLIS 360

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            +  +    KA+Q F  +   G  P  +  +  + A    G +  GK L      +  +S
Sbjct: 361 IYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILF-----ESMLS 415

Query: 295 DLQIGNTLMDMYAKCCCVNYMGR 317
             +I +  M+ YA  C V+ +GR
Sbjct: 416 KYRI-HPGMEHYA--CMVDLLGR 435


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/560 (40%), Positives = 341/560 (60%), Gaps = 3/560 (0%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  GK+LHA   + G   +L +   L++ Y+ C  +     +F ++   +   W  +I  
Sbjct: 74  LEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRA 133

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-D 395
           YA N  H  A+ L+  +   GL  D   +  VL ACS L  + + + IH  +IR G   D
Sbjct: 134 YAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERD 193

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + +  A+VD+Y KCG +  +R+VF+ I  +D V W SM+++Y  NG  +E+L L   M  
Sbjct: 194 VFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAA 253

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
             V     TLV+ +S+++ ++ L  G+E++GF  R GF     V ++L+DMYA+CG++ +
Sbjct: 254 KGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKV 313

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A  +F  ++ K ++ W ++I    +HG    A+DLF +M  E+  PDHITF+  L ACS 
Sbjct: 314 ACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSR 372

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
             L++EG+    +M  D +++P  EHY C+VDLLG    L+EAY  +R M + P + VW 
Sbjct: 373 GRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWG 432

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL +C+ H N EL E+  +KL+EL+P + GNYV+++N++A S KW+ V ++R  M   G
Sbjct: 433 ALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKG 492

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           +KK    SWIE+ NK+++F++ D SH  S  IY +L  + E L RE GYV  T  V H+V
Sbjct: 493 IKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRL-EGLMREAGYVPDTGSVFHDV 551

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           EE+EK  M+  HSERLAIA+G++ +  G+ + ITKNLR+C DCH   K +S++  RE+ V
Sbjct: 552 EEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITV 611

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD NR+HHF  G+CSCGDYW
Sbjct: 612 RDVNRYHHFRHGLCSCGDYW 631



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 205/396 (51%), Gaps = 8/396 (2%)

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           + +  ++++C   K L+ G ++H  + + G      +   LV  Y+ C   R A  LFD+
Sbjct: 59  YYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDK 118

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           +  K ++ LWN +I AY+ +G    A+ L+ +M   GL  + +T    L+AC   S    
Sbjct: 119 I-PKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGE 177

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  IH   ++SG    V+V  AL+ MYA+CG + +A  V  ++ ++D+V WNSML  + Q
Sbjct: 178 GRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQ 237

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N    +++    E+   G +P +   V  +S+S  +  L +G+E+H +  + GF  + ++
Sbjct: 238 NGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKV 297

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
              L+DMYAKC  V     +F ++  +  +SW  II GYA +   ++AL+LF  +  E  
Sbjct: 298 KTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEAQ 357

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYSR 416
              +  +G+ L ACS  + + + + ++  ++R    +  +     +VD+ G CG +D + 
Sbjct: 358 PDHITFVGA-LAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAY 416

Query: 417 NVFESIE-SKDVVSWTSMISSYVHNG---LANEALE 448
           ++   ++   D   W ++++S   +G   LA  ALE
Sbjct: 417 DLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALE 452



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 217/425 (51%), Gaps = 13/425 (3%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           +N Y + + L++C  +     G ++HA   + G    + +A  L+  Y+ C  +  A  +
Sbjct: 56  SNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHL 115

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++   +   WN ++  +  N  +  A+  + ++   G KPD       + A   L  +
Sbjct: 116 FDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTI 175

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+ +H   I+ G+  D+ +G  L+DMYAKC CV     VF ++  +D + W +++A Y
Sbjct: 176 GEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAY 235

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
           AQN    ++L L   +  +G+      + +V+ + + + C+   +EIHG+  R G   + 
Sbjct: 236 AQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYND 295

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNE 455
            +  A++D+Y KCG++  +  +FE +  K VVSW ++I+ Y  +GLA EAL+LF  +M E
Sbjct: 296 KVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKE 355

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALD 514
           A  + D IT V AL+A S   +L +G+ L   ++R    N      + +VD+   CG LD
Sbjct: 356 A--QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLD 413

Query: 515 IANKVFNCVQTKDLI----LWTSMINANGLHGRGKVA-IDLFYKMEAESFAPDHITFLAL 569
            A   ++ ++  D++    +W +++N+   HG  ++A + L   +E E     +   LA 
Sbjct: 414 EA---YDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILAN 470

Query: 570 LYACS 574
           +YA S
Sbjct: 471 MYAQS 475



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 15/382 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            Y  C S+ +A  LFDK+ +  +F WN ++ AY  NG     +  Y +M   G+  D FT
Sbjct: 102 FYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFT 161

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            P V+KAC+ L  +  G  IH  V++ G++   F+  +LV MYAKC     AR +FD++ 
Sbjct: 162 LPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIV 221

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ D VLWNS+++AY+ +G   E+L L  EM   G+     T V  + +  D +    G 
Sbjct: 222 DR-DAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGR 280

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH    + G      V  ALI MYA+CG +  A  +  +L  K  VSWN+++TG+  + 
Sbjct: 281 EIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHG 340

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A+  F  +    Q PD +  V A++A  R G LL+       A+    V D +I  
Sbjct: 341 LAVEALDLFERMMKEAQ-PDHITFVGALAACSR-GRLLD----EGRALYNLMVRDCRINP 394

Query: 301 T------LMDMYAKCCCVNYMGRVFYQMTA-QDFISWTTII-AGYAQNNCHLKALELFRT 352
           T      ++D+   C  ++    +  QM    D   W  ++ +     N  L  + L + 
Sbjct: 395 TVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKL 454

Query: 353 VQLEGLDADVMIIGSVLMACSG 374
           ++LE  D+   +I + + A SG
Sbjct: 455 IELEPDDSGNYVILANMYAQSG 476



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 4/205 (1%)

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           ++H   A + +    + +  +  S+     S L +  S   L+ GK+L+  + + G    
Sbjct: 33  FLHQSFATQLIPQHKVDSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYN 92

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             +A+ LV+ Y+ C +L  A+ +F+ +   +L LW  +I A   +G  + AI L+++M  
Sbjct: 93  LDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLE 152

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHL 615
               PD+ T   +L ACS    I EG+   E ++R  ++ D +    A LVD+  +   +
Sbjct: 153 YGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVG--AALVDMYAKCGCV 210

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGA 640
            +A + V    ++  A +W ++L A
Sbjct: 211 VDA-RHVFDKIVDRDAVLWNSMLAA 234


>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
 gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
          Length = 948

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/851 (29%), Positives = 451/851 (52%), Gaps = 25/851 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   G+  +A ++FD +    V ++ A++ AYV+ G+P   L+     R+     D   
Sbjct: 107 MYAAFGNPGEARRIFDGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSM 166

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM- 119
               ++A  M +DL  G   H  + +CGYD    +  SL+ MY+ C +   A Q FDR  
Sbjct: 167 LAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAF 226

Query: 120 --GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
                 DVV W  I++A +     + AL LF  M+  G+V +   FV  L +        
Sbjct: 227 LRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIA 286

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G  IH+  +         V  A++ MYAR G + +A     +++     +W  ++  + 
Sbjct: 287 QGKRIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYC 346

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ---GFVS 294
           +   +   MQ    ++  G KP++V  +  +     L  L +GK++ A A +Q      +
Sbjct: 347 RLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLA-LEDGKKIQALASEQQQRSLDA 405

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
             +IG  ++ M+++   +      F +++ +   ++T +IAGYA N    +AL +F+ + 
Sbjct: 406 SARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMI 465

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
              + AD +++   + AC+ +  + + K +H   +  GL  D V+  A+VD+Y +CG+++
Sbjct: 466 RRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSME 525

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  VF  IE  D V+W++MI++   +G    A+ +   M +        T+V  L+A +
Sbjct: 526 DASAVFGEIERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACA 585

Query: 474 SLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
              ++++  ++++  ++  GF+ +  V  +++ MYA+ G++  A   F+ ++  D+  WT
Sbjct: 586 HAGMIEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWT 645

Query: 533 SMINAN---GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           +M+ A    G +     A+ L   M+ +   PD +TF+ +L AC++ G + E  ++ + M
Sbjct: 646 TMLEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDM 705

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN--- 646
           + DY L P  EHY  LVD + R  +L+EA   +R + ++    +W ALL  C+  ++   
Sbjct: 706 KFDYGLVPEMEHYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPR 765

Query: 647 -KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
            + +GEI+ K   +LDP   G + + +       +W++ ++VR  M   G+KK PG S I
Sbjct: 766 TQRVGEIIMKINNKLDPLGTGAHRVAA-------RWEEAKRVRKLMTDRGIKKEPGKSMI 818

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
            I N +H F+A D+SH  + EIY ++  IT  ++++G Y+  T++VLH+V E++K ++L+
Sbjct: 819 SIKNTVHGFVAGDRSHPHTREIYAEVDRITALIKKDG-YIPDTRYVLHDVPEDKKERLLW 877

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHF- 824
            HSERLA+AYG + +  G  +R+ KNLRVC DCH+  KL +++  RE++VRD  RFHHF 
Sbjct: 878 YHSERLAMAYGHMNTPPGQPLRVIKNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFA 937

Query: 825 EAGVCSCGDYW 835
           + G CSCGDYW
Sbjct: 938 KDGTCSCGDYW 948



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 159/621 (25%), Positives = 305/621 (49%), Gaps = 17/621 (2%)

Query: 35  SNGEPLRVLETYSRM---RVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDS 91
           S GE  R L+ + R+   R     VD++    V++ C  L+ +  GA++H  + +   ++
Sbjct: 39  SRGEDFRELQEFLRIIDARDEPFDVDSYQH--VLQLCTRLRAMAEGARVHDHIRRSRMEA 96

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
             F+ N LV MYA   +  +AR++FD +G   +V+ + +I+ AY  +G   EAL +    
Sbjct: 97  ERFVGNDLVFMYAAFGNPGEARRIFDGLGS-HNVLSFTAIMRAYVTAGDPDEALKILHLA 155

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
           +      +      A++A       +LG   H    + G +L   VA +LI MY+ CG++
Sbjct: 156 RLKAFKADPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEI 215

Query: 212 TEAAGVL----YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
             A         +  + D VSW  +L    ++  Y  A+  F  ++  G  PD++C V  
Sbjct: 216 EAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTV 275

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           + +   LG++  GK +H+  + +    D  +G  ++ MYA+   +    R F ++     
Sbjct: 276 LDSVIGLGDIAQGKRIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGV 335

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
            +WT ++  Y +       +++   ++ EG+  + +   ++L  C  L  +   K+I   
Sbjct: 336 AAWTVLVGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNL-ALEDGKKIQAL 394

Query: 388 IIRKGLSDL----VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
              +    L     I  A++ ++ +  ++  +R  F+ I  K V ++T+MI+ Y +N   
Sbjct: 395 ASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQP 454

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
            EAL +F  M    V +D++ L  A+SA +S+  L++GK L+   +  G + +  V ++L
Sbjct: 455 REALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTAL 514

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           VDMY+RCG+++ A+ VF  ++  D + W++MI A G HG  + A+ +  +M+ + + P  
Sbjct: 515 VDMYSRCGSMEDASAVFGEIERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSG 574

Query: 564 ITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
            T + +L AC+H+G+I E  + +  +  D   D  PE    ++ +  +   ++EA     
Sbjct: 575 ATMVGVLAACAHAGMIEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFD 634

Query: 624 SMQIEPTAEVWCALLGA-CRV 643
            ++  P  + W  +L A CR+
Sbjct: 635 KIE-NPDVKAWTTMLEAYCRL 654


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/710 (34%), Positives = 391/710 (55%), Gaps = 38/710 (5%)

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM--YARCGKMTEAAGV 217
            +  ++ L+ CE  S + L  ++H   +K G N    + N ++        G    A  +
Sbjct: 18  THPLISLLETCE--SMDQL-QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRL 74

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++   +   WN+M+ G+ + D     +  + E+   G KPD+           R   L
Sbjct: 75  FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIAL 134

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G++LH + +K G   ++ +   L+ MY  C  ++    VF      D I+W  II+ Y
Sbjct: 135 EYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAY 194

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDL 396
            +     ++  LF  ++ + +    + +  VL ACS LK +   K++H Y+   K  S+L
Sbjct: 195 NKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL 254

Query: 397 VILNAIVDVYGKCGN-------------------------------IDYSRNVFESIESK 425
           V+ NA++D+Y  CG                                ID +RN F+ +  K
Sbjct: 255 VLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 314

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           D VSWT+MI  Y+ +    EALELF  M   NV+ D  T+VS L+A + L  L+ G+ + 
Sbjct: 315 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 374

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
            +I R     +  V ++L+DMY +CG +D A  +F  +  +D   WT+MI    ++G G+
Sbjct: 375 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 434

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A+D+F  M   S  PD IT++ +L AC+H+GL+++G+K+   M   + ++P   HY CL
Sbjct: 435 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 494

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           VDLL RA  L+EAY+ + +M I+  + VW ALL  CRV+   ++ E+V K++LEL+P N 
Sbjct: 495 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNG 554

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
             YVL+ N++AA ++W D+ ++R  M   G+KKTPG S IE+  ++H F+A D+SH ++ 
Sbjct: 555 AVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTK 614

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
            I  KL ++T+ L +  GY      V  ++ EE+K   ++ HSE+LAIA+G++ S  G  
Sbjct: 615 NIDAKLDKMTQDL-KLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVT 673

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           IRITKNLR+C+DCH+  KLVS+++ RE++VRD  RFHHF+ G+CSC DYW
Sbjct: 674 IRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 257/522 (49%), Gaps = 45/522 (8%)

Query: 55  SVDAFTFPC--VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAM--YAKCYDFR 110
           ++ +F+ P   +I      + +D   ++H   +K G ++   + N ++      +  DF+
Sbjct: 10  ALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 69

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
            AR+LFD + E  ++ +WN++I  YS        + L+ EM R G+  + YTF    +  
Sbjct: 70  YARRLFDEIPEP-NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 128

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
                   G ++H   +K G    V+V  AL+ MY  CG++  A GV       D ++WN
Sbjct: 129 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 188

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
            +++ + +   + ++ + F  ++     P  V  V  +SA  +L +L  GK++H+Y    
Sbjct: 189 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 248

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA--------------- 335
              S+L + N ++DMYA C  ++    +F  M  +D ISWTTI++               
Sbjct: 249 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 308

Query: 336 ----------------GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
                           GY ++N   +ALELFR +Q   +  D   + SVL AC+ L  + 
Sbjct: 309 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 368

Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             + I  YI R  + +DL + NA++D+Y KCG++D + ++F  +  +D  +WT+MI    
Sbjct: 369 LGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLA 428

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR--KGFNLE 496
            NG   +AL++F  M +A++  D IT +  LSA +   ++ KG++   + +R      +E
Sbjct: 429 VNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHGIE 485

Query: 497 GSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
            ++A    LVD+ AR G L  A +V   +  K + I+W +++
Sbjct: 486 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALL 527



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 218/462 (47%), Gaps = 41/462 (8%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A +LFD++ +  +F WN M+  Y     P   +  Y  M   G+  D +TFP + K    
Sbjct: 71  ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
              L+ G ++HG VLK G     F+  +LV MY  C     AR +FD +  K DV+ WN 
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFD-VCPKADVITWNM 189

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           IISAY+  G+  E+  LF  M+   ++    T V  L AC        G ++H+      
Sbjct: 190 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 249

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLEN--------------------------- 223
               + + NA+I MYA CG+M  A G+   + N                           
Sbjct: 250 VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFD 309

Query: 224 ----KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
               KD VSW +M+ G+++++ + +A++ FR +Q    KPD+   V+ ++A   LG L  
Sbjct: 310 KMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALEL 369

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +  Y  +    +DL + N L+DMY KC  V+    +F +M+ +D  +WT +I G A 
Sbjct: 370 GEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAV 429

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR----KGL-S 394
           N    KAL++F  +    +  D +    VL AC+    + + ++   Y +R     G+  
Sbjct: 430 NGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHGIEP 486

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMIS 435
           ++     +VD+  + G +  +  V E++  K + + W ++++
Sbjct: 487 NIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLA 528



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 163/372 (43%), Gaps = 40/372 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGISVD 57
           MY  CG +  A  +FD   +  V TWN ++ AY   G   E  R+       +VL  +V 
Sbjct: 162 MYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTV- 220

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FR 110
             T   V+ AC+ LKDL  G K+H  V  C  +S   + N+++ MYA C +       FR
Sbjct: 221 --TLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFR 278

Query: 111 K------------------------ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALG 146
                                    AR  FD+M EK D V W ++I  Y  S +  EAL 
Sbjct: 279 SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK-DYVSWTAMIDGYIRSNRFKEALE 337

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           LFR MQ   +  + +T V+ L AC       LG  I     ++     ++V NALI MY 
Sbjct: 338 LFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYF 397

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +CG + +A  +  ++  +D  +W +M+ G   N    KA+  F  +  A   PD++  + 
Sbjct: 398 KCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIG 457

Query: 267 AVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
            +SA    G +  G++       Q G   ++     L+D+ A+   +     V   M  +
Sbjct: 458 VLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIK 517

Query: 326 -DFISWTTIIAG 336
            + I W  ++AG
Sbjct: 518 ANSIVWGALLAG 529


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/740 (33%), Positives = 413/740 (55%), Gaps = 8/740 (1%)

Query: 2   YGKCGSVLDAEQLFDK--VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           Y   G + DA QLF +  +  R V  WN M+  +         L  + +M   G+     
Sbjct: 159 YISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRS 218

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V+ A A L  L+ G  +H   +K G++S+ ++ +SL+ MY KC     ARQ+FD +
Sbjct: 219 TLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAI 278

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +K ++++WN+++  YS +G     + LF +M   G+  + +T+ + L  C    +  +G
Sbjct: 279 SQK-NMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVG 337

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H+A +K      ++V NALI MYA+ G + EA      +  +D +SWN+++ G+VQ 
Sbjct: 338 RQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQE 397

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           ++   A   FR +   G  PD+V   + +SA G +  L  G++ H  ++K G  ++L  G
Sbjct: 398 EVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAG 457

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           ++L+DMY+KC  +    + +  M  +  +S   +IAGYA  N   +++ L   +Q+ GL 
Sbjct: 458 SSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTK-ESINLLHEMQILGLK 516

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRN 417
              +   S++  C G   +    +IH  I+++GL      +  +++ +Y     +  +  
Sbjct: 517 PSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANI 576

Query: 418 VFESIES-KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           +F    S K +V WT++IS ++ N  ++ AL L+  M + N+  D  T V+ L A + LS
Sbjct: 577 LFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLS 636

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
            L  G+E++  I   GF+L+   +S+LVDMYA+CG +  + +VF  + TK D+I W SMI
Sbjct: 637 SLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMI 696

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
                +G  K A+ +F +M      PD +TFL +L ACSH+G + EG++  ++M   Y +
Sbjct: 697 VGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGI 756

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           +P  +HYAC+VDLLGR   L+EA +F+  +++EP A +W  LLGACR+H +++ G+  AK
Sbjct: 757 EPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAK 816

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           KL+EL+P +   YVL+SN++AAS  W +   +R  M    ++K PG SWI +G + + F+
Sbjct: 817 KLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFV 876

Query: 716 ARDKSHSESDEIYKKLAEIT 735
           A D SHS  DEI K L  +T
Sbjct: 877 AGDISHSSYDEISKALKHLT 896



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 175/608 (28%), Positives = 312/608 (51%), Gaps = 18/608 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC    DA Q+FD +SQ+ +  WNAMLG Y  NG    V+E +  M   GI  D FT
Sbjct: 261 MYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFT 320

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++  CA  + L+ G ++H  ++K  + S  F+ N+L+ MYAK    ++A + F+ M 
Sbjct: 321 YTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMT 380

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D + WN+II  Y        A  LFR M   G+V +  +  + L AC +      G 
Sbjct: 381 YR-DHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQ 439

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H  +VK G    ++  ++LI MY++CG + +A      +  +  VS N+++ G+   +
Sbjct: 440 QFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN 499

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ-IG 299
              +++    E+Q  G KP ++   + +        ++ G ++H   +K+G +   + +G
Sbjct: 500 TK-ESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLG 558

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTA-QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            +L+ MY     +     +F + ++ +  + WT +I+G+ QN C   AL L+R ++   +
Sbjct: 559 TSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNI 618

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D     +VL AC+ L  +   +EIH  I   G   D +  +A+VD+Y KCG++  S  
Sbjct: 619 SPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQ 678

Query: 418 VFESIES-KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           VFE + + KDV+SW SMI  +  NG A  AL++F  M ++ +  D +T +  L+A S   
Sbjct: 679 VFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAG 738

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
            + +G+++   ++   + +E  V   + +VD+  R G L  A +  + ++ + + ++W +
Sbjct: 739 WVYEGRQIFDVMVNY-YGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWAN 797

Query: 534 MINANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM- 589
           ++ A  +HG   RG+ A     ++E +S +P     L+ +YA   SG  +E +     M 
Sbjct: 798 LLGACRIHGDEKRGQRAAKKLIELEPQSSSP--YVLLSNMYAA--SGNWDEARSLRRTMI 853

Query: 590 RCDYQLDP 597
           + D Q  P
Sbjct: 854 KKDIQKIP 861



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 171/646 (26%), Positives = 304/646 (47%), Gaps = 48/646 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFT--WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           +Y KC S+  A  +F       + T  W A++  YV  G P   L  + +MR   +  D 
Sbjct: 91  LYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVP-DQ 149

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
                V+ A   L  LD                                    A QLF +
Sbjct: 150 VALVTVLNAYISLGKLD-----------------------------------DACQLFQQ 174

Query: 119 MG-EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           M     +VV WN +IS ++ +    EAL  F +M + G+ ++  T  + L A    +   
Sbjct: 175 MPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALN 234

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G+ +HA  +K G    +YVA++LI MY +C    +A  V   +  K+ + WN+ML  + 
Sbjct: 235 HGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYS 294

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN      M+ F ++   G  PD+    + +S       L  G++LH+  IK+ F S+L 
Sbjct: 295 QNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLF 354

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N L+DMYAK   +   G+ F  MT +D ISW  II GY Q      A  LFR + L+G
Sbjct: 355 VNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDG 414

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +  D + + S+L AC  +K +   ++ H   ++ GL ++L   ++++D+Y KCG+I  + 
Sbjct: 415 IVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAH 474

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
             + S+  + VVS  ++I+ Y       E++ L + M    ++   IT  S +      +
Sbjct: 475 KTYSSMPERSVVSVNALIAGYALKN-TKESINLLHEMQILGLKPSEITFASLIDVCKGSA 533

Query: 477 ILKKGKELNGFIIRKGFNLEGS--VASSLVDMYARCGALDIANKVFNCVQT-KDLILWTS 533
            +  G +++  I+++G  L GS  + +SL+ MY     L  AN +F+   + K +++WT+
Sbjct: 534 KVILGLQIHCAIVKRGL-LCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTA 592

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCD 592
           +I+ +  +    VA++L+ +M   + +PD  TF+ +L AC+    +++G++    I    
Sbjct: 593 LISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTG 652

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           + LD      + LVD+  +   ++ + Q    +  +     W +++
Sbjct: 653 FDLDELTS--SALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMI 696



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 176/387 (45%), Gaps = 42/387 (10%)

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           + +QF+     +G  PDQ      +SA  +L NL  G+ +H+  IK G  S       L+
Sbjct: 30  RVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALI 89

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDF--ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
            +YAKC  +     +F          +SWT +I+GY Q     +AL +F  ++       
Sbjct: 90  HLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMR------- 142

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE- 420
                                          + D V L  +++ Y   G +D +  +F+ 
Sbjct: 143 ----------------------------NSAVPDQVALVTVLNAYISLGKLDDACQLFQQ 174

Query: 421 -SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I  ++VV+W  MIS +       EAL  F+ M++  V+S   TL S LSA +SL+ L 
Sbjct: 175 MPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALN 234

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G  ++   I++GF     VASSL++MY +C   D A +VF+ +  K++I+W +M+    
Sbjct: 235 HGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYS 294

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPW 598
            +G     ++LF  M +    PD  T+ ++L  C+    +  G++    I++  +  + +
Sbjct: 295 QNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLF 354

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSM 625
             +   L+D+  +A  L+EA +    M
Sbjct: 355 VNN--ALIDMYAKAGALKEAGKHFEHM 379


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/706 (35%), Positives = 396/706 (56%), Gaps = 11/706 (1%)

Query: 53  GISVDAFTF-PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
           G  V+ F F PC+IKA   L D++ G +IHG +LK G+    F+ NSL+ MY KC     
Sbjct: 33  GFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGN 92

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV--GLVTNAYTFVAALQA 169
           A  +F+RM E+ D V WN++IS +  SG  +++L +FR M +   G   N    +AAL +
Sbjct: 93  AVDMFERM-EERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSS 151

Query: 170 CEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS- 228
           C      T G+EIH   VK G +   ++ +ALI MY +CG +  A  V  ++ + + V  
Sbjct: 152 CASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGR 211

Query: 229 ----WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
               WN M+ G+V N+    A++ F E+   G  PD    V  +    +L +L  GK++H
Sbjct: 212 NMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIH 271

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
              +  G   D+++G  LM+MY KC       ++F +    + + W +++   AQN    
Sbjct: 272 GLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPN 331

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIV 403
           +ALE F    L+    D +I+ + L ACS L    +   IHG+ I+ G  SD+ +  A+V
Sbjct: 332 EALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALV 391

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           D YGKCG+++Y++ VF  + ++D+VSW ++IS +  N  A+EAL+ F  M    ++ +++
Sbjct: 392 DFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTV 451

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T+   LS  + LS++   KE++ +++R  F     V +SL+  YA+CG +  +  VF  +
Sbjct: 452 TMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKL 511

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
             ++ + W S++   G+HGR       F KM+  +  PDH TF +LL +CSHSG ++ G 
Sbjct: 512 PVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGW 571

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRV 643
           K+   M  DY L+P  E Y C+VDLLGRA +L +AY  + SM   P   +W +LL +C+ 
Sbjct: 572 KYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKN 631

Query: 644 HSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
           H N +L E+VA  + ELD  + G  VL++N++  S    +V +VR  ++  GLKK PG S
Sbjct: 632 HGNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCS 691

Query: 704 WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
           WIE+ N IH F+A D SH  S +IY  +  ++ +++R  GYV   Q
Sbjct: 692 WIEVDNSIHIFVAGDYSHDRSGDIYATIESLSLEMKRV-GYVPHIQ 736



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 185/596 (31%), Positives = 315/596 (52%), Gaps = 22/596 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM--RVLGISVDA 58
           MY KCG+  +A  +F+++ +R   +WN M+  +  +G+ ++ L  + RM     G   + 
Sbjct: 83  MYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNR 142

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
                 + +CA +K L  G +IHG ++K G DS +F+V++L+ MY KC D + A  +F+R
Sbjct: 143 VACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFER 202

Query: 119 MGEKE----DVVLWNSIISAYSASGQCLE-ALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           + + E    ++ +WN +I  Y  S +CL  AL LF EM  +G+  ++ T V  L  C   
Sbjct: 203 IRDNELVGRNMAVWNVMILGY-VSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQL 261

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
               +G +IH   +  G +  V V  AL+ MY +CG    +  +  + +N + V W S++
Sbjct: 262 LDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVM 321

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
               QN    +A++FF E       PD V  + A+ A   L     G  +H +AIK GF 
Sbjct: 322 LNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFD 381

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           SD+ +G  L+D Y KC  + Y  +VFY ++ +D +SW  +I+G+AQN C  +AL+ FR +
Sbjct: 382 SDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDM 441

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
           Q + +  + + +  +L  C+ L  M   KE+H Y++R    ++ ++ N+++  Y KCG+I
Sbjct: 442 QSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDI 501

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             SR VFE +  ++ V+W S++  +  +G  +E    F  M EAN++ D  T  S LS+ 
Sbjct: 502 HSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSC 561

Query: 473 SSLSILKKG-KELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQTKDL 528
           S    +  G K  N  +  + +NLE  V   + +VD+  R G L+ A + + +   + D 
Sbjct: 562 SHSGKVDAGWKYFNSMM--EDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDD 619

Query: 529 ILWTSMINANGLHGRGKVA---IDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +W S++ +   HG  K+A    +  ++++A S    +   LA LY    SG +NE
Sbjct: 620 RIWGSLLASCKNHGNTKLAEVVANHIFELDASSVG--YRVLLANLY--EDSGNLNE 671


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/735 (34%), Positives = 393/735 (53%), Gaps = 77/735 (10%)

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLT 234
           TL  ++    V    +     A +L++ YA  G++ ++A       +  +D+V  N+M++
Sbjct: 71  TLSPDLATPAVLFRADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMIS 130

Query: 235 GFVQNDLYCKAMQFFRELQGAGQ--KPDQVCTVNAVSASGRLGNLL--NGKELHAYAIKQ 290
            F +  L   A+  FR L  +    +PD     + +SA G++ +L   +  +LH    K 
Sbjct: 131 AFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKL 190

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMG---RVFYQMTAQDFISWTTI-------------- 333
           G  + L + N L+ +Y KC          +V  +M  +D ++WTTI              
Sbjct: 191 GAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAAR 250

Query: 334 -----------------IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
                            I+GY Q+    +A ELFR +  + +  D     S+L AC+   
Sbjct: 251 SAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAG 310

Query: 377 CMSQTKEIHGYIIRKGL-----SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
                K +HG  IR        + L + NA+V +Y K G I  +  +F+S+  KDVVSW 
Sbjct: 311 FFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWN 370

Query: 432 S-------------------------------MISSYVHNGLANEALELFYLMNEANVES 460
           +                               M+S YVH GLA +AL+LF  M   +V+ 
Sbjct: 371 TILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKP 430

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
              T   A++A   L  LK GK+L+  +++ GF    S  ++L+ MYARCGA+  A  VF
Sbjct: 431 CDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVF 490

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
             +   D + W +MI+A G HG G+ A++LF +M A+   PD I+FL +L AC+H+GL++
Sbjct: 491 LVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVD 550

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           +G ++ E M  D+ + P  +HYA L+DLLGRA  + EA   +++M  EPT  +W A+L  
Sbjct: 551 DGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSG 610

Query: 641 CRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTP 700
           CR++ + ELG   A +L ++ P + G Y+L+SN ++A+ +W D  +VR  MR  G+KK P
Sbjct: 611 CRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEP 670

Query: 701 GSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEK 760
           G SWIE+GNK+H F+  D  H ++ E+Y+ L  +  K+ R+ GYV  T+F L ++   EK
Sbjct: 671 GCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKM-RKLGYVPDTKFALQDMAPHEK 729

Query: 761 VQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANR 820
             +L+ HSERLA+++G+LK   G+ + + KNL++C DCH+    +SR  GRE+VVRD  R
Sbjct: 730 EYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRR 789

Query: 821 FHHFEAGVCSCGDYW 835
           FHHF+ G CSCG+YW
Sbjct: 790 FHHFKDGECSCGNYW 804



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 258/604 (42%), Gaps = 107/604 (17%)

Query: 2   YGKCGSVLDAEQLFD--KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV--D 57
           Y   G + D+   FD   V++R     NAM+ A+         +  +  +     S+  D
Sbjct: 99  YAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPD 158

Query: 58  AFTFPCVIKACAMLKDLDCG--AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD---FRKA 112
            ++F  ++ A   + DL      ++H  V K G  +   + N+L+A+Y KC      R A
Sbjct: 159 DYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDA 218

Query: 113 RQLFDRMGEKEDV------------------------------VLWNSIISAYSASGQCL 142
           R++ D M EK+++                              V+WN++IS Y  SG C 
Sbjct: 219 RKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCA 278

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL----QVYVA 198
           EA  LFR M    +  + +TF + L AC ++ F   G  +H   ++   +      + V 
Sbjct: 279 EAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVN 338

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNS--------------------------- 231
           NAL+ +Y++ GK+  A  +   +  KD VSWN+                           
Sbjct: 339 NALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSEL 398

Query: 232 ----MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
               M++G+V   L   A++ F +++    KP       AV+A G LG L +GK+LHA+ 
Sbjct: 399 SWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHL 458

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           ++ GF +    GN L+ MYA+C  V     VF  M   D +SW  +I+   Q+    +AL
Sbjct: 459 VQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREAL 518

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILN 400
           ELF  +  +G+  D +   ++L AC+       G +     +   G  I  G      L 
Sbjct: 519 ELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFG--ISPGEDHYARL- 575

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISSYVHNGL----ANEALELFYLMNE 455
             +D+ G+ G I  +R++ +++  +   + W +++S    NG     A  A +LF ++ E
Sbjct: 576 --IDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPE 633

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
              +   I L +  SAA        G+ ++   +RK     G      V     C  +++
Sbjct: 634 H--DGTYILLSNTYSAA--------GRWVDAARVRKLMRDRG------VKKEPGCSWIEV 677

Query: 516 ANKV 519
            NKV
Sbjct: 678 GNKV 681



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 144/584 (24%), Positives = 257/584 (44%), Gaps = 90/584 (15%)

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMG-EKEDVVLWNSIISAYSASGQCLEALGLF 148
           D       SLV+ YA     R +   FD +   + D VL N++ISA++ +     A+ +F
Sbjct: 86  DPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVF 145

Query: 149 REM--QRVGLVTNAYTFVAALQACEDSSFETLGM----EIHAATVKSGQNLQVYVANALI 202
           R +      L  + Y+F + L A        L +    ++H A  K G    + V+NALI
Sbjct: 146 RSLLASDDSLRPDDYSFTSLLSAV--GQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALI 203

Query: 203 AMYARC---GKMTEAAGVLYQLENKDSVS------------------------------- 228
           A+Y +C   G   +A  VL ++  KD ++                               
Sbjct: 204 ALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVV 263

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           WN+M++G+VQ+ +  +A + FR +      PD+    + +SA    G  L+GK +H   I
Sbjct: 264 WNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFI 323

Query: 289 K--QGFVSD--LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
           +    FV +  L + N L+ +Y+K   +    ++F  MT +D +SW TI++GY ++ C  
Sbjct: 324 RLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLD 383

Query: 345 KALELFRTVQLEG-LDADVMIIGSV------------------------------LMACS 373
            A  +F+ +  +  L   VM+ G V                              + AC 
Sbjct: 384 NAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACG 443

Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L  +   K++H ++++ G  +     NA++ +Y +CG +  +R VF  + + D VSW +
Sbjct: 444 ELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNA 503

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK- 491
           MIS+   +G   EALELF  M    +  D I+ ++ L+A +   ++  G +    + R  
Sbjct: 504 MISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDF 563

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMINA---NGLHGRGKVA 547
           G +      + L+D+  R G +  A  +   +  +    +W ++++    NG    G  A
Sbjct: 564 GISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYA 623

Query: 548 IDLFYKMEAESFAPDHI-TFLALLYACSHSGLINEGKKFLEIMR 590
            D  +KM      P+H  T++ L    S +G   +  +  ++MR
Sbjct: 624 ADQLFKM-----VPEHDGTYILLSNTYSAAGRWVDAARVRKLMR 662



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 125/272 (45%), Gaps = 42/272 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG-----------EPLR-------- 41
           +Y K G +  A ++FD ++ + V +WN +L  Y+ +G            P +        
Sbjct: 344 LYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVM 403

Query: 42  ------------VLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                        L+ +++MR   +    +T+   + AC  L  L  G ++H  +++CG+
Sbjct: 404 VSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGF 463

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           ++++   N+L+ MYA+C   + AR +F  M    D V WN++ISA    G   EAL LF 
Sbjct: 464 EASNSAGNALLTMYARCGAVKDARLVFLVM-PNVDSVSWNAMISALGQHGHGREALELFD 522

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT-----VKSGQNLQVYVANALIAM 204
           +M   G+  +  +F+  L AC  +     G +   +      +  G++        LI +
Sbjct: 523 QMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYAR----LIDL 578

Query: 205 YARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
             R G++ EA  ++  +  + + + W ++L+G
Sbjct: 579 LGRAGRIGEARDLIKTMPFEPTPAIWEAILSG 610



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 1/141 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG+V DA  +F  +      +WNAM+ A   +G     LE + +M   GI  D  +
Sbjct: 476 MYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRIS 535

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC     +D G +    +    G    +     L+ +  +     +AR L   M
Sbjct: 536 FLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTM 595

Query: 120 GEKEDVVLWNSIISAYSASGQ 140
             +    +W +I+S    +G 
Sbjct: 596 PFEPTPAIWEAILSGCRINGD 616


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 249/709 (35%), Positives = 383/709 (54%), Gaps = 76/709 (10%)

Query: 198 ANALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           A +L+A  A  G++ +AA     +    +D+V  N+M++ F +  L   A+  F  L G+
Sbjct: 95  ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154

Query: 256 GQ-KPDQVCTVNAVSASGRLGNLLNG--KELHAYAIKQGFVSDLQIGNTLMDMYAKC--- 309
           G  +PD       +SA G++ NL      +LH   +K G  + L + N L+ +Y KC   
Sbjct: 155 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 214

Query: 310 -----------------------CCVNYMGR--------VFYQMTAQDFISWTTIIAGYA 338
                                    V Y+ R        VF ++  +  + W  +I+GY 
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL----- 393
           Q+     A ELFR +  E +  D     SVL AC+        K +HG IIR        
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS--------------------- 432
           + L + NA+V +Y K G I  ++ +F+++  KDVVSW +                     
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 394

Query: 433 ----------MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
                     M+S YVH GL+ +AL+LF  M   +V+    T   A++A   L  LK G+
Sbjct: 395 PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGR 454

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           +L+  +++ GF    S  ++L+ MYA+CGA++ A  VF  +   D + W +MI+A G HG
Sbjct: 455 QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHG 514

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
            G+ A++LF +M AE   PD I+FL +L AC+H+GL++EG  + E M+ D+ + P  +HY
Sbjct: 515 HGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 574

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
           A L+DLLGR+  + EA   +++M  EPT  +W A+L  CR + + E G   A +L  + P
Sbjct: 575 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 634

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
            + G Y+L+SN ++A+ +W D  +VR  MR  G+KK PG SWIE+G+KIH F+  D  H 
Sbjct: 635 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHP 694

Query: 723 ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE 782
           E+ E+Y+ L  I  ++ R+ GYV  T+FVLH++E  EK  +L+ HSE+LA+ +G+LK   
Sbjct: 695 EAQEVYQFLEVIGARM-RKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPP 753

Query: 783 GSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           G+ + + KNLR+C DCH+    +S+  GRE+VVRD  RFHHF+ G CSC
Sbjct: 754 GATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 230/517 (44%), Gaps = 86/517 (16%)

Query: 6   GSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFTFP 62
           G + DA   FD V  ++R     NAM+ A+         +  +  +   G +  D ++F 
Sbjct: 106 GRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFT 165

Query: 63  CVIKACAMLKDLDCG--AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR---KARQLFD 117
            +I A   + +L      ++H  VLK G  +   + N+L+A+Y KC        AR++ D
Sbjct: 166 ALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLD 225

Query: 118 RMGEKEDV------------------------------VLWNSIISAYSASGQCLEALGL 147
            M +K+D+                              V+WN++IS Y  SG C +A  L
Sbjct: 226 EMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFEL 285

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL----QVYVANALIA 203
           FR M    +  + +TF + L AC ++ F   G  +H   ++   N      + V NAL+ 
Sbjct: 286 FRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVT 345

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV-----------------QNDLYC--- 243
           +Y++ GK+  A  +   +  KD VSWN++L+G++                 +NDL     
Sbjct: 346 LYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVM 405

Query: 244 -----------KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
                       A++ F +++    KP       A++A G LG L +G++LHA+ ++ GF
Sbjct: 406 VSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGF 465

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            +    GN L+ MYAKC  VN    VF  M   D +SW  +I+   Q+    +ALELF  
Sbjct: 466 EASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQ 525

Query: 353 VQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDV 405
           +  EG+D D +   ++L AC+       G       K   G  I  G      L   +D+
Sbjct: 526 MVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFG--ISPGEDHYARL---IDL 580

Query: 406 YGKCGNIDYSRNVFESIESKDVVS-WTSMISSYVHNG 441
            G+ G I  +R++ +++  +   S W +++S    NG
Sbjct: 581 LGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 617



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 151/615 (24%), Positives = 271/615 (44%), Gaps = 96/615 (15%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGE-KEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            SLVA  A     R A   FD +   + D VL N+++SA++ +     A+ +F  +   G
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 156 -LVTNAYTFVAALQACEDSSFETLG----MEIHAATVKSGQNLQVYVANALIAMYARC-- 208
            L  + Y+F A + A        L      ++H + +KSG    + V+NALIA+Y +C  
Sbjct: 156 SLRPDDYSFTALISAV--GQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDT 213

Query: 209 --------------------------------GKMTEAAGVLYQLENKDSVSWNSMLTGF 236
                                           G +  A  V  +++ K  V WN+M++G+
Sbjct: 214 PEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGY 273

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK--QGFVS 294
           VQ+ +   A + FR +       D+    + +SA    G  ++GK +H   I+    FV 
Sbjct: 274 VQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVP 333

Query: 295 D--LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
           +  L + N L+ +Y+K   +    R+F  M  +D +SW TI++GY  + C  KA+E+F+ 
Sbjct: 334 EAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKV 393

Query: 353 VQLE---------------GLDADVMII----------------GSVLMACSGLKCMSQT 381
           +  +               GL  D + +                   + AC  L  +   
Sbjct: 394 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 453

Query: 382 KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
           +++H ++++ G  +     NA++ +Y KCG ++ +R VF  + + D VSW +MIS+   +
Sbjct: 454 RQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQH 513

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSV 499
           G   EALELF  M    ++ D I+ ++ L+A +   ++ +G      + R  G +     
Sbjct: 514 GHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDH 573

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINA---NGLHGRGKVAIDLFYKME 555
            + L+D+  R G +  A  +   +  +    +W ++++    NG    G  A D  ++M 
Sbjct: 574 YARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRM- 632

Query: 556 AESFAPDHI-TFLALLYACSHSGLINEGKKFLEIMR-CDYQLDP---WPEHYACL-VDLL 609
                P H  T++ L    S +G   +  +  ++MR    + +P   W E  + + V L+
Sbjct: 633 ----IPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLV 688

Query: 610 GRANHLE--EAYQFV 622
           G   H E  E YQF+
Sbjct: 689 GDTKHPEAQEVYQFL 703



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 181/407 (44%), Gaps = 68/407 (16%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G V  A  +F++V  +    WNAM+  YV +G      E + RM    + +D FTF
Sbjct: 242 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 301

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-------NSLVAMYAKCYDFRKARQ 114
             V+ ACA       G  +HG +++      +F+        N+LV +Y+K      A++
Sbjct: 302 TSVLSACANAGFFVHGKSVHGQIIRL---QPNFVPEAALPVNNALVTLYSKGGKIVIAKR 358

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCL-------------------------------- 142
           +FD M  K DVV WN+I+S Y  SG CL                                
Sbjct: 359 IFDTMNLK-DVVSWNTILSGYIDSG-CLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSE 416

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           +AL LF +M+   +    YT+  A+ AC +      G ++HA  V+ G        NAL+
Sbjct: 417 DALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALL 476

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
            MYA+CG + +A  V   + N DSVSWN+M++   Q+    +A++ F ++   G  PD++
Sbjct: 477 TMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRI 536

Query: 263 CTVNAVSASGRLGNLLNGKELHAY-AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
             +  ++A    G +  G   H + ++K+ F   +  G    D YA+   ++ +GR    
Sbjct: 537 SFLTILTACNHAGLVDEG--FHYFESMKRDF--GISPGE---DHYAR--LIDLLGRSGRI 587

Query: 322 MTAQDFIS----------WTTIIAGYAQNN----CHLKALELFRTVQ 354
             A+D I           W  I++G   N         A +LFR + 
Sbjct: 588 GEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 634



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 144/317 (45%), Gaps = 54/317 (17%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG------EPLRV------------ 42
           +Y K G ++ A+++FD ++ + V +WN +L  Y+ +G      E  +V            
Sbjct: 346 LYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVM 405

Query: 43  -------------LETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                        L+ +++MR   +    +T+   I AC  L  L  G ++H  +++CG+
Sbjct: 406 VSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGF 465

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           ++++   N+L+ MYAKC     AR +F  M    D V WN++ISA    G   EAL LF 
Sbjct: 466 EASNSAGNALLTMYAKCGAVNDARLVFLVM-PNLDSVSWNAMISALGQHGHGREALELFD 524

Query: 150 EMQRVGLVTNAYTFVAALQACEDSS--------FETLGMEIHAATVKSGQNLQVYVANAL 201
           +M   G+  +  +F+  L AC  +         FE++  +     +  G++        L
Sbjct: 525 QMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDF---GISPGEDHYAR----L 577

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTGFVQN-DLYCKAM---QFFRELQGAG 256
           I +  R G++ EA  ++  +  + + S W ++L+G   N D+   A    Q FR +    
Sbjct: 578 IDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP--Q 635

Query: 257 QKPDQVCTVNAVSASGR 273
                +   N  SA+GR
Sbjct: 636 HDGTYILLSNTYSAAGR 652


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 271/912 (29%), Positives = 443/912 (48%), Gaps = 117/912 (12%)

Query: 7    SVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIK 66
            S+ DA +L D++  RTV  + A++ +Y  + +   +   +  M   G+  D +  P ++K
Sbjct: 132  SLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILK 191

Query: 67   ACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM------- 119
            AC+ +     G  +HG V++   +S  F+ N+L+  Y+ C D   +R +F  M       
Sbjct: 192  ACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVS 251

Query: 120  ---------------------------GEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
                                       G K D++ W++++S ++ +G+   AL    EM 
Sbjct: 252  WTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMP 311

Query: 153  RVGL--------------VTNAY---------------------TFVAALQACEDSSFET 177
              GL              V N Y                     T  + L AC       
Sbjct: 312  ERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALR 371

Query: 178  LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            LG  IH    K G    VYV  ++I MY++CG    A  V  + ENK++  WN M+  +V
Sbjct: 372  LGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYV 431

Query: 238  QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
                   A+   R +Q  G KPD +     +S   R G      EL +  ++ G   ++ 
Sbjct: 432  NEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNV- 490

Query: 298  IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
                                          +S+  +I+G+ Q+    +AL++FR +Q   
Sbjct: 491  ------------------------------VSFNVLISGFQQSGLSYEALKVFRIMQSPS 520

Query: 358  ------------LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVD 404
                        +  + + I   L AC+ L    Q KEIHGY +R G   ++ + +A+VD
Sbjct: 521  DGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVD 580

Query: 405  VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
            +Y KC ++D +  VF  I+ ++ VSW ++++ Y++N    EAL+LF  M    ++  SIT
Sbjct: 581  MYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSIT 640

Query: 465  LVSALSAASSLSILKKGKELNGFIIRKGFN-LEGSVASSLVDMYARCGALDIANKVFNCV 523
             +    A   ++ ++ G+ L+G+  +   + L+ ++ S+L+DMYA+CG++  A  VF+  
Sbjct: 641  FMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSE 700

Query: 524  QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
              KD+ LW +MI+A  +HG  + A  +F +ME     PDHITF++LL AC+  GL+ EG 
Sbjct: 701  VEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGW 760

Query: 584  KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRV 643
            K+   M   Y +    EHY C+V +LG A  L+EA  F+R M   P A +W  LL ACRV
Sbjct: 761  KYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRV 820

Query: 644  HSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
            HSN E+GE  AK L EL+P N  NY+L+SN++ +S  W   + +R  MRG  L      S
Sbjct: 821  HSNPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECS 880

Query: 704  WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
            ++ +G+   +F   + SH E +EI +    +  K+E  G +     F   + EE+E    
Sbjct: 881  YLTVGSHXCTFKGGESSHPELEEILETWDXLARKMELSGYFPLDPVF---DDEEKELDPF 937

Query: 764  LYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHH 823
               H+E+LAI +G++ S     + ++KN+R+C+DCH+  KL+S++ GRE+ V+D   +HH
Sbjct: 938  SCLHTEKLAICFGIISSNXYRPVHVSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHH 997

Query: 824  FEAGVCSCGDYW 835
             + G+C C D W
Sbjct: 998  MKDGICXCQDRW 1009



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 235/526 (44%), Gaps = 61/526 (11%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCG---YDSTDFIVNSLVAMYAKC-YDFRKARQLFDRM 119
           ++  C+ L +     +IH  V+K     + S+  I N LV +Y K  +    AR+L D +
Sbjct: 89  LLNRCSTLSEF---RQIHARVVKLNALKWKSS--IGNKLVVLYCKNQWSLEDARKLLDEI 143

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             +  V  + ++I +Y  S Q  E    FR M   G++ + Y     L+AC       +G
Sbjct: 144 PNRT-VPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIG 202

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   ++      V+V NALI  Y+ CG +  +  V + ++ +D VSW ++++ +++ 
Sbjct: 203 KMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEE 262

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L  +A   F  +Q  G KPD +     +S   R G +                 DL + 
Sbjct: 263 GLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEI-----------------DLAL- 304

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            TL +M  +            Q T     SW  II+G  QN     AL++F  +     D
Sbjct: 305 ETLEEMPERG----------LQPTVN---SWNGIISGCVQNGYLEDALDMFSRMLWYPED 351

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            +++ I S+L AC+GLK +   K IH    + G+  ++ +  +++D+Y KCG+ DY+  V
Sbjct: 352 PNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKV 411

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F   E+K+   W  MI++YV+ G   +AL L   M +   + D IT  + LS  +   + 
Sbjct: 412 FXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLK 471

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            +  EL   +++ G        + L+  + + G    A KVF  +Q+      +   N N
Sbjct: 472 TQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSP-----SDGCNPN 526

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            +       ++L       S  P+ IT    L AC+   L  +GK+
Sbjct: 527 EV-------LNL-------SMRPNPITITGALPACADLNLWCQGKE 558



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 184/390 (47%), Gaps = 53/390 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS   AE++F K   +    WN M+ AYV+ G+    L     M+  G   D  T
Sbjct: 398 MYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVIT 457

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD--- 117
           +                                   N++++ +A+     +A +L     
Sbjct: 458 Y-----------------------------------NTILSGHARNGLKTQAXELLSEMV 482

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ------------RVGLVTNAYTFVA 165
           +MG K +VV +N +IS +  SG   EAL +FR MQ             + +  N  T   
Sbjct: 483 QMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITG 542

Query: 166 ALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD 225
           AL AC D +    G EIH  T+++G    ++V++AL+ MYA+C  M  A  V ++++ ++
Sbjct: 543 ALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRN 602

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           +VSWN+++ G++ N    +A++ F E+ G G +P  +  +    A G +  +  G+ LH 
Sbjct: 603 TVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHG 662

Query: 286 YAIKQGFVSDLQ--IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           YA K   + +L+  I + L+DMYAKC  +     VF     +D   W  +I+ ++ +   
Sbjct: 663 YAAKCQ-LDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMA 721

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACS 373
             A  +F  ++L G+  D +   S+L AC+
Sbjct: 722 RNAFAVFXQMELLGIXPDHITFVSLLSACA 751



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 4/236 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  A ++F ++  R   +WNA++  Y++N +P   L+ +  M   G+   + T
Sbjct: 581 MYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSIT 640

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDS-TDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  +  AC  +  +  G  +HG   KC  D   + I ++L+ MYAKC     A+ +FD  
Sbjct: 641 FMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSE 700

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC-EDSSFETL 178
            EK DV LWN++ISA+S  G    A  +F +M+ +G+  +  TFV+ L AC  D   E  
Sbjct: 701 VEK-DVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEG 759

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
               ++  +  G    +     ++ +    G + EA   + Q+    D+  W ++L
Sbjct: 760 WKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLL 815



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 164/353 (46%), Gaps = 24/353 (6%)

Query: 317 RVFYQMTAQDFISWTTIIAGYAQ-----NNCHLKAL-ELFRTVQLEGLDADVMIIGSVLM 370
           R F+ +    F   T  I G+       N+ H + L   F          ++    S+L 
Sbjct: 32  RNFFPLPKSKFRVSTPRIIGFKHYSTVSNHIHPQTLLPSFVDTLTNSSPTEISDSISLLN 91

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLSDL----VILNAIVDVYGKCGN---IDYSRNVFESIE 423
            CS L   S+ ++IH  +++  L+ L     I N +V +Y  C N   ++ +R + + I 
Sbjct: 92  RCSTL---SEFRQIHARVVK--LNALKWKSSIGNKLVVLY--CKNQWSLEDARKLLDEIP 144

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
           ++ V ++ ++I SY  +   +E    F LM    +  D   + + L A S++ + + GK 
Sbjct: 145 NRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKM 204

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++GF+IRK    +  V ++L+  Y+ CG L  +  VF+ +Q +D++ WT++I+A    G 
Sbjct: 205 VHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGL 264

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
              A  +F+ M+ +   PD I++ ALL   + +G I+   + LE M  +  L P    + 
Sbjct: 265 XDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMP-ERGLQPTVNSWN 323

Query: 604 CLVDLLGRANHLEEAYQFVRSM---QIEPTAEVWCALLGACRVHSNKELGEIV 653
            ++    +  +LE+A      M     +P      ++L AC       LG+ +
Sbjct: 324 GIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAI 376



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+LDA+ +FD   ++ V  WNAM+ A+  +G        + +M +LGI  D  T
Sbjct: 683 MYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHIT 742

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ ACA    ++ G K  + + +  G  +T      +V +        +A     +M
Sbjct: 743 FVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQM 802

Query: 120 GEKEDVVLWNSIISA 134
               D  +W +++ A
Sbjct: 803 PYPPDACMWATLLQA 817


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/691 (35%), Positives = 399/691 (57%), Gaps = 4/691 (0%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
            + + T+  +I AC+ L+ L+ G KIH  +L C Y     + N +++MY KC   ++AR 
Sbjct: 95  PLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARN 154

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           +FD M  K +VV W S+IS YS  G+   A+ L+ +M R G + + +TF + +++C    
Sbjct: 155 MFDSMPLK-NVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLD 213

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
              L  ++HA  +KS     +   NALI+MY +  +M +A  V  ++  KD +SW SM+ 
Sbjct: 214 DFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIA 273

Query: 235 GFVQNDLYCKAMQFFRE-LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           GF Q     +A+  FRE L  +  +P++    +A SA  +L     G+++H   IK G  
Sbjct: 274 GFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLG 333

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           SDL  G +L DMYAKC  +     VFY +   D ++W  IIAG+A  +   ++   F  +
Sbjct: 334 SDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQM 393

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
           +  GL  + + + S+L ACS    ++   ++H YI++ G + D+ + N+++ +Y KC N+
Sbjct: 394 RHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNL 453

Query: 413 DYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           + +  VFE I +K D+VSW +++++ +    A E L L  LM  + ++ D +TL + L +
Sbjct: 454 NDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVS 513

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
           +  ++  + G +++ FI++ G NL+ SV+++L++MY +CG+L+ A K+F+ +   D+I W
Sbjct: 514 SGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISW 573

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
           +S+I      G GK A +LF  M      P+ ITF+ +L ACSH G++ EG K    M+ 
Sbjct: 574 SSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQE 633

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
           DY++ P  EH +C+VDLL RA  L+ A  F++ M   P   VW  LL AC+VH N E+G+
Sbjct: 634 DYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGK 693

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
             A+ +L++DP N    V++ N+ A+S  WKD  ++R  MR   + K PG SWIEI +K+
Sbjct: 694 RAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKV 753

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREG 742
           H F+A D  H E  +IY  L E+  ++  +G
Sbjct: 754 HVFLAEDNLHPERGKIYTMLEELMLQILDDG 784



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 171/569 (30%), Positives = 301/569 (52%), Gaps = 11/569 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ +A  +FD +  + V +W +M+  Y   GE    +  Y +M   G   D FT
Sbjct: 142 MYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFT 201

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++K+C+ L D     ++H  VLK  + +     N+L++MY K      A  +F R+ 
Sbjct: 202 FGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRII 261

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
            K D++ W S+I+ +S  G  LEAL  FREM    +   N + F +A  AC        G
Sbjct: 262 IK-DLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH   +K G    ++   +L  MYA+CG +  A  V Y +E  D V+WN+++ GF   
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV 380

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               ++  FF +++  G  P+ V  ++ + A      L +G ++H+Y +K GF  D+ + 
Sbjct: 381 SNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVC 440

Query: 300 NTLMDMYAKCCCVNYMGRVFYQM-TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           N+L+ MY+KC  +N   +VF  +    D +SW T++    Q N   + L L + +    +
Sbjct: 441 NSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRI 500

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D + + +VL++   +       +IH +I++ GL+ D+ + NA++++Y KCG+++ +R 
Sbjct: 501 KPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARK 560

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F+SI + D++SW+S+I  Y   G   EA ELF  M    V+ + IT V  L+A S + +
Sbjct: 561 MFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGM 620

Query: 478 LKKGKELNGFIIRKGFNLEGSV--ASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSM 534
           +++G +L    +++ + +  +    S +VD+ AR G LD+A      +    D+++W ++
Sbjct: 621 VEEGLKLYR-TMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTL 679

Query: 535 INANGLHGR---GKVAIDLFYKMEAESFA 560
           + A  +HG    GK A +   K++  + A
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKIDPSNSA 708



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 229/474 (48%), Gaps = 17/474 (3%)

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           +    + +L+ +A++ F   Q     P   V   + ++A   L +L +G+++H + +   
Sbjct: 69  IISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCN 128

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           +  D+ + N ++ MY KC  +     +F  M  ++ +SWT++I+GY++      A+ L+ 
Sbjct: 129 YQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYV 188

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
            +   G   D    GS++ +CSGL      +++H ++++    +DL+  NA++ +Y K  
Sbjct: 189 QMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFS 248

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSAL 469
            +  + NVF  I  KD++SW SMI+ +   G   EAL  F  +++++  + +     SA 
Sbjct: 249 QMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAF 308

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           SA S L     G++++G  I+ G   +     SL DMYA+CG L+ A  VF  ++  DL+
Sbjct: 309 SACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLV 368

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-I 588
            W ++I         K +   F +M      P+ +T L+LL ACS   ++N G +    I
Sbjct: 369 AWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYI 428

Query: 589 MRCDYQLD-PWPEHYAC--LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
           ++  + LD P      C  L+ +  + ++L +A Q    +  +     W  LL AC    
Sbjct: 429 VKMGFNLDIP-----VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACL--Q 481

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE---QVRMRMRGSGL 696
             + GE++    L        ++V ++NV  +S +    E   Q+   +  SGL
Sbjct: 482 QNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGL 535


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/683 (35%), Positives = 395/683 (57%), Gaps = 4/683 (0%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
            + + T+  +I AC+ L+ L+ G KIH  +L C Y     + N +++MY KC   ++AR 
Sbjct: 95  PLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARN 154

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           +FD M  K +VV W S+IS YS  G+   A+ L+ +M R G + + +TF + +++C    
Sbjct: 155 MFDSMPLK-NVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLD 213

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
              L  ++HA  +KS     +   NALI+MY +  +M +A  V  ++  KD +SW SM+ 
Sbjct: 214 DFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIA 273

Query: 235 GFVQNDLYCKAMQFFRE-LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           GF Q     +A+  FRE L  +  +P++    +A SA  +L     G+++H   IK G  
Sbjct: 274 GFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLG 333

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           SDL  G +L DMYAKC  +     VFY +   D ++W  IIAG+A  +   ++   F  +
Sbjct: 334 SDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQM 393

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
           +  GL  + + + S+L ACS    ++   ++H YI++ G + D+ + N+++ +Y KC N+
Sbjct: 394 RHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNL 453

Query: 413 DYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           + +  VFE I +K D+VSW +++++ +    A E L L  LM  + ++ D +TL + L +
Sbjct: 454 NDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVS 513

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
           +  ++  + G +++ FI++ G NL+ SV+++L++MY +CG+L+ A K+F+ +   D+I W
Sbjct: 514 SGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISW 573

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
           +S+I      G GK A +LF  M      P+ ITF+ +L ACSH G++ EG K    M+ 
Sbjct: 574 SSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQE 633

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
           DY++ P  EH +C+VDLL RA  L+ A  F+R M   P   VW  LL AC+VH N E+G+
Sbjct: 634 DYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGK 693

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
             A+ +L++DP N    V++ N+ A+S  WKD  ++R  MR   + K PG SWIEI +K+
Sbjct: 694 RAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKV 753

Query: 712 HSFIARDKSHSESDEIYKKLAEI 734
           H F+A D  H E  +IY  L E+
Sbjct: 754 HVFLAEDNLHPERGKIYTMLEEL 776



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 171/569 (30%), Positives = 301/569 (52%), Gaps = 11/569 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ +A  +FD +  + V +W +M+  Y   GE    +  Y +M   G   D FT
Sbjct: 142 MYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFT 201

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++K+C+ L D     ++H  VLK  + +     N+L++MY K      A  +F R+ 
Sbjct: 202 FGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRII 261

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
            K D++ W S+I+ +S  G  LEAL  FREM    +   N + F +A  AC        G
Sbjct: 262 IK-DLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH   +K G    ++   +L  MYA+CG +  A  V Y +E  D V+WN+++ GF   
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV 380

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               ++  FF +++  G  P+ V  ++ + A      L +G ++H+Y +K GF  D+ + 
Sbjct: 381 SNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVC 440

Query: 300 NTLMDMYAKCCCVNYMGRVFYQM-TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           N+L+ MY+KC  +N   +VF  +    D +SW T++    Q N   + L L + +    +
Sbjct: 441 NSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRI 500

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D + + +VL++   +       +IH +I++ GL+ D+ + NA++++Y KCG+++ +R 
Sbjct: 501 KPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARK 560

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F+SI + D++SW+S+I  Y   G   EA ELF  M    V+ + IT V  L+A S + +
Sbjct: 561 MFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGM 620

Query: 478 LKKGKELNGFIIRKGFNLEGSV--ASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSM 534
           +++G +L    +++ + +  +    S +VD+ AR G LD+A      +    D+++W ++
Sbjct: 621 VEEGLKLYR-TMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTL 679

Query: 535 INANGLHGR---GKVAIDLFYKMEAESFA 560
           + A  +HG    GK A +   K++  + A
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKIDPSNSA 708



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 229/474 (48%), Gaps = 17/474 (3%)

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           +    + +L+ +A++ F   Q     P   V   + ++A   L +L +G+++H + +   
Sbjct: 69  IISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCN 128

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           +  D+ + N ++ MY KC  +     +F  M  ++ +SWT++I+GY++      A+ L+ 
Sbjct: 129 YQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYV 188

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
            +   G   D    GS++ +CSGL      +++H ++++    +DL+  NA++ +Y K  
Sbjct: 189 QMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFS 248

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSAL 469
            +  + NVF  I  KD++SW SMI+ +   G   EAL  F  +++++  + +     SA 
Sbjct: 249 QMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAF 308

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           SA S L     G++++G  I+ G   +     SL DMYA+CG L+ A  VF  ++  DL+
Sbjct: 309 SACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLV 368

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-I 588
            W ++I         K +   F +M      P+ +T L+LL ACS   ++N G +    I
Sbjct: 369 AWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYI 428

Query: 589 MRCDYQLD-PWPEHYAC--LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
           ++  + LD P      C  L+ +  + ++L +A Q    +  +     W  LL AC    
Sbjct: 429 VKMGFNLDIP-----VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACL--Q 481

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE---QVRMRMRGSGL 696
             + GE++    L        ++V ++NV  +S +    E   Q+   +  SGL
Sbjct: 482 QNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGL 535


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/637 (36%), Positives = 373/637 (58%), Gaps = 3/637 (0%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           +   Y + G +  A+     +  ++  SWN++L    +N  +   +Q F+ +   G+  D
Sbjct: 53  IFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVD 112

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
               V AV A   L      K  H+ AIK     D  +   LM++Y +   +    +VF 
Sbjct: 113 SFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFE 172

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
           ++  ++ + W  +I G+   +      ELF  ++  G + D  ++  ++ AC  +    +
Sbjct: 173 EVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKE 232

Query: 381 TKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
            K  HG  I+K    S+  +  ++VD+Y KCG +D++  +FE I  +DVV W+++I+ + 
Sbjct: 233 GKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFA 292

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NG A E++ +F  M   +V  +S+T  S + A SSL  LK+G+ ++G++IR G  L+  
Sbjct: 293 RNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVK 352

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
             +S +DMYA+CG +  A +VF  +  K++  W++MIN  G+HG    A++LFY+M + +
Sbjct: 353 NYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVN 412

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
             P+ +TF+++L ACSHSG I EG    + M  DY + P  EHYAC+VDLLGRA  ++EA
Sbjct: 413 QLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEA 472

Query: 619 YQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
             F+ +M  EP A  W ALLGACR+H   EL E VAKKLL L+    G YV++SN++A  
Sbjct: 473 LSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADV 532

Query: 679 RKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKL 738
             W+ V++ R++M   G+ K  G + IEI  K++ F + D+   ++ +I      + E++
Sbjct: 533 GMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERM 592

Query: 739 EREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDC 798
            RE GYV   +FVLH+V++E K ++L GHSE+LAI +G+L S EG  IRITKN+RVC DC
Sbjct: 593 -RELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDC 651

Query: 799 HSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           H+  K +S +  R++++RD  RFHH + GVCSCGDYW
Sbjct: 652 HTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 206/450 (45%), Gaps = 27/450 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + GS+  A + F+ ++   + +WN +L ++  N     VL+ + RM   G  VD+F  
Sbjct: 57  YIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL 116

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              +KAC  L         H L +K   +   ++  +L+ +Y +     +A ++F+ +  
Sbjct: 117 VFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPL 176

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K  V+ W  +I  +    +      LF  M+R G   + +     +QAC +      G  
Sbjct: 177 KNSVI-WGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKT 235

Query: 182 IHAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            H   +K    +   ++  +L+ MY +CG +  A  +  ++  +D V W++++ GF +N 
Sbjct: 236 FHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNG 295

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +++  FR++      P+ V   + V A   LG+L  G+ +H Y I+ G   D++   
Sbjct: 296 RALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYT 355

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           + +DMYAKC C+    RVF Q+  ++  SW+T+I G+  +    +AL LF  ++      
Sbjct: 356 SFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLP 415

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-------------AIVDVYG 407
           + +   SVL ACS           H   I +G S    ++              +VD+ G
Sbjct: 416 NSVTFVSVLSACS-----------HSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLG 464

Query: 408 KCGNIDYSRNVFESIESKDVVS-WTSMISS 436
           + G ID + +   ++ ++   S W +++ +
Sbjct: 465 RAGKIDEALSFINNMPTEPGASAWGALLGA 494



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 177/356 (49%), Gaps = 10/356 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + GS+ +A ++F++V  +    W  M+  +++  E   V E +SRMR  G  +D F 
Sbjct: 157 VYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFV 216

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGY-DSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              +I+AC  +     G   HGL +K  + DS  F+  SLV MY KC     A +LF+ +
Sbjct: 217 VEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEI 276

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + DVV+W++II+ ++ +G+ LE++ +FR+M    +  N+ TF + + AC        G
Sbjct: 277 SYR-DVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQG 335

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   +++G  L V    + I MYA+CG +  A  V  Q+  K+  SW++M+ GF  +
Sbjct: 336 RSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMH 395

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L  +A+  F E++   Q P+ V  V+ +SA    G +  G     ++  +    D  I 
Sbjct: 396 GLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEG-----WSHFKSMSRDYGI- 449

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             + + YA  C V+ +GR      A  FI+      G +     L A  + R  +L
Sbjct: 450 TPVEEHYA--CMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAEL 503



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 173/348 (49%), Gaps = 5/348 (1%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            L +  +L+A  +       L  G  +   Y +   ++   + F  +T ++  SW TI+A
Sbjct: 27  TLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILA 86

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
            +++N C    L+LF+ +  EG   D   +   + AC GL      K  H   I+  L  
Sbjct: 87  SHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEG 146

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           D  +  A+++VY + G+++ +  VFE +  K+ V W  MI  +++        ELF  M 
Sbjct: 147 DPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMR 206

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF-NLEGSVASSLVDMYARCGAL 513
            +  E D   +   + A  ++   K+GK  +G  I+K F +    + +SLVDMY +CG L
Sbjct: 207 RSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFL 266

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
           D A K+F  +  +D+++W+++I     +GR   +I +F +M A+S  P+ +TF +++ AC
Sbjct: 267 DFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLAC 326

Query: 574 SHSGLINEGKKFLEIM-RCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
           S  G + +G+     M R   +LD   ++Y   +D+  +   +  AY+
Sbjct: 327 SSLGSLKQGRSVHGYMIRNGVELD--VKNYTSFIDMYAKCGCIVTAYR 372


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/692 (36%), Positives = 387/692 (55%), Gaps = 38/692 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IHA  +++ +    Y A+ L+  YA   C  +  A  V  Q+   +   WN+++ G+  
Sbjct: 90  QIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYAS 149

Query: 239 N-DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           + D     + F   L    + P++        A+ RL  L  G  LH   IK    SDL 
Sbjct: 150 SSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLF 209

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           I N+L++ Y      +   RVF  M  +D +SW  +I  +A      KAL LF+ ++++ 
Sbjct: 210 ILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKD 269

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSR 416
           +  +V+ + SVL AC+    +   + I  YI   G ++ +ILN A++D+Y KCG I+ ++
Sbjct: 270 VKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAK 329

Query: 417 NVFESIESKDVVSWTSM-------------------------------ISSYVHNGLANE 445
           ++F  +  KD+VSWT+M                               IS+Y  NG    
Sbjct: 330 DLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRV 389

Query: 446 ALELFYLMN-EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           AL LF+ M    + + D +TL+ AL A++ L  +  G  ++ +I +   NL   +A+SL+
Sbjct: 390 ALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLL 449

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMYA+CG L+ A +VF+ V+ KD+ +W++MI A  ++G+GK A+DLF  M      P+ +
Sbjct: 450 DMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAV 509

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF  +L AC+H+GL+NEG++  E M   Y + P  +HY C+VD+ GRA  LE+A  F+  
Sbjct: 510 TFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEK 569

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M I PTA VW ALLGAC  H N EL E+  + LLEL+P N G +VL+SN++A +  W+ V
Sbjct: 570 MPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKV 629

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
             +R  MR S +KK P  S I++   +H F+  D SH  S +IY KL EI+EK  +  GY
Sbjct: 630 SNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKF-KPIGY 688

Query: 745 VAQTQFVLHNVEEEEKV-QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
                 +L   EE+  + Q L  HSE+LAIA+G++ +     IRI KN+R+C DCH+F K
Sbjct: 689 KPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAK 748

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           LVS+L+ R++++RD  RFHHF  G CSC DYW
Sbjct: 749 LVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 223/478 (46%), Gaps = 47/478 (9%)

Query: 5   CGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFTFPC 63
           C  ++ A+ +F+++ Q  ++ WN ++  Y S+ +P +    +  M        + FTFP 
Sbjct: 119 CSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPF 178

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           + KA + LK L  G+ +HG+V+K    S  FI+NSL+  Y        A ++F  M  K 
Sbjct: 179 LFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGK- 237

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           DVV WN++I+A++  G   +AL LF+EM+   +  N  T V+ L AC        G  I 
Sbjct: 238 DVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWIC 297

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG-------- 235
           +    +G    + + NA++ MY +CG + +A  +  ++  KD VSW +ML G        
Sbjct: 298 SYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYD 357

Query: 236 -----------------------FVQNDLYCKAMQFFRELQ-GAGQKPDQVCTVNAVSAS 271
                                  + QN     A+  F E+Q     KPD+V  + A+ AS
Sbjct: 358 EAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCAS 417

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
            +LG +  G  +H Y  K     +  +  +L+DMYAKC  +N    VF+ +  +D   W+
Sbjct: 418 AQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWS 477

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEI 384
            +I   A       AL+LF ++    +  + +   ++L AC+       G +   Q + +
Sbjct: 478 AMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPL 537

Query: 385 HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISSYVHNG 441
           +G + +  +   V    +VD++G+ G ++ + +  E +      + W +++ +   +G
Sbjct: 538 YGIVPQ--IQHYV---CVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHG 590



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 226/462 (48%), Gaps = 48/462 (10%)

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA--KCCCVN 313
           G+K ++V + N +    +  N +  K++HA+ ++     D    + L+  YA   C C+ 
Sbjct: 64  GEKGNEVESTNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLI 123

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD-ADVMIIGSVLMAC 372
           Y   VF Q+   +   W T+I GYA ++   ++  +F  +     +  +      +  A 
Sbjct: 124 YAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAA 183

Query: 373 SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           S LK +     +HG +I+  L SDL ILN++++ YG  G  D +  VF ++  KDVVSW 
Sbjct: 184 SRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWN 243

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           +MI+++   GL ++AL LF  M   +V+ + IT+VS LSA +    L+ G+ +  +I   
Sbjct: 244 AMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENN 303

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA-------------- 537
           GF     + ++++DMY +CG ++ A  +FN +  KD++ WT+M++               
Sbjct: 304 GFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIF 363

Query: 538 -----------NGL------HGRGKVAIDLFYKME-AESFAPDHITFLALLYACSHSGLI 579
                      N L      +G+ +VA+ LF++M+ ++   PD +T +  L A +  G I
Sbjct: 364 DAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAI 423

Query: 580 NEGKKF-LEIMRCDYQLDPWPEHYAC-LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           + G    + I + D  L+    H A  L+D+  +  +L +A +   +++      VW A+
Sbjct: 424 DFGHWIHVYIKKHDINLNC---HLATSLLDMYAKCGNLNKAMEVFHAVE-RKDVYVWSAM 479

Query: 638 LGACRVHSNKELGEIVAKKLLE--LDPGNPGNYVLISNVFAA 677
           +GA  ++   +    +   +LE  + P    N V  +N+  A
Sbjct: 480 IGALAMYGQGKAALDLFSSMLEAYIKP----NAVTFTNILCA 517



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 31/313 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YG  G+   A ++F  +  + V +WNAM+ A+   G P + L  +  M +  +  +  T 
Sbjct: 218 YGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITM 277

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA   DL+ G  I   +   G+     + N+++ MY KC     A+ LF++M E
Sbjct: 278 VSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSE 337

Query: 122 KEDV------------------------------VLWNSIISAYSASGQCLEALGLFREM 151
           K+ V                                WN++ISAY  +G+   AL LF EM
Sbjct: 338 KDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEM 397

Query: 152 Q-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           Q       +  T + AL A         G  IH    K   NL  ++A +L+ MYA+CG 
Sbjct: 398 QLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGN 457

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           + +A  V + +E KD   W++M+           A+  F  +  A  KP+ V   N + A
Sbjct: 458 LNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCA 517

Query: 271 SGRLGNLLNGKEL 283
               G +  G++L
Sbjct: 518 CNHAGLVNEGEQL 530



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 122/280 (43%), Gaps = 61/280 (21%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTW-------------------------------NAM 29
           MY KCG + DA+ LF+K+S++ + +W                               NA+
Sbjct: 318 MYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNAL 377

Query: 30  LGAYVSNGEPLRVLETYSRMRV-LGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
           + AY  NG+P   L  +  M++      D  T  C + A A L  +D G  IH  + K  
Sbjct: 378 ISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHD 437

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
            +    +  SL+ MYAKC +  KA ++F  + E++DV +W+++I A +  GQ   AL LF
Sbjct: 438 INLNCHLATSLLDMYAKCGNLNKAMEVFHAV-ERKDVYVWSAMIGALAMYGQGKAALDLF 496

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL--------------Q 194
             M    +  NA TF   L AC            HA  V  G+ L              Q
Sbjct: 497 SSMLEAYIKPNAVTFTNILCACN-----------HAGLVNEGEQLFEQMEPLYGIVPQIQ 545

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
            YV   ++ ++ R G + +AA  + ++    + + W ++L
Sbjct: 546 HYV--CVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALL 583



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/268 (21%), Positives = 111/268 (41%), Gaps = 35/268 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A ++F  V ++ V+ W+AM+GA    G+    L+ +S M    I  +A T
Sbjct: 451 MYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVT 510

Query: 61  FPCVIKACAMLKDLDCGAK-------IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           F  ++ AC     ++ G +       ++G+V +  +         +V ++ +     KA 
Sbjct: 511 FTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQH------YVCVVDIFGRAGLLEKAA 564

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
              ++M       +W +++ A S  G              V L   AY  +  L+ C   
Sbjct: 565 SFIEKMPIPPTAAVWGALLGACSRHGN-------------VELAELAYQNLLELEPCNHG 611

Query: 174 SFETLG-MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
           +F  L  +   A   +   NL+  + ++ +     C  + +  G++++    D+      
Sbjct: 612 AFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSI-DVNGIVHEFLVGDNSH---- 666

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPD 260
              F Q  +Y K  +   + +  G KPD
Sbjct: 667 --PFSQK-IYSKLDEISEKFKPIGYKPD 691


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/660 (36%), Positives = 370/660 (56%), Gaps = 39/660 (5%)

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V   ++  + + WN+ML G   +     A++ +  +   G  P+       + +  +
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK--------------------CCCVN 313
                 G+++HA  +K G   D  +  +L+ MYA+                     C   
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 314 YMG-----------RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
             G           +VF ++T +D +SW  +I GY +N  + +ALELF+ +    +  D 
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-----SDLVILNAIVDVYGKCGNIDYSRN 417
             + SV+ AC+    +   +++H ++          S L I+NA++D+Y KCG+++ +  
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +FE +  KDVVSW ++I  Y H  L  EAL LF  M  +    + +TL+S L A + L  
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGA 316

Query: 478 LKKGKELNGFIIRK--GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           +  G+ ++ +I +K  G   E S+ +SL+DMYA+CG ++ A++VFN +  + L  W +MI
Sbjct: 317 IDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMI 376

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
               +HGR   A DLF +M      PD ITF+ LL ACSHSGL++ G++  + M  DY L
Sbjct: 377 FGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNL 436

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
            P  EHY C++DLLG +   +EA + + +M +EP   +WC+LL AC+ H N EL E  A+
Sbjct: 437 TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQ 496

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           KL++++P N G+YVL+SN++A + +W+DV +VR  + G G+KK PG S IE+ + +H FI
Sbjct: 497 KLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFI 556

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
             DK H    EIY  L E+  +LE E G+   T  VL  +EEE K   L  HSE+LAIA+
Sbjct: 557 IGDKLHPRRREIYHMLEEMDVQLE-EAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAF 615

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G++ +  G+ + I KNLRVC +CH   KL+S+++ RE+V RD  RFHHF  GVCSC DYW
Sbjct: 616 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 164/610 (26%), Positives = 276/610 (45%), Gaps = 97/610 (15%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F+ + +  +  WN ML  + S+ +P+  LE Y RM  LG   ++++FP ++K+CA 
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK---------------------CY-- 107
            K  + G +IH  VLK G     ++  SL++MYA+                     C   
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 108 --------DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN 159
                   DFR AR++FD + E+ DVV WN++I+ Y  +G+  EAL LF+EM R  +  +
Sbjct: 137 ITGYASRGDFRSARKVFDEITER-DVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPD 195

Query: 160 AYTFVAALQACEDSSFETLGMEIHA----ATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
             T V+ + AC  S    LG ++H+         G +  + + NALI +Y++CG +  A 
Sbjct: 196 EGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAF 255

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
           G+   L  KD VSWN+++ G+   +LY +A+  F+E+  +G+ P+ V  ++ + A   LG
Sbjct: 256 GLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315

Query: 276 NLLNGKELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
            +  G+ +H Y  K  +G  ++  +  +L+DMYAKC  +    +VF  M  +   SW  +
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAM 375

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           I G+A +     A +LF  ++   ++ D +    +L ACS                    
Sbjct: 376 IFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACS-------------------- 415

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIE-----SKDVVSWTSMISSYVHNGLANEALE 448
                           G +D  R +F+S+      +  +  +  MI    H+GL  EA E
Sbjct: 416 --------------HSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEE 461

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           + + M    +E D +   S L A      L+  +     +I+      GS    L ++YA
Sbjct: 462 MIHTM---PMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYV-LLSNIYA 517

Query: 509 RCGAL-DIA-----------NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             G   D+A            KV  C   +   +    I  + LH R +    +  +M+ 
Sbjct: 518 TAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDV 577

Query: 557 E----SFAPD 562
           +     FAPD
Sbjct: 578 QLEEAGFAPD 587



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 208/473 (43%), Gaps = 49/473 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G    A ++FD++++R V +WNAM+  YV NG     LE +  M    +  D  T 
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKC----GYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             V+ ACA    ++ G ++H  V       G+ S+  IVN+L+ +Y+KC D   A  LF+
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFE 259

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            +  K DVV WN++I  Y+ +    EAL LF+EM R G   N  T ++ L AC       
Sbjct: 260 GLSCK-DVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAID 318

Query: 178 LGMEIHAATVK--SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           +G  IH    K   G   +  +  +LI MYA+CG +  A  V   +  +   SWN+M+ G
Sbjct: 319 IGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFG 378

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           F  +     A   F  ++G   +PD +  V  +SA    G L  G+++        F S 
Sbjct: 379 FAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI--------FKSM 430

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            Q  N    +    C ++ +G                       +    +A E+  T+ +
Sbjct: 431 TQDYNLTPKLEHYGCMIDLLG----------------------HSGLFKEAEEMIHTMPM 468

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR---KGLSDLVILNAIVDVYGKCGNI 412
           E    D +I  S+L AC     +   +     +I+   +     V+L+ I    G+  ++
Sbjct: 469 E---PDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDV 525

Query: 413 DYSRNVFESIESKDVVSWTSM-ISSYVHNGLANEAL-----ELFYLMNEANVE 459
              R V      K V   +S+ + S VH  +  + L     E+++++ E +V+
Sbjct: 526 ARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQ 578



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 177/377 (46%), Gaps = 52/377 (13%)

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLM 370
           + Y   VF  +   + + W T++ G+A ++  + ALE++ R V L  L  +      +L 
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHL-PNSYSFPFLLK 72

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS--------------------------------DLVI 398
           +C+  K   + ++IH  +++ G                                  D+V 
Sbjct: 73  SCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVS 132

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
             A++  Y   G+   +R VF+ I  +DVVSW +MI+ YV NG   EALELF  M   NV
Sbjct: 133 CTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNV 192

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFI----IRKGFNLEGSVASSLVDMYARCGALD 514
             D  TLVS +SA +    ++ G++++ ++       GF+    + ++L+D+Y++CG ++
Sbjct: 193 RPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVE 252

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A  +F  +  KD++ W ++I         K A+ LF +M      P+ +T L++L AC+
Sbjct: 253 TAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACA 312

Query: 575 HSGLINEGK-------KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
           H G I+ G+       K L+ +  +  L         L+D+  +   +E A+Q   SM +
Sbjct: 313 HLGAIDIGRWIHVYIDKKLKGVTNETSLR------TSLIDMYAKCGDIEAAHQVFNSM-L 365

Query: 628 EPTAEVWCALLGACRVH 644
             +   W A++    +H
Sbjct: 366 YRSLSSWNAMIFGFAMH 382



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  LF+ +S + V +WN ++G Y         L  +  M   G   +  T
Sbjct: 244 LYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVT 303

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              V+ ACA L  +D G  IH  + K   G  +   +  SL+ MYAKC D   A Q+F+ 
Sbjct: 304 LLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNS 363

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  +  +  WN++I  ++  G+   A  LF  M+   +  +  TFV  L AC  S    L
Sbjct: 364 MLYR-SLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDL 422

Query: 179 GMEIHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           G +I  +  +       L+ Y    +I +    G   EA  +++ +    D V W S+L
Sbjct: 423 GRQIFKSMTQDYNLTPKLEHY--GCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLL 479



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A Q+F+ +  R++ +WNAM+  +  +G      + +SRMR   +  D  T
Sbjct: 347 MYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDIT 406

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FRKAR 113
           F  ++ AC+    LD G +I   +      + D+ +   +  Y    D       F++A 
Sbjct: 407 FVGLLSACSHSGLLDLGRQIFKSM------TQDYNLTPKLEHYGCMIDLLGHSGLFKEAE 460

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQ 140
           ++   M  + D V+W S++ A    G 
Sbjct: 461 EMIHTMPMEPDGVIWCSLLKACKKHGN 487


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/635 (37%), Positives = 373/635 (58%), Gaps = 34/635 (5%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           L+ +YA CG+   A  +  ++ +K+ V +N M+  +V N LY  A+  ++ +   G  PD
Sbjct: 60  LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPD 119

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
                  + AS R  +L  G ++H   +K G   +L +GN L+ MY KC  +    +V  
Sbjct: 120 MYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLD 179

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
           ++  +D +SW ++++ YAQN     ALEL R ++   L  +   + S+L A         
Sbjct: 180 EIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPA--------- 230

Query: 381 TKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
                            + N   D      N+ Y + +F  +  K V+SW  MI+ YV+N
Sbjct: 231 -----------------VTNTTSD------NVLYVKEMFLKLTKKSVISWNVMIAMYVNN 267

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
            +  EA+ L+  M    VE D +++VS L A   LS L  G+ ++ F  RK       + 
Sbjct: 268 SMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLE 327

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           ++L+DMYA+CG L  A  VFN +Q +D++ WTS+I+A G  G+G+ A+ +F +M      
Sbjct: 328 NALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLN 387

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
           PD I F+++L ACSH+GL+++G+ +  +M  +  + P  EH+AC+VDLLGRA  ++EAY 
Sbjct: 388 PDSIAFVSVLAACSHAGLLDDGRYYFNLM-AECGITPKLEHFACVVDLLGRAGKIDEAYG 446

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
           F+R M +EP   VW  LL ACRV+SN  +G + A KLL L+P + G YVL+SN++A + +
Sbjct: 447 FIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGR 506

Query: 681 WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
           W DV  +R  M   G+KK PG S +E+ + +H+F+A D SH +S +IY++L  +  K+ +
Sbjct: 507 WADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKM-K 565

Query: 741 EGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHS 800
           E GY+ +T   LH+VEEE+K   L  HSE+LA+A+ ++ +  G+ IR+TKNLRVC DCH 
Sbjct: 566 ELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHV 625

Query: 801 FCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             KL+S++  RE+++RD +RFHHF+ G CSCGDYW
Sbjct: 626 AAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 254/502 (50%), Gaps = 39/502 (7%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVN-SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
            D++   K+HG VL   Y   +  V   L+ +YA C +   AR +FD + +K +VV +N 
Sbjct: 32  PDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDK-NVVFFNV 90

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I +Y  +    +AL +++ M   G V + YT+   L+A   S    +G++IH A +K G
Sbjct: 91  MIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIG 150

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +L +YV N LIAMY +C  + EA  VL ++  +D VSWNSM++ + QN  +  A++  R
Sbjct: 151 LDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCR 210

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           E++    KP+  CT+ ++  +                          + NT  D      
Sbjct: 211 EMEALNLKPND-CTMASLLPA--------------------------VTNTTSDN----- 238

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            V Y+  +F ++T +  ISW  +IA Y  N+   +A+ L+  ++  G++ DV+ I SVL 
Sbjct: 239 -VLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLP 297

Query: 371 ACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           A   L  +S  + +H +  RK  L +L++ NA++D+Y KCG +  +R VF  ++ +DVVS
Sbjct: 298 AYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVS 357

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           WTS+IS+Y   G   +A+ +F  M  + +  DSI  VS L+A S   +L  G+     + 
Sbjct: 358 WTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMA 417

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAI 548
             G   +    + +VD+  R G +D A      +  + D  +W  +++A  ++    + I
Sbjct: 418 ECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGI 477

Query: 549 DLFYKMEAESFAPDHITFLALL 570
               K+      P+H  +  LL
Sbjct: 478 LAADKLLM--LNPEHSGYYVLL 497



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 217/438 (49%), Gaps = 36/438 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CG    A  +FD+++ + V  +N M+ +YV+N      L  Y  M   G   D +T
Sbjct: 63  VYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYT 122

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +PCV+KA +    L  G +IHG VLK G D   ++ N L+AMY KC   ++A+Q+ D + 
Sbjct: 123 YPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIP 182

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV WNS++S Y+ +G+  +AL L REM+ + L  N  T  + L A  +++ + +  
Sbjct: 183 CR-DVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNV-- 239

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                         +YV    +                 +L  K  +SWN M+  +V N 
Sbjct: 240 --------------LYVKEMFL-----------------KLTKKSVISWNVMIAMYVNNS 268

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +  +A+  + +++  G +PD V  V+ + A G L  L  G+ +H +A ++  + +L + N
Sbjct: 269 MPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLEN 328

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC C+     VF QM  +D +SWT+II+ Y +      A+ +F  ++  GL+ 
Sbjct: 329 ALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNP 388

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVF 419
           D +   SVL ACS    +   +     +   G++  L     +VD+ G+ G ID +    
Sbjct: 389 DSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFI 448

Query: 420 ESIE-SKDVVSWTSMISS 436
             +    D   W  ++S+
Sbjct: 449 RQMPLEPDERVWGPLLSA 466



 Score = 42.7 bits (99), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 6/110 (5%)

Query: 469 LSAASSLSILKK--GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           L     ++ LKK  GK LN   +R       SV   L+ +YA CG   +A  +F+ +  K
Sbjct: 28  LDQYPDINTLKKLHGKVLNDQYLR----WNPSVGIKLMRVYAACGEPGLARHIFDEITDK 83

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
           +++ +  MI +   +   K A+ ++  M  + F PD  T+  +L A S S
Sbjct: 84  NVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRS 133


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/608 (37%), Positives = 374/608 (61%), Gaps = 7/608 (1%)

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           WN +L+   +      A++ FR L  +  +P+       ++A  RLG+L   + +   A 
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALPSSA-RPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
             G+  D+ + + L+ +Y++C  +    RVF  M  +D ++W+T++AG+      ++AL 
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYG 407
           ++  ++  G+  D +++  V+ AC           +HG ++R  +  D+V   ++V +Y 
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           K G++D +  VF  +  ++ V+W+++IS +  NG A EAL+LF  +    ++  S  LVS
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
           AL A +S+  LK GK ++GFI+R+    +  + ++++DMY++CG+L+ A K+FN + ++D
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRD 373

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           L+LW ++I   G HG G  A+ LF ++      PDH TF +LL A SHSGL+ EGK + +
Sbjct: 374 LVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 433

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
            M  ++ ++P  +HY C+VDLL R+  +EEA   + SMQ EPT  +W  LL  C  +   
Sbjct: 434 RMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKL 493

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           ELGE +AKK+LEL P + G   L+SN++AA++KW  V ++R  M+ SG KK PG S IE+
Sbjct: 494 ELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEV 553

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGH 767
               H+F+  D+SH +  EI K +A++  ++ R+ GYV +T+FV H+++E+   Q+L  H
Sbjct: 554 KGTRHAFVMEDQSHPQHREILKMVAKLNSEM-RKLGYVPRTEFVYHDLDED---QLLSYH 609

Query: 768 SERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
           SERLAIA+G+L ++ G+ + I KNLRVC DCH   K +S++  RE+VVRDA RFHHF+ G
Sbjct: 610 SERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDG 669

Query: 828 VCSCGDYW 835
            CSCGDYW
Sbjct: 670 ACSCGDYW 677



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 236/453 (52%), Gaps = 10/453 (2%)

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           WN ++SA+S +G    AL +FR +       N+ TF   L AC           +     
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALPSSAR-PNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
            +G    V+V +AL+ +Y+RCG M EA  V   +  KD V+W++M+ GFV      +A+ 
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
            +  ++  G   D+V  V  + A    GN   G  +H   ++     D+    +L+ MYA
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 308 KCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
           K   ++   +VF  M  ++ ++W+ +I+G+AQN   ++AL+LFR +Q +GL      + S
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
            L+AC+ +  +   K IHG+I+R+     ++  A++D+Y KCG+++ +R +F  + S+D+
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRRLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDL 374

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           V W ++I+    +G  ++AL LF  +NE  ++ D  T  S LSA S   ++++GK     
Sbjct: 375 VLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDR 434

Query: 488 IIRKGFNLEGSVAS--SLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGRG 544
           +I++ F +E +      +VD+ AR G ++ AN +   +QT+  I +W  ++  +G     
Sbjct: 435 MIKE-FGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILL--SGCLNNK 491

Query: 545 KVAIDLFYKMEAESFAPDHITFLAL---LYACS 574
           K+ +      +     P+ I  LAL   LYA +
Sbjct: 492 KLELGETIAKKILELRPEDIGVLALVSNLYAAA 524



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 213/424 (50%), Gaps = 18/424 (4%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGISV--DAFTFPCVIKACAMLKDLDCGAKIHGL 83
           WN +L A+   G P   L  +   R L  S   ++ TF   + ACA L DLD    +   
Sbjct: 76  WNGLLSAHSRAGAPGAALRVF---RALPSSARPNSTTFTLTLTACARLGDLDAAESVRVR 132

Query: 84  VLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE 143
               GY    F+ ++L+ +Y++C    +A ++FD M  K D V W+++++ +  +G+ +E
Sbjct: 133 AFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRK-DRVAWSTMVAGFVTAGRPVE 191

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
           AL ++  M+  G+  +    V  +QAC  +    +G  +H   ++    + V    +L++
Sbjct: 192 ALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVS 251

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           MYA+ G +  A  V   +  ++ V+W+++++GF QN    +A+  FRELQ  G +P    
Sbjct: 252 MYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWA 311

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
            V+A+ A   +G L  GK +H + +++       +G  ++DMY+KC  +    ++F +++
Sbjct: 312 LVSALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLS 370

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
           ++D + W  IIA    + C   AL LF+ +   G+  D     S+L A S    + + K 
Sbjct: 371 SRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGK- 429

Query: 384 IHGYIIRKGLSDLVILNA------IVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
              +   + + +  I  A      IVD+  + G ++ + ++  S++++  ++ W  ++S 
Sbjct: 430 ---FWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSG 486

Query: 437 YVHN 440
            ++N
Sbjct: 487 CLNN 490



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 191/389 (49%), Gaps = 11/389 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y +CG++ +A ++FD + ++    W+ M+  +V+ G P+  L  YSRMR  G+S D   
Sbjct: 151 LYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVV 210

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI+AC    +   GA +HG +L+           SLV+MYAK      A Q+F  M 
Sbjct: 211 MVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMP 270

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DV  W+++IS ++ +G+ +EAL LFRE+Q  GL   ++  V+AL AC    F  LG 
Sbjct: 271 YRNDVT-WSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGK 329

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   ++  +  Q  +  A++ MY++CG +  A  +  +L ++D V WN+++     + 
Sbjct: 330 SIHGFILRRLE-WQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHG 388

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIG 299
               A+  F+EL   G KPD     + +SA    G +  GK      IK+ G     +  
Sbjct: 389 CGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHY 448

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAGYAQNNCHLKALELFRTVQ---L 355
             ++D+ A+   V     +   M  +  I+ W  +++G   N    K LEL  T+    L
Sbjct: 449 VCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNN----KKLELGETIAKKIL 504

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           E    D+ ++  V    +  K   + +EI
Sbjct: 505 ELRPEDIGVLALVSNLYAAAKKWDKVREI 533


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/587 (39%), Positives = 356/587 (60%), Gaps = 4/587 (0%)

Query: 251 ELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           +L  AG+  P      + ++A  +  NL + +++HA+     F  D  + N+L+ MY KC
Sbjct: 40  DLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKC 99

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             V     VF QM  +D +SWT++IAGYAQN+  ++A+ L   +       +     S+L
Sbjct: 100 RSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLL 159

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            A          ++IH   ++ G   D+ + +A++D+Y +CG +D +  VF+ ++SK+ V
Sbjct: 160 KAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGV 219

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           SW ++IS +   G    AL  F  M     E+   T  S  S+ + L  L++GK ++  +
Sbjct: 220 SWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHV 279

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           I+    L   V ++L+DMYA+ G++  A KVF+ V  KDL+ W SM+ A   +G GK A+
Sbjct: 280 IKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAV 339

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
             F +M       + ITFL +L ACSH GL+ EGK++ E+M+ +Y L+P  +HY  +V L
Sbjct: 340 SHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMK-EYDLEPEIDHYVTVVAL 398

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
           LGRA  L  A  F+  M +EPTA VW ALL ACR+H N ++G+  A  + ELDP + G  
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPP 458

Query: 669 VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
           VL+ N++A++ +W    +VRM M+ +G+KK P  SW+E+ N +H F+A D +H +++EIY
Sbjct: 459 VLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIY 518

Query: 729 KKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRI 788
           K   EI++K+ +E GYV    +VL +V+++EK   L  HSE+LA+A+ +++   G+ IRI
Sbjct: 519 KMWGEISKKIRKE-GYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRI 577

Query: 789 TKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            KN+R+C DCHS  K +S++FGRE+VVRD NRFHHF +G CSCGDYW
Sbjct: 578 MKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 175/328 (53%), Gaps = 12/328 (3%)

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           I ACA  K+L+   KIH  +    +    F+ NSL+ MY KC     AR +FD+M  ++D
Sbjct: 58  ITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQM-RRKD 116

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           +V W S+I+ Y+ +   +EA+GL   M +     N +TF + L+A    +    G +IHA
Sbjct: 117 MVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHA 176

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             VK G +  VYV +AL+ MYARCGKM  A  V  +L++K+ VSWN++++GF +      
Sbjct: 177 LAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGES 236

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  F E+   G +       +  S+  RLG L  GK +HA+ IK        +GNTL+D
Sbjct: 237 ALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLD 296

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           MYAK   +    +VF ++  +D ++W +++  +AQ     +A+  F  ++  G+  + + 
Sbjct: 297 MYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQIT 356

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKG 392
              +L ACS           HG ++++G
Sbjct: 357 FLCILTACS-----------HGGLVKEG 373



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 167/337 (49%), Gaps = 2/337 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC SVLDA  +FD++ ++ + +W +++  Y  N  P+  +     M       + FT
Sbjct: 95  MYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFT 154

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++KA     D   G +IH L +KCG+    ++ ++L+ MYA+C     A  +FD++ 
Sbjct: 155 FASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLD 214

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  V  WN++IS ++  G    AL  F EM R G     +T+ +   +         G 
Sbjct: 215 SKNGVS-WNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGK 273

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KS Q L  +V N L+ MYA+ G M +A  V  +++NKD V+WNSMLT F Q  
Sbjct: 274 WVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYG 333

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A+  F E++ +G   +Q+  +  ++A    G +  GK       +     ++    
Sbjct: 334 LGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYV 393

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAG 336
           T++ +  +   +NY     ++M  +   + W  ++A 
Sbjct: 394 TVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/782 (31%), Positives = 409/782 (52%), Gaps = 33/782 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYS------------- 47
           MY +CG    A  +FD +  R   +WN ML AYV  G+       +              
Sbjct: 63  MYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTL 122

Query: 48  ------------------RMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                              M   G+++D  T   ++K+C  L DL  G +IH L +K G 
Sbjct: 123 ISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGL 182

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           ++     ++LV MY KC     A + F  MGE+  V  W + I+    + Q    + LF 
Sbjct: 183 ETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVS-WGAAIAGCVQNEQYTRGMELFV 241

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +MQR+GL  +   + +A ++C      +   ++HA  +K+  +    V  A++ +YA+ G
Sbjct: 242 QMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAG 301

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + +A      L + +  + N+M+ G V+  L  +AMQ F+ +  +G   D +      S
Sbjct: 302 NLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFS 361

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A   +     G ++H  A+K GF  D+ + N ++D+Y KC  +     VF +M  +D +S
Sbjct: 362 ACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS 421

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W  IIA   QN C+   +     +   G++ D    GSVL AC+GL+ +     +HG  I
Sbjct: 422 WNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAI 481

Query: 390 RKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           + GL  D  + + +VD+Y KCG I  ++ + + I  +++VSW S+IS +     + EA  
Sbjct: 482 KSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQR 541

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
            F  M +  V+ D  T  + L   ++L+ ++ GK+++G II++    +  ++S+LVDMYA
Sbjct: 542 FFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYA 601

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           +CG +  +  +F   +  D + W +MI    LHG+G  A+++F +M+  +  P+H TF+A
Sbjct: 602 KCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVA 661

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L ACSH GL+++G ++  +M   Y+L P  EH+AC+VD+LGR+   +EA +F+RSM IE
Sbjct: 662 VLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIE 721

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
             A VW  LL  C++  + E+ E  A  +L LDP +   Y+L+SNV+A S KW DV + R
Sbjct: 722 ADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTR 781

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
             MR   L+K PG SWIE+ +++H F+  DK H  S E+Y+ L  +  +++  G   A  
Sbjct: 782 RLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSGYEPASA 841

Query: 749 QF 750
            F
Sbjct: 842 LF 843



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/559 (28%), Positives = 272/559 (48%), Gaps = 33/559 (5%)

Query: 60  TFPCVIKACAML--KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           TF  + + CA      L  G   H  +L  G+  T F+ N L+ MYA+C     A  +FD
Sbjct: 19  TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78

Query: 118 RMGEKE------------------------------DVVLWNSIISAYSASGQCLEALGL 147
            M  ++                              DVV WN++IS Y   G    ++GL
Sbjct: 79  TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
             EM R G+  +  T    L++C       LG++IHA  VK+G    V   +AL+ MY +
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGK 198

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
           C  + +A    + +  ++SVSW + + G VQN+ Y + M+ F ++Q  G    Q    +A
Sbjct: 199 CRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASA 258

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
             +   +  L   ++LHA+AIK  F SD  +G  ++D+YAK   +    R F  +   + 
Sbjct: 259 FRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNV 318

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
            +   ++ G  +     +A++LF+ +   G+  DV+ +  V  AC+ +K   Q  ++H  
Sbjct: 319 ETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCL 378

Query: 388 IIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            ++ G   D+ + NAI+D+YGKC  +  +  VF+ +E +D VSW ++I++   N    + 
Sbjct: 379 AVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDT 438

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           +     M  + +E D  T  S L A + L  L+ G  ++G  I+ G  L+  V+S++VDM
Sbjct: 439 IAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDM 498

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y +CGA+  A K+ + +  ++L+ W S+I+   L  + + A   F +M      PDH T+
Sbjct: 499 YCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTY 558

Query: 567 LALLYACSHSGLINEGKKF 585
             +L  C++   I  GK+ 
Sbjct: 559 ATVLDTCANLATIELGKQI 577



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 227/468 (48%), Gaps = 40/468 (8%)

Query: 155 GLVTNAYTFVAALQACEDS--SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
           G V  A TF    Q C  +  S  T G   HA  + SG     +V+N L+ MYARCG   
Sbjct: 13  GFVATA-TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTA 71

Query: 213 EAAGVLYQLENKDSVSWNSMLT-------------------------------GFVQNDL 241
            A GV   + ++D+VSWN+MLT                               G+ Q+ +
Sbjct: 72  HAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGM 131

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           +  ++    E+   G   D+      + + G L +L  G ++HA A+K G  +D++ G+ 
Sbjct: 132 FRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSA 191

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMY KC  ++   R F+ M  ++ +SW   IAG  QN  + + +ELF  +Q  GL   
Sbjct: 192 LVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVS 251

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFE 420
                S   +C+ + C+S  +++H + I+    SD V+  AIVDVY K GN+  +R  F 
Sbjct: 252 QPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFI 311

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +   +V +  +M+   V  GL  EA++LF  M  + V  D I+L    SA + +    +
Sbjct: 312 GLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQ 371

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           G +++   ++ GF+++  V ++++D+Y +C AL  A  VF  ++ +D + W ++I A   
Sbjct: 372 GLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQ 431

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACS-----HSGLINEGK 583
           +   +  I    +M      PD  T+ ++L AC+       GL+  GK
Sbjct: 432 NECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGK 479


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/737 (33%), Positives = 403/737 (54%), Gaps = 57/737 (7%)

Query: 154  VGLVTNAYTFVAA-LQACE------DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
            +G   ++Y +    LQ+C        +S   LG  +HA  VK+G    +  AN L+ +YA
Sbjct: 277  IGFSISSYFYPPLWLQSCSLYHFTLSNSPPPLG-TLHALYVKNGSLQTLNPANHLLTLYA 335

Query: 207  RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
            +   M  A  +  ++  +++ +W  +++GF +          FRE+Q  G  P+Q    +
Sbjct: 336  KSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSS 395

Query: 267  AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
             +       NL  GK +HA+ ++ G   D+ +GN+++D+Y KC    Y  R+F  M   D
Sbjct: 396  VLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGD 455

Query: 327  FISWTTIIAGYAQNNCHLKALELFRTVQLE------------------------------ 356
             +SW  +I  Y +     K+L++FR +  +                              
Sbjct: 456  VVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVE 515

Query: 357  -GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
             G +   +     L+  S L  +   +++HG +++ G  SD  I +++V++Y KCG +D 
Sbjct: 516  CGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDK 575

Query: 415  SRNVFESI---------------ESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            +  +   +               E K  +VSW SM+S YV NG   + L+ F LM    V
Sbjct: 576  ASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELV 635

Query: 459  ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
              D  T+ + +SA ++  IL+ G+ ++ ++ + G  ++  V SSL+DMY++ G+LD A  
Sbjct: 636  VVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWM 695

Query: 519  VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
            VF      ++++WTSMI+   LHG+G  AI LF +M  +   P+ +TFL +L ACSH+GL
Sbjct: 696  VFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGL 755

Query: 579  INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
            I EG ++  +M+  Y ++P  EH   +VDL GRA HL +   F+    I     VW + L
Sbjct: 756  IEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFL 815

Query: 639  GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
             +CR+H N E+G+ V++ LL++ P +PG YVL+SN+ A++ +W +  +VR  M   G+KK
Sbjct: 816  SSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKK 875

Query: 699  TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
             PG SWI++ ++IH+F+  D+SH + DEIY  L  +  +L +E GY    + V+ +VEEE
Sbjct: 876  QPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRL-KEIGYSFDVKLVMQDVEEE 934

Query: 759  EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
            +   ++  HSE+LA+ +G++ +   + IRI KNLR+C DCH+F K  S+L  RE++VRD 
Sbjct: 935  QGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDI 994

Query: 819  NRFHHFEAGVCSCGDYW 835
            +RFHHF+ G CSCGDYW
Sbjct: 995  HRFHHFKHGSCSCGDYW 1011



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 227/491 (46%), Gaps = 61/491 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K  ++  A++LFD++ QR   TW  ++  +   G    V   +  M+  G   + +T
Sbjct: 333 LYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYT 392

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+K C++  +L  G  +H  +L+ G D    + NS++ +Y KC  F  A +LF+ M 
Sbjct: 393 LSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMN 452

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT---------------------- 158
           E  DVV WN +I AY  +G   ++L +FR +    +V+                      
Sbjct: 453 EG-DVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLY 511

Query: 159 ---------NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
                    +A TF  AL      S   LG ++H   +K G +   ++ ++L+ MY +CG
Sbjct: 512 CMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCG 571

Query: 210 KMTEAAGVL----------------YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
           +M +A+ +L                Y+      VSW SM++G+V N  Y   ++ FR + 
Sbjct: 572 RMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMV 631

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
                 D       +SA    G L  G+ +HAY  K G   D  +G++L+DMY+K   ++
Sbjct: 632 RELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLD 691

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
               VF Q    + + WT++I+GYA +   + A+ LF  +  +G+  + +    VL ACS
Sbjct: 692 DAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACS 751

Query: 374 -------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN-VFESIESK 425
                  G +     K+   Y I  G+       ++VD+YG+ G++  ++N +F++  S 
Sbjct: 752 HAGLIEEGCRYFRMMKD--AYCINPGVEH---CTSMVDLYGRAGHLTKTKNFIFKNGISH 806

Query: 426 DVVSWTSMISS 436
               W S +SS
Sbjct: 807 LTSVWKSFLSS 817



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 145/596 (24%), Positives = 269/596 (45%), Gaps = 87/596 (14%)

Query: 7   SVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCV-I 65
           +V+    L  K+SQR+V T   +L                     +G S+ ++ +P + +
Sbjct: 252 AVVGGSMLASKISQRSVATVGGLL--------------------FIGFSISSYFYPPLWL 291

Query: 66  KACAML-----KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           ++C++              +H L +K G   T    N L+ +YAK  +   A++LFD + 
Sbjct: 292 QSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIP 351

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ +   W  +IS ++ +G       LFREMQ  G   N YT  + L+ C   +   LG 
Sbjct: 352 QR-NTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGK 410

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLTGFVQN 239
            +HA  +++G ++ V + N+++ +Y +C K+ E A  L++L N+ D VSWN M+  +++ 
Sbjct: 411 GVHAWMLRNGIDVDVVLGNSILDLYLKC-KVFEYAERLFELMNEGDVVSWNIMIGAYLRA 469

Query: 240 DLYCKAMQFFRELQ-------------------------------GAGQKPDQVCTVNAV 268
               K++  FR L                                  G +   V    A+
Sbjct: 470 GDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIAL 529

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM------------- 315
             +  L ++  G++LH   +K GF SD  I ++L++MY KC  ++               
Sbjct: 530 ILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLR 589

Query: 316 ---GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
               RV Y+      +SW ++++GY  N  +   L+ FR +  E +  D+  + +++ AC
Sbjct: 590 KGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISAC 649

Query: 373 SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           +    +   + +H Y+ + G   D  + ++++D+Y K G++D +  VF      ++V WT
Sbjct: 650 ANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWT 709

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL-----NG 486
           SMIS Y  +G    A+ LF  M    +  + +T +  L+A S   ++++G        + 
Sbjct: 710 SMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDA 769

Query: 487 FIIRKGFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDLILWTSMINANGLH 541
           + I  G        +S+VD+Y R G L    N +F    +    +W S +++  LH
Sbjct: 770 YCINPGVEH----CTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLH 821


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/743 (33%), Positives = 420/743 (56%), Gaps = 4/743 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFT 60
           Y K GSV DA  LFDK+  R + +W++++  Y   G   + L  +    R     ++ + 
Sbjct: 85  YFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYI 144

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I+AC      + G+++H  V+K G+    ++  SLV +YAK  +  KAR +FD + 
Sbjct: 145 LASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLV 204

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  V  W +II+ Y+ SG+   +L LF  M    ++ + Y   + L AC    +   G 
Sbjct: 205 LKTPVT-WTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGK 263

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  ++S   + V   N LI  Y +CG++     +  +L+ K+ +SW +M+ G++QN 
Sbjct: 264 QIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNS 323

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++   E+   G KPD+    + +++ G +  L +G+++H+Y IK     D  + N
Sbjct: 324 YDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTN 383

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  ++   RVF  +T    + +  +I GY++      ALE+F+ ++L+ +  
Sbjct: 384 ALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSP 443

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
             +   S+L   + L C+  +K+IHG II+ G S D    +A++DVY KC  I  +R VF
Sbjct: 444 SFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVF 503

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E   +KD+V W S+ S Y     + EA +L+  +  +    +  T  +  +AAS L+ L 
Sbjct: 504 EGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLP 563

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G++ +  +++ G   +  + ++LVDMYA+CG+++ A K+F+    KD   W SMI+   
Sbjct: 564 HGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYA 623

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG+ + A+ +F  M + +  P+++TF+++L ACSH G + +G +    M   Y ++P  
Sbjct: 624 QHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSM-ARYGIEPGI 682

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYA +V LLGRA  L EA +F+  M I P A VW +LL ACRV  N EL +  A+  + 
Sbjct: 683 EHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAIS 742

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           +DP + G+YV++SN+FA+   W DV+++R++M  +G+ K PG SWIE+  ++H F++RDK
Sbjct: 743 IDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDK 802

Query: 720 SHSESDEIYKKLAEITEKLEREG 742
            H E+D IY  L E+T +++  G
Sbjct: 803 VHDETDLIYLALDELTTQMKDVG 825



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 178/602 (29%), Positives = 310/602 (51%), Gaps = 9/602 (1%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           K+H  V+  G     F+ N L+  Y K      A  LFD+M  + ++V W+S++S Y+  
Sbjct: 61  KVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNR-NLVSWSSVVSMYTQL 119

Query: 139 GQCLEALGLFREMQRVGL-VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
           G   +AL  F E QR  +   N Y   + ++AC        G ++H+  +KSG    VYV
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYV 179

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
             +L+ +YA+ G++ +A  V   L  K  V+W +++TG+ ++     ++Q F  +  +  
Sbjct: 180 GTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNV 239

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
            PD+    + ++A   LG L  GK++HAY ++     D+   N L+D Y KC  V     
Sbjct: 240 IPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKA 299

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           +F ++  ++ ISWTT+IAGY QN+   +A+EL   +   G   D     SVL +C  +  
Sbjct: 300 LFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDA 359

Query: 378 MSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           +   ++IH Y+I+  L  D  + NA++D+Y KC  +D ++ VF+ +    VV + +MI  
Sbjct: 360 LQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEG 419

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           Y   G    ALE+F  M   +V    +T VS L  +++L  L+  K+++G II+ GF+L+
Sbjct: 420 YSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLD 479

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
              +S+L+D+Y++C  +  A  VF     KD+++W S+ +   L  + + A  L+  ++ 
Sbjct: 480 KFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQL 539

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHL 615
               P+  TF AL  A S    +  G++F  ++M+   + DP+  +   LVD+  +   +
Sbjct: 540 SRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITN--ALVDMYAKCGSV 597

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           EEA +   S   + TA  W +++     H   E    + + ++  +  NP NYV   +V 
Sbjct: 598 EEAEKIFSSSVWKDTA-CWNSMISMYAQHGKVEEALRMFETMVS-NNINP-NYVTFVSVL 654

Query: 676 AA 677
           +A
Sbjct: 655 SA 656



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 157/552 (28%), Positives = 267/552 (48%), Gaps = 9/552 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G +  A  +FD +  +T  TW A++  Y  +G     L+ ++ M    +  D + 
Sbjct: 186 LYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYV 245

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ AC++L  L  G +IH  VL+          N L+  Y KC   +  + LFDR+ 
Sbjct: 246 LSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLD 305

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +++ W ++I+ Y  +    EA+ L  EM R+G   + Y   + L +C        G 
Sbjct: 306 VK-NIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGR 364

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH+  +K       +V NALI MY++C  + +A  V   +     V +N+M+ G+ +  
Sbjct: 365 QIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQG 424

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             C A++ F+E++     P  +  V+ +  S  L  L   K++H   IK GF  D    +
Sbjct: 425 YLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSS 484

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK---ALELFRTVQLEG 357
            L+D+Y+KC C+     VF   T +D + W ++ +GY   N  LK   A +L+  +QL  
Sbjct: 485 ALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGY---NLQLKSEEAFKLYSDLQLSR 541

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
              +     ++  A S L  +   ++ H  +++ GL SD  I NA+VD+Y KCG+++ + 
Sbjct: 542 ERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAE 601

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F S   KD   W SMIS Y  +G   EAL +F  M   N+  + +T VS LSA S + 
Sbjct: 602 KIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVG 661

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL-WTSMI 535
            ++ G +    + R G        +S+V +  R G L  A +    +  +   L W S++
Sbjct: 662 FVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLL 721

Query: 536 NANGLHGRGKVA 547
           +A  + G  ++A
Sbjct: 722 SACRVFGNVELA 733



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 142/556 (25%), Positives = 275/556 (49%), Gaps = 20/556 (3%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   V  G    V+++N L+  Y + G + +A  +  ++ N++ VSW+S+++ + Q  
Sbjct: 61  KVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLG 120

Query: 241 LYCKAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              KA+ +F E Q     K ++    + + A  +      G ++H+Y IK GF  D+ +G
Sbjct: 121 YNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVG 180

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            +L+ +YAK   ++    VF  +  +  ++WT II GY ++     +L+LF  +    + 
Sbjct: 181 TSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVI 240

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            D  ++ S+L ACS L  +   K+IH Y++R     D+   N ++D Y KCG +   + +
Sbjct: 241 PDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKAL 300

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ ++ K+++SWT+MI+ Y+ N    EA+EL   M     + D     S L++  S+  L
Sbjct: 301 FDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDAL 360

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + G++++ ++I+     +  V ++L+DMY++C ALD A +VF+ V    ++ + +MI   
Sbjct: 361 QHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGY 420

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDP 597
              G    A+++F +M  +  +P  +TF++LL   +    +   K+    I++  + LD 
Sbjct: 421 SRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDK 480

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
           +    + L+D+  + + + +A ++V          VW +L        N +L    A KL
Sbjct: 481 FTS--SALIDVYSKCSCIRDA-RYVFEGTTNKDIVVWNSLFSG----YNLQLKSEEAFKL 533

Query: 658 ---LELDPGNPGNYVLISNVFAAS--RKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
              L+L    P  +   +   AAS        +Q   ++   GL+  P      I N + 
Sbjct: 534 YSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPF-----ITNALV 588

Query: 713 SFIARDKSHSESDEIY 728
              A+  S  E+++I+
Sbjct: 589 DMYAKCGSVEEAEKIF 604



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 176/368 (47%), Gaps = 18/368 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC ++ DA+++FD V+  +V  +NAM+  Y   G     LE +  MR+  +S    T
Sbjct: 388 MYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLT 447

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++   A L  L    +IHGL++K G+    F  ++L+ +Y+KC   R AR +F+   
Sbjct: 448 FVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTT 507

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+V+WNS+ S Y+   +  EA  L+ ++Q      N +TF A   A    +    G 
Sbjct: 508 NK-DIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQ 566

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   +K G     ++ NAL+ MYA+CG + EA  +      KD+  WNSM++ + Q+ 
Sbjct: 567 QFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHG 626

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG----KELHAYAIKQGFVSDL 296
              +A++ F  +      P+ V  V+ +SA   +G + +G      +  Y I+ G     
Sbjct: 627 KVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMARYGIEPG----- 681

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
                 ++ YA    V  +GR      A++FI   TI          L A  +F  V+L 
Sbjct: 682 ------IEHYAS--VVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELA 733

Query: 357 GLDADVMI 364
              A++ I
Sbjct: 734 KHAAEMAI 741



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 193/389 (49%), Gaps = 16/389 (4%)

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGR-LGNLLNG----------KELHAYAIKQGF 292
           ++ +FF  +    Q      +   V   GR L NLL            +++H   +  G 
Sbjct: 12  RSCKFFSSISPNVQPMLPSFSSQNVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGL 71

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
             D+ + N L+  Y K   V   G +F +M  ++ +SW+++++ Y Q   + KAL  F  
Sbjct: 72  QYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLE 131

Query: 353 VQLEGLDA-DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
            Q   +D  +  I+ S++ AC          ++H Y+I+ G   D+ +  ++V +Y K G
Sbjct: 132 FQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHG 191

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            ID +R VF+ +  K  V+WT++I+ Y  +G +  +L+LF LM E+NV  D   L S L+
Sbjct: 192 EIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILN 251

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           A S L  LK GK+++ +++R    ++ S  + L+D Y +CG +     +F+ +  K++I 
Sbjct: 252 ACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIIS 311

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IM 589
           WT+MI     +     A++L  +M    + PD     ++L +C     +  G++    ++
Sbjct: 312 WTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVI 371

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEA 618
           +   + D +  +   L+D+  + N L++A
Sbjct: 372 KVCLEHDNFVTN--ALIDMYSKCNALDDA 398


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/758 (32%), Positives = 415/758 (54%), Gaps = 4/758 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A  LFD +    V +WNA++  Y   G     ++ +  M   G+S D  TF
Sbjct: 93  YSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTF 152

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++K+C+ L++L  G ++H L +K G +      ++LV MY KC     A   F  M E
Sbjct: 153 AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE 212

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + + V W + I+    + Q +  L LF EMQR+GL  +  ++ +A ++C   S    G +
Sbjct: 213 R-NWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQ 271

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  +K+  +    V  A++ +YA+   +T+A    + L N    + N+M+ G V+  L
Sbjct: 272 LHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGL 331

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +AM  F+ +  +  + D V      SA         G+++H  AIK GF  D+ + N 
Sbjct: 332 GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA 391

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++D+Y KC  +     +F  M  +D +SW  IIA   QN  +   +  F  +   G+  D
Sbjct: 392 VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPD 451

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFE 420
               GSVL AC+ L+ +     +H  +I+ GL SD  + + +VD+Y KCG ID ++ + +
Sbjct: 452 DFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHD 511

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            I  + VVSW +++S +  N  + EA + F  M +  ++ D  T  + L   ++L+ ++ 
Sbjct: 512 RIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIEL 571

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++G II++    +  ++S+LVDMYA+CG +  +  VF  V+ +D + W +MI    L
Sbjct: 572 GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 631

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG G  A+ +F +M+ E+  P+H TF+A+L ACSH GL ++G ++  +M   Y+L+P  E
Sbjct: 632 HGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLE 691

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           H+AC+VD+LGR+   +EA +F+ SM  +  A +W  LL  C++  + E+ E+ A  +L L
Sbjct: 692 HFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLL 751

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP +   Y+L+SNV+A S KW DV + R  ++   LKK PG SWIE+ +++H F+  DK+
Sbjct: 752 DPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKA 811

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
           H  S E+Y+ L ++  +++  G       FV   V+EE
Sbjct: 812 HPRSGELYEMLNDLIGEMKLSGYEPDSASFV--EVDEE 847



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 273/540 (50%), Gaps = 6/540 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC S+ DA   F  + +R   +W A +   V N + +R LE +  M+ LG+ V   +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +    ++CA +  L+ G ++H   +K  + S   +  ++V +YAK      AR+ F  + 
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL- 311

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
               V   N+++     +G  +EA+GLF+ M R  +  +  +      AC ++     G 
Sbjct: 312 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 371

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +KSG ++ + V NA++ +Y +C  + EA  +   ++ KDSVSWN+++    QN 
Sbjct: 372 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 431

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            Y   +  F E+   G KPD     + + A   L +L  G  +H   IK G  SD  + +
Sbjct: 432 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 491

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           T++DMY KC  ++   ++  ++  Q  +SW  I++G++ N    +A + F  +   GL  
Sbjct: 492 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKP 551

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     +VL  C+ L  +   K+IHG II++  L D  I + +VD+Y KCG++  S  VF
Sbjct: 552 DHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF 611

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +E +D VSW +MI  Y  +GL  EAL +F  M + NV  +  T V+ L A S + +  
Sbjct: 612 EKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFD 671

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
            G      ++   + LE  +   + +VD+  R      A K  N +  + D ++W ++++
Sbjct: 672 DGCRYF-HLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 263/529 (49%), Gaps = 33/529 (6%)

Query: 88  GYDSTDFIVNSLVAM-------------------------------YAKCYDFRKARQLF 116
           G+  T F+ N L+ M                               Y+   D   A  LF
Sbjct: 47  GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           D M +  DVV WN+++S Y   G   E++ LF EM R G+  +  TF   L++C      
Sbjct: 107 DGMPDP-DVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +LG+++HA  VK+G  + V   +AL+ MY +C  + +A    Y +  ++ VSW + + G 
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 225

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           VQN+ Y + ++ F E+Q  G    Q    +A  +   +  L  G++LHA+AIK  F SD 
Sbjct: 226 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 285

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +G  ++D+YAK   +    R F+ +      +   ++ G  +    ++A+ LF+ +   
Sbjct: 286 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 345

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
            +  DV+ +  V  AC+  K   Q +++H   I+ G   D+ + NA++D+YGKC  +  +
Sbjct: 346 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 405

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             +F+ ++ KD VSW ++I++   NG  ++ +  F  M    ++ D  T  S L A ++L
Sbjct: 406 YLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAAL 465

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             L+ G  ++  +I+ G   +  VAS++VDMY +CG +D A K+ + +  + ++ W +++
Sbjct: 466 RSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAIL 525

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           +   L+   + A   F +M      PDH TF  +L  C++   I  GK+
Sbjct: 526 SGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 574



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 192/377 (50%), Gaps = 4/377 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGKC ++++A  +F  + Q+   +WNA++ A   NG     +  ++ M   G+  D FT
Sbjct: 395 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 454

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+KACA L+ L+ G  +H  V+K G  S  F+ +++V MY KC    +A++L DR+G
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG 514

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            ++ VV WN+I+S +S + +  EA   F EM  +GL  + +TF   L  C + +   LG 
Sbjct: 515 GQQ-VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 573

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K       Y+++ L+ MYA+CG M ++  V  ++E +D VSWN+M+ G+  + 
Sbjct: 574 QIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHG 633

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDLQIG 299
           L  +A++ F  +Q     P+    V  + A   +G   +G +  H           L+  
Sbjct: 634 LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHF 693

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIA-GYAQNNCHLKALELFRTVQLEG 357
             ++D+  +        +    M  Q D + W T+++    + +  +  L     + L+ 
Sbjct: 694 ACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDP 753

Query: 358 LDADVMIIGSVLMACSG 374
            D+ V I+ S + A SG
Sbjct: 754 DDSSVYILLSNVYAESG 770



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 175/386 (45%), Gaps = 36/386 (9%)

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT--------------- 332
           +  GFV    + N L+ MYA+C       RVF  M  +D +SW T               
Sbjct: 44  VVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 103

Query: 333 ----------------IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
                           +++GY Q     ++++LF  +   G+  D      +L +CS L+
Sbjct: 104 ALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALE 163

Query: 377 CMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +S   ++H   ++ GL  D+   +A+VD+YGKC ++D +   F  +  ++ VSW + I+
Sbjct: 164 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA 223

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
             V N      LELF  M    +     +  SA  + +++S L  G++L+   I+  F+ 
Sbjct: 224 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 283

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  V +++VD+YA+  +L  A + F  +    +    +M+      G G  A+ LF  M 
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANH 614
             S   D ++   +  AC+ +    +G++   + ++  + +D    +   ++DL G+   
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN--AVLDLYGKCKA 401

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGA 640
           L EAY   + M+ + +   W A++ A
Sbjct: 402 LMEAYLIFQGMKQKDSVS-WNAIIAA 426



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 35/186 (18%)

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---------- 537
           ++  GF     V++ L+ MYARC     A +VF+ +  +D + W +M+ A          
Sbjct: 43  MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102

Query: 538 -------------------NGLHGRG--KVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
                              +G   RG  + ++DLF +M     +PD  TF  LL +CS  
Sbjct: 103 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162

Query: 577 GLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
             ++ G +   + ++   ++D      + LVD+ G+   L++A  F   M  E     W 
Sbjct: 163 EELSLGVQVHALAVKTGLEID--VRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWG 219

Query: 636 ALLGAC 641
           A +  C
Sbjct: 220 AAIAGC 225


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/758 (32%), Positives = 415/758 (54%), Gaps = 4/758 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A  LFD +    V +WNA++  Y   G     ++ +  M   G+S D  TF
Sbjct: 135 YSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTF 194

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++K+C+ L++L  G ++H L +K G +      ++LV MY KC     A   F  M E
Sbjct: 195 AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE 254

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + + V W + I+    + Q +  L LF EMQR+GL  +  ++ +A ++C   S    G +
Sbjct: 255 R-NWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQ 313

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  +K+  +    V  A++ +YA+   +T+A    + L N    + N+M+ G V+  L
Sbjct: 314 LHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGL 373

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +AM  F+ +  +  + D V      SA         G+++H  AIK GF  D+ + N 
Sbjct: 374 GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA 433

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++D+Y KC  +     +F  M  +D +SW  IIA   QN  +   +  F  +   G+  D
Sbjct: 434 VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPD 493

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFE 420
               GSVL AC+ L+ +     +H  +I+ GL SD  + + +VD+Y KCG ID ++ + +
Sbjct: 494 DFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHD 553

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            I  + VVSW +++S +  N  + EA + F  M +  ++ D  T  + L   ++L+ ++ 
Sbjct: 554 RIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIEL 613

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++G II++    +  ++S+LVDMYA+CG +  +  VF  V+ +D + W +MI    L
Sbjct: 614 GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 673

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG G  A+ +F +M+ E+  P+H TF+A+L ACSH GL ++G ++  +M   Y+L+P  E
Sbjct: 674 HGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLE 733

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           H+AC+VD+LGR+   +EA +F+ SM  +  A +W  LL  C++  + E+ E+ A  +L L
Sbjct: 734 HFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLL 793

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP +   Y+L+SNV+A S KW DV + R  ++   LKK PG SWIE+ +++H F+  DK+
Sbjct: 794 DPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKA 853

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
           H  S E+Y+ L ++  +++  G       FV   V+EE
Sbjct: 854 HPRSGELYEMLNDLIGEMKLSGYEPDSASFV--EVDEE 889



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 273/540 (50%), Gaps = 6/540 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC S+ DA   F  + +R   +W A +   V N + +R LE +  M+ LG+ V   +
Sbjct: 235 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 294

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +    ++CA +  L+ G ++H   +K  + S   +  ++V +YAK      AR+ F  + 
Sbjct: 295 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL- 353

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
               V   N+++     +G  +EA+GLF+ M R  +  +  +      AC ++     G 
Sbjct: 354 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 413

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +KSG ++ + V NA++ +Y +C  + EA  +   ++ KDSVSWN+++    QN 
Sbjct: 414 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 473

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            Y   +  F E+   G KPD     + + A   L +L  G  +H   IK G  SD  + +
Sbjct: 474 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 533

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           T++DMY KC  ++   ++  ++  Q  +SW  I++G++ N    +A + F  +   GL  
Sbjct: 534 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKP 593

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     +VL  C+ L  +   K+IHG II++  L D  I + +VD+Y KCG++  S  VF
Sbjct: 594 DHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF 653

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +E +D VSW +MI  Y  +GL  EAL +F  M + NV  +  T V+ L A S + +  
Sbjct: 654 EKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFD 713

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
            G      ++   + LE  +   + +VD+  R      A K  N +  + D ++W ++++
Sbjct: 714 DGCRYF-HLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 263/529 (49%), Gaps = 33/529 (6%)

Query: 88  GYDSTDFIVNSLVAM-------------------------------YAKCYDFRKARQLF 116
           G+  T F+ N L+ M                               Y+   D   A  LF
Sbjct: 89  GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 148

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           D M +  DVV WN+++S Y   G   E++ LF EM R G+  +  TF   L++C      
Sbjct: 149 DGMPDP-DVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 207

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +LG+++HA  VK+G  + V   +AL+ MY +C  + +A    Y +  ++ VSW + + G 
Sbjct: 208 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 267

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           VQN+ Y + ++ F E+Q  G    Q    +A  +   +  L  G++LHA+AIK  F SD 
Sbjct: 268 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 327

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +G  ++D+YAK   +    R F+ +      +   ++ G  +    ++A+ LF+ +   
Sbjct: 328 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 387

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
            +  DV+ +  V  AC+  K   Q +++H   I+ G   D+ + NA++D+YGKC  +  +
Sbjct: 388 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 447

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             +F+ ++ KD VSW ++I++   NG  ++ +  F  M    ++ D  T  S L A ++L
Sbjct: 448 YLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAAL 507

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             L+ G  ++  +I+ G   +  VAS++VDMY +CG +D A K+ + +  + ++ W +++
Sbjct: 508 RSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAIL 567

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           +   L+   + A   F +M      PDH TF  +L  C++   I  GK+
Sbjct: 568 SGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 616



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 192/377 (50%), Gaps = 4/377 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGKC ++++A  +F  + Q+   +WNA++ A   NG     +  ++ M   G+  D FT
Sbjct: 437 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 496

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+KACA L+ L+ G  +H  V+K G  S  F+ +++V MY KC    +A++L DR+G
Sbjct: 497 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG 556

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            ++ VV WN+I+S +S + +  EA   F EM  +GL  + +TF   L  C + +   LG 
Sbjct: 557 GQQ-VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 615

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K       Y+++ L+ MYA+CG M ++  V  ++E +D VSWN+M+ G+  + 
Sbjct: 616 QIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHG 675

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDLQIG 299
           L  +A++ F  +Q     P+    V  + A   +G   +G +  H           L+  
Sbjct: 676 LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHF 735

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIA-GYAQNNCHLKALELFRTVQLEG 357
             ++D+  +        +    M  Q D + W T+++    + +  +  L     + L+ 
Sbjct: 736 ACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDP 795

Query: 358 LDADVMIIGSVLMACSG 374
            D+ V I+ S + A SG
Sbjct: 796 DDSSVYILLSNVYAESG 812



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 175/386 (45%), Gaps = 36/386 (9%)

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT--------------- 332
           +  GFV    + N L+ MYA+C       RVF  M  +D +SW T               
Sbjct: 86  VVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 145

Query: 333 ----------------IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
                           +++GY Q     ++++LF  +   G+  D      +L +CS L+
Sbjct: 146 ALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALE 205

Query: 377 CMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +S   ++H   ++ GL  D+   +A+VD+YGKC ++D +   F  +  ++ VSW + I+
Sbjct: 206 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA 265

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
             V N      LELF  M    +     +  SA  + +++S L  G++L+   I+  F+ 
Sbjct: 266 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 325

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  V +++VD+YA+  +L  A + F  +    +    +M+      G G  A+ LF  M 
Sbjct: 326 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 385

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANH 614
             S   D ++   +  AC+ +    +G++   + ++  + +D    +   ++DL G+   
Sbjct: 386 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN--AVLDLYGKCKA 443

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGA 640
           L EAY   + M+ + +   W A++ A
Sbjct: 444 LMEAYLIFQGMKQKDSVS-WNAIIAA 468



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 35/186 (18%)

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---------- 537
           ++  GF     V++ L+ MYARC     A +VF+ +  +D + W +M+ A          
Sbjct: 85  MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 144

Query: 538 -------------------NGLHGRG--KVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
                              +G   RG  + ++DLF +M     +PD  TF  LL +CS  
Sbjct: 145 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 204

Query: 577 GLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
             ++ G +   + ++   ++D      + LVD+ G+   L++A  F   M  E     W 
Sbjct: 205 EELSLGVQVHALAVKTGLEID--VRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWG 261

Query: 636 ALLGAC 641
           A +  C
Sbjct: 262 AAIAGC 267


>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
 gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
          Length = 948

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/851 (29%), Positives = 451/851 (52%), Gaps = 25/851 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   G+  +A ++FD +    + ++ A++ AYV+ G+P   L+     R+     D   
Sbjct: 107 MYAAFGNPGEARRIFDGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPM 166

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM- 119
               ++A  M +DL  G   H  + +CGYD    +  SL+ MY+ C +   A Q FDR  
Sbjct: 167 LAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAF 226

Query: 120 --GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
                 DVV W  I++A +     + AL LF  M+  G+V +   FV  L +        
Sbjct: 227 LRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIA 286

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G  IH+  +         +  A++ MYAR G + +A     +++     +W  ++  + 
Sbjct: 287 QGKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYC 346

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ---GFVS 294
           +   +   MQ    ++  G KP++V  +  +     L  L +GK++ A A +Q      +
Sbjct: 347 RLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLA-LEDGKKIQALASEQQQRSLDA 405

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
             +IG  ++ M+++   +      F +++ +   ++T +IAGYA N    +AL +F+ + 
Sbjct: 406 SARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMI 465

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
              + AD +++   + AC+ +  + + K +H   +  GL  D V+  A+VD+Y +CG+++
Sbjct: 466 RRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSME 525

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  VF  IE  D ++W++MI++   +G    A+ +   M +        T+V  L+A +
Sbjct: 526 DASAVFGEIERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACA 585

Query: 474 SLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
              ++++  ++++  ++  GF+ +  V  +++ MYA+ G++  A   F+ ++  D+  WT
Sbjct: 586 HAGMMEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWT 645

Query: 533 SMINAN---GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           +M+ A    G +     A+ L   M+ +   PD +TF+ +L AC++ G + E  ++ + M
Sbjct: 646 TMLEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDM 705

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN--- 646
           + DY L P  EHY  LVD + R  +L+EA   +R + ++    +W ALL  C+  ++   
Sbjct: 706 KFDYGLVPEMEHYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPR 765

Query: 647 -KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
            + +GEI+ K   +LDP   G + + +       +W++ ++VR  M   G+KK PG S I
Sbjct: 766 TQRVGEIIMKINNKLDPLGTGAHRVAA-------RWEEAKRVRKLMTDRGIKKEPGKSMI 818

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
            I N +H F+A D+SH  + EIY ++  IT  ++++G Y+  T++VLH+V E++K ++L+
Sbjct: 819 SIKNTVHGFVAGDRSHPHTREIYAEVDRITALIKKDG-YIPDTRYVLHDVPEDKKERLLW 877

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHF- 824
            HSERLA+AYG + +  G  +R+ KNLRVC DCH+  KL +++  RE++VRD  RFHHF 
Sbjct: 878 YHSERLAMAYGHMNTPPGQPLRVIKNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFA 937

Query: 825 EAGVCSCGDYW 835
           + G CSCGDYW
Sbjct: 938 KDGTCSCGDYW 948



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/621 (25%), Positives = 305/621 (49%), Gaps = 17/621 (2%)

Query: 35  SNGEPLRVLETYSRM---RVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDS 91
           S GE  R L+ + R+   R     VD++    V++ C  L+ +  GA++H  + +   ++
Sbjct: 39  SRGEEFRELQEFLRIIDARDEPFDVDSYQH--VLQLCTRLRAMAEGARVHDHIRRSRMEA 96

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
             F+ N LV MYA   +  +AR++FD +G   +++ + +I+ AY  +G   EAL +    
Sbjct: 97  ERFVGNDLVFMYAAFGNPGEARRIFDGLGS-HNILSFTAIMRAYVTAGDPDEALKILHLA 155

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
           +      +      A++A       +LG   H    + G +L   VA +LI MY+ CG++
Sbjct: 156 RLKAFKADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEI 215

Query: 212 TEAAGVL----YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
             A         +  + D VSW  +L    ++  Y  A+  F  ++  G  PD++C V  
Sbjct: 216 EAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTV 275

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           + +   LG++  GK +H+  + +    D  IG  ++ MYA+   +    R F ++     
Sbjct: 276 LDSVIGLGDIAQGKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGV 335

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
            +WT +I  Y +       +++   ++ EG+  + +   ++L  C  L  +   K+I   
Sbjct: 336 AAWTVLIGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNL-ALEDGKKIQAL 394

Query: 388 IIRKGLSDL----VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
              +    L     I  A++ ++ +  ++  +R  F+ I  K V ++T+MI+ Y +N   
Sbjct: 395 ASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQP 454

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
            EAL +F  M    V +D++ L  A+SA +S+  L++GK L+   +  G + +  V ++L
Sbjct: 455 REALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTAL 514

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           VDMY+RCG+++ A+ VF  ++  D I W++MI A G HG  + A+ +  +M+ + + P  
Sbjct: 515 VDMYSRCGSMEDASAVFGEIERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTG 574

Query: 564 ITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
            T + +L AC+H+G++ E  + +  +  D   D  PE    ++ +  +   ++EA     
Sbjct: 575 ATMVGVLAACAHAGMMEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFD 634

Query: 624 SMQIEPTAEVWCALLGA-CRV 643
            ++  P  + W  +L A CR+
Sbjct: 635 KIE-NPDVKAWTTMLEAYCRL 654


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/710 (34%), Positives = 390/710 (54%), Gaps = 38/710 (5%)

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM--YARCGKMTEAAGV 217
            +  ++ L+ CE  S + L  ++H   +K G N    + N ++        G    A  +
Sbjct: 39  THPLISLLETCE--SMDQL-QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRL 95

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++   +   WN+M+ G+ + D     +  + E+   G KPD+           R   L
Sbjct: 96  FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIAL 155

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G++LH + +K G   ++ +   L+ MY  C  ++    VF      D I+W  II+ Y
Sbjct: 156 EYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAY 215

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDL 396
            +     ++  LF  ++ + +    + +  VL ACS LK +   K++H Y+   K  S+L
Sbjct: 216 NKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL 275

Query: 397 VILNAIVDVYGKCGN-------------------------------IDYSRNVFESIESK 425
           V+ NA++D+Y  CG                                ID +RN F+ +  K
Sbjct: 276 VLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 335

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           D VSWT+MI  Y+ +    EALELF  M   NV+ D  T+VS L+A + L  L+ G+ + 
Sbjct: 336 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 395

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
            +I R     +  V ++L+DMY +CG +D A  +F  +  +D   WT+MI    ++G G+
Sbjct: 396 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 455

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A+D+F  M   S  PD IT++ +L AC+H+GL+++G+K+   M   + ++P   HY CL
Sbjct: 456 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 515

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           VDLL RA  L+EAY+ + +M I+  + VW ALL  CRV+   ++ E+V K++LEL+P N 
Sbjct: 516 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNG 575

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
             YVL+ N++AA ++W D+ ++R  M   G+KK PG S IE+  ++H F+A D+SH ++ 
Sbjct: 576 AVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTK 635

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
            I  KL ++T+ L +  GY      V  ++ EE+K   ++ HSE+LAIA+G++ S  G  
Sbjct: 636 NIDAKLDKMTQDL-KLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVT 694

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           IRITKNLR+C+DCH+  KLVS+++ RE++VRD  RFHHF+ G+CSC DYW
Sbjct: 695 IRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 257/522 (49%), Gaps = 45/522 (8%)

Query: 55  SVDAFTFPC--VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAM--YAKCYDFR 110
           ++ +F+ P   +I      + +D   ++H   +K G ++   + N ++      +  DF+
Sbjct: 31  ALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 90

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
            AR+LFD + E  ++ +WN++I  YS        + L+ EM R G+  + YTF    +  
Sbjct: 91  YARRLFDEIPE-PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 149

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
                   G ++H   +K G    V+V  AL+ MY  CG++  A GV       D ++WN
Sbjct: 150 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 209

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
            +++ + +   + ++ + F  ++     P  V  V  +SA  +L +L  GK++H+Y    
Sbjct: 210 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 269

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA--------------- 335
              S+L + N ++DMYA C  ++    +F  M  +D ISWTTI++               
Sbjct: 270 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 329

Query: 336 ----------------GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
                           GY ++N   +ALELFR +Q   +  D   + SVL AC+ L  + 
Sbjct: 330 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 389

Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             + I  YI R  + +DL + NA++D+Y KCG++D + ++F  +  +D  +WT+MI    
Sbjct: 390 LGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLA 449

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR--KGFNLE 496
            NG   +AL++F  M +A++  D IT +  LSA +   ++ KG++   + +R      +E
Sbjct: 450 VNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHGIE 506

Query: 497 GSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
            ++A    LVD+ AR G L  A +V   +  K + I+W +++
Sbjct: 507 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALL 548



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 218/462 (47%), Gaps = 41/462 (8%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A +LFD++ +  +F WN M+  Y     P   +  Y  M   G+  D +TFP + K    
Sbjct: 92  ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
              L+ G ++HG VLK G     F+  +LV MY  C     AR +FD +  K DV+ WN 
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFD-VCPKADVITWNM 210

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           IISAY+  G+  E+  LF  M+   ++    T V  L AC        G ++H+      
Sbjct: 211 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 270

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLEN--------------------------- 223
               + + NA+I MYA CG+M  A G+   + N                           
Sbjct: 271 VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFD 330

Query: 224 ----KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
               KD VSW +M+ G+++++ + +A++ FR +Q    KPD+   V+ ++A   LG L  
Sbjct: 331 KMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALEL 390

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +  Y  +    +DL + N L+DMY KC  V+    +F +M+ +D  +WT +I G A 
Sbjct: 391 GEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAV 450

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR----KGL-S 394
           N    KAL++F  +    +  D +    VL AC+    + + ++   Y +R     G+  
Sbjct: 451 NGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHGIEP 507

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMIS 435
           ++     +VD+  + G +  +  V E++  K + + W ++++
Sbjct: 508 NIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLA 549



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 183/382 (47%), Gaps = 61/382 (15%)

Query: 257 QKPDQVCTVNAVSASGR--------LGNLLNG-------KELHAYAIKQGFVSDLQIGNT 301
           +KP Q+ T+ A S++ +        L +LL         +++H  AIK+G  ++  + N 
Sbjct: 17  KKPKQMTTIAATSSALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNR 76

Query: 302 LMDMYAKCCCVN------YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           +M      CC +      Y  R+F ++   +   W T+I GY++ +     + L+  +  
Sbjct: 77  VMTF----CCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLR 132

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
            G+  D      +    +    +   +++HG++++ GL  ++ +  A+V +Y  CG +D 
Sbjct: 133 RGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDT 192

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R VF+     DV++W  +IS+Y   G   E+  LF +M +  V   ++TLV  LSA S 
Sbjct: 193 ARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSK 252

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGAL------------------- 513
           L  L+ GK+++ ++  K   +E ++   ++++DMYA CG +                   
Sbjct: 253 LKDLRTGKKVHSYV--KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWT 310

Query: 514 ------------DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
                       D+A   F+ +  KD + WT+MI+      R K A++LF  M+A +  P
Sbjct: 311 TIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKP 370

Query: 562 DHITFLALLYACSHSGLINEGK 583
           D  T +++L AC+H G +  G+
Sbjct: 371 DEFTMVSVLTACAHLGALELGE 392



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 163/372 (43%), Gaps = 40/372 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGISVD 57
           MY  CG +  A  +FD   +  V TWN ++ AY   G   E  R+       +VL  +V 
Sbjct: 183 MYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTV- 241

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FR 110
             T   V+ AC+ LKDL  G K+H  V  C  +S   + N+++ MYA C +       FR
Sbjct: 242 --TLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFR 299

Query: 111 K------------------------ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALG 146
                                    AR  FD+M EK D V W ++I  Y  S +  EAL 
Sbjct: 300 SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK-DYVSWTAMIDGYIRSNRFKEALE 358

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           LFR MQ   +  + +T V+ L AC       LG  I     ++     ++V NALI MY 
Sbjct: 359 LFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYF 418

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +CG + +A  +  ++  +D  +W +M+ G   N    KA+  F  +  A   PD++  + 
Sbjct: 419 KCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIG 478

Query: 267 AVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
            +SA    G +  G++       Q G   ++     L+D+ A+   +     V   M  +
Sbjct: 479 VLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIK 538

Query: 326 -DFISWTTIIAG 336
            + I W  ++AG
Sbjct: 539 ANSIVWGALLAG 550


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/758 (32%), Positives = 415/758 (54%), Gaps = 4/758 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A  LFD +    V +WNA++  Y   G     ++ +  M   G+S D  TF
Sbjct: 93  YSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTF 152

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++K+C+ L++L  G ++H L +K G +      ++LV MY KC     A   F  M E
Sbjct: 153 AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE 212

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + + V W + I+    + Q +  L LF EMQR+GL  +  ++ +A ++C   S    G +
Sbjct: 213 R-NWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQ 271

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  +K+  +    V  A++ +YA+   +T+A    + L N    + N+M+ G V+  L
Sbjct: 272 LHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGL 331

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +AM  F+ +  +  + D V      SA         G+++H  AIK GF  D+ + N 
Sbjct: 332 GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA 391

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++D+Y KC  +     +F  M  +D +SW  IIA   QN  +   +  F  +   G+  D
Sbjct: 392 VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPD 451

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFE 420
               GSVL AC+ L+ +     +H  +I+ GL SD  + + +VD+Y KCG ID ++ + +
Sbjct: 452 DFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHD 511

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            I  + VVSW +++S +  N  + EA + F  M +  ++ D  T  + L   ++L+ ++ 
Sbjct: 512 RIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIEL 571

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++G II++    +  ++S+LVDMYA+CG +  +  VF  V+ +D + W +MI    L
Sbjct: 572 GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 631

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG G  A+ +F +M+ E+  P+H TF+A+L ACSH GL ++G ++  +M   Y+L+P  E
Sbjct: 632 HGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLE 691

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           H+AC+VD+LGR+   +EA +F+ SM  +  A +W  LL  C++  + E+ E+ A  +L L
Sbjct: 692 HFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLL 751

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP +   Y+L+SNV+A S KW DV + R  ++   LKK PG SWIE+ +++H F+  DK+
Sbjct: 752 DPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKA 811

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
           H  S E+Y+ L ++  +++  G       FV   V+EE
Sbjct: 812 HPRSGELYEMLNDLIGEMKLSGYEPDSASFV--EVDEE 847



 Score =  255 bits (652), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 273/540 (50%), Gaps = 6/540 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC S+ DA   F  + +R   +W A +   V N + +R LE +  M+ LG+ V   +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +    ++CA +  L+ G ++H   +K  + S   +  ++V +YAK      AR+ F  + 
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL- 311

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
               V   N+++     +G  +EA+GLF+ M R  +  +  +      AC ++     G 
Sbjct: 312 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 371

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +KSG ++ + V NA++ +Y +C  + EA  +   ++ KDSVSWN+++    QN 
Sbjct: 372 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 431

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            Y   +  F E+   G KPD     + + A   L +L  G  +H   IK G  SD  + +
Sbjct: 432 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 491

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           T++DMY KC  ++   ++  ++  Q  +SW  I++G++ N    +A + F  +   GL  
Sbjct: 492 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKP 551

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     +VL  C+ L  +   K+IHG II++  L D  I + +VD+Y KCG++  S  VF
Sbjct: 552 DHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF 611

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +E +D VSW +MI  Y  +GL  EAL +F  M + NV  +  T V+ L A S + +  
Sbjct: 612 EKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFD 671

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
            G      ++   + LE  +   + +VD+  R      A K  N +  + D ++W ++++
Sbjct: 672 DGCRYF-HLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 278/538 (51%), Gaps = 6/538 (1%)

Query: 48  RMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY 107
           RM V G   +AF   C+++  A      C  ++   + +   D+  +  N+++  Y+   
Sbjct: 42  RMVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPR--RDTVSW--NTMLTAYSHAG 97

Query: 108 DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
           D   A  LFD M +  DVV WN+++S Y   G   E++ LF EM R G+  +  TF   L
Sbjct: 98  DISTAVALFDGMPDP-DVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLL 156

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           ++C      +LG+++HA  VK+G  + V   +AL+ MY +C  + +A    Y +  ++ V
Sbjct: 157 KSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWV 216

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           SW + + G VQN+ Y + ++ F E+Q  G    Q    +A  +   +  L  G++LHA+A
Sbjct: 217 SWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 276

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           IK  F SD  +G  ++D+YAK   +    R F+ +      +   ++ G  +    ++A+
Sbjct: 277 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 336

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVY 406
            LF+ +    +  DV+ +  V  AC+  K   Q +++H   I+ G   D+ + NA++D+Y
Sbjct: 337 GLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLY 396

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
           GKC  +  +  +F+ ++ KD VSW ++I++   NG  ++ +  F  M    ++ D  T  
Sbjct: 397 GKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYG 456

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           S L A ++L  L+ G  ++  +I+ G   +  VAS++VDMY +CG +D A K+ + +  +
Sbjct: 457 SVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQ 516

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            ++ W ++++   L+   + A   F +M      PDH TF  +L  C++   I  GK+
Sbjct: 517 QVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 574



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 221/460 (48%), Gaps = 35/460 (7%)

Query: 150 EMQRVGLVTNA-YTFVAALQACEDSSFETLGMEIHAAT--VKSGQNLQVYVANALIAMYA 206
           E Q+   V  A  TF    Q+C  +  E L     A    V SG     +V+N L+ MYA
Sbjct: 4   EQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYA 63

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLT-------------------------------G 235
           RC     A  V   +  +D+VSWN+MLT                               G
Sbjct: 64  RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG 123

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           + Q  ++ +++  F E+   G  PD+      + +   L  L  G ++HA A+K G   D
Sbjct: 124 YCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEID 183

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           ++ G+ L+DMY KC  ++     FY M  ++++SW   IAG  QN  +++ LELF  +Q 
Sbjct: 184 VRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR 243

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDY 414
            GL        S   +C+ + C++  +++H + I+ K  SD V+  AIVDVY K  ++  
Sbjct: 244 LGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTD 303

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R  F  + +  V +  +M+   V  GL  EA+ LF  M  +++  D ++L    SA + 
Sbjct: 304 ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAE 363

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
                +G++++   I+ GF+++  V ++++D+Y +C AL  A  +F  ++ KD + W ++
Sbjct: 364 TKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAI 423

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           I A   +G     I  F +M      PD  T+ ++L AC+
Sbjct: 424 IAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 463



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 192/377 (50%), Gaps = 4/377 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGKC ++++A  +F  + Q+   +WNA++ A   NG     +  ++ M   G+  D FT
Sbjct: 395 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 454

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+KACA L+ L+ G  +H  V+K G  S  F+ +++V MY KC    +A++L DR+G
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG 514

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            ++ VV WN+I+S +S + +  EA   F EM  +GL  + +TF   L  C + +   LG 
Sbjct: 515 GQQ-VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 573

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K       Y+++ L+ MYA+CG M ++  V  ++E +D VSWN+M+ G+  + 
Sbjct: 574 QIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHG 633

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDLQIG 299
           L  +A++ F  +Q     P+    V  + A   +G   +G +  H           L+  
Sbjct: 634 LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHF 693

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIA-GYAQNNCHLKALELFRTVQLEG 357
             ++D+  +        +    M  Q D + W T+++    + +  +  L     + L+ 
Sbjct: 694 ACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDP 753

Query: 358 LDADVMIIGSVLMACSG 374
            D+ V I+ S + A SG
Sbjct: 754 DDSSVYILLSNVYAESG 770



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 6/194 (3%)

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           D V  N ++  Y   G+I  +  +F+ +   DVVSW +++S Y   G+  E+++LF  M 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              V  D  T    L + S+L  L  G +++   ++ G  ++    S+LVDMY +C +LD
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201

Query: 515 IANKVFNCVQTKDLILWTSMINA---NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            A   F  +  ++ + W + I     N  + RG   ++LF +M+         ++ +   
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRG---LELFIEMQRLGLGVSQPSYASAFR 258

Query: 572 ACSHSGLINEGKKF 585
           +C+    +N G++ 
Sbjct: 259 SCAAMSCLNTGRQL 272



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 35/186 (18%)

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---------- 537
           ++  GF     V++ L+ MYARC     A +VF+ +  +D + W +M+ A          
Sbjct: 43  MVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102

Query: 538 -------------------NGLHGRG--KVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
                              +G   RG  + ++DLF +M     +PD  TF  LL +CS  
Sbjct: 103 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162

Query: 577 GLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
             ++ G +   + ++   ++D      + LVD+ G+   L++A  F   M  E     W 
Sbjct: 163 EELSLGVQVHALAVKTGLEID--VRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWG 219

Query: 636 ALLGAC 641
           A +  C
Sbjct: 220 AAIAGC 225


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/722 (36%), Positives = 413/722 (57%), Gaps = 29/722 (4%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSL-VAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
           G K+  L++   +     I N   V+ +      +     FD + +  DV  WN +IS Y
Sbjct: 2   GMKVKRLMMFTHFSDIALICNQPNVSTHVSLSPNKSKMHTFDHI-QNRDVYAWNLMISGY 60

Query: 136 SASGQCLEALGLFRE-MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
             +G   E +  F   M   GL  +  TF + L+AC        G +IH   +K G    
Sbjct: 61  GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFGFMWD 117

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           VYVA +LI +Y+R   +  A  +  ++  +D  SWN+M++G+ Q+    +A+     L+ 
Sbjct: 118 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 177

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
                D V  V+ +SA    G+   G  +H+Y+IK G  S+L     L D      C   
Sbjct: 178 M----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL-----LRD------C--- 219

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             +VF +M  +D ISW +II  Y  N   L+A+ LF+ ++L  +  D + + S+    S 
Sbjct: 220 -QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 278

Query: 375 LKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
           L  +   + + G+ +RKG  L D+ I NA+V +Y K G +D +R VF  + + DV+SW +
Sbjct: 279 LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 338

Query: 433 MISSYVHNGLANEALELFYLMNE-ANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           +IS Y  NG A+EA+E++ +M E   + ++  T VS L A S    L++G +L+G +++ 
Sbjct: 339 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 398

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           G  L+  V +SL DMY +CG L+ A  +F  +   + + W ++I  +G HG G+ A+ LF
Sbjct: 399 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 458

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
            +M  E   PDHITF+ LL ACSHSGL++EG+   E+M+ DY + P  +HY C+VD+ GR
Sbjct: 459 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 518

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
           A  LE A +F++SM ++P A +W ALL ACRVH N +LG+I ++ L E++P + G +VL+
Sbjct: 519 AGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLL 578

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           SN++A++ KW+ V+++R    G GL+KTPG S +E+ NK+  F   +++H   +E+Y++L
Sbjct: 579 SNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYREL 638

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKN 791
             +  KL +  GYV   +FVL +VE++EK  +L  HSERLAIA+ ++ +   + IRI KN
Sbjct: 639 TALQAKL-KMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKN 697

Query: 792 LR 793
           LR
Sbjct: 698 LR 699



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 167/566 (29%), Positives = 301/566 (53%), Gaps = 39/566 (6%)

Query: 15  FDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAFTFPCVIKACAMLKD 73
           FD +  R V+ WN M+  Y   G    V+  +S  M   G++ D  TFP V+KAC  + D
Sbjct: 42  FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 101

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
              G KIH L LK G+    ++  SL+ +Y++      AR LFD M  + D+  WN++IS
Sbjct: 102 ---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMIS 157

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
            Y  SG   EAL L   ++ +    ++ T V+ L AC ++     G+ IH+ ++K G   
Sbjct: 158 GYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 213

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
           ++               + +   V  ++  +D +SWNS++  +  N+   +A+  F+E++
Sbjct: 214 EL---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 258

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCV 312
            +  +PD +  ++  S   +LG++   + +  + +++G F+ D+ IGN ++ MYAK   V
Sbjct: 259 LSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV 318

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMA 371
           +    VF  +   D ISW TII+GYAQN    +A+E++  ++ EG + A+     SVL A
Sbjct: 319 DSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPA 378

Query: 372 CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           CS    + Q  ++HG +++ GL  D+ ++ ++ D+YGKCG ++ + ++F  I   + V W
Sbjct: 379 CSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPW 438

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
            ++I+ +  +G   +A+ LF  M +  V+ D IT V+ LSA S   ++ +G+     +++
Sbjct: 439 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE-MMQ 497

Query: 491 KGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---G 544
             + +  S+     +VDMY R G L+ A K    +  + D  +W ++++A  +HG    G
Sbjct: 498 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 557

Query: 545 KVAIDLFYKMEAESFAPDHITFLALL 570
           K+A +  +++E     P+H+ +  LL
Sbjct: 558 KIASEHLFEVE-----PEHVGYHVLL 578



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 211/446 (47%), Gaps = 35/446 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y +  +V +A  LFD++  R + +WNAM+  Y  +G     L   + +R +    D+ T
Sbjct: 127 LYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVT 182

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ AC    D + G  IH   +K G +S                  R  +++FDRM 
Sbjct: 183 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESE---------------LLRDCQKVFDRMY 227

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D++ WNSII AY  + Q L A+ LF+EM+   +  +  T ++               
Sbjct: 228 VR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 286

Query: 181 EIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +   T++ G  L+ + + NA++ MYA+ G +  A  V   L N D +SWN++++G+ QN
Sbjct: 287 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 346

Query: 240 DLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
               +A++ +  ++  G+   +Q   V+ + A  + G L  G +LH   +K G   D+ +
Sbjct: 347 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 406

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             +L DMY KC  +     +FYQ+   + + W T+IA +  +    KA+ LF+ +  EG+
Sbjct: 407 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 466

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             D +   ++L ACS       G  C    +  +G         L     +VD+YG+ G 
Sbjct: 467 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT-----PSLKHYGCMVDMYGRAGQ 521

Query: 412 IDYSRNVFESIE-SKDVVSWTSMISS 436
           ++ +    +S+    D   W +++S+
Sbjct: 522 LETALKFIKSMSLQPDASIWGALLSA 547



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 3/141 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + DA  LF ++ +     WN ++  +  +G   + +  +  M   G+  D  T
Sbjct: 413 MYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHIT 472

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN--SLVAMYAKCYDFRKARQLFDR 118
           F  ++ AC+    +D G     + ++  Y  T  + +   +V MY +      A +    
Sbjct: 473 FVTLLSACSHSGLVDEGQWCFEM-MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKS 531

Query: 119 MGEKEDVVLWNSIISAYSASG 139
           M  + D  +W +++SA    G
Sbjct: 532 MSLQPDASIWGALLSACRVHG 552


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/640 (37%), Positives = 372/640 (58%), Gaps = 44/640 (6%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           L+  YA    +  A  V  ++  ++ +  N M+  +V N  Y + ++ F  + G   +PD
Sbjct: 80  LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139

Query: 261 Q---VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
                C + A S SG    ++ G+++H  A K G  S L +GN L+ MY KC  ++    
Sbjct: 140 HYTFPCVLKACSCSG---TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           V  +M+ +D +SW +++ GYAQN     ALE+ R ++   +  D   + S+L A S    
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS---- 252

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
            + T E                           N+ Y +++F  +  K +VSW  MI  Y
Sbjct: 253 -NTTTE---------------------------NVMYVKDMFFKMGKKSLVSWNVMIGVY 284

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           + N +  EA+EL+  M     E D++++ S L A    S L  GK+++G+I RK      
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            + ++L+DMYA+CG L+ A  VF  ++++D++ WT+MI+A G  GRG  A+ LF K++  
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              PD I F+  L ACSH+GL+ EG+   ++M   Y++ P  EH AC+VDLLGRA  ++E
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           AY+F++ M +EP   VW ALLGACRVHS+ ++G + A KL +L P   G YVL+SN++A 
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           + +W++V  +R  M+  GLKK PG+S +E+   IH+F+  D+SH +SDEIY++L  + +K
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKK 584

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE-----GSLIRITKNL 792
           + +E GYV  ++  LH+VEEE+K   L  HSE+LAI + ++ + E      + IRITKNL
Sbjct: 585 M-KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNL 643

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           R+C DCH   KL+S++  RE+++RD NRFH F  GVCSC 
Sbjct: 644 RICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 204/413 (49%), Gaps = 36/413 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y     V  A ++FD++ +R V   N M+ +YV+NG     ++ +  M    +  D +TF
Sbjct: 84  YASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTF 143

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           PCV+KAC+    +  G KIHG   K G  ST F+ N LV+MY KC    +AR + D M  
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV WNS++  Y+ + +  +AL + REM+ V +  +A T  + L A  +++ E +   
Sbjct: 204 R-DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--- 259

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
                        +YV +    M+ + GK             K  VSWN M+  +++N +
Sbjct: 260 -------------MYVKD----MFFKMGK-------------KSLVSWNVMIGVYMKNAM 289

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ +  ++  G +PD V   + + A G    L  GK++H Y  ++  + +L + N 
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC C+     VF  M ++D +SWT +I+ Y  +     A+ LF  +Q  GL  D
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNI 412
            +   + L ACS    + + +     +    K    L  L  +VD+ G+ G +
Sbjct: 410 SIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 462



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 34/281 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + +A  + D++S+R V +WN+++  Y  N      LE    M  + IS DA T
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A +                     +T+ +      MY K         +F +MG
Sbjct: 244 MASLLPAVSNT-------------------TTENV------MYVK--------DMFFKMG 270

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K  +V WN +I  Y  +   +EA+ L+  M+  G   +A +  + L AC D+S  +LG 
Sbjct: 271 KKS-LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH    +      + + NALI MYA+CG + +A  V   ++++D VSW +M++ +  + 
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             C A+  F +LQ +G  PD +  V  ++A    G L  G+
Sbjct: 390 RGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 8/222 (3%)

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYSRNV 418
           V ++G VL     ++ +   + +H  II + L   S L +   ++  Y    ++  +R V
Sbjct: 42  VFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGV--KLMRAYASLKDVASARKV 96

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ I  ++V+    MI SYV+NG   E +++F  M   NV  D  T    L A S    +
Sbjct: 97  FDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTI 156

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             G++++G   + G +    V + LV MY +CG L  A  V + +  +D++ W S++   
Sbjct: 157 VIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGY 216

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
             + R   A+++  +ME+   + D  T  +LL A S++   N
Sbjct: 217 AQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 6/107 (5%)

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---N 538
           + ++  II +      S+   L+  YA    +  A KVF+ +  +++I+   MI +   N
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           G +G G   + +F  M   +  PDH TF  +L ACS SG I  G+K 
Sbjct: 119 GFYGEG---VKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/742 (34%), Positives = 407/742 (54%), Gaps = 62/742 (8%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N++++ Y +   F  AR LFD+M E+ D+  WN +++ Y  + +  +A  LF  M    +
Sbjct: 84  NAMISGYLRNSKFNLARNLFDQMPER-DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDV 142

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           V+                                        N+L++ YA+ G + EA  
Sbjct: 143 VS---------------------------------------WNSLLSGYAQNGYVDEARE 163

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V   +  K+S+SWN +L  +V N    +A   F        K D     + +S +  +G 
Sbjct: 164 VFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE------SKSDW----DLISWNCLMGG 213

Query: 277 LLNGKEL--HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
            +  K+L    +   +  V D    NT++  YA+   ++   R+F +   +D  +WT ++
Sbjct: 214 FVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMV 273

Query: 335 AGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           +GY QN    +A   F  +  +  +  + MI G V       K M   +E+   +  + +
Sbjct: 274 SGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQT-----KKMDIARELFESMPCRNI 328

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
           S     N ++  YG+ G+I  +R  F+ +  +D VSW ++I+ Y  +G   EAL +F  +
Sbjct: 329 SSW---NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
            +     +  T   ALS  + ++ L+ GK+++G  ++ G+     V ++L+ MY +CG++
Sbjct: 386 KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSI 445

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
           D AN  F  ++ KD++ W +M+     HG G+ A+ +F  M+     PD IT + +L AC
Sbjct: 446 DEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           SH+GL++ G ++   M  DY + P  +HY C++DLLGRA  LEEA   +R+M  +P A  
Sbjct: 506 SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAAS 565

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
           W ALLGA R+H N ELGE  A+ + +++P N G YVL+SN++AAS +W D +++R +MR 
Sbjct: 566 WGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRD 625

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            G++K PG SW+E+ NKIH+F   D SH E + IY  L E+  K+ RE GYV+ T+ VLH
Sbjct: 626 IGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKM-REEGYVSLTKLVLH 684

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +VEEEEK  ML  HSE+LA+A+G+L    G  IR+ KNLRVC DCHS  K +S++ GR +
Sbjct: 685 DVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLI 744

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           ++RD++RFHHF  G CSCGDYW
Sbjct: 745 ILRDSHRFHHFNEGFCSCGDYW 766



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 249/518 (48%), Gaps = 56/518 (10%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F  N ++  Y +      AR+LFD M EK DVV WNS++S Y+ +G   EA  +F  M  
Sbjct: 112 FSWNVMLTGYVRNCRLGDARRLFDLMPEK-DVVSWNSLLSGYAQNGYVDEAREVFDNMPE 170

Query: 154 ----------VGLVTNAYTFVAALQACEDSSFETLGME-IHAATVKSGQ---------NL 193
                        V N     A L     S ++ +    +    V+  +          +
Sbjct: 171 KNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM 230

Query: 194 QVYVA---NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            V  A   N +I+ YA+ G +++A  +  +   +D  +W +M++G+VQN +  +A  FF 
Sbjct: 231 PVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFD 290

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS----DLQIGNTLMDMY 306
           E+      P++    N VS +  +   +  K++     ++ F S    ++   NT++  Y
Sbjct: 291 EM------PEK----NEVSYNAMIAGYVQTKKMD--IARELFESMPCRNISSWNTMITGY 338

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
            +   +    + F  M  +D +SW  IIAGYAQ+  + +AL +F  ++ +G   +    G
Sbjct: 339 GQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFG 398

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
             L  C+ +  +   K+IHG  ++ G  +   + NA++ +Y KCG+ID + + FE IE K
Sbjct: 399 CALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEK 458

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           DVVSW +M++ Y  +G   +AL +F  M  A V+ D IT+V  LSA S   +L +G E  
Sbjct: 459 DVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYF 518

Query: 486 GFIIRKGFNLEGSVASS-----LVDMYARCGALDIANKVF-NCVQTKDLILWTSMINANG 539
            + + K +   G + +S     ++D+  R G L+ A  +  N         W +++ A+ 
Sbjct: 519 -YSMTKDY---GVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASR 574

Query: 540 LHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +HG    G+ A ++ +KME ++        L+ LYA S
Sbjct: 575 IHGNTELGEKAAEMVFKMEPQNSG--MYVLLSNLYAAS 610



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 183/386 (47%), Gaps = 32/386 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +  A +LFD+   R VFTW AM+  YV NG        +  M       +  ++
Sbjct: 245 YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSY 300

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             +I      K +D   ++    + C   S+    N+++  Y +  D  +AR+ FD M +
Sbjct: 301 NAMIAGYVQTKKMDIARELFE-SMPCRNISS---WNTMITGYGQIGDIAQARKFFDMMPQ 356

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D V W +II+ Y+ SG   EAL +F E+++ G   N  TF  AL  C D +   LG +
Sbjct: 357 R-DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQ 415

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   VK G     +V NAL+AMY +CG + EA      +E KD VSWN+ML G+ ++  
Sbjct: 416 IHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGF 475

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F  ++ AG KPD++  V  +SA    G L  G E + Y++ + +         
Sbjct: 476 GRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTE-YFYSMTKDY-------GV 527

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFI----------SWTTII-AGYAQNNCHL--KALE 348
           +       C ++ +GR      AQD I          SW  ++ A     N  L  KA E
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE 587

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSG 374
           +    ++E  ++ + ++ S L A SG
Sbjct: 588 M--VFKMEPQNSGMYVLLSNLYAASG 611



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 11/279 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YG+ G +  A + FD + QR   +W A++  Y  +G     L  +  ++  G S++  TF
Sbjct: 338 YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATF 397

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
            C +  CA +  L+ G +IHG  +K GY +  F+ N+L+AMY KC    +A   F+ + E
Sbjct: 398 GCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEE 457

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DVV WN++++ Y+  G   +AL +F  M+  G+  +  T V  L AC  +     G E
Sbjct: 458 K-DVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTE 516

Query: 182 -IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT----- 234
             ++ T   G          +I +  R G++ EA  ++  +     + SW ++L      
Sbjct: 517 YFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIH 576

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           G  +       M F  E Q +G     V   N  +ASGR
Sbjct: 577 GNTELGEKAAEMVFKMEPQNSGM---YVLLSNLYAASGR 612



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 175/410 (42%), Gaps = 71/410 (17%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N  I+ + R G    A  V   +  + SVS+N+M++G+++N  +  A   F       Q 
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF------DQM 106

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P++                                 DL   N ++  Y + C +    R+
Sbjct: 107 PER---------------------------------DLFSWNVMLTGYVRNCRLGDARRL 133

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELF------RTVQLEGLDADVMIIGSVLMAC 372
           F  M  +D +SW ++++GYAQN    +A E+F       ++   GL A  +  G +  AC
Sbjct: 134 FDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEAC 193

Query: 373 ------SGLKCMSQTKEIHGYIIRKGLSDLVIL------------NAIVDVYGKCGNIDY 414
                 S    +S    + G++ +K L D   L            N ++  Y + G +  
Sbjct: 194 LLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQ 253

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R +F+   ++DV +WT+M+S YV NG+ +EA   F  M E N E     +++       
Sbjct: 254 ARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN-EVSYNAMIAGYVQTKK 312

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           + I    +EL  F      N+  S  ++++  Y + G +  A K F+ +  +D + W ++
Sbjct: 313 MDI---AREL--FESMPCRNI--SSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAI 365

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           I      G  + A+++F +++ +  + +  TF   L  C+    +  GK+
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQ 415



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 1/141 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A   F+ + ++ V +WN ML  Y  +G   + L  +  M+  G+  D  T
Sbjct: 438 MYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEIT 497

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    LD G +  + +    G   T      ++ +  +     +A+ L   M
Sbjct: 498 MVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNM 557

Query: 120 GEKEDVVLWNSIISAYSASGQ 140
             +     W +++ A    G 
Sbjct: 558 PFQPGAASWGALLGASRIHGN 578



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 18/163 (11%)

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
            D++  N  +  + + G+ D + +VF ++  +  VS+ +MIS Y+ N   N A  LF  M
Sbjct: 47  PDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM 106

Query: 454 NEANVESDSITLVS-----ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
            E ++ S ++ L        L  A  L  L   K++  +             +SL+  YA
Sbjct: 107 PERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSW-------------NSLLSGYA 153

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           + G +D A +VF+ +  K+ I W  ++ A   +GR + A  LF
Sbjct: 154 QNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF 196



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 39/224 (17%)

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           + N    ++  D++ W   IS+++ NG  + AL +F          +++   S++S  + 
Sbjct: 37  TNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVF----------NTMPRRSSVSYNAM 86

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDM-----------YARCGALDIANKVFNCV 523
           +S         G++    FNL  ++   + +            Y R   L  A ++F+ +
Sbjct: 87  IS---------GYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLM 137

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
             KD++ W S+++    +G    A ++F  M  +    + I++  LL A  H+G I E  
Sbjct: 138 PEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEAC 193

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
              E  + D+ L  W     CL+    R   L +A      M +
Sbjct: 194 LLFE-SKSDWDLISW----NCLMGGFVRKKKLGDARWLFDKMPV 232


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/761 (33%), Positives = 424/761 (55%), Gaps = 24/761 (3%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAFTFPCV 64
           G    A  LFD + + T   WN ++  ++ N  P+  L  Y+RMR       D++TF   
Sbjct: 51  GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC----------YDFRK--- 111
           +KACA  + L  G  +H  VL+  + S+  + NSL+ MY+ C          YDF     
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
            R++FD M  K +VV WN++IS Y  + + +EA  +FR M R+G+     +FV    A  
Sbjct: 171 VRRVFDTM-RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVW 229

Query: 172 DSSFETLGMEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
             S       ++   VK G +     +V ++ I MYA  G +  A  +      +++  W
Sbjct: 230 RMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVW 289

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           N+M+ G+VQN+   +A+  F ++  + Q   D V  ++A++A  +L  L  G++LHAY +
Sbjct: 290 NTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYIL 349

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K   +  + I N ++ MY++C  +    +VF  M  +D ++W T+++ + QN    + L 
Sbjct: 350 KSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLM 409

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGK 408
           L   +Q +G   D + + ++L   S L+     K+ H Y+IR G+    + + ++D+Y K
Sbjct: 410 LVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSYLIDMYAK 469

Query: 409 CGNIDYSRNVFE--SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            G I  ++ +FE  S   +D  +W +MI+ Y  NGL+ E   +F  M E NV  +++TL 
Sbjct: 470 SGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLA 529

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           S L A + +  +  GK+++GF IR   N    V ++L+DMY++ GA+  A  VF     K
Sbjct: 530 SILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEK 589

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           + + +T+MI++ G HG G+ A+ LF+ M      PD +TF+A+L ACS++GL++EG +  
Sbjct: 590 NSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIF 649

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE-PTAEVWCALLGACRVHS 645
           + M  +Y++ P  EHY C+ D+LGR   + EAY+FV+ +  E  T  +W +LLGACR+H 
Sbjct: 650 QSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHG 709

Query: 646 NKELGEIVAKKLLELDPGN--PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
             ELG++VA KLLE++ G+   G +VL+SN++AA   W +V++VR  MR  GL K  G S
Sbjct: 710 EFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCS 769

Query: 704 WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
           W+E+   ++ F++RD  H +  EIY+ L ++  ++ ++ GY
Sbjct: 770 WVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEM-KDAGY 809



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 197/376 (52%), Gaps = 5/376 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAF 59
           MY + G V  A ++FD   +R    WN M+G YV N  P+  ++ + + M      +D  
Sbjct: 264 MYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDV 323

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF   + A + L+ L+ G ++H  +LK        I+N+++ MY++C     + ++F  M
Sbjct: 324 TFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNM 383

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E+ DVV WN+++SA+  +G   E L L   MQ+ G + ++ T  A L    +   + +G
Sbjct: 384 LER-DVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIG 442

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNSMLTGFV 237
            + HA  ++ G   +  + + LI MYA+ G +T A  +  +    ++D  +WN+M+ G+ 
Sbjct: 443 KQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYT 501

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN L  +    FR++     +P+ V   + + A   +G +  GK++H +AI+     ++ 
Sbjct: 502 QNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVF 561

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +G  L+DMY+K   + Y   VF +   ++ +++TT+I+ Y Q+    +AL LF  +   G
Sbjct: 562 VGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSG 621

Query: 358 LDADVMIIGSVLMACS 373
           +  D +   ++L ACS
Sbjct: 622 IKPDSVTFVAILSACS 637



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 238/476 (50%), Gaps = 29/476 (6%)

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA-GQKPDQVCTV 265
           R G   +A  +   +    +V WN+++ GF+ N++   A+ F+  ++ +   K D     
Sbjct: 49  RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC-VNYMG-------- 316
           + + A  +  +L  GK LH + ++  F S   + N+L++MY+ C   V Y+G        
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC 168

Query: 317 ----RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
               RVF  M  ++ ++W T+I+ Y +    ++A ++FRT+   G+    +   +V  A 
Sbjct: 169 DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAV 228

Query: 373 SGLKCMSQTKEIHGYIIRKG---LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
             +        ++G +++ G   + D  ++++ + +Y + G +D++R +F+    ++   
Sbjct: 229 WRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV 288

Query: 430 WTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           W +MI  YV N    EA++LF  +M       D +T +SAL+A S L  L+ G++L+ +I
Sbjct: 289 WNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYI 348

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---NGLHGRGK 545
           ++    L+  + ++++ MY+RCG++  + KVF+ +  +D++ W +M++A   NGL   G 
Sbjct: 349 LKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEG- 407

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK-FLEIMRCDYQLDPWPEHYAC 604
             + L + M+ + F  D +T  ALL   S+      GK+    ++R   Q +    +   
Sbjct: 408 --LMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSY--- 462

Query: 605 LVDLLGRANHLEEAYQ-FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           L+D+  ++  +  A Q F ++   +     W A++     +   E G  V +K++E
Sbjct: 463 LIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIE 518



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 167/331 (50%), Gaps = 14/331 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGS+  + ++F  + +R V TWN M+ A+V NG     L     M+  G  VD+ T
Sbjct: 366 MYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVT 425

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++   + L+  + G + H  +++ G  ++  D   + L+ MYAK      A+QLF++
Sbjct: 426 LTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD---SYLIDMYAKSGLITTAQQLFEK 482

Query: 119 MGEKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
             + + D   WN++I+ Y+ +G   E   +FR+M    +  NA T  + L AC       
Sbjct: 483 NSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIG 542

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LG +IH   ++   N  V+V  AL+ MY++ G +T A  V  +   K+SV++ +M++ + 
Sbjct: 543 LGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYG 602

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q+ +  +A+  F  + G+G KPD V  V  +SA    G +  G       I Q    + +
Sbjct: 603 QHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLR-----IFQSMEREYK 657

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           I  +  + Y  CC  + +GRV   + A +F+
Sbjct: 658 IQPS-AEHY--CCVADMLGRVGRVVEAYEFV 685


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/623 (38%), Positives = 367/623 (58%), Gaps = 9/623 (1%)

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  + + L+N     +NS++     +    +A+  +  +  +G KPD +     + A   
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
                 G  +H + +K GF  D  I ++L+ +YA    +    ++F   +A+D +SW  +
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267

Query: 334 IAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           I GY ++     A  +F R V  + +  + MI G  ++       + + K +   +  + 
Sbjct: 268 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGK-----IDEAKRLFDEMPER- 321

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
             +LV  N+++  + KCGN++ +  +F  +  +DVVSW SM++ Y   G  NEAL LF  
Sbjct: 322 --NLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQ 379

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M    V+    T+VS LSA + L  L KG  L+ +I      +   V ++LVDMYA+CG 
Sbjct: 380 MRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGK 439

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           + +A +VFN +++KD++ W ++I    +HG  K A  LF +M+     P+ ITF+A+L A
Sbjct: 440 ISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSA 499

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CSH+G+++EG+K L+ M   Y ++P  EHY C++DLL RA  LEEA + + +M +EP   
Sbjct: 500 CSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPS 559

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
              ALLG CR+H N ELGE+V K+L+ L P + G Y+L+SN++AA++KW D  +VR  M+
Sbjct: 560 ALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMK 619

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
            +G+ K PG S IE+   +H F+A D SH ES++IY+KL EI  +L+   GY A T  VL
Sbjct: 620 VNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVL 679

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
            ++EEE+K   L  HSE+LAIAYG+L       IRI KNLRVC DCH   KL+S+++GRE
Sbjct: 680 LDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGRE 739

Query: 813 LVVRDANRFHHFEAGVCSCGDYW 835
           ++VRD NRFHHFE G CSC D+W
Sbjct: 740 IIVRDRNRFHHFEDGECSCLDFW 762



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 190/389 (48%), Gaps = 29/389 (7%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A+ +F  +       +N+++ A  S+  PL  L  Y  M   G+  D  T+P VIKAC  
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
                 G  +H  V+K G++   +IV+SL+ +YA   D   A+QLF+ +    DVV WN+
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFN-LCSARDVVSWNA 266

Query: 131 IISAYSASGQCLEALGLF-----REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           +I  Y    +   A  +F     R++     + N Y  V  +   +   F+ +       
Sbjct: 267 MIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAK-RLFDEM------- 318

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
                +NL  +  N+++A + +CG + +A G+  ++  +D VSWNSML  + Q     +A
Sbjct: 319 ---PERNLVSW--NSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEA 373

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           +  F +++  G KP +   V+ +SA   LG L  G  LH Y        +  +G  L+DM
Sbjct: 374 LALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDM 433

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
           YAKC  ++   +VF  M ++D ++W TIIAG A +    +A +LF+ ++  G++ + +  
Sbjct: 434 YAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITF 493

Query: 366 GSVLMACSG----------LKCMSQTKEI 384
            ++L ACS           L CMS +  I
Sbjct: 494 VAILSACSHAGMVDEGQKLLDCMSSSYGI 522



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 2/212 (0%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           KCG+V DA  LF ++  R V +WN+ML  Y   G+P   L  + +MR +G+     T   
Sbjct: 335 KCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVS 394

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++ ACA L  LD G  +H  +     +    +  +LV MYAKC     A Q+F+ M E +
Sbjct: 395 LLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAM-ESK 453

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           DV+ WN+II+  +  G   EA  LF+EM+  G+  N  TFVA L AC  +     G ++ 
Sbjct: 454 DVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLL 513

Query: 184 AATVKS-GQNLQVYVANALIAMYARCGKMTEA 214
                S G   +V     +I + AR G + EA
Sbjct: 514 DCMSSSYGIEPKVEHYGCVIDLLARAGFLEEA 545



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 35/258 (13%)

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           Y++ +F  +++     + S+I +   +    EAL L++ M ++ ++ D +T    + A +
Sbjct: 147 YAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACN 206

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
             S+   G  ++  +++ GF  +  + SSL+ +YA    L  A ++FN    +D++ W +
Sbjct: 207 ESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNA 266

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM---- 589
           MI+    H     A  +F +M       D I++  ++   +  G I+E K+  + M    
Sbjct: 267 MIDGYVKHVEMGHARMVFDRMVCR----DVISWNTMINGYAIVGKIDEAKRLFDEMPERN 322

Query: 590 ------------RCDYQLD--------------PWPEHYACLVDLLGRANHLEEAYQFVR 623
                       +C    D               W    AC     G+ N     +  +R
Sbjct: 323 LVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQ-CGKPNEALALFDQMR 381

Query: 624 SMQIEPTAEVWCALLGAC 641
           ++ ++PT     +LL AC
Sbjct: 382 AVGVKPTEATVVSLLSAC 399



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 39/80 (48%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A Q+F+ +  + V  WN ++     +G      + +  M+  G+  +  T
Sbjct: 433 MYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDIT 492

Query: 61  FPCVIKACAMLKDLDCGAKI 80
           F  ++ AC+    +D G K+
Sbjct: 493 FVAILSACSHAGMVDEGQKL 512


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/638 (35%), Positives = 369/638 (57%), Gaps = 36/638 (5%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           NAL++ YA+ G +        ++  +DSVS+N+ + GF  N    ++++ F+ +Q  G +
Sbjct: 93  NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P +   V+ ++AS +L +L  GK++H   I + F+ ++ I N L DMYAKC  +     +
Sbjct: 153 PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F  +T ++ +SW  +I+GYA+N    K + L   ++L G                     
Sbjct: 213 FDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSG--------------------- 251

Query: 379 SQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
                         + D V ++ I+  Y +CG +D +R VF   + KD+V WT+M+  Y 
Sbjct: 252 -------------HMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYA 298

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NG   +AL LF  M   ++E DS TL S +S+ + L+ L  G+ ++G  I  G N    
Sbjct: 299 KNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLL 358

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           V+S+L+DMY++CG +D A  VFN + T++++ W +MI     +G  K A++LF  M  + 
Sbjct: 359 VSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQK 418

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
           F PD++TF+ +L AC H   I +G+++ + +   + + P  +HYAC+V+LLGR   +E+A
Sbjct: 419 FKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQA 478

Query: 619 YQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
              +++M  +P   +W  LL  C    +    E+ A+ L ELDP     Y+++SN++A+ 
Sbjct: 479 VALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASM 538

Query: 679 RKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKL 738
            +WKDV  VR  M+   +KK  G SWIEI N++H F + D++H ES++IY+KL  +  KL
Sbjct: 539 GRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKL 598

Query: 739 EREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG-SLIRITKNLRVCVD 797
           + E G+   T  VLH+V E+EK + +  HSE+LA+A+G++K   G S IRI KN+R+C D
Sbjct: 599 QEE-GFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICND 657

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CH F K  SR+ GR++++RD+NRFHHF  G CSC D W
Sbjct: 658 CHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 230/483 (47%), Gaps = 71/483 (14%)

Query: 89  YDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQC------ 141
           +  TD F+ N L+ +YAK    R A+ LFD+M  K D   WN+++SAY+ SG        
Sbjct: 53  FQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM-LKRDXFSWNALLSAYAKSGSIQNLKAT 111

Query: 142 -------------------------LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
                                     E+L LF+ MQR G     YT V+ L A       
Sbjct: 112 FDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDL 171

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G +IH + +       V++ NAL  MYA+CG++ +A  +   L  K+ VSWN M++G+
Sbjct: 172 RYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGY 231

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            +N    K +    +++ +G  PDQV     ++A                          
Sbjct: 232 AKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA-------------------------- 265

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
                    Y +C  V+   RVF +   +D + WT ++ GYA+N     AL LF  + LE
Sbjct: 266 ---------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE 316

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
            ++ D   + SV+ +C+ L  +   + +HG  I  GL ++L++ +A++D+Y KCG ID +
Sbjct: 317 HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDA 376

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           R+VF  + +++VVSW +MI     NG   +ALELF  M +   + D++T +  LSA    
Sbjct: 377 RSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436

Query: 476 SILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTS 533
           + +++G+E  +    + G        + +V++  R G ++ A  +  N     D ++W++
Sbjct: 437 NWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWST 496

Query: 534 MIN 536
           +++
Sbjct: 497 LLS 499



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 220/469 (46%), Gaps = 70/469 (14%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE---------------------- 38
           +Y K G + DA+ LFDK+ +R  F+WNA+L AY  +G                       
Sbjct: 67  LYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTT 126

Query: 39  ---------PLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                    P   LE + RM+  G     +T   ++ A A L DL  G +IHG ++   +
Sbjct: 127 IAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNF 186

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
               FI N+L  MYAKC +  +AR LFD +  K+++V WN +IS Y+ +GQ  + +GL  
Sbjct: 187 LGNVFIWNALTDMYAKCGEIEQARWLFDCL-TKKNLVSWNLMISGYAKNGQPEKCIGLLH 245

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           +M+  G + +  T                                    + +IA Y +CG
Sbjct: 246 QMRLSGHMPDQVTM-----------------------------------STIIAAYCQCG 270

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
           ++ EA  V  + + KD V W +M+ G+ +N     A+  F E+     +PD     + VS
Sbjct: 271 RVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVS 330

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           +  +L +L +G+ +H  +I  G  ++L + + L+DMY+KC  ++    VF  M  ++ +S
Sbjct: 331 SCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVS 390

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W  +I G AQN     ALELF  +  +    D +    +L AC     + Q +E    I 
Sbjct: 391 WNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSIS 450

Query: 390 RK-GLSDLVILNA-IVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMIS 435
            + G++  +   A +V++ G+ G I+ +  + +++    D + W++++S
Sbjct: 451 NQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/738 (35%), Positives = 390/738 (52%), Gaps = 57/738 (7%)

Query: 100 VAMYAKCYDFRKARQLFDRMG-EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
           +A YA+      AR++FD        V  WN++++AY  + Q  EAL LF +M +   V+
Sbjct: 29  IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVS 88

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGV 217
                   ++          GM   A  V  +  +  V    +++  Y R G + EA  +
Sbjct: 89  WNGLISGHIKN---------GMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERL 139

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
            + + +K+ VSW  ML G +Q      A + F  +     + D V   N +      G L
Sbjct: 140 FWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMP----EKDVVAVTNMIGGYCEEGRL 195

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
              + L     K+  V+       ++  YA+   V+   ++F  M  ++ +SWT ++ GY
Sbjct: 196 DEARALFDEMPKRNVVT----WTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGY 251

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV 397
             +    +A  LF          D M +  V                            V
Sbjct: 252 THSGRMREASSLF----------DAMPVKPV----------------------------V 273

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           + N ++  +G  G +D +R VF+ ++ +D  +W++MI  Y   G   EAL LF  M    
Sbjct: 274 VCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREG 333

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           +  +  +L+S LS   SL+ L  GK+++  ++R  F+ +  VAS L+ MY +CG L  A 
Sbjct: 334 LALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAK 393

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           +VFN    KD+++W SMI     HG G+ A+++F+ M +    PD +TF+ +L ACS+SG
Sbjct: 394 QVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSG 453

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
            + EG +  E M+C YQ++P  EHYACLVDLLGRA+ + EA + V  M +EP A VW AL
Sbjct: 454 KVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGAL 513

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           LGACR H   +L E+  +KL +L+P N G YVL+SN++A   +W+DVE +R +++   + 
Sbjct: 514 LGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVT 573

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K PG SWIE+  K+H F   D        I  K+ E    L RE GY     FVLH+V+E
Sbjct: 574 KLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDE 633

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           EEK   L  HSE+LA+AYG+LK  EG  IR+ KNLRVC DCHS  KL++++ GRE+++RD
Sbjct: 634 EEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRD 693

Query: 818 ANRFHHFEAGVCSCGDYW 835
           ANRFHHF+ G CSC DYW
Sbjct: 694 ANRFHHFKDGHCSCKDYW 711



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 184/391 (47%), Gaps = 42/391 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLRVLETYSRMR 50
           Y + G + +A  LFD++ +R V TW AM+  Y  NG+           P R   +++ M 
Sbjct: 189 YCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAM- 247

Query: 51  VLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR 110
           +LG     +T    ++  + L D      +  +V          + N ++  +    +  
Sbjct: 248 LLG-----YTHSGRMREASSLFD---AMPVKPVV----------VCNEMIMGFGLNGEVD 289

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
           KAR++F  M E+++   W+++I  Y   G  LEALGLFR MQR GL  N  + ++ L  C
Sbjct: 290 KARRVFKGMKERDNGT-WSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVC 348

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
              +    G ++HA  V+S  +  +YVA+ LI MY +CG +  A  V  +   KD V WN
Sbjct: 349 VSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWN 408

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH-----A 285
           SM+TG+ Q+ L  +A+  F ++  +G  PD V  +  +SA    G +  G EL       
Sbjct: 409 SMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCK 468

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCH 343
           Y ++ G    ++    L+D+  +   VN   ++  +M  + D I W  ++ A        
Sbjct: 469 YQVEPG----IEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLD 524

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSG 374
           L  + + +  QLE  +A   ++ S + A  G
Sbjct: 525 LAEVAVEKLAQLEPKNAGPYVLLSNMYAYKG 555



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 206/466 (44%), Gaps = 35/466 (7%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           K G + +A ++FD +  R V +W +M+  YV NG+       +  M       +  ++  
Sbjct: 98  KNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMP----HKNVVSWTV 153

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI-VNSLVAMYAKCYDFRKARQLFDRMGEK 122
           ++        +D   K+  ++        D + V +++  Y +     +AR LFD M  K
Sbjct: 154 MLGGLLQEGRVDDARKLFDMM-----PEKDVVAVTNMIGGYCEEGRLDEARALFDEM-PK 207

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            +VV W +++S Y+ +G+   A  LF  M     V+     +    +       +L    
Sbjct: 208 RNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSL---F 264

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
            A  VK      V V N +I  +   G++ +A  V   ++ +D+ +W++M+  + +    
Sbjct: 265 DAMPVKP-----VVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYE 319

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A+  FR +Q  G   +    ++ +S    L +L +GK++HA  ++  F  DL + + L
Sbjct: 320 LEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVL 379

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           + MY KC  +    +VF +   +D + W ++I GY+Q+    +AL +F  +   G+  D 
Sbjct: 380 ITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDD 439

Query: 363 MIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYS 415
           +    VL ACS       GL+     K    Y +  G+     L   VD+ G+   ++ +
Sbjct: 440 VTFIGVLSACSYSGKVKEGLELFETMK--CKYQVEPGIEHYACL---VDLLGRADQVNEA 494

Query: 416 RNVFESIE-SKDVVSWTSMIS---SYVHNGLANEALELFYLMNEAN 457
             + E +    D + W +++    +++   LA  A+E    +   N
Sbjct: 495 MKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKN 540



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 3/136 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG+++ A+Q+F++   + V  WN+M+  Y  +G     L  +  M   G+  D  T
Sbjct: 382 MYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVT 441

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN--SLVAMYAKCYDFRKARQLFDR 118
           F  V+ AC+    +  G ++    +KC Y     I +   LV +  +     +A +L ++
Sbjct: 442 FIGVLSACSYSGKVKEGLELFE-TMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEK 500

Query: 119 MGEKEDVVLWNSIISA 134
           M  + D ++W +++ A
Sbjct: 501 MPMEPDAIVWGALLGA 516


>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/749 (34%), Positives = 415/749 (55%), Gaps = 40/749 (5%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KC     A +LF ++  R VF+W A++G     G     L  +  M+  G+  D F  
Sbjct: 126 YAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVL 185

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+KAC  L+ +  G  +HG VLK G+ +  F+ +SLV MY KC     AR++FD M E
Sbjct: 186 PNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVE 245

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K +VV WNS+I  Y  +G   EA+ +F +M+  G+     T  + L A  +      G +
Sbjct: 246 K-NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQ 304

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            HA  + +  +L   + +++I  Y++ G + +A  V  ++  KD V+WN +++ +VQ+  
Sbjct: 305 GHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQ 364

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA+     ++    + D V   + +SAS    N+  GKE H Y I++   SD+ + N+
Sbjct: 365 VGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANS 424

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++DMYAKC  ++   +VF   T +D + W T++A YAQ     +AL+LF  +Q + +  +
Sbjct: 425 IIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPN 484

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES 421
           V+   SV++               G++                   + G ++ ++++F  
Sbjct: 485 VISWNSVIL---------------GFL-------------------RNGQVNEAKDMFSQ 510

Query: 422 IES----KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           ++S     ++++WT++IS    +G   EA+  F  M EA +     ++ S L A + +  
Sbjct: 511 MQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPS 570

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L  G+ ++GFI R  F L   VA+SLVDMYA+CG++D A KVF+ + +K+L ++ +MI+A
Sbjct: 571 LWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISA 630

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
             LHG+   A+ LF  ++ E   PD ITF ++L ACSH+GL+NEG      M   + ++P
Sbjct: 631 YALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNP 690

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHY C+V LL R  +L+EA + + +M  +P A +  +LL ACR H   ELGE ++K L
Sbjct: 691 IMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHL 750

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
            +L+P N GNYV +SN +AA+ +W +V  +R  M+  GL+K PG SWI+ G K++ F+A 
Sbjct: 751 FKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAG 810

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVA 746
           D SH +++EIY  LA +  ++ R  GYV 
Sbjct: 811 DGSHPKTEEIYAMLAMLLSEM-RFMGYVP 838



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 162/518 (31%), Positives = 262/518 (50%), Gaps = 34/518 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + DA ++FD + ++ V TWN+M+  YV NG     ++ +  MRV GI     T
Sbjct: 226 MYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVT 285

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + A A L  L  G + H + +    D  + + +S++  Y+K      A  +F RM 
Sbjct: 286 VASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRML 345

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK DVV WN +IS+Y    Q  +AL +   M+   L  ++ T  + L A   +S   LG 
Sbjct: 346 EK-DVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGK 404

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E H   ++      V VAN++I MYA+C ++ +A  V      +D V WN++L  + Q  
Sbjct: 405 EGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVG 464

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A++ F ++Q     P+ V + N+V     LG L NG+                  N
Sbjct: 465 LSGEALKLFYQMQFDSVPPN-VISWNSVI----LGFLRNGQV-----------------N 502

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
              DM+++   + +           + I+WTT+I+G AQ+    +A+  F+ +Q  G+  
Sbjct: 503 EAKDMFSQMQSLGFQ---------PNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRP 553

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
            +  I SVL+AC+ +  +   + IHG+I R      + +  ++VD+Y KCG+ID ++ VF
Sbjct: 554 SIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVF 613

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             + SK++  + +MIS+Y  +G A EAL LF  + +  +E DSIT  S LSA S   ++ 
Sbjct: 614 HMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVN 673

Query: 480 KGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIA 516
           +G  L   ++ K   N        +V + +RCG LD A
Sbjct: 674 EGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEA 711



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 154/516 (29%), Positives = 265/516 (51%), Gaps = 7/516 (1%)

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           IS+    G   E++ L  EM+          +   LQ C        G +IHA  +K+G 
Sbjct: 51  ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 110

Query: 192 NL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
                 YV   L+  YA+C     A  + ++L  ++  SW +++    +      A+  F
Sbjct: 111 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGF 170

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            E+Q  G  PD     N + A G L  +  GK +H Y +K GF + + + ++L+DMY KC
Sbjct: 171 IEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKC 230

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             +    +VF  M  ++ ++W ++I GY QN  + +A+++F  +++EG++   + + S L
Sbjct: 231 GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFL 290

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            A + L  + + K+ H   I   L  D ++ ++I++ Y K G I+ +  VF  +  KDVV
Sbjct: 291 SASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVV 350

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           +W  +ISSYV +    +AL + +LM   N+  DS+TL S LSA++  S +K GKE + + 
Sbjct: 351 TWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYC 410

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           IR+    +  VA+S++DMYA+C  +D A KVF+    +DL+LW +++ A    G    A+
Sbjct: 411 IRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEAL 470

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
            LFY+M+ +S  P+ I++ +++     +G +NE K     M+      P    +  L+  
Sbjct: 471 KLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQ-SLGFQPNLITWTTLISG 529

Query: 609 LGRANHLEEAYQFVRSMQ---IEPTAEVWCALLGAC 641
           L ++    EA  F + MQ   I P+     ++L AC
Sbjct: 530 LAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLAC 565



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 171/587 (29%), Positives = 294/587 (50%), Gaps = 43/587 (7%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRK-ARQLFDRMG 120
           +++ C   + L  G +IH  +LK G  +   +++   LV  YAKC DF + A +LF R+ 
Sbjct: 85  LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKC-DFPEVAVRLFHRLR 143

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + +V  W +I+      G   +AL  F EMQ  G+  + +     L+AC       LG 
Sbjct: 144 VR-NVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGK 202

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   +K G    V+V+++L+ MY +CG + +A  V   +  K+ V+WNSM+ G+VQN 
Sbjct: 203 GVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNG 262

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A+  F +++  G +P +V   + +SAS  L  L+ GK+ HA AI      D  +G+
Sbjct: 263 LNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGS 322

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           ++++ Y+K   +     VF +M  +D ++W  +I+ Y Q++   KAL +   ++ E L  
Sbjct: 323 SIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRF 382

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D + + S+L A +    +   KE H Y IR+ L SD+V+ N+I+D+Y KC  ID +R VF
Sbjct: 383 DSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVF 442

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           +S   +D+V W +++++Y   GL+ EAL+LFY M   +V  + I+  S +     L  L+
Sbjct: 443 DSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI-----LGFLR 497

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G+                  +   DM+++  +L             +LI WT++I+   
Sbjct: 498 NGQ-----------------VNEAKDMFSQMQSLGF---------QPNLITWTTLISGLA 531

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLD-P 597
             G G  AI  F KM+     P   +  ++L AC+    +  G+     I R ++ L  P
Sbjct: 532 QSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVP 591

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
                  LVD+  +   ++EA + V  M       ++ A++ A  +H
Sbjct: 592 VA---TSLVDMYAKCGSIDEAKK-VFHMMSSKELPIYNAMISAYALH 634



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A+++F  +S + +  +NAM+ AY  +G+ +  L  +  ++  GI  D+ T
Sbjct: 599 MYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSIT 658

Query: 61  FPCVIKACAMLKDLDCGAKIHG-LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC+    ++ G  +   +V K   +        +V++ ++C +  +A +L   M
Sbjct: 659 FTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTM 718

Query: 120 GEKEDVVLWNSIISA 134
             + D  +  S+++A
Sbjct: 719 PFQPDAHILGSLLTA 733


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/742 (34%), Positives = 407/742 (54%), Gaps = 62/742 (8%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N++++ Y +   F  AR LFD+M E+ D+  WN +++ Y  + +  +A  LF  M    +
Sbjct: 84  NAMISGYLRNSKFNLARNLFDQMPER-DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDV 142

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           V+                                        N+L++ YA+ G + EA  
Sbjct: 143 VS---------------------------------------WNSLLSGYAQNGYVDEARE 163

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V   +  K+S+SWN +L  +V N    +A   F        K D     + +S +  +G 
Sbjct: 164 VFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE------SKSDW----DLISWNCLMGG 213

Query: 277 LLNGKEL--HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
            +  K+L    +   +  V D    NT++  YA+   ++   R+F +   +D  +WT ++
Sbjct: 214 FVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMV 273

Query: 335 AGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           +GY QN    +A   F  +  +  +  + MI G V       K M   +E+   +  + +
Sbjct: 274 SGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQT-----KKMDIARELFESMPCRNI 328

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
           S     N ++  YG+ G+I  +R  F+ +  +D VSW ++I+ Y  +G   EAL +F  +
Sbjct: 329 SSW---NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
            +     +  T   ALS  + ++ L+ GK+++G  ++ G+     V ++L+ MY +CG++
Sbjct: 386 KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSI 445

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
           D AN  F  ++ KD++ W +M+     HG G+ A+ +F  M+     PD IT + +L AC
Sbjct: 446 DEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           SH+GL++ G ++   M  DY + P  +HY C++DLLGRA  LEEA   +R+M  +P A  
Sbjct: 506 SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAAS 565

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
           W ALLGA R+H N ELGE  A+ + +++P N G YVL+SN++AAS +W D +++R +MR 
Sbjct: 566 WGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRD 625

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            G++K PG SW+E+ NKIH+F   D SH E + IY  L E+  K+ RE GYV+ T+ VLH
Sbjct: 626 IGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKM-REEGYVSLTKLVLH 684

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +VEEEEK  ML  HSE+LA+A+G+L    G  IR+ KNLRVC DCHS  K +S++ GR +
Sbjct: 685 DVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLI 744

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           ++RD++RFHHF  G CSCGDYW
Sbjct: 745 ILRDSHRFHHFNEGFCSCGDYW 766



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 249/518 (48%), Gaps = 56/518 (10%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F  N ++  Y +      AR+LFD M EK DVV WNS++S Y+ +G   EA  +F  M  
Sbjct: 112 FSWNVMLTGYVRNCRLGDARRLFDLMPEK-DVVSWNSLLSGYAQNGYVDEAREVFDNMPE 170

Query: 154 ----------VGLVTNAYTFVAALQACEDSSFETLGME-IHAATVKSGQ---------NL 193
                        V N     A L     S ++ +    +    V+  +          +
Sbjct: 171 KNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM 230

Query: 194 QVYVA---NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            V  A   N +I+ YA+ G +++A  +  +   +D  +W +M++G+VQN +  +A  FF 
Sbjct: 231 PVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFD 290

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS----DLQIGNTLMDMY 306
           E+      P++    N VS +  +   +  K++     ++ F S    ++   NT++  Y
Sbjct: 291 EM------PEK----NEVSYNAMIAGYVQTKKMD--IARELFESMPCRNISSWNTMITGY 338

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
            +   +    + F  M  +D +SW  IIAGYAQ+  + +AL +F  ++ +G   +    G
Sbjct: 339 GQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFG 398

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
             L  C+ +  +   K+IHG  ++ G  +   + NA++ +Y KCG+ID + + FE IE K
Sbjct: 399 CALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEK 458

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           DVVSW +M++ Y  +G   +AL +F  M  A V+ D IT+V  LSA S   +L +G E  
Sbjct: 459 DVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYF 518

Query: 486 GFIIRKGFNLEGSVASS-----LVDMYARCGALDIANKVF-NCVQTKDLILWTSMINANG 539
            + + K +   G + +S     ++D+  R G L+ A  +  N         W +++ A+ 
Sbjct: 519 -YSMTKDY---GVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASR 574

Query: 540 LHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +HG    G+ A ++ +KME ++        L+ LYA S
Sbjct: 575 IHGNTELGEKAAEMVFKMEPQNSG--MYVLLSNLYAAS 610



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 183/386 (47%), Gaps = 32/386 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +  A +LFD+   R VFTW AM+  YV NG        +  M       +  ++
Sbjct: 245 YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSY 300

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             +I      K +D   ++    + C   S+    N+++  Y +  D  +AR+ FD M +
Sbjct: 301 NAMIAGYVQTKKMDIARELFE-SMPCRNISS---WNTMITGYGQIGDIAQARKFFDMMPQ 356

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D V W +II+ Y+ SG   EAL +F E+++ G   N  TF  AL  C D +   LG +
Sbjct: 357 R-DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQ 415

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   VK G     +V NAL+AMY +CG + EA      +E KD VSWN+ML G+ ++  
Sbjct: 416 IHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGF 475

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F  ++ AG KPD++  V  +SA    G L  G E + Y++ + +         
Sbjct: 476 GRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTE-YFYSMTKDY-------GV 527

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFI----------SWTTII-AGYAQNNCHL--KALE 348
           +       C ++ +GR      AQD I          SW  ++ A     N  L  KA E
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE 587

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSG 374
           +    ++E  ++ + ++ S L A SG
Sbjct: 588 M--VFKMEPQNSGMYVLLSNLYAASG 611



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 128/268 (47%), Gaps = 58/268 (21%)

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
            L    ++GL++ G ++   M  +Y + P  +HY C++DLLGR + LEE           
Sbjct: 770 FLLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------- 819

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
                  ALLGA R+H N ELGE  A+   ++ P N G    IS                
Sbjct: 820 -------ALLGASRIHGNTELGEKAAQMFFKMGPQNSG----IS---------------- 852

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
            +MR  G++K PG SW E+ NKIH+F        E + I               G++ + 
Sbjct: 853 -KMRDVGVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI---------------GFLEEL 896

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRI-TKNLRVCVDCHSFCKLVSR 807
              +   EEE++  + Y  SE LA A G+L    G   R+  K + VC DC S  K +S+
Sbjct: 897 DLKMREREEEKERTLKY-LSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSK 955

Query: 808 LFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + GR + +RD++RF+     +CSCG+YW
Sbjct: 956 IVGRLITLRDSHRFNE---SICSCGEYW 980



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 11/279 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YG+ G +  A + FD + QR   +W A++  Y  +G     L  +  ++  G S++  TF
Sbjct: 338 YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATF 397

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
            C +  CA +  L+ G +IHG  +K GY +  F+ N+L+AMY KC    +A   F+ + E
Sbjct: 398 GCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEE 457

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DVV WN++++ Y+  G   +AL +F  M+  G+  +  T V  L AC  +     G E
Sbjct: 458 K-DVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTE 516

Query: 182 -IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT----- 234
             ++ T   G          +I +  R G++ EA  ++  +     + SW ++L      
Sbjct: 517 YFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIH 576

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           G  +       M F  E Q +G     V   N  +ASGR
Sbjct: 577 GNTELGEKAAEMVFKMEPQNSGM---YVLLSNLYAASGR 612



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 175/410 (42%), Gaps = 71/410 (17%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N  I+ + R G    A  V   +  + SVS+N+M++G+++N  +  A   F       Q 
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF------DQM 106

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P++                                 DL   N ++  Y + C +    R+
Sbjct: 107 PER---------------------------------DLFSWNVMLTGYVRNCRLGDARRL 133

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELF------RTVQLEGLDADVMIIGSVLMAC 372
           F  M  +D +SW ++++GYAQN    +A E+F       ++   GL A  +  G +  AC
Sbjct: 134 FDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEAC 193

Query: 373 ------SGLKCMSQTKEIHGYIIRKGLSDLVIL------------NAIVDVYGKCGNIDY 414
                 S    +S    + G++ +K L D   L            N ++  Y + G +  
Sbjct: 194 LLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQ 253

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R +F+   ++DV +WT+M+S YV NG+ +EA   F  M E N E     +++       
Sbjct: 254 ARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN-EVSYNAMIAGYVQTKK 312

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           + I    +EL  F      N+  S  ++++  Y + G +  A K F+ +  +D + W ++
Sbjct: 313 MDI---AREL--FESMPCRNI--SSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAI 365

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           I      G  + A+++F +++ +  + +  TF   L  C+    +  GK+
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQ 415



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 1/141 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A   F+ + ++ V +WN ML  Y  +G   + L  +  M+  G+  D  T
Sbjct: 438 MYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEIT 497

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    LD G +  + +    G   T      ++ +  +     +A+ L   M
Sbjct: 498 MVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNM 557

Query: 120 GEKEDVVLWNSIISAYSASGQ 140
             +     W +++ A    G 
Sbjct: 558 PFQPGAASWGALLGASRIHGN 578



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 18/163 (11%)

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
            D++  N  +  + + G+ D + +VF ++  +  VS+ +MIS Y+ N   N A  LF  M
Sbjct: 47  PDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM 106

Query: 454 NEANVESDSITLVS-----ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
            E ++ S ++ L        L  A  L  L   K++  +             +SL+  YA
Sbjct: 107 PERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSW-------------NSLLSGYA 153

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           + G +D A +VF+ +  K+ I W  ++ A   +GR + A  LF
Sbjct: 154 QNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF 196



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 39/224 (17%)

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           + N    ++  D++ W   IS+++ NG  + AL +F          +++   S++S  + 
Sbjct: 37  TNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVF----------NTMPRRSSVSYNAM 86

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDM-----------YARCGALDIANKVFNCV 523
           +S         G++    FNL  ++   + +            Y R   L  A ++F+ +
Sbjct: 87  IS---------GYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLM 137

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
             KD++ W S+++    +G    A ++F  M  +    + I++  LL A  H+G I E  
Sbjct: 138 PEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEAC 193

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
              E  + D+ L  W     CL+    R   L +A      M +
Sbjct: 194 LLFE-SKSDWDLISW----NCLMGGFVRKKKLGDARWLFDKMPV 232


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 227/658 (34%), Positives = 384/658 (58%), Gaps = 4/658 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALI--AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           ++HA  +K+ + L   +  A++  A       +  A  +   ++  +S ++N M+ G   
Sbjct: 39  QVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAF 98

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                 A+  F+++     + D+    + + A  R+  L  G+++HA  +K GF S+  +
Sbjct: 99  KRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFV 158

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            NTL+ MYA C  +     VF  M  +  ++W ++++GY +N    + ++LFR +    +
Sbjct: 159 ENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRI 218

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
           + D + + SVLMAC  L  +   + I  YI+ KGL  +  +  +++D+Y KCG +D +R 
Sbjct: 219 EFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARK 278

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F+ ++ +DVV+W++MIS Y       EAL LF+ M + NV  + +T+VS L + + L  
Sbjct: 279 LFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGA 338

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
            + GK ++ +I +K   L  ++ + L+D YA+CG +D + +VF  +  K++  WT++I  
Sbjct: 339 YETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQG 398

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              +G GK+A++ F  M      P+ +TF+ +L ACSH+ L+++G+     MR D+ ++P
Sbjct: 399 LANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEP 458

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHY C+VD+LGRA  LEEAYQF+ +M   P A VW  LL +CR H N E+ E   + +
Sbjct: 459 RIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHI 518

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
             L+P + G+Y+L+SN +A   + +D  +VR  ++   +KK PG S IE+   +H F + 
Sbjct: 519 TRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSE 578

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D  H  S EI+  L ++ ++++R  GYV  T       EEE K   +  HSE+LAIAYG+
Sbjct: 579 DGEHKHSKEIHDALDKMMKQIKR-LGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGL 637

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++++  + IRI+KNLR+C DCH+  K +S++F R ++VRD NRFHHF+ G+CSC DYW
Sbjct: 638 IRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 264/509 (51%), Gaps = 21/509 (4%)

Query: 53  GISVDAFT-FP-----CVIKACAMLKDLDCGAKIHGLVLKCG--YDS--TDFIVNSLVAM 102
            IS+ + T FP      +++ C   KDL    ++H  +LK     D   T+ ++ S   +
Sbjct: 10  NISLTSITQFPENPKSLILQQCKTPKDLQ---QVHAHLLKTRRLLDPIITEAVLESAALL 66

Query: 103 YAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYT 162
                D+  A  +F+ + + E    +N +I   +       AL LF++M    +  + +T
Sbjct: 67  LPDTIDY--ALSIFNHIDKPESSA-YNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFT 123

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
           F + L+AC        G ++HA  +KSG     +V N LI MYA CG++  A  V   + 
Sbjct: 124 FSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMP 183

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
            +  V+WNSML+G+ +N L+ + ++ FR++     + D V  ++ + A GRL NL  G+ 
Sbjct: 184 ERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGEL 243

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           +  Y + +G   +  +  +L+DMYAKC  V+   ++F +M  +D ++W+ +I+GYAQ + 
Sbjct: 244 IGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADR 303

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA- 401
             +AL LF  +Q   +  + + + SVL +C+ L      K +H YI +K +   V L   
Sbjct: 304 CKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQ 363

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           ++D Y KCG ID S  VF+ +  K+V +WT++I    +NG    ALE F  M E +V+ +
Sbjct: 364 LIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPN 423

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANK- 518
            +T +  LSA S   ++ +G+ L    +R+ F++E  +     +VD+  R G L+ A + 
Sbjct: 424 DVTFIGVLSACSHACLVDQGRHLFNS-MRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQF 482

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVA 547
           + N     + ++W +++ +   H   ++A
Sbjct: 483 IDNMPFPPNAVVWRTLLASCRAHKNIEMA 511



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 244/486 (50%), Gaps = 14/486 (2%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F+ + +     +N M+        P   L  + +M    +  D FTF  V+KAC+ 
Sbjct: 74  ALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSR 133

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           +K L  G ++H L+LK G+ S +F+ N+L+ MYA C     AR +FD M E+  +V WNS
Sbjct: 134 MKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPER-SIVAWNS 192

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           ++S Y+ +G   E + LFR++  + +  +  T ++ L AC   +   +G  I    V  G
Sbjct: 193 MLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKG 252

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
                 +  +LI MYA+CG++  A  +  +++ +D V+W++M++G+ Q D   +A+  F 
Sbjct: 253 LRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFH 312

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           E+Q     P++V  V+ + +   LG    GK +H Y  K+     + +G  L+D YAKC 
Sbjct: 313 EMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCG 372

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA-DVMIIGSVL 369
            ++    VF +M+ ++  +WT +I G A N     ALE F ++    +   DV  IG VL
Sbjct: 373 YIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIG-VL 431

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYSRNVFESIE-SKD 426
            ACS    + Q + +   + R    +  I     +VD+ G+ G ++ +    +++    +
Sbjct: 432 SACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPN 491

Query: 427 VVSWTSMISS-YVHNG--LANEALELFYLMNEAN-----VESDSITLVSALSAASSLSIL 478
            V W ++++S   H    +A ++LE    +  A+     + S++  LV  +  A  +  L
Sbjct: 492 AVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSL 551

Query: 479 KKGKEL 484
            K KE+
Sbjct: 552 IKEKEI 557



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 173/367 (47%), Gaps = 20/367 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG +  A  +FD + +R++  WN+ML  Y  NG    V++ + ++  L I  D  T
Sbjct: 165 MYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVT 224

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  L +L+ G  I   ++  G    + +  SL+ MYAKC     AR+LFD M 
Sbjct: 225 MISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEM- 283

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K DVV W+++IS Y+ + +C EAL LF EMQ+  +  N  T V+ L +C        G 
Sbjct: 284 DKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGK 343

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    K    L V +   LI  YA+CG +  +  V  ++  K+  +W +++ G   N 
Sbjct: 344 WVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNG 403

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++FF  +     KP+ V  +  +SA      +  G+ L   ++++ F  + +I  
Sbjct: 404 EGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFN-SMRRDFDIEPRI-- 460

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAG-YAQNNCHLKALEL 349
              + Y   C V+ +GR  +   A  FI           W T++A   A  N  +    L
Sbjct: 461 ---EHYG--CMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSL 515

Query: 350 FRTVQLE 356
               +LE
Sbjct: 516 EHITRLE 522


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/749 (33%), Positives = 410/749 (54%), Gaps = 27/749 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR-----TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS 55
           MY KCG +  A Q+FDK+S+       +  WN ++  Y   G     L  + RM+ L   
Sbjct: 99  MYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELSWY 158

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +                    G +IHG +++  ++   ++  +L+ MY+ C    +A  L
Sbjct: 159 M-------------------AGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSL 199

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           F ++  + ++V WN +I  +  +G   ++L L+   +       + +F  A  AC     
Sbjct: 200 FGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEV 259

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G ++H   +K       YV  +L+ MYA+ G + +A  V  Q+ +K+    N+M++ 
Sbjct: 260 LDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISA 319

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV-SASGRLGNLLNGKELHAYAIKQGFVS 294
           F+ N     A+  + +++ AG+ P    T++++ S    +G+   G+ +HA  IK+   S
Sbjct: 320 FIGNGRAYDALGLYNKMK-AGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQS 378

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           ++ I + L+ MY KC        VFY M  +D ++W ++IAG+ QN     AL+LFR ++
Sbjct: 379 NVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAME 438

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
            EG+ AD  ++ SV+ A  GL+ +     IHG+ I++GL SD+ +  ++VD+Y K G  +
Sbjct: 439 KEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAE 498

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  VF S+ +K++V+W SMIS Y  NGL   ++ L   + +     DS+++ + L A S
Sbjct: 499 SAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVS 558

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           S++ L KGK L+ + IR     +  V ++L+DMY +CG L  A  +F  +  ++L+ W S
Sbjct: 559 SVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNS 618

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           MI   G HG  + A+ LF +M+    APD +TFLAL+ +CSHSG++ EG    ++MR +Y
Sbjct: 619 MIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEY 678

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
            ++P  EHYA +VDLLGRA  L++AY F+R M I+    VW  LL ACR H N ELGE+V
Sbjct: 679 GVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELV 738

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHS 713
           A  LL+++P    NYV + N++     W     +R  M+G GLKK+PG SWIE+ N++  
Sbjct: 739 ADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDV 798

Query: 714 FIARDKSHSESDEIYKKLAEITEKLEREG 742
           F + D S +   EIYK L+ +   +E +G
Sbjct: 799 FFSGDSSSTRRIEIYKTLSSLKSNMEGKG 827



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/564 (29%), Positives = 286/564 (50%), Gaps = 27/564 (4%)

Query: 27  NAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLK 86
           N+ + A V  G+  + LE +S+     ++   FTFP ++K CA L +L  G  IH  ++ 
Sbjct: 24  NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 83

Query: 87  CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE----DVVLWNSIISAYSASGQCL 142
            G  S  +I  SL+ MY KC     A Q+FD+M E      D+ +WN +I  Y   G   
Sbjct: 84  MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 143

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           E L  F  MQ +                   S+   G +IH   +++      Y+  ALI
Sbjct: 144 EGLAQFCRMQEL-------------------SWYMAGRQIHGYIIRNMFEGDPYLETALI 184

Query: 203 AMYARCGKMTEAAGVLYQLENKDS-VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
            MY+ C +  EA  +  +LEN+ + V+WN M+ GFV+N ++ K+++ +   +    K   
Sbjct: 185 GMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVS 244

Query: 262 VCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
                A +A    G +L+ G+++H   IK  F  D  +  +L+ MYAK   V    +VF 
Sbjct: 245 ASFTGAFTACSH-GEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFD 303

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
           Q+  ++      +I+ +  N     AL L+  ++      D   I S+L  CS +     
Sbjct: 304 QVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDF 363

Query: 381 TKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
            + +H  +I++ + S++ I +A++ +Y KCG+ + + +VF +++ +DVV+W SMI+ +  
Sbjct: 364 GRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQ 423

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           N    +AL+LF  M +  V++DS  + S +SA   L  ++ G  ++GF I++G   +  V
Sbjct: 424 NRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFV 483

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
           A SLVDMY++ G  + A  VF+ +  K+L+ W SMI+    +G  +++I+L  ++    F
Sbjct: 484 ACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGF 543

Query: 560 APDHITFLALLYACSHSGLINEGK 583
             D ++   +L A S    + +GK
Sbjct: 544 YLDSVSITTVLVAVSSVAALLKGK 567



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 5/150 (3%)

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           SR  +   +++   S  S I + V  G  ++ALEL      + + +   T  S L   +S
Sbjct: 8   SRKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCAS 67

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-----QTKDLI 529
           LS L  G+ ++  I+  G   +  +A+SL++MY +CG L  A +VF+ +        D+ 
Sbjct: 68  LSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDIT 127

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESF 559
           +W  +I+    +G  +  +  F +M+  S+
Sbjct: 128 VWNPVIDGYFKYGHFEEGLAQFCRMQELSW 157


>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
 gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 266/844 (31%), Positives = 439/844 (52%), Gaps = 34/844 (4%)

Query: 1    MYGKCGSVLDAEQLFDKVSQR---TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
            MYGKCGSV  A  +F+K+  R   +V++W  ++ A+  NG  L     + +M + G+  +
Sbjct: 272  MYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPN 331

Query: 58   AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              TF  V++AC  L   +   KI   V   G +    +  + V+ +AK  D   AR +F+
Sbjct: 332  KVTFVTVLRACTTLAQCE---KIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFE 388

Query: 118  RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
             +G   +VV W  +I AY+  G    A  L++ M       NA TF+A + +C       
Sbjct: 389  NLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMD---CEPNAVTFMAVMDSCLRPEDLP 445

Query: 178  LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
               +IHA  V SG    V +   L+ MY +CG +  A  +   L+ +  V+WNSML+ F 
Sbjct: 446  RAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFA 505

Query: 238  QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
             N  Y ++++ +  +   G KPD++  +  + A   +       E   YA       D+ 
Sbjct: 506  SNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSV------SEARRYAATFELELDIA 559

Query: 298  IGNTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
              N  +  YA+C  +      F  +    + ++W  +I+G AQ+    +ALE F  ++LE
Sbjct: 560  ARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELE 619

Query: 357  GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
            G+ A+ +   + L ACS LK +++ +++H  I+ + + +  + NA++++YGKCG++D + 
Sbjct: 620  GVRANSVTYLASLEACSSLKDLTRGRQLHARILLENIHEANLSNAVINMYGKCGSLDEAM 679

Query: 417  NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            + F  +  +DV+SW +MI++Y  +G   +ALE F  M+      D  T + A+ A  S+ 
Sbjct: 680  DEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVP 739

Query: 477  ILKKGKELNGFIIRKGFNLE--GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
             L  GK ++  +      LE    VA++LV MYARCG+L  A  VF    +++L+ W+++
Sbjct: 740  SLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNL 799

Query: 535  INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE-GKKFLEIMRCDY 593
            I A   HGR   A+DLF +M+ +   PD +TF  L+ ACS  G++ + G++  + +   Y
Sbjct: 800  IAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGRVY 859

Query: 594  QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
             +    EHY C+V++LGRA  LEEA   ++ M  + +  +W ALL AC    + E G   
Sbjct: 860  PVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRGDLERGIRA 919

Query: 654  AKKLLELDPGN-PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS-SWIEIGNKI 711
            A +  +LDPG+   +  +++ ++ A+ +W+D  +VR  +     ++ PG  SWIE+ N++
Sbjct: 920  ANRAQQLDPGSFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVNNRV 979

Query: 712  HSFIARDK--SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQML-YGHS 768
            H F   D        D+I  +L  ++     EGG            +E  +  +L   HS
Sbjct: 980  HEFGEDDDRLQGPRLDKIRGELQRLSSLAVEEGGICK---------DENARAHILGCCHS 1030

Query: 769  ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA-G 827
            E++AI +G++ +  G LIRI KNLR C DCH+F K VSR   RE+ VRD    H F   G
Sbjct: 1031 EKVAIGFGIVSTPAGQLIRIVKNLRACHDCHAFAKFVSRRIQREISVRDPYGLHCFHTNG 1090

Query: 828  VCSC 831
             CSC
Sbjct: 1091 SCSC 1094



 Score =  282 bits (721), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 190/623 (30%), Positives = 322/623 (51%), Gaps = 24/623 (3%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
           S+    +  +++ CA  K    G  +H  +L  G     ++ N L+ MYAKC   + A +
Sbjct: 23  SLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVE 82

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           +F+ +    +V  W ++I+AY+  G   E LG FR+MQ  G   +A+ F   L AC  + 
Sbjct: 83  VFELL-PCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAG 141

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  IH   V +G   QV V NA++ +Y +CG++ EA  V  +L  ++ VSWN+++ 
Sbjct: 142 ALNEGKAIHDCVVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIA 200

Query: 235 GFVQNDLYCK-AMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
              QN  +CK AMQ F+ +   G  +P+    V+ V A   L +L  GK  H   I+ GF
Sbjct: 201 ANAQNG-HCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGF 259

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI---SWTTIIAGYAQNNCHLKALEL 349
            S L +GN+L++MY KC  V++   VF +M  +D +   SWT IIA +A N   L+A  L
Sbjct: 260 DSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVL 319

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGK 408
           F  + LEG+  + +   +VL AC+ L   +Q ++I   +   GL  D  +  A V  + K
Sbjct: 320 FYKMDLEGVLPNKVTFVTVLRACTTL---AQCEKIFARVKHLGLELDTTLGTAFVSTFAK 376

Query: 409 CGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
            G++  +R+VFE++  S++VVSWT MI +Y   G    A +L+  M   + E +++T ++
Sbjct: 377 LGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMA 433

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            + +      L + ++++  ++  GF  +  +   LV MY +CG++D A  +F  ++ + 
Sbjct: 434 VMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERS 493

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           ++ W SM++A   +G  + ++ L+ +M  E   PD IT+LA+L AC     ++E +++  
Sbjct: 494 VVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQS---VSEARRYAA 550

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH-SN 646
               + +LD    + A  V    R   L+EA     ++Q +  A  W A++     H  +
Sbjct: 551 TF--ELELDIAARNAA--VSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGES 606

Query: 647 KELGEIVAKKLLELDPGNPGNYV 669
           K+  E   K  LE    N   Y+
Sbjct: 607 KQALECFWKMELEGVRANSVTYL 629



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 173/594 (29%), Positives = 312/594 (52%), Gaps = 25/594 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + DA ++F+ +    VF+W A++ AY   G    VL  + +M++ G   DAF 
Sbjct: 70  MYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFV 129

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC+    L+ G  IH  V+  G + T  + N++V +Y KC    +A+ +F+R+ 
Sbjct: 130 FSTVLTACSSAGALNEGKAIHDCVVLAGME-TQVVGNAIVNLYGKCGRVHEAKAVFERLP 188

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
           E+ ++V WN++I+A + +G C +A+ +F+ M   G V  N  TFV+ + AC +      G
Sbjct: 189 ER-NLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRG 247

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV---SWNSMLTGF 236
              H   +++G +  ++V N+L+ MY +CG +  A  V  ++  +D +   SW  ++  F
Sbjct: 248 KSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAF 307

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             N    +A   F ++   G  P++V  V  + A   L      +++ A     G   D 
Sbjct: 308 AHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQC---EKIFARVKHLGLELDT 364

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQM-TAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            +G   +  +AK   +     VF  + ++++ +SWT +I  YAQ      A +L++ +  
Sbjct: 365 TLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDC 424

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
           E    + +   +V+ +C   + + + ++IH +++  G  SD+V+   +V +YGKCG++D 
Sbjct: 425 E---PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDS 481

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           + ++FE+++ + VV+W SM+S++  NG    +L+L+  M     + D IT ++ L A  S
Sbjct: 482 AWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQS 541

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVAS--SLVDMYARCGALDIANKVFNCVQTK-DLILW 531
           +S  ++            F LE  +A+  + V  YARCG+L  A   F+ +Q K + + W
Sbjct: 542 VSEARR--------YAATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTW 593

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
            +MI+    HG  K A++ F+KME E    + +T+LA L ACS    +  G++ 
Sbjct: 594 NAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQL 647


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/718 (33%), Positives = 413/718 (57%), Gaps = 8/718 (1%)

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           +    L N +I  ++ +   L+AL  +R M   G   + +TF   L+ C  +     G  
Sbjct: 82  RPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRA 141

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            HAA +K G    VY AN+L+A+YA+ G + +A  V   +  +D VSWN+M+ G+V N +
Sbjct: 142 AHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGM 201

Query: 242 YCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              A+  FRE+  A Q   D V  + A++A      L  G+E+H YAI+ G   D+++G 
Sbjct: 202 GALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGT 261

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMY KC  V +   VF +M  +  ++W  +I GYA N   + A + F  ++++G   
Sbjct: 262 SLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQV 321

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           +V+   ++L AC+  +     + +H Y++R+  L  +V+  A++++YGK G ++ S  +F
Sbjct: 322 EVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIF 381

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I  K +VSW +MI++Y++  +  EA+ LF  +    +  D  T+ + + A   L  ++
Sbjct: 382 GQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIR 441

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           + K+++ +I++ G+     + ++++ MYARCG +  + ++F+ +  KD+I W ++I    
Sbjct: 442 QCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYA 501

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HG+GK+A+++F +M+     P+  TF+++L ACS SGL  EG K    M+ +Y + P  
Sbjct: 502 IHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQI 561

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C+ DLLGRA  L E  +F+ +M I PT+ +W +LL A R  ++ ++ E  A+++ +
Sbjct: 562 EHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQ 621

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+  N G YV++S+++A + +W+DVE++R  M+  GL++T   S +E+ NK  SF+  D 
Sbjct: 622 LEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELNNKECSFVNGDM 681

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE--EEKVQMLYGHSERLAIAYGV 777
           SH +S++I+    E ++ L R  G    +   L + +        +   HS RLA+A+G+
Sbjct: 682 SHPQSEKIH----EFSDILSRNIGEDLDSSSNLRDSDPFASSTTVLPNKHSVRLAVAFGL 737

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + S  GS + + KN+RVC  CH   KL+S+  GR++VV D   +H F  G C CGDYW
Sbjct: 738 ISSEAGSPVLVKKNVRVCNHCHHALKLISKYSGRKIVVGDTKIYHIFSDGSCCCGDYW 795



 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 169/551 (30%), Positives = 276/551 (50%), Gaps = 13/551 (2%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G + +A   F  V++   F  N M+  +     PL  L  Y  M   G   D FTFP V+
Sbjct: 68  GRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVL 127

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           K CA    L  G   H  V+K G  +  +  NSLVA+YAK      A ++FD M  + D+
Sbjct: 128 KCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPAR-DI 186

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQ---RVGLVTNAYTFVAALQACEDSSFETLGMEI 182
           V WN+++  Y ++G    AL  FREM    +VG   ++   +AAL AC   S   LG EI
Sbjct: 187 VSWNTMVDGYVSNGMGALALACFREMNDALQVG--HDSVGVIAALAACCLESALALGREI 244

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H   ++ G    V V  +L+ MY +CG +  A  V  ++  +  V+WN M+ G+  N+  
Sbjct: 245 HGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERP 304

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
             A   F +++  G + + V  +N ++A  +  + L G+ +HAY +++ F+  + +   L
Sbjct: 305 VDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETAL 364

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           ++MY K   V    ++F Q+T +  +SW  +IA Y     + +A+ LF  +  + L  D 
Sbjct: 365 LEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDY 424

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFES 421
             + +V+ A   L  + Q K++H YI++ G  D  +I+NA++ +Y +CGNI  SR +F+ 
Sbjct: 425 FTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDK 484

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  KDV+SW ++I  Y  +G    ALE+F  M  + +E +  T VS L+A S   +  +G
Sbjct: 485 MPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEG 544

Query: 482 -KELNGFIIRKGFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDLILWTSMINANG 539
            KE N      G   +      + D+  R G L ++   + N        +W S++ A+ 
Sbjct: 545 WKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTAS- 603

Query: 540 LHGRGKVAIDL 550
              R K  ID+
Sbjct: 604 ---RNKNDIDI 611



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 215/448 (47%), Gaps = 21/448 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
           +Y K G V DAE++FD +  R + +WN M+  YVSNG     L  +  M   L +  D+ 
Sbjct: 164 LYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSV 223

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
                + AC +   L  G +IHG  ++ G +    +  SLV MY KC +   A  +F +M
Sbjct: 224 GVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKM 283

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             +  VV WN +I  Y+ + + ++A   F +M+  G      T +  L AC  +     G
Sbjct: 284 PLRT-VVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFG 342

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +HA  V+      V +  AL+ MY + GK+  +  +  Q+ +K  VSWN+M+  ++  
Sbjct: 343 RSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYM 402

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           ++Y +A+  F EL      PD       V A   LG++   K++H+Y +K G+     I 
Sbjct: 403 EMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIM 462

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N +M MYA+C  +     +F +M  +D ISW TII GYA +     ALE+F  ++  G++
Sbjct: 463 NAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGME 522

Query: 360 ADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
            +     SVL ACS       G K  +  ++ +G I       +     + D+ G+ G +
Sbjct: 523 PNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMI-----PQIEHYGCMTDLLGRAGEL 577

Query: 413 DYSRNVFESIESKDVVS----WTSMISS 436
              R V   IE+  +      W S++++
Sbjct: 578 ---REVLRFIENMPIAPTSRIWGSLLTA 602



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 194/391 (49%), Gaps = 4/391 (1%)

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
             +LI  +   G+M EAA     +    +   N M+ GF   DL   A+  +R +  AG 
Sbjct: 57  PKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGA 116

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +PD+      +    R G L  G+  HA  IK G  +D+   N+L+ +YAK   V    R
Sbjct: 117 RPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAER 176

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA--DVMIIGSVLMACSGL 375
           VF  M A+D +SW T++ GY  N     AL  FR +  + L    D + + + L AC   
Sbjct: 177 VFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMN-DALQVGHDSVGVIAALAACCLE 235

Query: 376 KCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
             ++  +EIHGY IR GL  D+ +  ++VD+Y KCGN+ ++ NVF  +  + VV+W  MI
Sbjct: 236 SALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMI 295

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
             Y  N    +A + F  M     + + +T ++ L+A +       G+ ++ +++R+ F 
Sbjct: 296 GGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFL 355

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
               + ++L++MY + G ++ + K+F  +  K L+ W +MI A       + AI LF ++
Sbjct: 356 PHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLEL 415

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKF 585
             +   PD+ T   ++ A    G I + K+ 
Sbjct: 416 LNQPLYPDYFTMTTVVPAFVLLGSIRQCKQM 446


>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/750 (34%), Positives = 415/750 (55%), Gaps = 40/750 (5%)

Query: 1    MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
             Y KC     A +LF ++  R VF+W A++G     G     L  +  M+  G+  D F 
Sbjct: 1220 FYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFV 1279

Query: 61   FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             P V+KAC  L+ +  G  +HG VLK G+ +  F+ +SLV MY KC     AR++FD M 
Sbjct: 1280 LPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMV 1339

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            EK +VV WNS+I  Y  +G   EA+ +F +M+  G+     T  + L A  +      G 
Sbjct: 1340 EK-NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGK 1398

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            + HA  + +  +L   + +++I  Y++ G + +A  V  ++  KD V+WN +++ +VQ+ 
Sbjct: 1399 QGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHH 1458

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               KA+     ++    + D V   + +SAS    N+  GKE H Y I++   SD+ + N
Sbjct: 1459 QVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVAN 1518

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            +++DMYAKC  ++   +VF   T +D + W T++A YAQ     +AL+LF  +Q + +  
Sbjct: 1519 SIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPP 1578

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE 420
            +V+   SV++               G++                   + G ++ ++++F 
Sbjct: 1579 NVISWNSVIL---------------GFL-------------------RNGQVNEAKDMFS 1604

Query: 421  SIES----KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
             ++S     ++++WT++IS    +G   EA+  F  M EA +     ++ S L A + + 
Sbjct: 1605 QMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIP 1664

Query: 477  ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
             L  G+ ++GFI R  F L   VA+SLVDMYA+CG++D A KVF+ + +K+L ++ +MI+
Sbjct: 1665 SLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMIS 1724

Query: 537  ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
            A  LHG+   A+ LF  ++ E   PD ITF ++L ACSH+GL+NEG      M   + ++
Sbjct: 1725 AYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMN 1784

Query: 597  PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
            P  EHY C+V LL R  +L+EA + + +M  +P A +  +LL ACR H   ELGE ++K 
Sbjct: 1785 PIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKH 1844

Query: 657  LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
            L +L+P N GNYV +SN +AA+ +W +V  +R  M+  GL+K PG SWI+ G K++ F+A
Sbjct: 1845 LFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVA 1904

Query: 717  RDKSHSESDEIYKKLAEITEKLEREGGYVA 746
             D SH +++EIY  LA +  ++ R  GYV 
Sbjct: 1905 GDGSHPKTEEIYAMLAMLLSEM-RFMGYVP 1933



 Score =  239 bits (609), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 156/521 (29%), Positives = 268/521 (51%), Gaps = 17/521 (3%)

Query: 132  ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
            IS+    G   E++ L  EM+          +   LQ C        G +IHA  +K+G 
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 1205

Query: 192  NL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML-----TGFVQNDLYCK 244
                  YV   L+  YA+C     A  + ++L  ++  SW +++      GF ++     
Sbjct: 1206 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSED----- 1260

Query: 245  AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
            A+  F E+Q  G  PD     N + A G L  +  GK +H Y +K GF + + + ++L+D
Sbjct: 1261 ALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVD 1320

Query: 305  MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
            MY KC  +    +VF  M  ++ ++W ++I GY QN  + +A+++F  +++EG++   + 
Sbjct: 1321 MYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVT 1380

Query: 365  IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
            + S L A + L  + + K+ H   I   L  D ++ ++I++ Y K G I+ +  VF  + 
Sbjct: 1381 VASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRML 1440

Query: 424  SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
             KDVV+W  +ISSYV +    +AL + +LM   N+  DS+TL S LSA++  S +K GKE
Sbjct: 1441 EKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKE 1500

Query: 484  LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
             + + IR+    +  VA+S++DMYA+C  +D A KVF+    +DL+LW +++ A    G 
Sbjct: 1501 GHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGL 1560

Query: 544  GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
               A+ LFY+M+ +S  P+ I++ +++     +G +NE K     M+      P    + 
Sbjct: 1561 SGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQ-SLGFQPNLITWT 1619

Query: 604  CLVDLLGRANHLEEAYQFVRSMQ---IEPTAEVWCALLGAC 641
             L+  L ++    EA  F + MQ   I P+     ++L AC
Sbjct: 1620 TLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLAC 1660



 Score =  239 bits (609), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 170/586 (29%), Positives = 293/586 (50%), Gaps = 41/586 (6%)

Query: 64   VIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRK-ARQLFDRMG 120
            +++ C   + L  G +IH  +LK G  +   +++   LV  YAKC DF + A +LF R+ 
Sbjct: 1180 LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKC-DFPEVAVRLFHRLR 1238

Query: 121  EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             + +V  W +I+      G   +AL  F EMQ  G+  + +     L+AC       LG 
Sbjct: 1239 VR-NVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGK 1297

Query: 181  EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
             +H   +K G    V+V+++L+ MY +CG + +A  V   +  K+ V+WNSM+ G+VQN 
Sbjct: 1298 GVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNG 1357

Query: 241  LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            L  +A+  F +++  G +P +V   + +SAS  L  L+ GK+ HA AI      D  +G+
Sbjct: 1358 LNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGS 1417

Query: 301  TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++++ Y+K   +     VF +M  +D ++W  +I+ Y Q++   KAL +   ++ E L  
Sbjct: 1418 SIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRF 1477

Query: 361  DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
            D + + S+L A +    +   KE H Y IR+ L SD+V+ N+I+D+Y KC  ID +R VF
Sbjct: 1478 DSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVF 1537

Query: 420  ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            +S   +D+V W +++++Y   GL+ EAL+LFY M   +V  + I+  S +     L  L+
Sbjct: 1538 DSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI-----LGFLR 1592

Query: 480  KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
             G+                  +   DM+++  +L             +LI WT++I+   
Sbjct: 1593 NGQ-----------------VNEAKDMFSQMQSLGF---------QPNLITWTTLISGLA 1626

Query: 540  LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPW 598
              G G  AI  F KM+     P   +  ++L AC+    +  G+     I R ++ L   
Sbjct: 1627 QSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLS-- 1684

Query: 599  PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
                  LVD+  +   ++EA + V  M       ++ A++ A  +H
Sbjct: 1685 VPVATSLVDMYAKCGSIDEAKK-VFHMMSSKELPIYNAMISAYALH 1729


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 266/749 (35%), Positives = 406/749 (54%), Gaps = 63/749 (8%)

Query: 92  TDFIV--NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           ++FI+  NSL+  Y++     KAR +FD M +K +++ WNSI++ Y  + +  EA  +F 
Sbjct: 95  SNFIISRNSLITRYSRLGQIEKARVVFDEMRDK-NIISWNSIVAGYFQNKRPQEAQNMFD 153

Query: 150 EM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA-NALIAMYAR 207
           +M +R  +  N             S +   GM   A  V      +  V+  A++  Y +
Sbjct: 154 KMSERNTISWNGLV----------SGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVK 203

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
            G ++EA  + +Q+  K+ VSW  ML G +Q     +A + F  +     + D V   N 
Sbjct: 204 EGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNM 259

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           +    ++G L+  + L     ++  VS      T++  Y +   V+   ++F  M  ++ 
Sbjct: 260 IGGYCQVGRLVEARMLFDEMPRRNVVS----WTTMITGYVQNQQVDIARKLFEVMPEKNE 315

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SWT ++ GY       +A ELF          + M I SV+ AC               
Sbjct: 316 VSWTAMLKGYTNCGRLDEASELF----------NAMPIKSVV-AC--------------- 349

Query: 388 IIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
                       NA++  +G+ G +  +R VF+ +  KD  +W++MI  Y   GL  +AL
Sbjct: 350 ------------NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDAL 397

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
           ELF +M    +  +  +L+S LS  + L+ L  G+E++  ++R  F+L+  VAS L+ MY
Sbjct: 398 ELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMY 457

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
            +CG L  A +VF+    KD+++W S+I     HG G  A+ +F+ M      PD +TF+
Sbjct: 458 IKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFV 517

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
            +L ACS++G + +G +    M   YQ++   EHYAC+VDLLGRA  L EA   +  M +
Sbjct: 518 GVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPM 577

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
           E  A +W ALLGACR H   +L E+ AKKLL L+P N G ++L+SN++A+  +W DV ++
Sbjct: 578 EADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAEL 637

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS-HSESDEIYKKLAEITEKLEREGGYVA 746
           R  MR   + K PG SWI +  K+H F   D S H E  EI  ++ E    L RE GY  
Sbjct: 638 RRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEI-NRILEWLSGLLREAGYYP 696

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
              FVLH+V+EEEKVQ L  HSE+LA+AYG+LK   G  IR+ KNLRVC DCH+  KL++
Sbjct: 697 DQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIA 756

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ GRE+++RDANRFHHF+ G CSC DYW
Sbjct: 757 KVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 214/454 (47%), Gaps = 37/454 (8%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGI-----SVDAFTFPCV 64
           +A+ +FDK+S+R   +WN ++  Y++NG      E + RM    +      V  +    +
Sbjct: 147 EAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGM 206

Query: 65  IKACAML------KDLDCGAKIHGLVLKCG--------YD---STDFIVNS-LVAMYAKC 106
           I     L      K++     + G +L+ G        +D     D +  + ++  Y + 
Sbjct: 207 ISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQV 266

Query: 107 YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
               +AR LFD M  + +VV W ++I+ Y  + Q   A  LF  M       N  ++ A 
Sbjct: 267 GRLVEARMLFDEM-PRRNVVSWTTMITGYVQNQQVDIARKLFEVMPE----KNEVSWTAM 321

Query: 167 LQACEDSSFETLGMEI-HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD 225
           L+   +        E+ +A  +KS     V   NA+I  + + G++ +A  V  Q+  KD
Sbjct: 322 LKGYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMREKD 376

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
             +W++M+  + +  L   A++ FR +Q  G +P+    ++ +S    L NL +G+E+HA
Sbjct: 377 EGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHA 436

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
             ++  F  D+ + + L+ MY KC  +    +VF +   +D + W +II GYAQ+   ++
Sbjct: 437 QLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVE 496

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN--AIV 403
           AL +F  +   G+  D +    VL ACS    + +  EI   +  K   +  I +   +V
Sbjct: 497 ALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMV 556

Query: 404 DVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           D+ G+ G ++ + ++ E +  + D + W +++ +
Sbjct: 557 DLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 131/236 (55%), Gaps = 7/236 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           +G+ G V  A Q+FD++ ++   TW+AM+  Y   G  L  LE +  M+  GI  +  + 
Sbjct: 356 FGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSL 415

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+  CA L +LD G +IH  +++  +D   ++ + L++MY KC +  KA+Q+FDR   
Sbjct: 416 ISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAV 475

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DVV+WNSII+ Y+  G  +EAL +F +M   G++ +  TFV  L AC  +     G+E
Sbjct: 476 K-DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLE 534

Query: 182 IHAA---TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           I  +     +  Q ++ Y    ++ +  R GK+ EA  ++ ++    D++ W ++L
Sbjct: 535 IFNSMETKYQVEQKIEHYA--CMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A+Q+FD+ + + V  WN+++  Y  +G  +  L  +  M   GI  D  T
Sbjct: 456 MYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVT 515

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FRKAR 113
           F  V+ AC+   ++  G +I   +       T + V   +  YA   D         +A 
Sbjct: 516 FVGVLSACSYTGNVKKGLEIFNSM------ETKYQVEQKIEHYACMVDLLGRAGKLNEAM 569

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
            L ++M  + D ++W +++ A
Sbjct: 570 DLIEKMPMEADAIIWGALLGA 590


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/752 (34%), Positives = 414/752 (55%), Gaps = 65/752 (8%)

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
           + S+  I    ++ +A+     +AR +FD +  K  V  WN+I++ Y  + +  EA  LF
Sbjct: 12  FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKT-VTSWNAIVAGYFHNKRPAEAQKLF 70

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            +M     ++                                        N L++ Y + 
Sbjct: 71  DKMPERNTIS---------------------------------------WNGLVSGYVKN 91

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G ++EA  V  ++  ++ VSW SM+ G+VQ  L  +A   F  +      P++    N V
Sbjct: 92  GMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRM------PEK----NVV 141

Query: 269 SASGRLGNLL-NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR---VFYQMTA 324
           S +  LG L+ +G+   A  +         + +T  +M    C    +     +F +M  
Sbjct: 142 SWTVMLGGLIEDGRVDEARRLFDMIPVKDVVAST--NMIGGLCSEGRLSEAREIFDEMPQ 199

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           ++ ++WT++I+GYA NN    A +LF  +     D + +   ++L   +    +++  E+
Sbjct: 200 RNVVAWTSMISGYAMNNKVDVARKLFEVMP----DKNEVTWTAMLKGYTRSGRINEAAEL 255

Query: 385 HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
              +  K ++     N ++  +G  G +  +R VF+ ++ KD  +W+++I  Y   G   
Sbjct: 256 FKAMPVKPVA---ACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFEL 312

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           EAL LF LM    V  +  +++S LS   SL+ L  G++++  ++R  F+L+  V+S L+
Sbjct: 313 EALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLI 372

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
            MY +CG L    +VF+   +KD+++W S+I     HG G+ A+++F++M +   APD I
Sbjct: 373 TMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEI 432

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF+ +L AC ++G + EG +  E M+  YQ+D   EHYAC+VDLLGRA  L EA   + +
Sbjct: 433 TFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIEN 492

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M +E  A VW ALL ACR H N +L EI AKKLL+L+P + G Y+L+SN++A+  +WKDV
Sbjct: 493 MPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDV 552

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI-ARDKSHSESDEIYKKLAEITEKLEREGG 743
            ++R  MR   + K+PG SWIE+ NK+H F      SH E + I KKL ++   L RE G
Sbjct: 553 AELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASL-REAG 611

Query: 744 YVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
           Y     FV+H+V+EE+KV  L  HSE++A+AYG+LK   G  IR+ KNLRVC DCHS  K
Sbjct: 612 YCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIK 671

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L++++ GRE+++RDANRFHHF+ G+CSC D+W
Sbjct: 672 LIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 119/236 (50%), Gaps = 3/236 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           +G  G V  A  +FD++ ++   TW+A++  Y   G  L  L  +S M+  G+  +  + 
Sbjct: 274 FGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSI 333

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++  C  L  LD G ++H  +++  +D   ++ + L+ MY KC D    +++FDR   
Sbjct: 334 ISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSS 393

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D+V+WNSII+ Y+  G   +AL +F EM   G   +  TF+  L AC  +     G+E
Sbjct: 394 K-DIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLE 452

Query: 182 IHAATVKSGQNLQVYVANA-LIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
           I  +     Q  Q     A ++ +  R GK+ EA  ++  +    D++ W ++L+ 
Sbjct: 453 IFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG ++  +++FD+ S + +  WN+++  Y  +G   + LE +  M   G + D  T
Sbjct: 374 MYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEIT 433

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC     +  G +I   +  K   D        +V +  +     +A  L + M
Sbjct: 434 FIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENM 493

Query: 120 GEKEDVVLWNSIISA 134
             + D ++W +++SA
Sbjct: 494 PVEADAIVWGALLSA 508


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/688 (36%), Positives = 391/688 (56%), Gaps = 34/688 (4%)

Query: 181 EIHAATVKSGQNLQV-YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           ++HA  ++S  +     +   +I+  A    +  A  V   +   ++   N  L    ++
Sbjct: 41  QVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRS 100

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +   K +  +  ++  G   D+      + A  R+ +L+ G E+H  A K GF SD  + 
Sbjct: 101 EEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQ 160

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+ MYA C  +     +F +M  +D ++W+ +I GY Q+     AL LF  ++   ++
Sbjct: 161 TGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVE 220

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-------------------------- 393
            D M++ +VL AC     +S  K IH +I+   +                          
Sbjct: 221 PDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNL 280

Query: 394 ------SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
                  +LV   A+V  Y K G I+ +R+VF  +  KD+V W++MIS Y  +    EAL
Sbjct: 281 FEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEAL 340

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
            LF  M    ++ D +T++S ++A + L  L + K ++ F+ + GF     + ++L++MY
Sbjct: 341 NLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMY 400

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           A+CG+L+ A ++F+ +  K++I WT MI+A  +HG    A+  F++ME E+  P+ ITF+
Sbjct: 401 AKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFV 460

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
            +LYACSH+GL+ EG+K    M  ++ + P   HY C+VDL GRAN L EA + V +M +
Sbjct: 461 GVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPL 520

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
            P   +W +L+ ACRVH   ELGE  AK+LLELDP + G +V +SN++A +R+W+DV QV
Sbjct: 521 APNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQV 580

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           R  M+  G+ K  G S  E+ N+IH F+  D+SH  +DEIY+KL E+  KL +  GY   
Sbjct: 581 RKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKL-KLVGYSPN 639

Query: 748 TQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSR 807
           T  +L ++EEEEK +++  HSE+LA+ YG+++   GS IRI KNLRVC DCH+F KL S+
Sbjct: 640 TCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASK 699

Query: 808 LFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ RE+VVRD  RFHH++ GVCSC DYW
Sbjct: 700 VYEREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 269/532 (50%), Gaps = 41/532 (7%)

Query: 79  KIHGLVLKCGYD-STDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           ++H  +L+   D ST  +V  +++  A       A  +F+ +  K +  L N  +   S 
Sbjct: 41  QVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLI-PKPETHLCNRFLRELSR 99

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
           S +  + L ++  M+  GL  + ++F   L+A         G+EIH    K G +   +V
Sbjct: 100 SEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFV 159

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
              L+ MYA CG++ EA  +  ++ ++D V+W+ M+ G+ Q+ L+  A+  F E++    
Sbjct: 160 QTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNV 219

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY--- 314
           +PD++     +SA GR GNL  GK +H + ++   V D  + + L+ MYA C  ++    
Sbjct: 220 EPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALN 279

Query: 315 ----------------------MGR------VFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
                                 +G+      VF QM  +D + W+ +I+GYA+++   +A
Sbjct: 280 LFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEA 339

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDV 405
           L LF  +Q  G+  D + + SV+ AC+ L  + Q K IH ++ + G    L I NA++++
Sbjct: 340 LNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEM 399

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y KCG+++ +R +F+ +  K+V+SWT MIS++  +G A  AL  F+ M + N+E + IT 
Sbjct: 400 YAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITF 459

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIANKVFNCVQ 524
           V  L A S   ++++G+++   +I +       V    +VD++ R   L  A ++   + 
Sbjct: 460 VGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMP 519

Query: 525 -TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH---ITFLALLYA 572
              ++I+W S++ A  +H  G++ +  F         PDH     FL+ +YA
Sbjct: 520 LAPNVIIWGSLMAACRVH--GEIELGEFAAKRLLELDPDHDGAHVFLSNIYA 569



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 233/465 (50%), Gaps = 36/465 (7%)

Query: 7   SVLD-AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           S LD A  +F+ + +      N  L     + EP + L  Y RMR  G++VD F+FP ++
Sbjct: 70  SSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLL 129

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KA + +K L  G +IHGL  K G+DS  F+   LV MYA C    +AR +FD+M  + DV
Sbjct: 130 KALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHR-DV 188

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V W+ +I  Y  SG   +AL LF EM+   +  +       L AC  +   + G  IH  
Sbjct: 189 VTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDF 248

Query: 186 TVKSGQNLQVYVANALIAMYARCG----------KMTE---------------------A 214
            +++   +  ++ +AL+ MYA CG          KMT                      A
Sbjct: 249 IMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENA 308

Query: 215 AGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
             V  Q+  KD V W++M++G+ ++D   +A+  F E+Q  G KPDQV  ++ ++A   L
Sbjct: 309 RSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHL 368

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G L   K +H +  K GF   L I N L++MYAKC  +    R+F +M  ++ ISWT +I
Sbjct: 369 GALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMI 428

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-- 392
           + +A +     AL  F  ++ E ++ + +    VL ACS    + + ++I   +I +   
Sbjct: 429 SAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNI 488

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
               V    +VD++G+   +  +  + E++  + +V+ W S++++
Sbjct: 489 TPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAA 533



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 168/402 (41%), Gaps = 63/402 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG + +A  +FDK+  R V TW+ M+  Y  +G     L  +  M+   +  D   
Sbjct: 166 MYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMM 225

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC    +L  G  IH  +++        + ++LV MYA C     A  LF++M 
Sbjct: 226 LSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMT 285

Query: 121 E------------------------------KEDVVLWNSIISAYSASGQCLEALGLFRE 150
                                          K+D+V W+++IS Y+ S    EAL LF E
Sbjct: 286 PKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNE 345

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           MQ +G+  +  T ++ + AC           IH    K+G    + + NALI MYA+CG 
Sbjct: 346 MQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGS 405

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           +  A  +  ++  K+ +SW  M++ F  +     A++FF +++    +P+ +  V  + A
Sbjct: 406 LERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYA 465

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
               G +  G+++        F S +   N         C V+  GR             
Sbjct: 466 CSHAGLVEEGRKI--------FYSMINEHNITPKHVHYGCMVDLFGRA------------ 505

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
                     N   +ALEL   V+   L  +V+I GS++ AC
Sbjct: 506 ----------NLLREALEL---VEAMPLAPNVIIWGSLMAAC 534


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/761 (33%), Positives = 422/761 (55%), Gaps = 24/761 (3%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAFTFPCV 64
           G    A  LFD + + T   WN ++  ++ N  P+  L  Y+RMR       D++TF   
Sbjct: 51  GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC----------YDFRK--- 111
           +KACA  + L  G  +H  VL+  + S+  + NSL+ MY+ C          YDF     
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
            R++FD M  K +VV WN++IS Y  + + +EA  +FR M R+G+     +FV    A  
Sbjct: 171 VRRVFDTM-RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVW 229

Query: 172 DSSFETLGMEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
             +       ++   VK G +     +V ++ I MYA  G +  A  +      +++  W
Sbjct: 230 RMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVW 289

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           N+M+ G+VQN+   +A+  F ++  + Q   D V  ++A++A  +L  L  G++LHAY +
Sbjct: 290 NTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYIL 349

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K   +  + I N ++ MY++C  +    +VF  M  +D ++W T+++ + QN    + L 
Sbjct: 350 KSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLM 409

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGK 408
           L   +Q +G   D + + ++L   S L+     K+ H Y+IR G+    +   ++D+Y K
Sbjct: 410 LVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGYLIDMYAK 469

Query: 409 CGNIDYSRNVFE--SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            G I  ++ +FE  S   +D  +W +MI+ Y  NGL+ E   +F  M E NV  +++TL 
Sbjct: 470 SGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLA 529

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           S L A + +  +  GK+++GF IR   N    V ++L+DMY++ GA+  A  VF     K
Sbjct: 530 SILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEK 589

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           + + +T+MI + G HG G+ A+ LF+ M      PD +TF+A+L ACS++GL++EG +  
Sbjct: 590 NSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIF 649

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE-PTAEVWCALLGACRVHS 645
           + M  +Y++ P  EHY C+ D+LGR   + EAY+FV+ +  E  T  +W +LLGACR+H 
Sbjct: 650 QSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHG 709

Query: 646 NKELGEIVAKKLLELDPGN--PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
             ELG++VA KLLE++ G+   G +VL+SN++AA   W +V++VR  MR  GL K  G S
Sbjct: 710 EFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCS 769

Query: 704 WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
           W+E+   ++ F++RD  H +  EIY+ L ++  ++ ++ GY
Sbjct: 770 WVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEM-KDAGY 809



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 196/376 (52%), Gaps = 5/376 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAF 59
           MY + G V  A ++FD   +R    WN M+G YV N  P+  ++ + + M      +D  
Sbjct: 264 MYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDV 323

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF   + A + L+ LD G ++H  +LK        I+N+++ MY++C     + ++F  M
Sbjct: 324 TFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNM 383

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E+ DVV WN+++SA+  +G   E L L  EMQ+ G + ++ T  A L    +   + +G
Sbjct: 384 LER-DVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIG 442

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ--LENKDSVSWNSMLTGFV 237
            + HA  ++ G   +  +   LI MYA+ G +T A  +  +    ++D  +WN+M+ G+ 
Sbjct: 443 KQAHAYLIRHGIQFEG-MDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYT 501

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN L  +    FR++     +P+ V   + + A   +G +  GK++H +AI+     ++ 
Sbjct: 502 QNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVF 561

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +G  L+DMY+K   + Y   VF +   ++ +++TT+I  Y Q+    +AL LF  +   G
Sbjct: 562 VGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSG 621

Query: 358 LDADVMIIGSVLMACS 373
           +  D +   ++L ACS
Sbjct: 622 IKPDSVTFVAILSACS 637



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 238/476 (50%), Gaps = 29/476 (6%)

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA-GQKPDQVCTV 265
           R G   +A  +   +    +V WN+++ GF+ N++   A+ F+  ++ +   K D     
Sbjct: 49  RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC-VNYMG-------- 316
           + + A  +  +L  GK LH + ++  F S   + N+L++MY+ C   V Y+G        
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC 168

Query: 317 ----RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
               RVF  M  ++ ++W T+I+ Y +    ++A ++FRT+   G+    +   +V  A 
Sbjct: 169 DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAV 228

Query: 373 SGLKCMSQTKEIHGYIIRKG---LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
             +        ++G +++ G   + D  ++++ + +Y + G +D++R +F+    ++   
Sbjct: 229 WRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV 288

Query: 430 WTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           W +MI  YV N    EA++LF  +M       D +T +SAL+A S L  L  G++L+ +I
Sbjct: 289 WNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYI 348

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---NGLHGRGK 545
           ++    L+  + ++++ MY+RCG++  + KVF+ +  +D++ W +M++A   NGL   G 
Sbjct: 349 LKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEG- 407

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK-FLEIMRCDYQLDPWPEHYAC 604
             + L ++M+ + F  D +T  ALL   S+      GK+    ++R   Q +    +   
Sbjct: 408 --LMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGY--- 462

Query: 605 LVDLLGRANHLEEAYQ-FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           L+D+  ++  +  A Q F ++   +     W A++     +   E G  V +K++E
Sbjct: 463 LIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIE 518



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 163/331 (49%), Gaps = 14/331 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGS+  + ++F  + +R V TWN M+ A+V NG     L     M+  G  VD+ T
Sbjct: 366 MYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVT 425

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++   + L+  + G + H  +++ G  ++  D     L+ MYAK      A+QLF++
Sbjct: 426 LTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD---GYLIDMYAKSGLITTAQQLFEK 482

Query: 119 MGEKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
               + D   WN++I+ Y+ +G   E   +FR+M    +  NA T  + L AC       
Sbjct: 483 NSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIG 542

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LG +IH   ++   N  V+V  AL+ MY++ G +T A  V  +   K+SV++ +M+  + 
Sbjct: 543 LGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYG 602

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q+ +  +A+  F  + G+G KPD V  V  +SA    G +  G       I Q    + +
Sbjct: 603 QHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLR-----IFQSMEREYK 657

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           I  +  + Y  CC  + +GRV     A +F+
Sbjct: 658 IQPS-SEHY--CCVADMLGRVGRVXEAYEFV 685


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/806 (32%), Positives = 428/806 (53%), Gaps = 28/806 (3%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-------FIVNSLVAMYAK 105
           G+     ++  ++K C  L DL  G ++H  + + G    D       F+ N LV MY K
Sbjct: 9   GVDDACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGK 68

Query: 106 CYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVA 165
           C    +A++ FD +  K ++  W SI+ AY  +G   +AL  F +M + G+  +   F+A
Sbjct: 69  CGRTDEAQRAFDSIAHK-NIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLA 127

Query: 166 ALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD 225
           AL  C        G  IH        +  + + NAL++MY +CG++  A  +   LE K+
Sbjct: 128 ALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKN 187

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-H 284
            +SW  +++ F +N    +     R +   G KPD+V  +  ++     G L     + H
Sbjct: 188 VISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAH 247

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM---TAQDFISWTTIIAGYAQNN 341
            Y +  G   +  +   L+ M+A+C  V+    +F ++   +AQ    W  +I  YA   
Sbjct: 248 DYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRG 307

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILN 400
           C  +AL L  ++QL+G+  + +   S L ACS L+     + +H  I   G   ++ + N
Sbjct: 308 CSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQ---DGRALHLLIDESGFDREVSVAN 364

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN-EANVE 459
           A+V +YG+CG++  S  +F  +  KD+ SW S I+++ ++G ++E ++L   M  E  +E
Sbjct: 365 ALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLE 424

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
             S+TLV+A+SA   L+     K ++      G   E  VA+ LVDMY + G +D A  +
Sbjct: 425 PSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYI 484

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F+    +++  W +M  A    G  +  + L   M+ + + PD +TF++LL  C HSGL+
Sbjct: 485 FDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLL 544

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA--EVWCAL 637
            E +     MR ++ +DP P+HY+C++DLL RA  L++A  F+  + +   A   +W AL
Sbjct: 545 EEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMAL 604

Query: 638 LGACRVHSNKELGEIV----AKKLLELDPGNPGN----YVLISNVFAASRKWKDVEQVRM 689
           LGACR   +           A  + +++P +  +    +V ++N+ AAS  W +   +R 
Sbjct: 605 LGACRSLGDSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRK 664

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
            M   GL+K PG S I + N++H F+A D+ H   +EIY +L  + E+   + GYV  T 
Sbjct: 665 AMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRL-ERAMVDRGYVVDTG 723

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
            V HNV E +K  +L  HSE+LA+A+GVL +  GS +RI KNLR C DCH+  KL+S + 
Sbjct: 724 MVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIE 783

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
           GRE+VVRD+NRFHHF  G CSCGDYW
Sbjct: 784 GREIVVRDSNRFHHFRNGSCSCGDYW 809



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 169/608 (27%), Positives = 293/608 (48%), Gaps = 25/608 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG   +A++ FD ++ + +F+W ++L AY   G   + LE + +M   G+  D   
Sbjct: 65  MYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLV 124

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +  C +LK L+ GA IH  +     DS   I N+LV+MY KC     A+QLFD + 
Sbjct: 125 FLAALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCL- 183

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS-FETLG 179
           E ++V+ W  ++S ++ +G+  E  GL R M   G+  +    +  L  C      +   
Sbjct: 184 EMKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDS 243

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV---SWNSMLTGF 236
              H   V SG + +  VA AL++M+ARCG++ +A  +  ++ +  +     WN+M+T +
Sbjct: 244 WMAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAY 303

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
                  +A+     LQ  G KP+    +  +S+ G   +L +G+ LH    + GF  ++
Sbjct: 304 AHRGCSKEALFLLDSLQLQGVKPN---CITFISSLGACSSLQDGRALHLLIDESGFDREV 360

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N L+ MY +C  +    ++F +M  +D  SW + IA +A +    + ++L   ++ E
Sbjct: 361 SVANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGE 420

Query: 357 -GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
            GL+   + + + + AC GL   S +K +H      GL S+  + N +VD+YGK G++D 
Sbjct: 421 GGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDT 480

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R +F+    ++V +W +M  +Y   G+    L L   M       DS+T VS LS    
Sbjct: 481 ARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGH 540

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI--- 529
             +L++ +  N   +R+ F ++ S    S ++D+ AR G L  A      +         
Sbjct: 541 SGLLEEAR-YNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSP 599

Query: 530 LWTSMINANGLHGRGKV--------AIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
           +W +++ A    G            A+D+  KME  S        +AL   C+ SG  +E
Sbjct: 600 MWMALLGACRSLGDSSSRARRAARNAMDV-EKMEPRSQHDPSAAHVALANICAASGNWDE 658

Query: 582 GKKFLEIM 589
                + M
Sbjct: 659 ALSIRKAM 666



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 179/392 (45%), Gaps = 17/392 (4%)

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--------SDLVILNAIV 403
            +   G+D        +L  C  L  ++  K +H  I   GL            + N +V
Sbjct: 4   AISRSGVDDACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLV 63

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
            +YGKCG  D ++  F+SI  K++ SWTS++ +Y H GL  +ALE F+ M +A VE D +
Sbjct: 64  QMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRL 123

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
             ++AL+    L  L+ G  ++  I  K  + +  + ++LV MY +CG LD+A ++F+C+
Sbjct: 124 VFLAALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCL 183

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           + K++I WT +++    +GR +    L   M  E   PD +  L LL  CS  G+++E  
Sbjct: 184 EMKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDS 243

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA--EVWCALLGAC 641
                      LD        L+ +  R   +++A +    +        E W A++ A 
Sbjct: 244 WMAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITA- 302

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
             H       +     L+L    P     IS++ A S   +D   + + +  SG  +   
Sbjct: 303 YAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACS-SLQDGRALHLLIDESGFDRE-- 359

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
              + + N + +   R  S  +S +++ ++AE
Sbjct: 360 ---VSVANALVTMYGRCGSLLDSAKLFSEMAE 388


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/691 (35%), Positives = 377/691 (54%), Gaps = 39/691 (5%)

Query: 183 HAATVKSGQNLQVYVANALIAM---YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           HA  VK+G +   Y  + L+ +         +  A  V    +  + + WN+ML G   +
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                 ++ +  +   G  P+       + +  +      G+++HA  +K G   D    
Sbjct: 62  SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121

Query: 300 NTLMDMYAK--------------------CCCVNYMG-----------RVFYQMTAQDFI 328
            +L+ MYA+                     C     G           +VF  +T +D +
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           SW  +I GY +N  + +ALELF+ +    +  D   + SVL AC+    +   +EIH  +
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241

Query: 389 I-RKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
               G  S L I+NA + +Y KCG+++ +  +FE +  KDVVSW ++I  Y H  L  EA
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEA 301

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR--KGFNLEGSVASSLV 504
           L LF  M  +    + +T++S L A + L  +  G+ ++ +I +  KG     ++ +SL+
Sbjct: 302 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLI 361

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMYA+CG ++ A++VFN +  K L  W +MI    +HGR   A DLF +M      PD I
Sbjct: 362 DMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDI 421

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           T + LL ACSHSGL++ G+   + +  DY + P  EHY C++DLLG A   +EA + +  
Sbjct: 422 TLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHM 481

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M +EP   +WC+LL AC++H N EL E  A+KL+E++P N G+YVL+SN++A + +W+DV
Sbjct: 482 MPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDV 541

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            ++R  + G G+KK PG S IEI + +H FI  DK H +S EIY+ L E+   LE E G+
Sbjct: 542 ARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLE-EAGF 600

Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
           V  T  VL  +EEE K   L  HSE+LAIA+G++ +  G+ + + KNLRVC +CH   KL
Sbjct: 601 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKL 660

Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +S+++ RE+V RD  RFHHF  GVCSC DYW
Sbjct: 661 ISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 152/536 (28%), Positives = 269/536 (50%), Gaps = 44/536 (8%)

Query: 81  HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK---ARQLFDRMGEKEDVVLWNSIISAYSA 137
           H  ++K G  +T++ ++ L+ +      F     A  +F+   E  ++++WN+++   ++
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEP-NLLIWNTMLRGLAS 60

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
           S   +  L ++  M   G V NAYTF   L++C  S     G +IHA  +K G  L  Y 
Sbjct: 61  SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120

Query: 198 ANALIAMYARCGKMTE-------------------------------AAGVLYQLENKDS 226
             +LI+MYAR G++ +                               A  V   +  +D 
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           VSWN+M+TG+V+N  Y +A++ F+E+     +PD+   V+ +SA  + G++  G+E+H  
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240

Query: 287 A-IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
                GF S L+I N  + +Y+KC  V     +F  ++ +D +SW T+I GY   N + +
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 300

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVIL-NAI 402
           AL LF+ +   G   + + + SVL AC+ L  +   + IH YI +  KG+++   L  ++
Sbjct: 301 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSL 360

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +D+Y KCG+I+ +  VF S+  K + SW +MI  +  +G AN A +LF  M +  +E D 
Sbjct: 361 IDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDD 420

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVF 520
           ITLV  LSA S   +L  G+ +   + +  +N+   +     ++D+    G    A ++ 
Sbjct: 421 ITLVGLLSACSHSGLLDLGRHIFKSVTQD-YNITPKLEHYGCMIDLLGHAGLFKEAEEII 479

Query: 521 NCVQTK-DLILWTSMINANGLHGRGKVAIDLFYK-MEAESFAPDHITFLALLYACS 574
           + +  + D ++W S++ A  +HG  ++A     K ME E         L+ +YA +
Sbjct: 480 HMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATA 535



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 232/500 (46%), Gaps = 77/500 (15%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F+   +  +  WN ML    S+ + +  LE Y RM   G   +A+TFP ++K+CA 
Sbjct: 36  AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK---------------------CY-- 107
            K  + G +IH  V+K G +   +   SL++MYA+                     C   
Sbjct: 96  SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155

Query: 108 --------DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN 159
                   D R AR++FD + E+ DVV WN++I+ Y  +    EAL LF+EM R  +  +
Sbjct: 156 ITGYASRGDVRSARKVFDXITER-DVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPD 214

Query: 160 AYTFVAALQACEDSSFETLGMEIHA-ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
             T V+ L AC  S    LG EIH       G    + + NA I +Y++CG +  A+G+ 
Sbjct: 215 EGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLF 274

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
             L  KD VSWN+++ G+   +LY +A+  F+E+  +G+ P+ V  ++ + A   LG + 
Sbjct: 275 EGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID 334

Query: 279 NGKELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
            G+ +H Y  K  +G  +   +  +L+DMYAKC  +    +VF  M  +   SW  +I G
Sbjct: 335 IGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFG 394

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL 396
           +A +     A +LF  ++  G++ D + +  +L ACS                       
Sbjct: 395 FAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACS----------------------- 431

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIE-----SKDVVSWTSMISSYVHNGLANEALELFY 451
                        G +D  R++F+S+      +  +  +  MI    H GL  EA E+ +
Sbjct: 432 -----------HSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIH 480

Query: 452 LMNEANVESDSITLVSALSA 471
           +M    +E D +   S L A
Sbjct: 481 MM---PMEPDGVIWCSLLKA 497



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 153/330 (46%), Gaps = 12/330 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G V  A ++FD +++R V +WNAM+  YV N      LE +  M    +  D  T 
Sbjct: 159 YASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTL 218

Query: 62  PCVIKACAMLKDLDCGAKIHGLV-LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             V+ ACA    ++ G +IH LV    G+ S+  IVN+ + +Y+KC D   A  LF+ + 
Sbjct: 219 VSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLS 278

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K DVV WN++I  Y+      EAL LF+EM R G   N  T ++ L AC       +G 
Sbjct: 279 CK-DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGR 337

Query: 181 EIHAATVK--SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            IH    K   G      +  +LI MYA+CG +  A  V   + +K   SWN+M+ GF  
Sbjct: 338 WIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAM 397

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A   F  ++  G +PD +  V  +SA    G L  G+ +        F S  Q 
Sbjct: 398 HGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHI--------FKSVTQD 449

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            N    +    C ++ +G       A++ I
Sbjct: 450 YNITPKLEHYGCMIDLLGHAGLFKEAEEII 479



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  LF+ +S + V +WN ++G Y         L  +  M   G S +  T
Sbjct: 260 LYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 319

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              V+ ACA L  +D G  IH  + K   G  +   +  SL+ MYAKC D   A Q+F+ 
Sbjct: 320 MLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNS 379

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K  +  WN++I  ++  G+   A  LF  M++ G+  +  T V  L AC  S    L
Sbjct: 380 MMHK-SLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDL 438

Query: 179 GMEIHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           G  I  +  +       L+ Y    +I +    G   EA  +++ +    D V W S+L
Sbjct: 439 GRHIFKSVTQDYNITPKLEHY--GCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLL 495



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 13/147 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A Q+F+ +  +++ +WNAM+  +  +G      + +SRMR  GI  D  T
Sbjct: 363 MYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDIT 422

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FRKAR 113
              ++ AC+    LD G  I   V      + D+ +   +  Y    D       F++A 
Sbjct: 423 LVGLLSACSHSGLLDLGRHIFKSV------TQDYNITPKLEHYGCMIDLLGHAGLFKEAE 476

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQ 140
           ++   M  + D V+W S++ A    G 
Sbjct: 477 EIIHMMPMEPDGVIWCSLLKACKMHGN 503


>gi|297796091|ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311765|gb|EFH42189.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 878

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/828 (31%), Positives = 435/828 (52%), Gaps = 19/828 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K   + +A +LFD++ QRTVF W  M+ A+  + E    L  +  M   GI  + FT
Sbjct: 66  LYLKTDGIWNARKLFDEMPQRTVFAWTVMISAFTKSQEFASALSLFEEMMASGIHPNEFT 125

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VI++CA L DL  G ++HG VLK G++    + +SL  +Y+KC   ++AR+LF  + 
Sbjct: 126 FSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFSSL- 184

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  D + W  +IS+   + +  EAL  + EM + G+  N +TFV  L A      E  G 
Sbjct: 185 QNADTISWTMMISSLVGARKWSEALRFYSEMIKAGVPPNEFTFVKLLGASSFLGLE-FGK 243

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH++ +  G  L V +  +L+  Y+    M +A  VL     +D   W S+++GFV+N 
Sbjct: 244 TIHSSIIVRGIPLNVVLKTSLVYFYSHFSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNL 303

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E++  G  P+       +S    + +L  GK++H+  IK GF     +GN
Sbjct: 304 RAKEAVGTFLEMRSLGLHPNNFTYSAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGN 363

Query: 301 TLMDMYAKCCCVNY-MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            L+ MY KC        RVF  M + + +SWTT+I G   +        L   +    ++
Sbjct: 364 ALVSMYMKCSASEVEASRVFGAMISPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKREVE 423

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            + + +  VL ACS LK +    EIHGY++R+ +  ++++ N++VD Y   G +DY+ NV
Sbjct: 424 PNFVTLSGVLRACSKLKYLRLVLEIHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWNV 483

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
             S++ +D +++TS+++ +   G    AL +   M    +  D ++L   +SA+++L   
Sbjct: 484 TRSMDMRDNITYTSLVTRFNELGKHEMALSVINHMYGDGIRMDQLSLPGFISASANLGAH 543

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + GK L+ + ++ GF+   SV +SLVDMY++CG+L+ A KVF  +   D++ W  +++  
Sbjct: 544 ETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIAMPDVVSWNGLVSGL 603

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
              GR   A+  F +M  +   PD +TFL LL ACS   L   G ++ + M+  + ++P 
Sbjct: 604 ASIGRISSALSAFEEMRMKGTEPDSVTFLILLSACSKGRLTEMGLEYFQSMKTIHNMEPQ 663

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY  LV +LGRA  LEEA   V +M ++P A ++  LL ACR H N  LGE +A K L
Sbjct: 664 IEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYHGNLSLGEDMANKGL 723

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
            L P +P  Y+L+++++  S K +  ++ R  M   GL K    S +E+  K+HSF+  D
Sbjct: 724 ALAPSDPAFYILLADLYDESGKPELAQKTRNLMSEKGLCKKLSKSTVEVQGKVHSFVGED 783

Query: 719 KSHSE-SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
               E +  IY ++  I E+++R G           +    E       HS + A+ YG 
Sbjct: 784 VITVEKTKRIYAEIESIKEEIKRFGS----------SYRGNENASF---HSAKQAVVYGF 830

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG-RELVVRDANRFHHF 824
           + ++  + + + KN  +C DCH F  +++R    R   V    + HH 
Sbjct: 831 IYASPEAPVHVVKNKILCKDCHDFVSILTRYMSLRMAYVLAKGKKHHL 878



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 159/565 (28%), Positives = 281/565 (49%), Gaps = 8/565 (1%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G  IH  V+K G      + N+L+++Y K      AR+LFD M ++  V  W  +ISA++
Sbjct: 41  GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQR-TVFAWTVMISAFT 99

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            S +   AL LF EM   G+  N +TF + +++C      + G  +H + +K+G      
Sbjct: 100 KSQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNSV 159

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V ++L  +Y++CGK+ EA  +   L+N D++SW  M++  V    + +A++F+ E+  AG
Sbjct: 160 VGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFYSEMIKAG 219

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             P++   V  + AS  LG L  GK +H+  I +G   ++ +  +L+  Y+    +    
Sbjct: 220 VPPNEFTFVKLLGASSFLG-LEFGKTIHSSIIVRGIPLNVVLKTSLVYFYSHFSIMEDAV 278

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           RV      QD   WT++++G+ +N    +A+  F  ++  GL  +     ++L  CS ++
Sbjct: 279 RVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAILSLCSAVR 338

Query: 377 CMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKC--GNIDYSRNVFESIESKDVVSWTSM 433
            +   K+IH   I+ G  D   + NA+V +Y KC    ++ SR VF ++ S +VVSWT++
Sbjct: 339 SLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASR-VFGAMISPNVVSWTTL 397

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I   V +G   +   L   M +  VE + +TL   L A S L  L+   E++G+++R+  
Sbjct: 398 ILGLVDHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACSKLKYLRLVLEIHGYLLRRHV 457

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
           + E  V +SLVD YA  G +D A  V   +  +D I +TS++      G+ ++A+ +   
Sbjct: 458 DGEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRDNITYTSLVTRFNELGKHEMALSVINH 517

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           M  +    D ++    + A ++ G  +E  K L                  LVD+  +  
Sbjct: 518 MYGDGIRMDQLSLPGFISASANLG-AHETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCG 576

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALL 638
            LE+A +    + + P    W  L+
Sbjct: 577 SLEDAKKVFEEIAM-PDVVSWNGLV 600



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 200/410 (48%), Gaps = 4/410 (0%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L  CE SS   +G+ IH   +K G    + + N L+++Y +   +  A  +  ++  +  
Sbjct: 30  LSFCESSS-SRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTV 88

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
            +W  M++ F ++  +  A+  F E+  +G  P++    + + +   LG+L  G  +H  
Sbjct: 89  FAWTVMISAFTKSQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGS 148

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            +K GF  +  +G++L D+Y+KC  +     +F  +   D ISWT +I+         +A
Sbjct: 149 VLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEA 208

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDV 405
           L  +  +   G+  +      +L A S L  +   K IH  II +G+  ++V+  ++V  
Sbjct: 209 LRFYSEMIKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSSIIVRGIPLNVVLKTSLVYF 267

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y     ++ +  V  S   +DV  WTS++S +V N  A EA+  F  M    +  ++ T 
Sbjct: 268 YSHFSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTY 327

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI-ANKVFNCVQ 524
            + LS  S++  L  GK+++   I+ GF     V ++LV MY +C A ++ A++VF  + 
Sbjct: 328 SAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVFGAMI 387

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           + +++ WT++I     HG  +    L  +M      P+ +T   +L ACS
Sbjct: 388 SPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACS 437


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 266/749 (35%), Positives = 406/749 (54%), Gaps = 63/749 (8%)

Query: 92  TDFIV--NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           ++FI+  NSL+  Y++     KAR +FD M +K +++ WNSI++ Y  + +  EA  +F 
Sbjct: 95  SNFIISRNSLITRYSRLGQIEKARVVFDEMRDK-NIISWNSIVAGYFQNKRPQEAQNMFD 153

Query: 150 EM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA-NALIAMYAR 207
           +M +R  +  N             S +   GM   A  V      +  V+  A++  Y +
Sbjct: 154 KMSERNTISWNGLV----------SGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVK 203

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
            G ++EA  + +Q+  K+ VSW  ML G +Q     +A + F  +     + D V   N 
Sbjct: 204 EGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNM 259

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           +    ++G L+  + L     ++  VS      T++  Y +   V+   ++F  M  ++ 
Sbjct: 260 IGGYCQVGRLVEARMLFDEMPRRNVVS----WTTMITGYVQNQQVDIARKLFEVMPEKNE 315

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SWT ++ GY       +A ELF          + M I SV+ AC               
Sbjct: 316 VSWTAMLKGYTNCGRLDEASELF----------NAMPIKSVV-AC--------------- 349

Query: 388 IIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
                       NA++  +G+ G +  +R VF+ +  KD  +W++MI  Y   GL  +AL
Sbjct: 350 ------------NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDAL 397

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
           ELF +M    +  +  +L+S LS  + L+ L  G+E++  ++R  F+L+  VAS L+ MY
Sbjct: 398 ELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMY 457

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
            +CG L  A +VF+    KD+++W S+I     HG G  A+ +F+ M      PD +TF+
Sbjct: 458 IKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFV 517

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
            +L ACS++G + +G +    M   YQ++   EHYAC+VDLLGRA  L EA   +  M +
Sbjct: 518 GVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPM 577

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
           E  A +W ALLGACR H   +L E+ AKKLL L+P N G ++L+SN++A+  +W DV ++
Sbjct: 578 EADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAEL 637

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS-HSESDEIYKKLAEITEKLEREGGYVA 746
           R  MR   + K PG SWI +  K+H F   D S H E  EI  ++ E    L RE GY  
Sbjct: 638 RRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEI-NRILEWLSGLLREAGYYP 696

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
              FVLH+V+EEEKVQ L  HSE+LA+AYG+LK   G  IR+ KNLRVC DCH+  KL++
Sbjct: 697 DQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIA 756

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ GRE+++RDANRFHHF+ G CSC DYW
Sbjct: 757 KVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 214/454 (47%), Gaps = 37/454 (8%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGI-----SVDAFTFPCV 64
           +A+ +FDK+S+R   +WN ++  Y++NG      E + RM    +      V  +    +
Sbjct: 147 EAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGM 206

Query: 65  IKACAML------KDLDCGAKIHGLVLKCG--------YD---STDFIVNS-LVAMYAKC 106
           I     L      K++     + G +L+ G        +D     D +  + ++  Y + 
Sbjct: 207 ISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQV 266

Query: 107 YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
               +AR LFD M  + +VV W ++I+ Y  + Q   A  LF  M       N  ++ A 
Sbjct: 267 GRLVEARMLFDEM-PRRNVVSWTTMITGYVQNQQVDIARKLFEVMPE----KNEVSWTAM 321

Query: 167 LQACEDSSFETLGMEI-HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD 225
           L+   +        E+ +A  +KS     V   NA+I  + + G++ +A  V  Q+  KD
Sbjct: 322 LKGYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMREKD 376

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
             +W++M+  + +  L   A++ FR +Q  G +P+    ++ +S    L NL +G+E+HA
Sbjct: 377 EGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHA 436

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
             ++  F  D+ + + L+ MY KC  +    +VF +   +D + W +II GYAQ+   ++
Sbjct: 437 QLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVE 496

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN--AIV 403
           AL +F  +   G+  D +    VL ACS    + +  EI   +  K   +  I +   +V
Sbjct: 497 ALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMV 556

Query: 404 DVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           D+ G+ G ++ + ++ E +  + D + W +++ +
Sbjct: 557 DLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 131/236 (55%), Gaps = 7/236 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           +G+ G V  A Q+FD++ ++   TW+AM+  Y   G  L  LE +  M+  GI  +  + 
Sbjct: 356 FGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSL 415

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+  CA L +LD G +IH  +++  +D   ++ + L++MY KC +  KA+Q+FDR   
Sbjct: 416 ISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAV 475

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DVV+WNSII+ Y+  G  +EAL +F +M   G++ +  TFV  L AC  +     G+E
Sbjct: 476 K-DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLE 534

Query: 182 IHAA---TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           I  +     +  Q ++ Y    ++ +  R GK+ EA  ++ ++    D++ W ++L
Sbjct: 535 IFNSMETKYQVEQKIEHYA--CMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A+Q+FD+ + + V  WN+++  Y  +G  +  L  +  M   GI  D  T
Sbjct: 456 MYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVT 515

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FRKAR 113
           F  V+ AC+   ++  G +I   +       T + V   +  YA   D         +A 
Sbjct: 516 FVGVLSACSYTGNVKKGLEIFNSM------ETKYQVEQKIEHYACMVDLLGRAGKLNEAM 569

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
            L ++M  + D ++W +++ A
Sbjct: 570 DLIEKMPMEADAIIWGALLGA 590


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/682 (35%), Positives = 391/682 (57%), Gaps = 15/682 (2%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L+A    S    G+++HAA +K G      + N LI MYA+CGK+  A  V   +  ++ 
Sbjct: 11  LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 70

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           VSW +++ GF+ +    + ++ F E++G+G  P++      + A G  G    G ++H  
Sbjct: 71  VSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGV 128

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            ++ GF     + N+L+ MY+K        RVF  + +++  +W ++I+GYA       +
Sbjct: 129 CVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDS 188

Query: 347 LELFRTVQLEGLD-ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS---DLVILNAI 402
           L +FR +Q    +  D     S+L ACSGL    +  ++H  +  +G+S   + ++  A+
Sbjct: 189 LLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGAL 248

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +DVY KC  +  +  VF+ +E ++ + WT++I  +   G   EA+ LF     + V +D 
Sbjct: 249 LDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADG 308

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
             L S ++  +  +++++GK+++ +  +    L+ SVA+SLVDMY +CG    A + F  
Sbjct: 309 HVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFRE 368

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +  ++++ WT+MIN  G HG G+ AIDLF +M+AE    D + +LALL ACSHSGL++E 
Sbjct: 369 MPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDEC 428

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
           +++   +  D ++ P  EHYAC+VDLLGRA  L EA + + SM +EPT  VW  LL ACR
Sbjct: 429 RRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACR 488

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
           VH +  +G  V   LL +D  NP NYV++SN+ A + +W++ + +R  MR  GL+K  G 
Sbjct: 489 VHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGC 548

Query: 703 SWIEIGNKIHSFI-ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
           SW E+  ++H F    D +H ++ +I + L E+  ++    GY    +  LH+V+EE +V
Sbjct: 549 SWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRV 608

Query: 762 QMLYGHSERLAIAYGVLK--------STEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           + L  HSERLA+   +L+           G ++R+ KNLRVC DCH F K +S +  R +
Sbjct: 609 ESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVV 668

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           VVRDANRFH F+ G CSC DYW
Sbjct: 669 VVRDANRFHRFQNGACSCRDYW 690



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 261/514 (50%), Gaps = 16/514 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++FD + +R V +W A++  ++ +GE    L  +  MR  G S + FT
Sbjct: 48  MYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFT 107

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               +KAC        G +IHG+ ++ G++  D + NSLV MY+K      AR++FD + 
Sbjct: 108 LSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIP 165

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLG 179
            + ++  WNS+IS Y+ +GQ  ++L +FREMQR      + +TF + L+AC        G
Sbjct: 166 SR-NLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREG 224

Query: 180 MEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            ++HAA    G +      +A AL+ +Y +C ++  A  V   LE ++++ W +++ G  
Sbjct: 225 AQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHA 284

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q     +AM  FR    +G + D     + V+       +  GK++H Y  K     D+ 
Sbjct: 285 QEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVS 344

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N+L+DMY KC      GR F +M A++ +SWT +I G  ++    +A++LF  +Q EG
Sbjct: 345 VANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEG 404

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKCGNIDYS 415
           ++AD +   ++L ACS    + + +     I   R+          +VD+ G+ G +  +
Sbjct: 405 VEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREA 464

Query: 416 RNVFESIESKDVVS-WTSMISS-YVHNGLA--NEALELFYLMNEANVESDSITLVSALSA 471
           + +  S+  +  V  W +++S+  VH  +A   E  ++   ++  N   + + L + L+ 
Sbjct: 465 KELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDN-PVNYVMLSNILAE 523

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A      ++ + + G + RKG   +G  + + VD
Sbjct: 524 AGE---WRECQGIRGAMRRKGLRKQGGCSWTEVD 554



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 252/485 (51%), Gaps = 11/485 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++A A    L  G ++H  ++K G+ S   + N+L+ MYAKC     A ++FD M E+ 
Sbjct: 10  LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER- 68

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +VV W +++  +   G+  E L LF EM+  G   N +T  A L+AC   +    G++IH
Sbjct: 69  NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQIH 126

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              V++G      VAN+L+ MY++     +A  V   + +++  +WNSM++G+       
Sbjct: 127 GVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGR 186

Query: 244 KAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--VSDLQIGN 300
            ++  FRE+Q    ++PD+    + + A   LG    G ++HA    +G    S+  +  
Sbjct: 187 DSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAG 246

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y KC  +    +VF  +  ++ I WTT+I G+AQ     +A+ LFR     G+ A
Sbjct: 247 ALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRA 306

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRK--GLSDLVILNAIVDVYGKCGNIDYSRNV 418
           D  ++ SV+   +    + Q K++H Y  +   GL D+ + N++VD+Y KCG    +   
Sbjct: 307 DGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL-DVSVANSLVDMYLKCGLTGEAGRR 365

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  + +++VVSWT+MI+    +G   EA++LF  M    VE+D +  ++ LSA S   ++
Sbjct: 366 FREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLV 425

Query: 479 KKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMIN 536
            + +     I + +    +    + +VD+  R G L  A ++   +  +  + +W ++++
Sbjct: 426 DECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLS 485

Query: 537 ANGLH 541
           A  +H
Sbjct: 486 ACRVH 490


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/682 (35%), Positives = 391/682 (57%), Gaps = 15/682 (2%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L+A    S    G+++HAA +K G      + N LI MYA+CGK+  A  V   +  ++ 
Sbjct: 207 LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 266

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           VSW +++ GF+ +    + ++ F E++G+G  P++      + A G  G    G ++H  
Sbjct: 267 VSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGV 324

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            ++ GF     + N+L+ MY+K        RVF  + +++  +W ++I+GYA       +
Sbjct: 325 CVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDS 384

Query: 347 LELFRTVQLEGLD-ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS---DLVILNAI 402
           L +FR +Q    +  D     S+L ACSGL    +  ++H  +  +G+S   + ++  A+
Sbjct: 385 LLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGAL 444

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +DVY KC  +  +  VF+ +E ++ + WT++I  +   G   EA+ LF     + V +D 
Sbjct: 445 LDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADG 504

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
             L S ++  +  +++++GK+++ +  +    L+ SVA+SLVDMY +CG    A + F  
Sbjct: 505 HVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFRE 564

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +  ++++ WT+MIN  G HG G+ AIDLF +M+AE    D + +LALL ACSHSGL++E 
Sbjct: 565 MPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDEC 624

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
           +++   +  D ++ P  EHYAC+VDLLGRA  L EA + + SM +EPT  VW  LL ACR
Sbjct: 625 RRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACR 684

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
           VH +  +G  V   LL +D  NP NYV++SN+ A + +W++ + +R  MR  GL+K  G 
Sbjct: 685 VHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGC 744

Query: 703 SWIEIGNKIHSFI-ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
           SW E+  ++H F    D +H ++ +I + L E+  ++    GY    +  LH+V+EE +V
Sbjct: 745 SWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRV 804

Query: 762 QMLYGHSERLAIAYGVLK--------STEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           + L  HSERLA+   +L+           G ++R+ KNLRVC DCH F K +S +  R +
Sbjct: 805 ESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVV 864

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           VVRDANRFH F+ G CSC DYW
Sbjct: 865 VVRDANRFHRFQNGACSCRDYW 886



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 261/514 (50%), Gaps = 16/514 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++FD + +R V +W A++  ++ +GE    L  +  MR  G S + FT
Sbjct: 244 MYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFT 303

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               +KAC        G +IHG+ ++ G++  D + NSLV MY+K      AR++FD + 
Sbjct: 304 LSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIP 361

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLG 179
            + ++  WNS+IS Y+ +GQ  ++L +FREMQR      + +TF + L+AC        G
Sbjct: 362 SR-NLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREG 420

Query: 180 MEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            ++HAA    G +      +A AL+ +Y +C ++  A  V   LE ++++ W +++ G  
Sbjct: 421 AQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHA 480

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q     +AM  FR    +G + D     + V+       +  GK++H Y  K     D+ 
Sbjct: 481 QEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVS 540

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N+L+DMY KC      GR F +M A++ +SWT +I G  ++    +A++LF  +Q EG
Sbjct: 541 VANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEG 600

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKCGNIDYS 415
           ++AD +   ++L ACS    + + +     I   R+          +VD+ G+ G +  +
Sbjct: 601 VEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREA 660

Query: 416 RNVFESIESKDVVS-WTSMISS-YVHNGLA--NEALELFYLMNEANVESDSITLVSALSA 471
           + +  S+  +  V  W +++S+  VH  +A   E  ++   ++  N   + + L + L+ 
Sbjct: 661 KELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDN-PVNYVMLSNILAE 719

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A      ++ + + G + RKG   +G  + + VD
Sbjct: 720 AGE---WRECQGIRGAMRRKGLRKQGGCSWTEVD 750



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 250/484 (51%), Gaps = 9/484 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++A A    L  G ++H  ++K G+ S   + N+L+ MYAKC     A ++FD M E+ 
Sbjct: 206 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER- 264

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +VV W +++  +   G+  E L LF EM+  G   N +T  A L+AC   +    G++IH
Sbjct: 265 NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQIH 322

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              V++G      VAN+L+ MY++     +A  V   + +++  +WNSM++G+       
Sbjct: 323 GVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGR 382

Query: 244 KAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--VSDLQIGN 300
            ++  FRE+Q    ++PD+    + + A   LG    G ++HA    +G    S+  +  
Sbjct: 383 DSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAG 442

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y KC  +    +VF  +  ++ I WTT+I G+AQ     +A+ LFR     G+ A
Sbjct: 443 ALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRA 502

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D  ++ SV+   +    + Q K++H Y  +     D+ + N++VD+Y KCG    +   F
Sbjct: 503 DGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRF 562

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             + +++VVSWT+MI+    +G   EA++LF  M    VE+D +  ++ LSA S   ++ 
Sbjct: 563 REMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVD 622

Query: 480 KGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINA 537
           + +     I + +    +    + +VD+  R G L  A ++   +  +  + +W ++++A
Sbjct: 623 ECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSA 682

Query: 538 NGLH 541
             +H
Sbjct: 683 CRVH 686


>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
 gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
          Length = 655

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/649 (36%), Positives = 375/649 (57%), Gaps = 10/649 (1%)

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
           Q  + ++ N L+  Y RC  + +A     ++  K+  S+  M+  + +NDL+ KA+Q F+
Sbjct: 13  QEKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFK 72

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGN--LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           +      + +Q   V  + +   LG   L +GKE+H +AI QGF +DL + N+L+ MYAK
Sbjct: 73  KSINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAK 132

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C    +   VF +M  ++ IS+T++I  Y     H++A EL++ +  EG+  D+    + 
Sbjct: 133 CGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAA 192

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
           L  C  ++   + + IH  +        V  NA+V +YG+ G I  ++ VF+ I  KD+ 
Sbjct: 193 LAVCPTIR---EGEAIHVKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLA 249

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           S+ +MI+ +      ++A+ L+  M   N+E +  T  S L A S L  L +GKE++  +
Sbjct: 250 SYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKV 309

Query: 489 IRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
             KG +    VA  ++LV+MYA+CG+   A  VFN    K++  WTS+++A    G+ + 
Sbjct: 310 --KGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQY 367

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
            ++ + +M  E   PD +TF A+  ACSHSGL +EG  +   MR D+ + P   HY C++
Sbjct: 368 RLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMI 427

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           DLLGR   L EA + VR+M   P    W  LL AC+V+ + ++G    K++ EL+P + G
Sbjct: 428 DLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSG 487

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
            Y+L+ N++A + KW DV +V+  ++  GL K PG S IE   +IH F+  D +H  + E
Sbjct: 488 PYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQE 547

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
           I  +L E+ E+L    GY   T+ VL +V EE K ++L  HSER+A+  G+L S  G+ +
Sbjct: 548 IRARLQEVHEQLSH-AGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATL 606

Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            I KNLR+C DCHSF KLVS++  R+++VRD++RFH F+ G CSCGDYW
Sbjct: 607 HIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 227/455 (49%), Gaps = 40/455 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YG+C S+ DA   F +++++  +++  M+GAY  N    + L+ + +     +  +  T+
Sbjct: 27  YGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSINEELQQNQATY 86

Query: 62  PCVIKACAMLKD--LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
             V+K+CA L +  L+ G +IH   +  G+ +   + NSL+ MYAKC  F+ A  +F++M
Sbjct: 87  VTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFEKM 146

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E ++++ + S+I AY+ + + +EA  L+++M   G++ + Y + AAL  C         
Sbjct: 147 -EPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVC--------- 196

Query: 180 MEIHAATVKSGQNLQVYV----------ANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
                 T++ G+ + V +          +NAL+ MY R G++  A  V   +  KD  S+
Sbjct: 197 -----PTIREGEAIHVKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASY 251

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
           N+M+  F + D   KA+  + E++G   +P+     + + A  +LG L  GKE+H     
Sbjct: 252 NNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKG 311

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
               +D+     L++MYAKC   +    VF     ++  +WT++++ Y+Q       LE 
Sbjct: 312 GDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEA 371

Query: 350 FRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAI 402
           ++ +  EG+  D +   ++  ACS       GL      +E H  +  +          +
Sbjct: 372 YQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPH-----YTCM 426

Query: 403 VDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
           +D+ G+ G +  +  +  ++  S DVV+WT ++S+
Sbjct: 427 IDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSA 461



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 227/488 (46%), Gaps = 25/488 (5%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F+ N LV  Y +C     A   F  + EK +   +  ++ AY  +    +AL LF++   
Sbjct: 18  FLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYS-YAIMMGAYQENDLHKKALQLFKKSIN 76

Query: 154 VGLVTNAYTFVAALQACEDSSFETL--GMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
             L  N  T+V  L++C     + L  G EIH   +  G    + V N+LI MYA+CG  
Sbjct: 77  EELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSF 136

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             AAGV  ++E K+ +S+ SM+  +     + +A + ++++   G  PD      A++  
Sbjct: 137 KFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVC 196

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
                +  G+ +H         + +   N L+ MY +   +     VF  +  +D  S+ 
Sbjct: 197 ---PTIREGEAIHVKLGNHERRTPV-CSNALVGMYGRFGRIASAKWVFDGIRYKDLASYN 252

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
            +IA +A+ +   KA+ L+  ++   L+ ++    SVL ACS L  +++ KEIH  +  K
Sbjct: 253 NMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKV--K 310

Query: 392 G---LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           G    +D+    A+V++Y KCG+   +R VF     K+V +WTS++S+Y   G +   LE
Sbjct: 311 GGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLE 370

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA------SS 502
            +  MN   V  D +T  +  +A S       G    G +  +    +  +       + 
Sbjct: 371 AYQRMNCEGVIPDDVTFTAIFNACS-----HSGLPDEGLLYFRAMREDHWIVPLQPHYTC 425

Query: 503 LVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           ++D+  R G L  A ++   +  + D++ WT +++A  ++G  K+     YK   E   P
Sbjct: 426 MIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARA-YKRITELNPP 484

Query: 562 DHITFLAL 569
           D   +L +
Sbjct: 485 DSGPYLLM 492



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 180/409 (44%), Gaps = 34/409 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS   A  +F+K+  + + ++ +M+ AY    + +   E Y +M   GI  D + 
Sbjct: 129 MYAKCGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYA 188

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +   +  C  +++   G  IH + L      T    N+LV MY +      A+ +FD + 
Sbjct: 189 YAAALAVCPTIRE---GEAIH-VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIR 244

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+  +N++I+ ++      +A+ L+ EM+   L  N +TF + L AC      T G 
Sbjct: 245 YK-DLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGK 303

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH       Q   V    AL+ MYA+CG   EA  V      K+  +W S+++ + Q  
Sbjct: 304 EIHKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPG 363

Query: 241 LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQG-FVSDL 296
                ++ ++ +   G  PD V      NA S SG    L +   L+  A+++  ++  L
Sbjct: 364 QSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSG----LPDEGLLYFRAMREDHWIVPL 419

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQ----------DFISWTTIIAG-YAQNNCHLK 345
           Q   T        C ++ +GRV     A+          D ++WT +++      +  + 
Sbjct: 420 QPHYT--------CMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIG 471

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           A    R  +L   D+   ++   + A +G    +   E+   I ++GL+
Sbjct: 472 ARAYKRITELNPPDSGPYLLMGNMYAKAGK--WADVAEVKKMIKQRGLA 518


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 222/557 (39%), Positives = 341/557 (61%), Gaps = 3/557 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GK+LHA     G   +  +   L+ +YA    +     +F ++  Q+   W  +I GYA 
Sbjct: 66  GKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAW 125

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
           N  H  A+ L+  +   GL  D   +  VL ACS L  + + + IH Y+I+ G   DL +
Sbjct: 126 NGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFV 185

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
             A++D+Y KCG +  +  VF+ I  +D V W SM+++Y  NG  +E++ L   M    V
Sbjct: 186 GAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGV 245

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
                TLV+ +S+++ ++ L  G+E++GF  R GF     V ++L+DMYA+CG++ +A  
Sbjct: 246 RPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALA 305

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           +F  ++ K ++ W ++I    +HG    A+DLF KM  E   PDHITF+ +L ACS   L
Sbjct: 306 LFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRL 364

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           ++EG+    +M  DY + P  +HY C++DLLG    L+EAY  +R+M ++P + VW ALL
Sbjct: 365 LDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALL 424

Query: 639 GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
            +C++H N EL E+  +KL+EL+P + GNYV+++N++A S KW+ VE++R  M    +KK
Sbjct: 425 NSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKK 484

Query: 699 TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
               SWIE+ NK+++F+A D SHS SD IY +L  + E L  E GY   T  V H+VEE+
Sbjct: 485 NIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRL-EGLMHEAGYAPDTGSVFHDVEED 543

Query: 759 EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
           EK  M+  HSERLAIA+G++ ++ G+ + ITKNLR+C DCH   K +S++  RE+ VRD 
Sbjct: 544 EKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDV 603

Query: 819 NRFHHFEAGVCSCGDYW 835
           NR+H F+ G+CSCGD+W
Sbjct: 604 NRYHSFKHGMCSCGDHW 620



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 215/421 (51%), Gaps = 5/421 (1%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           T  Y + + LQ+C DS     G ++HA     G      +A  L+ +YA    +  A  +
Sbjct: 45  TTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNL 104

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
             ++  ++   WN ++ G+  N  +  A+  + ++   G +PD       + A   L  +
Sbjct: 105 FDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAI 164

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+ +H Y IK G+  DL +G  L+DMYAKC CV   GRVF ++  +D + W +++A Y
Sbjct: 165 GEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAY 224

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
           AQN    +++ L R +   G+      + +V+ + + + C+   +EIHG+  R G  S+ 
Sbjct: 225 AQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSND 284

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            +  A++D+Y KCG++  +  +FE +  K VVSW ++I+ Y  +GLA  AL+LF  M + 
Sbjct: 285 KVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKE 344

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDI 515
           +   D IT V  L+A S   +L +G+ L   ++R  G        + ++D+   CG LD 
Sbjct: 345 D-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDE 403

Query: 516 ANKVFNCVQTK-DLILWTSMINANGLHGRGKVA-IDLFYKMEAESFAPDHITFLALLYAC 573
           A  +   +  K D  +W +++N+  +HG  ++A + L   +E E     +   LA +YA 
Sbjct: 404 AYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQ 463

Query: 574 S 574
           S
Sbjct: 464 S 464



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 210/408 (51%), Gaps = 16/408 (3%)

Query: 55  SVDAFT--------FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC 106
           SVD+F         +  ++++C   K L+ G ++H      G      +   LV +YA  
Sbjct: 36  SVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVS 95

Query: 107 YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
                AR LFD++  K+++ LWN +I  Y+ +G    A+ L+ +M   GL  + +T    
Sbjct: 96  NSLLNARNLFDKI-PKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFV 154

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L+AC   S    G  IH   +KSG    ++V  ALI MYA+CG + +A  V  ++  +D+
Sbjct: 155 LKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDA 214

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           V WNSML  + QN    +++   RE+   G +P +   V  +S+S  +  L  G+E+H +
Sbjct: 215 VLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGF 274

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
             + GF S+ ++   L+DMYAKC  V     +F ++  +  +SW  II GYA +   + A
Sbjct: 275 GWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGA 334

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVI-LNAIVD 404
           L+LF  ++ E     +  +G VL ACS  + + + + ++  ++R  G++  V     ++D
Sbjct: 335 LDLFDKMRKEDRPDHITFVG-VLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMID 393

Query: 405 VYGKCGNIDYSRNVFESIESK-DVVSWTSMISSYVHNG---LANEALE 448
           + G CG +D + ++  ++  K D   W ++++S   +G   LA  ALE
Sbjct: 394 LLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALE 441



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 192/378 (50%), Gaps = 7/378 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y    S+L+A  LFDK+ ++ +F WN ++  Y  NG     +  Y +M   G+  D FT
Sbjct: 91  LYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFT 150

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            P V+KAC+ L  +  G  IH  V+K G++   F+  +L+ MYAKC     A ++FD++ 
Sbjct: 151 LPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIV 210

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D VLWNS+++AY+ +G   E++ L REM   G+     T V  + +  D +    G 
Sbjct: 211 VR-DAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGR 269

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH    + G      V  ALI MYA+CG +  A  +  +L  K  VSWN+++TG+  + 
Sbjct: 270 EIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHG 329

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQ-GFVSDLQI 298
           L   A+  F +++    +PD +  V  ++A  R G LL+ G+ L+   ++  G    +Q 
Sbjct: 330 LAVGALDLFDKMRKE-DRPDHITFVGVLAACSR-GRLLDEGRALYNLMVRDYGITPTVQH 387

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALELFRTVQLE 356
              ++D+   C  ++    +   M+ + D   W  ++       N  L  L L + ++LE
Sbjct: 388 YTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELE 447

Query: 357 GLDADVMIIGSVLMACSG 374
             D+   +I + + A SG
Sbjct: 448 PDDSGNYVILANMYAQSG 465



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 4/164 (2%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L  GK+L+      G      +A+ LV +YA   +L  A  +F+ +  ++L LW  +I  
Sbjct: 63  LNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRG 122

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLD 596
              +G    AI L++KM      PD+ T   +L ACS    I EG+   E +++  ++ D
Sbjct: 123 YAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERD 182

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            +    A L+D+  +   + +A +    + +   A +W ++L A
Sbjct: 183 LFVG--AALIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSMLAA 223


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/638 (37%), Positives = 375/638 (58%), Gaps = 18/638 (2%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           NA+++ YA+ G + EA  +  ++  K+S+SWN ML  +VQN     A + F E +   + 
Sbjct: 65  NAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF-ESKADWEL 123

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
               C +       RL   ++ + +     ++  VS     NT++  YA+   +    R+
Sbjct: 124 ISWNCMMGGYVKRNRL---VDARGIFDRMPERDEVS----WNTMISGYAQNGELLEAQRL 176

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV-QLEGLDADVMIIGSVLMACSGLKC 377
           F +   +D  +WT +++GY QN    +A  +F  + +   +  + +I G V   C   K 
Sbjct: 177 FEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYV--QC---KR 231

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
           M Q +E+   +  + +S     N ++  Y + G+I  +RN F+ +  +D +SW ++I+ Y
Sbjct: 232 MDQARELFEAMPCQNVSSW---NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGY 288

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             +G   EAL LF  M       +  T  S LS  + ++ L+ GK+++G +++ G     
Sbjct: 289 AQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGC 348

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            V ++L+ MY +CG +D A  VF  ++ K+++ W +MI     HG GK A+ LF  M+  
Sbjct: 349 YVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKT 408

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              PD +T + +L ACSH+GL+++G ++   M  DY +    +HY C++DLLGRA  L++
Sbjct: 409 GILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDD 468

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           A   +++M  EP A  W ALLGA R+H N ELGE  AK + E++P N G YVL+SN++AA
Sbjct: 469 AQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAA 528

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           S +W DV ++R+RMR  G+KK PG SW+E+ NKIH+F   D  H E D IY  L E+  K
Sbjct: 529 SGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLK 588

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVD 797
           +++E GYV+ T+ VLH+VEEEEKV ML  HSE+LA+A+G+L    G  IR+ KNLRVC D
Sbjct: 589 MKKE-GYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCED 647

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CH+  K +S++ GR +++RD++RFHHF  G CSCGDYW
Sbjct: 648 CHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 243/499 (48%), Gaps = 46/499 (9%)

Query: 108 DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
           + R AR LFD+M E+ DVV WN+++S Y+ +G   EA  +F EM       N+ ++   L
Sbjct: 45  NLRAARLLFDQMPER-DVVSWNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNGML 99

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
            A      +   +E      +S  + ++   N ++  Y +  ++ +A G+  ++  +D V
Sbjct: 100 AA----YVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEV 155

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRE---------------------LQGAGQKPDQVCTVN 266
           SWN+M++G+ QN    +A + F E                     L  A +  D +   N
Sbjct: 156 SWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKN 215

Query: 267 AVSASGRLGNLLNGKEL-HAYAIKQGFV-SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           +VS +  +   +  K +  A  + +     ++   NT++  YA+   +      F +M  
Sbjct: 216 SVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQ 275

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D ISW  IIAGYAQ+    +AL LF  ++ +G   +     S L  C+ +  +   K++
Sbjct: 276 RDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQV 335

Query: 385 HGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           HG +++ GL S   + NA++ +Y KCGNID +  VFE IE K+VVSW +MI+ Y  +G  
Sbjct: 336 HGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFG 395

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSVASS 502
            EAL LF  M +  +  D +T+V  LSA S   ++ KG E    + +  G        + 
Sbjct: 396 KEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTC 455

Query: 503 LVDMYARCGALDIA-NKVFNCVQTKDLILWTSMINANGLHGR---GKVAIDLFYKMEAES 558
           ++D+  R G LD A N + N     D   W +++ A+ +HG    G+ A  + ++ME   
Sbjct: 456 MIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEME--- 512

Query: 559 FAPDH---ITFLALLYACS 574
             PD+      L+ LYA S
Sbjct: 513 --PDNSGMYVLLSNLYAAS 529



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 229/508 (45%), Gaps = 72/508 (14%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC--VIKAC 68
           A  LFD++ +R V +WNAML  Y  NG      E +  M            PC   I   
Sbjct: 49  ARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------------PCKNSISWN 96

Query: 69  AMLKDLDCGAKIHGL--VLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVV 126
            ML       +I     + +   D      N ++  Y K      AR +FDRM E+ D V
Sbjct: 97  GMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER-DEV 155

Query: 127 LWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
            WN++IS Y+ +G+ LEA  LF E      V + +T+ A +     S +   GM   A  
Sbjct: 156 SWNTMISGYAQNGELLEAQRLFEE----SPVRDVFTWTAMV-----SGYVQNGMLDEARR 206

Query: 187 VKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
           V  G   +  V+ NA+IA Y +C +M +A  +   +  ++  SWN+M+TG+ QN    +A
Sbjct: 207 VFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQA 266

Query: 246 MQFFR-------------------------------ELQGAGQKPDQVCTVNAVSASGRL 274
             FF                                E++  G++ ++    + +S    +
Sbjct: 267 RNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEI 326

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
             L  GK++H   +K G  S   +GN L+ MY KC  ++    VF  +  ++ +SW T+I
Sbjct: 327 AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMI 386

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           AGYA++    +AL LF +++  G+  D + +  VL ACS    + +  E   Y       
Sbjct: 387 AGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTE---YFYSMTQD 443

Query: 395 DLVILNA-----IVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMI-SSYVHNG--LANE 445
             +  N+     ++D+ G+ G +D ++N+ +++    D  +W +++ +S +H    L  +
Sbjct: 444 YGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEK 503

Query: 446 ALELFYLMNEANVESDSITLVSALSAAS 473
           A ++ + M   N  S    L+S L AAS
Sbjct: 504 AAKMIFEMEPDN--SGMYVLLSNLYAAS 529



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 188/377 (49%), Gaps = 14/377 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +L+A++LF++   R VFTW AM+  YV NG    +L+   R+       ++ ++
Sbjct: 164 YAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNG----MLDEARRVFDGMPEKNSVSW 219

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             +I      K +D   ++    + C   S+    N+++  YA+  D  +AR  FDRM +
Sbjct: 220 NAIIAGYVQCKRMDQARELFE-AMPCQNVSS---WNTMITGYAQNGDIAQARNFFDRMPQ 275

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D + W +II+ Y+ SG   EAL LF EM+R G   N  TF + L  C + +   LG +
Sbjct: 276 R-DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQ 334

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   VK+G     YV NAL+ MY +CG + +A  V   +E K+ VSWN+M+ G+ ++  
Sbjct: 335 VHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGF 394

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GFVSDLQIG 299
             +A+  F  ++  G  PD V  V  +SA    G +  G E + Y++ Q  G  ++ +  
Sbjct: 395 GKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTE-YFYSMTQDYGITANSKHY 453

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQLEG 357
             ++D+  +   ++    +   M  + D  +W  ++ A     N  L         ++E 
Sbjct: 454 TCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEP 513

Query: 358 LDADVMIIGSVLMACSG 374
            ++ + ++ S L A SG
Sbjct: 514 DNSGMYVLLSNLYAASG 530



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 12/179 (6%)

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
           N+  +R +F+ +  +DVVSW +M+S Y  NG   EA E+F  M   N    SI+    L+
Sbjct: 45  NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN----SISWNGMLA 100

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           A      ++  + L         + E    + ++  Y +   L  A  +F+ +  +D + 
Sbjct: 101 AYVQNGRIEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVS 156

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           W +MI+    +G    A  LF     ES   D  T+ A++     +G+++E ++  + M
Sbjct: 157 WNTMISGYAQNGELLEAQRLF----EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM 211



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 1/140 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++ DA  +F+ + ++ V +WN M+  Y  +G     L  +  M+  GI  D  T
Sbjct: 357 MYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVT 416

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    +D G +  + +    G  +       ++ +  +      A+ L   M
Sbjct: 417 MVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNM 476

Query: 120 GEKEDVVLWNSIISAYSASG 139
             + D   W +++ A    G
Sbjct: 477 PFEPDAATWGALLGASRIHG 496


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/693 (34%), Positives = 388/693 (55%), Gaps = 17/693 (2%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M+  G+  +  ++    +AC        G   H    ++ +N   ++ N+++ MY +CG 
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           + +A  V  ++  ++ VSWN++++ + +N ++ K    F  +     KP      N  + 
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKP------NGSTY 114

Query: 271 SGRLGNLLN------GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
            G L +LLN      GK++H++AI+ G  S+  +   + +MY KC  +     VF +M+ 
Sbjct: 115 IGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSE 174

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           ++ ++WT I+ GY Q    + AL LF  +  EG++ D  +   VL AC+GL+ ++  ++I
Sbjct: 175 KNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQI 234

Query: 385 HGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           HG+I++ GL S++ +   +VD Y KC N++ +   FE I   + VSW+++I+ Y   G  
Sbjct: 235 HGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEF 294

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
            EAL+ F  +   +V+ +S T  S   A S+L+    G + +   I+          S++
Sbjct: 295 EEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAM 354

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           + MY+RCG LD A +VF  +   D + WT++I      G    A+ LF +M+     P+ 
Sbjct: 355 ITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNA 414

Query: 564 ITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
           +TF+A+L ACSHSGL+ EG+++LE M  +Y +    +HY C+VD+  RA  L+EA + +R
Sbjct: 415 VTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIR 474

Query: 624 SMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKD 683
           SM   P A  W  LLG C  + N E+GE+ A+ L +LDP +   Y+L+ N++A+  KWK+
Sbjct: 475 SMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKE 534

Query: 684 VEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK-LEREG 742
              VR  M    L+K    SWI +  K+H FI  DK H +++EIY KL  + +  ++ E 
Sbjct: 535 AANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEET 594

Query: 743 GYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFC 802
           G + +    + N   E K Q+L  HSERLA+A+G++ +   + + + KNLR C DCH F 
Sbjct: 595 GLLTEED--VSNSLPERKEQLLV-HSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFG 651

Query: 803 KLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           K VS + GRE+VVRD+ RFHHF+ G CSC DYW
Sbjct: 652 KQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 266/521 (51%), Gaps = 13/521 (2%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M   GISV   ++ C+ +AC  +K L  G   H  + +   +  +F+ NS++ MY KC  
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              AR++FD M E+ ++V WN+IISAY+ +G   +   +F  M  +    N  T++  L+
Sbjct: 61  LADARKVFDEMRER-NLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLR 119

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           +  + S   +G +IH+  ++SG      V  A+  MY +CG +  A  V  ++  K++V+
Sbjct: 120 SLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVA 179

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           W  ++ G+ Q +    A+  F ++   G + D+      + A   L  L  G+++H + +
Sbjct: 180 WTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIV 239

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K G  S++ +G  L+D Y KC  +    + F  ++  + +SW+ +I GY Q     +AL+
Sbjct: 240 KLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALK 299

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL----NAIVD 404
            F +++   +D +     S+  ACS L   +   + H   I+   S LV      +A++ 
Sbjct: 300 TFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIK---SSLVAYQHGESAMIT 356

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
           +Y +CG +DY+  VFESI+  D V+WT++I+ Y + G A EAL+LF  M +  V  +++T
Sbjct: 357 MYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVT 416

Query: 465 LVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
            ++ L+A S   ++ +G++ L       G          +VD+Y+R G L  A ++   +
Sbjct: 417 FIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSM 476

Query: 524 Q-TKDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFA 560
             + D + W  ++     +     G++A +  ++++ E  A
Sbjct: 477 PFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTA 517



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 216/437 (49%), Gaps = 4/437 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA ++FD++ +R + +WN ++ AY  NG   +    +S M  L    +  T
Sbjct: 54  MYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGST 113

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +   +++      L+ G +IH   ++ G  S   +  ++  MY KC     A  +F++M 
Sbjct: 114 YIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMS 173

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK + V W  I+  Y+ + + ++AL LF +M   G+  + Y F   L+AC        G 
Sbjct: 174 EK-NAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGR 232

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   VK G   +V V   L+  Y +C  +  A      +   + VSW++++TG+ Q  
Sbjct: 233 QIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMG 292

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +A++ F  L+      +     +   A   L +  +G + HA AIK   V+     +
Sbjct: 293 EFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGES 352

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++ MY++C  ++Y  RVF  +   D ++WT IIAGYA      +AL+LFR +Q  G+  
Sbjct: 353 AMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRP 412

Query: 361 DVMIIGSVLMACSGLKCMSQTKE-IHGYIIRKGLSDLVI-LNAIVDVYGKCGNIDYSRNV 418
           + +   +VL ACS    + + ++ +       G++  +   + +VD+Y + G +  +  +
Sbjct: 413 NAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALEL 472

Query: 419 FESIE-SKDVVSWTSMI 434
             S+  S D +SW  ++
Sbjct: 473 IRSMPFSPDAMSWKCLL 489



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 191/377 (50%), Gaps = 4/377 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  AE +F+K+S++    W  ++  Y      +  L  +++M   G+ +D + 
Sbjct: 155 MYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYV 214

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+KACA L++L+ G +IHG ++K G +S   +   LV  Y KC +   A + F+ + 
Sbjct: 215 FSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWIS 274

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  DV  W+++I+ Y   G+  EAL  F  ++   +  N++T+ +  QAC   +    G 
Sbjct: 275 EPNDVS-WSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGA 333

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + HA  +KS      +  +A+I MY+RCG++  A  V   +++ D+V+W +++ G+    
Sbjct: 334 QAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQG 393

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIG 299
              +A++ FR +Q  G +P+ V  +  ++A    G ++ G++ L + +   G  + +   
Sbjct: 394 NAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHY 453

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAG-YAQNNCHLKALELFRTVQLEG 357
           + ++D+Y++   +     +   M  + D +SW  ++ G +   N  +  L      QL+ 
Sbjct: 454 DCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDP 513

Query: 358 LDADVMIIGSVLMACSG 374
            D    I+   L A  G
Sbjct: 514 EDTAGYILMFNLYASFG 530


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/599 (38%), Positives = 370/599 (61%), Gaps = 9/599 (1%)

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q DL+ +AM+    ++  G   D +     +      G +  GK +H +   +G+   + 
Sbjct: 33  QWDLH-RAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMF 91

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + NTL++MY K   +     +F +M  ++ +SWTT+I+ Y+ N  + KAL+    +  EG
Sbjct: 92  VVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREG 150

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +  ++    SVL AC GL  + Q   +H  II+ GL SD+ + +A++DVY K  ++D + 
Sbjct: 151 VRPNMFTYSSVLRACDGLPNLRQ---LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNAL 207

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF+ + ++D+V W S+I  +  N   NEAL LF  M  A   +D  TL S L A + L+
Sbjct: 208 GVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLA 267

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           +L+ G++++  +++  F+ +  + ++L+DMY +CG+L+ AN  F+ +  KD+I W++M+ 
Sbjct: 268 LLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVA 325

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
               +G  + A++LF  M+     P++IT L +L+ACSH+GL+ +G  +   M+  + +D
Sbjct: 326 GLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVD 385

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHY CL+DLLGRA  L+EA + +  M+ EP +  W  LLGACRVH N +L    AKK
Sbjct: 386 PGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKK 445

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           ++EL+P + G Y+L+SN++A +++W+DV +VR  M   G++KTPG SWIE+  +IH FI 
Sbjct: 446 IIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFIL 505

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D SH + +EI ++L ++ E++    GYV  T FVL ++E E+K   L  HSE+LAI +G
Sbjct: 506 GDTSHPKIEEIVQRLNDLIERV-MGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFG 564

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++  +    +RI KNLR+C DCH F K+VSR+  R +V+RD  R+HHF+ GVCSCGDYW
Sbjct: 565 LMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 217/428 (50%), Gaps = 38/428 (8%)

Query: 33  YVSNGEPL--------------RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
           YV++  PL              R +     M   G+  DA T+  +IK C+    +  G 
Sbjct: 16  YVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGK 75

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS-- 136
           ++H  +   GY+   F+VN+L+ MY K     +A  LFD M E+ +VV W ++ISAYS  
Sbjct: 76  RVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPER-NVVSWTTMISAYSNK 134

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            + + L+ L L   M R G+  N +T+ + L+AC+      L  ++H   +K+G    V+
Sbjct: 135 LNDKALKCLIL---MFREGVRPNMFTYSSVLRACD--GLPNL-RQLHCGIIKTGLESDVF 188

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V +ALI +Y++   +  A GV  ++  +D V WNS++ GF QN    +A+  F+ ++ AG
Sbjct: 189 VRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAG 248

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
              DQ    + + A   L  L  G+++H + +K  F  DL + N L+DMY KC  +    
Sbjct: 249 FLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDAN 306

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
             F +M  +D ISW+T++AG AQN    +ALELF +++  G   + + +  VL ACS   
Sbjct: 307 SAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAG 366

Query: 377 CMSQTKEIHGYIIRKGLSDLVILNA-------IVDVYGKCGNIDYSRNVFESIE-SKDVV 428
            + +     G+   + +  L  ++        ++D+ G+ G +D +  +   +E   D V
Sbjct: 367 LVEK-----GWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSV 421

Query: 429 SWTSMISS 436
           +W +++ +
Sbjct: 422 TWRTLLGA 429



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 197/375 (52%), Gaps = 12/375 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   + +AE LFD++ +R V +W  M+ AY SN    + L+    M   G+  + FT
Sbjct: 99  MYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMFT 157

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V++AC  L +L    ++H  ++K G +S  F+ ++L+ +Y+K  D   A  +FD M 
Sbjct: 158 YSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMP 214

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+V+WNSII  ++ +    EAL LF+ M+R G + +  T  + L+AC   +   LG 
Sbjct: 215 TR-DLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGR 273

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +K  Q+L   + NALI MY +CG + +A     ++  KD +SW++M+ G  QN 
Sbjct: 274 QVHVHVLKFDQDL--ILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNG 331

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL--QI 298
              +A++ F  ++ +G +P+ +  +  + A    G L+     +  ++K+ F  D   + 
Sbjct: 332 YSRQALELFESMKESGSRPNYITVLGVLFACSHAG-LVEKGWYYFRSMKKLFGVDPGREH 390

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQLE 356
              L+D+  +   ++   ++ ++M  + D ++W T++ A     N  L      + ++LE
Sbjct: 391 YGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELE 450

Query: 357 GLDADVMIIGSVLMA 371
             DA   I+ S + A
Sbjct: 451 PEDAGTYILLSNIYA 465



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 104/210 (49%), Gaps = 14/210 (6%)

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           +++ H    + A+     M    V +D+IT    +   S+   +++GK ++  I  KG+ 
Sbjct: 28  ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA--NGLHGRGKVAIDLFY 552
            +  V ++L++MY +   L+ A  +F+ +  ++++ WT+MI+A  N L+ +    + L +
Sbjct: 88  PKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMF 147

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           +   E   P+  T+ ++L AC   GL N  +    I++   + D +    + L+D+  + 
Sbjct: 148 R---EGVRPNMFTYSSVLRAC--DGLPNLRQLHCGIIKTGLESDVFVR--SALIDVYSKW 200

Query: 613 NHLEEAYQFVRSMQIEPTAE--VWCALLGA 640
           + L+ A      M   PT +  VW +++G 
Sbjct: 201 SDLDNALGVFDEM---PTRDLVVWNSIIGG 227


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/606 (37%), Positives = 361/606 (59%), Gaps = 3/606 (0%)

Query: 232 MLTGFVQNDLYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           M++GFV+N  +  +++ F ++  G G + D    +  + A   L  L  G ++   AIK 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           GF S + +   L+ +++KC  V     +F ++  +D IS   +I+G+  N     ++ LF
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKC 409
           + +   G       I  ++   S          IHG+ ++ G+ S   +  A+  VY + 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
             + ++R +F+    K + SW +MIS    NGL + A+ LF  M + NV  + +T+ S L
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
           SA + +  L  G+ ++  I    F     V+++L+DMYA+CG++ +A ++F+ +  K+ +
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEV 300

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            W +MI+  GLHG G+ A+ LFY M + S  P  +TFL++LYACSH+GL+ EG      M
Sbjct: 301 TWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
             D+  +P  EHYAC+VD+LGRA  L++A +F+++M +EP   VW ALLGAC +H +  L
Sbjct: 361 VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNL 420

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
             + ++KL ELDP N G YVL+SN+++  RK+     VR   +   L KTPG + IEIG 
Sbjct: 421 AHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQ 480

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
             H F + D+SH +S  IY +L ++T K+  E G+  +T  VLH++EEEEK   +  HSE
Sbjct: 481 VPHVFTSGDQSHPQSKAIYAELDKLTGKM-TEAGFQTETTTVLHDLEEEEKELTMKVHSE 539

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           +LAIA+G++ +  G+ IRI KNLRVC+DCH++ K +S++  R +VVRDANRFHHF+ G+C
Sbjct: 540 KLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLC 599

Query: 830 SCGDYW 835
           SCGDYW
Sbjct: 600 SCGDYW 605



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 200/415 (48%), Gaps = 13/415 (3%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G   D  T   V+ A A L++L  G +I  L +KCG+ S   ++  L+++++KC +   A
Sbjct: 26  GPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIA 85

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           R LF  +  K+D++  N++IS ++ +G+  +++ LF+E+   G   ++ T V  +     
Sbjct: 86  RLLFGEI-RKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSP 144

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
                L   IH   VK G      V+ AL  +Y R  +M  A  +  +   K   SWN+M
Sbjct: 145 FGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAM 204

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           ++G  QN L   A+  F+ +Q     P+ V   + +SA  ++G L  G+ +H+      F
Sbjct: 205 ISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRF 264

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            S++ +   L+DMYAKC  +     +F  M  ++ ++W  +I+GY  +    +AL+LF  
Sbjct: 265 ESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYD 324

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEI-HGYIIRKGLSDLVILNA-IVDVYGKCG 410
           +    +    +   SVL ACS    + +   I H  +   G   L    A +VD+ G+ G
Sbjct: 325 MLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAG 384

Query: 411 NIDYSRNVFESIESKDVVS----WTSMISS-YVH--NGLANEALELFYLMNEANV 458
            +   +   E I++  V      W +++ +  +H    LA+ A E  + ++  N+
Sbjct: 385 QL---KKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENI 436



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 156/337 (46%), Gaps = 11/337 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++ KCG V  A  LF ++ ++ + + NAM+  +  NGE    +  +  +   G  V + T
Sbjct: 75  LFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSST 134

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I   +          IHG  +K G  S   +  +L  +Y +  +   ARQLFD   
Sbjct: 135 IVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESA 194

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK  +  WN++IS  + +G    A+ LF+ MQ+  +  N  T  + L AC      +LG 
Sbjct: 195 EK-TLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGE 253

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H+    +     VYV+ ALI MYA+CG +T A  +   +  K+ V+WN+M++G+  + 
Sbjct: 254 WVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHG 313

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-HAYAIKQGFVSDLQIG 299
              +A++ F ++  +  KP  +  ++ + A    G +  G  + H      GF       
Sbjct: 314 HGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGF------- 366

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
             L + YA  C V+ +GR      A +FI    +  G
Sbjct: 367 EPLAEHYA--CMVDILGRAGQLKKALEFIKAMPVEPG 401


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/674 (34%), Positives = 380/674 (56%), Gaps = 79/674 (11%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           T+ + LQ C D      G  IH+    +   +   + + L+ MY  CG + E   +  ++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
            N+    WN ++ G+ +   + +++  F                               K
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLF-------------------------------K 191

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
            +    I++                     V    ++F ++  +D ISW ++I+GY  N 
Sbjct: 192 RMRELGIRR---------------------VESARKLFDELGDRDVISWNSMISGYVSNG 230

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA 401
              K L+LF  + L G++ D+  + SV                          +L + N 
Sbjct: 231 LSEKGLDLFEQMLLLGINTDLATMVSV--------------------------ELTLNNC 264

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           ++D+Y K GN++ +  VFE++  + VVSWTSMI+ Y   GL++ ++ LF+ M + ++  +
Sbjct: 265 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPN 324

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
           SIT+   L A +SL+ L++G+E++G I+R GF+L+  VA++LVDMY +CGAL +A  +F+
Sbjct: 325 SITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFD 384

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  KDL+ WT MI   G+HG G  AI  F +M      PD ++F+++LYACSHSGL++E
Sbjct: 385 MIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDE 444

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G  F  +MR +  ++P  EHYAC+VDLL RA +L +AY+F++ M IEP A +W ALL  C
Sbjct: 445 GWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGC 504

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           R++ + +L E VA+ + EL+P N G YVL++N++A + KW++V+++R R+   GL+K PG
Sbjct: 505 RIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPG 564

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            SWIEI  K+H F+  D SH  +++I   L +   +++ EG +  + ++ L   ++ EK 
Sbjct: 565 CSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHF-PKMRYALIKADDTEKE 623

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             L GHSE++A+A+G+L    G  +R+TKNLRVC DCH   K +S++  R++++RD+NRF
Sbjct: 624 MALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRF 683

Query: 822 HHFEAGVCSCGDYW 835
           HHF+ G CSC  +W
Sbjct: 684 HHFKDGSCSCRGHW 697



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 166/336 (49%), Gaps = 23/336 (6%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+  V++ CA LK +  G +IH ++     +    + + LV MY  C D R+ R++FD++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL--VTNAYTFVAALQACEDSSFET 177
              E V LWN +++ Y+  G   E+L LF+ M+ +G+  V +A      L   +  S+ +
Sbjct: 163 A-NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNS 221

Query: 178 L------------GMEIHAATVKSGQN--------LQVYVANALIAMYARCGKMTEAAGV 217
           +            G+++    +  G N        +++ + N L+ MY++ G +  A  V
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQV 281

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
              +  +  VSW SM+ G+ +  L   +++ F E++     P+ +     + A   L  L
Sbjct: 282 FETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAAL 341

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+E+H + ++ GF  D  + N L+DMY KC  +     +F  +  +D +SWT +IAGY
Sbjct: 342 ERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGY 401

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
             +    +A+  F  ++  G++ D +   S+L ACS
Sbjct: 402 GMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 437



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 137/273 (50%), Gaps = 28/273 (10%)

Query: 8   VLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKA 67
           V  A +LFD++  R V +WN+M+  YVSNG   + L+ + +M +LGI+ D  T   V   
Sbjct: 201 VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV--- 257

Query: 68  CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVL 127
                          L L           N L+ MY+K  +   A Q+F+ MGE+  VV 
Sbjct: 258 --------------ELTLN----------NCLLDMYSKSGNLNSAIQVFETMGER-SVVS 292

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           W S+I+ Y+  G    ++ LF EM++  L  N+ T    L AC   +    G EIH   +
Sbjct: 293 WTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHIL 352

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
           ++G +L  +VANAL+ MY +CG +  A  +   +  KD VSW  M+ G+  +    +A+ 
Sbjct: 353 RNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIA 412

Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
            F E++ +G +PD+V  ++ + A    G L  G
Sbjct: 413 AFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 445



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 13/242 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G++  A Q+F+ + +R+V +W +M+  Y   G     +  +  M    +  ++ T
Sbjct: 268 MYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSIT 327

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             C++ ACA L  L+ G +IHG +L+ G+     + N+LV MY KC     AR LFD + 
Sbjct: 328 MACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP 387

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG- 179
           EK D+V W  +I+ Y   G   EA+  F EM+  G+  +  +F++ L AC  S     G 
Sbjct: 388 EK-DLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGW 446

Query: 180 -----MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
                M  +       ++        ++ + AR G +++A   +  +    D+  W ++L
Sbjct: 447 GFFNMMRNNCCIEPKSEHYA-----CIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 501

Query: 234 TG 235
            G
Sbjct: 502 CG 503



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 5/170 (2%)

Query: 385 HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           +G+I  +  S   ++++  ++Y  C  I  S    E+I+ K +  +   I  +   G   
Sbjct: 29  NGFIFFRPSSKTPLVSS--NLYHSCATIGTSVLPSETIDCK-ITDYNIEICRFCELGNLR 85

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
            A+EL     + ++E    T  S L   + L  ++ G+ ++  I      ++G + S LV
Sbjct: 86  RAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLV 143

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            MY  CG L    ++F+ V  + + LW  ++N     G  + ++ LF +M
Sbjct: 144 FMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRM 193


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 219/558 (39%), Positives = 358/558 (64%), Gaps = 4/558 (0%)

Query: 281 KELHAYAIKQGF-VSDLQIGNTLM-DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           K++HA++I+ G  +++  +G  L+  + +    ++Y   VF  +   +  +W TII GYA
Sbjct: 35  KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYA 94

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
           +++    A   +R + +  ++ D      +L A S    + + + IH   IR G   LV 
Sbjct: 95  ESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVF 154

Query: 399 L-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           + N+++ +Y  CG+ + +  VFE ++ +D+V+W SMI+ +  NG  NEAL LF  M+   
Sbjct: 155 VQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEG 214

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           VE D  T+VS LSA++ L  L+ G+ ++ ++++ G +    V +SL+D+YA+CGA+  A 
Sbjct: 215 VEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQ 274

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           +VF+ +  ++ + WTS+I    ++G G+ A++LF +ME +   P  ITF+ +LYACSH G
Sbjct: 275 RVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCG 334

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           +++EG ++   M+ +  + P  EHY C+VDLL RA  +++AY+++++M ++P A +W  L
Sbjct: 335 MLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 394

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           LGAC +H +  LGEI    LL L+P + G+YVL+SN++A+ R+W DV+ +R  M   G+K
Sbjct: 395 LGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVK 454

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           KTPG S +E+GN+++ F   D+SH +S ++Y  L +ITE L+ E GYV  T  VL ++EE
Sbjct: 455 KTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLE-GYVPHTANVLADIEE 513

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           EEK Q L  HSE++AIA+ +L +  G+ IR+ KNLRVC DCH   KL+++++ RE+V+RD
Sbjct: 514 EEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVIRD 573

Query: 818 ANRFHHFEAGVCSCGDYW 835
            +RFHHF  G CSC DYW
Sbjct: 574 RSRFHHFRGGSCSCKDYW 591



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 178/344 (51%), Gaps = 4/344 (1%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F  +    VFTWN ++  Y  +  P      Y +M V  +  D  T+P ++KA + 
Sbjct: 71  AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISK 130

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
             ++  G  IH + ++ G++S  F+ NSL+ +YA C D   A ++F+ M E+ D+V WNS
Sbjct: 131 SLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKER-DLVAWNS 189

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I+ ++ +G+  EAL LFREM   G+  + +T V+ L A  +     LG  +H   +K G
Sbjct: 190 MINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVG 249

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +   +V N+L+ +YA+CG + EA  V  ++  +++VSW S++ G   N    +A++ F+
Sbjct: 250 LSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFK 309

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAKC 309
           E++G G  P ++  V  + A    G L  G E      ++ G +  ++    ++D+ ++ 
Sbjct: 310 EMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRA 369

Query: 310 CCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRT 352
             V         M  Q + + W T++ G    + HL   E+ R+
Sbjct: 370 GLVKQAYEYIQNMPVQPNAVIWRTLL-GACTIHGHLGLGEIARS 412



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 194/388 (50%), Gaps = 24/388 (6%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +V  WN+II  Y+ S     A   +R+M    +  + +T+   L+A   S     G  IH
Sbjct: 82  NVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIH 141

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           + T+++G    V+V N+L+ +YA CG    A  V   ++ +D V+WNSM+ GF  N    
Sbjct: 142 SVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPN 201

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+  FRE+   G +PD    V+ +SAS  LG L  G+ +H Y +K G   +  + N+L+
Sbjct: 202 EALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLL 261

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           D+YAKC  +    RVF +M+ ++ +SWT++I G A N    +ALELF+ ++ +GL    +
Sbjct: 262 DLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEI 321

Query: 364 IIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
               VL ACS       G +   + KE  G I R     +     +VD+  + G +   +
Sbjct: 322 TFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPR-----IEHYGCMVDLLSRAGLV---K 373

Query: 417 NVFESIESKDV----VSWTSMISS-YVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
             +E I++  V    V W +++ +  +H  L    +   +L+N     S    L+S L A
Sbjct: 374 QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYA 433

Query: 472 A----SSLSILKKGKELNGFIIRKGFNL 495
           +    S + ++++    +G     G++L
Sbjct: 434 SERRWSDVQVIRRSMLKDGVKKTPGYSL 461



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 212/423 (50%), Gaps = 24/423 (5%)

Query: 164 VAALQACEDSSFETLGMEIHAATVKSGQNLQV--YVANALIAMYARCGKMTEAAGVLYQL 221
           ++ LQ C  S  +    +IHA +++ G +L       + +  + +    M+ A  V   +
Sbjct: 21  ISLLQFCASSKHKL--KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVI 78

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
            N +  +WN+++ G+ ++D    A  F+R++  +  +PD       + A  +  N+  G+
Sbjct: 79  HNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGE 138

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
            +H+  I+ GF S + + N+L+ +YA C       +VF  M  +D ++W ++I G+A N 
Sbjct: 139 AIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNG 198

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILN 400
              +AL LFR + +EG++ D   + S+L A + L  +   + +H Y+++ GLS +  + N
Sbjct: 199 RPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTN 258

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
           +++D+Y KCG I  ++ VF  +  ++ VSWTS+I     NG   EALELF  M    +  
Sbjct: 259 SLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVP 318

Query: 461 DSITLVSALSAASSLSILKKG-------KELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
             IT V  L A S   +L +G       KE  G I R            +VD+ +R G +
Sbjct: 319 SEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEH------YGCMVDLLSRAGLV 372

Query: 514 DIANK-VFNCVQTKDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLAL 569
             A + + N     + ++W +++ A  +HG    G++A      +E +  + D++  L+ 
Sbjct: 373 KQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKH-SGDYV-LLSN 430

Query: 570 LYA 572
           LYA
Sbjct: 431 LYA 433



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 118/235 (50%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CG    A ++F+ + +R +  WN+M+  +  NG P   L  +  M V G+  D FT
Sbjct: 162 IYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFT 221

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A A L  L+ G ++H  +LK G      + NSL+ +YAKC   R+A+++F  M 
Sbjct: 222 VVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMS 281

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ + V W S+I   + +G   EAL LF+EM+  GLV +  TFV  L AC        G 
Sbjct: 282 ER-NAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGF 340

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           E       + G   ++     ++ + +R G + +A   +  +    ++V W ++L
Sbjct: 341 EYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 395


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/863 (31%), Positives = 433/863 (50%), Gaps = 83/863 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G V DA ++FD +  R    WNAM+  YV NG+     + +  M    +S      
Sbjct: 105 YARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSS----- 159

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
                                              N+++  Y       +AR LF+RM E
Sbjct: 160 ----------------------------------WNTMLTGYCHSQLMEEARNLFERMPE 185

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           +  V  W  +IS Y    Q   A  +FR M   G+       V+ L A        +   
Sbjct: 186 RNGVS-WTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILES 244

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ-LENKDSVSWNSMLTGFVQND 240
           IH    K+G    V V  A++  Y +   M ++A   ++ +  ++  +W++++    Q  
Sbjct: 245 IHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAG 304

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A   ++        P +   +  ++  GR+ +    K L     +   VS     N
Sbjct: 305 RIDDAFAVYQR-DPLKSVPSRTSMLTGLARYGRIDD---AKILFDQIHEPNVVS----WN 356

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++  Y +   V+    +F +M  ++ ISW  +IAGYA+N    +AL   + +  +G+  
Sbjct: 357 AMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLP 416

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI------- 412
            +  + S   ACS ++ +   K++H   ++ G   +  + NA++ +YGK  +I       
Sbjct: 417 SLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIF 476

Query: 413 ------------------------DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
                                   D +R+VF ++ S DVVSWT++IS+       NEA+E
Sbjct: 477 DRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVE 536

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           +F  M       +   L   L  + +L   + G++++   I+ G +    VA++LV MY 
Sbjct: 537 IFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYF 596

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           +C + D + KVF+ ++ +D+  W ++I     HG G+ AI ++  M +    P+ +TF+ 
Sbjct: 597 KCSSAD-SLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVG 655

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           LL+ACSHSGL++EG +F + M  DY L P  EHYAC+VDLLGRA  ++ A  F+  M IE
Sbjct: 656 LLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIE 715

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
           P + +W ALLGAC++H N E+G   A+KL  ++P N GNYV++SN++++   W +V +VR
Sbjct: 716 PDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVR 775

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
             M+  G+ K PG SW++I NK+HSF+  D+ H +   IY  L E+   L +  GYV  T
Sbjct: 776 KLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLL-KATGYVPDT 834

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
            FVLH+++EE+K   L  HSE+LA+AYG+L + +G  I+I KNLR+C DCH+F K VS +
Sbjct: 835 DFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSV 894

Query: 809 FGRELVVRDANRFHHFEAGVCSC 831
             RE+ VRD NRFHHF  G CSC
Sbjct: 895 TKREIDVRDGNRFHHFRNGSCSC 917



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 132/610 (21%), Positives = 260/610 (42%), Gaps = 94/610 (15%)

Query: 3   GKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFP 62
           G+ G + +A ++FD +  R +  WN+M+ AY +NG P                       
Sbjct: 44  GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMP----------------------- 80

Query: 63  CVIKACAMLKDLDCGAKIH-GLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
               A   L D   G  +  G +L  GY              A+    R AR++FD MG 
Sbjct: 81  ---DAGRSLADAISGGNLRTGTILLSGY--------------ARAGRVRDARRVFDGMGV 123

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + + V WN++++ Y  +G    A  LF                 A+ + + SS+      
Sbjct: 124 R-NTVAWNAMVTCYVQNGDITLARKLF----------------DAMPSRDVSSW------ 160

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
                            N ++  Y     M EA  +  ++  ++ VSW  M++G+V  + 
Sbjct: 161 -----------------NTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQ 203

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           + +A   FR +   G  P+Q   V+ +SA   LG     + +H    K GF  D+ +G  
Sbjct: 204 HGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTA 263

Query: 302 LMDMYAK-CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +++ Y K    ++   + F  M A++  +W+TIIA  +Q      A  +++   L+ + +
Sbjct: 264 ILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPS 323

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE 420
              ++       +GL    +  +      +    ++V  NA++  Y +   +D + ++F 
Sbjct: 324 RTSML-------TGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFN 376

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  ++ +SW  MI+ Y  NG + +AL     ++   +     +L S+  A S++  L+ 
Sbjct: 377 RMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALET 436

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++   ++ G      V ++L+ +Y +  ++    ++F+ +  KD + + S ++A   
Sbjct: 437 GKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQ 496

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           +     A D+F  M     +PD +++  ++ AC+ +   NE  +    M  + +L P P 
Sbjct: 497 NNLFDEARDVFNNMP----SPDVVSWTTIISACAQADQGNEAVEIFRSMLHEREL-PNPP 551

Query: 601 HYACLVDLLG 610
               L+ L G
Sbjct: 552 ILTILLGLSG 561


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/720 (33%), Positives = 408/720 (56%), Gaps = 7/720 (0%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
           ++NA++    + G    VL TYS M       DA TFP ++KAC  L     G   H  V
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           +  GY S  +I  SL+  Y+K    + AR++FD M ++ +VV W ++I  Y+ +G+   A
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDR-NVVPWTTMIGCYTRAGEHDVA 133

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME-IHAATVKSGQNLQVYVANALIA 203
             ++  M+R G+  ++ T +  L        E + ++ +HA  ++ G    V +AN+++ 
Sbjct: 134 FSMYNIMRRQGIQPSSVTMLGLLSGV----LELVHLQCLHACVIQYGFGSDVALANSMLN 189

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           +Y +CG++ +A  +   ++ +D +SWNS+++G+ Q     + +Q    ++  G +PDQ  
Sbjct: 190 VYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQT 249

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
             + VSA+     L  GK +H + ++ G   D  I  +L+ MY KC  VN   R+F  M 
Sbjct: 250 FGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMM 309

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
            +D ISWT +I+G  QN+C   A+ +FR +    +      I SVL AC+ L        
Sbjct: 310 HKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTS 369

Query: 384 IHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           +HGYI+R+ +  D+   N++V +Y KCG+++ S +VF+ +  +D+VSW +++S +  NG 
Sbjct: 370 VHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGH 429

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
             +AL LF  M +A    DSIT+VS L A +S+  L +GK ++ F+ +        + ++
Sbjct: 430 LCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTA 489

Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           LVDMY++CG L  A K F+ +  +DL+ W+S+I   G HG+G+ A+ ++         P+
Sbjct: 490 LVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPN 549

Query: 563 HITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV 622
           H+ +L++L ACSH+GL+++G  F   M  D+ ++P  EH AC+VDLL RA  +EEAY F 
Sbjct: 550 HVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFY 609

Query: 623 RSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWK 682
           + M  +P+ +V   LL ACR   N ELG+IVA++++ L P N GNYV +++ +A+ ++W 
Sbjct: 610 KRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWD 669

Query: 683 DVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREG 742
            V +V  +M+   LKK PG S+IE+   I +F     SH + +EI   L  +  ++ + G
Sbjct: 670 GVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIMLVLKILGSEMRKVG 729



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/519 (29%), Positives = 267/519 (51%), Gaps = 10/519 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G    A ++FD +  R V  W  M+G Y   GE       Y+ MR  GI   + T 
Sbjct: 93  YSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTM 152

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++     L  L C   +H  V++ G+ S   + NS++ +Y KC     A+ LF+ M +
Sbjct: 153 LGLLSGVLELVHLQC---LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELM-D 208

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             DV+ WNS++S Y+  G   E L L   M+  G+  +  TF + + A    S   +G  
Sbjct: 209 ARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKM 268

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +++G     ++  +LI MY +CG +  A  +   + +KD +SW +M++G VQND 
Sbjct: 269 VHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDC 328

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
              A+  FR +  +   P      + ++A   LG+   G  +H Y ++Q    D+   N+
Sbjct: 329 ADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNS 388

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ MYAKC  +     VF +M+ +D +SW  I++G+AQN    KAL LF  ++      D
Sbjct: 389 LVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPD 448

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNVFE 420
            + + S+L AC+ +  + Q K IH ++ +  L   ++++ A+VD+Y KCG++  ++  F+
Sbjct: 449 SITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFD 508

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  +D+VSW+S+I+ Y  +G    AL ++       ++ + +  +S LSA S   ++ +
Sbjct: 509 RMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQ 568

Query: 481 GKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIA 516
           G  L+ F  + K F +E  +   + +VD+ +R G ++ A
Sbjct: 569 G--LSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEA 605



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 204/394 (51%), Gaps = 12/394 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V DA+ LF+ +  R V +WN+++  Y   G    VL+   RM+  GI  D  T
Sbjct: 190 VYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQT 249

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ A AM   L  G  +HG +L+ G +    I  SL+ MY KC +   A ++F+ M 
Sbjct: 250 FGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMM 309

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K DV+ W ++IS    +     A+ +FR M +  ++ +  T  + L AC +     LG 
Sbjct: 310 HK-DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGT 368

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   ++    L +   N+L+ MYA+CG + ++  V  ++  +D VSWN++++G  QN 
Sbjct: 369 SVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNG 428

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             CKA+  F E++ A Q+PD +  V+ + A   +G L  GK +H +  K      + I  
Sbjct: 429 HLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDT 488

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  +    + F +M  QD +SW++IIAGY  +     AL ++      G+  
Sbjct: 489 ALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQP 548

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           + +I  S+L ACS           H  ++ +GLS
Sbjct: 549 NHVIYLSILSACS-----------HNGLVDQGLS 571



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 198/398 (49%), Gaps = 7/398 (1%)

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           N  + S+N+++        +C  +  +  +      PD     + V A   L    +G  
Sbjct: 10  NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
            H   I  G+ SD  I  +L++ Y+K        +VF  M  ++ + WTT+I  Y +   
Sbjct: 70  FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNA 401
           H  A  ++  ++ +G+    + +  +L   SG+  +   + +H  +I+ G  SD+ + N+
Sbjct: 130 HDVAFSMYNIMRRQGIQPSSVTMLGLL---SGVLELVHLQCLHACVIQYGFGSDVALANS 186

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           +++VY KCG ++ ++ +FE ++++DV+SW S++S Y   G   E L+L   M    +E D
Sbjct: 187 MLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPD 246

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
             T  S +SAA+  S L  GK ++G I+R G   +  + +SL+ MY +CG ++ A ++F 
Sbjct: 247 QQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFE 306

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  KD+I WT+MI+    +    +A+ +F +M      P   T  ++L AC+  G    
Sbjct: 307 GMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPL 366

Query: 582 GKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
           G      I+R   +LD   ++   LV +  +  HLE++
Sbjct: 367 GTSVHGYILRQRIKLDIPSQN--SLVTMYAKCGHLEQS 402


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/564 (40%), Positives = 340/564 (60%), Gaps = 5/564 (0%)

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G+L  G++LH   +  G   D  +   L+D+YA C  V +  R+F  M  ++   W  +I
Sbjct: 76  GSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLI 135

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI--IRKG 392
             YA+      A+ L+R +   G++ D      VL AC+ L  +   +E+H  +   R G
Sbjct: 136 RAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWG 195

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
             D+ +   +VD+Y KCG +D +R VF+ I  +D V W SMI++Y  NG   EAL L   
Sbjct: 196 -QDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRD 254

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M    +     TLVSA+SAA+  + L +G+EL+GF  R+GF L+  + +SLVDMYA+ G 
Sbjct: 255 MAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGW 314

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLY 571
           + +A  +F  +  ++L+ W +MI   G+HG    A+ LF KM+ ++   PD+ITF+ +L 
Sbjct: 315 VQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLS 374

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           AC+H G++ E K+F  +M   Y + P  +HY C++D+LG     EEAY  ++ M IEP +
Sbjct: 375 ACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDS 434

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
            +W ALL  C++H N ELGE+  +KL+EL+P + GNYV +SN++A S KW+   +VR  M
Sbjct: 435 GIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLM 494

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
              GLKK    SWIE+  K H F+  D SH  SDEIY +L E  E L  + GYV     V
Sbjct: 495 TNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGEL-ERLEGLMSDAGYVPDIIPV 553

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
            HNV+++EK  M+  HSERLAIA+G++ +  G+ + +TKNLRVC DCH   KL+S++  R
Sbjct: 554 FHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQR 613

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E+++RD NR+HHF  G CSC DYW
Sbjct: 614 EIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 189/391 (48%), Gaps = 31/391 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CG V  A +LFD + +R VF WN ++ AY   G     +  Y  M   G+  D FT
Sbjct: 106 LYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFT 165

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P V+KACA L DL+ G ++H  V    +    F+   +V MYAKC     AR +FD + 
Sbjct: 166 YPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIA 225

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V+WNS+I+AY  +G+ +EAL L R+M   G+     T V+A+ A  D++    G 
Sbjct: 226 VR-DAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGR 284

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H    + G  LQ  +  +L+ MYA+ G +  A  +  QL  ++ VSWN+M+ G+  + 
Sbjct: 285 ELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHG 344

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKE-----LHAYAIKQGFVS 294
              +A+  F +++G  Q  PD +  V  +SA    G +   KE     ++AY+IK     
Sbjct: 345 HADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIK----- 399

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAG-YAQNNCH 343
                   +  Y   C ++ +G       A D I           W  ++ G     N  
Sbjct: 400 ------PTVQHYT--CVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVE 451

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSG 374
           L  L L + ++LE  DA   +  S + A SG
Sbjct: 452 LGELALQKLIELEPEDAGNYVHLSNIYAQSG 482



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 186/380 (48%), Gaps = 13/380 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++++C     L  G ++HG +L  G      +   LV +YA C     AR+LFD M  K 
Sbjct: 68  ILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGM-PKR 126

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +V LWN +I AY+  G    A+ L+R M   G+  + +T+   L+AC        G E+H
Sbjct: 127 NVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVH 186

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
                +     V+V   ++ MYA+CG + +A  V   +  +D+V WNSM+  + QN    
Sbjct: 187 QRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPM 246

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+   R++   G  P     V+AVSA+     L  G+ELH +  ++GF    ++  +L+
Sbjct: 247 EALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLV 306

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADV 362
           DMYAK   V     +F Q+  ++ +SW  +I GY  +    +AL LF  ++ +  +  D 
Sbjct: 307 DMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDN 366

Query: 363 MIIGSVLMACSGLKCMSQTKE-----IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
           +    VL AC+    + + KE     ++ Y I+  +        ++DV G  G  + + +
Sbjct: 367 ITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQH---YTCVIDVLGHTGRFEEAYD 423

Query: 418 VFE--SIESKDVVSWTSMIS 435
           + +  SIE  D   W ++++
Sbjct: 424 LIKGMSIEP-DSGIWGALLN 442



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 105/196 (53%), Gaps = 1/196 (0%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           S+L +C     +   +++HG ++  GL  D V+   +VD+Y  CG + ++R +F+ +  +
Sbjct: 67  SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR 126

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           +V  W  +I +Y   G    A+ L+  M E  VE D+ T    L A ++L  L+ G+E++
Sbjct: 127 NVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVH 186

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
             +    +  +  V + +VDMYA+CG +D A  VF+ +  +D ++W SMI A G +GR  
Sbjct: 187 QRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPM 246

Query: 546 VAIDLFYKMEAESFAP 561
            A+ L   M A    P
Sbjct: 247 EALALCRDMAANGIGP 262



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 59/109 (54%)

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S L +  +   L+ G++L+G ++  G   +  +++ LVD+YA CG +  A ++F+ +  
Sbjct: 66  TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +++ LW  +I A    G  + A+ L+  M      PD+ T+  +L AC+
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACA 174


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/782 (32%), Positives = 425/782 (54%), Gaps = 8/782 (1%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D+  +  +++ C    D      IH  +LK G     F  N L+  Y K    + A  L
Sbjct: 47  LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M E+ +V  + ++   Y+    C + +GL+  + R G   N + F + L+       
Sbjct: 107 FDEMPERNNVS-YVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             +   +H+  VK G +   +V  ALI  Y+ CG +  A  V   +  KD V W  +++ 
Sbjct: 162 AEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSC 221

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +V+N  +  ++Q    +   G  P+      A+ AS  LG     K +H   +K  +  D
Sbjct: 222 YVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELD 281

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            ++G  L+ +Y +   ++   +VF +M   D + W+ +IA + QN    KA+++F  ++ 
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMRE 341

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
             +  +   + S+L  C+  KC    +++HG +++ G   D+ + NA++DVY KC  +D 
Sbjct: 342 GFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDT 401

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +  +F  + SK+VVSW ++I  Y + G   +AL +F       V    +T  SAL A +S
Sbjct: 402 AVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACAS 461

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L+ ++ G +++G  I+       +V++SL+DMYA+CG + +A  VFN ++T D+  W ++
Sbjct: 462 LASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNAL 521

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I+    HG G+ A+ +F  M+     P+ +TFL +L  CS++GLI++G+   E M CD+ 
Sbjct: 522 ISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHG 581

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           ++P  EHY C+V L GR+  L++A   +  +  EP+  +W A+L A     N+E     A
Sbjct: 582 IEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSA 641

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           +++L+++P +   YVL+SN++A +++W +V  +R  M+  G+KK PG SWIE    +H F
Sbjct: 642 EEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFF 701

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
                 H +   I   L  +  K  R  GYV     VL ++++EEK + L+ HSERLA+A
Sbjct: 702 SVGSSDHPDMKLINGMLEWLNMKATR-AGYVPDRNAVLLDMDDEEKDKRLWVHSERLALA 760

Query: 775 YGVLK-STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
           YG+++  +  + I I KNLR+C DCHS  K++S +  R+LV+RD NRFHHF AGVCSC D
Sbjct: 761 YGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDD 820

Query: 834 YW 835
           +W
Sbjct: 821 HW 822



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 270/542 (49%), Gaps = 12/542 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G   DA  LFD++ +R   ++  +   Y    +P+ +   YSR+   G  ++   F
Sbjct: 94  YVKAGFDKDALNLFDEMPERNNVSYVTLTQGYACQ-DPVGL---YSRLHREGHELNPHVF 149

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              +K    L   +    +H  ++K GYDS  F+  +L+  Y+ C     AR +F+ +  
Sbjct: 150 TSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILC 209

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D+V+W  I+S Y  +G   ++L L   M   G + N YTF  AL+A            
Sbjct: 210 K-DIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKS 268

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +K+   L   V   L+ +Y + G M++A  V  ++   D V W+ M+  F QN  
Sbjct: 269 VHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVS--ASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             KA+  F  ++     P++    + ++  A G+   L  G++LH   +K GF  D+ + 
Sbjct: 329 CNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDVYVS 386

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+D+YAKC  ++   ++F ++++++ +SW T+I GY       KAL +FR      + 
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVS 446

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNV 418
              +   S L AC+ L  M    ++HG  I+   +  V + N+++D+Y KCG+I  ++ V
Sbjct: 447 VTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTV 506

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  +E+ DV SW ++IS Y  +GL  +AL +F +M  ++ + + +T +  LS  S+  ++
Sbjct: 507 FNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLI 566

Query: 479 KKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMIN 536
            +G++     I   G        + +V ++ R G LD A N +        +++W +M++
Sbjct: 567 DQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLS 626

Query: 537 AN 538
           A+
Sbjct: 627 AS 628



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 158/282 (56%), Gaps = 1/282 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G + DA ++F+++ +  V  W+ M+  +  NG   + ++ + RMR   +  + FT
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFT 350

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++  CA+ K    G ++HGLV+K G+D   ++ N+L+ +YAKC     A +LF  + 
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELS 410

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +VV WN++I  Y   G+  +AL +FRE  R  +     TF +AL AC   +   LG+
Sbjct: 411 SK-NVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGV 469

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +K+    +V V+N+LI MYA+CG +  A  V  ++E  D  SWN++++G+  + 
Sbjct: 470 QVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHG 529

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           L  +A++ F  ++G+  KP+ +  +  +S     G +  G++
Sbjct: 530 LGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQD 571



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  +  A +LF ++S + V +WN ++  Y + GE  + L  +       +SV   T
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVT 451

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   + ACA L  ++ G ++HGL +K        + NSL+ MYAKC D + A+ +F+ M 
Sbjct: 452 FSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEM- 510

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  DV  WN++IS YS  G   +AL +F  M+      N  TF+  L  C ++     G 
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQ 570

Query: 181 EIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
           +   + +   G    +     ++ ++ R G++ +A  ++  +  + SV  W +ML+ 
Sbjct: 571 DCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSA 627


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 241/676 (35%), Positives = 394/676 (58%), Gaps = 5/676 (0%)

Query: 164 VAALQACEDSSFETLGMEIHAATVKSGQNLQ--VYVANALIAMYARCGKMTEAAGVLYQL 221
           +  L+   D+     G  IHA  + + Q  +  +   N+LI +YA+C ++  A  +   +
Sbjct: 29  IQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM 88

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG-QKPDQVCTVNAVSASGRLGNLLNG 280
             ++ VSW +++ G+  N L  + ++ F+ +      +P++      +S+    G ++ G
Sbjct: 89  RKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEG 148

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
            + H YA+K G V    + N L+ MY++   V     V+Y++   D  S+  II G  +N
Sbjct: 149 WQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLEN 208

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVIL 399
               +ALE+   +  E +  D +   +    CS LK +    ++H  + R G   D  + 
Sbjct: 209 GYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVS 268

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           +AI+D+YGKCGNI  +R VF  +++K+VVSWT+++++Y  NG   EAL  F  M    + 
Sbjct: 269 SAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLL 328

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            +  T    L++ + +S L  GK L+  I + GF     V ++L++MY++ G+++ A+KV
Sbjct: 329 PNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKV 388

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  +  +D I W++MI     HG G+ A+ +F +M A    P ++TF+ +L AC+H G +
Sbjct: 389 FLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSV 448

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
            EG  +L  +     ++P  EHY C+V LL +A  L+EA  F++S  ++     W  LL 
Sbjct: 449 QEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLS 508

Query: 640 ACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           AC VH N  LG+ VA+ +L++DPG+ G Y+L+SN++A +++W  V ++R  MR   +KK 
Sbjct: 509 ACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKE 568

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG+SWIEI N IH F++  K+H ES++IY+K+ E+   + R  GYV     V H+VE+E+
Sbjct: 569 PGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMI-RPMGYVPDIAAVFHDVEDEQ 627

Query: 760 KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDAN 819
           K + +  HSE+LAIAYG++K+  G+ IR+ KNLR+CVDCHS  KL+S++  R ++VRDAN
Sbjct: 628 KREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDAN 687

Query: 820 RFHHFEAGVCSCGDYW 835
           RFH F  G CSC DYW
Sbjct: 688 RFHCFGDGGCSCADYW 703



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/502 (30%), Positives = 252/502 (50%), Gaps = 10/502 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV--NSLVAMYAKCYDFRKARQLFDRMGE 121
           ++K  A  K+L  G  IH  ++     + D IV  NSL+ +YAKC     AR LFD M  
Sbjct: 31  LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM-R 89

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLGM 180
           K +VV W ++++ Y  +G  LE L LF+ M  V  +  N Y F   + +C DS     G 
Sbjct: 90  KRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGW 149

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   +KSG     YV NALI MY+R   +  A  V Y++   D  S+N ++ G ++N 
Sbjct: 150 QCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENG 209

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++    +       D V  V A      L +L  G ++H    + G   D  + +
Sbjct: 210 YPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSS 269

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++DMY KC  +    +VF ++  ++ +SWT I+A Y+QN C  +AL  F  ++++GL  
Sbjct: 270 AIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLP 329

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVF 419
           +      +L +C+G+  +   K +H  I + G  D +I+ NA++++Y K G+I+ +  VF
Sbjct: 330 NEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVF 389

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  +D ++W++MI    H+GL  EAL +F  M  A      +T V  LSA + L  ++
Sbjct: 390 LEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQ 449

Query: 480 KG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           +G   LN  + + G        + +V +  + G LD A         K D++ W ++++A
Sbjct: 450 EGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSA 509

Query: 538 NGLH---GRGKVAIDLFYKMEA 556
             +H   G GK   +L  +M+ 
Sbjct: 510 CHVHQNYGLGKKVAELVLQMDP 531



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 232/474 (48%), Gaps = 26/474 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD--- 57
           +Y KC  ++ A  LFD + +R V +W A++  Y  NG  L VL  +  M    ISVD   
Sbjct: 71  LYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTM----ISVDYMR 126

Query: 58  --AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
              + F  +I +C+    +  G + HG  LK G     ++ N+L+ MY++  D + A  +
Sbjct: 127 PNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSV 186

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           +  +    DV  +N II+    +G   EAL +   M    +V +  T+V A   C     
Sbjct: 187 WYEV-PGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKD 245

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             LG+++H    ++G     +V++A+I MY +CG +  A  V  +L+ K+ VSW ++L  
Sbjct: 246 LRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAA 305

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           + QN  + +A+ FF E++  G  P++      +++   +  L +GK LH    K GF   
Sbjct: 306 YSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDH 365

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + +GN L++MY+K   +    +VF +M  +D I+W+ +I G + +    +AL +F+ +  
Sbjct: 366 IIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLA 425

Query: 356 EGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGK 408
                  +    VL AC+       G   ++Q  +  G  I  G+        IV +  K
Sbjct: 426 AKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTG--IEPGVEH---YTCIVGLLCK 480

Query: 409 CGNIDYSRNVFESIESK-DVVSWTSMISS-YVHN--GLANEALELFYLMNEANV 458
            G +D + N  +S   K DVV+W +++S+ +VH   GL  +  EL   M+  +V
Sbjct: 481 AGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDV 534


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/697 (36%), Positives = 391/697 (56%), Gaps = 13/697 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD--RMGE 121
           +++ C     L  G + H  +L  G      +   L+ MY  C  F  A+ +F   R+  
Sbjct: 52  ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            E    WN +I  ++  GQ   AL  + +M   G + + YTF   ++AC   +   LG  
Sbjct: 112 SEP---WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H      G  L V+V ++LI  Y+  G + +A  +  ++ +KD V WN ML G+V+N  
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 242 YCKAMQFFRELQGAGQKPDQV--CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +  A   F E++     P+ V    V +V AS  + N   G +LH   +  G   D  + 
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINF--GSQLHGLVVSSGLEMDSPVA 286

Query: 300 NT--LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           NT  L+D+Y KC  V    ++F Q T  D +  T +I+GY  N  +  ALE+FR +  E 
Sbjct: 287 NTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER 346

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
           + A+ + + SVL AC+GL  ++  KE+HG+I++ G      + +AI+D+Y KCG +D + 
Sbjct: 347 MRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAH 406

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
             F  I  KD V W SMI+S   NG   EA++LF  M  A  + D +++ +ALSA ++L 
Sbjct: 407 QTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLP 466

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L  GKE++ F++R  F  +    S+L+DMY++CG LD+A +VF+ ++ K+ + W S+I 
Sbjct: 467 ALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIA 526

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           A G HGR K +++LF+ M  +   PDH+TFLA++ AC H+G ++EG  +   M  +  + 
Sbjct: 527 AYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIM 586

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
              EHYAC+VDL GRA  L EA+  + SM   P A VW  LLGACR+H N EL E+ ++ 
Sbjct: 587 ARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRN 646

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L +LDP N G YVL+SNV A + +W+ V ++R  M+  G++K PG SWI++ N  H F+A
Sbjct: 647 LFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVA 706

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            D+SH +S +IY  L  +  +L +E GYV Q    +H
Sbjct: 707 ADRSHPQSSQIYLLLKNLFLELRKE-GYVPQLYLPMH 742



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 285/552 (51%), Gaps = 6/552 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG+ LDA+ +F ++       WN M+  +   G+    L  Y +M   G   D +T
Sbjct: 90  MYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYT 149

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP VIKAC  L  +  G  +H  +   G++   F+ +SL+  Y++      AR LFDRM 
Sbjct: 150 FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP 209

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D VLWN +++ Y  +G    A G+F EM+R     N+ TF   L  C        G 
Sbjct: 210 SK-DGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268

Query: 181 EIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           ++H   V SG  +   VAN  ALI +Y +C  +  A  +  Q    D V   +M++G+V 
Sbjct: 269 QLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVL 328

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N +   A++ FR L     + + V   + + A   L  L  GKELH + +K G      +
Sbjct: 329 NGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYV 388

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G+ +MDMYAKC  ++   + F  ++ +D + W ++I   +QN    +A++LFR + + G 
Sbjct: 389 GSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGT 448

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D + I + L AC+ L  +   KEIH +++R    SDL   +A++D+Y KCGN+D +  
Sbjct: 449 KYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACR 508

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+++E K+ VSW S+I++Y ++G   ++L LF+ M    ++ D +T ++ +SA      
Sbjct: 509 VFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQ 568

Query: 478 LKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMI 535
           + +G      +  + G        + +VD++ R G L+ A  + N +  + D  +W +++
Sbjct: 569 VDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLL 628

Query: 536 NANGLHGRGKVA 547
            A  LHG  ++A
Sbjct: 629 GACRLHGNVELA 640



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 257/489 (52%), Gaps = 7/489 (1%)

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
           A   V+ LQ C D S  + G + HA  + +G      +   L+ MY  CG   +A  + Y
Sbjct: 46  APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFY 105

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
           QL    S  WN M+ GF     +  A+ F+ ++ G G  PD+      + A G L ++  
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVAL 165

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +H      GF  D+ +G++L+  Y++  C++    +F +M ++D + W  ++ GY +
Sbjct: 166 GRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK 225

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
           N     A  +F  ++    + + +    VL  C+    ++   ++HG ++  GL  D  +
Sbjct: 226 NGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPV 285

Query: 399 LN--AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            N  A++D+Y KC +++ +R +F+     D+V  T+MIS YV NG+ N ALE+F  + + 
Sbjct: 286 ANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQE 345

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            + ++S+TL S L A + L+ L  GKEL+G I++ G      V S+++DMYA+CG LD+A
Sbjct: 346 RMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLA 405

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
           ++ F  +  KD + W SMI +   +G+ + AIDLF +M       D ++  A L AC++ 
Sbjct: 406 HQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANL 465

Query: 577 GLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
             ++ GK+    +MR  ++ D + E  + L+D+  +  +L+ A +   +M+ E     W 
Sbjct: 466 PALHYGKEIHAFMMRGAFRSDLFAE--SALIDMYSKCGNLDLACRVFDTME-EKNEVSWN 522

Query: 636 ALLGACRVH 644
           +++ A   H
Sbjct: 523 SIIAAYGNH 531



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 100/269 (37%), Gaps = 41/269 (15%)

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           N +S +  LVS L   +  S L +G++ +  ++  G    G + + L+ MY  CGA   A
Sbjct: 41  NDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDA 100

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             +F  ++      W  MI    + G+   A+  ++KM      PD  TF  ++ AC   
Sbjct: 101 KNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGL 160

Query: 577 GLINEGK----------------------KFLE----IMRCDYQLDPWPEHYACLVDLL- 609
             +  G+                      KF      I    Y  D  P     L +++ 
Sbjct: 161 NSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVML 220

Query: 610 ------GRANHLEEAYQFVRSMQIEPTAEVWCALLGAC----RVHSNKELGEIVAKKLLE 659
                 G  ++    +  +R  +  P +  +  +L  C     ++   +L  +V    LE
Sbjct: 221 NGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLE 280

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVR 688
           +D      + LI   F    K +DVE  R
Sbjct: 281 MDSPVANTFALIDIYF----KCRDVEMAR 305


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/588 (39%), Positives = 350/588 (59%), Gaps = 33/588 (5%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKC--------------------CCVNYMG--- 316
           GK+LH+  I  G  SD  I N L+++Y+KC                    C +   G   
Sbjct: 71  GKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFR 130

Query: 317 --------RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
                   ++F +M  ++  +W  ++AG  Q   + + L LF  +   G   D   +GSV
Sbjct: 131 SGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSV 190

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           L  C+GL+ +   +++HGY+ + G   +LV+++++  +Y KCG++     +  ++ S++V
Sbjct: 191 LRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNV 250

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           V+W ++I+    NG   E L+ + +M  A    D IT VS +S+ S L+ L +G++++  
Sbjct: 251 VAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAE 310

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
           +I+ G +L  SV SSL+ MY+RCG L+ + KVF   +  D++ W+SMI A G HGRG  A
Sbjct: 311 VIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEA 370

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           IDLF +ME E    + +TFL+LLYACSH GL  +G KF ++M   Y + P  EHY C+VD
Sbjct: 371 IDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVD 430

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
           LLGR   +EEA   +RSM ++     W  LL AC++H   E+   +++++  LDP +P  
Sbjct: 431 LLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVP 490

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
           YVL+SN+ A+ ++W DV  VR  MR   LKK PG SW+E+ N+IH F   DKSH +S EI
Sbjct: 491 YVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEI 550

Query: 728 YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIR 787
              L E+T ++++  GYV     VLH+++ E+K   L  HSE+LAIA+ +L +  G+ IR
Sbjct: 551 ASYLRELTSEMKKR-GYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIR 609

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + KNLRVC DCH   K +S +  RE++VRD++RFHHF+ G CSCGDYW
Sbjct: 610 VIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 204/415 (49%), Gaps = 45/415 (10%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY------------- 107
           F  ++++C     L  G ++H L++  G  S  FI N L+ +Y+KC              
Sbjct: 55  FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114

Query: 108 ------------------DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                             D+  AR++FD M E+ +V  WN++++         E LGLF 
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPER-NVATWNAMVAGLIQFEFNEEGLGLFS 173

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
            M  +G + + +   + L+ C        G ++H    K G    + V ++L  MY +CG
Sbjct: 174 RMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCG 233

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + E   ++  + +++ V+WN+++ G  QN    + +  +  ++ AG +PD++  V+ +S
Sbjct: 234 SLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVIS 293

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           +   L  L  G+++HA  IK G    + + ++L+ MY++C C+ Y  +VF +    D + 
Sbjct: 294 SCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVC 353

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTK 382
           W+++IA Y  +   ++A++LF  ++ E L+A+ +   S+L ACS       G+K      
Sbjct: 354 WSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMV 413

Query: 383 EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           E +G   R     L     +VD+ G+ G+++ +  +  S+  K DV++W +++S+
Sbjct: 414 EKYGVKPR-----LEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 169/337 (50%), Gaps = 3/337 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G  + A ++FD++ +R V TWNAM+   +        L  +SRM  LG   D F  
Sbjct: 128 YFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFAL 187

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V++ CA L+ L  G ++HG V KCG++    +V+SL  MY KC    +  +L   M  
Sbjct: 188 GSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAM-P 246

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            ++VV WN++I+  + +G   E L  +  M+  G   +  TFV+ + +C + +    G +
Sbjct: 247 SQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQ 306

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IHA  +K+G +L V V ++LI+MY+RCG +  +  V  + EN D V W+SM+  +  +  
Sbjct: 307 IHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGR 366

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI-KQGFVSDLQIGN 300
             +A+  F +++    + + V  ++ + A    G    G +     + K G    L+   
Sbjct: 367 GVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYT 426

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG 336
            ++D+  +   V     +   M  + D I+W T+++ 
Sbjct: 427 CMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 126/237 (53%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ + E+L   +  + V  WN ++     NG P  VL+ Y+ M++ G   D  T
Sbjct: 228 MYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKIT 287

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VI +C+ L  L  G +IH  V+K G      +++SL++MY++C     + ++F    
Sbjct: 288 FVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLEC- 346

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  DVV W+S+I+AY   G+ +EA+ LF +M++  L  N  TF++ L AC     +  G+
Sbjct: 347 ENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGI 406

Query: 181 EIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLTG 235
           +     V K G   ++     ++ +  R G + EA  ++  +  K D ++W ++L+ 
Sbjct: 407 KFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 118/253 (46%), Gaps = 32/253 (12%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS------- 415
           +   +L +C     +S  K++H  II  G S D  I N ++++Y KCG +D +       
Sbjct: 54  LFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVM 113

Query: 416 ------------------------RNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
                                   R +F+ +  ++V +W +M++  +      E L LF 
Sbjct: 114 PRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFS 173

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
            MNE     D   L S L   + L  L  G++++G++ + GF     V SSL  MY +CG
Sbjct: 174 RMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCG 233

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
           +L    ++   + +++++ W ++I     +G  +  +D +  M+   F PD ITF++++ 
Sbjct: 234 SLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVIS 293

Query: 572 ACSHSGLINEGKK 584
           +CS    + +G++
Sbjct: 294 SCSELATLGQGQQ 306


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/801 (32%), Positives = 429/801 (53%), Gaps = 43/801 (5%)

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D++    +H  + K   D    + N+L+  Y K      A ++F  +    +VV + ++I
Sbjct: 105 DVELIKAVHASIFKLAEDI--HLANALIVAYLKLGMVPNAYKVFVGL-SCPNVVSYTAMI 161

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           S ++ S +  +A+ +F  M+  G+  N ++FVA L  C       LG ++HA  +K G  
Sbjct: 162 SGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFL 221

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
              +V+NAL+ +Y +CG +     +  ++ ++D  SWN++++  V+  +Y +A + FR++
Sbjct: 222 NYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDM 281

Query: 253 QGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           +   G + D       + A+  L +++ G+E+HA+ IK GF S++ + N L+  Y KC  
Sbjct: 282 RRIDGFRIDHFTLSTILVAARGLASMV-GREIHAHVIKIGFESNISVINALIRFYTKCGS 340

Query: 312 VNYMGRVFYQMTAQDFISWT-------------------------------TIIAGYAQN 340
           + ++  +F +M  +D I+WT                                I++G+ QN
Sbjct: 341 IKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQN 400

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
               KAL  F  +  EG++     +  VL AC  L     +K+IHG+I++ G  S+  I 
Sbjct: 401 GEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIE 460

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDV--VSWTSMISSYVHNGLANEALELFYLMN-EA 456
            A++D+  +CG +  ++ +F          + WTSMI  Y  N    EA+ LF     E 
Sbjct: 461 AALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEG 520

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +  D +   + L    +L+  + GK+++   ++ GF  +  V +S++ MY++C  +D A
Sbjct: 521 AMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDA 580

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH- 575
            KVFN +   D++ W  +I  + LH +G  A+ ++ KME     PD +TF+ ++ A  H 
Sbjct: 581 IKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHT 640

Query: 576 -SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
            S L++  ++    M+  Y +DP  EHY  LV +LG    LEEA + +  M IEP A VW
Sbjct: 641 NSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVW 700

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALL ACR+HSN  +G+  AK LL + P +P  Y+L+SN+++A  +W   + VR  MR  
Sbjct: 701 RALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVK 760

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           G +K PG SWI   NK+HSF ARDKSH ++ +I+  L  +  +  +  GYV  T FVLH 
Sbjct: 761 GFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLK-AGYVPDTSFVLHE 819

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           VEE +K   L+ HS ++A  YG+L +  G  IRI KN+ +C DCH+F K VS + GRE+ 
Sbjct: 820 VEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIF 879

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RDA+  H F  G CSC DYW
Sbjct: 880 LRDASGHHCFLNGQCSCKDYW 900



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 163/594 (27%), Positives = 292/594 (49%), Gaps = 58/594 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G V +A ++F  +S   V ++ AM+  +  +    + +E + RMR  GI ++ F+F
Sbjct: 133 YLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSF 192

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++  C  L DL+ G ++H +V+K G+ +  F+ N+L+ +Y KC       QLFD M  
Sbjct: 193 VAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPH 252

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLGM 180
           + D+  WN++IS+         A  LFR+M+R+ G   + +T    L A    +   +G 
Sbjct: 253 R-DIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA-SMVGR 310

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW----------- 229
           EIHA  +K G    + V NALI  Y +CG +     +  ++  +D ++W           
Sbjct: 311 EIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFG 370

Query: 230 --------------------NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
                               N++L+GF QN    KA+ FF  +   G +         ++
Sbjct: 371 LTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLN 430

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV--------FYQ 321
           A G L      K++H + +K GF S+  I   L+DM  +C      GR+           
Sbjct: 431 ACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRC------GRMADAQKMFSQGS 484

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQ 380
            +    I WT++I GYA+N    +A+ LF   QLEG +  D +   +VL  C  L     
Sbjct: 485 FSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEM 544

Query: 381 TKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
            K+IH + ++ G LSDL + N+I+ +Y KC N+D +  VF  + + D+VSW  +I+ ++ 
Sbjct: 545 GKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLL 604

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSA--ASSLSILKKGKELNGFIIRKG-FNLE 496
           +   +EAL ++  M +A ++ D++T V  +SA   ++ +++   + L  F+  K  ++++
Sbjct: 605 HRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRL--FLSMKTIYHID 662

Query: 497 GSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA 547
            +V   +SLV +    G L+ A ++ N +  + +  +W ++++A  +H    + 
Sbjct: 663 PTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIG 716



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 189/399 (47%), Gaps = 39/399 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           +YGKCG +    QLFD++  R + +WN ++ + V      R  E +  MR + G  +D F
Sbjct: 233 LYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHF 292

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++ A   L  +  G +IH  V+K G++S   ++N+L+  Y KC   +    LF++M
Sbjct: 293 TLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKM 351

Query: 120 GEKEDVVLW-------------------------------NSIISAYSASGQCLEALGLF 148
               DV+ W                               N+I+S +  +G+  +AL  F
Sbjct: 352 -RVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFF 410

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
             M   G+    +T    L AC       +  +IH   +K G      +  AL+ M  RC
Sbjct: 411 CRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRC 470

Query: 209 GKMTEAAGV--LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF--RELQGAGQKPDQVCT 264
           G+M +A  +          S+ W SM+ G+ +N    +A+  F   +L+GA    D+V +
Sbjct: 471 GRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGA-MVVDKVAS 529

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
              +   G L     GK++H +A+K GF+SDL +GN+++ MY+KC  ++   +VF  M A
Sbjct: 530 TAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPA 589

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
            D +SW  +IAG+  +    +AL ++  ++  G+  D +
Sbjct: 590 HDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTV 628



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 3/137 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC ++ DA ++F+ +    + +WN ++  ++ + +    L  +S+M   GI  D  T
Sbjct: 570 MYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVT 629

Query: 61  FPCVIKACAMLK-DLDCGAKIHGLVLKCGY--DSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           F  +I A      +L    +   L +K  Y  D T     SLV +        +A ++ +
Sbjct: 630 FVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMIN 689

Query: 118 RMGEKEDVVLWNSIISA 134
           +M  + +  +W +++ A
Sbjct: 690 KMPIEPEASVWRALLDA 706


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 241/682 (35%), Positives = 390/682 (57%), Gaps = 15/682 (2%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L+A    S    G+++HAA +K G      + N LI MYA+CGK+  A  V   +  ++ 
Sbjct: 11  LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 70

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           VSW +++ GF+ +    + ++ F E++G+G  P++      + A G  G    G ++H  
Sbjct: 71  VSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGV 128

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            ++ GF     + N+L+ MY+K        RVF  + +++  +W ++I+GYA       +
Sbjct: 129 CVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDS 188

Query: 347 LELFRTVQLEGLD-ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS---DLVILNAI 402
           L +FR +Q    +  D     S+L ACSGL    +  ++H  +  +G+S   + ++  A+
Sbjct: 189 LLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGAL 248

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +DVY KC  +  +  VF+ +E ++ + WT++I  +   G   EA+ LF     + V +D 
Sbjct: 249 LDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADG 308

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
             L S ++  +  +++++GK+++ +  +    L+ SVA+SLVDMY +CG    A + F  
Sbjct: 309 HVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFRE 368

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +  ++++ WT+MIN  G HG G+ AIDLF +M+ E    D + +LALL ACSHSGL++E 
Sbjct: 369 MPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDEC 428

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
           +++   +  D ++ P  EHYAC+VDLLGRA  L EA + + SM +EPT  VW  LL ACR
Sbjct: 429 RRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACR 488

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
           VH +  +G  V   LL +D  NP NYV++SN+ A + +W++ + +R  MR  GL+K  G 
Sbjct: 489 VHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGC 548

Query: 703 SWIEIGNKIHSFI-ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
           SW E+  ++H F    D +H ++ +I + L E+  ++    GY    +  LH+V+EE +V
Sbjct: 549 SWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRV 608

Query: 762 QMLYGHSERLAIAYGVLK--------STEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           + L  HSERLA+   +L+           G ++R+ KNLRVC DCH F K +S +  R +
Sbjct: 609 ESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVV 668

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           VVRDANRFH F+ G CSC DYW
Sbjct: 669 VVRDANRFHRFQNGACSCRDYW 690



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 261/514 (50%), Gaps = 16/514 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++FD + +R V +W A++  ++ +GE    L  +  MR  G S + FT
Sbjct: 48  MYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFT 107

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               +KAC        G +IHG+ ++ G++  D + NSLV MY+K      AR++FD + 
Sbjct: 108 LSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIP 165

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLG 179
            + ++  WNS+IS Y+ +GQ  ++L +FREMQR      + +TF + L+AC        G
Sbjct: 166 SR-NLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREG 224

Query: 180 MEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            ++HAA    G +      +A AL+ +Y +C ++  A  V   LE ++++ W +++ G  
Sbjct: 225 AQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHA 284

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q     +AM  FR    +G + D     + V+       +  GK++H Y  K     D+ 
Sbjct: 285 QEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVS 344

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N+L+DMY KC      GR F +M A++ +SWT +I G  ++    +A++LF  +Q EG
Sbjct: 345 VANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEG 404

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKCGNIDYS 415
           ++AD +   ++L ACS    + + +     I   R+          +VD+ G+ G +  +
Sbjct: 405 VEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREA 464

Query: 416 RNVFESIESKDVVS-WTSMISS-YVHNGLA--NEALELFYLMNEANVESDSITLVSALSA 471
           + +  S+  +  V  W +++S+  VH  +A   E  ++   ++  N   + + L + L+ 
Sbjct: 465 KELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDN-PVNYVMLSNILAE 523

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A      ++ + + G + RKG   +G  + + VD
Sbjct: 524 AGE---WRECQGIRGAMRRKGLRKQGGCSWTEVD 554



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 251/484 (51%), Gaps = 9/484 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++A A    L  G ++H  ++K G+ S   + N+L+ MYAKC     A ++FD M E+ 
Sbjct: 10  LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER- 68

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +VV W +++  +   G+  E L LF EM+  G   N +T  A L+AC   +    G++IH
Sbjct: 69  NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQIH 126

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              V++G      VAN+L+ MY++     +A  V   + +++  +WNSM++G+       
Sbjct: 127 GVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGR 186

Query: 244 KAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--VSDLQIGN 300
            ++  FRE+Q    ++PD+    + + A   LG    G ++HA    +G    S+  +  
Sbjct: 187 DSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAG 246

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y KC  +    +VF  +  ++ I WTT+I G+AQ     +A+ LFR     G+ A
Sbjct: 247 ALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRA 306

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D  ++ SV+   +    + Q K++H Y  +     D+ + N++VD+Y KCG    +   F
Sbjct: 307 DGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRF 366

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             + +++VVSWT+MI+    +G   EA++LF  M E  VE+D +  ++ LSA S   ++ 
Sbjct: 367 REMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVD 426

Query: 480 KGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINA 537
           + +     I + +    +    + +VD+  R G L  A ++   +  +  + +W ++++A
Sbjct: 427 ECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSA 486

Query: 538 NGLH 541
             +H
Sbjct: 487 CRVH 490


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/739 (34%), Positives = 399/739 (53%), Gaps = 56/739 (7%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N+++A Y+       A  LF R   + D   +N+++ A + S    +A GLF EM     
Sbjct: 73  NAMLAGYSANGRLPLAASLF-RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMP---- 127

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           V ++ T+   + +  +    +L    H   +   ++   +  N ++A Y R G++ EA G
Sbjct: 128 VRDSVTYNVMISSHANHGLVSLAR--HYFDLAPEKDAVSW--NGMLAAYVRNGRVEEARG 183

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           +       D++SWN++++G+VQ     +A + F  + G     D V     VS   R G+
Sbjct: 184 LFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGD 239

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           ++  + L   A     V D+     ++  YA+   +    RVF  M  ++ +SW  ++A 
Sbjct: 240 MVEARRLFDAAP----VRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAA 295

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL 396
           Y Q     +A ELF                  +M C                      ++
Sbjct: 296 YIQRRMMDEAKELFN-----------------MMPCR---------------------NV 317

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
              N ++  Y + G ++ ++ VF+++  KD VSW +M+++Y   G + E L+LF  M   
Sbjct: 318 ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 377

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
               +       LS  + ++ L+ G +L+G +IR G+ +   V ++L+ MY +CG ++ A
Sbjct: 378 GEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDA 437

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
              F  ++ +D++ W +MI     HG GK A+++F  M   S  PD IT + +L ACSHS
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHS 497

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           GL+ +G  +   M  D+ +   PEHY C++DLLGRA  L EA+  ++ M  EP + +W A
Sbjct: 498 GLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 557

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LLGA R+H N ELG   A+K+ EL+P N G YVL+SN++A+S KW+D  ++R+ M   G+
Sbjct: 558 LLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 617

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           KK PG SWIE+ NK+H+F A D  H E ++IY  L ++  ++ ++ GYV+ T  VLH+VE
Sbjct: 618 KKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRM-KKAGYVSATDMVLHDVE 676

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EEEK  ML  HSE+LA+AYG+L    G  IR+ KNLRVC DCH+  K +S + GR +++R
Sbjct: 677 EEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLR 736

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D+NRFHHF  G CSCGDYW
Sbjct: 737 DSNRFHHFRGGSCSCGDYW 755



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 267/567 (47%), Gaps = 43/567 (7%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           + G V DAE+LF  + +R+  T+NAML  Y +NG   R+    S  R +    D +++  
Sbjct: 50  RAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG---RLPLAASLFRAIP-RPDNYSYNT 105

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGY-DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           ++ A A+   L   A   GL  +    DS  +  N +++ +A       AR  FD   EK
Sbjct: 106 LLHALAVSSSL---ADARGLFDEMPVRDSVTY--NVMISSHANHGLVSLARHYFDLAPEK 160

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D V WN +++AY  +G+  EA GLF        ++        +Q  + S    L   +
Sbjct: 161 -DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRM 219

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
               V S         N +++ YAR G M EA  +      +D  +W ++++G+ QN + 
Sbjct: 220 PGRDVVSW--------NIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGML 271

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF----VSDLQI 298
            +A + F          D +   NAVS +  +   +  + +     K+ F      ++  
Sbjct: 272 EEARRVF----------DAMPERNAVSWNAMVAAYIQRRMMD--EAKELFNMMPCRNVAS 319

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            NT++  YA+   +     VF  M  +D +SW  ++A Y+Q  C  + L+LF  +   G 
Sbjct: 320 WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             +      VL  C+ +  +    ++HG +IR G      + NA++ +Y KCGN++ +RN
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            FE +E +DVVSW +MI+ Y  +G   EALE+F +M   + + D ITLV  L+A S   +
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSM 534
           ++KG     + +   F +       + ++D+  R G L  A+ +   +    D  +W ++
Sbjct: 500 VEKGISYF-YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 558

Query: 535 INANGLHGR---GKVAIDLFYKMEAES 558
           + A+ +H     G+ A +  +++E E+
Sbjct: 559 LGASRIHRNPELGRSAAEKIFELEPEN 585



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 181/384 (47%), Gaps = 28/384 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +++A +LFD    R VFTW A++  Y  NG    +LE   R+       +A ++
Sbjct: 234 YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG----MLEEARRVFDAMPERNAVSW 289

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ A    + +D   ++  + + C   ++    N+++  YA+     +A+ +FD M +
Sbjct: 290 NAMVAAYIQRRMMDEAKELFNM-MPCRNVAS---WNTMLTGYAQAGMLEEAKAVFDTMPQ 345

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D V W ++++AYS  G   E L LF EM R G   N   F   L  C D +    GM+
Sbjct: 346 K-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQ 404

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +++G  +  +V NAL+AMY +CG M +A     ++E +D VSWN+M+ G+ ++  
Sbjct: 405 LHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGF 464

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ F  ++    KPD +  V  ++A    G +  G   + Y++   F      G T
Sbjct: 465 GKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS-YFYSMHHDF------GVT 517

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTII-AGYAQNNCHLKALELF 350
               +   C ++ +GR      A D +           W  ++ A     N  L      
Sbjct: 518 AKPEH-YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 576

Query: 351 RTVQLEGLDADVMIIGSVLMACSG 374
           +  +LE  +A + ++ S + A SG
Sbjct: 577 KIFELEPENAGMYVLLSNIYASSG 600



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 168/366 (45%), Gaps = 33/366 (9%)

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
           +V  +N  I  + R G++ +A  +   +  + + ++N+ML G+  N     A   FR + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI- 95

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
               +PD       + A     +L + + L      +  V D    N ++  +A    V+
Sbjct: 96  ---PRPDNYSYNTLLHALAVSSSLADARGL----FDEMPVRDSVTYNVMISSHANHGLVS 148

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT-VQLEGLDADVMIIGSVLMAC 372
                F     +D +SW  ++A Y +N    +A  LF +  + + +  + ++ G V    
Sbjct: 149 LARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWG- 207

Query: 373 SGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
                MS+ +E+     R    D+V  N +V  Y + G++  +R +F++   +DV +WT+
Sbjct: 208 ----KMSEAREL---FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTA 260

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           ++S Y  NG+  EA  +F  M E N    +++  + ++A     ++ + KEL        
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERN----AVSWNAMVAAYIQRRMMDEAKEL-------- 308

Query: 493 FNLEG--SVAS--SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           FN+    +VAS  +++  YA+ G L+ A  VF+ +  KD + W +M+ A    G  +  +
Sbjct: 309 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 368

Query: 549 DLFYKM 554
            LF +M
Sbjct: 369 QLFIEM 374



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++ DA   F+++ +R V +WN M+  Y  +G     LE +  MR      D  T
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDIT 486

Query: 61  FPCVIKACAMLKDLDCG-AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    ++ G +  + +    G  +       ++ +  +     +A  L   M
Sbjct: 487 LVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDM 546

Query: 120 GEKEDVVLWNSIISA 134
             + D  +W +++ A
Sbjct: 547 PFEPDSTMWGALLGA 561


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 227/601 (37%), Positives = 367/601 (61%), Gaps = 5/601 (0%)

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           F  NDL  +      +L+G+    D+      +        L+ G+ +HA+ ++  F  D
Sbjct: 37  FPSNDLLLRTSS--NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHD 94

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + +GNTL++MYAKC  +    +VF +M  +DF++WTT+I+GY+Q++    AL  F  +  
Sbjct: 95  IVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
            G   +   + SV+ A +  +      ++HG+ ++ G  S++ + +A++D+Y + G +D 
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           ++ VF+++ES++ VSW ++I+ +       +ALELF  M          +  S   A SS
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
              L++GK ++ ++I+ G  L     ++L+DMYA+ G++  A K+F+ +  +D++ W S+
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           + A   HG GK A+  F +M      P+ I+FL++L ACSHSGL++EG  + E+M+ D  
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-G 393

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P   HY  +VDLLGRA  L  A +F+  M IEPTA +W ALL ACR+H N ELG   A
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           + + ELDP +PG +V++ N++A+  +W D  +VR +M+ SG+KK P  SW+EI N IH F
Sbjct: 454 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 513

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           +A D+ H + +EI +K  E+  K+ +E GYV  T  V+ +V+++E+   L  HSE++A+A
Sbjct: 514 VANDERHPQREEIARKWEEVLAKI-KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 572

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           + +L +  GS I I KN+RVC DCH+  KL S++ GRE++VRD NRFHHF+ G CSC DY
Sbjct: 573 FALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDY 632

Query: 835 W 835
           W
Sbjct: 633 W 633



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 190/376 (50%), Gaps = 3/376 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A ++F+K+ QR   TW  ++  Y  +  P   L  +++M   G S + FT
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VIKA A  +   CG ++HG  +KCG+DS   + ++L+ +Y +      A+ +FD + 
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DV  WN++I+ ++      +AL LF+ M R G   + +++ +   AC  + F   G 
Sbjct: 224 SRNDVS-WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK 282

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KSG+ L  +  N L+ MYA+ G + +A  +  +L  +D VSWNS+LT + Q+ 
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 342

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+ +F E++  G +P+++  ++ ++A    G L  G   +    K G V +     
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV 402

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTII-AGYAQNNCHLKALELFRTVQLEGL 358
           T++D+  +   +N   R   +M  +   + W  ++ A     N  L A       +L+  
Sbjct: 403 TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPD 462

Query: 359 DADVMIIGSVLMACSG 374
           D    +I   + A  G
Sbjct: 463 DPGPHVILYNIYASGG 478



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 197/385 (51%), Gaps = 3/385 (0%)

Query: 54  ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           I  D   +  ++K C + K L  G  +H  +L+  +     + N+L+ MYAKC    +AR
Sbjct: 56  IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           ++F++M ++ D V W ++IS YS   +  +AL  F +M R G   N +T  + ++A    
Sbjct: 116 KVFEKMPQR-DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                G ++H   VK G +  V+V +AL+ +Y R G M +A  V   LE+++ VSWN+++
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            G  +     KA++ F+ +   G +P      +   A    G L  GK +HAY IK G  
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
                GNTL+DMYAK   ++   ++F ++  +D +SW +++  YAQ+    +A+  F  +
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
           +  G+  + +   SVL ACS    + +    +  + + G+  +      +VD+ G+ G++
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414

Query: 413 DYSRNVFESIESKDVVS-WTSMISS 436
           + +    E +  +   + W +++++
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNA 439


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 266/787 (33%), Positives = 441/787 (56%), Gaps = 24/787 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC---YDFRKARQLFDRMG 120
           ++++C  L  +   A +H  + +    ++ F+ NSL+A Y +         AR L D M 
Sbjct: 8   LLRSCTALPHV---AAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAAR-LIDEM- 62

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLG 179
            + + V +N +IS+YS +G    AL  F   +   GL  + +T+ AAL AC  +     G
Sbjct: 63  PRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTG 122

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +HA TV  G    V+++N+L +MYA CG+M EA  V    E  D VSWNS+L+G+V+ 
Sbjct: 123 KAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRA 182

Query: 240 DLYCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
               + ++ F  +   G G     + ++    ASG        + +H   +K G  +DL 
Sbjct: 183 GAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLF 242

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL------KALELFR 351
           + + ++DMYAK   +     +F  +   + I +  +IAG+ ++   +      +AL L+ 
Sbjct: 243 LASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYS 302

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
            +Q  G+        S+L AC+        K+IHG +++     D  I +A++D+Y   G
Sbjct: 303 EMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSG 362

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            ++     F S+  +D+V+WTSMIS  V N L  +AL LF       ++ D  T+ S ++
Sbjct: 363 CMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMN 422

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           A +SL++ + G+++    I+ GFN   ++ +S + M AR G +D   + F  ++++D++ 
Sbjct: 423 ACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVS 482

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W+++I+++  HG  + A+ +F +M     AP+ +TFL +L ACSH GL+++G ++ EIM+
Sbjct: 483 WSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMK 542

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
            +Y L P  +H  C+VDLLGRA  L +A  F+R       A VW +LL +CR+H + E G
Sbjct: 543 NEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERG 602

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
           ++VA ++++L+P +  +YV++ N++  + +     + R  M+  G+KK PG SWIE+ + 
Sbjct: 603 QLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSG 662

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE-EEKVQMLYG-HS 768
           +HSF+A DKSH ES+ IYKKLAE+  K+E+    +A T       +      Q L G HS
Sbjct: 663 VHSFVAGDKSHPESNAIYKKLAEMLSKIEK----LANTDNASTGSDGISSSEQNLVGCHS 718

Query: 769 ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
           E++A+A+G++   + + IR+ KNLRVC DCHS  KL+S    RE+++RD  RFHHF  G 
Sbjct: 719 EKIAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHHFRGGS 778

Query: 829 CSCGDYW 835
           CSCGDYW
Sbjct: 779 CSCGDYW 785



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 167/571 (29%), Positives = 298/571 (52%), Gaps = 18/571 (3%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAFTFPCV 64
           G+ L A +L D++ +R   ++N ++ +Y   G P R LET++R R   G+ VD FT+   
Sbjct: 50  GAPLHAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAA 109

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           + AC+   DL  G  +H + +  G  +  F+ NSL +MYA C +  +AR++FD   E +D
Sbjct: 110 LAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDD 169

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS--FETLGMEI 182
           V  WNS++S Y  +G   E L +F  M   GL  N++   + ++ C   S     +   +
Sbjct: 170 VS-WNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAV 228

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF------ 236
           H   VK+G +  +++A+A+I MYA+ G +T A  +   + + + + +N+M+ GF      
Sbjct: 229 HGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAA 288

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           V  ++  +A+  + E+Q  G +P +    + + A    G    GK++H   +K  F  D 
Sbjct: 289 VGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDD 348

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            IG+ L+D+Y+   C+    R F  +  QD ++WT++I+G  QN    KAL LF+     
Sbjct: 349 YIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICY 408

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYS 415
           GL  D+  + SV+ AC+ L      ++I    I+ G +    + N+ + +  + G++D  
Sbjct: 409 GLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAV 468

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
              F+ +ES+DVVSW+++ISS+  +G A +AL +F  M  A V  + +T ++ L+A S  
Sbjct: 469 TRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHG 528

Query: 476 SILKKGKELNGFIIRKGFNLEGSV--ASSLVDMYARCGAL-DIANKVFNCVQTKDLILWT 532
            ++  G      I++  + L  ++   + +VD+  R G L D    + +     D ++W 
Sbjct: 529 GLVDDGLRYYE-IMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWR 587

Query: 533 SMINANGLHG---RGKVAIDLFYKMEAESFA 560
           S++ +  +HG   RG++  D    +E  S A
Sbjct: 588 SLLASCRIHGDMERGQLVADQIMDLEPTSSA 618



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 250/508 (49%), Gaps = 36/508 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG + +A ++FD   +    +WN++L  YV  G     L+ +S M   G+  ++F 
Sbjct: 147 MYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFA 206

Query: 61  FPCVIKACAMLKDL--DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              +IK CA   D+       +HG V+K G D+  F+ ++++ MYAK      A  LF  
Sbjct: 207 LGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKS 266

Query: 119 MGEKEDVVLWNSIISAY----SASGQ--CLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           + +  +V+++N++I+ +    +A G+    EAL L+ EMQ  G+  + +TF + L+AC  
Sbjct: 267 VPDP-NVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNL 325

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
           +     G +IH   +K   +   Y+ +ALI +Y+  G M +       L  +D V+W SM
Sbjct: 326 AGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSM 385

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           ++G VQN+L+ KA++ F+E    G KPD     + ++A   L     G+++   AIK GF
Sbjct: 386 ISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGF 445

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
                +GN+ + M A+   V+ + R F +M ++D +SW+ +I+ +AQ+ C   AL +F  
Sbjct: 446 NRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNE 505

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL------------- 399
           +    +  + +   +VL ACS           HG ++  GL    I+             
Sbjct: 506 MMNAKVAPNEVTFLNVLTACS-----------HGGLVDDGLRYYEIMKNEYGLSPTIKHV 554

Query: 400 NAIVDVYGKCGNI-DYSRNVFESIESKDVVSWTSMISS-YVHNGLANEALELFYLMN-EA 456
             +VD+ G+ G + D    + +S    D V W S+++S  +H  +    L    +M+ E 
Sbjct: 555 TCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEP 614

Query: 457 NVESDSITLVSALSAASSLSILKKGKEL 484
              +  + L +    A  LS+  K ++L
Sbjct: 615 TSSASYVILYNMYLDAGELSLASKTRDL 642


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/801 (32%), Positives = 429/801 (53%), Gaps = 43/801 (5%)

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D++    +H  + K   D    + N+L+  Y K      A ++F  +    +VV + ++I
Sbjct: 87  DVELIKAVHASIFKLAEDI--HLANALIVAYLKLGMVPNAYKVFVGLS-CPNVVSYTAMI 143

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           S ++ S +  +A+ +F  M+  G+  N ++FVA L  C       LG ++HA  +K G  
Sbjct: 144 SGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFL 203

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
              +V+NAL+ +Y +CG +     +  ++ ++D  SWN++++  V+  +Y +A + FR++
Sbjct: 204 NYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDM 263

Query: 253 QGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           +   G + D       + A+  L +++ G+E+HA+ IK GF S++ + N L+  Y KC  
Sbjct: 264 RRIDGFRIDHFTLSTILVAARGLASMV-GREIHAHVIKIGFESNISVINALIRFYTKCGS 322

Query: 312 VNYMGRVFYQMTAQDFISWT-------------------------------TIIAGYAQN 340
           + ++  +F +M  +D I+WT                                I++G+ QN
Sbjct: 323 IKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQN 382

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
               KAL  F  +  EG++     +  VL AC  L     +K+IHG+I++ G  S+  I 
Sbjct: 383 GEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIE 442

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDV--VSWTSMISSYVHNGLANEALELFYLMN-EA 456
            A++D+  +CG +  ++ +F          + WTSMI  Y  N    EA+ LF     E 
Sbjct: 443 AALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEG 502

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +  D +   + L    +L+  + GK+++   ++ GF  +  V +S++ MY++C  +D A
Sbjct: 503 AMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDA 562

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH- 575
            KVFN +   D++ W  +I  + LH +G  A+ ++ KME     PD +TF+ ++ A  H 
Sbjct: 563 IKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHT 622

Query: 576 -SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
            S L++  ++    M+  Y +DP  EHY  LV +LG    LEEA + +  M IEP A VW
Sbjct: 623 NSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVW 682

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALL ACR+HSN  +G+  AK LL + P +P  Y+L+SN+++A  +W   + VR  MR  
Sbjct: 683 RALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVK 742

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           G +K PG SWI   NK+HSF ARDKSH ++ +I+  L  +  +  +  GYV  T FVLH 
Sbjct: 743 GFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLK-AGYVPDTSFVLHE 801

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           VEE +K   L+ HS ++A  YG+L +  G  IRI KN+ +C DCH+F K VS + GRE+ 
Sbjct: 802 VEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIF 861

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RDA+  H F  G CSC DYW
Sbjct: 862 LRDASGHHCFLNGQCSCKDYW 882



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 163/593 (27%), Positives = 292/593 (49%), Gaps = 58/593 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G V +A ++F  +S   V ++ AM+  +  +    + +E + RMR  GI ++ F+F
Sbjct: 115 YLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSF 174

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++  C  L DL+ G ++H +V+K G+ +  F+ N+L+ +Y KC       QLFD M  
Sbjct: 175 VAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPH 234

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLGM 180
           + D+  WN++IS+         A  LFR+M+R+ G   + +T    L A    +   +G 
Sbjct: 235 R-DIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA-SMVGR 292

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW----------- 229
           EIHA  +K G    + V NALI  Y +CG +     +  ++  +D ++W           
Sbjct: 293 EIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFG 352

Query: 230 --------------------NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
                               N++L+GF QN    KA+ FF  +   G +         ++
Sbjct: 353 LTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLN 412

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV--------FYQ 321
           A G L      K++H + +K GF S+  I   L+DM  +C      GR+           
Sbjct: 413 ACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRC------GRMADAQKMFSQGS 466

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQ 380
            +    I WT++I GYA+N    +A+ LF   QLEG +  D +   +VL  C  L     
Sbjct: 467 FSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEM 526

Query: 381 TKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
            K+IH + ++ G LSDL + N+I+ +Y KC N+D +  VF  + + D+VSW  +I+ ++ 
Sbjct: 527 GKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLL 586

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSA--ASSLSILKKGKELNGFIIRKG-FNLE 496
           +   +EAL ++  M +A ++ D++T V  +SA   ++ +++   + L  F+  K  ++++
Sbjct: 587 HRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRL--FLSMKTIYHID 644

Query: 497 GSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKV 546
            +V   +SLV +    G L+ A ++ N +  + +  +W ++++A  +H    +
Sbjct: 645 PTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTI 697



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 189/399 (47%), Gaps = 39/399 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           +YGKCG +    QLFD++  R + +WN ++ + V      R  E +  MR + G  +D F
Sbjct: 215 LYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHF 274

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++ A   L  +  G +IH  V+K G++S   ++N+L+  Y KC   +    LF++M
Sbjct: 275 TLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKM 333

Query: 120 GEKEDVVLW-------------------------------NSIISAYSASGQCLEALGLF 148
               DV+ W                               N+I+S +  +G+  +AL  F
Sbjct: 334 -RVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFF 392

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
             M   G+    +T    L AC       +  +IH   +K G      +  AL+ M  RC
Sbjct: 393 CRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRC 452

Query: 209 GKMTEAAGV--LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF--RELQGAGQKPDQVCT 264
           G+M +A  +          S+ W SM+ G+ +N    +A+  F   +L+GA    D+V +
Sbjct: 453 GRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGA-MVVDKVAS 511

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
              +   G L     GK++H +A+K GF+SDL +GN+++ MY+KC  ++   +VF  M A
Sbjct: 512 TAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPA 571

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
            D +SW  +IAG+  +    +AL ++  ++  G+  D +
Sbjct: 572 HDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTV 610



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 3/137 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC ++ DA ++F+ +    + +WN ++  ++ + +    L  +S+M   GI  D  T
Sbjct: 552 MYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVT 611

Query: 61  FPCVIKACAMLK-DLDCGAKIHGLVLKCGY--DSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           F  +I A      +L    +   L +K  Y  D T     SLV +        +A ++ +
Sbjct: 612 FVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMIN 671

Query: 118 RMGEKEDVVLWNSIISA 134
           +M  + +  +W +++ A
Sbjct: 672 KMPIEPEASVWRALLDA 688


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/656 (36%), Positives = 377/656 (57%), Gaps = 6/656 (0%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  V +G     +VA+AL  +Y    ++  A  V   + + D+V WN++L G   ++ 
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSE- 194

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
                 F R +     +PD     + + A+  + ++  G+ +H++A K G      +   
Sbjct: 195 --AVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTG 252

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ +Y+KC  V     +F  M   D +++  +I+GY+ N     ++ LF  +   GL  +
Sbjct: 253 LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPN 312

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
              + +++   S        + +HG++++ G + +  +  AI  ++ +  +++ +R  F+
Sbjct: 313 SSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFD 372

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
           ++  K + SW +MIS Y  NGL   A+ LF  M + NV  + IT+ S LSA + L  L  
Sbjct: 373 TMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSL 432

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK L+  I  +       V ++L+DMYA+CG++  A ++FN +  K+++ W +MI   GL
Sbjct: 433 GKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGL 492

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG+G  A+ L+  M      P   TFL++LYACSH GL+ EG K    M  DY ++P  E
Sbjct: 493 HGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIE 552

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAE-VWCALLGACRVHSNKELGEIVAKKLLE 659
           H  C+VDLLGRA  L+EA++ +           VW ALLGAC VH + +L ++ ++KL E
Sbjct: 553 HCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFE 612

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           LDP N G YVL+SN+  + +++ +   VR   +   L KTPG + IEIGNK H F+A D+
Sbjct: 613 LDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDR 672

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           +H +S+ IY  L ++T K+  E GY  +T+  L++VEEEEK  M+  HSE+LAIA+G+L 
Sbjct: 673 AHPQSEAIYSYLEKLTAKM-IEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLS 731

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +  G+ IRI KNLRVC+DCH+  K +S++  R +VVRDA+RFHHF  GVCSCGDYW
Sbjct: 732 TEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 214/434 (49%), Gaps = 29/434 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           +Y     V  A ++FD V       WN +L A +S  E    +E+++RM   G +  DA 
Sbjct: 158 LYFVLSRVDHARKVFDTVPSPDTVLWNTLL-AGLSGSE---AVESFARMVCDGSVRPDAT 213

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V+ A A + D+  G  +H    KCG    + ++  L+++Y+KC D   AR LFD M
Sbjct: 214 TLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMM 273

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK D+V +N++IS YS +G    ++ LF E+  +GL  N+ T VA +        + L 
Sbjct: 274 -EKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLA 332

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   +KSG      V+ A+  ++ R   M  A      +  K   SWN+M++G+ QN
Sbjct: 333 QCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQN 392

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L   A+  F ++     +P+ +   + +SA  +LG L  GK LH    ++    ++ + 
Sbjct: 393 GLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVM 452

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+DMYAKC  ++   R+F  M  ++ +SW  +IAGY  +    +AL+L++ +    LD
Sbjct: 453 TALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDM----LD 508

Query: 360 ADVMIIG----SVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------IVDVYGK 408
           A ++       SVL ACS    + +     G+ + + ++D   +N        +VD+ G+
Sbjct: 509 AHLLPTSATFLSVLYACSHGGLVEE-----GWKVFRSMTDDYAINPGIEHCTCMVDLLGR 563

Query: 409 CGNIDYSRNVFESI 422
            G +   +  FE I
Sbjct: 564 AGQL---KEAFELI 574



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 235/484 (48%), Gaps = 16/484 (3%)

Query: 40  LRVLETYSRMRVLGISVDAFTFPCVIKACAML-------KDLDCGAKIHGLVLKCGYDST 92
           LR L +  R R+L    D+F+F     + A L               +H L +  GY + 
Sbjct: 90  LRSLPSL-RPRLLFPCPDSFSFAFAATSLAALCSRGGGAASSSAARALHALAVAAGYAAD 148

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
            F+ ++L  +Y        AR++FD +    D VLWN++++  S S    EA+  F  M 
Sbjct: 149 TFVASALAKLYFVLSRVDHARKVFDTV-PSPDTVLWNTLLAGLSGS----EAVESFARMV 203

Query: 153 RVGLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
             G V  +A T  + L A  + +  T+G  +H+   K G     +V   LI++Y++CG +
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  +   +E  D V++N++++G+  N +   ++  F EL   G  P+    V  +   
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
              G+ L  + LH + +K GF ++  +   +  ++ +   +    + F  M  +   SW 
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
            +I+GYAQN     A+ LF  +    +  + + I S L AC+ L  +S  K +H  I  +
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEE 443

Query: 392 GL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
            L  ++ ++ A++D+Y KCG+I  +R +F ++++K+VVSW +MI+ Y  +G   EAL+L+
Sbjct: 444 DLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLY 503

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYAR 509
             M +A++   S T +S L A S   ++++G K           N      + +VD+  R
Sbjct: 504 KDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGR 563

Query: 510 CGAL 513
            G L
Sbjct: 564 AGQL 567


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/715 (33%), Positives = 407/715 (56%), Gaps = 7/715 (0%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
           ++NA++    + G    VL TYS M       DA TFP ++KAC  L     G   H  V
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           +  GY S  +I  SL+  Y+K    + AR++FD M ++ +VV W ++I  Y+ +G+   A
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDR-NVVPWTTMIGCYTRAGEHDVA 133

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME-IHAATVKSGQNLQVYVANALIA 203
             ++  M+R G+  ++ T +  L        E + ++ +HA  ++ G    V +AN+++ 
Sbjct: 134 FSMYNIMRRQGIQPSSVTMLGLLSGV----LELVHLQCLHACVIQYGFGSDVALANSMLN 189

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           +Y +CG++ +A  +   ++ +D +SWNS+++G+ Q     + +Q    ++  G +PDQ  
Sbjct: 190 VYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQT 249

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
             + VSA+     L  GK +H + ++ G   D  I  +L+ MY KC  VN   R+F  M 
Sbjct: 250 FGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMM 309

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
            +D ISWT +I+G  QN+C   A+ +FR +    +      I SVL AC+ L        
Sbjct: 310 HKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTS 369

Query: 384 IHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           +HGYI+R+ +  D+   N++V +Y KCG+++ S +VF+ +  +D+VSW +++S +  NG 
Sbjct: 370 VHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGH 429

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
             +AL LF  M +A    DSIT+VS L A +S+  L +GK ++ F+ +        + ++
Sbjct: 430 LCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTA 489

Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           LVDMY++CG L  A K F+ +  +DL+ W+S+I   G HG+G+ A+ ++         P+
Sbjct: 490 LVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPN 549

Query: 563 HITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV 622
           H+ +L++L ACSH+GL+++G  F   M  D+ ++P  EH AC+VDLL RA  +EEAY F 
Sbjct: 550 HVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFY 609

Query: 623 RSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWK 682
           + M  +P+ +V   LL ACR   N ELG+IVA++++ L P N GNYV +++ +A+ ++W 
Sbjct: 610 KRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWD 669

Query: 683 DVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
            V +V  +M+   LKK PG S+IE+   I +F     SH + +EI  ++  + ++
Sbjct: 670 GVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIIDRVLLLNKR 724



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 152/519 (29%), Positives = 267/519 (51%), Gaps = 10/519 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G    A ++FD +  R V  W  M+G Y   GE       Y+ MR  GI   + T 
Sbjct: 93  YSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTM 152

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++     L  L C   +H  V++ G+ S   + NS++ +Y KC     A+ LF+ M +
Sbjct: 153 LGLLSGVLELVHLQC---LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELM-D 208

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             DV+ WNS++S Y+  G   E L L   M+  G+  +  TF + + A    S   +G  
Sbjct: 209 ARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKM 268

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +++G     ++  +LI MY +CG +  A  +   + +KD +SW +M++G VQND 
Sbjct: 269 VHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDC 328

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
              A+  FR +  +   P      + ++A   LG+   G  +H Y ++Q    D+   N+
Sbjct: 329 ADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNS 388

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ MYAKC  +     VF +M+ +D +SW  I++G+AQN    KAL LF  ++      D
Sbjct: 389 LVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPD 448

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNVFE 420
            + + S+L AC+ +  + Q K IH ++ +  L   ++++ A+VD+Y KCG++  ++  F+
Sbjct: 449 SITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFD 508

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  +D+VSW+S+I+ Y  +G    AL ++       ++ + +  +S LSA S   ++ +
Sbjct: 509 RMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQ 568

Query: 481 GKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIA 516
           G  L+ F  + K F +E  +   + +VD+ +R G ++ A
Sbjct: 569 G--LSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEA 605



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 204/394 (51%), Gaps = 12/394 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V DA+ LF+ +  R V +WN+++  Y   G    VL+   RM+  GI  D  T
Sbjct: 190 VYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQT 249

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ A AM   L  G  +HG +L+ G +    I  SL+ MY KC +   A ++F+ M 
Sbjct: 250 FGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMM 309

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K DV+ W ++IS    +     A+ +FR M +  ++ +  T  + L AC +     LG 
Sbjct: 310 HK-DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGT 368

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   ++    L +   N+L+ MYA+CG + ++  V  ++  +D VSWN++++G  QN 
Sbjct: 369 SVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNG 428

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             CKA+  F E++ A Q+PD +  V+ + A   +G L  GK +H +  K      + I  
Sbjct: 429 HLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDT 488

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  +    + F +M  QD +SW++IIAGY  +     AL ++      G+  
Sbjct: 489 ALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQP 548

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           + +I  S+L ACS           H  ++ +GLS
Sbjct: 549 NHVIYLSILSACS-----------HNGLVDQGLS 571



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 198/398 (49%), Gaps = 7/398 (1%)

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           N  + S+N+++        +C  +  +  +      PD     + V A   L    +G  
Sbjct: 10  NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
            H   I  G+ SD  I  +L++ Y+K        +VF  M  ++ + WTT+I  Y +   
Sbjct: 70  FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNA 401
           H  A  ++  ++ +G+    + +  +L   SG+  +   + +H  +I+ G  SD+ + N+
Sbjct: 130 HDVAFSMYNIMRRQGIQPSSVTMLGLL---SGVLELVHLQCLHACVIQYGFGSDVALANS 186

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           +++VY KCG ++ ++ +FE ++++DV+SW S++S Y   G   E L+L   M    +E D
Sbjct: 187 MLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPD 246

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
             T  S +SAA+  S L  GK ++G I+R G   +  + +SL+ MY +CG ++ A ++F 
Sbjct: 247 QQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFE 306

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  KD+I WT+MI+    +    +A+ +F +M      P   T  ++L AC+  G    
Sbjct: 307 GMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPL 366

Query: 582 GKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
           G      I+R   +LD  P   + LV +  +  HLE++
Sbjct: 367 GTSVHGYILRQRIKLD-IPSQNS-LVTMYAKCGHLEQS 402


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/681 (35%), Positives = 379/681 (55%), Gaps = 7/681 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV--NSLVAMYAKCYDFRKARQLFDRMGE 121
           +++ C   + L     +HG +LK  + +   +V  N +   Y+KC D   A +LFD+M +
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + +   W  +I+  + +G  L+    F EMQ  G+  + + +   LQ C       LG  
Sbjct: 134 R-NTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNM 192

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  V  G     +V+ AL+ MYA+  ++ ++  V   +   + VSWN+M+TGF  NDL
Sbjct: 193 VHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDL 252

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           Y  A   F  + G G  PD    +    A G L ++   KE+  YA++ G  S+  +G  
Sbjct: 253 YLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTA 312

Query: 302 LMDMYAKCCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           L+DM +KC  +     +F  + +T +    W  +I+GY ++  + KALELF  +    + 
Sbjct: 313 LIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIY 372

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRN 417
            D     SV  A + LKC+S  K++H   I+ GL  + + I NA+ + Y KCG+++  R 
Sbjct: 373 LDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRK 432

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  +E +D++SWTS++++Y      ++A+E+F  M    +  +  T  S L + ++L +
Sbjct: 433 VFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCL 492

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L+ G++++G I + G +++  + S+LVDMYA+CG L  A KVFN +   D + WT++I  
Sbjct: 493 LEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAG 552

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
           +  HG    A+ LF +M      P+ +TFL +L+ACSH GL+ EG ++ ++M+  Y L P
Sbjct: 553 HAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVP 612

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHYAC+VDLL R  HL +A +F+  M +EP   VW  LLGACRVH N ELGE+ A+K+
Sbjct: 613 EMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKI 672

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           L     N   YVL+SN +  S  +KD   +R  M+  G+KK PG SWI +   +H F A 
Sbjct: 673 LSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAG 732

Query: 718 DKSHSESDEIYKKLAEITEKL 738
           D+ H E D+IY KL E+  KL
Sbjct: 733 DQQHPEKDKIYAKLEELKLKL 753



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 171/600 (28%), Positives = 320/600 (53%), Gaps = 18/600 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KC  +  A +LFD++SQR  F+W  ++     NG  L   E +  M+  GI  D F +
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             +++ C  L  ++ G  +H  ++  G+ S  F+  +L+ MYAK  +   + ++F+ M E
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             +VV WN++I+ ++++   L+A  LF  M   G+  +A TF+   +A           E
Sbjct: 235 V-NVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKE 293

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQN 239
           +    ++ G +    V  ALI M ++CG + EA  +   + +  + +  WN+M++G++++
Sbjct: 294 VSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRS 353

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQI 298
               KA++ F ++       D     +  +A   L  L  GK++HA AIK G  V+ + I
Sbjct: 354 GFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSI 413

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N + + YAKC  +  + +VF +M  +D ISWT+++  Y+Q +   KA+E+F  ++ EG+
Sbjct: 414 SNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGI 473

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             +     SVL++C+ L  +   +++HG I + GL  D  I +A+VD+Y KCG +  ++ 
Sbjct: 474 APNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKK 533

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  I + D VSWT++I+ +  +G+ ++AL+LF  M +  VE +++T +  L A S   +
Sbjct: 534 VFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGL 593

Query: 478 LKKGKELNGF-IIRKGFNL--EGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
           +++G  L  F +++K + L  E    + +VD+ +R G L+ A +  + +  + + ++W +
Sbjct: 594 VEEG--LQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQT 651

Query: 534 MINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           ++ A  +HG    G++A       +AE+ A    T++ L      SG   +G     +M+
Sbjct: 652 LLGACRVHGNVELGELAAQKILSFKAENSA----TYVLLSNTYIESGSYKDGLSLRHVMK 707



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 253/504 (50%), Gaps = 31/504 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   + D+ ++F+ +++  V +WNAM+  + SN   L   + + RM   G++ DA T
Sbjct: 215 MYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQT 274

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD--- 117
           F  V KA  ML+D++   ++ G  L+ G DS   +  +L+ M +KC   ++AR +F+   
Sbjct: 275 FIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHF 334

Query: 118 ---RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
              R         WN++IS Y  SG   +AL LF +M +  +  + YT+ +   A     
Sbjct: 335 ITCRFNAP-----WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALK 389

Query: 175 FETLGMEIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
             +LG ++HA  +KSG  +  V ++NA+   YA+CG + +   V  ++E++D +SW S++
Sbjct: 390 CLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLV 449

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           T + Q   + KA++ F  ++  G  P+Q    + + +   L  L  G+++H    K G  
Sbjct: 450 TAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLD 509

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            D  I + L+DMYAKC C+    +VF +++  D +SWT IIAG+AQ+     AL+LFR +
Sbjct: 510 MDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRM 569

Query: 354 QLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVY 406
              G++ + +    VL ACS       GL+     K+ +G +      ++     IVD+ 
Sbjct: 570 VQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLV-----PEMEHYACIVDLL 624

Query: 407 GKCGNIDYSRNVFE--SIESKDVVSWTSMISSYVHNG-----LANEALELFYLMNEANVE 459
            + G+++ +        +E  ++V  T + +  VH       LA + +  F   N A   
Sbjct: 625 SRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYV 684

Query: 460 SDSITLVSALSAASSLSILKKGKE 483
             S T + + S    LS+    KE
Sbjct: 685 LLSNTYIESGSYKDGLSLRHVMKE 708


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1028

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/732 (32%), Positives = 410/732 (56%), Gaps = 10/732 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G + DA  LF ++    V  WN M+  +   G  +  +E +  MR   +     T 
Sbjct: 271 YISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTL 330

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ A  ++ +LD G  +H   +K G  S  ++ +SLV+MY+KC     A ++F+ + E
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DV LWN++I  Y+ +G+  + + LF +M+  G   + +TF + L  C  S    +G +
Sbjct: 391 RNDV-LWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQ 449

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            H+  +K      ++V NAL+ MYA+CG + +A  +   + ++D+VSWN+++ G+VQ++ 
Sbjct: 450 FHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDEN 509

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A   F  +   G   D  C  + + A   +  L  GK++H  ++K G    L  G++
Sbjct: 510 ESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSS 569

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMY+KC  +    +VF  M     +S   +IAGY+QNN   +A+ LF+ +  +G++  
Sbjct: 570 LIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTKGVNPS 628

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD----LVILNAIVDVYGKCGNIDYSRN 417
            +   +++ AC   + ++   + HG II+ G S     L I  +++ +Y     +  +  
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGI--SLLGLYMNSRRMAEACA 686

Query: 418 VFESIES-KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           +F  + S K +V WT M+S +  NG   EAL+ +  M       D  T V+ L   S LS
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLS 746

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
            L++G+ ++  I     +L+   +++L+DMYA+CG +  +++VF+ ++ + +++ W S+I
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLI 806

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           N    +G  + A+ +F  M      PD ITFL +L ACSH+G +++G+K  E+M   Y +
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI 866

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           +   +H AC+VDLLGR  +L+EA  F+ +  ++P A +W +LLGACR+H +   GEI A+
Sbjct: 867 EARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAE 926

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           +L+EL+P N   YVL+SN++A+  +W++   +R  MR  G+KK PG SWI++G + H F 
Sbjct: 927 RLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFA 986

Query: 716 ARDKSHSESDEI 727
           A D+SHS+  +I
Sbjct: 987 AGDQSHSDIGKI 998



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 168/568 (29%), Positives = 307/568 (54%), Gaps = 13/568 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  A ++F+ + +R    WNAM+  Y  NGE  +V+E +  M+  G ++D FT
Sbjct: 371 MYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++  CA+  DL+ G++ H +++K       F+ N+LV MYAKC     ARQ+F+ M 
Sbjct: 431 FTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMC 490

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++++V  WN+II  Y       EA  LF  M   G+V++     + L+AC +      G 
Sbjct: 491 DRDNVS-WNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGK 549

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H  +VK G +  ++  ++LI MY++CG + +A  V   +     VS N+++ G+ QN+
Sbjct: 550 QVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNN 609

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ-IG 299
           L  +A+  F+E+   G  P ++     V A  +  +L  G + H   IK GF S+ + +G
Sbjct: 610 LE-EAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLG 668

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTA-QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            +L+ +Y     +     +F ++++ +  + WT +++G++QN  + +AL+ ++ ++ +G 
Sbjct: 669 ISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGA 728

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D     +VL  CS L  + + + IH  I       D +  N ++D+Y KCG++  S  
Sbjct: 729 LPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQ 788

Query: 418 VFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           VF+ +  + +VVSW S+I+ Y  NG A +AL++F  M ++++  D IT +  L+A S   
Sbjct: 789 VFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848

Query: 477 ILKKGKELNGFIIRKGFNLEGSV--ASSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
            +  G+++   +I + + +E  V   + +VD+  R G L  A+        K D  LW+S
Sbjct: 849 KVSDGRKIFEMMIGQ-YGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSS 907

Query: 534 MINANGLHG---RGKVAIDLFYKMEAES 558
           ++ A  +HG   RG++A +   ++E ++
Sbjct: 908 LLGACRIHGDDMRGEIAAERLIELEPQN 935



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 167/586 (28%), Positives = 293/586 (50%), Gaps = 39/586 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  V  AE+ F+ + ++ V  WN+ML  Y S G+P +VL ++  +    I  + FT
Sbjct: 104 LYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFT 162

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+   A   +++ G +IH  ++K G +   +   +LV MYAKC     A+++FD + 
Sbjct: 163 FSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIV 222

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  + V W  + S Y  +G   EA+ +F  M+  G   +   FV                
Sbjct: 223 DP-NTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVT--------------- 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                               +I  Y   GK+ +A  +  ++ + D V+WN M++G  +  
Sbjct: 267 --------------------VINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRG 306

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+++F  ++ +  K  +    + +SA G + NL  G  +HA AIK G  S++ +G+
Sbjct: 307 CEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MY+KC  +    +VF  +  ++ + W  +I GYA N    K +ELF  ++  G + 
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D     S+L  C+    +    + H  II+K L+ +L + NA+VD+Y KCG ++ +R +F
Sbjct: 427 DDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIF 486

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  +D VSW ++I  YV +   +EA +LF  MN   + SD   L S L A +++  L 
Sbjct: 487 EHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLY 546

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GK+++   ++ G +      SSL+DMY++CG ++ A KVF+ +    ++   ++I A  
Sbjct: 547 QGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALI-AGY 605

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
                + A+ LF +M  +   P  ITF  ++ AC     +  G +F
Sbjct: 606 SQNNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQF 651



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 262/553 (47%), Gaps = 39/553 (7%)

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
           L  G  +H   L  G DS   + N++V +YAKC     A + F+ +  ++DV  WNS++S
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL--EKDVTAWNSMLS 133

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
            YS+ GQ  + L  F  +    +  N +TF   L      +    G +IH + +K G   
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
             Y   AL+ MYA+C ++ +A  V   + + ++V W  + +G+V+  L  +A+  F  ++
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
           G G +PD +  V  ++    LG L + + L                              
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLL------------------------------ 283

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
                F +M + D ++W  +I+G+ +  C + A+E F  ++   + +    +GSVL A  
Sbjct: 284 -----FGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIG 338

Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            +  +     +H   I+ GL S++ + +++V +Y KC  ++ +  VFE++E ++ V W +
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNA 398

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MI  Y HNG +++ +ELF  M  +    D  T  S LS  +    L+ G + +  II+K 
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKK 458

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
                 V ++LVDMYA+CGAL+ A ++F  +  +D + W ++I           A DLF 
Sbjct: 459 LTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFM 518

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           +M +     D     + L AC++   + +GK+ +  +     LD      + L+D+  + 
Sbjct: 519 RMNSCGIVSDGACLASTLKACTNVHGLYQGKQ-VHCLSVKCGLDRVLHTGSSLIDMYSKC 577

Query: 613 NHLEEAYQFVRSM 625
             +E+A +   SM
Sbjct: 578 GIIEDARKVFSSM 590



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 9/164 (5%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L+ GK ++   +  G + EG + +++VD+YA+C  +  A K FN ++ KD+  W SM++ 
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSM 134

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
               G+    +  F  +      P+  TF  +L   +    +  G++    + C      
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQ----IHCSMIKMG 190

Query: 598 WPEHYAC---LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
              +  C   LVD+  + + L +A Q V    ++P    W  L 
Sbjct: 191 LERNSYCGGALVDMYAKCDRLGDA-QRVFDGIVDPNTVCWTCLF 233


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/712 (33%), Positives = 398/712 (55%), Gaps = 22/712 (3%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV- 96
           E + + ETY + +V  + +D      V++ CA    +     +HGLVLK  ++  D +V 
Sbjct: 51  ESIGISETYQQTQVQDL-ID------VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVL 103

Query: 97  -NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            N    +Y+KC +FR A  +FD M ++ +V  W  +I   +  G   +    F EM   G
Sbjct: 104 FNHAAHVYSKCSEFRAACGVFDEMPQR-NVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSG 162

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           ++ + + + A +Q+C       LG  +HA  V  G    ++V+ +L+ MYA+ G + ++ 
Sbjct: 163 ILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSY 222

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            V   +   + VSWN+M++G   N L+ +A   F  ++     P+    V+   A G+L 
Sbjct: 223 WVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLV 282

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS------ 329
           ++  GKE+   A + G   ++ +G  L+DMY+KC  ++    VF      +FI+      
Sbjct: 283 DVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVF----DTNFINCGVNTP 338

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W  +I+GY+Q+ C  +ALEL+  +   G+ +D+    SV  A +  K +   + +HG ++
Sbjct: 339 WNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 398

Query: 390 RKGLSDLVIL--NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           + GL  +V+   NAI D Y KCG ++  R VF+ +E +D+VSWT+++++Y  + L  EAL
Sbjct: 399 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 458

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
             F LM E     +  T  S L + +SL  L+ G++++G + + G + E  + S+L+DMY
Sbjct: 459 ATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMY 518

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           A+CG++  A KVF+ +   D++ WT++I+    HG  + A+ LF +ME      + +T L
Sbjct: 519 AKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLL 578

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
            +L+ACSH G++ EG  + + M   Y + P  EHYAC++DLLGR   L++A +F+R M +
Sbjct: 579 CVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPM 638

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
           EP   VW  LLG CRVH N ELGEI A+K+L + P     YVL+SN +  +  ++D   +
Sbjct: 639 EPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSL 698

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLE 739
           R  M+  G+KK PG SWI +  ++H F + D+ H +  EIY KL E+ EK++
Sbjct: 699 RNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 167/606 (27%), Positives = 309/606 (50%), Gaps = 28/606 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC     A  +FD++ QR VF+W  M+     +G      + +  M   GI  D F 
Sbjct: 110 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 169

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +I++C  L  L+ G  +H  ++  G+ +  F+  SL+ MYAK      +  +F+ M 
Sbjct: 170 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 229

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E   V  WN++IS  +++G  LEA  LF  M+      N YT V+  +A        +G 
Sbjct: 230 EHNQVS-WNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGK 288

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ--LENKDSVSWNSMLTGFVQ 238
           E+     + G    V V  ALI MY++CG + +A  V     +    +  WN+M++G+ Q
Sbjct: 289 EVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 348

Query: 239 NDLYCKAMQFFRELQGAGQKPD--QVCTV-NAVSASGRLGNLLNGKELHAYAIKQGF-VS 294
           +    +A++ + ++   G   D    C+V NA++AS    +L  G+ +H   +K G  + 
Sbjct: 349 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAAS---KSLQFGRVVHGMVLKCGLDLM 405

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
            + + N + D Y+KC  +  + +VF +M  +D +SWTT++  Y+Q++   +AL  F  ++
Sbjct: 406 VVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMR 465

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
            EG   +     SVL++C+ L  +   +++HG + + GL ++  I +A++D+Y KCG+I 
Sbjct: 466 EEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSIT 525

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  VF+ I + D+VSWT++IS Y  +GL  +AL+LF  M  + ++++++TL+  L A S
Sbjct: 526 EAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS 585

Query: 474 SLSILKKG-----KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-D 527
              ++++G     +  +G+    G   E    + ++D+  R G LD A +    +  + +
Sbjct: 586 HGGMVEEGLFYFQQMEDGY----GVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPN 641

Query: 528 LILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            ++W +++    +HG    G++A      +  E  A    T++ L      +G   +G  
Sbjct: 642 EMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSA----TYVLLSNTYIETGSYEDGLS 697

Query: 585 FLEIMR 590
              +M+
Sbjct: 698 LRNVMK 703


>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
 gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
          Length = 650

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/567 (39%), Positives = 369/567 (65%), Gaps = 8/567 (1%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +LL+ + +H + ++ GF  D  +   L++MY+    ++   +VF +   +    +  +  
Sbjct: 85  SLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFR 144

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC----MSQTKEIHGYIIRK 391
             +      + L ++R +   G+ +D      VL AC   +C    +++ +EIH +I+R 
Sbjct: 145 ALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRH 204

Query: 392 GLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           G    V I+  +VD+Y K G +  +  VF  +  K+VVSW++MI+ Y  NG A EALELF
Sbjct: 205 GYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELF 264

Query: 451 --YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
              ++   ++  +S+T+VS L A ++L+ L++G+ ++G+I+RKG +    V S+LV MYA
Sbjct: 265 RELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYA 324

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           RCG L++  +VF+ +  +D++ W S+I++ G+HG GK AI +F +M      P  I+F++
Sbjct: 325 RCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVS 384

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L ACSH+GL++EGK     M   + + P  EHYAC+VDLLGRAN LEEA + + +M+IE
Sbjct: 385 VLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIE 444

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
           P  +VW +LLG+CR+H N EL E  + +L +L+P N GNYVL+++++A +  W  V++V+
Sbjct: 445 PGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVK 504

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
             +   GL+K PG SWIE+  KI+SF++ D+ +   ++++  L +++ +L+ E GYV QT
Sbjct: 505 KLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEE-GYVPQT 563

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
           + VL++++  EK +++ GHSE+LA+A+G++ S++G +IRITK+LR+C DCHSF K +S+ 
Sbjct: 564 KVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKF 623

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
             +E++VRD NRFHHF  GVCSCGDYW
Sbjct: 624 ANKEILVRDVNRFHHFRDGVCSCGDYW 650



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 216/424 (50%), Gaps = 17/424 (4%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNA--YTFVAALQACEDSSFETLGMEIHAAT 186
           N +I +    G   +AL L      + L  N   +T+   + +C   +       +H   
Sbjct: 43  NKLIQSLCKQGNLTQALEL------LSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHL 96

Query: 187 VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAM 246
           +++G +   ++A  LI MY+    +  A  V  +  N+    +N++           + +
Sbjct: 97  LENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVL 156

Query: 247 QFFRELQGAGQKPDQVC---TVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIGNTL 302
             +R +   G   D+      + A  AS    +LLN G+E+HA+ ++ G+   + I  TL
Sbjct: 157 NMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTL 216

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD--A 360
           +DMYAK  CV+    VF QM  ++ +SW+ +IA YA+N    +ALELFR + LE  D   
Sbjct: 217 VDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCP 276

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           + + + SVL AC+ L  + Q + IHGYI+RKGL S L +++A+V +Y +CG ++  + VF
Sbjct: 277 NSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVF 336

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + ++ +DVVSW S+ISSY  +G   +A+ +F  M    VE   I+ VS L A S   ++ 
Sbjct: 337 DQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVD 396

Query: 480 KGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMINA 537
           +GK L N   +  G        + +VD+  R   L+ A K+   ++ +    +W S++ +
Sbjct: 397 EGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGS 456

Query: 538 NGLH 541
             +H
Sbjct: 457 CRIH 460



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 200/387 (51%), Gaps = 12/387 (3%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+  +I +C     L    ++H  +L+ G+D   F+   L+ MY+       AR++FD+ 
Sbjct: 72  TYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKT 131

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS----SF 175
             +  + ++N++  A S +G   E L ++R M  +G+ ++ +T+   L+AC  S    S 
Sbjct: 132 RNR-TIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSL 190

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G EIHA  ++ G +  V++   L+ MYA+ G ++ A+ V  Q+  K+ VSW++M+  
Sbjct: 191 LNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIAC 250

Query: 236 FVQNDLYCKAMQFFRELQGAGQK--PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           + +N    +A++ FREL    Q   P+ V  V+ + A   L  L  G+ +H Y +++G  
Sbjct: 251 YAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLD 310

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S L + + L+ MYA+C  +    RVF QM  +D +SW ++I+ Y  +    KA+ +F  +
Sbjct: 311 SILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEM 370

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI-IRKGLSDLVILNA-IVDVYGKCGN 411
              G++   +   SVL ACS    + + K +   + +  G+   V   A +VD+ G+   
Sbjct: 371 TYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANR 430

Query: 412 IDYSRNVFES--IESKDVVSWTSMISS 436
           ++ +  + E+  IE    V W S++ S
Sbjct: 431 LEEAAKIIENMRIEPGPKV-WGSLLGS 456



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 198/385 (51%), Gaps = 12/385 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY    S+ +A ++FDK   RT++ +NA+  A    G    VL  Y RM  +GI  D FT
Sbjct: 114 MYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFT 173

Query: 61  FPCVIKACA----MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           +  V+KAC      +  L+ G +IH  +L+ GYD    I+ +LV MYAK      A  +F
Sbjct: 174 YTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVF 233

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACEDSS 174
           ++M  K +VV W+++I+ Y+ +G+  EAL LFRE+  +   L  N+ T V+ LQAC   +
Sbjct: 234 NQMPVK-NVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALA 292

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  IH   ++ G +  + V +AL+ MYARCGK+     V  Q++ +D VSWNS+++
Sbjct: 293 ALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLIS 352

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-HAYAIKQGFV 293
            +  +    KA+  F E+   G +P  +  V+ + A    G +  GK L ++  +  G  
Sbjct: 353 SYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGIC 412

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAGYAQNNCHLKALEL--F 350
             ++    ++D+  +   +    ++   M  +     W +++ G  + +C+++  E    
Sbjct: 413 PSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLL-GSCRIHCNVELAERASI 471

Query: 351 RTVQLEGLDADVMIIGSVLMACSGL 375
           R   LE  +A   ++ + + A +G+
Sbjct: 472 RLFDLEPTNAGNYVLLADIYAEAGM 496


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/681 (35%), Positives = 379/681 (55%), Gaps = 7/681 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV--NSLVAMYAKCYDFRKARQLFDRMGE 121
           +++ C   + L     +HG +LK  + +   +V  N +   Y+KC D   A +LFD+M +
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + +   W  +I+  + +G  L+    F EMQ  G+  + + +   LQ C       LG  
Sbjct: 134 R-NTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNM 192

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  V  G     +V+ AL+ MYA+  ++ ++  V   +   + VSWN+M+TGF  NDL
Sbjct: 193 VHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDL 252

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           Y  A   F  + G G  PD    +    A G L ++   KE+  YA++ G  S+  +G  
Sbjct: 253 YLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTA 312

Query: 302 LMDMYAKCCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           L+DM +KC  +     +F  + +T +    W  +I+GY ++  + KALELF  +    + 
Sbjct: 313 LIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIY 372

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRN 417
            D     SV  A + LKC+S  K++H   I+ GL  + + I NA+ + Y KCG+++  R 
Sbjct: 373 LDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRK 432

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  +E +D++SWTS++++Y      ++A+E+F  M    +  +  T  S L + ++L +
Sbjct: 433 VFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCL 492

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L+ G++++G I + G +++  + S+LVDMYA+CG L  A KVFN +   D + WT++I  
Sbjct: 493 LEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAG 552

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
           +  HG    A+ LF +M      P+ +TFL +L+ACSH GL+ EG ++ ++M+  Y L P
Sbjct: 553 HAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVP 612

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHYAC+VDLL R  HL +A +F+  M +EP   VW  LLGACRVH N ELGE+ A+K+
Sbjct: 613 EMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKI 672

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           L     N   YVL+SN +  S  +KD   +R  M+  G+KK PG SWI +   +H F A 
Sbjct: 673 LSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAG 732

Query: 718 DKSHSESDEIYKKLAEITEKL 738
           D+ H E D+IY KL E+  KL
Sbjct: 733 DQQHPEKDKIYAKLEELKLKL 753



 Score =  262 bits (670), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 171/600 (28%), Positives = 320/600 (53%), Gaps = 18/600 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KC  +  A +LFD++SQR  F+W  ++     NG  L   E +  M+  GI  D F +
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             +++ C  L  ++ G  +H  ++  G+ S  F+  +L+ MYAK  +   + ++F+ M E
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             +VV WN++I+ ++++   L+A  LF  M   G+  +A TF+   +A           E
Sbjct: 235 V-NVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKE 293

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQN 239
           +    ++ G +    V  ALI M ++CG + EA  +   + +  + +  WN+M++G++++
Sbjct: 294 VSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRS 353

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQI 298
               KA++ F ++       D     +  +A   L  L  GK++HA AIK G  V+ + I
Sbjct: 354 GFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSI 413

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N + + YAKC  +  + +VF +M  +D ISWT+++  Y+Q +   KA+E+F  ++ EG+
Sbjct: 414 SNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGI 473

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             +     SVL++C+ L  +   +++HG I + GL  D  I +A+VD+Y KCG +  ++ 
Sbjct: 474 APNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKK 533

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  I + D VSWT++I+ +  +G+ ++AL+LF  M +  VE +++T +  L A S   +
Sbjct: 534 VFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGL 593

Query: 478 LKKGKELNGF-IIRKGFNL--EGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
           +++G  L  F +++K + L  E    + +VD+ +R G L+ A +  + +  + + ++W +
Sbjct: 594 VEEG--LQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQT 651

Query: 534 MINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           ++ A  +HG    G++A       +AE+ A    T++ L      SG   +G     +M+
Sbjct: 652 LLGACRVHGNVELGELAAQKILSFKAENSA----TYVLLSNTYIESGSYKDGLSLRHLMK 707



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 253/504 (50%), Gaps = 31/504 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   + D+ ++F+ +++  V +WNAM+  + SN   L   + + RM   G++ DA T
Sbjct: 215 MYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQT 274

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD--- 117
           F  V KA  ML+D++   ++ G  L+ G DS   +  +L+ M +KC   ++AR +F+   
Sbjct: 275 FIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHF 334

Query: 118 ---RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
              R         WN++IS Y  SG   +AL LF +M +  +  + YT+ +   A     
Sbjct: 335 ITCRFNAP-----WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALK 389

Query: 175 FETLGMEIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
             +LG ++HA  +KSG  +  V ++NA+   YA+CG + +   V  ++E++D +SW S++
Sbjct: 390 CLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLV 449

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           T + Q   + KA++ F  ++  G  P+Q    + + +   L  L  G+++H    K G  
Sbjct: 450 TAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLD 509

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            D  I + L+DMYAKC C+    +VF +++  D +SWT IIAG+AQ+     AL+LFR +
Sbjct: 510 MDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRM 569

Query: 354 QLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVY 406
              G++ + +    VL ACS       GL+     K+ +G +      ++     IVD+ 
Sbjct: 570 VQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLV-----PEMEHYACIVDLL 624

Query: 407 GKCGNIDYSRNVFE--SIESKDVVSWTSMISSYVHNG-----LANEALELFYLMNEANVE 459
            + G+++ +        +E  ++V  T + +  VH       LA + +  F   N A   
Sbjct: 625 SRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYV 684

Query: 460 SDSITLVSALSAASSLSILKKGKE 483
             S T + + S    LS+    KE
Sbjct: 685 LLSNTYIESGSYKDGLSLRHLMKE 708


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 259/841 (30%), Positives = 429/841 (51%), Gaps = 82/841 (9%)

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           +++C     L     +HG ++  G  S  F+ N+L+  Y  C     AR+L     ++ +
Sbjct: 27  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVG------LVTNAYTFVAALQACEDSSFETL 178
           V+  N +++ Y+  G   +A  LF  M R        L+++      +  +C       L
Sbjct: 87  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN--------------- 223
             ++     K        V  AL+ M+ RCG +  A+ +  Q+E                
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAK 206

Query: 224 ----------------KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
                           +D VSWN M+    Q+    +A+    E+   G + D     ++
Sbjct: 207 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 266

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           ++A  RL +L  GK+LHA  I+     D  + + L+++YAKC       RVF  +  ++ 
Sbjct: 267 LTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNS 326

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SWT +I G  Q  C  K++ELF  ++ E +  D   + +++  C     +   +++H  
Sbjct: 327 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 386

Query: 388 IIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY--------- 437
            ++ G +  +V+ N+++ +Y KCG++  +  VF S+  +D+VSWTSMI++Y         
Sbjct: 387 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKA 446

Query: 438 ----------------------VHNGLANEALELFY-LMNEANVESDSITLVSALSAASS 474
                                 + +G   + L+++  ++++ +V  D +T V+     + 
Sbjct: 447 REFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCAD 506

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           +   K G ++ G  ++ G  L  SVA++ + MY++CG +  A K+F+ +  KD++ W +M
Sbjct: 507 IGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAM 566

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I     HG GK A   F  M ++   PD+I+++A+L  CSHSGL+ EGK + ++M   + 
Sbjct: 567 ITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHG 626

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  EH++C+VDLLGRA HL EA   +  M ++PTAEVW ALL AC++H N EL E+ A
Sbjct: 627 ISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAA 686

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           K + ELD  + G+Y+L++ +++ + K  D  QVR  MR  G+KK PG SW+E+ NK+H F
Sbjct: 687 KHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVF 746

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
            A D SH +   I  K+ E+ EK+    GYV             E  +    HSE+LA+A
Sbjct: 747 KADDVSHPQVIAIRNKMDELMEKIAHL-GYV-----------RTESPRSEIHHSEKLAVA 794

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G++       I I KNLR+C DCH+  KL+S +  RE V+RD  RFHHF++G CSCGDY
Sbjct: 795 FGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDY 854

Query: 835 W 835
           W
Sbjct: 855 W 855



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 176/636 (27%), Positives = 310/636 (48%), Gaps = 55/636 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K GS+ DAE+LFD++ +R V +WN ++       +  R   ++     LG    A   
Sbjct: 97  YAKQGSLSDAEELFDRMPRRDVASWNTLM------SDTSRPAGSWMSCGALGCRELAPQL 150

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGY------------DSTDFIVNSLVAMYAKCYDF 109
             +        D D    +  + ++CGY              T F  NS++A YAK Y  
Sbjct: 151 LGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGI 210

Query: 110 RKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA 169
             A + F+ M E+ DVV WN +I+A S SG+  EALGL  EM R G+  ++ T+ ++L A
Sbjct: 211 DHAIEYFEDMAER-DVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTA 269

Query: 170 CEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
           C        G ++HA  ++S   +  YVA+ALI +YA+CG   EA  V   L++++SVSW
Sbjct: 270 CARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW 329

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
             ++ G +Q + + K+++ F +++      DQ      +S      +L  G++LH+  +K
Sbjct: 330 TVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLK 389

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
            G    + + N+L+ +YAKC  +     VF  M+ +D +SWT++I  Y+Q    +KA E 
Sbjct: 390 SGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREF 449

Query: 350 FRTVQL---------------EGLDADVMIIGSVLMA-----------------CSGLKC 377
           F  +                  G + D + + S +++                 C+ +  
Sbjct: 450 FDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGA 509

Query: 378 MSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
                +I G+ ++ GL  ++ + NA + +Y KCG I  ++ +F+ +  KDVVSW +MI+ 
Sbjct: 510 NKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITG 569

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNL 495
           Y  +G+  +A + F  M     + D I+ V+ LS  S   ++++GK     + R  G + 
Sbjct: 570 YSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISP 629

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGRGKVAIDLFYKM 554
                S +VD+  R G L  A  + + +  K    +W ++++A  +HG  ++A +L  K 
Sbjct: 630 GLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA-ELAAKH 688

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
             E  +PD  +++ L    S +G  ++  +  ++MR
Sbjct: 689 VFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMR 724



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 176/360 (48%), Gaps = 41/360 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCGS  +A+++F+ +  R   +W  ++G  +      + +E +++MR   +++D F 
Sbjct: 304 LYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFA 363

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +I  C    DL  G ++H L LK G++    + NSL+++YAKC D + A  +F  M 
Sbjct: 364 LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS 423

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-----NAY-------------- 161
           E+ D+V W S+I+AYS  G  ++A   F  M     +T      AY              
Sbjct: 424 ER-DIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYS 482

Query: 162 -------------TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
                        T+V   + C D     LG +I   TVK+G  L V VANA I MY++C
Sbjct: 483 AMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKC 542

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G+++EA  +   L  KD VSWN+M+TG+ Q+ +  +A + F ++   G KPD +  V  +
Sbjct: 543 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 602

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           S     G +  GK    Y      V  +  G   ++ ++  C V+ +GR  +   A+D I
Sbjct: 603 SGCSHSGLVQEGK---LYFDMMTRVHGISPG---LEHFS--CMVDLLGRAGHLTEAKDLI 654



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A++LFD ++ + V +WNAM+  Y  +G   +  +T+  M   G   D  +
Sbjct: 538 MYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYIS 597

Query: 61  FPCVIKACA---MLKD----LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           +  V+  C+   ++++     D   ++HG+     + S       +V +  +     +A+
Sbjct: 598 YVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSC------MVDLLGRAGHLTEAK 651

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
            L D+M  K    +W +++SA
Sbjct: 652 DLIDKMPMKPTAEVWGALLSA 672


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/739 (34%), Positives = 398/739 (53%), Gaps = 56/739 (7%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N+++A Y+       A  LF R   + D   +N+++ A + S    +A GLF EM     
Sbjct: 73  NAMLAGYSANGRLPLAASLF-RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMP---- 127

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           V ++ T+   + +  +    +L    H   +   ++   +  N ++A Y R G++ EA G
Sbjct: 128 VRDSVTYNVMISSHANHGLVSLAR--HYFDLAPEKDAVSW--NGMLAAYVRNGRVEEARG 183

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           +       D +SWN++++G+VQ     +A + F  + G     D V     VS   R G+
Sbjct: 184 LFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGD 239

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           ++  + L   A     V D+     ++  YA+   +    RVF  M  ++ +SW  ++A 
Sbjct: 240 MVEARRLFDAAP----VRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAA 295

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL 396
           Y Q     +A ELF                  +M C                      ++
Sbjct: 296 YIQRRMMDEAKELFN-----------------MMPCR---------------------NV 317

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
              N ++  Y + G ++ ++ VF+++  KD VSW +M+++Y   G + E L+LF  M   
Sbjct: 318 ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 377

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
               +       LS  + ++ L+ G +L+G +IR G+ +   V ++L+ MY +CG ++ A
Sbjct: 378 GEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDA 437

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
              F  ++ +D++ W +MI     HG GK A+++F  M   S  PD IT + +L ACSHS
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHS 497

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           GL+ +G  +   M  D+ +   PEHY C++DLLGRA  L EA+  ++ M  EP + +W A
Sbjct: 498 GLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 557

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LLGA R+H N ELG   A+K+ EL+P N G YVL+SN++A+S KW+D  ++R+ M   G+
Sbjct: 558 LLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 617

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           KK PG SWIE+ NK+H+F A D  H E ++IY  L ++  ++ ++ GYV+ T  VLH+VE
Sbjct: 618 KKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRM-KKAGYVSATDMVLHDVE 676

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EEEK  ML  HSE+LA+AYG+L    G  IR+ KNLRVC DCH+  K +S + GR +++R
Sbjct: 677 EEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLR 736

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D+NRFHHF  G CSCGDYW
Sbjct: 737 DSNRFHHFRGGSCSCGDYW 755



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 268/567 (47%), Gaps = 43/567 (7%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           + G V DAE+LF  + +R+  T+NAML  Y +NG   R+    S  R +    D +++  
Sbjct: 50  RAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG---RLPLAASLFRAIP-RPDNYSYNT 105

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGY-DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           ++ A A+   L   A   GL  +    DS  +  N +++ +A       AR  FD   EK
Sbjct: 106 LLHALAVSSSL---ADARGLFDEMPVRDSVTY--NVMISSHANHGLVSLARHYFDLAPEK 160

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D V WN +++AY  +G+  EA GLF       +++        +Q  + S    L   +
Sbjct: 161 -DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRM 219

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
               V S         N +++ YAR G M EA  +      +D  +W ++++G+ QN + 
Sbjct: 220 PGRDVVSW--------NIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGML 271

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF----VSDLQI 298
            +A + F          D +   NAVS +  +   +  + +     K+ F      ++  
Sbjct: 272 EEARRVF----------DAMPERNAVSWNAMVAAYIQRRMMD--EAKELFNMMPCRNVAS 319

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            NT++  YA+   +     VF  M  +D +SW  ++A Y+Q  C  + L+LF  +   G 
Sbjct: 320 WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             +      VL  C+ +  +    ++HG +IR G      + NA++ +Y KCGN++ +RN
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            FE +E +DVVSW +MI+ Y  +G   EALE+F +M   + + D ITLV  L+A S   +
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSM 534
           ++KG     + +   F +       + ++D+  R G L  A+ +   +    D  +W ++
Sbjct: 500 VEKGISYF-YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 558

Query: 535 INANGLHGR---GKVAIDLFYKMEAES 558
           + A+ +H     G+ A +  +++E E+
Sbjct: 559 LGASRIHRNPELGRSAAEKIFELEPEN 585



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 181/384 (47%), Gaps = 28/384 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +++A +LFD    R VFTW A++  Y  NG    +LE   R+       +A ++
Sbjct: 234 YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG----MLEEARRVFDAMPERNAVSW 289

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ A    + +D   ++  + + C   ++    N+++  YA+     +A+ +FD M +
Sbjct: 290 NAMVAAYIQRRMMDEAKELFNM-MPCRNVAS---WNTMLTGYAQAGMLEEAKAVFDTMPQ 345

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D V W ++++AYS  G   E L LF EM R G   N   F   L  C D +    GM+
Sbjct: 346 K-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQ 404

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +++G  +  +V NAL+AMY +CG M +A     ++E +D VSWN+M+ G+ ++  
Sbjct: 405 LHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGF 464

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ F  ++    KPD +  V  ++A    G +  G   + Y++   F      G T
Sbjct: 465 GKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS-YFYSMHHDF------GVT 517

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTII-AGYAQNNCHLKALELF 350
               +   C ++ +GR      A D +           W  ++ A     N  L      
Sbjct: 518 AKPEH-YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 576

Query: 351 RTVQLEGLDADVMIIGSVLMACSG 374
           +  +LE  +A + ++ S + A SG
Sbjct: 577 KIFELEPENAGMYVLLSNIYASSG 600



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 167/365 (45%), Gaps = 31/365 (8%)

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
           +V  +N  I  + R G++ +A  +   +  + + ++N+ML G+  N     A   FR + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI- 95

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
               +PD       + A     +L + + L      +  V D    N ++  +A    V+
Sbjct: 96  ---PRPDNYSYNTLLHALAVSSSLADARGL----FDEMPVRDSVTYNVMISSHANHGLVS 148

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
                F     +D +SW  ++A Y +N    +A  LF +      + DV+   +++    
Sbjct: 149 LARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT----EWDVISWNALMSGYV 204

Query: 374 GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
               MS+ +E+     R    D+V  N +V  Y + G++  +R +F++   +DV +WT++
Sbjct: 205 QWGKMSEAREL---FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAV 261

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           +S Y  NG+  EA  +F  M E N    +++  + ++A     ++ + KEL        F
Sbjct: 262 VSGYAQNGMLEEARRVFDAMPERN----AVSWNAMVAAYIQRRMMDEAKEL--------F 309

Query: 494 NLEG--SVAS--SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           N+    +VAS  +++  YA+ G L+ A  VF+ +  KD + W +M+ A    G  +  + 
Sbjct: 310 NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQ 369

Query: 550 LFYKM 554
           LF +M
Sbjct: 370 LFIEM 374



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++ DA   F+++ +R V +WN M+  Y  +G     LE +  MR      D  T
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDIT 486

Query: 61  FPCVIKACAMLKDLDCG-AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    ++ G +  + +    G  +       ++ +  +     +A  L   M
Sbjct: 487 LVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDM 546

Query: 120 GEKEDVVLWNSIISA 134
             + D  +W +++ A
Sbjct: 547 PFEPDSTMWGALLGA 561


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/561 (39%), Positives = 351/561 (62%), Gaps = 5/561 (0%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G+ +H + I+  F  DL + NTL++MYAKC  +    +VF +M  +DF++WTT+I+G
Sbjct: 67  LTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISG 126

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SD 395
           Y+Q++    AL LF  +   G   +   + SV+ A +  +      ++HG+ ++ G  S+
Sbjct: 127 YSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 186

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + + +A++D+Y + G +D ++ VF+++ES++ VSW ++I+ +       +ALELF  M  
Sbjct: 187 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLR 246

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
                   +  S   A SS   L++GK ++ ++I+ G  L     ++L+DMYA+ G++  
Sbjct: 247 EGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHD 306

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A K+F+ +  +D++ W S++ A   HG G  A+  F +M      P+ I+FL++L ACSH
Sbjct: 307 ARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSH 366

Query: 576 SGLINEGKKFLEIMRCD-YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           SGL++EG  + E+M+ D   L+ W  HY  +VDLLGRA  L  A +F+  M IEPTA +W
Sbjct: 367 SGLLDEGWHYYELMKKDGIVLEAW--HYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIW 424

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALL ACR+H N ELG   A+ + ELDP +PG +V++ N++A+  +W D  +VR +M+ S
Sbjct: 425 KALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKES 484

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           G+KK P  SW+EI N IH F+A D+ H + +EI +K  E+  K+ +E GYV  T  V+ +
Sbjct: 485 GVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI-KELGYVPDTSHVIVH 543

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           V+++E+   L  HSE++A+A+ +L +  GS I I KN+RVC DCHS  KL S+  GRE++
Sbjct: 544 VDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREII 603

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           VRD NRFHHF+ G CSC DYW
Sbjct: 604 VRDTNRFHHFKDGACSCKDYW 624



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 203/389 (52%), Gaps = 11/389 (2%)

Query: 54  ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           I VD   +  ++K C + K L  G  +HG +++  +     + N+L+ MYAKC    +AR
Sbjct: 47  IPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEAR 106

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           ++FD+M E+ D V W ++IS YS   +  +AL LF +M R G   N +T  + ++A    
Sbjct: 107 KVFDKMPER-DFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAE 165

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                G ++H   VK G +  V+V +AL+ +Y R G M +A  V   LE+++ VSWN+++
Sbjct: 166 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 225

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            G  +     KA++ F+ +   G +P      +   A    G L  GK +HAY IK G  
Sbjct: 226 AGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 285

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
                GNTL+DMYAK   ++   ++F ++  +D +SW +++  YAQ+    +A+  F  +
Sbjct: 286 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEM 345

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-----IVDVYGK 408
           +  G+  + +   SVL ACS    + +    H Y + K   D ++L A     IVD+ G+
Sbjct: 346 RRGGIRPNEISFLSVLTACSHSGLLDEG--WHYYELMK--KDGIVLEAWHYVTIVDLLGR 401

Query: 409 CGNIDYSRNVFESIESKDVVS-WTSMISS 436
            G+++ +    E +  +   + W +++++
Sbjct: 402 AGDLNRALRFIEEMPIEPTAAIWKALLNA 430



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 190/376 (50%), Gaps = 3/376 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A ++FDK+ +R   TW  ++  Y  +  P   L  +++M   G S + FT
Sbjct: 95  MYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFT 154

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VIKA A  +   CG ++HG  +KCG+DS   + ++L+ +Y +      A+ +FD + 
Sbjct: 155 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 214

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DV  WN++I+ ++      +AL LF+ M R G   + +++ +   AC  + F   G 
Sbjct: 215 SRNDVS-WNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGK 273

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KSG+ L  +  N L+ MYA+ G + +A  +  +L  +D VSWNS+LT + Q+ 
Sbjct: 274 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 333

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+ +F E++  G +P+++  ++ ++A    G L  G   +    K G V +     
Sbjct: 334 FGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYV 393

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTII-AGYAQNNCHLKALELFRTVQLEGL 358
           T++D+  +   +N   R   +M  +   + W  ++ A     N  L A       +L+  
Sbjct: 394 TIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPD 453

Query: 359 DADVMIIGSVLMACSG 374
           D    +I   + A  G
Sbjct: 454 DPGPHVILYNIYASGG 469



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 63/106 (59%)

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           L   +   +L +G+ ++G +I+  F  +  + ++L++MYA+CG+L+ A KVF+ +  +D 
Sbjct: 58  LKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDF 117

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           + WT++I+    H R   A+ LF +M    F+P+  T  +++ A +
Sbjct: 118 VTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAA 163


>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/627 (37%), Positives = 391/627 (62%), Gaps = 26/627 (4%)

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA--VSASGRLGNLLNG 280
           N DS + N ++         CK     + LQ   Q+P+         + +  R  +L  G
Sbjct: 44  NGDSNNNNPLIQSL------CKQGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQG 97

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI-----IA 335
            +LH + I  G   D  +   L++MY++   ++   +VF +   +    W  +     +A
Sbjct: 98  IDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLA 157

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG----LKCMSQTKEIHGYIIRK 391
           GY +     + L+L+R +   G+ +D      VL AC      +  +   +EIHG+I+R 
Sbjct: 158 GYGR-----EVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRH 212

Query: 392 GLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           G    V I+  ++D+Y + G +  +  VF+ +  K+VVSW++MI+ Y  NG   EALELF
Sbjct: 213 GFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELF 272

Query: 451 --YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
              ++   ++  +S+T+VS L A ++L+ L++GK ++G+I+R+G +    V S+LV +YA
Sbjct: 273 RKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYA 332

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           RCG L++ ++VF  ++ +D++ W S+I++ G+HG G+ AI +F +M  +  +P  I+F++
Sbjct: 333 RCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVS 392

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L ACSH+GL+ EGK   E M   +++ P  EHYAC+VDLLGRAN L+EA + +  M+IE
Sbjct: 393 VLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIE 452

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
           P  +VW +LLG+CR+H N EL E    +L EL+P N GNYVL+++++A ++ W +V++V+
Sbjct: 453 PGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVK 512

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
           M +   GL+K PG S IEI  KI+SF++ D+ + + ++++  L +++ ++ +E GYV  T
Sbjct: 513 MLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEM-KEKGYVPDT 571

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
           + VL++++ EEK +++ GHSE+LA+A+G++ S +G  IRITKNLR+C DCHS  K +S+ 
Sbjct: 572 KVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKF 631

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
             RE++VRD NRFH F+ GVCSCGDYW
Sbjct: 632 ANREILVRDVNRFHLFQDGVCSCGDYW 658



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 269/557 (48%), Gaps = 34/557 (6%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           N +I +    G   +AL +  +          +T+   + +C   +    G+++H   + 
Sbjct: 51  NPLIQSLCKQGNLNQALQVLSQEPN----PTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            G +   ++A  LI MY+    +  A  V  +   +    WN++           + +  
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166

Query: 249 FRELQGAGQKPDQVCTVNA----VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           +R +   G   D+          V++   +  LLNG+E+H + ++ GF   + I  TL+D
Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLD 226

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD--ADV 362
           MYA+  CV    RVF QM  ++ +SW+ +IA Y++N   L+ALELFR + LE  D   + 
Sbjct: 227 MYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFES 421
           + + SVL AC+ L  + Q K +HGYI+R+GL S L +++A+V VY +CGN++    VFE 
Sbjct: 287 VTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFER 346

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +E +DVVSW S+ISSY  +G   +A+++F  M +  +    I+ VS L A S   ++++G
Sbjct: 347 MEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEG 406

Query: 482 KELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMINAN 538
           K L   ++R G  +  SV   + +VD+  R   LD A K+ + ++ +    +W S++ + 
Sbjct: 407 KVLFESMVR-GHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSC 465

Query: 539 GLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            +H   ++A     ++ E E     +   LA +YA        E K + E+ R    L+ 
Sbjct: 466 RIHCNVELAERATSRLFELEPTNAGNYVLLADIYA--------EAKMWNEVKRVKMLLE- 516

Query: 598 WPEHYACLVDLLGRA--NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
                  L  + GR+      + Y F+   +  P  E   ALL    +   KE G +   
Sbjct: 517 ----ARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEM-KEKGYVPDT 571

Query: 656 K--LLELDPGNPGNYVL 670
           K  L +LDP      VL
Sbjct: 572 KVVLYDLDPEEKERIVL 588



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 200/387 (51%), Gaps = 12/387 (3%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+  +I +C     L  G  +H  ++  G D   F+   L+ MY++      AR++FD+ 
Sbjct: 80  TYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKT 139

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS-SFETL 178
             K  + +WN++  A + +G   E L L+R M R+G+ ++ +T+   L+AC  S +F +L
Sbjct: 140 -RKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSL 198

Query: 179 ---GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G EIH   ++ G    V++   L+ MYAR G +  A+ V  Q+  K+ VSW++M+  
Sbjct: 199 LLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIAC 258

Query: 236 FVQNDLYCKAMQFFRELQGAGQK--PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           + +N    +A++ FR++    Q   P+ V  V+ + A   L  L  GK +H Y +++G  
Sbjct: 259 YSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLD 318

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S L + + L+ +YA+C  +    RVF +M  +D +SW ++I+ Y  +    KA+++F+ +
Sbjct: 319 SILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEM 378

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGN 411
             +GL    +   SVL ACS    + + K +   ++R  K    +     +VD+ G+   
Sbjct: 379 IDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANR 438

Query: 412 IDYSRNVFES--IESKDVVSWTSMISS 436
           +D +  + +   IE    V W S++ S
Sbjct: 439 LDEAAKIIDDMRIEPGPKV-WGSLLGS 464



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 175/323 (54%), Gaps = 15/323 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +  S+ +A ++FDK  +RT++ WNA+  A    G    VL+ Y RM  +G+  D FT
Sbjct: 122 MYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFT 181

Query: 61  FPCVIKAC----AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           +  V+KAC    A +  L  G +IHG +L+ G++    I+ +L+ MYA+      A ++F
Sbjct: 182 YTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVF 241

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACEDSS 174
           D+M  K +VV W+++I+ YS +G+ LEAL LFR+M  +   L+ N+ T V+ LQAC   +
Sbjct: 242 DQMPVK-NVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALA 300

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  +H   ++ G +  + V +AL+ +YARCG +     V  ++E +D VSWNS+++
Sbjct: 301 ALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLIS 360

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            +  +    KA+Q F+E+   G  P  +  V+ + A    G +  GK L        F S
Sbjct: 361 SYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVL--------FES 412

Query: 295 DLQIGNTLMDMYAKCCCVNYMGR 317
            ++       +    C V+ +GR
Sbjct: 413 MVRGHKIFPSVEHYACMVDLLGR 435



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 136/239 (56%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV--LGISVDA 58
           MY + G VL+A ++FD++  + V +W+AM+  Y  NG+PL  LE + +M +    +  ++
Sbjct: 227 MYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            T   V++ACA L  L+ G  +HG +L+ G DS   +V++LV +YA+C +     ++F+R
Sbjct: 287 VTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFER 346

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M EK DVV WNS+IS+Y   G   +A+ +F+EM   GL  +  +FV+ L AC  +     
Sbjct: 347 M-EKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEE 405

Query: 179 GMEIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSML 233
           G  +  + V+ G  +   V +   ++ +  R  ++ EAA ++   ++E    V W S+L
Sbjct: 406 GKVLFESMVR-GHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKV-WGSLL 462


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/751 (33%), Positives = 422/751 (56%), Gaps = 18/751 (2%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F+ N+L+A Y +      AR+L D M  + + V +N +I AYS  G    +L      +R
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEM-PRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G+  + +++ AAL AC  +     G  +HA  +  G +  V+V+N+L++MY++CG+M E
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA-SG 272
           A  V    E +D VSWNS+++G+V+     + ++ F  ++  G   +     + +   SG
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 273 RLGNLLNGKE-LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
           R    ++  E +H   IK G  SD+ + + ++DMYAK   +     +F  +   + + + 
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 332 TIIAGYAQNNCHL------KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           T+IAG+ +    +      +AL L+  VQ  G+        SVL AC+    +   K+IH
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 386 GYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           G +I+     D  I +A++D+Y   G ++     F S    D+V+WT+M+S  V N L  
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           +AL LF+    A ++ D  T+ S ++A +SL++ + G+++  F  + GF+    + +S V
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
            MYAR G +D A + F  +++ D++ W+++I+ +  HG  + A+  F +M      P+ I
Sbjct: 463 HMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TFL +L ACSH GL++EG ++ E M  DY L P  +H  C+VDLLGRA  L +A  F+ +
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISN 582

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
                   +W +LL +CR+H + E G++VA +++EL+P +  +YV++ N++  + +    
Sbjct: 583 GIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLA 642

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            + R  M+  G+KK PG SWIE+   +HSF+A DKSH ES  IY KL E+  ++E+    
Sbjct: 643 SKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEK---- 698

Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
           +A T   +   E+     ++  HSE+LA+A G++   + + IR+ KNLRVC DCHS  KL
Sbjct: 699 LATTDTEISKREQ----NLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKL 754

Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +S+   RE+++RD  RFHHF  G CSC DYW
Sbjct: 755 ISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 169/574 (29%), Positives = 298/574 (51%), Gaps = 17/574 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G  L A +L D++ +R   ++N ++ AY   G     LET +R R  G+ VD F++
Sbjct: 53  YCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSY 112

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              + AC+    L  G  +H L +  G  S  F+ NSLV+MY+KC +  +AR++FD   E
Sbjct: 113 AAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEE 172

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM- 180
           ++DV  WNS++S Y  +G   E + +F  M+R G+  N++   + ++ C      T+ + 
Sbjct: 173 RDDVS-WNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIA 231

Query: 181 -EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF--- 236
             +H   +K+G +  V++ +A+I MYA+ G + EAA +   ++  + V +N+M+ GF   
Sbjct: 232 EAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRT 291

Query: 237 ---VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
              +  ++  +A+  + E+Q  G +P +    + + A    G L  GK++H   IK  F 
Sbjct: 292 ETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQ 351

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            D  IG+ L+D+Y    C+    R F      D ++WT +++G  QN  H KAL LF   
Sbjct: 352 EDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHES 411

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNI 412
              GL  D+  I SV+ AC+ L      ++I  +  + G     ++ N+ V +Y + G++
Sbjct: 412 LGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDV 471

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D +   F+ +ES DVVSW+++IS +  +G A +AL  F  M +A V  + IT +  L+A 
Sbjct: 472 DAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTAC 531

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGAL-DIANKVFNCVQTKDLI 529
           S   ++ +G       + K + L  ++   + +VD+  R G L D    + N +   D +
Sbjct: 532 SHGGLVDEGLRYYE-TMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPV 590

Query: 530 LWTSMINANGLHG---RGKVAIDLFYKMEAESFA 560
           +W S++ +  +H    RG++  +   ++E  S A
Sbjct: 591 IWRSLLASCRIHRDLERGQLVANRIMELEPTSSA 624



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 253/514 (49%), Gaps = 48/514 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A ++FD   +R   +WN+++  YV  G    ++  ++ MR  G+ +++F 
Sbjct: 153 MYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFA 212

Query: 61  FPCVIKACAMLKD--LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              VIK C+   D  +D    +HG V+K G DS  F+V++++ MYAK     +A  LF R
Sbjct: 213 LGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALF-R 271

Query: 119 MGEKEDVVLWNSIISAYSASGQCL------EALGLFREMQRVGLVTNAYTFVAALQACED 172
             ++ +VV++N++I+ +  +   +      EAL L+ E+Q  G+    +TF + L+AC  
Sbjct: 272 SVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNL 331

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
           + +   G +IH   +K       ++ +ALI +Y   G M +           D V+W +M
Sbjct: 332 AGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAM 391

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           ++G VQN+L+ KA+  F E  GAG KPD     + ++A   L     G+++  +A K GF
Sbjct: 392 VSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGF 451

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-R 351
                +GN+ + MYA+   V+   R F +M + D +SW+ +I+ +AQ+ C   AL  F  
Sbjct: 452 DRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDE 511

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA---------- 401
            V  + +  ++  +G VL ACS           HG ++ +GL     +N           
Sbjct: 512 MVDAKVVPNEITFLG-VLTACS-----------HGGLVDEGLRYYETMNKDYGLSPTIKH 559

Query: 402 ---IVDVYGKCGNI-DYSRNVFESIESKDVVSWTSMISS-YVHNGL------ANEALELF 450
              +VD+ G+ G + D    +   I   D V W S+++S  +H  L      AN  +EL 
Sbjct: 560 CTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMEL- 618

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
               E    +  + L +    A  LS+  K ++L
Sbjct: 619 ----EPTSSASYVILYNMYLDAGELSLASKTRDL 648


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/751 (33%), Positives = 422/751 (56%), Gaps = 18/751 (2%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F+ N+L+A Y +      AR+L D M  + + V +N +I AYS  G    +L      +R
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEM-PRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G+  + +++ AAL AC  +     G  +HA  +  G +  V+V+N+L++MY++CG+M E
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA-SG 272
           A  V    E +D VSWNS+++G+V+     + ++ F  ++  G   +     + +   SG
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 273 RLGNLLNGKE-LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
           R    ++  E +H   IK G  SD+ + + ++DMYAK   +     +F  +   + + + 
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 332 TIIAGYAQNNCHL------KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           T+IAG+ +    +      +AL L+  VQ  G+        SVL AC+    +   K+IH
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 386 GYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
           G +I+     D  I +A++D+Y   G ++     F S    D+V+WT+M+S  V N L  
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           +AL LF+    A ++ D  T+ S ++A +SL++ + G+++  F  + GF+    + +S V
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
            MYAR G +D A + F  +++ D++ W+++I+ +  HG  + A+  F +M      P+ I
Sbjct: 463 HMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TFL +L ACSH GL++EG ++ E M  DY L P  +H  C+VDLLGRA  L +A  F+ +
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISN 582

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
                   +W +LL +CR+H + E G++VA +++EL+P +  +YV++ N++  + +    
Sbjct: 583 SIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLA 642

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            + R  M+  G+KK PG SWIE+   +HSF+A DKSH ES  IY KL E+  ++E+    
Sbjct: 643 SKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEK---- 698

Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
           +A T   +   E+     ++  HSE+LA+A G++   + + IR+ KNLRVC DCHS  KL
Sbjct: 699 LATTDTEISKREQ----NLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKL 754

Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +S+   RE+++RD  RFHHF  G CSC DYW
Sbjct: 755 ISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 169/574 (29%), Positives = 298/574 (51%), Gaps = 17/574 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G  L A +L D++ +R   ++N ++ AY   G     LET +R R  G+ VD F++
Sbjct: 53  YCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSY 112

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              + AC+    L  G  +H L +  G  S  F+ NSLV+MY+KC +  +AR++FD   E
Sbjct: 113 AAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEE 172

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM- 180
           ++DV  WNS++S Y  +G   E + +F  M+R G+  N++   + ++ C      T+ + 
Sbjct: 173 RDDVS-WNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIA 231

Query: 181 -EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF--- 236
             +H   +K+G +  V++ +A+I MYA+ G + EAA +   ++  + V +N+M+ GF   
Sbjct: 232 EAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRT 291

Query: 237 ---VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
              +  ++  +A+  + E+Q  G +P +    + + A    G L  GK++H   IK  F 
Sbjct: 292 ETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQ 351

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            D  IG+ L+D+Y    C+    R F      D ++WT +++G  QN  H KAL LF   
Sbjct: 352 EDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHES 411

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNI 412
              GL  D+  I SV+ AC+ L      ++I  +  + G     ++ N+ V +Y + G++
Sbjct: 412 LGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDV 471

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D +   F+ +ES DVVSW+++IS +  +G A +AL  F  M +A V  + IT +  L+A 
Sbjct: 472 DAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTAC 531

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGAL-DIANKVFNCVQTKDLI 529
           S   ++ +G       + K + L  ++   + +VD+  R G L D    + N +   D +
Sbjct: 532 SHGGLVDEGLRYYE-TMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPV 590

Query: 530 LWTSMINANGLHG---RGKVAIDLFYKMEAESFA 560
           +W S++ +  +H    RG++  +   ++E  S A
Sbjct: 591 IWRSLLASCRIHRDLERGQLVANRIMELEPTSSA 624



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 254/503 (50%), Gaps = 26/503 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A ++FD   +R   +WN+++  YV  G    ++  ++ MR  G+ +++F 
Sbjct: 153 MYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFA 212

Query: 61  FPCVIKACAMLKD--LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              VIK C+   D  +D    +HG V+K G DS  F+V++++ MYAK     +A  LF R
Sbjct: 213 LGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALF-R 271

Query: 119 MGEKEDVVLWNSIISAYSASGQCL------EALGLFREMQRVGLVTNAYTFVAALQACED 172
             ++ +VV++N++I+ +  +   +      EAL L+ E+Q  G+    +TF + L+AC  
Sbjct: 272 SVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNL 331

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
           + +   G +IH   +K       ++ +ALI +Y   G M +           D V+W +M
Sbjct: 332 AGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAM 391

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           ++G VQN+L+ KA+  F E  GAG KPD     + ++A   L     G+++  +A K GF
Sbjct: 392 VSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGF 451

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-R 351
                +GN+ + MYA+   V+   R F +M + D +SW+ +I+ +AQ+ C   AL  F  
Sbjct: 452 DRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDE 511

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVI-LNAIVDVYGKC 409
            V  + +  ++  +G VL ACS    + +    +  + +  GLS  +     +VD+ G+ 
Sbjct: 512 MVDAKVVPNEITFLG-VLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRA 570

Query: 410 GNI-DYSRNVFESIESKDVVSWTSMISS-YVHNGL------ANEALELFYLMNEANVESD 461
           G + D    +  SI   D V W S+++S  +H  L      AN  +EL     E    + 
Sbjct: 571 GRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMEL-----EPTSSAS 625

Query: 462 SITLVSALSAASSLSILKKGKEL 484
            + L +    A  LS+  K ++L
Sbjct: 626 YVILYNMYLDAGELSLASKTRDL 648


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/613 (37%), Positives = 361/613 (58%), Gaps = 7/613 (1%)

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           + SWN+ L    +   + +A+  + ++  +G  P+      A  +   L   L G +LH 
Sbjct: 21  TASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHG 80

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ--MTAQDFISWTTIIAGYAQNNCH 343
           + IK G   +  +  +L+ MY KC  +    +VF +   +    + +  +IAGY+ N+  
Sbjct: 81  HVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRF 140

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAI 402
             A+ LFR ++ EG+  + + +  ++  C+G   +     +H   +R GL  DL + N +
Sbjct: 141 SDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCL 200

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           + +Y +CG++D++R +F+ +  K +++W +MIS Y  NGLA   L+L+  M    +  D 
Sbjct: 201 LTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDP 260

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
           +TLV  LS+ + L     G+E+   I   GF     + ++L++MYARCG L  A  +F+ 
Sbjct: 261 VTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDG 320

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +  K++I WT++I   G+HG+G++A+ LF +M +    PD   F+++L ACSH+GL  +G
Sbjct: 321 MTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKG 380

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
             +   M  DY L P PEHY+C+VDLLGRA  LEEA + + SM +EP   VW ALLGAC+
Sbjct: 381 LYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACK 440

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
           +H N EL E+  +K++E +P N G YVL+SN+F+ +   + + +VR+ MR   LKK PG 
Sbjct: 441 IHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGC 500

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQ 762
           S++E   +IH F+A D++H ++ EIY  L  + + ++R GG     Q        EE + 
Sbjct: 501 SYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDNDQ----ESRNEELIT 556

Query: 763 MLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFH 822
            +  HSE+LAIA+G++ +  G+ I + KNLRVC DCH F KLVS +  R+LVVRDA RFH
Sbjct: 557 GMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFH 616

Query: 823 HFEAGVCSCGDYW 835
           HF+ GVCSC DYW
Sbjct: 617 HFKNGVCSCKDYW 629



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 209/432 (48%), Gaps = 26/432 (6%)

Query: 20  QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAK 79
           Q T  +WNA L            L  Y +M   G S +AFTFP   K+CA L     G++
Sbjct: 18  QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV-VLWNSIISAYSAS 138
           +HG V+K G +   F+  SL++MY KC     AR++FD      ++ V +N++I+ YS +
Sbjct: 78  LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
            +  +A+ LFR+M++ G+  NA T +  +  C        G  +HA +V+ G +  + V 
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N L+ MY RCG +  A  +   +  K  ++WN+M++G+ QN L    +  +R+++  G  
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           PD V  V  +S+   LG    G+E+       GF  +  + N L++MYA+C  +     +
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAI 317

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F  MT ++ ISWT IIAGY  +     A++LF  +       D     SVL ACS     
Sbjct: 318 FDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACS----- 372

Query: 379 SQTKEIHGYIIRKGLSDLVIL-------------NAIVDVYGKCGNIDYSRNVFESIE-S 424
                 H  +  KGL     +             + +VD+ G+ G ++ +R +  S+   
Sbjct: 373 ------HAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVE 426

Query: 425 KDVVSWTSMISS 436
            D   W +++ +
Sbjct: 427 PDGAVWGALLGA 438



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 179/367 (48%), Gaps = 13/367 (3%)

Query: 1   MYGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY KC ++  A ++FD+   S+     +NA++  Y  N      +  + +MR  G+SV+A
Sbjct: 100 MYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNA 159

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            T   +I  CA    L  G  +H   ++ G D    + N L+ MY +C     AR+LFD 
Sbjct: 160 VTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDG 219

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M EK  ++ WN++IS Y+ +G     L L+R+M+  G+V +  T V  L +C        
Sbjct: 220 MPEK-GLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAA 278

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G E+      SG     ++ NALI MYARCG + +A  +   +  K+ +SW +++ G+  
Sbjct: 279 GREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGM 338

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY-AIKQGFVSDLQ 297
           +     A+Q F E+  + + PD    V+ +SA    G  L  K L+ + A+++ +   LQ
Sbjct: 339 HGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAG--LTEKGLYYFTAMERDY--GLQ 394

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
            G    + Y+  C V+ +GR      A+  I   ++    A     L A ++ R V+L  
Sbjct: 395 PGP---EHYS--CVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAE 449

Query: 358 LDADVMI 364
           L  + +I
Sbjct: 450 LAFEKVI 456


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/704 (35%), Positives = 389/704 (55%), Gaps = 8/704 (1%)

Query: 21  RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDC---G 77
           R+ F WN++  A  S   P   L  Y+RM   G+  D  TFP  + A A +   +    G
Sbjct: 78  RSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKG 137

Query: 78  AKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           A++H   L+ G    D F  N+LV  YA C     AR++FD M  + DVV WNS++SA  
Sbjct: 138 AELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPAR-DVVSWNSLVSALL 196

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +G   +A      M R G+  N  + V+ L AC     E  G+ +H   +K G N  V 
Sbjct: 197 TNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVN 256

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           + NAL+ MY + G +  +  V   ++ K+ VSWNS +  F     +   ++ FR +    
Sbjct: 257 LGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHD 316

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             P  V   + + A   LG    GKELH Y+I++   SD+ I NTLMDMYAK  C     
Sbjct: 317 VTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKAS 376

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            +F  +  ++ +SW  +IA   QN    +A  L   +Q  G   +   + ++L ACS + 
Sbjct: 377 AIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVA 436

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +   K+IH + IR+ L SDL + NA++DVY KCG ++ +R +F+  E KD VS+ ++I 
Sbjct: 437 SVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSE-KDGVSYNTLIV 495

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  +    E+L LF  M  A +E D+++ +  LSA S+LS  K+GKE++G ++++  + 
Sbjct: 496 GYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDS 555

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
              +A+SL+D+Y + G LD A+K+FN +  KD+  W +MI   G+HG+  VA +LF  M+
Sbjct: 556 HPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMK 615

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
            +    DH++++A+L  CSH GL++ GKK+   M     + P   HYAC+VDLLGRA  L
Sbjct: 616 DDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQL 674

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
            E+ + +R+M     ++VW ALLG+CR+H + EL  + A+ L EL P N G Y L+ N++
Sbjct: 675 SESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMY 734

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           + S  W +   V+  M+   ++K P  SW++ GNK+ +F+  D+
Sbjct: 735 SESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFLVGDE 778



 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 183/598 (30%), Positives = 324/598 (54%), Gaps = 19/598 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR----MRVLGISVD 57
           Y  CG   DA ++FD++  R V +WN+++ A ++NG    +LE   R    M   G+ V+
Sbjct: 164 YAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNG----MLEDAKRAVVGMMRSGVPVN 219

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             +   ++ AC   +D   G  +HGLVLK G +S   + N+LV MY K  D   +  +F+
Sbjct: 220 VASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFN 279

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            M EK +V  WNS I  ++ +G   + L +FR M    +   + T  + L A  D  +  
Sbjct: 280 GMQEKNEVS-WNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFH 338

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LG E+H  +++      +++AN L+ MYA+ G   +A+ +   +E ++ VSWN+M+    
Sbjct: 339 LGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLT 398

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN    +A +   E+Q  G+ P+    VN + A  R+ ++  GK++HA++I++  +SDL 
Sbjct: 399 QNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLF 458

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N L+D+YAKC  +N + R  +  + +D +S+ T+I GY+Q+ C  ++L LF+ ++L G
Sbjct: 459 VSNALIDVYAKCGQLN-LARYIFDRSEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAG 517

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           ++ D +     L ACS L    Q KEIHG ++++ L S   + N+++DVY K G +D + 
Sbjct: 518 IEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTAS 577

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F  I  KDV SW +MI  Y  +G  + A ELF LM +  +E D ++ ++ LS  S   
Sbjct: 578 KIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGG 637

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDLILWTSMI 535
           ++ +GK+    +I +    +    + +VD+  R G L + A  + N     +  +W +++
Sbjct: 638 LVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGALL 697

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
            +  +HG     ++A +  ++++ E+    + T L  +Y  S SG+ NE     ++M+
Sbjct: 698 GSCRIHGDIELARLAAEHLFELKPEN--SGYYTLLRNMY--SESGMWNEANGVKKLMK 751



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 231/440 (52%), Gaps = 8/440 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGK G +  +  +F+ + ++   +WN+ +G +   G    VLE +  M    ++  + T
Sbjct: 264 MYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVT 323

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A   L     G ++HG  ++   +S  FI N+L+ MYAK     KA  +F+ + 
Sbjct: 324 LSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENI- 382

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  +VV WN++I+  + +G   EA  L  EMQ+ G   N++T V  L AC   +   +G 
Sbjct: 383 EVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGK 442

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA +++      ++V+NALI +YA+CG++   A  ++    KD VS+N+++ G+ Q+ 
Sbjct: 443 QIHAWSIRRSLMSDLFVSNALIDVYAKCGQLN-LARYIFDRSEKDGVSYNTLIVGYSQSQ 501

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +++  F++++ AG + D V  +  +SA   L     GKE+H   +K+   S   + N
Sbjct: 502 CCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLAN 561

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+D+Y K   ++   ++F ++T +D  SW T+I GY  +     A ELF  ++ +G++ 
Sbjct: 562 SLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEY 621

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVF 419
           D +   +VL  CS    + + K+    +I + +    +  A +VD+ G+ G +  S  + 
Sbjct: 622 DHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEII 681

Query: 420 ESIE---SKDVVSWTSMISS 436
            ++    + DV  W +++ S
Sbjct: 682 RNMPFRANSDV--WGALLGS 699


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/614 (36%), Positives = 364/614 (59%), Gaps = 2/614 (0%)

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           N ++  +N+M+ G V  D +  A+  +  +  A   PD       + A  RL     G  
Sbjct: 66  NSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVM 125

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           +H+   K GF  D+ +   ++  Y+KC  +    +VF  M  ++ +SWT +I G  +   
Sbjct: 126 IHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGK 185

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNA 401
             +A++LFR +   GL  D  +I  VL AC+ L  +   + I   +   GLS ++ +  +
Sbjct: 186 FREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATS 245

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           +VD+Y KCG+++ +R VF+ +  KD+V W++MI  Y  NGL  EA+ELF+ M + NV  D
Sbjct: 246 LVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPD 305

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
              +V ALS+ +SL  L+ G    G +  + F     + +SL+D YA+CG+++ A  V+ 
Sbjct: 306 CYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYK 365

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            ++ KD +++ ++I+   ++G+   A  +F +M      P+  TF+ LL  C+H+GL+++
Sbjct: 366 MMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDD 425

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G+ +   M  D+ + P  EHY C+VDLL RA  L+EA+  ++ M ++    VW +LLG C
Sbjct: 426 GRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGC 485

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           R+H   +L E V K+L+EL+P N G+YVL+SN+++ASR+W + E++R  +   G++K PG
Sbjct: 486 RLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPG 545

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            SW+E+   +H F+  D SH  S +IY+KL  + + L +E GY   T+FVL +VEEEEK 
Sbjct: 546 YSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDL-KEAGYNPTTEFVLFDVEEEEKE 604

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             L  HSE+LA+A+ ++ +    +IR+ KNLRVC DCH   K +S++ GRE+V+RD NRF
Sbjct: 605 HFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRF 664

Query: 822 HHFEAGVCSCGDYW 835
           H F  G CSC DYW
Sbjct: 665 HCFSDGACSCRDYW 678



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 230/466 (49%), Gaps = 8/466 (1%)

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           +F +     +  L+N++I    +  +   A+ L+  M +  +V +++TF   L+AC   +
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
              LG+ IH+   K+G +  V+V   ++  Y++CG + +A  V   +  K+ VSW  M+ 
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
           G ++   + +A+  FR L  +G +PD    V  + A  RLG+L +G+ +     + G   
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSR 238

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           ++ +  +L+DMY KC  +     VF  M  +D + W+ +I GYA N    +A+ELF  ++
Sbjct: 239 NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMR 298

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI-IRKGLSDLVILNAIVDVYGKCGNID 413
              +  D   +   L +C+ L  +       G +   + LS+ V+  +++D Y KCG+++
Sbjct: 299 KVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSME 358

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  V++ ++ KD V + ++IS     G    A  +F  M +  +  +  T V  L   +
Sbjct: 359 EALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCT 418

Query: 474 SLSILKKGKE-LNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLI 529
              ++  G+   N   +   F++  ++     +VD+ AR G LD A+ +   +  K ++I
Sbjct: 419 HAGLVDDGRHYFNS--MSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVI 476

Query: 530 LWTSMINANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYACS 574
           +W S++    LH   ++A  +  ++ E E +   H   L+ +Y+ S
Sbjct: 477 VWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSAS 522



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 195/422 (46%), Gaps = 10/422 (2%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
           +    F +N M+   VS       +  Y+ M    I  D+FTF  V+KACA L     G 
Sbjct: 65  TNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGV 124

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
            IH LV K G+D   F+  ++V  Y+KC   R A ++FD M  K +VV W  +I      
Sbjct: 125 MIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVK-NVVSWTGMICGCIEF 183

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G+  EA+ LFR +   GL  + +  V  L+AC        G  I     + G +  V+VA
Sbjct: 184 GKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVA 243

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
            +L+ MY +CG M EA  V   +  KD V W++M+ G+  N L  +A++ F E++    +
Sbjct: 244 TSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVR 303

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           PD    V A+S+   LG L  G         + F+S+  +G +L+D YAKC  +     V
Sbjct: 304 PDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGV 363

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           +  M  +D + +  +I+G A       A  +F  +   G+  +      +L  C+    +
Sbjct: 364 YKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLV 423

Query: 379 SQTKEI-----HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTS 432
              +       H + +   +        +VD+  + G +D + N+ + +  K +V+ W S
Sbjct: 424 DDGRHYFNSMSHDFSVTPTIEH---YGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGS 480

Query: 433 MI 434
           ++
Sbjct: 481 LL 482



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 168/360 (46%), Gaps = 19/360 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            Y KCG + DA ++FD +  + V +W  M+   +  G+    ++ +  +   G+  D F 
Sbjct: 148 FYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFV 207

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++ACA L DL+ G  I   + +CG     F+  SLV MY KC    +AR +FD M 
Sbjct: 208 IVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMV 267

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK D+V W+++I  Y+++G   EA+ LF EM++V +  + Y  V AL +C      +LG 
Sbjct: 268 EK-DIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSC-----ASLGA 321

Query: 181 EIHAATVKSGQNLQVYVAN-----ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                  K   N + +++N     +LI  YA+CG M EA GV   ++ KD V +N++++G
Sbjct: 322 LELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISG 381

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
                    A   F ++   G  P++   V  +      G + +G+  H +        D
Sbjct: 382 LAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGR--HYF---NSMSHD 436

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             +  T+ + Y   C V+ + R  +   A + I    + A        L    L R  QL
Sbjct: 437 FSVTPTI-EHYG--CMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQL 493



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 13/273 (4%)

Query: 373 SGLKCMSQTKEIHGYIIRKGL---SDL--VILNAIVDVYGKCGNIDYSRNVFESIESK-D 426
           SGLKC+   K  H  ++R  L   +DL  +IL + ++      N  Y   VF    +  +
Sbjct: 12  SGLKCLKHAKLAHCRLLRLNLHHDNDLLSIILRSTINF---SNNAQYPILVFHKTPTNSN 68

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
              + +MI   V     N A+ L+  M++A +  DS T    L A + L++   G  ++ 
Sbjct: 69  TFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHS 128

Query: 487 FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
            + + GF+ +  V +++V  Y++CG L  A KVF+ +  K+++ WT MI      G+ + 
Sbjct: 129 LVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFRE 188

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR-CDYQLDPWPEHYACL 605
           A+DLF  +      PD    + +L AC+  G +  G+     MR C    + +      L
Sbjct: 189 AVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVA--TSL 246

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           VD+  +   +EEA +FV    +E     W A++
Sbjct: 247 VDMYTKCGSMEEA-RFVFDGMVEKDIVCWSAMI 278


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/769 (33%), Positives = 434/769 (56%), Gaps = 15/769 (1%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
            A +H  +++     + F+ N+L+A Y  C     AR+L D M  + + V +N +I AYS
Sbjct: 33  AAAVHAHIVRAHPSPSLFLRNTLLAAY--CRLGGHARRLLDEM-PRTNAVSFNLLIDAYS 89

Query: 137 ASGQCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
            +GQ   +L  F   +R  G+  + +T+ AAL AC  +     G  +HA +V  G    V
Sbjct: 90  RAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGV 149

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           +V+N+L++MYARCG M +A  V    + +D VSWN++++G+V+       ++ F  ++ +
Sbjct: 150 FVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRS 209

Query: 256 GQKPDQVCTVNAVSA-SGRLGNLLN-GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
           G   +     + +   +G    +++    +H   +K GF SD+ + + ++ MYAK   ++
Sbjct: 210 GIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALS 269

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHL------KALELFRTVQLEGLDADVMIIGS 367
               +F  +   + + +  +IAG  ++   +      +AL L+  VQ  G++       S
Sbjct: 270 EAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSS 329

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
           V+ AC+    +   K+IHG +++     D  I +A++D+Y   G ++     F S+  +D
Sbjct: 330 VIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQD 389

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
           VV+WT+MIS  V N L   AL LF+ +  A ++ D  T+ S ++A +SL++ + G+++  
Sbjct: 390 VVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQC 449

Query: 487 FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
           F  + GF    ++ +S + MYAR G +  A + F  +++ D++ W+++I+++  HG  + 
Sbjct: 450 FATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARD 509

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           A+  F +M      P+ ITFL +L ACSH GL++EG K+ E M+ +Y L P  +H  C+V
Sbjct: 510 ALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVV 569

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           DLLGRA  L +A  F+R         +W +LL +CR+H + E G++VA +++EL P +  
Sbjct: 570 DLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSA 629

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
           +YV + N++  + +     ++R  M+  G+KK PG SWIE+ + +HSF+A DKSH ES+ 
Sbjct: 630 SYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNA 689

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
           IY KLAE+  K+++     A +      +  E+    +  HSE+LA+A G++   + + I
Sbjct: 690 IYSKLAEMLSKIDKLTATDASSTKSDDTIRNEQ--SWMNWHSEKLAVALGLIHLPQSAPI 747

Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           R+ KNLRVC DCH   KL+S+   RE+V+RDA RFHHF  G CSC DYW
Sbjct: 748 RVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 160/566 (28%), Positives = 296/566 (52%), Gaps = 18/566 (3%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAFTFPCVIKACA 69
           A +L D++ +    ++N ++ AY   G+P   LET++R R   G+  D FT+   + AC+
Sbjct: 66  ARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACS 125

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
               L  G  +H L +  G     F+ NSLV+MYA+C D  +ARQ+FD   E++DV  WN
Sbjct: 126 RAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVS-WN 184

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC--EDSSFETLGMEIHAATV 187
           +++S Y  +G   + L +F  M+R G+  N++   + ++ C   D     +   +H   V
Sbjct: 185 ALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVV 244

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF------VQNDL 241
           K+G +  V++A+A++ MYA+ G ++EA  +   + + + V +N+M+ G       V  D+
Sbjct: 245 KAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDV 304

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  + E+Q  G +P +    + + A    G++  GK++H   +K  F  D  IG+ 
Sbjct: 305 LREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSA 364

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+D+Y    C+    R F  +  QD ++WT +I+G  QN    +AL LF  +   GL  D
Sbjct: 365 LIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPD 424

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFE 420
              I SV+ AC+ L      ++I  +  + G      + N+ + +Y + G++  +   F+
Sbjct: 425 PFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQ 484

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +ES D+VSW+++ISS+  +G A +AL  F  M +A V  + IT +  L+A S   ++ +
Sbjct: 485 EMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDE 544

Query: 481 GKELNGFIIRKGFNLEGSVA--SSLVDMYARCGAL-DIANKVFNCVQTKDLILWTSMINA 537
           G +     +++ + L  ++   + +VD+  R G L D    + + +   + ++W S++ +
Sbjct: 545 GLKYYE-TMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLAS 603

Query: 538 NGLHG---RGKVAIDLFYKMEAESFA 560
             +H    RG++  D   +++  S A
Sbjct: 604 CRIHRDMERGQLVADRIMELQPSSSA 629



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 233/453 (51%), Gaps = 24/453 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG +  A Q+FD   +R   +WNA++  YV  G    +L  ++ MR  GI +++F 
Sbjct: 158 MYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFA 217

Query: 61  FPCVIKACAMLKD--LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              VIK CA   D  +D  A +HG V+K G+DS  F+ +++V MYAK     +A  LF  
Sbjct: 218 LGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKS 277

Query: 119 MGEKEDVVLWNSIIS------AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           + +  +VV++N++I+      A   +    EAL L+ E+Q  G+    +TF + ++AC  
Sbjct: 278 VLDP-NVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNL 336

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
           +     G +IH   +K       ++ +ALI +Y   G M +       +  +D V+W +M
Sbjct: 337 AGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAM 396

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           ++G VQN+L+ +A+  F EL GAG KPD     + ++A   L     G+++  +A K GF
Sbjct: 397 ISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGF 456

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-R 351
                +GN+ + MYA+   V+   R F +M + D +SW+ +I+ +AQ+ C   AL  F  
Sbjct: 457 GRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNE 516

Query: 352 TVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVD 404
            V  + +  ++  +G VL ACS       GLK     KE   Y +   +        +VD
Sbjct: 517 MVDAKVVPNEITFLG-VLTACSHGGLVDEGLKYYETMKE--EYALSPTIKH---CTCVVD 570

Query: 405 VYGKCGNI-DYSRNVFESIESKDVVSWTSMISS 436
           + G+ G + D    + +SI   + V W S+++S
Sbjct: 571 LLGRAGRLADAEAFIRDSIFHDEPVIWRSLLAS 603


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/650 (35%), Positives = 374/650 (57%), Gaps = 35/650 (5%)

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V   ++  + +SWN+M+ G   +     A+  +  +   G  P+         +  +
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN-------------------- 313
                 GK++HA  +K G   DL +  +L+ MYA+   V                     
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 314 ---YMGR--------VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
              Y  R        +F ++  +D +SW  +I+GYA+   + +ALELF  +    +  D 
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFES 421
             + +VL  C+    +   ++IH +I   G  S+L ++NA++D+Y KCG ++ +  +FE 
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           ++ KDV+SW ++I  Y +     EAL +F  M +     + +T++S L A + L  +  G
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIG 330

Query: 482 KELNGFIIRK--GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           + ++ +I +K  G     S+ +SL+DMYA+CG ++ AN+VF+ +  K L    +MI    
Sbjct: 331 RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFA 390

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HGR   A DL  +M+ +   PD ITF+ LL ACSH+GL + G+K  + M  DY+++P  
Sbjct: 391 MHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKL 450

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C++DLLGR+   +EA + + SM +EP   +W +LL AC++H N ELGE++A+KL++
Sbjct: 451 EHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMK 510

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           ++P NPG+YVL+SN++A S +W DV +VR  +   GLKK PG S IEI + +H F+  DK
Sbjct: 511 IEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDK 570

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H ++ EIYK L EI + L  E G+V+ T  VL  +EEE K   L  HSE+LAIA+G++ 
Sbjct: 571 FHPQNKEIYKMLEEI-DSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLIS 629

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           +  G+ +RI KNLRVC +CH   KL+S+++ RE++ RD +RFHHF+ G+C
Sbjct: 630 TKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 263/537 (48%), Gaps = 55/537 (10%)

Query: 85  LKCGYDSTDFIVNSLV---AMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQC 141
           +K G  +T++ ++ L+    +    +    A  +F  + E   +  WN++I  ++ S   
Sbjct: 1   IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLS-WNTMIRGHALSSDP 59

Query: 142 LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANAL 201
           + AL L+  M  +GL  N+YTF    ++C  S     G +IHA  +K G  + ++V  +L
Sbjct: 60  ISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSL 119

Query: 202 IAMYARCG-------------------------------KMTEAAGVLYQLENKDSVSWN 230
           I+MYA+ G                                M +A  +  ++  KD VSWN
Sbjct: 120 ISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWN 179

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           +M++G+ +   Y +A++ F E+     KPD+      +S     GN+  G+++H++    
Sbjct: 180 AMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNH 239

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           GF S+L++ N L+D+Y+KC  +     +F  +  +D ISW T+I GYA  N H +AL +F
Sbjct: 240 GFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVF 299

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK---GLSDLVILNAIVDVYG 407
           + +   G   + + + S+L AC+ L  +   + IH YI +K    +++  +  +++D+Y 
Sbjct: 300 QEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYA 359

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KCGNI+ +  VF++I +K + S  +MI  +  +G A+ A +L   M +  +E D IT V 
Sbjct: 360 KCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVG 419

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL------VDMYARCGALDIANKVFN 521
            LSA S   +   G++     I K   L+  +   L      +D+  R G    A ++ N
Sbjct: 420 LLSACSHAGLSDLGRK-----IFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELIN 474

Query: 522 CVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            +  + D ++W S++ A  +H     G++      K+E ++  P     L+ +YA S
Sbjct: 475 SMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKN--PGSYVLLSNIYATS 529



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 153/560 (27%), Positives = 252/560 (45%), Gaps = 85/560 (15%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F  + +    +WN M+  +  + +P+  L  Y  M  LG+S +++TFP + K+CA 
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA---------KCYD------------- 108
            K    G +IH  +LK G      +  SL++MYA         K +D             
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 109 ---------FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN 159
                      KA+++FD +  K DVV WN++IS Y+  G+  EAL LF EM ++ +  +
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIK-DVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPD 209

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
             T    L  C  S    LG +IH+     G    + + NALI +Y++CG+M  A G+  
Sbjct: 210 ESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFE 269

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
            L+ KD +SWN+++ G+   + + +A+  F+E+   G+ P+ V  ++ + A   LG +  
Sbjct: 270 GLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDI 329

Query: 280 GKELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
           G+ +H Y  K  +G +++  +  +L+DMYAKC  +    +VF  +  +   S   +I G+
Sbjct: 330 GRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGF 389

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV 397
           A +     A +L   ++ +G++ D +    +L ACS                  GLSDL 
Sbjct: 390 AMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACS----------------HAGLSDL- 432

Query: 398 ILNAIVDVYGKCGNIDYSRNVFES------IESKDVVSWTSMISSYVHNGLANEALELFY 451
                             R +F+S      IE K +  +  MI     +GL  EA E   
Sbjct: 433 -----------------GRKIFKSMTLDYRIEPK-LEHYGCMIDLLGRSGLFKEAEE--- 471

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV---DMYA 508
           L+N   +E D +   S L A      + K  EL   I +K   +E     S V   ++YA
Sbjct: 472 LINSMTMEPDGVIWGSLLKACK----IHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYA 527

Query: 509 RCGALDIANKVFNCVQTKDL 528
                D   +V   +  K L
Sbjct: 528 TSARWDDVARVRTLLNDKGL 547



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 11/365 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G++  A+++FD++  + V +WNAM+  Y   G     LE ++ M  + +  D  T 
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+  C    +++ G +IH  +   G+ S   +VN+L+ +Y+KC +  +A  LF+ +  
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY 273

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN++I  Y+      EAL +F+EM ++G   N  T ++ L AC       +G  
Sbjct: 274 K-DVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRW 332

Query: 182 IHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           IH    K  + +     +  +LI MYA+CG +  A  V   + NK   S N+M+ GF  +
Sbjct: 333 IHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMH 392

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A      ++  G +PD +  V  +SA    G    G++     I +    D +I 
Sbjct: 393 GRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRK-----IFKSMTLDYRIE 447

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L + Y   C ++ +GR      A++ I+  T+          LKA ++ + ++L  L 
Sbjct: 448 PKL-EHYG--CMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELI 504

Query: 360 ADVMI 364
           A  ++
Sbjct: 505 AQKLM 509



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  A  LF+ +  + V +WN ++G Y         L  +  M  LG + +  T
Sbjct: 254 LYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVT 313

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++ ACA L  +D G  IH  + K   G  +   +  SL+ MYAKC +   A Q+FD 
Sbjct: 314 MLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDT 373

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           +  K  +   N++I  ++  G+   A  L   M++ G+  +  TFV  L AC  +    L
Sbjct: 374 ILNKS-LSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDL 432

Query: 179 GMEIHAATV---KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           G +I  +     +    L+ Y    +I +  R G   EA  ++  +    D V W S+L
Sbjct: 433 GRKIFKSMTLDYRIEPKLEHY--GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 134/306 (43%), Gaps = 53/306 (17%)

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           + Y+ +VF+SI+  + +SW +MI  +  +     AL L+  M    +  +S T      +
Sbjct: 28  LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC--------- 522
            +     ++GK+++  I++ G  ++  V +SL+ MYA+ G ++ A+KVF+          
Sbjct: 88  CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147

Query: 523 ----------------------VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
                                 +  KD++ W +MI+     GR K A++LF +M      
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA---------CLVDLLGR 611
           PD  T   +L  C+HSG +  G+          Q+  W +++           L+DL  +
Sbjct: 208 PDESTMATVLSTCTHSGNVELGR----------QIHSWIDNHGFGSNLKLVNALIDLYSK 257

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
              +E A+     +Q +     W  L+G     ++ +   +V +++L+L  G   N V +
Sbjct: 258 CGEMERAHGLFEGLQYKDVIS-WNTLIGGYAYINHHKEALLVFQEMLKL--GETPNDVTM 314

Query: 672 SNVFAA 677
            ++  A
Sbjct: 315 LSILPA 320



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A Q+FD +  +++ + NAM+  +  +G      +  SRM+  GI  D  T
Sbjct: 357 MYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDIT 416

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FRKAR 113
           F  ++ AC+     D G KI   +      + D+ +   +  Y    D       F++A 
Sbjct: 417 FVGLLSACSHAGLSDLGRKIFKSM------TLDYRIEPKLEHYGCMIDLLGRSGLFKEAE 470

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
           +L + M  + D V+W S++ A
Sbjct: 471 ELINSMTMEPDGVIWGSLLKA 491


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/685 (35%), Positives = 384/685 (56%), Gaps = 16/685 (2%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L+A   SS    G+++H A  K G      + N LI MY +CG++  A  V   + +++ 
Sbjct: 11  LRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNV 70

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK-PDQVCTVNAVSASGRLGNLLNGKELHA 285
           VSW +++ GF+++      ++   E++ A +  P++     ++ A   +G+   G  +H 
Sbjct: 71  VSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHG 130

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHL 344
             ++ G+     + ++L+ +Y+K   +    RVF          +W  +++GYA      
Sbjct: 131 LCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGR 190

Query: 345 KALELFRTVQL-EGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS---DLVIL 399
            AL +FR ++  EG    D     S+L ACSGL    +  ++H  +   G S   + ++ 
Sbjct: 191 DALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILA 250

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
            A+VD+Y KC  +  +  VFE +E K+V+ WT+++  +   G   EALELF     +   
Sbjct: 251 GALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGAR 310

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            DS  L S +   +  +++++G++++ + I+     + S  +S+VDMY +CG  D A ++
Sbjct: 311 PDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERM 370

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  ++  +++ WT+M+N  G HG G+ A+ LF +M A    PD +T+LALL ACSH+GL+
Sbjct: 371 FREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLV 430

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
           +E +++   +R D  + P  EHYAC+VDLLGRA  L EA   +R+M +EPT  VW  LL 
Sbjct: 431 DECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLS 490

Query: 640 ACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           ACRVH +  +G      LL +D  NP NYV +SNV A + +W++  +VR  MR  GLKK 
Sbjct: 491 ACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQ 550

Query: 700 PGSSWIEIGNKIHSFI---ARDKSHSESDEIYKKLAEITEKLEREGGYVA-QTQFVLHNV 755
            G SW+E+G ++H F      +++H ++ +I + L ++  ++  + GY A   +F LH+V
Sbjct: 551 GGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADDARFALHDV 610

Query: 756 EEEEKVQMLYGHSERLAIAY-----GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
           +EE + + L  HSERLA+       GV     G  IR+ KNLRVC DCH F K +S +  
Sbjct: 611 DEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFFKGLSAVVR 670

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           R LVVRDANRFH FE G CSC DYW
Sbjct: 671 RALVVRDANRFHRFEHGSCSCKDYW 695



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 255/513 (49%), Gaps = 23/513 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           MY KCG +  A ++F  +  R V +W A++  ++ +G+    L     MR     + + +
Sbjct: 48  MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 107

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T    +KAC ++ D   G  IHGL ++ GY   D + +SLV +Y+K      AR++FD  
Sbjct: 108 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 167

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQR--VGLVTNAYTFVAALQACEDSSFET 177
           G    +  WN+++S Y+ +G   +AL +FREM+R       + +TF + L+AC       
Sbjct: 168 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 227

Query: 178 LGMEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
            G ++HAA   SG +      +A AL+ MY +C ++  A  V  +LE K+ + W +++ G
Sbjct: 228 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 287

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
             Q     +A++ FR    +G +PD     + V        +  G+++H Y IK    +D
Sbjct: 288 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 347

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           +  GN+++DMY KC   +   R+F +M A + +SWTT++ G  ++    +A+ LF  ++ 
Sbjct: 348 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 407

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA------IVDVYGKC 409
            G++ D +   ++L ACS    + + +     I R    D  +         +VD+ G+ 
Sbjct: 408 GGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRR----DRTVRPKAEHYACMVDLLGRA 463

Query: 410 GNIDYSRNVFESIESKDVVS-WTSMISS-YVHNGLA--NEALELFYLMNEANVESDSITL 465
           G +  +R++  ++  +  V  W +++S+  VH  +A   EA ++   M+  N   + +TL
Sbjct: 464 GELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDN-PVNYVTL 522

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            + L+ A       K ++    + R+G   +G 
Sbjct: 523 SNVLAEAGEWRECHKVRDA---MRRRGLKKQGG 552



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/539 (27%), Positives = 266/539 (49%), Gaps = 17/539 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++A A    L  G ++HG + K G+ S   + N+L+ MY KC +   A ++F  M ++ 
Sbjct: 10  LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDR- 68

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLGMEI 182
           +VV W +++  +   G     L L  EM+       N YT  A+L+AC        G+ I
Sbjct: 69  NVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGI 128

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV-SWNSMLTGFVQNDL 241
           H   V++G      VA++L+ +Y++ G++ +A  V         + +WN+M++G+     
Sbjct: 129 HGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGH 188

Query: 242 YCKAMQFFREL-QGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--VSDLQ 297
              A+  FRE+ +  GQ +PD+    + + A   LG    G ++HA     GF   S+  
Sbjct: 189 GRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAI 248

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +   L+DMY KC  +    +VF ++  ++ I WT ++ G+AQ     +ALELFR     G
Sbjct: 249 LAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSG 308

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
              D  ++ SV+   +    + Q +++H Y I+    +D+   N+IVD+Y KCG  D + 
Sbjct: 309 ARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAE 368

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F  + + +VVSWT+M++    +GL  EA+ LF  M    VE D +T ++ LSA S   
Sbjct: 369 RMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAG 428

Query: 477 ILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSM 534
           ++ + +     I R +    +    + +VD+  R G L  A  +   +  +  + +W ++
Sbjct: 429 LVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTL 488

Query: 535 INANGLH---GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           ++A  +H     G+ A D+   M+ +    + + ++ L    + +G   E  K  + MR
Sbjct: 489 LSACRVHKDVAVGREAGDVLLAMDGD----NPVNYVTLSNVLAEAGEWRECHKVRDAMR 543


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/656 (35%), Positives = 373/656 (56%), Gaps = 35/656 (5%)

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V   ++  + + WN+ML G+  +     A++ +  +   G  P+       + +  +
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC----------------CVNYMG- 316
                 G+++H + +K G+  DL +  +L+ MYA+                   V+Y   
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 317 --------------RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
                          +F ++  +D +SW  +I+GYA+   + +ALELF+ +    +  D 
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFES 421
             + +VL AC+  + +   +++H +I   G  S+L I+NA++D+Y KCG ++ +  +FE 
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  KDVVSW ++I  Y H  L  EAL LF  M  +    + +T+VS L A + L  +  G
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 482 KELNGFIIRKGFNLEG--SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           + ++ +I +K  ++    S+ +SL+DMYA+CG ++ A++VFN +  K L  W +MI    
Sbjct: 319 RWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 378

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HGR     DLF +M      PD ITF+ LL ACSHSG ++ G+   + M  DY + P  
Sbjct: 379 MHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKL 438

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C++DLLG +   +EA + +++M +EP   +WC+LL ACR H N EL E  A+ L++
Sbjct: 439 EHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMK 498

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           ++P NPG+YVL+SN++A + +W +V +VR  + G G+KK PG S IEI +++H FI  DK
Sbjct: 499 VEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDK 558

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H  + EIY  L E+   LE   G+V  T  VL  +EEE K   L  HSE+LAIA+G++ 
Sbjct: 559 LHPRNREIYGMLEEMEALLEEA-GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 617

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +  G+ + I KNLRVC +CH   KLVS+++ RE++ RD  RFHHF  GVCSC D+W
Sbjct: 618 TKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 252/510 (49%), Gaps = 52/510 (10%)

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
           F  A  +F  + E   ++ WN+++  Y+ S   + AL L+  M  +GL+ N+YTF   L+
Sbjct: 16  FPYAISVFATIQEPNQLI-WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLK 74

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY--------- 219
           +C  S     G +IH   +K G    +YV  +LI+MYA+ G++ +A  V           
Sbjct: 75  SCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVS 134

Query: 220 ----------------------QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
                                 ++  KD VSWN+M++G+ +   Y +A++ F+E+     
Sbjct: 135 YTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNV 194

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +PD+   V  +SA  +  ++  G+++H++    GF S+L+I N L+D+Y+KC  V     
Sbjct: 195 RPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACG 254

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           +F  ++ +D +SW T+I GY   N + +AL LF+ +   G   + + I S+L AC+ L  
Sbjct: 255 LFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGA 314

Query: 378 MSQTKEIHGYIIRKGLSDLV----ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +   + IH YI +K L D+     +  +++D+Y KCG+I+ +  VF S+  K + SW +M
Sbjct: 315 IDIGRWIHVYIDKK-LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAM 373

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I  +  +G AN   +LF  M +  +E D IT V  LSA S    L  G+      I K  
Sbjct: 374 IFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRH-----IFKSM 428

Query: 494 NLEGSVASSL------VDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKV 546
             +  +   L      +D+    G    A ++   +  + D ++W S++ A   HG  ++
Sbjct: 429 TQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLEL 488

Query: 547 AIDLFYK--MEAESFAPDHITFLALLYACS 574
           A + F +  M+ E   P     L+ +YA +
Sbjct: 489 A-ESFARNLMKVEPENPGSYVLLSNIYATA 517



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/549 (27%), Positives = 248/549 (45%), Gaps = 81/549 (14%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F  + +     WN ML  Y  + +P+  L+ Y  M  LG+  +++TFP ++K+CA 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------- 123
            K  + G +IHG VLK GY+   ++  SL++MYA+      A ++FDR   ++       
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 124 -----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
                                  DVV WN++IS Y+ +G   EAL LF+EM +  +  + 
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            T V  L AC  S    LG ++H+     G    + + NALI +Y++CG++  A G+   
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           L  KD VSWN+++ G+   +LY +A+  F+E+  +G+ P+ V  V+ + A   LG +  G
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 281 KELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           + +H Y  K  +   +   +  +L+DMYAKC  +    +VF  M  +   SW  +I G+A
Sbjct: 319 RWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 378

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
            +       +LF  ++  G++ D +    +L ACS                         
Sbjct: 379 MHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACS------------------------- 413

Query: 399 LNAIVDVYGKCGNIDYSRNVFESI-ESKDVVS----WTSMISSYVHNGLANEALELFYLM 453
                      G +D  R++F+S+ +  D+      +  MI    H+GL  EA E+   M
Sbjct: 414 ---------HSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTM 464

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV---DMYARC 510
               +E D +   S L A      L    EL     R    +E     S V   ++YA  
Sbjct: 465 ---PMEPDGVIWCSLLKACRRHGNL----ELAESFARNLMKVEPENPGSYVLLSNIYATA 517

Query: 511 GALDIANKV 519
           G  D   KV
Sbjct: 518 GEWDEVAKV 526



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 177/370 (47%), Gaps = 34/370 (9%)

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           Y   VF  +   + + W T++ GYA ++  + AL+L+  +   GL  +      +L +C+
Sbjct: 18  YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77

Query: 374 GLKCMSQTKEIHGYIIRKGLS--------------------------------DLVILNA 401
             K   + ++IHG++++ G                                  D+V   A
Sbjct: 78  KSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTA 137

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           ++  Y   GNI  ++ +F+ I  KDVVSW +MIS Y   G   EALELF  M + NV  D
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
             T+V+ LSA +    ++ G++++ +I   GF     + ++L+D+Y++CG ++ A  +F 
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  KD++ W ++I         K A+ LF +M     +P+ +T +++L AC+H G I+ 
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317

Query: 582 GKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           G+   + I +    +   P     L+D+  +   +E A+Q   SM +  +   W A++  
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMIFG 376

Query: 641 CRVHSNKELG 650
             +H     G
Sbjct: 377 FAMHGRANAG 386



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 3/284 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G++  A+++FD++  + V +WNAM+  Y   G     LE +  M    +  D  T 
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA  + ++ G ++H  +   G+ S   IVN+L+ +Y+KC     A  LF+ +  
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DVV WN++I  Y+      EAL LF+EM R G   N  T V+ L AC       +G  
Sbjct: 262 K-DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRW 320

Query: 182 IHAATVKSGQNLQ--VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           IH    K  +++     +  +LI MYA+CG +  A  V   + +K   SWN+M+ GF  +
Sbjct: 321 IHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMH 380

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
                    F  ++  G +PD +  V  +SA    G L  G+ +
Sbjct: 381 GRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 17/295 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  LF+ +S + V +WN ++G Y         L  +  M   G S +  T
Sbjct: 242 LYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 301

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF--IVNSLVAMYAKCYDFRKARQLFDR 118
              ++ ACA L  +D G  IH  + K   D T+   +  SL+ MYAKC D   A Q+F+ 
Sbjct: 302 IVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNS 361

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K  +  WN++I  ++  G+      LF  M++ G+  +  TFV  L AC  S    L
Sbjct: 362 MLHKS-LSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDL 420

Query: 179 GMEIHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
           G  I  +  +       L+ Y    +I +    G   EA  ++  +    D V W S+L 
Sbjct: 421 GRHIFKSMTQDYDITPKLEHY--GCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLK 478

Query: 235 GFVQNDLYCKAMQFFRELQGA-GQKPDQVCTVNAVSAS-------GRLGNLLNGK 281
              ++     A  F R L     + P     ++ + A+        ++  LLNGK
Sbjct: 479 ACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGK 533


>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
 gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
          Length = 679

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/680 (36%), Positives = 390/680 (57%), Gaps = 8/680 (1%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
            F + LQ C  S     G  IHA  V +G    +++ N LI MY +CG M EA  V  ++
Sbjct: 2   AFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKI 61

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
           E+ +  SW+ ++   V N L  +A++ +  +   G + D V  +N VSA   LG+L +G+
Sbjct: 62  ESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGR 121

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA-QDFISWTTIIAGYAQN 340
            L A     GF     + N+L++MY K   ++   + F  M   Q  +SWT +I+G+A +
Sbjct: 122 ALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFALH 181

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLM--ACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
            C   AL+ FR +  EG+  + +   S+L   ACS L  ++  K++H  I+  GL   ++
Sbjct: 182 GCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSSIV 241

Query: 399 LNAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
            N+++++YGKCG +D +R VFE   + +++++W++MI++Y  NG   +AL L+  M+   
Sbjct: 242 RNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEG 301

Query: 458 VESDSITLVSALSAAS-SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           +E D  T  S L A S +   L +G+ L+  +  KG   +  +A++L++MY R G L+ A
Sbjct: 302 LEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLEDA 361

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            +VF  +   +L+ WT++I A   HG    AIDL ++M  E    D+I FL++L+ACSH+
Sbjct: 362 LRVFEKMNHWNLVAWTALIAAFAQHGNVH-AIDLSWRMHLEGVQADNIVFLSVLHACSHA 420

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
            ++  G    + M  D+ +     HY+C+VDLL R   + EA + + SM  EP       
Sbjct: 421 VVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHMEMKT 480

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL ACRV  +   G  VA+    L P +   YVL+S+ +AA  KW +V +V+ RM   G+
Sbjct: 481 LLAACRVSGDTPRGARVARLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVQERMAKLGV 540

Query: 697 KKTPGSSWIEIGNKIHSFIARDKS-HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           KK  G S +E+ N++H F A + S HSE+ EI  +L  + + + +EGGY+  T  + H +
Sbjct: 541 KKPRGWSCVEVKNRVHQFFAGNFSWHSEAAEIEVELRRL-QAVVKEGGYIPDTGQIGHRL 599

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           EE+ K  +L  HSER+AIA+G+L+   G  I + KNLRVC DCH+  K++SR  GR +VV
Sbjct: 600 EEDGKEDLLALHSERVAIAFGLLRVPAGLPIHVVKNLRVCSDCHAVAKIISRSVGRRIVV 659

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RDA RFH FE G CSCGDYW
Sbjct: 660 RDAYRFHRFENGTCSCGDYW 679



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 222/433 (51%), Gaps = 18/433 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG++ +A  +F+K+    +F+W+ ++GA V NG   R LE Y  M   G+ +D   
Sbjct: 44  MYGKCGAMEEARAVFEKIESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVV 103

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + AC+ L  LD G  +   +   G+     + NSL+ MY K      AR+ F  M 
Sbjct: 104 LINPVSACSSLGSLDHGRALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMA 163

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVA--ALQACEDSSFETL 178
             + VV W ++IS ++  G    AL  FR+M   G+  N  TFV+  AL+AC + +    
Sbjct: 164 GDQSVVSWTAMISGFALHGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAA 223

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLTGFV 237
           G ++H   + +G +  + V N+L+ MY +CG + EA  V  +  + ++ ++W++M+  + 
Sbjct: 224 GKKLHELILDAGLDSSI-VRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYS 282

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDL 296
            N    +A+  ++++   G +PD+    + + A    G+ L  G+ LH     +G    +
Sbjct: 283 LNGDGRQALSLYKKMDLEGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKM 342

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +   L++MY +   +    RVF +M   + ++WT +IA +AQ+  ++ A++L   + LE
Sbjct: 343 VLATALINMYGRYGQLEDALRVFEKMNHWNLVAWTALIAAFAQHG-NVHAIDLSWRMHLE 401

Query: 357 GLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKC 409
           G+ AD ++  SVL ACS       GL C  +   +  + +R G +     + +VD+  +C
Sbjct: 402 GVQADNIVFLSVLHACSHAVVLEAGLSCFQEM--VADFGVRGGAAH---YSCMVDLLARC 456

Query: 410 GNIDYSRNVFESI 422
           G +  +  +  S+
Sbjct: 457 GRVAEAEELLHSM 469


>gi|30686506|ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g19720; AltName: Full=Protein DYW7
 gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein [Arabidopsis thaliana]
 gi|332191770|gb|AEE29891.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 894

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 264/846 (31%), Positives = 440/846 (52%), Gaps = 86/846 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + DA ++FD + +R +FTW+AM+GAY        V + +  M   G+  D F 
Sbjct: 124 MYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFL 183

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP +++ CA   D++ G  IH +V+K G  S   + NS++A+YAKC +   A + F RM 
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR 243

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DV+ WNS++ AY  +G+  EA+ L +EM++ G+     T+                 
Sbjct: 244 ER-DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW----------------- 285

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE----NKDSVSWNSMLTGF 236
                             N LI  Y + GK   A  ++ ++E      D  +W +M++G 
Sbjct: 286 ------------------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           + N +  +A+  FR++  AG  P+ V  ++AVSA   L  +  G E+H+ A+K GF+ D+
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV 387

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +GN+L+DMY+KC  +    +VF  +  +D  +W ++I GY Q     KA ELF  +Q  
Sbjct: 388 LVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ-- 445

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
             DA++                                +++  N ++  Y K G+   + 
Sbjct: 446 --DANLR------------------------------PNIITWNTMISGYIKNGDEGEAM 473

Query: 417 NVFESIE-----SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           ++F+ +E      ++  +W  +I+ Y+ NG  +EALELF  M  +    +S+T++S L A
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            ++L   K  +E++G ++R+  +   +V ++L D YA+ G ++ +  +F  ++TKD+I W
Sbjct: 534 CANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITW 593

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            S+I    LHG    A+ LF +M+ +   P+  T  +++ A    G ++EGKK    +  
Sbjct: 594 NSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAN 653

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
           DY + P  EH + +V L GRAN LEEA QF++ M I+    +W + L  CR+H + ++  
Sbjct: 654 DYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAI 713

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
             A+ L  L+P N     ++S ++A   K     +     R + LKK  G SWIE+ N I
Sbjct: 714 HAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLI 773

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
           H+F   D+S   +D +Y  + +++    R   Y  +       +EEE + +    HSE+ 
Sbjct: 774 HTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELW-----IEEEGREETCGIHSEKF 828

Query: 772 AIAYGVLKSTEGS--LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           A+A+G++ S+  S   IRI KNLR+C DCH   K VS+ +G ++++ D    HHF+ G C
Sbjct: 829 AMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDC 888

Query: 830 SCGDYW 835
           SC DYW
Sbjct: 889 SCKDYW 894



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 256/530 (48%), Gaps = 46/530 (8%)

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +KE  ++ +        +G  LEA      + + G      T++  L++C DS    LG 
Sbjct: 42  KKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGR 101

Query: 181 EIHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            +HA   + G      V+V   L++MYA+CG + +A  V   +  ++  +W++M+  + +
Sbjct: 102 ILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSR 158

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            + + +  + FR +   G  PD       +      G++  GK +H+  IK G  S L++
Sbjct: 159 ENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRV 218

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N+++ +YAKC  +++  + F +M  +D I+W +++  Y QN  H +A+EL + ++ EG+
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNV 418
                                                LV  N ++  Y + G  D + ++
Sbjct: 279 SP----------------------------------GLVTWNILIGGYNQLGKCDAAMDL 304

Query: 419 FESIE----SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
            + +E    + DV +WT+MIS  +HNG+  +AL++F  M  A V  +++T++SA+SA S 
Sbjct: 305 MQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSC 364

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L ++ +G E++   ++ GF  +  V +SLVDMY++CG L+ A KVF+ V+ KD+  W SM
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSM 424

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I      G    A +LF +M+  +  P+ IT+  ++     +G   E     + M  D +
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK 484

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE---PTAEVWCALLGAC 641
           +      +  ++    +    +EA +  R MQ     P +    +LL AC
Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g09040, mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/732 (32%), Positives = 409/732 (55%), Gaps = 10/732 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G + DA  LF ++S   V  WN M+  +   G     +E +  MR   +     T 
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ A  ++ +LD G  +H   +K G  S  ++ +SLV+MY+KC     A ++F+ + E
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV  WN++I  Y+ +G+  + + LF +M+  G   + +TF + L  C  S    +G +
Sbjct: 391 KNDV-FWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ 449

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            H+  +K      ++V NAL+ MYA+CG + +A  +  ++ ++D+V+WN+++  +VQ++ 
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A   F+ +   G   D  C  + + A   +  L  GK++H  ++K G   DL  G++
Sbjct: 510 ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMY+KC  +    +VF  +     +S   +IAGY+QNN   +A+ LF+ +   G++  
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPS 628

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD----LVILNAIVDVYGKCGNIDYSRN 417
            +   +++ AC   + ++   + HG I ++G S     L I  +++ +Y     +  +  
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI--SLLGMYMNSRGMTEACA 686

Query: 418 VFESIES-KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           +F  + S K +V WT M+S +  NG   EAL+ +  M    V  D  T V+ L   S LS
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
            L++G+ ++  I     +L+   +++L+DMYA+CG +  +++VF+ ++ + +++ W S+I
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           N    +G  + A+ +F  M      PD ITFL +L ACSH+G +++G+K  E+M   Y +
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI 866

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           +   +H AC+VDLLGR  +L+EA  F+ +  ++P A +W +LLGACR+H +   GEI A+
Sbjct: 867 EARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAE 926

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           KL+EL+P N   YVL+SN++A+   W+    +R  MR  G+KK PG SWI++  + H F 
Sbjct: 927 KLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFA 986

Query: 716 ARDKSHSESDEI 727
           A DKSHSE  +I
Sbjct: 987 AGDKSHSEIGKI 998



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 170/586 (29%), Positives = 294/586 (50%), Gaps = 39/586 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  V  AE+ FD + ++ V  WN+ML  Y S G+P +VL ++  +    I  + FT
Sbjct: 104 LYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFT 162

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+  CA   +++ G +IH  ++K G +   +   +LV MYAKC     AR++F+ + 
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  + V W  + S Y  +G   EA+ +F  M+  G   +   FV                
Sbjct: 223 DP-NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVT--------------- 266

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                               +I  Y R GK+ +A  +  ++ + D V+WN M++G  +  
Sbjct: 267 --------------------VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+++F  ++ +  K  +    + +SA G + NL  G  +HA AIK G  S++ +G+
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MY+KC  +    +VF  +  ++ + W  +I GYA N    K +ELF  ++  G + 
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           D     S+L  C+    +    + H  II+K L+ +L + NA+VD+Y KCG ++ +R +F
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E +  +D V+W ++I SYV +   +EA +LF  MN   + SD   L S L A + +  L 
Sbjct: 487 ERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLY 546

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +GK+++   ++ G + +    SSL+DMY++CG +  A KVF+ +    ++   ++I A  
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI-AGY 605

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
                + A+ LF +M      P  ITF  ++ AC     +  G +F
Sbjct: 606 SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/553 (26%), Positives = 265/553 (47%), Gaps = 39/553 (7%)

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
           L  G  +H   L  G DS   + N++V +YAKC     A + FD +  ++DV  WNS++S
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL--EKDVTAWNSMLS 133

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
            YS+ G+  + L  F  +    +  N +TF   L  C   +    G +IH + +K G   
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
             Y   AL+ MYA+C ++++A  V   + + ++V W  + +G+V+  L  +A+  F  ++
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
             G +PD +  V  ++   RLG L + + L                              
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLL------------------------------ 283

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
                F +M++ D ++W  +I+G+ +  C   A+E F  ++   + +    +GSVL A  
Sbjct: 284 -----FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338

Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            +  +     +H   I+ GL S++ + +++V +Y KC  ++ +  VFE++E K+ V W +
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNA 398

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MI  Y HNG +++ +ELF  M  +    D  T  S LS  ++   L+ G + +  II+K 
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
                 V ++LVDMYA+CGAL+ A ++F  +  +D + W ++I +         A DLF 
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK 518

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           +M       D     + L AC+H   + +GK+ +  +     LD      + L+D+  + 
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKC 577

Query: 613 NHLEEAYQFVRSM 625
             +++A +   S+
Sbjct: 578 GIIKDARKVFSSL 590



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 213/463 (46%), Gaps = 37/463 (7%)

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           +G  +H+ ++  G + +  + NA++ +YA+C +++ A      LE KD  +WNSML+ + 
Sbjct: 78  IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYS 136

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
                 K ++ F  L      P++      +S   R  N+  G+++H   IK G   +  
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
            G  L+DMYAKC  ++   RVF  +   + + WT + +GY +     +A+ +F  ++ EG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
              D +   +V                                  ++ Y + G +  +R 
Sbjct: 257 HRPDHLAFVTV----------------------------------INTYIRLGKLKDARL 282

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  + S DVV+W  MIS +   G    A+E F+ M +++V+S   TL S LSA   ++ 
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L  G  ++   I+ G      V SSLV MY++C  ++ A KVF  ++ K+ + W +MI  
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              +G     ++LF  M++  +  D  TF +LL  C+ S  +  G +F  I+    +L  
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSII-IKKKLAK 461

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
                  LVD+  +   LE+A Q    M  +     W  ++G+
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 2/136 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRT-VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MY KCG +  + Q+FD++ +R+ V +WN+++  Y  NG     L+ +  MR   I  D  
Sbjct: 776 MYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEI 835

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVL-KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           TF  V+ AC+    +  G KI  +++ + G ++    V  +V +  +    ++A    + 
Sbjct: 836 TFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEA 895

Query: 119 MGEKEDVVLWNSIISA 134
              K D  LW+S++ A
Sbjct: 896 QNLKPDARLWSSLLGA 911



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L+ GK ++   +  G + EG + +++VD+YA+C  +  A K F+ ++ KD+  W SM++ 
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
               G+    +  F  +      P+  TF  +L  C+    +  G++    + C      
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ----IHCSMIKMG 190

Query: 598 WPEHYAC---LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
              +  C   LVD+  + + + +A + V    ++P    W  L 
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARR-VFEWIVDPNTVCWTCLF 233


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/742 (33%), Positives = 406/742 (54%), Gaps = 31/742 (4%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N  +  + +      A +LF  M  +     +N++++ Y+A+G+  +AL  FR + R   
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAM-PRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR--- 166

Query: 157 VTNAYTFVAALQACE-DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
             +++++   L A    SS   +        VK   +      N +I+ +A  G ++ A 
Sbjct: 167 -PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSY-----NVMISSHANHGLVSLAR 220

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
                   KD+VSWN ML  +V+N    +A + F          D     +A+S +  + 
Sbjct: 221 HYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELF----------DSRTEWDAISWNALMA 270

Query: 276 NLLNGKELHAYA--IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
             +   ++        +    D+   NT++  YA+   +    R+F     +D  +WT I
Sbjct: 271 GYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAI 330

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           ++GYAQN    +A  +F  +     D + +   +++ A    + M + KE+   +  + +
Sbjct: 331 VSGYAQNGMLEEAKRVFDAMP----DKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNV 386

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
           +     N ++  Y + G +D +R +F  +  KD VSW +M+++Y   G + E L+LF  M
Sbjct: 387 ASW---NTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEM 443

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
                  +       LS  + ++ L+ G +L+  +I+ G+ +   V ++L+ MY +CG++
Sbjct: 444 GRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSM 503

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
           + A+  F  ++ +D++ W +MI     HG GK A+++F  M   S  PD IT + +L AC
Sbjct: 504 EEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAAC 563

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           SHSGL+ +G  +   M  D+ +   PEHY C++DLLGRA  L+EA   ++ M  EP + +
Sbjct: 564 SHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTM 623

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
           W ALLGA R+H N ELG   A+K+ EL+P N G YVL+SN++A+S KW+DV+++R  M  
Sbjct: 624 WGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHE 683

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            G+KK PG SWIE+ NK+H+F   D  H E ++IY  L ++  ++ ++ GYV+ T  VLH
Sbjct: 684 RGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRM-KKAGYVSATDMVLH 742

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +VEEEEK  ML  HSE+LA+AYG+LK   G  IR+ KNLRVC DCH+  K +S + GR +
Sbjct: 743 DVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLI 802

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           ++RD+NRFHHF  G CSCGDYW
Sbjct: 803 ILRDSNRFHHFRDGSCSCGDYW 824



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 183/380 (48%), Gaps = 20/380 (5%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G + +A +LFD    R VFTW A++  Y  NG    +LE   R+       +A ++
Sbjct: 303 YARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNG----MLEEAKRVFDAMPDKNAVSW 358

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ A    + ++   ++    + C   ++    N+++  YA+     +AR +F  M +
Sbjct: 359 NAMMAAYVQRRMMEEAKELFD-AMPCRNVAS---WNTMLTGYAQAGMLDEARAIFGMMPQ 414

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D V W ++++AYS  G   E L LF+EM R G   N   F   L  C D +    GM+
Sbjct: 415 K-DAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQ 473

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H+  +K+G  +  +V NAL+AMY +CG M EA     ++E +D VSWN+M+ G+ ++  
Sbjct: 474 LHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGF 533

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--VSDLQIG 299
             +A++ F  ++    KPD +  V  ++A    G +  G   + Y++ + F   +  +  
Sbjct: 534 GKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGIS-YFYSMHRDFGVATKPEHY 592

Query: 300 NTLMDMYAKCC----CVNYMGRVFYQMTAQDFISWTTII-AGYAQNNCHLKALELFRTVQ 354
             ++D+  +       VN M  + ++    D   W  ++ A     N  L      +  +
Sbjct: 593 TCMIDLLGRAGRLDEAVNLMKDMPFE---PDSTMWGALLGASRIHRNSELGRNAAEKIFE 649

Query: 355 LEGLDADVMIIGSVLMACSG 374
           LE  +A + ++ S + A SG
Sbjct: 650 LEPENAGMYVLLSNIYASSG 669



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 154/651 (23%), Positives = 266/651 (40%), Gaps = 152/651 (23%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           + G V DAE+LF  + +R+  T+N ML  Y +NG   R+ +  S  R +    D+F++  
Sbjct: 119 RAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANG---RLPQALSFFRSIP-RPDSFSYNT 174

Query: 64  VIKAC----------AMLKDLDCGAKI-----------HGLV--------LKCGYDSTDF 94
           ++ A           A+  ++     +           HGLV        L    D+  +
Sbjct: 175 LLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSW 234

Query: 95  IVNSLVAMYAKCYDFRKARQLFDRMGE------------------------------KED 124
             N ++A Y +    ++AR+LFD   E                              + D
Sbjct: 235 --NGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRD 292

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           VV WN+++S Y+  G   EA  LF     V  + + +T+ A +     S +   GM   A
Sbjct: 293 VVSWNTMVSGYARRGDMAEARRLF----DVAPIRDVFTWTAIV-----SGYAQNGMLEEA 343

Query: 185 ATVKSGQNLQVYVA-NALIAMY-------------------------------ARCGKMT 212
             V      +  V+ NA++A Y                               A+ G + 
Sbjct: 344 KRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLD 403

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
           EA  +   +  KD+VSW +ML  + Q     + +Q F+E+   G+  ++      +S   
Sbjct: 404 EARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCA 463

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
            +  L  G +LH+  IK G+     +GN L+ MY KC  +      F +M  +D +SW T
Sbjct: 464 DIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNT 523

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           +IAGYA++    +ALE+F T++      D + +  VL ACS           H  ++ KG
Sbjct: 524 MIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACS-----------HSGLVEKG 572

Query: 393 LSDLVILNA-------------IVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMI-SSY 437
           +S    ++              ++D+ G+ G +D + N+ + +    D   W +++ +S 
Sbjct: 573 ISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASR 632

Query: 438 VHNG--LANEALELFYLMNEANVESDSITLVSALSAASSL---------SILKKG-KELN 485
           +H    L   A E  + +   N  +    L+S + A+S            + ++G K++ 
Sbjct: 633 IHRNSELGRNAAEKIFELEPEN--AGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVP 690

Query: 486 GF----IIRK--GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           GF    +  K   F++  SV     D+YA    LDI  K    V   D++L
Sbjct: 691 GFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVL 741



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 172/374 (45%), Gaps = 31/374 (8%)

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
           A +    +++V   N  I  + R G++ +A  +   +  + + ++N+ML G+  N    +
Sbjct: 97  ACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQ 156

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+ FFR +     +PD       + A G   +L + + L      +  V D    N ++ 
Sbjct: 157 ALSFFRSI----PRPDSFSYNTLLHALGVSSSLADVRAL----FDEMPVKDSVSYNVMIS 208

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT-VQLEGLDADVM 363
            +A    V+     F     +D +SW  ++A Y +N    +A ELF +  + + +  + +
Sbjct: 209 SHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNAL 268

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + G V          SQ +E      +    D+V  N +V  Y + G++  +R +F+   
Sbjct: 269 MAGYVQ--------RSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAP 320

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            +DV +WT+++S Y  NG+  EA  +F  M + N    +++  + ++A     ++++ KE
Sbjct: 321 IRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKN----AVSWNAMMAAYVQRRMMEEAKE 376

Query: 484 L-NGFIIRKGFNLEGSVAS--SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           L +    R       +VAS  +++  YA+ G LD A  +F  +  KD + W +M+ A   
Sbjct: 377 LFDAMPCR-------NVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQ 429

Query: 541 HGRGKVAIDLFYKM 554
            G  +  + LF +M
Sbjct: 430 IGFSEETLQLFKEM 443



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A   F+++ +R V +WN M+  Y  +G     LE +  MR      D  T
Sbjct: 496 MYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDIT 555

Query: 61  FPCVIKACAMLKDLDCG-AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    ++ G +  + +    G  +       ++ +  +     +A  L   M
Sbjct: 556 LVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDM 615

Query: 120 GEKEDVVLWNSIISA 134
             + D  +W +++ A
Sbjct: 616 PFEPDSTMWGALLGA 630


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/690 (34%), Positives = 384/690 (55%), Gaps = 21/690 (3%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L+A    S    G+++H A  K G      + N LI MYA+CG++  A  V   + +++ 
Sbjct: 224 LRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNV 283

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK-PDQVCTVNAVSASGRLGNLLNGKELHA 285
           VSW +++ GF+Q+      ++   E++ A +  P++     ++ A     ++  G  +H 
Sbjct: 284 VSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHG 343

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF-YQMTAQDFISWTTIIAGYAQNNCHL 344
             ++ G+     + ++L+ +Y+K   +    RVF      +   +W  +I+GYA      
Sbjct: 344 LCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGR 403

Query: 345 KALELFRTVQL------EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS---D 395
            AL +FR ++       +    D     S+L AC GL    +  ++H  +   G S   +
Sbjct: 404 DALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASN 463

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
            ++  A+VD+Y KCG +  +  VFE +E K+ + WT+++  +   G   EALELF     
Sbjct: 464 AILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWR 523

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
           +   +D+  L S +   +  +++++G++++ + ++     + S  +S+VDMY +CG  D 
Sbjct: 524 SGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDE 583

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A ++F  +  ++++ WT+MIN  G HG G+ A+ +F +M A    PD +T+LALL ACSH
Sbjct: 584 AERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSH 643

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           +GL++E +++   +R D  + P  EHYAC+VDLLGRA  L EA   +R+M +EPT  VW 
Sbjct: 644 AGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQ 703

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
            LL ACRVH +  +G      LL +D  NP NYV +SNVFA +  W++  +VR  MR  G
Sbjct: 704 TLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRG 763

Query: 696 LKKTPGSSWIEIGNKIHSFI--ARDKSHSESDEIYKKLAEITEKLEREGGYVA-QTQFVL 752
           LKK  G SW+EIG ++H F     +++H ++ +I + L ++  ++  + GY A   QF L
Sbjct: 764 LKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCADDVQFAL 823

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKS-------TEGSLIRITKNLRVCVDCHSFCKLV 805
           H+V+EE + + L  HSERLA+   +L++            IR+ KNLRVC DCH F K +
Sbjct: 824 HDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCHEFFKGL 883

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S +  R LVVRDANRFH FE G CSC DYW
Sbjct: 884 SAVVRRALVVRDANRFHRFEHGTCSCKDYW 913



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/568 (26%), Positives = 279/568 (49%), Gaps = 32/568 (5%)

Query: 50  RVLGISVDAFTFPC-----------VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS 98
           R+L  +  AF FP            +++A A    L  G ++HG + K G+ S   + N+
Sbjct: 198 RLLCTNPVAFPFPTNPMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNN 257

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG-LV 157
           L+ MYAKC +   A ++F  M ++ +VV W +++  +   G     L L  EM+      
Sbjct: 258 LIDMYAKCGELDMAGEVFGGMRDR-NVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAA 316

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            N YT  A+L+AC  +     G+ IH   V++G      VA++L+ +Y++ G++ +A  V
Sbjct: 317 PNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRV 376

Query: 218 LYQLE-NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG------QKPDQVCTVNAVSA 270
                  +   +WN+M++G+        A+  FRE++          +PD+    + + A
Sbjct: 377 FDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKA 436

Query: 271 SGRLGNLLNGKELHAYAIKQGF--VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            G LG    G ++HA     GF   S+  +   L+DMY KC  +    +VF ++  ++ I
Sbjct: 437 CGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAI 496

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
            WTT++ G+AQ    ++ALELFR     G  AD  ++ S++   +    + Q +++H Y 
Sbjct: 497 QWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYG 556

Query: 389 IRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           ++    +D+   N+IVD+Y KCG  D +  +F  I +++VVSWT+MI+    +GL  EA+
Sbjct: 557 VKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAV 616

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDM 506
            +F  M    VE D +T ++ LSA S   ++ + +     I R +    +    + +VD+
Sbjct: 617 AMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDL 676

Query: 507 YARCGALDIANKVFNCVQTKDLI-LWTSMINANGLH---GRGKVAIDLFYKMEAESFAPD 562
             R G L  A  +   +  +  + +W ++++A  +H     G+ A D+   ++ +    +
Sbjct: 677 LGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGD----N 732

Query: 563 HITFLALLYACSHSGLINEGKKFLEIMR 590
            + ++ L    + +G   E  K  + MR
Sbjct: 733 PVNYVTLSNVFAEAGAWRECHKVRDAMR 760



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 258/516 (50%), Gaps = 27/516 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           MY KCG +  A ++F  +  R V +W A++  ++ +G+    L     MR     + + +
Sbjct: 261 MYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEY 320

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T    +KAC + +D+  G  IHGL ++ GY+    + +SLV +Y+K      AR++FD  
Sbjct: 321 TLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCA 380

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV------TNAYTFVAALQACEDS 173
           G    +  WN++IS Y+ +G   +AL +FREM+R           + +TF + L+AC   
Sbjct: 381 GLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGL 440

Query: 174 SFETLGMEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
                G ++HAA   SG +      +A AL+ MY +CG++  A  V  +LE K+++ W +
Sbjct: 441 GAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTT 500

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++ G  Q     +A++ FR    +G + D     + V        +  G+++H Y +K  
Sbjct: 501 VVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSP 560

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
             +D+  GN+++DMY KC   +   R+F ++ A++ +SWTT+I G  ++    +A+ +F 
Sbjct: 561 AGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFE 620

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA------IVDV 405
            ++  G++ D +   ++L ACS    + + +     I R    D  +         +VD+
Sbjct: 621 EMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRR----DRTVRPKAEHYACMVDL 676

Query: 406 YGKCGNIDYSRNVFESIESKDVVS-WTSMISS-YVHNGLA--NEALELFYLMNEANVESD 461
            G+ G +  +R++  ++  +  V  W +++S+  VH  +A   EA ++   ++  N   +
Sbjct: 677 LGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDN-PVN 735

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
            +TL +  + A +     K ++    + R+G   +G
Sbjct: 736 YVTLSNVFAEAGAWRECHKVRDA---MRRRGLKKQG 768


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/740 (32%), Positives = 408/740 (55%), Gaps = 5/740 (0%)

Query: 6    GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
            G + DA  L  ++   +   WNA++ +Y  +G    V   Y  M+  G+     TF  ++
Sbjct: 275  GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASML 334

Query: 66   KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
             A A +   D G +IH   +K G D+  F+ +SL+ +Y K      A+++FD   EK ++
Sbjct: 335  SAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEK-NI 393

Query: 126  VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
            V+WN+++  +  +    E + +F+ M+R  L  + +TFV+ L AC +     +G ++H  
Sbjct: 394  VMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCI 453

Query: 186  TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
            T+K+  +  ++VANA++ MY++ G +  A  +   +  KDSVSWN+++ G   N+   +A
Sbjct: 454  TIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEA 513

Query: 246  MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
            +   + ++  G  PD+V    A++A   +     GK++H  +IK    S+  +G++L+D+
Sbjct: 514  VYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDL 573

Query: 306  YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
            Y+K   V    +V   + A   +    +I G  QNN   +A+ELF+ V  +G        
Sbjct: 574  YSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTF 633

Query: 366  GSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNI-DYSRNVFESI 422
             S+L  C+G       K++H Y ++  L   D  +  ++V +Y KC  + D ++ + E  
Sbjct: 634  ASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVP 693

Query: 423  ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
            + K++V WT+ IS Y  NG ++++L +F+ M   +V SD  T  S L A S ++ L  GK
Sbjct: 694  DHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGK 753

Query: 483  ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL-WTSMINANGLH 541
            E++G II+ GF    + AS+L+DMY++CG +  + ++F  ++ K  I+ W SMI     +
Sbjct: 754  EIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKN 813

Query: 542  GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
            G    A+ LF KM+     PD +T L +L ACSH+GLI+EG+   + M   Y + P  +H
Sbjct: 814  GYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDH 873

Query: 602  YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
            YACL+DLLGR  HL+EA + +  +       +W   L AC++H ++E G++ AKKL+E++
Sbjct: 874  YACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEME 933

Query: 662  PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
            P     YV +S++ AA+  W + +  R  MR  G+ K PG SWI +GNK + F+ +D  H
Sbjct: 934  PQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHH 993

Query: 722  SESDEIYKKLAEITEKLERE 741
             ++  IYK L ++T  + ++
Sbjct: 994  PDTLGIYKMLDDLTGMMNKD 1013



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 176/600 (29%), Positives = 320/600 (53%), Gaps = 16/600 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G + DA+++FD  +++ +  WNAML  +V N      ++ +  MR   +  D FT
Sbjct: 371 LYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFT 430

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC  L  LD G ++H + +K   D+  F+ N+++ MY+K      A+ LF  + 
Sbjct: 431 FVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIP 490

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V WN++I   + + +  EA+ + + M+  G+  +  +F  A+ AC +      G 
Sbjct: 491 GK-DSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGK 549

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH A++K        V ++LI +Y++ G +  +  VL  ++    V  N+++TG VQN+
Sbjct: 550 QIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNN 609

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSA-SGRLGNLLNGKELHAYAIKQGFVS-DLQI 298
              +A++ F+++   G KP      + +S  +G + +++ GK++H+Y +K   ++ D  +
Sbjct: 610 REDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVI-GKQVHSYTLKSALLNQDTSL 668

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           G +L+ +Y KC  +    ++  ++   ++ + WT  I+GYAQN    ++L +F  ++   
Sbjct: 669 GISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHD 728

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSR 416
           + +D     SVL ACS +  ++  KEIHG II+ G +S     +A++D+Y KCG++  S 
Sbjct: 729 VRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSF 788

Query: 417 NVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
            +F+ +++K +++ W SMI  +  NG ANEAL LF  M E+ ++ D +TL+  L A S  
Sbjct: 789 EIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHA 848

Query: 476 SILKKGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
            ++ +G+ L +      G        + L+D+  R G L  A +V + +  + D ++W +
Sbjct: 849 GLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWAT 908

Query: 534 MINANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
            + A  +H    RGKVA     +ME +  +     FL+ L+A   +G   E K   E MR
Sbjct: 909 FLAACQMHKDEERGKVAAKKLVEMEPQRSST--YVFLSSLHAA--AGNWVEAKVAREAMR 964



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 174/626 (27%), Positives = 307/626 (49%), Gaps = 69/626 (11%)

Query: 29  MLGAYVSNGEPLRVLETYSRMRV-LGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKC 87
           +L  +  +G P  VL+ + R+R  +G + D F    V+ AC+ L  L+ G ++H  VLK 
Sbjct: 130 VLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKS 189

Query: 88  GYDSTDFIVNSLVAMYAKCYDFRKARQLFD------------------------------ 117
           G+ S+ F    LV MYAKC + + AR++FD                              
Sbjct: 190 GFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALF 249

Query: 118 ----RMGEKEDVVLWNSIIS-------------------------------AYSASGQCL 142
               +MG   D V + +IIS                               +YS SG   
Sbjct: 250 SRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLES 309

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           E  GL+++M+R GL+    TF + L A    +    G +IHAA VK G +  V+V ++LI
Sbjct: 310 EVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLI 369

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
            +Y + G +++A  V      K+ V WN+ML GFVQNDL  + +Q F+ ++ A  + D  
Sbjct: 370 NLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDF 429

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
             V+ + A   L +L  G+++H   IK    +DL + N ++DMY+K   ++    +F  +
Sbjct: 430 TFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLI 489

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
             +D +SW  +I G A N    +A+ + + ++  G+  D +   + + ACS ++     K
Sbjct: 490 PGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGK 549

Query: 383 EIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
           +IH   I+  + S+  + ++++D+Y K G+++ SR V   +++  +V   ++I+  V N 
Sbjct: 550 QIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNN 609

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG-FNLEGSVA 500
             +EA+ELF  + +   +  + T  S LS  +       GK+++ + ++    N + S+ 
Sbjct: 610 REDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLG 669

Query: 501 SSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            SLV +Y +C  L+ ANK+   V   K+L+ WT+ I+    +G    ++ +F++M +   
Sbjct: 670 ISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDV 729

Query: 560 APDHITFLALLYACSHSGLINEGKKF 585
             D  TF ++L ACS    + +GK+ 
Sbjct: 730 RSDEATFASVLKACSEIAALTDGKEI 755



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/513 (23%), Positives = 245/513 (47%), Gaps = 39/513 (7%)

Query: 76  CGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA-RQLFDRMGEKEDVVLWNSIISA 134
           CG  +H  VL+ G      + ++LV +Y +      A R L    G        +S++S 
Sbjct: 75  CGV-LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSC 133

Query: 135 YSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
           ++ SG   + L  F+ ++  +G   + +     L AC        G ++H   +KSG   
Sbjct: 134 HARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCS 193

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
             +    L+ MYA+C ++ +A  V   +   D++ W SM+ G+ +   Y +A+  F  ++
Sbjct: 194 SAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRME 253

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
             G  PDQV  V  +S    +G L + + L         +  +Q+ +T            
Sbjct: 254 KMGSAPDQVTYVTIISTLASMGRLSDARTL---------LKRIQMPST------------ 292

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
                         ++W  +I+ Y+Q+    +   L++ ++ +GL        S+L A +
Sbjct: 293 --------------VAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAA 338

Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            +    + ++IH   ++ GL +++ + ++++++Y K G I  ++ VF+    K++V W +
Sbjct: 339 SMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNA 398

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           M+  +V N L  E +++F  M  A++E+D  T VS L A  +L  L  G++++   I+  
Sbjct: 399 MLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNS 458

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
            + +  VA++++DMY++ GA+D+A  +F+ +  KD + W ++I     +   + A+ +  
Sbjct: 459 MDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLK 518

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           +M+    APD ++F   + ACS+      GK+ 
Sbjct: 519 RMKCYGIAPDEVSFATAINACSNIRATETGKQI 551



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 4/208 (1%)

Query: 384 IHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFE--SIESKDVVSWTSMISSYVHN 440
           +H  ++R GL     L +A+VD+YG+ G + Y+       +       + +S++S +  +
Sbjct: 78  LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137

Query: 441 GLANEALELFYLMN-EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           G   + L+ F  +        D   L   LSA S L  L++G++++  +++ GF      
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            + LVDMYA+C  +  A +VF+ +   D I W SMI      GR + A+ LF +ME    
Sbjct: 198 QAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGS 257

Query: 560 APDHITFLALLYACSHSGLINEGKKFLE 587
           APD +T++ ++   +  G +++ +  L+
Sbjct: 258 APDQVTYVTIISTLASMGRLSDARTLLK 285


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/677 (34%), Positives = 392/677 (57%), Gaps = 6/677 (0%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           IHG ++  G  S  F+ N L+ + +K      AR +FD+M  K +++ W+S++S YS  G
Sbjct: 71  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHK-NLITWSSMVSMYSQQG 129

Query: 140 QCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
              EAL +F ++QR  G   N +   + ++AC        G ++H   V+SG +  VYV 
Sbjct: 130 YSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 189

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
            +LI  Y++ G + EA  V  QL  K +V+W +++ G+ +      +++ F +++     
Sbjct: 190 TSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVV 249

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           PD+    + +SA   L  L  GK++HAY +++G   D+ + N L+D Y KC  V    ++
Sbjct: 250 PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKL 309

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F QM  ++ ISWTT+I+GY QN+   +A++LF  +   G   D     SVL +C   + +
Sbjct: 310 FDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREAL 369

Query: 379 SQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
            Q +++H Y I+  L SD  + N ++D+Y K   +  ++ VF+ +  ++V+S+ +MI  Y
Sbjct: 370 EQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGY 429

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
                 +EALELF+ M     + +  T  + ++AAS+L+ L+ G++ +  +++ G +   
Sbjct: 430 SSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCP 489

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            V ++LVDMYA+CG+++ A K+FN    +D++ W SMI+ +  HG  + A+ +F +M  E
Sbjct: 490 FVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKE 549

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              P+++TF+A+L ACSH+G + +G      M   + + P  EHYAC+V LLGR+  L E
Sbjct: 550 GIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFE 608

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           A +F+  M IEP A VW +LL ACR+  N ELG+  A+  +  DP + G+Y+L+SN+FA+
Sbjct: 609 AKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFAS 668

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
              W DV++VR RM  S + K PG SWIE+ NK++ FIARD +H E+D     + +I  +
Sbjct: 669 KGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREAD--IGSVLDILIQ 726

Query: 738 LEREGGYVAQTQFVLHN 754
             +  GYV     +L N
Sbjct: 727 HIKGAGYVPDATALLMN 743



 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 170/555 (30%), Positives = 291/555 (52%), Gaps = 11/555 (1%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFTFP 62
           K   V +A  +FDK+  + + TW++M+  Y   G     L  +  + R  G   + F   
Sbjct: 96  KSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLA 155

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
            VI+AC  L  ++ GA++HG V++ G+D   ++  SL+  Y+K  +  +AR +FD++ EK
Sbjct: 156 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 215

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
              V W +II+ Y+  G+   +L LF +M+   +V + Y   + L AC    F   G +I
Sbjct: 216 -TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQI 274

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA  ++ G  + V V N LI  Y +C ++     +  Q+  K+ +SW +M++G++QN   
Sbjct: 275 HAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFD 334

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +AM+ F E+   G KPD     + +++ G    L  G+++HAY IK    SD  + N L
Sbjct: 335 WEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGL 394

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMYAK   +    +VF  M  Q+ IS+  +I GY+      +ALELF  +++     + 
Sbjct: 395 IDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNE 454

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFES 421
               +++ A S L  +   ++ H  +++ GL     + NA+VD+Y KCG+I+ +R +F S
Sbjct: 455 FTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNS 514

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
              +DVV W SMIS++  +G A EAL +F  M +  ++ + +T V+ LSA S    ++ G
Sbjct: 515 SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDG 574

Query: 482 KELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMINAN 538
             LN F    GF ++      + +V +  R G L  A +    +  +   I+W S+++A 
Sbjct: 575 --LNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSAC 632

Query: 539 GLHGR---GKVAIDL 550
            + G    GK A ++
Sbjct: 633 RIAGNVELGKYAAEM 647



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 229/441 (51%), Gaps = 11/441 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G++ +A  +FD++S++T  TW  ++  Y   G     LE +++MR   +  D +  
Sbjct: 196 YSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVV 255

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ AC+ML+ L+ G +IH  VL+ G +    +VN L+  Y KC   +  R+LFD+M  
Sbjct: 256 SSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVV 315

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K +++ W ++IS Y  +    EA+ LF EM R+G   + +   + L +C        G +
Sbjct: 316 K-NIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ 374

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA T+K+      +V N LI MYA+   + +A  V   +  ++ +S+N+M+ G+   + 
Sbjct: 375 VHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEK 434

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ F E++   QKP++      ++A+  L +L +G++ H   +K G      + N 
Sbjct: 435 LSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNA 494

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC  +    ++F     +D + W ++I+ +AQ+    +AL +FR +  EG+  +
Sbjct: 495 LVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPN 554

Query: 362 VMIIGSVLMACSGL----KCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
            +   +VL ACS        ++    + G+ I+ G         +V + G+ G +  ++ 
Sbjct: 555 YVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYA---CVVSLLGRSGKLFEAKE 611

Query: 418 VFE--SIESKDVVSWTSMISS 436
             E   IE   +V W S++S+
Sbjct: 612 FIEKMPIEPAAIV-WRSLLSA 631



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 201/370 (54%), Gaps = 5/370 (1%)

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           LQ    +P +    N +  S     +++ K +H   I  G  SD  + N L+++ +K   
Sbjct: 40  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLM 370
           V+    VF +M  ++ I+W+++++ Y+Q     +AL +F  +Q + G   +  ++ SV+ 
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159

Query: 371 ACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           AC+ L  + +  ++HG+++R G   D+ +  +++D Y K GNI+ +R VF+ +  K  V+
Sbjct: 160 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVT 219

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           WT++I+ Y   G +  +LELF  M E NV  D   + S LSA S L  L+ GK+++ +++
Sbjct: 220 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVL 279

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           R+G  ++ SV + L+D Y +C  +    K+F+ +  K++I WT+MI+    +     A+ 
Sbjct: 280 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMK 339

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDL 608
           LF +M    + PD     ++L +C     + +G++     ++ + + D + ++   L+D+
Sbjct: 340 LFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKN--GLIDM 397

Query: 609 LGRANHLEEA 618
             ++N L +A
Sbjct: 398 YAKSNLLIDA 407



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 127/236 (53%), Gaps = 2/236 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   ++DA+++FD ++++ V ++NAM+  Y S  +    LE +  MRV     + FT
Sbjct: 397 MYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFT 456

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +I A + L  L  G + H  ++K G D   F+ N+LV MYAKC    +AR++F+   
Sbjct: 457 FAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSI 516

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV WNS+IS ++  G+  EALG+FREM + G+  N  TFVA L AC  +     G+
Sbjct: 517 WR-DVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGL 575

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
               +    G          ++++  R GK+ EA   + ++     ++ W S+L+ 
Sbjct: 576 NHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 631



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 81/161 (50%), Gaps = 5/161 (3%)

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           K ++G II  G   +  +A+ L+++ ++   +D A  VF+ +  K+LI W+SM++     
Sbjct: 69  KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 128

Query: 542 GRGKVAIDLFYKMEAESFA-PDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWP 599
           G  + A+ +F  ++ +S   P+     +++ AC+  G++ +G +    ++R  +  D + 
Sbjct: 129 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 188

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
                L+D   +  ++EEA + V     E TA  W  ++  
Sbjct: 189 G--TSLIDFYSKNGNIEEA-RLVFDQLSEKTAVTWTTIIAG 226


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/737 (32%), Positives = 403/737 (54%), Gaps = 65/737 (8%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEA-------- 214
           + + L+ C +S  +T   ++H   +K+ +  + +++N LI  Y + G +  A        
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 215 ----------------AGVLYQLEN-------KDSVSWNSMLTGFVQNDLYCKAMQFFR- 250
                            G+L Q++        +D VSWN  ++G+        A++ ++ 
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK-- 308
            L+ A    +++     +    +   +  G++++   +K GF SD+ +G+ L+DMY K  
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187

Query: 309 -----------------------------CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
                                        C  +    R+F  +  +D ISWT +I G  Q
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL 399
           N    +AL++FR ++L G   D    GSVL AC  L  + + K+IH Y+IR    D V +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307

Query: 400 -NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            +A+VD+Y KC +I  +  VF+ +  K+V+SWT+M+  Y  NG + EA+++F+ M    V
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           E D  TL S +S+ ++L+ L++G + +   +  G     +V+++L+ +Y +CG+ + +++
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHR 427

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           +F  +  +D + WT+++      G+    I LF +M A    PD +TF+ +L ACS +GL
Sbjct: 428 LFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGL 487

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           + +G ++ E M  ++ + P  +H  C++DLLGRA  LEEA  F+ +M   P    W  LL
Sbjct: 488 VEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLL 547

Query: 639 GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
            +CRVH + E+G+  A  L+ L+P NP +YVL+S+++A+  KW  V Q+R  MR   ++K
Sbjct: 548 SSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRK 607

Query: 699 TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
            PG SWI+   K+H F A D+S     +IY +L ++  K+  E GYV     VLH+VEE 
Sbjct: 608 EPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEE-GYVPDMSSVLHDVEES 666

Query: 759 EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
           EK++ML  HSE+LAIA+G++    G  IR+ KNLRVC DCH+  K +S++  RE++VRDA
Sbjct: 667 EKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDA 726

Query: 819 NRFHHFEAGVCSCGDYW 835
            RFH F+ G CSCGD+W
Sbjct: 727 VRFHLFKDGTCSCGDFW 743



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 158/580 (27%), Positives = 272/580 (46%), Gaps = 70/580 (12%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++K C   ++     K+H L+LK       F+ N+L+  Y K  +   A  +FD + 
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 121 EK------------------------------EDVVLWNSIISAYSASGQCLEALGLFRE 150
           +                                D V WN  IS Y+  G C +A+ +++ 
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 151 MQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA--- 206
           M +   +  N  TF   L  C       LG +I+   +K G    V+V + L+ MY    
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187

Query: 207 ----------------------------RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
                                       RCG + E+  +   L+ +DS+SW  M+TG +Q
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N L  +A+  FRE++ AG   DQ    + ++A G L  L  GK++HAY I+     ++ +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G+ L+DMY+KC  +     VF +M  ++ ISWT ++ GY QN    +A+++F  +Q  G+
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
           + D   +GSV+ +C+ L  + +  + H   +  GL S + + NA++ +YGKCG+ + S  
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHR 427

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  +  +D VSWT++++ Y   G ANE + LF  M    ++ D +T +  LSA S   +
Sbjct: 428 LFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGL 487

Query: 478 LKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMI 535
           ++KG +     I   G        + ++D+  R G L+ A    N +    D++ W +++
Sbjct: 488 VEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLL 547

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           ++  +HG    GK A D    +E ++  P     L+ LYA
Sbjct: 548 SSCRVHGDMEIGKWAADSLIALEPQN--PASYVLLSSLYA 585



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 228/470 (48%), Gaps = 34/470 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           +Y K G +   +Q+F+ +  R   +WN  +  Y + G     +  Y  M +   ++++  
Sbjct: 80  VYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRI 139

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  ++  C+  + +D G +I+G +LK G+ S  F+ + LV MY K      A++ FD M
Sbjct: 140 TFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEM 199

Query: 120 GEK------------------------------EDVVLWNSIISAYSASGQCLEALGLFR 149
            E+                               D + W  +I+    +G   EAL +FR
Sbjct: 200 PERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFR 259

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EM+  G   + +TF + L AC        G +IHA  +++     V+V +AL+ MY++C 
Sbjct: 260 EMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCR 319

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            +  A  V  ++  K+ +SW +ML G+ QN    +A++ F E+Q  G +PD     + +S
Sbjct: 320 SIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVIS 379

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           +   L +L  G + H  A+  G +S + + N L+ +Y KC       R+F +M  +D +S
Sbjct: 380 SCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVS 439

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           WT ++AGYAQ     + + LF  +   GL  D +    VL ACS    + +  +    +I
Sbjct: 440 WTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMI 499

Query: 390 RK-GLSDLVI-LNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
           ++ G+  +V     I+D+ G+ G ++ +RN   ++    DVV W +++SS
Sbjct: 500 KEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSS 549


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/751 (31%), Positives = 414/751 (55%), Gaps = 30/751 (3%)

Query: 1   MYGKCGSVLDAEQLFDK-----VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS 55
           +Y KCG+  DA ++FD+     VS   V  WN+++  Y   G+    +  + RM+  G  
Sbjct: 97  IYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYK 156

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
                                G +IH  +++   +   F+  +L+  Y KC    +AR L
Sbjct: 157 E--------------------GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYL 196

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALG--LFREMQRVGLVTNAYTFVAALQACEDS 173
           F ++ ++ ++V WN +I  +  +G    +L   L  + + V +V++++T    L AC   
Sbjct: 197 FKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFT--CTLSACGQG 254

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
            F + G ++H   +K G     YV  +L+ MY +C  +  A  V  ++ +K+   WN+++
Sbjct: 255 EFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALI 314

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           + +V N     A++ +++++      D    +N +++S   G    G+ +H   +K+   
Sbjct: 315 SAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQ 374

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S + I + L+ MY+K    NY   +F  M  +D ++W ++I+G+ QN  + +AL+ FR +
Sbjct: 375 SSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAM 434

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
           + + +  D  I+ S++ AC+GL+ +     IHG++I+ GL  D+ + ++++D+Y K G  
Sbjct: 435 EADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFP 494

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + + N+F  +  K++V+W S+IS Y  N L + ++ LF  +   ++  DS++  S L+A 
Sbjct: 495 ERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAI 554

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           SS++ L KGK ++G+++R     +  V ++L+DMY +CG L  A  +F  +  K+L+ W 
Sbjct: 555 SSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWN 614

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           SMI   G HG    AI+LF +M +    PD +TFL+LL +C+HSGLI EG    E+M+  
Sbjct: 615 SMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMK 674

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
           + ++P  EHY  +VDL GRA  L +AY FV++M +EP   +W +LL +C++H N ELGE+
Sbjct: 675 FGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEM 734

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
           VA KLL ++P    NYV + N++  +  W     +R  M+  GLKKTPG SWIE+ NK+ 
Sbjct: 735 VANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVD 794

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGG 743
            F + D S   + EIY  L+ +   + ++G 
Sbjct: 795 VFYSGDCSSPITTEIYDTLSSLKRNMIKKGA 825



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 281/531 (52%), Gaps = 26/531 (4%)

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           FT+P ++KACA L +L  G  IH  ++  G  S  +I +SL+ +Y KC  F  A ++FD+
Sbjct: 54  FTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQ 113

Query: 119 MGEK----EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           + +     +DV +WNSII  Y   GQ  E +  F  MQ  G                   
Sbjct: 114 LPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKE---------------- 157

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS-VSWNSML 233
               G +IH+  V++  N   ++  ALI  Y +CG+ TEA  +  +L+++ + V+WN M+
Sbjct: 158 ----GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMI 213

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            GF +N L+  +++++   +    K         +SA G+   +  GK++H  AIK GF 
Sbjct: 214 GGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFE 273

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            D  +  +L+ MY KC  +    +VF ++  ++   W  +I+ Y  N     AL +++ +
Sbjct: 274 DDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQM 333

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
           +L  + +D   I +VL + S        + IH  I+++ L S + I +A++ +Y K G+ 
Sbjct: 334 KLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDS 393

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           +Y+ ++F +++ +DVV+W S+IS +  N    EAL+ F  M    V+ DS  + S +SA 
Sbjct: 394 NYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISAC 453

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           + L  +  G  ++GF+I+ G  L+  VASSL+DMY++ G  + A  +F+ +  K+L+ W 
Sbjct: 454 TGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWN 513

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           S+I+    +    ++I+LF ++      PD ++F ++L A S    + +GK
Sbjct: 514 SIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGK 564


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/682 (35%), Positives = 392/682 (57%), Gaps = 5/682 (0%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           + L  G  +H  ++K    S  +I NSLV +YAKC   R+A+ +F+R+  K DVV WN I
Sbjct: 20  RSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNK-DVVSWNCI 77

Query: 132 ISAYSASGQCLEA--LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           I+ YS  G    +  + LF+ M+      NA+TF     A         G   HA  +K 
Sbjct: 78  INGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKM 137

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
                V+V ++L+ MY + G   EA  V   +  ++SVSW +M++G+    L  +A+  F
Sbjct: 138 DSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLF 197

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           R ++   +  ++    + +SA      + NGK++H  A+K G +S + +GN L+ MYAKC
Sbjct: 198 RLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKC 257

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             ++   + F   + ++ I+W+ +I GYAQ+    KAL+LF ++ L G+         V+
Sbjct: 258 GSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVI 317

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            ACS L    + K++H Y+++ G  S + ++ A+VD+Y KC +I  +R  F+ ++  D+V
Sbjct: 318 NACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIV 377

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
            WTSMI  YV NG   +AL L+  M    +  + +T+ S L A SSL+ L++GK+++   
Sbjct: 378 LWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHART 437

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           ++ GF LE  + S+L  MYA+CG L     VF  +  +D+I W +MI+    +G GK A+
Sbjct: 438 VKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEAL 497

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
           +LF +M+ E   PD++TF+ +L ACSH GL+  G  +  +M  ++ +DP  EHYAC+VD+
Sbjct: 498 ELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDI 557

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
           L RA  L+EA +F  S  I+    +W  +LGACR + N ELG    +KL+EL       Y
Sbjct: 558 LSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAY 617

Query: 669 VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
           VL+S++++A  +W+DVE+VR  M+  G+ K PG SWIE+ + +H F+ +D+ H +  +I+
Sbjct: 618 VLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIH 677

Query: 729 KKLAEITEKLEREGGYVAQTQF 750
            +L +++++++ EG   A   F
Sbjct: 678 VELRQLSKQMKDEGYEPATDSF 699



 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 175/544 (32%), Positives = 288/544 (52%), Gaps = 10/544 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEP--LRVLETYSRMRVLGISVDA 58
           +Y KC  + +A+ +F+++  + V +WN ++  Y  +G      V+E + RMR    + +A
Sbjct: 49  LYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNA 108

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            TF  V  A + L D   G   H + +K       F+ +SL+ MY K     +AR++FD 
Sbjct: 109 HTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDT 168

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M E+  V  W ++IS Y++     EALGLFR M+R     N + F + L A         
Sbjct: 169 MPERNSVS-WATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNN 227

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G +IH   VK+G    V V NAL+ MYA+CG + +A        +K+S++W++M+TG+ Q
Sbjct: 228 GKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQ 287

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +    KA++ F  +  +G +P +   V  ++A   LG    GK++H Y +K GF S + +
Sbjct: 288 SGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYV 347

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
              L+DMYAKC  +    + F  +   D + WT++I GY QN  +  AL L+  +++EG+
Sbjct: 348 MTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGI 407

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             + + + SVL ACS L  + Q K+IH   ++ G   ++ I +A+  +Y KCG +     
Sbjct: 408 LPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTL 467

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  + ++DV+SW +MIS    NG   EALELF  M     + D +T V+ LSA S + +
Sbjct: 468 VFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGL 527

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD--LILWTS 533
           +++G      +  + F ++  V   + +VD+ +R G L  A + F    T D  + LW  
Sbjct: 528 VERGWGYFRMMFDE-FGMDPRVEHYACMVDILSRAGKLKEAIE-FTESATIDHGMCLWRI 585

Query: 534 MINA 537
           ++ A
Sbjct: 586 ILGA 589


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/697 (34%), Positives = 386/697 (55%), Gaps = 28/697 (4%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L+A   SS    G ++H A +K G      + N LI MYA+CG++  A  V   +  ++ 
Sbjct: 11  LRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNV 70

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHA 285
           VSW +++ GF+++    + ++    ++      P++     ++ A G +G++  G  +H 
Sbjct: 71  VSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHG 130

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
             ++ GF     + N+L+ +Y+K   +    RVF     ++ ++W  +I+GYA       
Sbjct: 131 ACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRD 190

Query: 346 ALELFRTVQL-----EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS---DLV 397
           +L +FR +Q      E    D     S+L AC  L    +  ++H  ++ +G+S   + +
Sbjct: 191 SLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAI 250

Query: 398 ILNAIVDVYGKCGNI-DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           +  A++D+Y KC  +   +  VF  +E K+ + WT++I  +   G   EA+ELF     +
Sbjct: 251 LAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSS 310

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            V +D   L S +   +  +++++G++++ + ++    L+ SVA+SL+DMY +CG  D A
Sbjct: 311 GVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEA 370

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            + F  V  ++++ WT+MIN  G HG G+ AI +F +M AE   PD + +LALL ACSHS
Sbjct: 371 ARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHS 430

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           GL+ E +++   +R D +L P  EHYAC+VDLLGRA  L EA   V +M + PT  VW  
Sbjct: 431 GLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQT 490

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL ACRVH N  +G    + LL +D  NP NYV++SN+FA +  W++ ++VR  MR  GL
Sbjct: 491 LLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGL 550

Query: 697 KKTPGSSWIEIGNKIHSFI-ARDKSHSESDEIYKKLAEITEKLEREGGY-----VAQTQF 750
           +K  G SW+E+G + H F    D SH  + +I   L ++   +    GY      + ++ 
Sbjct: 551 RKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGYSPGSSSSSSEA 610

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAY------------GVLKSTEGSLIRITKNLRVCVDC 798
            LH+V+EE + + L  HSERLA+              G+  +    +IR+ KNLRVC DC
Sbjct: 611 ALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLRVCGDC 670

Query: 799 HSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           H F K +S + GR LVVRDANRFH FE GVCSC DYW
Sbjct: 671 HEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 256/492 (52%), Gaps = 17/492 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++A A    +  GA++HG +LK G+ S   + N+L+ MYAKC + R A ++F  M E+ 
Sbjct: 10  MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPER- 68

Query: 124 DVVLWNSIISAYSASG---QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +VV W +++  +   G   +CL  LG  R +  V    N +T  A+L+AC        G+
Sbjct: 69  NVVSWTALMVGFLRHGDARECLRLLGAMRSLSDV--APNEFTLSASLKACGVVGDMAAGV 126

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH A V++G      VAN+L+ +Y++ G++ +A  V      ++ V+WN+M++G+    
Sbjct: 127 WIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAG 186

Query: 241 LYCKAMQFFRELQGAGQ-----KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--V 293
               ++  FRE+Q   Q     +PD+    + + A G LG    G ++HA  + +G    
Sbjct: 187 HGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTA 246

Query: 294 SDLQIGNTLMDMYAKCCCVNYMG-RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
           S+  +   L+DMY KC C+  M  +VF ++  ++ I WTT+I G+AQ     +A+ELF  
Sbjct: 247 SNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGR 306

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGN 411
               G+ AD  ++ SV+   +    + Q +++H Y ++     D+ + N+++D+Y KCG 
Sbjct: 307 FWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGL 366

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
            D +   F  + +++VVSWT+MI+    +G   EA+ +F  M    VE D +  ++ LSA
Sbjct: 367 TDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSA 426

Query: 472 ASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI- 529
            S   ++++ +     I   +         + +VD+  R G L  A  +   +     + 
Sbjct: 427 CSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVG 486

Query: 530 LWTSMINANGLH 541
           +W ++++A  +H
Sbjct: 487 VWQTLLSACRVH 498



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 253/512 (49%), Gaps = 20/512 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           MY KCG +  A ++F  + +R V +W A++  ++ +G+    L     MR L  ++ + F
Sbjct: 48  MYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEF 107

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T    +KAC ++ D+  G  IHG  ++ G++    + NSLV +Y+K      AR++FD  
Sbjct: 108 TLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGT 167

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-----GLVTNAYTFVAALQACEDSS 174
             + ++V WN++IS Y+ +G   ++L +FREMQ+          + +TF + L+AC    
Sbjct: 168 VFR-NLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLG 226

Query: 175 FETLGMEIHAATVKSGQNL--QVYVANALIAMYARCG-KMTEAAGVLYQLENKDSVSWNS 231
               G ++HAA V  G +      +A AL+ MY +C   +  A  V  +LE K+++ W +
Sbjct: 227 AAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTT 286

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++ G  Q     +AM+ F     +G + D     + V        +  G+++H Y +K  
Sbjct: 287 VIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTP 346

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
              D+ + N+L+DMY KC   +   R F ++ A++ +SWT +I G  ++    +A+ +F 
Sbjct: 347 AGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFE 406

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKC 409
            ++ EG++ D +   ++L ACS    + + +     I   R+          +VD+ G+ 
Sbjct: 407 EMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRA 466

Query: 410 GNIDYSRNVFESIESKDVVS-WTSMISS-YVHNG--LANEALELFYLMNEANVESDSITL 465
           G +  ++++  ++     V  W +++S+  VH    +  EA E    ++  N   + + L
Sbjct: 467 GELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDN-PVNYVML 525

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
            +  + A      ++ + + G + R+G   +G
Sbjct: 526 SNIFAEAGD---WRECQRVRGAMRRRGLRKQG 554


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/660 (36%), Positives = 368/660 (55%), Gaps = 43/660 (6%)

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTE---AAGVLYQLENKDSVSWNSMLTGF 236
           ++IHA  +K+  +   +V   L+     C    +   A  V  ++ + D+  WN+M+  +
Sbjct: 20  IQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAY 79

Query: 237 VQNDLYCKAMQFFRELQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           + +    ++M  F +++     P D       + A GRL +  NG++LH   +K G  SD
Sbjct: 80  LNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSD 139

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           L +   L++MYAK   +     +  +M   D + +  ++A Y +                
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVR---------------- 183

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYS 415
                    +G + +A             H    R    DLV  N ++  +   G++  +
Sbjct: 184 ---------VGEINLA-------------HDLFDRMPERDLVSWNTMIHGHASLGDVGTA 221

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           + +F+    +D++SW+SMI++Y     +NEAL LF+ M  ANV  D +T+VS LSA   +
Sbjct: 222 KKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDV 281

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             L  GK ++  I R    ++  + +SLVDMYA+CG +D + +VFN +  +D+  W++MI
Sbjct: 282 GALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMI 341

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
                HG G++A+D F KM +E   P+ +TF+ +L ACSH GL++EG  +   M   Y +
Sbjct: 342 MGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDV 401

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
            P  EHY C+VD+LGRA  L+EA + ++SM   P A VW ALLGACR++ N E+ E    
Sbjct: 402 SPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATV 461

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
            LLEL+P   GNYVL+SN+++ +++W  V  VR  M+   ++K PGSS IE+ N +H F+
Sbjct: 462 NLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFV 521

Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
           A D+SH ES +I + L+EIT +L +  GY   T  VL + +E+EK   L  HSE+LAIA+
Sbjct: 522 AGDQSHPESKKILRMLSEITARL-KANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAF 580

Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G+L +  GS IRI KNLRVC DCH   KL+SR + R ++VRD NRFHHF  G CSC DYW
Sbjct: 581 GLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 147/330 (44%), Gaps = 62/330 (18%)

Query: 8   VLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFTFPCVIK 66
           +L A  +FD++     F WN M+ AY+++  P   +  + +MR    I +D+++   VI+
Sbjct: 54  LLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQ 113

Query: 67  ACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ------------ 114
           AC  LKD   G K+H  VLK G  S  F+  +L+ MYAK  D   AR             
Sbjct: 114 ACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVP 173

Query: 115 -------------------LFDRMGEKE------------------------------DV 125
                              LFDRM E++                              D+
Sbjct: 174 YNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDL 233

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           + W+S+I+AY+ + Q  EAL LF EMQ   ++ +  T V+ L AC D     +G  IH  
Sbjct: 234 ISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHEC 293

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
             ++   + + +  +L+ MYA+CG +  +  V   + N+D  +W++M+ G   +     A
Sbjct: 294 IERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELA 353

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
           +  F ++     KP+ V  +  +SA   +G
Sbjct: 354 LDHFSKMISEDIKPNDVTFIGVLSACSHIG 383



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 220/510 (43%), Gaps = 99/510 (19%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCY---DFRKARQLFDRMGEKEDVVLWNSIISAY 135
           +IH L++K   D  +F++  L+     C    D   AR +FD +    D  +WN++I AY
Sbjct: 21  QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEI-PSPDTFIWNTMIRAY 79

Query: 136 SASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
             S    E++ LF +M+    +  ++Y+    +QAC        G ++H   +K G    
Sbjct: 80  LNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSD 139

Query: 195 VYVANALIAMYA-------------------------------RCGKMTEAAGVLYQLEN 223
           ++V  ALI MYA                               R G++  A  +  ++  
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPE 199

Query: 224 KDSVSWNSMLTGFV----------------QNDL---------YCKAMQ------FFREL 252
           +D VSWN+M+ G                  + DL         Y KA Q       F E+
Sbjct: 200 RDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEM 259

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           Q A   PD+V  V+ +SA G +G L  GK +H    +     DL++G +L+DMYAKC  +
Sbjct: 260 QLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDI 319

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA-DVMIIGSVLMA 371
           +   RVF  M  +D  +W+ +I G A +     AL+ F  +  E +   DV  IG VL A
Sbjct: 320 DNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIG-VLSA 378

Query: 372 CSGL----------KCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES 421
           CS +            MS+  ++   I   G         +VD+ G+ G +  +  + +S
Sbjct: 379 CSHIGLVDEGWTYFTSMSKVYDVSPKIEHYG--------CVVDILGRAGRLQEAMELIKS 430

Query: 422 IE-SKDVVSWTSMISS---YVHNGLANEA-LELFYLMNEANVESDSITLVSALSAASSLS 476
           +  + D + W +++ +   Y +  +A EA + L  L  E +V+ + + L +  S A    
Sbjct: 431 MPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLEL--EPHVDGNYVLLSNIYSQAKEWD 488

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
                K +N   + K  N++    SS +++
Sbjct: 489 -----KVVNVRRMMKNINIQKVPGSSSIEV 513



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 143/311 (45%), Gaps = 21/311 (6%)

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYG--KCGNIDYSRNV 418
           MI   V+        ++Q  +IH  II+  L  ++ V+   +  ++      ++ Y+R+V
Sbjct: 1   MIGKKVMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSV 60

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN-VESDSITLVSALSAASSLSI 477
           F+ I S D   W +MI +Y+++    E++ LF+ M     +  DS +L   + A   L  
Sbjct: 61  FDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKD 120

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
              G++L+  +++ G   +  V ++L++MYA+ G ++IA  + + +   DL+ +  ++  
Sbjct: 121 PGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAE 180

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
               G   +A DLF +M       D +++  +++  +  G +   KK  +   C+  L  
Sbjct: 181 YVRVGEINLAHDLFDRMPER----DLVSWNTMIHGHASLGDVGTAKKLFD-RTCERDLIS 235

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIE---PTAEVWCALLGAC----RVHSNKELG 650
           W    + ++    +A    EA +    MQ+    P      ++L AC     +   K + 
Sbjct: 236 W----SSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIH 291

Query: 651 EIVAKKLLELD 661
           E + +  +E+D
Sbjct: 292 ECIERNRIEID 302



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 15/240 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           +   G V  A++LFD+  +R + +W++M+ AY    +    L  +  M++  +  D  T 
Sbjct: 212 HASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTM 271

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ AC  +  L  G  IH  + +   +    +  SLV MYAKC D   + ++F+ M  
Sbjct: 272 VSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNN 331

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DV  W+++I   +  G    AL  F +M    +  N  TF+  L AC        G  
Sbjct: 332 R-DVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWT 390

Query: 182 IHAATVKSGQNLQVYVANALIAMY-------ARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
              +  K      VY  +  I  Y        R G++ EA  ++  +    D++ W ++L
Sbjct: 391 YFTSMSK------VYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALL 444



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 3/136 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + ++ ++F+ ++ R VF W+AM+    ++G     L+ +S+M    I  +  T
Sbjct: 312 MYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVT 371

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN--SLVAMYAKCYDFRKARQLFDR 118
           F  V+ AC+ +  +D G      + K  YD +  I +   +V +  +    ++A +L   
Sbjct: 372 FIGVLSACSHIGLVDEGWTYFTSMSKV-YDVSPKIEHYGCVVDILGRAGRLQEAMELIKS 430

Query: 119 MGEKEDVVLWNSIISA 134
           M    D ++W +++ A
Sbjct: 431 MPFAPDAIVWRALLGA 446


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/565 (40%), Positives = 358/565 (63%), Gaps = 12/565 (2%)

Query: 280 GKELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           G++LH  AI+ G F SD    + L+ MY  C       + F ++ + + +  T + +GY 
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ---TKEIHGYIIRKGLS- 394
           +NN    +L LFR +   G  A  +   + L+A S    +     T  +H  +++ GL  
Sbjct: 168 RNNLVYPSLALFRKLIASG-SATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDG 226

Query: 395 DLVILNAIVDVYGKCGNIDY--SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
           D  ++N ++D Y K G  D   +R VF+++E KDVVSW SMI+ Y  NG++ +AL L+  
Sbjct: 227 DAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRK 285

Query: 453 M--NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
           M     +++ +++TL + L A +    ++ GK ++  ++R G      V +S+VDMY++C
Sbjct: 286 MLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKC 345

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G +++A K F  ++ K+++ W++MI   G+HG G+ A+D+F +M      P++ITF+++L
Sbjct: 346 GRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVL 405

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            ACSH+GL+++G+ +   M+  + ++P  EHY C+VDLLGRA  L+EAY  ++ M+++P 
Sbjct: 406 AACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPD 465

Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
           A +W ALL ACR+H N EL EI AK+L ELD  N G YVL+SN++A +  WKDVE++R+ 
Sbjct: 466 AAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVL 525

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
           ++  G++K PG S +E+  + H F   DKSH +  EIY  L ++ EK++ E GYV  T  
Sbjct: 526 VKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQ-EAGYVPNTGS 584

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
           VLH+++EEEK   L+ HSE+LAIA+ ++ S  GS+I + KNLRVC DCH+  KL++++  
Sbjct: 585 VLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQ 644

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           RE++VRD  RFHHF+ G CSCGDYW
Sbjct: 645 REIIVRDLQRFHHFKDGSCSCGDYW 669



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 222/439 (50%), Gaps = 11/439 (2%)

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           R LF R  +      W++ +    +SG  + AL  F    RV           A +A   
Sbjct: 42  RALFLRAVDPSRPASWSAAVGDLLSSGDPVAALAAFAAALRVNPAALRPALPPAFRAAAA 101

Query: 173 SSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           ++    G ++H   ++SG      + A+AL+ MY  C +  +A     ++ + + V   +
Sbjct: 102 ATSLAAGRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITA 161

Query: 232 MLTGFVQNDLYCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
           M +G+V+N+L   ++  FR+L   G+    D+   + A SAS R+ +      LHA  +K
Sbjct: 162 MASGYVRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVK 221

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNY-MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
            G   D  + NT++D YAK    +    R  +    +D +SW ++IA YAQN     AL 
Sbjct: 222 TGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTMEKDVVSWNSMIALYAQNGMSADALG 281

Query: 349 LFRT-VQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDV 405
           L+R  + + G +  + + + ++L+AC+    +   K IH  ++R GL + V +  ++VD+
Sbjct: 282 LYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDM 341

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y KCG ++ +R  F+ I+ K+++SW++MI+ Y  +G   EAL++F  M  +    + IT 
Sbjct: 342 YSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITF 401

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCV 523
           +S L+A S   +L KG+      ++K F +E  V     +VD+  R G LD A  +   +
Sbjct: 402 ISVLAACSHAGLLDKGRYWYN-AMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEM 460

Query: 524 QTK-DLILWTSMINANGLH 541
           + K D  +W ++++A  +H
Sbjct: 461 KVKPDAAIWGALLSACRIH 479



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 185/384 (48%), Gaps = 11/384 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG--ISVDA 58
           MY  C   +DA + FD++         AM   YV N      L  + ++   G   +VD 
Sbjct: 134 MYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLIASGSATAVDE 193

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC--YDFRKARQLF 116
                   A A + D    + +H LV+K G D    +VN+++  YAK    D   AR++F
Sbjct: 194 AAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVF 253

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG--LVTNAYTFVAALQACEDSS 174
           D M  ++DVV WNS+I+ Y+ +G   +ALGL+R+M  V   +  NA T  A L AC  + 
Sbjct: 254 DTM--EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAG 311

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  IH   V+ G    VYV  +++ MY++CG++  A     +++ K+ +SW++M+T
Sbjct: 312 TIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMIT 371

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFV 293
           G+  +    +A+  F E+  +GQ P+ +  ++ ++A    G L  G+  +    K+ G  
Sbjct: 372 GYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIE 431

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALELFR 351
             ++    ++D+  +  C++    +  +M  + D   W  +++      N  L  +   R
Sbjct: 432 PGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKR 491

Query: 352 TVQLEGLDADVMIIGSVLMACSGL 375
             +L+  +    ++ S + A +G+
Sbjct: 492 LFELDATNCGYYVLLSNIYAEAGM 515



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 204/421 (48%), Gaps = 10/421 (2%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
           +W+A +G  +S+G+P+  L  ++    +  +      P   +A A    L  G ++H L 
Sbjct: 56  SWSAAVGDLLSSGDPVAALAAFAAALRVNPAALRPALPPAFRAAAAATSLAAGRQLHLLA 115

Query: 85  LKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE 143
           ++ G + S  F  ++L+ MY  C     AR+ FD +     V++  ++ S Y  +     
Sbjct: 116 IRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVII-TAMASGYVRNNLVYP 174

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM--EIHAATVKSGQNLQVYVANAL 201
           +L LFR++   G  T      A +     +     G+   +HA  VK+G +    V N +
Sbjct: 175 SLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTM 234

Query: 202 IAMYARCGKMT-EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE-LQGAGQKP 259
           +  YA+ G+    AA  ++    KD VSWNSM+  + QN +   A+  +R+ L  +G   
Sbjct: 235 LDAYAKGGRRDLGAARKVFDTMEKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIK 294

Query: 260 DQVCTVNAV-SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
               T++A+  A    G +  GK +H   ++ G   ++ +G +++DMY+KC  V    + 
Sbjct: 295 CNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKA 354

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F ++  ++ +SW+ +I GY  +    +AL++F  +   G + + +   SVL ACS    +
Sbjct: 355 FQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLL 414

Query: 379 SQTKEIHGYIIRK-GLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMIS 435
            + +  +  + ++ G+   V     +VD+ G+ G +D +  + + ++ K D   W +++S
Sbjct: 415 DKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLS 474

Query: 436 S 436
           +
Sbjct: 475 A 475


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 221/569 (38%), Positives = 348/569 (61%), Gaps = 3/569 (0%)

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           ++A  R  +L + + +HA+     F   + + N+L+ +Y KC  V    RVF  M A+D 
Sbjct: 71  ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
            SWT++IAGYAQN+   +AL L   +       +     S+L A          ++IH  
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190

Query: 388 IIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            ++    D V + +A++D+Y +CG +D +  VF+ +ESK+ VSW ++I+ +   G     
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L +F  M     E+   T  S  SA + +  L++GK ++  +I+ G  L   V ++++DM
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDM 310

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           YA+ G++  A KVF+ V  KD++ W SM+ A   +G G+ A+  F +M       + ITF
Sbjct: 311 YAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITF 370

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           L++L ACSH GL+ EGK++ ++M+ +Y L+P  +HY  +VDLLGRA  L +A  F+  M 
Sbjct: 371 LSILTACSHGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           ++PTA VW ALLG+CR+H N ++G+  A  + ELDP + G  VL+ N++A++ +W    +
Sbjct: 430 MKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAAR 489

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR  M+ +G+KK P  SW+EI N +H F+A D +H  S+EIYKK  EI+ ++ R+ GYV 
Sbjct: 490 VRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQI-RKAGYVP 548

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
            T +VL +V+E+E+   L  HSE++A+A+ ++    G+ IRI KN+R+C DCHS  + +S
Sbjct: 549 NTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYIS 608

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++F RE+VVRD NRFHHF +G CSCGDYW
Sbjct: 609 KVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 175/332 (52%), Gaps = 12/332 (3%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +I ACA  + LD    IH  +    +  + F+ NSL+ +Y KC     AR++FD M 
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+  W S+I+ Y+ +    EALGL   M R     N +TF + L+A   S+   +G 
Sbjct: 127 AR-DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGE 185

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA TVK   +  VYV +AL+ MYARCG+M  A  V  QLE+K+ VSWN+++ GF +  
Sbjct: 186 QIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKG 245

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                +  F E+Q  G +       +  SA   +G L  GK +HA+ IK G      +GN
Sbjct: 246 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN 305

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           T++DMYAK   +    +VF ++  +D ++W +++  +AQ     +A+  F  ++  G+  
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 365

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           + +   S+L ACS           HG ++++G
Sbjct: 366 NQITFLSILTACS-----------HGGLVKEG 386



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 146/282 (51%), Gaps = 1/282 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG+V DA ++FD +  R + +W +++  Y  N  P   L     M       + FT
Sbjct: 108 LYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFT 167

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++KA         G +IH L +K  +    ++ ++L+ MYA+C     A  +FD++ 
Sbjct: 168 FASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL- 226

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E ++ V WN++I+ ++  G     L +F EMQR G     +T+ +   A         G 
Sbjct: 227 ESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 286

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KSG+ L  +V N ++ MYA+ G M +A  V  +++ KD V+WNSMLT F Q  
Sbjct: 287 WVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYG 346

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           L  +A+  F E++  G   +Q+  ++ ++A    G +  GK+
Sbjct: 347 LGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ 388



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 127/233 (54%), Gaps = 1/233 (0%)

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCG 410
           +V    L A   +  S++ AC+  + +   + IH ++     +  V L N+++ +Y KCG
Sbjct: 54  SVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCG 113

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            +  +R VF+ + ++D+ SWTS+I+ Y  N + +EAL L   M     + +  T  S L 
Sbjct: 114 AVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLK 173

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           AA + +    G++++   ++  ++ +  V S+L+DMYARCG +D+A  VF+ +++K+ + 
Sbjct: 174 AAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVS 233

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           W ++I      G G+  + +F +M+   F   H T+ ++  A +  G + +GK
Sbjct: 234 WNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 286



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 126/245 (51%), Gaps = 24/245 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG +  A  +FD++  +   +WNA++  +   G+    L  ++ M+  G     FT
Sbjct: 209 MYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFT 268

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V  A A +  L+ G  +H  ++K G   + F+ N+++ MYAK      AR++FDR+ 
Sbjct: 269 YSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRV- 327

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K+DVV WNS+++A++  G   EA+  F EM++ G+  N  TF++ L AC          
Sbjct: 328 DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS--------- 378

Query: 181 EIHAATVKSGQ---------NLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENKDSVS- 228
             H   VK G+         NL+  + +   ++ +  R G + +A   ++++  K + + 
Sbjct: 379 --HGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAV 436

Query: 229 WNSML 233
           W ++L
Sbjct: 437 WGALL 441


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/643 (35%), Positives = 375/643 (58%), Gaps = 4/643 (0%)

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           ++ N LI +Y +C +  +A  V + +++K+  SW  ML  F +N  + +   FFR +   
Sbjct: 11  FLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQ 70

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           G  P +V     +SA      +  G+ +    +  G   +  +   L+ +Y K       
Sbjct: 71  GINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDA 130

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
             VF +M+ +D ++W+ ++A YA+N    +AL LFR + L+G+  + + + S L AC+ L
Sbjct: 131 ASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASL 190

Query: 376 KCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
             +     +H  +  +G+ S +V+  A+V++YGKCG I+ +   F  I  K+VV+W+++ 
Sbjct: 191 GDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAIS 250

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           ++Y  N    +A+ + + M+   +  +S T VS L A ++++ LK+G+ ++  I   G  
Sbjct: 251 AAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGG 310

Query: 495 LEGSV--ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           LE  V   ++LV+MY++CG L +A  +F+ +   DL+LW S+I  N  HG+ + A++LF 
Sbjct: 311 LESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFE 370

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           +M  E   P  ITF ++L+ACSH+G++++G+K       D+ + P  EH+ C+VDLLGRA
Sbjct: 371 RMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRA 430

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
             + ++   +  M  EP    W A LGACR + N +     A+ L +LDP     YVL+S
Sbjct: 431 GWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLS 490

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           N++A + +W DV ++R  M+     K  G SWIE+ +++H FI+ D  H    EI+ +L 
Sbjct: 491 NMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQ 550

Query: 733 EITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNL 792
            +T KL +  GYV  T+ VLH+V++E K  M+  HSE+LA+A+ +L + EGS IR+ KNL
Sbjct: 551 RLT-KLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNL 609

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           RVC DCH+  K +S+L  RE+VVRD NRFH F+ G CSCGDYW
Sbjct: 610 RVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 211/441 (47%), Gaps = 6/441 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC    DA  +F  +  + VF+W  ML A+  N +  R    +  M + GI+     
Sbjct: 19  LYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPGEVG 78

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + AC   +++  G  I   +L  G +    +  +LV++Y K      A  +F RM 
Sbjct: 79  ISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMS 138

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV W+++++AY+ +G   EALGLFR+M   G+  N  T V+ L AC        G 
Sbjct: 139 HR-DVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGA 197

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H      G    V V  AL+ +Y +CG++  AA    Q+  K+ V+W+++   + +ND
Sbjct: 198 LMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARND 257

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA--YAIKQGFVSDLQI 298
               A++    +   G  P+    V+ + A   +  L  G+ +H   + +  G  SD+ +
Sbjct: 258 RNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYV 317

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
              L++MY+KC  +   G +F ++   D + W ++IA  AQ+    KALELF  ++LEGL
Sbjct: 318 LTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGL 377

Query: 359 DADVMIIGSVLMACSGLKCMSQ-TKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
              ++   SVL ACS    + Q  K    +I   G+  +      +VD+ G+ G I  S 
Sbjct: 378 QPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSE 437

Query: 417 NVFESIE-SKDVVSWTSMISS 436
           ++   +      V+W + + +
Sbjct: 438 DLLLHMPFEPHPVAWMAFLGA 458


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/596 (37%), Positives = 352/596 (59%), Gaps = 37/596 (6%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLM----DMYAKCCCVNYMGRVFYQMTAQDFISWT 331
           +L + K +HAY I+   + D+   + L+    D  +    ++Y  R+F Q+   +   + 
Sbjct: 29  DLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFN 88

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
            +I G++ +    +A   +   Q +GL  D +    ++ +C+ L C+S   + HG+II+ 
Sbjct: 89  AMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKH 148

Query: 392 GL-SDLVILNAIVDVYG-------------------------------KCGNIDYSRNVF 419
           G   D+ + N++V +Y                                KCG+++ +R +F
Sbjct: 149 GFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLF 208

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +  K++V+W++MIS Y  N   ++A+ELF ++    V ++   +VS +S+ + L  L+
Sbjct: 209 DQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALE 268

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G+  + ++++ G  L   + ++LVDMYARCG++D A  VF  +  +D + WT++I    
Sbjct: 269 LGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLA 328

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HG  + ++  F  M      P  ITF A+L ACSH GL+  G +  E M+ D++++P  
Sbjct: 329 MHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRL 388

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C+VDLLGRA  LEEA +FV  M ++P A VW ALLGACR+H N E+GE V K L++
Sbjct: 389 EHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQ 448

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L P + G YVL+SN++A +++W+ V ++R  M+  GLKK PG S IE+  ++H F   D 
Sbjct: 449 LLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDS 508

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
           SH E D+I +   EI  ++ R  GY   T   L +++EEEK   L+ HSE+LAIA+G+++
Sbjct: 509 SHPEMDKIERMWEEILMRI-RAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMR 567

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S  G+ IRI KNLRVC DCH+  KL+S++FGREL+VRD NRFHHF  G+CSC DYW
Sbjct: 568 SEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 169/354 (47%), Gaps = 41/354 (11%)

Query: 7   SVLD-AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           S++D A ++F ++    +F +NAM+  +  +  P +    Y + +  G+  D  TFP ++
Sbjct: 67  SLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLV 126

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA--------------------- 104
           K+C  L  +  G++ HG ++K G++   ++ NSLV MYA                     
Sbjct: 127 KSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVV 186

Query: 105 ----------KCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV 154
                     KC D   AR+LFD+M EK ++V W+++IS Y+ +    +A+ LF+ +Q  
Sbjct: 187 SWTSMIRGFNKCGDVESARKLFDQMPEK-NLVTWSTMISGYAQNNHFDKAVELFKVLQSQ 245

Query: 155 GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEA 214
           G+  N    V+ + +C       LG   H   VK+G  L + +  AL+ MYARCG + +A
Sbjct: 246 GVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKA 305

Query: 215 AGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
             V   L  +D++SW +++ G   +    +++++F  +  AG  P  +     +SA    
Sbjct: 306 VWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHG 365

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           G +  G     + I +    D ++   L + Y   C V+ +GR      A+ F+
Sbjct: 366 GLVERG-----FQIFESMKRDHRVEPRL-EHYG--CMVDLLGRAGKLEEAERFV 411



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 187/417 (44%), Gaps = 56/417 (13%)

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG---- 120
           ++ C+ L  L     IH  +++       F  + L+A    C D      L D       
Sbjct: 24  LETCSDLTHLKI---IHAYMIRTHIICDVFAASRLIAF---CVDPSSGTSLIDYASRIFS 77

Query: 121 --EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
             +  ++ ++N++I  +S S    +A   + + QR GL+ +  TF   +++C      ++
Sbjct: 78  QIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISM 137

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYA-------------------------------R 207
           G + H   +K G    VYV N+L+ MYA                               +
Sbjct: 138 GSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNK 197

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
           CG +  A  +  Q+  K+ V+W++M++G+ QN+ + KA++ F+ LQ  G + ++   V+ 
Sbjct: 198 CGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSV 257

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           +S+   LG L  G+  H Y +K G   +L +G  L+DMYA+C  ++    VF  +  +D 
Sbjct: 258 ISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDT 317

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQ 380
           +SWT +IAG A +    ++L+ F T+   GL    +   +VL ACS       G +    
Sbjct: 318 LSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFES 377

Query: 381 TKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYS-RNVFESIESKDVVSWTSMISS 436
            K  H    R     L     +VD+ G+ G ++ + R V +     +   W +++ +
Sbjct: 378 MKRDHRVEPR-----LEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGA 429



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 7/236 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           + KCG V  A +LFD++ ++ + TW+ M+  Y  N    + +E +  ++  G+  +    
Sbjct: 195 FNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVM 254

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             VI +CA L  L+ G + H  V+K G      +  +LV MYA+C    KA  +F+ + E
Sbjct: 255 VSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPE 314

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D + W ++I+  +  G    +L  F  M   GL     TF A L AC        G +
Sbjct: 315 R-DTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQ 373

Query: 182 IHAATVKSGQ---NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
           I  +  +  +    L+ Y    ++ +  R GK+ EA   + ++  K +   W ++L
Sbjct: 374 IFESMKRDHRVEPRLEHY--GCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALL 427



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 8/196 (4%)

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAI----VDVYGKCGNIDYSRNVFESIE 423
           L  CS L   +  K IH Y+IR  +  D+   + +    VD       IDY+  +F  I+
Sbjct: 24  LETCSDL---THLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ 80

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
           + ++  + +MI  +  +   ++A   +       +  D++T    + + + L  +  G +
Sbjct: 81  NPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQ 140

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
            +G II+ GF  +  V +SLV MYA  G  + A  +F  +   D++ WTSMI      G 
Sbjct: 141 AHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGD 200

Query: 544 GKVAIDLFYKMEAESF 559
            + A  LF +M  ++ 
Sbjct: 201 VESARKLFDQMPEKNL 216



 Score = 47.0 bits (110), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 23/146 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGS+  A  +F+ + +R   +W A++     +G   R L+ ++ M   G++    T
Sbjct: 295 MYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDIT 354

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYD-----STDFIVNS-------LVAMYAKCYD 108
           F  V+ AC+           HG +++ G+        D  V         +V +  +   
Sbjct: 355 FTAVLSACS-----------HGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGK 403

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISA 134
             +A +   +M  K +  +W +++ A
Sbjct: 404 LEEAERFVLKMPVKPNAPVWGALLGA 429


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/618 (37%), Positives = 379/618 (61%), Gaps = 4/618 (0%)

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +  +++VSW ++++G  QN ++  A+  F  ++ AG  P +    +A  A+  LG  L G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
            +LH   ++ GF ++L + + L DMY+KC  ++   RVF QM  +D ++WT +I GYA+N
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 341 NCHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
                A+  FR ++ EGL  AD  +  SVL A  GLK    +K IH  + + G   ++ +
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180

Query: 399 LNAIVDVYGKCGNIDYSRNVFE-SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
            NA++D+Y K  +++ +  V +      +VVS TSMI  Y+      EAL ++  +    
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 240

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           VE +  T  S +   +  ++L++G +L+  +I+     +  V S+LVDMY +CG + ++ 
Sbjct: 241 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 300

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           ++FN ++ +  I W ++IN    HG G+ AI  F +M      P+HI F++LL ACSH+G
Sbjct: 301 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAG 360

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L++EG K+   M+  + ++P  EHY+C++D  GRA  L+EAY+F+  M I+P A  WC+L
Sbjct: 361 LVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 420

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           LGACR+  +KELGE+ A+ L++L+PGN G +V +S ++A+  +W+DV+ VR  MR S +K
Sbjct: 421 LGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIK 480

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K PG SW++   K H F + D SH +  +IY+KL E+T +++ E GY+  T F+  N+E+
Sbjct: 481 KLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEE-GYIPDTSFLPCNLED 539

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
             K ++L  HSER+A+A+ ++       I + KNLR+C+DCH+  K + ++  R+++VRD
Sbjct: 540 IAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRD 599

Query: 818 ANRFHHFEAGVCSCGDYW 835
            +RFHHF  G CSCGDYW
Sbjct: 600 NSRFHHFVNGRCSCGDYW 617



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 222/443 (50%), Gaps = 8/443 (1%)

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + + V W +++S  S +    +AL  F  M+R G+    +   +A +A         G +
Sbjct: 3   RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQ 62

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   V+ G + +++VA+ L  MY++CG ++EA  V  Q+  KD+V+W +M+ G+ +N  
Sbjct: 63  LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 122

Query: 242 YCKAMQFFRELQGAG-QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              A+  FR+++  G    DQ    + +SASG L +    K +H    K GF  ++ + N
Sbjct: 123 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 182

Query: 301 TLMDMYAKCCCVNYMGRVF-YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            L+DMYAK   V    RV        + +S T++I GY + +C  +AL ++  ++ +G++
Sbjct: 183 ALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVE 242

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            +     S++  C+    + Q  ++H  +I+  L  D  + + +VD+YGKCG I  S  +
Sbjct: 243 PNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQL 302

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  IE +  ++W ++I+ +  +G   EA++ F  M  + +  + I  VS L+A S   ++
Sbjct: 303 FNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLV 362

Query: 479 KKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
            +G K         G   +    S ++D Y R G LD A K  + +  K +   W S++ 
Sbjct: 363 DEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLG 422

Query: 537 ANGLHGR---GKVAIDLFYKMEA 556
           A  + G    G+VA     K+E 
Sbjct: 423 ACRMRGSKELGEVAAQNLMKLEP 445



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 210/433 (48%), Gaps = 24/433 (5%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCG 77
           + +R   +W  ++     N      L  ++ MR  G++   F      +A A L     G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           A++H + ++ G+D+  F+ ++L  MY+KC    +A ++FD+M +K D V W ++I  Y+ 
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQK-DAVAWTAMIDGYAK 119

Query: 138 SGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
           +G    A+  FR+M+R GLV  + + F + L A        L   IH    K+G  L+V 
Sbjct: 120 NGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 179

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWN-----SMLTGFVQNDLYCKAMQFFRE 251
           V NALI MYA+   +  A+ VL      D   WN     SM+ G+++ D   +A+  + E
Sbjct: 180 VRNALIDMYAKSMDVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVE 235

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           L+  G +P++    + +        L  G +LHA  IK   + D  +G+TL+DMY KC  
Sbjct: 236 LRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGL 295

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           ++   ++F ++  +  I+W  +I  +AQ+    +A++ F  +   G+  + +   S+L A
Sbjct: 296 ISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTA 355

Query: 372 CS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIES 424
           CS       GLK     KE HG   ++        + I+D YG+ G +D +      +  
Sbjct: 356 CSHAGLVDEGLKYFYSMKEAHGIEPKEEH-----YSCIIDTYGRAGRLDEAYKFISEMPI 410

Query: 425 K-DVVSWTSMISS 436
           K +   W S++ +
Sbjct: 411 KPNAYGWCSLLGA 423



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 158/341 (46%), Gaps = 23/341 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           MY KCG + +A ++FD++ Q+    W AM+  Y  NG     + ++  M+  G +  D  
Sbjct: 85  MYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQH 144

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
            F  V+ A   LKD      IH  V K G++    + N+L+ MYAK  D   A ++    
Sbjct: 145 VFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKID 204

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               +VV   S+I  Y  +    EAL ++ E++R G+  N +TF + ++ C   +    G
Sbjct: 205 PGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQG 264

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++HA  +K+      +V + L+ MY +CG ++ +  +  ++E +  ++WN+++  F Q+
Sbjct: 265 AQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQH 324

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-------KELHAYAIKQGF 292
               +A+Q F  +  +G +P+ +  V+ ++A    G +  G       KE H    K+  
Sbjct: 325 GHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEH 384

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
            S               C ++  GR      A  FIS   I
Sbjct: 385 YS---------------CIIDTYGRAGRLDEAYKFISEMPI 410



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 35/217 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG +  + QLF+++  RT   WNA++  +  +G     ++ + RM   GI  +   
Sbjct: 289 MYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIA 348

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ AC+    +D G K                           Y  ++A  +     
Sbjct: 349 FVSLLTACSHAGLVDEGLKYF-------------------------YSMKEAHGI----E 379

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            KE+   ++ II  Y  +G+  EA     EM    +  NAY + + L AC     + LG 
Sbjct: 380 PKEE--HYSCIIDTYGRAGRLDEAYKFISEMP---IKPNAYGWCSLLGACRMRGSKELG- 433

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           E+ A  +   +     +  +L  +YA  G+  +   V
Sbjct: 434 EVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAV 470


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/571 (39%), Positives = 350/571 (61%), Gaps = 4/571 (0%)

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD-LQIGNTLMDMYAKCCCVNYMGR 317
           PD       +    RLG +  G+ +HA+ +   F+ + L + N +++MYAKC C++   R
Sbjct: 85  PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           +F +M  +D ++WT +IAG++QNN    AL LF  +   G   +   + S+L A      
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG 204

Query: 378 MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           +    ++H + ++ G  S + + +A+VD+Y +CG++D ++  F+ + +K  VSW ++IS 
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           +   G    AL L + M   N +    T  S LSA +S+  L++GK ++  +I+ G  L 
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLI 324

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             + ++L+DMYA+ G++D A +VF+ +   D++ W +M+     HG GK  +D F +M  
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
               P+ I+FL +L ACSHSGL++EG  + E+M+  Y+++P   HY   VDLLGR   L+
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLD 443

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
            A +F+R M IEPTA VW ALLGACR+H N ELG   A++  ELDP + G  +L+SN++A
Sbjct: 444 RAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYA 503

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           ++ +W+DV +VR  M+ SG+KK P  SW+EI N +H F+A D++H    EI  K  EI+ 
Sbjct: 504 SAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISG 563

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           K+ +E GYV  T  VL  V+++E+ + L  HSE+LA+A+ +L +  GS IRI KN+RVC 
Sbjct: 564 KI-KEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCG 622

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
           DCH+  K VS++  RE++VRD NRFH F  G
Sbjct: 623 DCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 222/447 (49%), Gaps = 15/447 (3%)

Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG-QNLQ 194
           S  G  L AL L   +QR  LV +   +   L+ C        G  +HA  V S   +  
Sbjct: 66  SDGGTGLYALDL---IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNH 122

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           + + N ++ MYA+CG + +A  +  ++  KD V+W +++ GF QN+    A+  F ++  
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G +P+     + + ASG    L  G +LHA+ +K G+ S + +G+ L+DMYA+C  ++ 
Sbjct: 183 LGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDA 242

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
               F  M  +  +SW  +I+G+A+      AL L   +Q +          SVL AC+ 
Sbjct: 243 AQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACAS 302

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +  + Q K +H ++I+ GL  +  + N ++D+Y K G+ID ++ VF+ +   DVVSW +M
Sbjct: 303 IGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTM 362

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           ++    +GL  E L+ F  M    +E + I+ +  L+A S   +L +G  L  F + K +
Sbjct: 363 LTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEG--LYYFELMKKY 420

Query: 494 NLEGSVAS--SLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMINANGLHGR---GKVA 547
            +E  V    + VD+  R G LD A +    +  +    +W +++ A  +H     G  A
Sbjct: 421 KVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYA 480

Query: 548 IDLFYKMEAESFAPDHITFLALLYACS 574
            +  ++++     P     L+ +YA +
Sbjct: 481 AERAFELDPHDSGPR--MLLSNIYASA 505



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 187/380 (49%), Gaps = 11/380 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + DA ++FD++  + + TW A++  +  N  P   L  + +M  LG   + FT
Sbjct: 132 MYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFT 191

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++KA      LD G ++H   LK GY S+ ++ ++LV MYA+C     A+  FD M 
Sbjct: 192 LSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP 251

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +V  WN++IS ++  G+   AL L  +MQR       +T+ + L AC        G 
Sbjct: 252 TKSEVS-WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGK 310

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KSG  L  ++ N L+ MYA+ G + +A  V  +L   D VSWN+MLTG  Q+ 
Sbjct: 311 WVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHG 370

Query: 241 LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKEL-HAYAIKQGFVSDL 296
           L  + +  F ++   G +P+++   C + A S SG L   L   EL   Y ++     D+
Sbjct: 371 LGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVE----PDV 426

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTII-AGYAQNNCHLKALELFRTVQ 354
               T +D+  +   ++   R   +M  +   + W  ++ A     N  L      R  +
Sbjct: 427 PHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFE 486

Query: 355 LEGLDADVMIIGSVLMACSG 374
           L+  D+   ++ S + A +G
Sbjct: 487 LDPHDSGPRMLLSNIYASAG 506



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 179/355 (50%), Gaps = 9/355 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGY-DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           ++K C  L  ++ G  +H  ++   + D+   + N +V MYAKC     AR++FD M  K
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D+V W ++I+ +S + +  +AL LF +M R+G   N +T  + L+A         G ++
Sbjct: 153 -DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQL 211

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA  +K G    VYV +AL+ MYARCG M  A      +  K  VSWN++++G  +    
Sbjct: 212 HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEG 271

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
             A+    ++Q    +P      + +SA   +G L  GK +HA+ IK G      IGNTL
Sbjct: 272 EHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTL 331

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMYAK   ++   RVF ++   D +SW T++ G AQ+    + L+ F  +   G++ + 
Sbjct: 332 LDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNE 391

Query: 363 MIIGSVLMACSGLKCMSQT----KEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           +    VL ACS    + +     + +  Y +   +   V     VD+ G+ G +D
Sbjct: 392 ISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYV---TFVDLLGRVGLLD 443


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/749 (31%), Positives = 408/749 (54%), Gaps = 3/749 (0%)

Query: 11  AEQLFDKVSQR-TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           A+ +F+ +     V +WN+++  Y+ NG+  + +  + +MR LG+  D  T    +K C+
Sbjct: 109 AQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICS 168

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
           +L+D   G +IHG+ ++ G+D      ++LV MYAKC     +  +F  + +K + + W+
Sbjct: 169 LLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDK-NWISWS 227

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           + I+    + Q L  L LF+EMQR G+  +  T+ +  ++C   S   LG ++H   +K+
Sbjct: 228 AAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKT 287

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
                V V  A + MYA+C  M++A  +   L + +  S+N+M+ G+ +N+   +A + F
Sbjct: 288 DFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLF 347

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            +LQ      D+V    A+SA+  +     G +LH  AIK    S++ + N ++DMY KC
Sbjct: 348 LQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKC 407

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             +     +F +M  +D +SW  II    QN    K L  F  +    ++ D    GSVL
Sbjct: 408 GALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVL 467

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            AC+G +  S   E+HG II+ G+   + + +A+VD+Y KCG ++ +  +   +E + +V
Sbjct: 468 KACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMV 527

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           SW ++IS +     + ++   F  M E  VE D+ T  + L   ++L+ +  GK+++  +
Sbjct: 528 SWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQM 587

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           I+     +  + S+LVDMY++CG +  +  +F     +D + W +MI     HG G+ A+
Sbjct: 588 IKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEAL 647

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
           +LF  M  E+  P+H TF+++L ACSH G   +G  + + M   Y L+P  EHY+C+VD+
Sbjct: 648 ELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDI 707

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
           LGR+  +EEA + ++ M  E  A +W  LL  C++  N E+ E  A  LL+LDP +   Y
Sbjct: 708 LGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAY 767

Query: 669 VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
            L+SN++A +  W+ V ++R  MR   LKK PG SWIE+ +++H+F+  DK+H + + IY
Sbjct: 768 TLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIY 827

Query: 729 KKLAEITEKLEREGGYVAQTQFVLHNVEE 757
             L  +   + R G         +  VEE
Sbjct: 828 SLLDLLICDMRRSGCAPEIDTIQVEEVEE 856



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 162/598 (27%), Positives = 300/598 (50%), Gaps = 37/598 (6%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  + + C+  + L  G + H  ++  G+  T F+ N L+ MY KC     A ++F+ M
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 120 GEKE-------------------------------DVVLWNSIISAYSASGQCLEALGLF 148
            +++                               DVV WNS+IS Y  +G   +++ +F
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            +M+ +G++ +  T   +L+ C     + LG++IH   V+ G +  V   +AL+ MYA+C
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
             + ++  V  +L +K+ +SW++ + G VQND   + ++ F+E+Q  G    Q    +  
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            +   L     G +LH +A+K  F SD+ +G   +DMYAKC  ++   ++F  +   +  
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           S+  +I GYA+N    +A +LF  +Q      D + +   L A + +K  S+  ++HG  
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLA 385

Query: 389 IRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           I+  L S++ + NAI+D+YGKCG +  +  +F+ +E +D VSW ++I++   N    + L
Sbjct: 386 IKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTL 445

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
             F  M  + +E D  T  S L A +       G E++G II+ G  L+  V S+LVDMY
Sbjct: 446 SHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMY 505

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           ++CG ++ A K+   ++ + ++ W ++I+   L  + + +   F  M      PD+ T+ 
Sbjct: 506 SKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYA 565

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY--ACLVDLLGRANHLEEAYQFVR 623
            +L  C++   +  GK+    M    +L+   + Y  + LVD+  +  ++ ++    R
Sbjct: 566 TVLDTCANLATVGLGKQIHAQM---IKLELLSDVYITSTLVDMYSKCGNMHDSLLMFR 620



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 171/600 (28%), Positives = 306/600 (51%), Gaps = 19/600 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC S+ D+  +F ++  +   +W+A +   V N + LR L+ +  M+  GI V   T
Sbjct: 201 MYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQST 260

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V ++CA L     G ++H   LK  + S   +  + + MYAKC +   A +LF  + 
Sbjct: 261 YASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLP 320

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  ++  +N++I  Y+ + Q  +A  LF ++Q+     +  +   AL A       + G+
Sbjct: 321 D-HNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGL 379

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +KS  +  + VANA++ MY +CG + EA+G+  ++E +D VSWN+++T   QN+
Sbjct: 380 QLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNE 439

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              K +  F  +  +  +PD+    + + A        NG E+H   IK G    + +G+
Sbjct: 440 SEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGS 499

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  +    ++ Y++  Q  +SW  II+G++       +   F  +   G++ 
Sbjct: 500 ALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEP 559

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     +VL  C+ L  +   K+IH  +I+ + LSD+ I + +VD+Y KCGN+  S  +F
Sbjct: 560 DNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMF 619

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
                +D V+W +MI  + ++GL  EALELF  M   N++ +  T VS L A S +   K
Sbjct: 620 RKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAK 679

Query: 480 KGKELNGFIIRKG---FNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
           KG     F  +K    + LE  +   S +VD+  R G ++ A ++   +  + D I+W +
Sbjct: 680 KGL----FYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRT 735

Query: 534 MINANGLHGRGKV---AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           +++   + G  +V   A     K++ E  +    T L+ +YA   +G+  +  K  + MR
Sbjct: 736 LLSICKIQGNVEVAEKAASSLLKLDPEDSSA--YTLLSNIYA--DAGMWQQVSKIRQTMR 791



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 255/539 (47%), Gaps = 39/539 (7%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           TF    Q C +      G E HA  + SG    V+V N LI MY +C  +  A  V  ++
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 222 ENKDSVSWNSM--------------------------------LTGFVQNDLYCKAMQFF 249
             +D VSWN+M                                ++G++QN    K++  F
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            +++  G   D      ++     L + + G ++H  A++ GF  D+  G+ L+DMYAKC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             +     VF ++  +++ISW+  IAG  QN+  L+ L+LF+ +Q +G+        SV 
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            +C+GL       ++H + ++    SD+++  A +D+Y KC N+  +  +F  +   ++ 
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           S+ +MI  Y  N    +A +LF  + + +   D ++L  ALSAA+ +    +G +L+G  
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLA 385

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           I+   +    VA++++DMY +CGAL  A+ +F+ ++ +D + W ++I A   +      +
Sbjct: 386 IKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTL 445

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVD 607
             F  M      PD  T+ ++L AC+     + G +    I++    L  +    + LVD
Sbjct: 446 SHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVG--SALVD 503

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL--DPGN 664
           +  +   +EEA +    ++ E T   W A++    +    E  +     +LE+  +P N
Sbjct: 504 MYSKCGMMEEAEKIHYRLE-EQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDN 561


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/725 (34%), Positives = 405/725 (55%), Gaps = 10/725 (1%)

Query: 14  LFDKVSQ--RTVFTWNAMLGAY-VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           LF++  Q  RT F WN ++ A+ ++        ETY+RM   G+ +D  TFP V+K C+ 
Sbjct: 112 LFNQTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSD 171

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
             D+  G ++HG+V K G+D+  ++ N+L+ +Y  C     AR+LFD M E+ DVV WN+
Sbjct: 172 SFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPER-DVVSWNT 230

Query: 131 IISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           II   S +G   EA   +  M  R  +  N  + ++ L        E +   IH  +VK 
Sbjct: 231 IIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKV 290

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G + QV   NAL+  Y +CG +     V  +   K+ VSWNS++ G         A+  F
Sbjct: 291 GLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAF 350

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           R +  AG +P+ V   + +     L     GKE+H ++++ G  +D+ I N+L+DMYAK 
Sbjct: 351 RMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKS 410

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
                   +F+ +  ++ +SW  +IA YA N   L+A+     +Q  G   + +   +VL
Sbjct: 411 GHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVL 470

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            AC+ L  +   KEIH   +R GL SDL + N+++D+Y KCG +  +RNVF +   KD V
Sbjct: 471 PACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEV 529

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           S+  +I  Y       ++L LF  M     + D ++ V  +SA ++L+ LK+GKE++G  
Sbjct: 530 SYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVA 589

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           +R        V++SL+D Y +CG +DIA ++FN +  KD+  W +MI   G+ G  + AI
Sbjct: 590 LRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAI 649

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
            +F  M  ++   D ++++A+L ACSH GL+  G ++   M    +L+P   HY C+VDL
Sbjct: 650 SMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ-RLEPTEMHYTCMVDL 708

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
           LGRA  +EEA + ++ + I P A +W ALLGACR++ N ELG   A+ L EL P + G Y
Sbjct: 709 LGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYY 768

Query: 669 VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
           +L+SN++A + +W +  ++R  M+  G KK PG SW++I +++H+F+A ++   E  E+ 
Sbjct: 769 ILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEER--VEGFELG 826

Query: 729 KKLAE 733
             LAE
Sbjct: 827 DWLAE 831



 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 187/597 (31%), Positives = 317/597 (53%), Gaps = 14/597 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           +YG CG + DA +LFD++ +R V +WN ++G    NG+       Y  M +   I  +  
Sbjct: 203 LYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLV 262

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +   ++   A L+D +   +IH   +K G DS     N+LV  Y KC   +   Q+F+  
Sbjct: 263 SVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNET 322

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK +V  WNSII+  +  G+C +AL  FR M   G   N+ T  + L    +      G
Sbjct: 323 VEKNEVS-WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAG 381

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            EIH  +++ G    +++AN+LI MYA+ G  TEA+ + + L+ ++ VSWN+M+  +  N
Sbjct: 382 KEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALN 441

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L  +A++F  ++Q  G+ P+ V   N + A  RLG L  GKE+HA  ++ G  SDL + 
Sbjct: 442 RLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVS 501

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+DMYAKC C++    VF   + +D +S+  +I GY++ +  L++L LF  ++L G  
Sbjct: 502 NSLIDMYAKCGCLHSARNVF-NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKK 560

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            DV+    V+ AC+ L  + Q KE+HG  +R  L S L + N+++D Y KCG ID +  +
Sbjct: 561 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRL 620

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  I  KDV SW +MI  Y   G    A+ +F  M +  V+ D ++ ++ LSA S   ++
Sbjct: 621 FNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLV 680

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINA 537
           ++G +    ++ +         + +VD+  R G ++ A K+   +    D  +W +++ A
Sbjct: 681 ERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGA 740

Query: 538 NGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYAC-SHSGLINEGKKFLEIMR 590
             ++G    G+ A +  ++++     P H  +  LL    + +G  +E  K  E+M+
Sbjct: 741 CRIYGNVELGRRAAEHLFELK-----PQHCGYYILLSNIYAETGRWDEANKIRELMK 792



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 173/361 (47%), Gaps = 9/361 (2%)

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVS-DLQIGNTLMDMYAKCCCVNYMGRVFYQ-- 321
           +N ++   ++ +LL  K++HA  I  GF+   + +  +L+  YAK         +F Q  
Sbjct: 58  INLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTF 117

Query: 322 MTAQDFISWTTIIAGYAQN-NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
              +    W T+I  ++   N      E +  +   G+  D      VL  CS    + +
Sbjct: 118 QNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICK 177

Query: 381 TKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
             E+HG + + G  +D+ + N ++ +YG CG ++ +R +F+ +  +DVVSW ++I     
Sbjct: 178 GMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSV 237

Query: 440 NGLANEALE-LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
           NG   EA    F+++  + ++ + ++++S L  +++L   +  + ++ + ++ G + + +
Sbjct: 238 NGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVT 297

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
             ++LVD Y +CG++    +VFN    K+ + W S+IN     GR   A++ F  M    
Sbjct: 298 TCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAG 357

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEE 617
             P+ +T  ++L           GK+     MR   + D +  +   L+D+  ++ H  E
Sbjct: 358 AQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIAN--SLIDMYAKSGHSTE 415

Query: 618 A 618
           A
Sbjct: 416 A 416


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 228/562 (40%), Positives = 341/562 (60%), Gaps = 3/562 (0%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +L  G++LH   +  G   D  +   L+D+YA C  V +  R+F  M  ++   W  +I 
Sbjct: 77  SLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIR 136

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
            YA++  H  A++L+R +   G++ D       L AC+ L  +   +E+H  ++      
Sbjct: 137 AYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGE 196

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           D+ +   +VD+Y KCG +D +R VF+ I  +D V W SMI++Y  NG   EAL L   M 
Sbjct: 197 DMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMA 256

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              V     TLVS +SAA+  + L +G+EL+GF  R+GF+ +  + +SLVDMYA+ G + 
Sbjct: 257 ANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQ 316

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYAC 573
           +A  +F  +  ++L+ W +MI   G+HG    A+ LF KM  E+   PD+ITF+ +L AC
Sbjct: 317 VARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSAC 376

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           +H G++ E K+F  +M   Y + P  +H+ CLVD+LG A   EEAY  ++ M ++P + +
Sbjct: 377 NHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGI 436

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
           W ALL  C++H N ELGE+  +KL+EL+P + GNYVL+SN++A S KW+   +VR  M  
Sbjct: 437 WGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTN 496

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            GLKK  G SWIE+  K H F+  D SH  S EIY++L E  E L  + GY+  T  V H
Sbjct: 497 RGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEEL-ERLEGLMSDAGYMPDTMPVFH 555

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +V ++EK  M+  HSERLAIA+G++ +  G+ + +TKNLRVC DCH   KL+S++  RE+
Sbjct: 556 DVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQIVQREI 615

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           ++RD NR+HHF  G CSC DYW
Sbjct: 616 IIRDVNRYHHFVNGECSCKDYW 637



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 205/421 (48%), Gaps = 12/421 (2%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+++C   + L  G ++HG +L  G      +   LV +YA C     AR+LFD M 
Sbjct: 65  YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGM- 123

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +V LWN +I AY+  G    A+ L+R M   G+  + +T+  AL+AC        G 
Sbjct: 124 PKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGR 183

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   + +     ++V   L+ MYA+CG + +A  V  ++  +DSV WNSM+  + QN 
Sbjct: 184 EVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNG 243

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+   R++   G  P     V+ +SA+     L  G+ELH +  ++GF    ++  
Sbjct: 244 RPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKT 303

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LD 359
           +L+DMYAK   V     +F Q+  ++ +SW  +I GY  +    +AL+LF  +++E  + 
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVT 363

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHG-----YIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            D +    VL AC+    + + KE  G     Y I+  +     L   VDV G  G  + 
Sbjct: 364 PDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCL---VDVLGHAGRFEE 420

Query: 415 SRNVFESIE-SKDVVSWTSMISS-YVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + ++ + +    D   W ++++   +H  +    L L  L+     ++ +  L+S + A 
Sbjct: 421 AYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQ 480

Query: 473 S 473
           S
Sbjct: 481 S 481



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 189/386 (48%), Gaps = 21/386 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CG V  A +LFD + +R VF WN ++ AY  +G     ++ Y  M   G+  D FT
Sbjct: 106 LYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFT 165

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P  +KACA L DL+ G ++H  VL   +    F+   LV MYAKC     AR +FDR+ 
Sbjct: 166 YPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRI- 224

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V+WNS+I+AY  +G+ +EAL L R+M   G+     T V+ + A  D++    G 
Sbjct: 225 RVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGR 284

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H    + G + Q  +  +L+ MYA+ G +  A  +  QL  ++ VSWN+M+ G+  + 
Sbjct: 285 ELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHG 344

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            + +A++ F +++   Q  PD +  V  +SA    G +   KE        G + D+   
Sbjct: 345 HFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFF------GLMVDVYSI 398

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAG-YAQNNCHLKALE 348
              +  +   C V+ +G       A D I           W  ++ G     N  L  L 
Sbjct: 399 KPTVQHFT--CLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELA 456

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSG 374
           L + ++LE  DA   ++ S + A SG
Sbjct: 457 LQKLIELEPEDAGNYVLLSNIYAQSG 482



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 8/178 (4%)

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
            S L +  +   L  G++L+G ++  G   +  +A+ LVD+YA CG +  A ++F+ +  
Sbjct: 66  TSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPK 125

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           +++ LW  +I A    G  +VAI L+  M      PD+ T+   L AC+    +  G++ 
Sbjct: 126 RNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREV 185

Query: 586 LEIMRCDYQLDPWPEHY---ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            E +   +    W E     A LVD+  +   +++A      +++  +  VW +++ A
Sbjct: 186 HERVLGTH----WGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSV-VWNSMIAA 238


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/751 (31%), Positives = 412/751 (54%), Gaps = 7/751 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGISVDA 58
           Y K G V DA +LFD++  + + +W + +  +  +G   + + +   + R    G + + 
Sbjct: 56  YSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASG-GEAPNE 114

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           F     ++ACA  + +  G ++HG+ ++ G D   ++  +L+ +YAK      A  +FD 
Sbjct: 115 FLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDA 174

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           +  K  V  W ++I+ YS  GQ   AL LF +M   G+  + +   +A+ AC    F   
Sbjct: 175 LPVKNPVT-WTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEG 233

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G + H    +        V NALI +Y +C +++ A  +   +EN++ VSW +M+ G++Q
Sbjct: 234 GRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQ 293

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N    +AM  F +L   G +PD     + +++ G L  +  G+++HA+AIK    SD  +
Sbjct: 294 NSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYV 353

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N+L+DMYAKC  +     VF  +   D IS+  +I GY++      A+++F  ++   L
Sbjct: 354 KNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSL 413

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
               +   S+L   S    +  +K+IHG I++ G S DL   ++++DVY K   ++ ++ 
Sbjct: 414 KPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKA 473

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  + ++D+V W +MI     N    EA++LF  +  + +  +  T V+ ++ AS+L  
Sbjct: 474 VFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVS 533

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           +  G++ +  II+ G + +  V+++L+DMYA+CG +     +F     KD+I W SMI+ 
Sbjct: 534 MFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMIST 593

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              HG+ + A+ +F  M      P+++TF+ +L AC+H+GL++EG +  + M+  Y ++P
Sbjct: 594 YAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEP 653

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHYA +V+L GR+  L  A +F+  M IEP A VW +LL AC +  N E+G    +  
Sbjct: 654 GTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMA 713

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           L  DP + G  VL+SN++A+   W D +++R  M  +G+ K PG SWIE+  ++H+FIAR
Sbjct: 714 LLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIAR 773

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
            + H E+D IY  L E+T  L + GGY+  T
Sbjct: 774 GREHPEADVIYSLLDELTSIL-KNGGYLPDT 803



 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 162/495 (32%), Positives = 279/495 (56%), Gaps = 4/495 (0%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F+ N L+  Y+K    R AR+LFDRM  K ++V W S IS ++  G   +A+ LF   QR
Sbjct: 47  FLANLLLRAYSKLGRVRDARRLFDRMPHK-NLVSWGSAISMHAQHGCEEDAVALFAAFQR 105

Query: 154 V--GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
              G   N +   +AL+AC  S   + G ++H   V+ G +  VYV  ALI +YA+ G +
Sbjct: 106 ASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCI 165

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  V   L  K+ V+W +++TG+ Q      A++ F ++   G +PD+    +AVSA 
Sbjct: 166 DAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSAC 225

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             LG L  G++ H YA +    +D  + N L+D+Y KC  ++   ++F  M  ++ +SWT
Sbjct: 226 SALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWT 285

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
           T+IAGY QN+C  +A+ +F  +  EG   DV    S+L +C  L  + Q +++H + I+ 
Sbjct: 286 TMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKA 345

Query: 392 GL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
            L SD  + N+++D+Y KC ++  +R VFE++   D +S+ +MI  Y   G    A+++F
Sbjct: 346 NLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVF 405

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
             M   +++   +T VS L  +SS S ++  K+++G I++ G +L+    SSL+D+Y++ 
Sbjct: 406 SKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKF 465

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
             ++ A  VFN +  +D+++W +MI     + +G+ A+ LF +++    AP+  TF+AL+
Sbjct: 466 SLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALV 525

Query: 571 YACSHSGLINEGKKF 585
              S    +  G++F
Sbjct: 526 TVASTLVSMFHGQQF 540



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 172/598 (28%), Positives = 300/598 (50%), Gaps = 13/598 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G +  A  +FD +  +   TW A++  Y   G+    LE + +M + G+  D F 
Sbjct: 158 LYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFV 217

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + AC+ L  L+ G + HG   +   ++   ++N+L+ +Y KC     AR+LFD M 
Sbjct: 218 LASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCM- 276

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  ++V W ++I+ Y  +    EA+ +F ++ + G   + +   + L +C   +    G 
Sbjct: 277 ENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGR 336

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +K+      YV N+LI MYA+C  +TEA  V   L   D++S+N+M+ G+ +  
Sbjct: 337 QVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLG 396

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+  F +++    KP  +  V+ +  S     +   K++H   +K G   DL  G+
Sbjct: 397 DLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGS 456

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+D+Y+K   V     VF  M  +D + W  +I G AQN    +A++LF  +Q+ GL  
Sbjct: 457 SLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAP 516

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           +     +++   S L  M   ++ H  II+ G  SD  + NA++D+Y KCG I   R +F
Sbjct: 517 NEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLF 576

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           ES   KDV+ W SMIS+Y  +G A EAL +F +M    VE + +T V  LSA +   ++ 
Sbjct: 577 ESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVD 636

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMIN 536
           +G     F+  K + +E      +S+V+++ R G L  A +    +  +    +W S+++
Sbjct: 637 EGLRHFDFMKTK-YAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLS 695

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
           A  L G    G+ A ++    +     P     ++ +YA    GL ++ +K  + M C
Sbjct: 696 ACHLFGNVEIGRYATEMALLADPADSGPS--VLMSNIYAS--RGLWSDAQKLRQGMDC 749



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 260/502 (51%), Gaps = 12/502 (2%)

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA  V +G    +++AN L+  Y++ G++ +A  +  ++ +K+ VSW S ++   Q+   
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 243 CKAMQFFRELQGA--GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             A+  F   Q A  G+ P++    +A+ A  +   +  G+++H  A++ G   ++ +G 
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+++YAK  C++    VF  +  ++ ++WT +I GY+Q      ALELF  + L+G+  
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D  ++ S + ACS L  +   ++ HGY  R  + +D  ++NA++D+Y KC  +  +R +F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +E++++VSWT+MI+ Y+ N    EA+ +F+ +++   + D     S L++  SL+ + 
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +G++++   I+     +  V +SL+DMYA+C  L  A  VF  +   D I + +MI    
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYS 393

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPW 598
             G    AID+F KM   S  P  +TF++LL   S    I   K+    I++    LD +
Sbjct: 394 RLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLY 453

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL- 657
               + L+D+  + + +E+A      M       +W A++      +  E GE   K   
Sbjct: 454 AG--SSLIDVYSKFSLVEDAKAVFNLMHNRDMV-IWNAMIFGL---AQNEQGEEAVKLFN 507

Query: 658 -LELDPGNPGNYVLISNVFAAS 678
            L++    P  +  ++ V  AS
Sbjct: 508 QLQVSGLAPNEFTFVALVTVAS 529



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 259/510 (50%), Gaps = 25/510 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  +  A +LFD +  R + +W  M+  Y+ N      +  + ++   G   D F 
Sbjct: 259 LYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFA 318

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ +C  L  +  G ++H   +K   +S +++ NSL+ MYAKC    +AR +F+ + 
Sbjct: 319 CASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALA 378

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E +D + +N++I  YS  G    A+ +F +M+   L  +  TFV+ L      S   L  
Sbjct: 379 E-DDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSK 437

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   VKSG +L +Y  ++LI +Y++   + +A  V   + N+D V WN+M+ G  QN+
Sbjct: 438 QIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNE 497

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ F +LQ +G  P++   V  V+ +  L ++ +G++ HA  IK G  SD  + N
Sbjct: 498 QGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSN 557

Query: 301 TLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            L+DMYAKC  +   GR+ ++ T  +D I W ++I+ YAQ+    +AL +FR +   G++
Sbjct: 558 ALIDMYAKCGFIKE-GRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVE 616

Query: 360 ADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
            + +    VL AC+       GL+     K    Y I  G        ++V+++G+ G +
Sbjct: 617 PNYVTFVGVLSACAHAGLVDEGLRHFDFMKT--KYAIEPGTEHYA---SVVNLFGRSGKL 671

Query: 413 DYSRNVFESIESKDVVS-WTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSA 468
             ++   E +  +   + W S++S+   + +  +   A E+  L + A  +S    L+S 
Sbjct: 672 HAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPA--DSGPSVLMSN 729

Query: 469 LSAASSL----SILKKGKELNGFIIRKGFN 494
           + A+  L      L++G +  G +   G++
Sbjct: 730 IYASRGLWSDAQKLRQGMDCAGVVKEPGYS 759



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 230/449 (51%), Gaps = 12/449 (2%)

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A  RL  LL     HA A+  G + DL + N L+  Y+K   V    R+F +M  ++ +S
Sbjct: 22  AGDRLHRLL--PLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVS 79

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLE--GLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           W + I+ +AQ+ C   A+ LF   Q    G   +  ++ S L AC+  + +S  +++HG 
Sbjct: 80  WGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGV 139

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            +R GL  ++ +  A++++Y K G ID +  VF+++  K+ V+WT++I+ Y   G    A
Sbjct: 140 AVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVA 199

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           LELF  M    V  D   L SA+SA S+L  L+ G++ +G+  R     + SV ++L+D+
Sbjct: 200 LELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDL 259

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y +C  L +A K+F+C++ ++L+ WT+MI     +     A+ +F+++  E + PD    
Sbjct: 260 YCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFAC 319

Query: 567 LALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
            ++L +C     I +G++     ++ + + D + ++   L+D+  +  HL EA     ++
Sbjct: 320 ASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKN--SLIDMYAKCEHLTEARAVFEAL 377

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAK-KLLELDPGNPGNYVLISNVFAASRKWKDV 684
             +        + G  R+       ++ +K +   L P +P  +V +  V ++    +  
Sbjct: 378 AEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKP-SPLTFVSLLGVSSSQSAIELS 436

Query: 685 EQVR--MRMRGSGLKKTPGSSWIEIGNKI 711
           +Q+   +   G+ L    GSS I++ +K 
Sbjct: 437 KQIHGLIVKSGTSLDLYAGSSLIDVYSKF 465


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/564 (40%), Positives = 343/564 (60%), Gaps = 3/564 (0%)

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           R  +LL G+++HA+ IK G      + + L++ Y+K        +VF +   +   +W++
Sbjct: 66  RSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSS 125

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           +I+ +AQN   + A++ F  +  E L  D  I  S   AC+ L      K +H  +I+ G
Sbjct: 126 VISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTG 185

Query: 393 LS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
              D+ + +++VD+Y KCG+I  +RNVF+ +  ++VVSW+ MI  Y   G   EA+ LF 
Sbjct: 186 YDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFK 245

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
                 ++ +  TL S +    S ++L+ GK+++G   +  ++L G V SSL+ +Y++CG
Sbjct: 246 EALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCG 305

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            ++ A +VF+ V  K+L +W +M+ A   H   K A DLF KME     P+ ITFL +LY
Sbjct: 306 LIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLY 365

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           ACSH+GL+ EGKK+  +M+  Y+++P  +HYA +VDLLGRA  L+EA   ++ M  EPT 
Sbjct: 366 ACSHAGLVEEGKKYFALMK-KYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTE 424

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
            VW A +  CR+H N +L    A K+ EL   + G +V++SN +AA+ +++D  + R  +
Sbjct: 425 SVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKML 484

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           R  G+KK  G SWIE GN++H F A D+ H    EIY+KL ++ E++ER  GYVA T FV
Sbjct: 485 RDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMER-AGYVADTSFV 543

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           L  V  EEK Q +  HSERLAIA+G++    G  IRI KNLRVC DCH+  K +S+L GR
Sbjct: 544 LREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGR 603

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
            ++VRD NRFH FE G CSC DYW
Sbjct: 604 VIIVRDNNRFHRFEDGKCSCADYW 627



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 202/407 (49%), Gaps = 18/407 (4%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G +IHA  +KSG  +   V + LI  Y++      ++ V  + E K S +W+S+++ F Q
Sbjct: 73  GQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQ 132

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N+    A+Q+F  + G    PD     +A  A   LG    GK +H   IK G+  D+ +
Sbjct: 133 NEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFV 192

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G++L+DMYAKC  +     VF +M  ++ +SW+ +I GY Q   H +A+ LF+   LEGL
Sbjct: 193 GSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGL 252

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSR 416
           D +   + SV+  C     +   K+IHG   +    LS  V  ++++ +Y KCG I+ + 
Sbjct: 253 DVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFV-GSSLISLYSKCGLIEGAY 311

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF+ +  K++  W +M+ +   +    EA +LF  M  A +  + IT +  L A S   
Sbjct: 312 RVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAG 371

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDL-ILWTS 533
           ++++GK+   F + K + +E      +S+VD+  R G L  A  V   + T+    +W +
Sbjct: 372 LVEEGKKY--FALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGA 429

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
            I    +HG   +A          +FA D +  L  + +  H  L N
Sbjct: 430 FITGCRIHGNTDLA----------AFAADKVFELGAVSSGLHVMLSN 466



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 188/376 (50%), Gaps = 3/376 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            Y K    L + Q+F++  +++  TW++++ ++  N EP+  ++ + RM    +  D   
Sbjct: 98  FYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHI 157

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP   KACA+L   D G  +H LV+K GYD   F+ +SLV MYAKC D ++AR +FD M 
Sbjct: 158 FPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMP 217

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + +VV W+ +I  Y+  G+  EA+ LF+E    GL  N +T  + ++ C  ++   LG 
Sbjct: 218 HR-NVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGK 276

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH    K+  +L  +V ++LI++Y++CG +  A  V  ++  K+   WN+ML    Q+ 
Sbjct: 277 QIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHA 336

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F +++ AG +P+ +  +  + A    G +  GK+  A   K       Q   
Sbjct: 337 HTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYA 396

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAG-YAQNNCHLKALELFRTVQLEGL 358
           +++D+  +   +     V   M  +   S W   I G     N  L A    +  +L  +
Sbjct: 397 SMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAV 456

Query: 359 DADVMIIGSVLMACSG 374
            + + ++ S   A +G
Sbjct: 457 SSGLHVMLSNAYAAAG 472



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 184/366 (50%), Gaps = 13/366 (3%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G +IH  ++K G      + + L+  Y+K      + Q+F+   E++    W+S+IS+++
Sbjct: 73  GQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEE-SERKSSTTWSSVISSFA 131

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            + + + A+  F  M    L  + + F +A +AC       +G  +H   +K+G ++ V+
Sbjct: 132 QNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVF 191

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE--LQG 254
           V ++L+ MYA+CG + EA  V  ++ +++ VSW+ M+ G+ Q   + +AM+ F+E  L+G
Sbjct: 192 VGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEG 251

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
                  + +V  V  S  L  L  GK++H    K  +     +G++L+ +Y+KC  +  
Sbjct: 252 LDVNDFTLSSVIRVCGSATLLEL--GKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEG 309

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             RVF ++  ++   W  ++   AQ+    +A +LF  ++  G+  + +    VL ACS 
Sbjct: 310 AYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSH 369

Query: 375 LKCMSQTKE----IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS- 429
              + + K+    +  Y I  G        ++VD+ G+ G +  + +V + + ++   S 
Sbjct: 370 AGLVEEGKKYFALMKKYEIEPGTQHYA---SMVDLLGRAGKLQEALSVIKGMPTEPTESV 426

Query: 430 WTSMIS 435
           W + I+
Sbjct: 427 WGAFIT 432



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 138/287 (48%), Gaps = 6/287 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + +A  +FD++  R V +W+ M+  Y   GE    +  +    + G+ V+ FT
Sbjct: 199 MYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFT 258

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI+ C     L+ G +IHGL  K  YD + F+ +SL+++Y+KC     A ++FD + 
Sbjct: 259 LSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVP 318

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K ++ +WN+++ A +      EA  LF +M+  G+  N  TF+  L AC  +     G 
Sbjct: 319 IK-NLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGK 377

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG---F 236
           +  A   K           +++ +  R GK+ EA  V+  +  + + S W + +TG    
Sbjct: 378 KYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIH 437

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
              DL   A     EL GA      V   NA +A+GR  +    +++
Sbjct: 438 GNTDLAAFAADKVFEL-GAVSSGLHVMLSNAYAAAGRYEDAAKARKM 483


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/655 (37%), Positives = 379/655 (57%), Gaps = 34/655 (5%)

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN-SMLTGFVQNDLYCKAMQF 248
            +N+  + AN LI    RC        +L +  N  S+S N S+   + Q +L       
Sbjct: 8   SKNILGFTANFLI----RCK-------ILPRRSNTSSLSRNISVFASYEQEEL------- 49

Query: 249 FRELQGAGQKPDQVCTVNA------VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
                  G+  D+   V A      +    R G ++  K  H   ++     D+ + N L
Sbjct: 50  -----SPGRYSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVL 104

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           ++ Y+KC  V    +VF  M  +  +SW T+I  Y +N    +AL++F  ++ EG     
Sbjct: 105 INAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSE 164

Query: 363 MIIGSVLMACSGLKCMS-QTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
             I SVL AC G  C + + K++H   ++  L  +L +  A++D+Y KCG I+ +  VFE
Sbjct: 165 FTISSVLSAC-GANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFE 223

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
           S++ K  V+W+SM++ YV +    EAL L+      ++E +  TL S + A S+L+ L +
Sbjct: 224 SMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 283

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           GK+++  I + GF     VASS VDMYA+CG+L  +  +F+ VQ K++ LW ++I+    
Sbjct: 284 GKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAK 343

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           H R K  + LF KM+ +   P+ +TF +LL  C H+GL+ EG++F ++MR  Y L P   
Sbjct: 344 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVV 403

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY+C+VD+LGRA  L EAY+ ++S+  EPTA +W +LL +CRV  N EL E+ AKKL EL
Sbjct: 404 HYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFEL 463

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           +P N GN+VL+SN++AA+++W+++ + R  +R   +KK  G SWI+I +K+H F   + S
Sbjct: 464 EPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESS 523

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H    EI   L  +  +L R+ GY    +  LH+VE  +K ++L  HSE+LA+ +G++  
Sbjct: 524 HPRIREICTMLDNLVIEL-RKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCL 582

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            EGS +RI KNLR+CVDCH F K  S    R ++VRDANRFHHF  G CSCG++W
Sbjct: 583 PEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 216/423 (51%), Gaps = 10/423 (2%)

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           V  A  F+  LQ C  +         H  T++      V ++N LI  Y++CG +  A  
Sbjct: 60  VVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQ 119

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V   +  +  VSWN+M+  + +N +  +A+  F E++  G K  +    + +SA G   +
Sbjct: 120 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCD 179

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
            L  K+LH  ++K     +L +G  L+D+YAKC  +N   +VF  M  +  ++W++++AG
Sbjct: 180 ALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAG 239

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SD 395
           Y Q+  + +AL L+R  Q   L+ +   + SV+ ACS L  + + K++H  I + G  S+
Sbjct: 240 YVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSN 299

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + + ++ VD+Y KCG++  S  +F  ++ K++  W ++IS +  +    E + LF  M +
Sbjct: 300 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQ 359

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGAL 513
             +  + +T  S LS      ++++G+     ++R  + L  +V   S +VD+  R G L
Sbjct: 360 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVDILGRAGLL 418

Query: 514 DIANKVFNCVQTKDLI-LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLAL 569
             A ++   +  +    +W S++ +  +       +VA    +++E E+ A +H+  L+ 
Sbjct: 419 SEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPEN-AGNHV-LLSN 476

Query: 570 LYA 572
           +YA
Sbjct: 477 IYA 479



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 201/384 (52%), Gaps = 4/384 (1%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           V A  F  +++ CA    +      HG  ++        + N L+  Y+KC     ARQ+
Sbjct: 61  VQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQV 120

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M E+  +V WN++I  Y+ +    EAL +F EM+  G   + +T  + L AC  +  
Sbjct: 121 FDGMLER-SLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCD 179

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                ++H  ++K+  +L +YV  AL+ +YA+CG + +A  V   +++K SV+W+SM+ G
Sbjct: 180 ALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAG 239

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +VQ+  Y +A+  +R  Q    + +Q    + + A   L  L+ GK++HA   K GF S+
Sbjct: 240 YVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSN 299

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + + ++ +DMYAKC  +     +F ++  ++   W TII+G+A++    + + LF  +Q 
Sbjct: 300 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQ 359

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI-IRKGLS-DLVILNAIVDVYGKCGNID 413
           +G+  + +   S+L  C     + + +     +    GLS ++V  + +VD+ G+ G + 
Sbjct: 360 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 419

Query: 414 YSRNVFESIESKDVVS-WTSMISS 436
            +  + +SI  +   S W S+++S
Sbjct: 420 EAYELIKSIPFEPTASIWGSLLAS 443



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 151/283 (53%), Gaps = 3/283 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG V  A Q+FD + +R++ +WN M+G Y  N      L+ +  MR  G     FT 
Sbjct: 108 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTI 167

Query: 62  PCVIKACAMLKD-LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             V+ AC    D L+C  K+H L +K   D   ++  +L+ +YAKC     A Q+F+ M 
Sbjct: 168 SSVLSACGANCDALEC-KKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQ 226

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K  V  W+S+++ Y  S    EAL L+R  QR+ L  N +T  + + AC + +    G 
Sbjct: 227 DKSSVT-WSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 285

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA   KSG    V+VA++ + MYA+CG + E+  +  +++ K+   WN++++GF ++ 
Sbjct: 286 QMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHA 345

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
              + M  F ++Q  G  P++V   + +S  G  G +  G+  
Sbjct: 346 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 388



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + DA Q+F+ +  ++  TW++M+  YV +      L  Y R + + +  + FT
Sbjct: 208 LYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFT 267

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI AC+ L  L  G ++H ++ K G+ S  F+ +S V MYAKC   R++  +F  + 
Sbjct: 268 LSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 327

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK ++ LWN+IIS ++   +  E + LF +MQ+ G+  N  TF + L  C  +     G 
Sbjct: 328 EK-NIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGR 386

Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
                   + G +  V   + ++ +  R G ++EA  ++  +  + + S W S+L
Sbjct: 387 RFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLL 441


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/742 (34%), Positives = 405/742 (54%), Gaps = 60/742 (8%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMG-EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
            S ++ Y +  D   AR++FD     +  +  WN+++SAY  S +  +AL LF +M +  
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQ-- 80

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEA 214
              N  +F   +     S +   GM   A  V      +  V+  +++  Y + G + EA
Sbjct: 81  --RNTVSFNGMI-----SGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEA 133

Query: 215 AGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
             + +++  ++ VSW  M+ G ++      A + F  +     + D V   N +    ++
Sbjct: 134 EKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIP----EKDVVVVTNMIGGYCQV 189

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G L   +EL      +  V ++    T++  YAK   V+   ++F  M  ++ +SWT ++
Sbjct: 190 GRLDEAREL----FDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAML 245

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
            GY Q+    +A ELF  + ++ +           +AC                      
Sbjct: 246 MGYTQSGRMKEAFELFEAMPVKWI-----------VAC---------------------- 272

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
                N ++  +G  G +  +R +FE ++ +D  +W +MI  +   GL  EAL LF  M 
Sbjct: 273 -----NEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQ 327

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              V  +  +++S LS  +SL+ L  G++++  ++R  F+ +  VAS L+ MY +CG L 
Sbjct: 328 REGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLV 387

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A  +FN    KD+++W SMI     HG G+ A+++F+ M +    PD +TF+ +L ACS
Sbjct: 388 RAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACS 447

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           +SG + EG +  E M+C YQ++P  EHYAC+VDLLGRA  ++EA + V  M +EP A VW
Sbjct: 448 YSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVW 507

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALLGACR H   +L E+  +KL +L+P N G YVL+S+++A   +W+DVE +R ++   
Sbjct: 508 GALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRR 567

Query: 695 GLKKTPGSSWIEIGNKIHSFIARD-KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            + K PG SWIE+  K+H F   D KSH E   I + L +++  L RE GY     FVLH
Sbjct: 568 VI-KFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFL-REAGYCPDGSFVLH 625

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +V+EEEK   L  HSERLA+AYG+LK  EG  IR+ KNLRVC DCHS  KL++++ GRE+
Sbjct: 626 DVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREI 685

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           ++RDANRFHHF+ G CSC D+W
Sbjct: 686 ILRDANRFHHFKDGSCSCKDFW 707



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 143/582 (24%), Positives = 270/582 (46%), Gaps = 72/582 (12%)

Query: 2   YGKCGSVLDAEQLFD--KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           YG+ G + +A ++FD   + QRT+ +WNAM+ AY  + +P   L  + +M       +  
Sbjct: 29  YGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMP----QRNTV 84

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +F  +I                          + ++ N +VA          AR++FD M
Sbjct: 85  SFNGMI--------------------------SGYVKNGMVA---------DARKVFDVM 109

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E+ +VV W S++  Y   G   EA  LF EM R  +V+        L+       + L 
Sbjct: 110 PER-NVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLF 168

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             I    V       V V N +I  Y + G++ EA  +  +++ ++  +W +M++G+ +N
Sbjct: 169 DMIPEKDV-------VVVTN-MIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKN 220

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL-GNLLNGKELHAYAIKQGFVSDLQI 298
                A + F  +      P++    N VS +  L G   +G+   A+ + +       +
Sbjct: 221 GRVDVARKLFEVM------PER----NEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIV 270

Query: 299 G-NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
             N ++  +     ++    +F  M  +D  +W  +I  + +    L+AL LF  +Q EG
Sbjct: 271 ACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREG 330

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +  +   + SVL  C+ L  +   +++H  ++R     DL + + ++ +Y KCG++  ++
Sbjct: 331 VALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAK 390

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F     KDVV W SMI+ Y  +GL  EAL +F+ M  + V+ D +T +  LSA S   
Sbjct: 391 GIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSG 450

Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
            +K+G E+    ++  + +E  +   + +VD+  R G +D A ++   +  + D I+W +
Sbjct: 451 KVKEGFEIFE-AMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGA 509

Query: 534 MINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           ++ A   H +    +VA++   K+E ++  P     L+ +YA
Sbjct: 510 LLGACRNHMKLDLAEVAVEKLAKLEPKNAGP--YVLLSHMYA 549



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 122/531 (22%), Positives = 231/531 (43%), Gaps = 53/531 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGISVDA 58
           Y K G V DA ++FD + +R V +W +M+  YV  G   E  ++     R  V+  +V  
Sbjct: 93  YVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTV-- 150

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
                +I        +D   K+  ++     +    +V +++  Y +     +AR+LFD 
Sbjct: 151 -----MIGGLLKESRIDDAKKLFDMIP----EKDVVVVTNMIGGYCQVGRLDEARELFDE 201

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  + +V  W +++S Y+ +G+   A  LF  M       N  ++ A L     S     
Sbjct: 202 MKVR-NVFTWTTMVSGYAKNGRVDVARKLFEVMPE----RNEVSWTAMLMGYTQSGRMKE 256

Query: 179 GMEI-HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
             E+  A  VK      +   N +I  +   G+M  A  +   ++ +D  +WN+M+  F 
Sbjct: 257 AFELFEAMPVK-----WIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFE 311

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           +  L  +A+  F  +Q  G   +    ++ +S    L +L +G+++HA  ++  F  DL 
Sbjct: 312 RKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLY 371

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + + L+ MY KC  +     +F +   +D + W ++I GY+Q+    +AL +F  +   G
Sbjct: 372 VASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSG 431

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIH-----GYIIRKGLSDLVILNAIVDVYGKCGNI 412
           +  D +    VL ACS    + +  EI       Y +  G+     +   VD+ G+ G +
Sbjct: 432 VQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACM---VDLLGRAGRV 488

Query: 413 DYSRNVFESIE-SKDVVSWTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSA 468
           D +  + E +    D + W +++ +   ++   LA  A+E    +   N  +    L+S 
Sbjct: 489 DEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKN--AGPYVLLSH 546

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
           + A        KG+  +  ++RK  N         V  +  C  +++  KV
Sbjct: 547 MYAT-------KGRWRDVEVLRKKINRR-------VIKFPGCSWIEVEKKV 583



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG ++ A+ +F++   + V  WN+M+  Y  +G     L  +  M   G+  D  T
Sbjct: 379 MYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVT 438

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN--SLVAMYAKCYDFRKARQLFDR 118
           F  V+ AC+    +  G +I    +KC Y     I +   +V +  +     +A +L ++
Sbjct: 439 FIGVLSACSYSGKVKEGFEIFE-AMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEK 497

Query: 119 MGEKEDVVLWNSIISA 134
           M  + D ++W +++ A
Sbjct: 498 MPMEPDAIVWGALLGA 513


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/790 (33%), Positives = 399/790 (50%), Gaps = 113/790 (14%)

Query: 158 TNAYTFVAALQAC--EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT--- 212
           T A  + + LQ C  +     +L   +HA  + SG   + ++ N LI +Y++  K+    
Sbjct: 9   TAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYAR 68

Query: 213 ---------------------EAAGVL---------YQLENKDSVSWNSMLTGFVQNDLY 242
                                 AAG L           L  +DSV +N+M+T +  N   
Sbjct: 69  YLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDG 128

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL-LNGKELHAYAIKQGFVSDLQIGNT 301
             A++ F ++Q    +PD     + + A   +     + ++LH   +K G      + N 
Sbjct: 129 HAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNA 188

Query: 302 LMDMYAKCCCVNYMG---------RVFYQMTAQDFISWTTIIAGYAQNN----------- 341
           L+  Y KC                ++F +M  +D +SWTTII GY +NN           
Sbjct: 189 LISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNG 248

Query: 342 --------------------CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
                                +L+A E+FR + +  +  D     SV+  C+   C    
Sbjct: 249 TSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLG 308

Query: 382 KEIHGYIIRKGLSD-----LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           KE+H Y ++   +      + + NA++  Y KCG +D ++ +F  +  +D+VSW  ++S 
Sbjct: 309 KEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSG 368

Query: 437 YVHN-------------------------------GLANEALELFYLMNEANVESDSITL 465
           YV+                                G A EAL+ F  M     E      
Sbjct: 369 YVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAF 428

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
             A+ + S L  LK G++L+  ++R G+    S  ++L+ MYARCG +D A+ +F  +  
Sbjct: 429 AGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPC 488

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
            D I W +MI A G HG+G  AI+LF +M  E   PD I+FL ++ ACSH+GL+ EG+K+
Sbjct: 489 VDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKY 548

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
            + M   Y ++P  EHYA ++DLL RA    EA + + SM  EP A +W ALL  CR+H 
Sbjct: 549 FDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHG 608

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           N +LG   A++L EL P + G YVL+SN++A + +W D+ +VR  MR  G+KK PG SWI
Sbjct: 609 NIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWI 668

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
           E+ NK+HSF+  D +H E  +IY  L ++  ++ R+ GYV  T+ VLH+VE + K   L 
Sbjct: 669 EVENKVHSFLVGDANHPEVRQIYNYLEQLVLEM-RKIGYVPDTKCVLHDVESDLKEHELS 727

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
            HSE+LA+AYG +K   G+ +R+ KNLR+C DCH+  K +S++ GRE+VVRD  RFHHF 
Sbjct: 728 THSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFR 787

Query: 826 AGVCSCGDYW 835
            G CSCGDYW
Sbjct: 788 DGKCSCGDYW 797



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 156/672 (23%), Positives = 287/672 (42%), Gaps = 127/672 (18%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE--------------- 123
            +H  ++  G+     I+N L+ +Y+K      AR LFD + + +               
Sbjct: 34  PVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAG 93

Query: 124 -----------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
                            D V +N++I+AYS +     A+ LF +MQR     + YTF + 
Sbjct: 94  DLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSV 153

Query: 167 LQACE-DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK---------MTEAAG 216
           L A    +  E    ++H A VKSG      V NALI+ Y +C           M EA  
Sbjct: 154 LGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARK 213

Query: 217 VLYQLENKDSVSWNSMLTGFVQND-------------------------------LYCKA 245
           +  ++ N+D +SW +++TG+V+N+                               LY +A
Sbjct: 214 LFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEA 273

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GFVSD--LQIGNT 301
            + FR++  +  + D+    + +S     G    GKE+HAY +K       D  + + N 
Sbjct: 274 FEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNA 333

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH------------------ 343
           L+  Y KC  V+    +F +M  +D +SW  I++GY    C                   
Sbjct: 334 LITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSW 393

Query: 344 -------------LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
                         +AL+ F  ++L+G +         +++CS L  +   +++H  ++R
Sbjct: 394 IIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVR 453

Query: 391 KGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
            G  S L   NA++ +Y +CG +D +  +F ++   D +SW +MI++   +G   +A+EL
Sbjct: 454 YGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIEL 513

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYA 508
           F  M +  +  D I+ ++ +SA S   ++K+G++  +      G N +    + ++D+  
Sbjct: 514 FEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLC 573

Query: 509 RCGALDIANKVFNCVQTKD-LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH---I 564
           R G    A +V   +  +    +W +++    +HG   + I+   ++      P H    
Sbjct: 574 RAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERL--FELKPQHDGTY 631

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD------LLGRANHLE-- 616
             L+ +YA   +G  N+  K  ++MR D  +   P      V+      L+G ANH E  
Sbjct: 632 VLLSNMYAV--AGQWNDMAKVRKLMR-DRGVKKEPGCSWIEVENKVHSFLVGDANHPEVR 688

Query: 617 EAYQFVRSMQIE 628
           + Y ++  + +E
Sbjct: 689 QIYNYLEQLVLE 700



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 224/507 (44%), Gaps = 91/507 (17%)

Query: 2   YGKCGSVLDAEQLFD--KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           Y   G +  + ++F    +  R    +NAM+ AY  N +    +E +  M+      D +
Sbjct: 89  YSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNY 148

Query: 60  TFPCVIKACAML--KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD--------- 108
           TF  V+ A A++  K+  C  ++H  V+K G      ++N+L++ Y KC           
Sbjct: 149 TFTSVLGALALVAEKEKHC-QQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSL 207

Query: 109 FRKARQLFDRMGEKEDV------------------------------VLWNSIISAYSAS 138
             +AR+LFD M  ++++                              V WN++IS Y+  
Sbjct: 208 MAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHR 267

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G  LEA  +FR+M    +  + +TF + +  C ++    LG E+HA  +K+  N    VA
Sbjct: 268 GLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVA 327

Query: 199 ----NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ-----------NDLYC 243
               NALI  Y +CGK+  A  +  ++  +D VSWN +L+G+V            N++  
Sbjct: 328 MPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPE 387

Query: 244 K--------------------AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           K                    A++FF  ++  G +P       A+ +   LG+L +G++L
Sbjct: 388 KNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQL 447

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           HA  ++ G+ S L  GN L+ MYA+C  V+    +F  M   D ISW  +IA   Q+   
Sbjct: 448 HAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQG 507

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDL 396
            +A+ELF  +  EG+  D +   +V+ ACS       G K       ++G        D 
Sbjct: 508 TQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVN-----PDE 562

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIE 423
                I+D+  + G    ++ V ES+ 
Sbjct: 563 EHYARIIDLLCRAGKFSEAKEVMESMP 589



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 183/459 (39%), Gaps = 128/459 (27%)

Query: 259 PDQVCTVNAVSASGRLGNLLN------------GKELHAYAIKQGFVSDLQIGNTLMDMY 306
           PD + T     A+ R G+LL              + +HA+ I  GF     I N L+D+Y
Sbjct: 4   PDSIRT-----AANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIY 58

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIA------------------------------- 335
           +K   +NY   +F ++   D ++ TT+IA                               
Sbjct: 59  SKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAM 118

Query: 336 --GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL-KCMSQTKEIHGYIIRKG 392
              Y+ N+    A+ELF  +Q +    D     SVL A + + +     +++H  +++ G
Sbjct: 119 ITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSG 178

Query: 393 LSDLV-ILNAIVDVYGKCGN---------IDYSRNVFESIESKDVVSWTS---------- 432
              +  +LNA++  Y KC           +  +R +F+ + ++D +SWT+          
Sbjct: 179 TGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNND 238

Query: 433 ---------------------MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
                                MIS Y H GL  EA E+F  M  + ++ D  T  S +S 
Sbjct: 239 LDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISV 298

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVA----SSLVDMYARCGALDIANKVFNCVQTKD 527
            ++    + GKE++ + ++   N    VA    ++L+  Y +CG +DIA ++FN +  +D
Sbjct: 299 CANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERD 358

Query: 528 LILWT-------------------------------SMINANGLHGRGKVAIDLFYKMEA 556
           L+ W                                 MI+     G  + A+  F +M+ 
Sbjct: 359 LVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKL 418

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQ 594
           + F P    F   + +CS  G +  G++   +++R  Y+
Sbjct: 419 QGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYE 457



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 56/279 (20%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVS-----------NGEPLR-------- 41
            Y KCG V  A+++F+K+ +R + +WN +L  YV+           N  P +        
Sbjct: 337 FYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIM 396

Query: 42  ------------VLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                        L+ ++RM++ G     + F   I +C++L  L  G ++H  V++ GY
Sbjct: 397 ISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGY 456

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           +S+    N+L+ MYA+C     A  LF  M    D + WN++I+A    GQ  +A+ LF 
Sbjct: 457 ESSLSAGNALITMYARCGVVDAAHCLFINM-PCVDAISWNAMIAALGQHGQGTQAIELFE 515

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL-----QVYVANA---- 200
           EM + G++ +  +F+  + AC            HA  VK G+        VY  N     
Sbjct: 516 EMLKEGILPDRISFLTVISACS-----------HAGLVKEGRKYFDSMHNVYGVNPDEEH 564

Query: 201 ---LIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
              +I +  R GK +EA  V+  +  +     W ++L G
Sbjct: 565 YARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAG 603


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/561 (39%), Positives = 342/561 (60%), Gaps = 2/561 (0%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           NL   +++HA     G   +L + N L+ MY +   +     +F  M+ +   SW+ I+ 
Sbjct: 65  NLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVG 124

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
           GYA+         +FR +   G   D      V+ AC  LK +   + IH   ++ GL  
Sbjct: 125 GYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDY 184

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
              +   +VD+Y +C  ++ +  +F  +  +D+ +WT MI +   +G+  E+L  F  M 
Sbjct: 185 GHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMR 244

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              +  D + LV+ + A + L  + K K ++ +I   G++L+  + ++++DMYA+CG+++
Sbjct: 245 NQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVE 304

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A  +F+ +Q +++I W++MI A G HG+G+ A++LF  M      P+ ITF++LLYACS
Sbjct: 305 SARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACS 364

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           H+GLI EG++F   M  +Y + P  +HY C+VDLLGRA  L+EA + +  M +E    +W
Sbjct: 365 HAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLW 424

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALLGACR+H + +L E VA+ LL+L    PG+YVL+SN++A + KW+D+ + R  M   
Sbjct: 425 GALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKG 484

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           GL+K PG +WIE+G K++ F   DK+H  S+EIYK L  + EKLE   GY   T  VL++
Sbjct: 485 GLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLE-VAGYHPDTNDVLYD 543

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           V+EE K  +LY HSE+LAIA+G+L   +G  IRITKNLRVC DCH+FCK VS +  + ++
Sbjct: 544 VDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTII 603

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           VRDA RFHHF+ GVCSC DYW
Sbjct: 604 VRDAKRFHHFKEGVCSCRDYW 624



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 160/309 (51%), Gaps = 2/309 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + G++ DA++LFD +S+R  ++W+ ++G Y   G        +  +   G  +D ++
Sbjct: 94  MYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYS 153

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
            P VI+AC  LKDL CG  IH + LKCG D   F+  +LV MYA+C     A Q+F +M 
Sbjct: 154 APVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMW 213

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+  W  +I A + SG  +E+L  F  M+  G+V +    V  + AC          
Sbjct: 214 -KRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAK 272

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IHA    +G +L V +  A+I MYA+CG +  A  +  +++ ++ ++W++M+  +  + 
Sbjct: 273 AIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHG 332

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIG 299
              KA++ F  +  +G  P+++  V+ + A    G +  G+   +    + G   D++  
Sbjct: 333 QGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHY 392

Query: 300 NTLMDMYAK 308
             ++D+  +
Sbjct: 393 TCMVDLLGR 401



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 177/361 (49%), Gaps = 4/361 (1%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H  +   G      + N L+ MY +      A++LFD M ++     W+ I+  Y+  
Sbjct: 71  QVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYS-WSVIVGGYAKV 129

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G       +FRE+ R G   + Y+    ++AC D      G  IH  T+K G +   +V 
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
             L+ MYARC  + +A  +  ++  +D  +W  M+    ++ +  +++ FF  ++  G  
Sbjct: 190 ATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIV 249

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           PD+V  V  V A  +LG +   K +HAY    G+  D+ +G  ++DMYAKC  V     +
Sbjct: 250 PDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWI 309

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F +M  ++ I+W+ +IA Y  +    KALELF  +   G+  + +   S+L ACS    +
Sbjct: 310 FDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLI 369

Query: 379 SQTKEIHGYIIRK-GLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMIS 435
            + +     +  + G++ D+     +VD+ G+ G +D +  + E +   KD V W +++ 
Sbjct: 370 EEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLG 429

Query: 436 S 436
           +
Sbjct: 430 A 430


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/749 (31%), Positives = 405/749 (54%), Gaps = 4/749 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFT 60
           Y   G + DA  LFD++  R + +W +++  Y  +G     +  +   +     V + F 
Sbjct: 63  YSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFL 122

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++AC   K +  G ++HG+ +K   D+  ++  +L+ +YAK     +A  +F  + 
Sbjct: 123 LASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALP 182

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  V  WN++I+ Y+  G    AL LF  M   G+  + +   +A+ AC    F   G 
Sbjct: 183 VRTPVT-WNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGR 241

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH    +S       V N LI +Y +C +++ A  +   +E ++ VSW +M++G++QN 
Sbjct: 242 QIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNS 301

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F  +  AG +PD     + +++ G L  +  G+++HA+ IK    +D  + N
Sbjct: 302 FNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKN 361

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  +     VF  +   D IS+  +I GY++N    +A+ +F+ ++   L  
Sbjct: 362 ALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRP 421

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
            ++   S+L   S    +  +K+IHG II+ G S DL   +A++DVY KC  ++ ++ VF
Sbjct: 422 SLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVF 481

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  KD+V W SMI  +  N    EA++LF  +  + +  +  T V+ ++ AS+L+ + 
Sbjct: 482 NMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMF 541

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G++ + +II+ G + +  V+++L+DMYA+CG +     +F     +D+I W SMI    
Sbjct: 542 HGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYA 601

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG  + A+ +F  M      P+++TF+ +L AC+H+G + EG      M+ +Y ++P  
Sbjct: 602 QHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGI 661

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHYA +V+L GR+  L  A +F+  M I+P A VW +LL AC +  N E+G   A+  L 
Sbjct: 662 EHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALL 721

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
            DP + G YVL+SN++A+   W DV  +R +M  SG  K  G SWIE+  ++H+FI R +
Sbjct: 722 ADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGR 781

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQT 748
            H E++ IY  L E+T  L +  GYV  T
Sbjct: 782 EHPEAELIYSVLDELT-SLIKNLGYVPDT 809



 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 198/675 (29%), Positives = 338/675 (50%), Gaps = 48/675 (7%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           IH      G     F+ N L+  Y+     R AR LFDRM  + ++V W S+IS Y+  G
Sbjct: 40  IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHR-NLVSWGSVISMYTQHG 98

Query: 140 QCLEALGLFREMQRVGL-VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           +   A+ LF   Q+    V N +   + L+AC  S   +LG ++H   VK   +  VYV 
Sbjct: 99  RDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVG 158

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
            ALI +YA+ G M EA  V + L  +  V+WN+++TG+ Q      A++ F  +   G +
Sbjct: 159 TALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVR 218

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           PD+    +AVSA   LG L  G+++H YA +    +D  + N L+D+Y KC  ++   ++
Sbjct: 219 PDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKL 278

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F  M  ++ +SWTT+I+GY QN+ + +A+ +F  +   G   D     S+L +C  L  +
Sbjct: 279 FDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAI 338

Query: 379 SQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
            Q ++IH ++I+  L +D  + NA++D+Y KC ++  +R VF+++   D +S+ +MI  Y
Sbjct: 339 WQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGY 398

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             N    EA+ +F  M   ++    +T VS L  +SS   ++  K+++G II+ G +L+ 
Sbjct: 399 SKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDL 458

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
             AS+L+D+Y++C  ++ A  VFN +  KD+++W SMI  +  + +G+ AI LF ++   
Sbjct: 459 YAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLS 518

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEH--------------- 601
             AP+  TF+AL+   S    +  G++F   I++     DP   +               
Sbjct: 519 GMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEG 578

Query: 602 --------------YACLVDLLGRANHLEEAYQFVRSM---QIEPTAEVWCALLGACRVH 644
                         +  ++    +  H EEA Q  R M   ++EP    +  +L AC  H
Sbjct: 579 RMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSAC-AH 637

Query: 645 SNKELGEIV-----AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           +   +GE +      K   +++PG   +Y  + N+F  S K    ++   RM      K 
Sbjct: 638 AGF-VGEGLNHFNSMKSNYDIEPGIE-HYASVVNLFGRSGKLHAAKEFIERMP----IKP 691

Query: 700 PGSSWIEIGNKIHSF 714
             + W  + +  H F
Sbjct: 692 AAAVWRSLLSACHLF 706



 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 171/551 (31%), Positives = 291/551 (52%), Gaps = 8/551 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G + +A  +F  +  RT  TWN ++  Y   G     LE + RM + G+  D F 
Sbjct: 164 LYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFV 223

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + AC+ L  L+ G +IHG   +   ++   ++N L+ +Y KC     AR+LFD M 
Sbjct: 224 LASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCM- 282

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  ++V W ++IS Y  +    EA+ +F  M + G   + +   + L +C   +    G 
Sbjct: 283 EYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGR 342

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  +K+      YV NALI MYA+C  +TEA  V   L   D++S+N+M+ G+ +N 
Sbjct: 343 QIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNR 402

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F+ ++    +P  +  V+ +  S     +   K++H   IK G   DL   +
Sbjct: 403 DLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAAS 462

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y+KC  VN    VF  +  +D + W ++I G+AQN    +A++LF  + L G+  
Sbjct: 463 ALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAP 522

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           +     +++   S L  M   ++ H +II+ G+ +D  + NA++D+Y KCG I   R +F
Sbjct: 523 NEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLF 582

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           ES   +DV+ W SMI++Y  +G A EAL++F LM EA VE + +T V  LSA +    + 
Sbjct: 583 ESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVG 642

Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMI 535
           +G  LN F  ++  +++E  +   +S+V+++ R G L  A +    +  K    +W S++
Sbjct: 643 EG--LNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLL 700

Query: 536 NANGLHGRGKV 546
           +A  L G  ++
Sbjct: 701 SACHLFGNAEI 711


>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/583 (39%), Positives = 351/583 (60%), Gaps = 9/583 (1%)

Query: 258 KP--DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC--VN 313
           KP  DQ   V A+    R+G+L   K + A+ ++     D  + + L++  A      V 
Sbjct: 2   KPMLDQGSLVAAIKRCTRVGDL---KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVA 58

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           Y  R+F      +   W TII GY+ ++  + A+ L+R + L G+  +    G VL AC 
Sbjct: 59  YAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACC 118

Query: 374 GLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L  + + +E+H  I++ GL  +  ++N ++ +Y  CG +DY+  +F+ +   D  SW++
Sbjct: 119 KLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWST 178

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           M+S Y  NG A EAL+LF  M   NV SD+ TL S +     L  L  GK ++ ++ ++G
Sbjct: 179 MVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEG 238

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
             ++  + ++LV MY++CG+LD A KVF  +  +D+  W++MI    +HG G+ A+ LF 
Sbjct: 239 VKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFD 298

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
            M+     P+ +TF ++L ACSHSGL+ +G +  E M  +Y++ P  +HY C+VDL  RA
Sbjct: 299 AMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRA 358

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
             +  A++F+++M IEP   +W  LLGAC+ H  K+LGE +++K+L+LDP +P NYVL+S
Sbjct: 359 GMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVS 418

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           NV+A+  +W  V QVR  M+    KK  G S IEI   +H FI  D+SH E ++IY  L 
Sbjct: 419 NVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLH 478

Query: 733 EITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNL 792
           ++  KL ++ G+V  T  VLH+++EEEK   L  HSERLAIAYG+L +  GS IRI KNL
Sbjct: 479 QMARKL-KQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNL 537

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           RVC DCH   KL+S ++ RE++VRD  RFHHF    CSC DYW
Sbjct: 538 RVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 189/386 (48%), Gaps = 9/386 (2%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD--FRKAR 113
           +D  +    IK C  + DL     I   +++       F+ + L+   A         A 
Sbjct: 5   LDQGSLVAAIKRCTRVGDLKA---IQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAH 61

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           ++F       ++ +WN+II  YS S   + A+ L+R+M   G+  N+YTF   L+AC   
Sbjct: 62  RIFS-CTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKL 120

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                G E+H+  VK G + +  + N LI +YA CG M  A  +  ++   DS SW++M+
Sbjct: 121 LRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMV 180

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           +G+ QN    +A++ FRE+Q      D     + V   G LG L  GK +H+Y  K+G  
Sbjct: 181 SGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVK 240

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            D+ +G  L+ MY+KC  ++   +VF  M  +D  +W+T+IAGYA +    KAL+LF  +
Sbjct: 241 IDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAM 300

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG--YIIRKGLSDLVILNAIVDVYGKCGN 411
           +      + +   SVL ACS    + +  +I    +   K    +     +VD++ + G 
Sbjct: 301 KRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGM 360

Query: 412 IDYSRNVFESIE-SKDVVSWTSMISS 436
           + ++    +++    +VV W +++ +
Sbjct: 361 VGHAHKFIQTMPIEPNVVLWRTLLGA 386



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 165/333 (49%), Gaps = 3/333 (0%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G V  A ++F       +F WN ++  Y  +  P+  +  Y  M + GIS +++TF  V+
Sbjct: 55  GHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVL 114

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           KAC  L  L  G ++H  ++K G D    +VN L+ +YA C     A  +FD M E  D 
Sbjct: 115 KACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEP-DS 173

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
             W++++S Y+ +GQ +EAL LFREMQ   + ++A+T  + +  C D     LG  +H+ 
Sbjct: 174 ASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSY 233

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
             K G  + V +  AL+ MY++CG +  A  V   +  +D  +W++M+ G+  +    KA
Sbjct: 234 MDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKA 293

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-HAYAIKQGFVSDLQIGNTLMD 304
           +Q F  ++ +   P+ V   + +SA    G +  G ++      +      ++    ++D
Sbjct: 294 LQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVD 353

Query: 305 MYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG 336
           ++ +   V +  +    M  + + + W T++  
Sbjct: 354 LFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGA 386



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CG +  A  +FD++ +    +W+ M+  Y  NG+ +  L+ +  M+   +S DAFT
Sbjct: 151 LYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFT 210

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+  C  L  LD G  +H  + K G      +  +LV MY+KC     A ++F  M 
Sbjct: 211 LASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMA 270

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DV  W+++I+ Y+  G   +AL LF  M+R   + N  TF + L AC  S     G 
Sbjct: 271 ER-DVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGH 329

Query: 181 EIHAAT-VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           +I      +     Q+     ++ ++ R G +  A   +  +    + V W ++L
Sbjct: 330 QIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLL 384


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/739 (34%), Positives = 409/739 (55%), Gaps = 13/739 (1%)

Query: 105 KCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFV 164
           KC D R A +LFD+M  K ++V +NS+IS Y       + + LF + +R+GL  + Y   
Sbjct: 13  KCGDTRSADKLFDKM-SKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71

Query: 165 AALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
            AL AC  S   + G  IH   +  G   QV + N+LI MY++CG++  A  +    +  
Sbjct: 72  GALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA--SGRLGNLLNGKE 282
           D VSWNS++ G+VQN  Y + +   +++   G   +     +A+ A  S   G  + G  
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTM 191

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ--- 339
           LH +AIK G   D+ +G  L+DMYAK   ++   ++F QM  ++ + +  ++AG  Q   
Sbjct: 192 LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQET 251

Query: 340 --NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
             + C  KAL LF  ++  G+   +    S+L AC  ++     K++H  + + GL SD 
Sbjct: 252 IEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDE 311

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            I + ++D+Y   G++  +   F SI +  +V  T+MI  Y+ NG    AL LFY +   
Sbjct: 312 YIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTY 371

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
             + D     + +S+ +++ +L+ G+++ G   + G +      +S + MYA+ G L  A
Sbjct: 372 EEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAA 431

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
           N  F  ++  D++ W++MI +N  HG    A+  F  M++    P+H  FL +L ACSH 
Sbjct: 432 NLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHR 491

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           GL+ EG ++ + M  DY++    +H  C+VDLLGRA  L +A   +  +  E    +W A
Sbjct: 492 GLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRA 551

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL ACR+H +    + VA+K++EL+P    +YVL+ N++  +       +VR  M    +
Sbjct: 552 LLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRI 611

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           KK PG SWI+IG+K++SF++ D+SH  S +IY KL E+    +R     +    + + +E
Sbjct: 612 KKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLD---SAKDILGYKIE 668

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
            E    + Y HSE+LA+A+GVL  +E + +R+ KNLR+C+DCH   KL S +  REL+VR
Sbjct: 669 HEHLTNVNY-HSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVR 727

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D+ RFHHF+ G CSCGDYW
Sbjct: 728 DSVRFHHFKDGSCSCGDYW 746



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 164/551 (29%), Positives = 283/551 (51%), Gaps = 17/551 (3%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           KCG    A++LFDK+S+  + T+N+++  YV      +V+  + + R LG+ +D +    
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
            + AC+   +L  G  IHGL+L  G  S   + NSL+ MY+KC     AR LFD   +K 
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDH-SDKL 131

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF---ETLGM 180
           D V WNS+I+ Y  +G+  E L + ++M + GL  N YT  +AL+AC  S+F   +  G 
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACS-SNFNGCKMFGT 190

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   +K G +L V V  AL+ MYA+ G + +A  +  Q+ +K+ V +N+M+ G +Q +
Sbjct: 191 MLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQE 250

Query: 241 LY---C--KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
                C  KA+  F E++  G KP      + + A   + +    K++HA   K G +SD
Sbjct: 251 TIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSD 310

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             IG+ L+D+Y+    +      F  +     +  T +I GY QN     AL LF  +  
Sbjct: 311 EYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLT 370

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDY 414
                D  I  +++ +C+ +  +   ++I G+  + G+S   I  N+ + +Y K G++  
Sbjct: 371 YEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYA 430

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +   F+ +E+ D+VSW++MI S   +G A EAL  F LM    +E +    +  L A S 
Sbjct: 431 ANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSH 490

Query: 475 LSILKKGKELNGF-IIRKGFNLEGSVAS--SLVDMYARCGAL-DIANKVFNCVQTKDLIL 530
             ++++G  L  F  + K + ++  V     +VD+  R G L D  + +       + ++
Sbjct: 491 RGLVEEG--LRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVM 548

Query: 531 WTSMINANGLH 541
           W ++++A  +H
Sbjct: 549 WRALLSACRIH 559



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 192/384 (50%), Gaps = 16/384 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  A  LFD   +    +WN+++  YV NG+   +L    +M   G++ + +T
Sbjct: 111 MYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYT 170

Query: 61  FPCVIKACAMLKDLDC---GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
               +KAC+   +  C   G  +H   +K G      +  +L+ MYAK      A Q+FD
Sbjct: 171 LGSALKACSSNFN-GCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFD 229

Query: 118 RMGEKEDVVLWNSIISAY----SASGQC-LEALGLFREMQRVGLVTNAYTFVAALQAC-- 170
           +M +K +VV++N++++      +   +C  +AL LF EM+  G+  + +T+ + L+AC  
Sbjct: 230 QMVDK-NVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACII 288

Query: 171 -EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
            ED  F     ++HA   K+G     Y+ + LI +Y+  G M +A      + N   V  
Sbjct: 289 VEDFKFAK---QVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPM 345

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
            +M+ G++QN  +  A+  F EL    +KPD+      +S+   +G L +G+++  +A K
Sbjct: 346 TAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATK 405

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
            G        N+ + MYAK   +      F QM   D +SW+T+I   AQ+   ++AL  
Sbjct: 406 VGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRF 465

Query: 350 FRTVQLEGLDADVMIIGSVLMACS 373
           F  ++  G++ +      VL+ACS
Sbjct: 466 FELMKSCGIEPNHFAFLGVLIACS 489



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 5/238 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   GS++DA   F+ +   T+    AM+  Y+ NGE    L  +  +       D F 
Sbjct: 320 LYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFI 379

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ +CA +  L  G +I G   K G        NS + MYAK  D   A   F +M 
Sbjct: 380 FSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQM- 438

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  D+V W+++I + +  G  +EAL  F  M+  G+  N + F+  L AC        G+
Sbjct: 439 ENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGL 498

Query: 181 EIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
             +  T++    ++++V +   ++ +  R G++ +A  ++ +L    + V W ++L+ 
Sbjct: 499 R-YFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSA 555


>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 249/736 (33%), Positives = 400/736 (54%), Gaps = 40/736 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG+   A +LF       VF+W A++G +   G     L  Y +M+  G+  D F 
Sbjct: 97  LYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFV 156

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
            P V+KAC +LK +  G  +H  V+K  G     ++  SLV MY KC     A ++FD M
Sbjct: 157 LPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEM 216

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E+ DV  WNS++  Y+ +G   EA+ +FREM+  G+            AC +S     G
Sbjct: 217 SERNDVT-WNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEG 275

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            + H   V  G  L   + ++++  Y + G + EA  V   +  KD V+WN ++ G+ Q 
Sbjct: 276 RQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQF 335

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            +  KA++    ++  G + D V     ++ +    +L+ G + HAY +K  F  D+ + 
Sbjct: 336 GMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVS 395

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           + ++DMYAKC  ++   RVF  +  +D + W T++A  A+     +AL+LF  +QLE + 
Sbjct: 396 SGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVP 455

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
            +V                                  V  N+++  + K G +  +RN+F
Sbjct: 456 PNV----------------------------------VSWNSLIFGFFKNGQVAEARNMF 481

Query: 420 ESIESKDV----VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             + S  V    ++WT+M+S  V NG  + A+ +F  M +  +  +S+++ SALS  +S+
Sbjct: 482 AEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSM 541

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           ++LK G+ ++G+++R+  +    + +S++DMYA+CG+LD A  VF    TK+L ++ +MI
Sbjct: 542 ALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMI 601

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           +A   HG+ + A+ LF +ME E   PDHIT  ++L ACSH GL+ EG K  + M  + Q+
Sbjct: 602 SAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQM 661

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
            P  EHY CLV LL     L+EA + + +M   P A +  +LL AC  +++ EL + +AK
Sbjct: 662 KPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNNDIELADYIAK 721

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
            LL+LDP N GNYV +SNV+AA  KW  V  +R  M+  GL+K PG SWIE+G ++H FI
Sbjct: 722 WLLKLDPDNSGNYVALSNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFI 781

Query: 716 ARDKSHSESDEIYKKL 731
           A D+SH +++EIY  L
Sbjct: 782 ASDRSHPKTEEIYVTL 797



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 266/521 (51%), Gaps = 18/521 (3%)

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           S+    G+  EA+    +M  + L      +   LQ C       L +++HA  +K G  
Sbjct: 24  SSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPT 83

Query: 193 --LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML-----TGFVQNDLYCKA 245
             L  +V + L+ +YA+CG    A  +     + +  SW +++     TGF +  L+   
Sbjct: 84  FALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFG-- 141

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLMD 304
              + ++Q  G  PD     N + A G L  +  GK +HA+ +K  G    + +  +L+D
Sbjct: 142 ---YIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVD 198

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           MY KC  V   G+VF +M+ ++ ++W +++  YAQN  + +A+ +FR ++L+G++  ++ 
Sbjct: 199 MYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVA 258

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           +     AC+  + + + ++ HG  +  GL  D V+ ++I++ Y K G I+ +  VF ++ 
Sbjct: 259 LSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMA 318

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            KDVV+W  +++ Y   G+  +ALE+  +M E  +  D +TL + L+ A+    L  G +
Sbjct: 319 VKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMK 378

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
            + + ++  F  +  V+S ++DMYA+CG +D A +VF+CV+ KD++LW +M+ A    G 
Sbjct: 379 AHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGL 438

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
              A+ LF++M+ ES  P+ +++ +L++    +G + E +     M C   + P    + 
Sbjct: 439 SGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEM-CSSGVMPNLITWT 497

Query: 604 CLVDLLGRANHLEEAYQFVRSMQ---IEPTAEVWCALLGAC 641
            ++  L +      A    R MQ   I P +    + L  C
Sbjct: 498 TMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGC 538



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 273/553 (49%), Gaps = 38/553 (6%)

Query: 36  NGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTD 93
           +G     + + ++M  L + V    +  +++ C   + L    ++H  V+K G  +   D
Sbjct: 29  HGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFALND 88

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F+++ LV +YAKC     A +LF R     +V  W +II  ++ +G C EAL  + +MQ+
Sbjct: 89  FVISKLVILYAKCGASEPATRLF-RDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQ 147

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS-GQNLQVYVANALIAMYARCGKMT 212
            GL  + +     L+AC    +   G  +HA  VK+ G    VYVA +L+ MY +CG + 
Sbjct: 148 DGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVE 207

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
           +A  V  ++  ++ V+WNSM+  + QN +  +A++ FRE++  G +   V      +A  
Sbjct: 208 DAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACA 267

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
               +  G++ H  A+  G   D  +G+++M+ Y K   +     VF  M  +D ++W  
Sbjct: 268 NSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNL 327

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           ++AGYAQ     KALE+   ++ EGL  D + + ++L   +  + +    + H Y ++  
Sbjct: 328 VVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKND 387

Query: 393 L-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
              D+V+ + I+D+Y KCG +D +R VF  +  KD+V W +M+++    GL+ EAL+LF+
Sbjct: 388 FEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFF 447

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR-C 510
            M   +V  + ++                    N  I   GF   G VA +  +M+A  C
Sbjct: 448 QMQLESVPPNVVS-------------------WNSLIF--GFFKNGQVAEAR-NMFAEMC 485

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
            +  + N          LI WT+M++    +G G  A+ +F +M+     P+ ++  + L
Sbjct: 486 SSGVMPN----------LITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSAL 535

Query: 571 YACSHSGLINEGK 583
             C+   L+  G+
Sbjct: 536 SGCTSMALLKHGR 548


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/786 (32%), Positives = 418/786 (53%), Gaps = 29/786 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K   +  A   F+ +  R V +WN+ML  Y+ NGE L+ +E +  M   GI  D  TF
Sbjct: 82  YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 141

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++K C+ L+D   G +IHG+V++ G D+     ++L+ MYAK   F ++ ++F  + E
Sbjct: 142 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 201

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K  V  W++II+    +     AL  F+EMQ+V    +   + + L++C   S   LG +
Sbjct: 202 KNSVS-WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQ 260

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  +KS       V  A + MYA+C  M +A  +    EN +  S+N+M+TG+ Q + 
Sbjct: 261 LHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH 320

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA+  F  L  +G   D++       A   +  L  G +++  AIK     D+ + N 
Sbjct: 321 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 380

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
            +DMY KC  +    RVF +M  +D +SW  IIA + QN    + L LF ++    ++ D
Sbjct: 381 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 440

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV-- 418
               GS+L AC+G   +    EIH  I++ G+ S+  +  +++D+Y KCG I+ +  +  
Sbjct: 441 EFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 499

Query: 419 --------------FESIESKDV----VSWTSMISSYVHNGLANEALELFYLMNEANVES 460
                          E + +K +    VSW S+IS YV    + +A  LF  M E  +  
Sbjct: 500 RFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITP 559

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D  T  + L   ++L+    GK+++  +I+K    +  + S+LVDMY++CG L  +  +F
Sbjct: 560 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 619

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
                +D + W +MI     HG+G+ AI LF +M  E+  P+H+TF+++L AC+H GLI+
Sbjct: 620 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 679

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           +G ++  +M+ DY LDP   HY+ +VD+LG++  ++ A + +R M  E    +W  LLG 
Sbjct: 680 KGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGV 739

Query: 641 CRVHSNK-ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           C +H N  E+ E     LL LDP +   Y L+SNV+A +  W+ V  +R  MRG  LKK 
Sbjct: 740 CTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKE 799

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG SW+E+ +++H F+  DK+H   +EIY++L  I  +++        + FV   VE EE
Sbjct: 800 PGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP----FDDSSFV-RGVEVEE 854

Query: 760 KVQMLY 765
           + Q  Y
Sbjct: 855 EDQWCY 860



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 287/565 (50%), Gaps = 27/565 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K    +++ ++F  + ++   +W+A++   V N      L+ +  M+ +   V    
Sbjct: 182 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 241

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+++CA L +L  G ++H   LK  + +   +  + + MYAKC + + A+ LFD   
Sbjct: 242 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN-S 300

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  +   +N++I+ YS      +AL LF  +   GL  +  +     +AC      + G+
Sbjct: 301 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 360

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +I+   +KS  +L V VANA I MY +C  + EA  V  ++  +D+VSWN+++    QN 
Sbjct: 361 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 420

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              + +  F  +  +  +PD+  T  ++  +   G+L  G E+H+  +K G  S+  +G 
Sbjct: 421 KGYETLFLFVSMLRSRIEPDEF-TFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGC 479

Query: 301 TLMDMYAKCCCVNYMGRV---FYQM-----TAQDF------------ISWTTIIAGYAQN 340
           +L+DMY+KC  +    ++   F+Q      T ++             +SW +II+GY   
Sbjct: 480 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 539

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
                A  LF  +   G+  D     +VL  C+ L      K+IH  +I+K L SD+ I 
Sbjct: 540 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 599

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           + +VD+Y KCG++  SR +FE    +D V+W +MI  Y H+G   EA++LF  M   N++
Sbjct: 600 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 659

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIAN 517
            + +T +S L A + + ++ KG E   +++++ + L+  +   S++VD+  + G +  A 
Sbjct: 660 PNHVTFISILRACAHMGLIDKGLEYF-YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 718

Query: 518 KVFNCVQTK-DLILWTSMINANGLH 541
           ++   +  + D ++W +++    +H
Sbjct: 719 ELIREMPFEADDVIWRTLLGVCTIH 743



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 261/521 (50%), Gaps = 35/521 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC ++ DA+ LFD        ++NAM+  Y       + L  + R+   G+  D  +
Sbjct: 283 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 342

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V +ACA++K L  G +I+GL +K        + N+ + MY KC    +A ++FD M 
Sbjct: 343 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM- 401

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V WN+II+A+  +G+  E L LF  M R  +  + +TF + L+AC   S    GM
Sbjct: 402 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL-GYGM 460

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEA-------------AGVLYQLENKDS- 226
           EIH++ VKSG      V  +LI MY++CG + EA             +G + +LE   + 
Sbjct: 461 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNK 520

Query: 227 ------VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
                 VSWNS+++G+V  +    A   F  +   G  PD+      +     L +   G
Sbjct: 521 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLG 580

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K++HA  IK+   SD+ I +TL+DMY+KC  ++    +F +   +DF++W  +I GYA +
Sbjct: 581 KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 640

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK--GL-SDLV 397
               +A++LF  + LE +  + +   S+L AC+ +  + +  E + Y++++  GL   L 
Sbjct: 641 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQLP 699

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNG---LANEALELFYL 452
             + +VD+ GK G +  +  +   +  E+ DV+  T +    +H     +A EA      
Sbjct: 700 HYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLR 759

Query: 453 MNEANVESDSITLVSALSAASSL--SILKKGKELNGFIIRK 491
           ++  +  S + TL+S + A + +   +    + + GF ++K
Sbjct: 760 LDPQD--SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 798



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 209/433 (48%), Gaps = 32/433 (7%)

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LG + HA  + SG     +V N L+ +Y        A+ V  ++  +D VSWN M+ G+ 
Sbjct: 24  LGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYS 83

Query: 238 QNDLYCKAMQFFR------------ELQGAGQKPDQVCTVNAVSASGRLGNLLNGK---- 281
           +++   KA  FF              L G  Q  + + ++      GR G   +G+    
Sbjct: 84  KSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI 143

Query: 282 ---------------ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
                          ++H   ++ G  +D+   + L+DMYAK        RVF  +  ++
Sbjct: 144 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 203

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SW+ IIAG  QNN    AL+ F+ +Q         I  SVL +C+ L  +    ++H 
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 263

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           + ++    +D ++  A +D+Y KC N+  ++ +F++ E+ +  S+ +MI+ Y       +
Sbjct: 264 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 323

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL LF+ +  + +  D I+L     A + +  L +G ++ G  I+   +L+  VA++ +D
Sbjct: 324 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 383

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY +C AL  A +VF+ ++ +D + W ++I A+  +G+G   + LF  M      PD  T
Sbjct: 384 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 443

Query: 566 FLALLYACSHSGL 578
           F ++L AC+   L
Sbjct: 444 FGSILKACTGGSL 456



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 174/343 (50%), Gaps = 5/343 (1%)

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N +++ Y+K   +      F  M  +D +SW ++++GY QN   LK++E+F  +  EG++
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D      +L  CS L+  S   +IHG ++R G  +D+V  +A++D+Y K      S  V
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ I  K+ VSW+++I+  V N L + AL+ F  M + N         S L + ++LS L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + G +L+   ++  F  +G V ++ +DMYA+C  +  A  +F+  +  +   + +MI   
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 315

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRCDYQLDP 597
                G  A+ LF+++ +     D I+   +  AC+    ++EG +   + ++    LD 
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 375

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
              + A  +D+ G+   L EA++    M+    A  W A++ A
Sbjct: 376 CVANAA--IDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 415


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/557 (39%), Positives = 357/557 (64%), Gaps = 3/557 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GK LH   +K+G   DL   N L++MY K   +    ++F +M  ++ IS+ T+I GYA+
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVI 398
           +   L+A+ELF  +  E L  +     SVL AC+ ++ ++   +IH ++I+ GL SD+ +
Sbjct: 117 SVRFLEAIELFVRLHREVL-PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 175

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            NA++DVY KCG ++ S  +F     ++ V+W ++I  +V  G   +AL LF  M E  V
Sbjct: 176 SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRV 235

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           ++  +T  SAL A +SL+ L+ G +++   ++  F+ +  V ++L+DMYA+CG++  A  
Sbjct: 236 QATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARL 295

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           VF+ +  +D + W +MI+   +HG G+ A+ +F KM+     PD +TF+ +L AC+++GL
Sbjct: 296 VFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGL 355

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           +++G+ +   M  D+ ++P  EHY C+V LLGR  HL++A + +  +  +P+  VW ALL
Sbjct: 356 LDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415

Query: 639 GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
           GAC +H++ ELG I A+++LE++P +   +VL+SN++A +++W +V  VR  M+  G+KK
Sbjct: 416 GACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKK 475

Query: 699 TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
            PG SWIE    +HSF   D SH E   I   L  +  K  ++ GY+     VL +VE+E
Sbjct: 476 EPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMK-TKKAGYIPNYNVVLLDVEDE 534

Query: 759 EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
           EK ++L+ HSERLA+++G++++  GS IRI KNLR+CVDCH+  K +S++  RE+VVRD 
Sbjct: 535 EKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDI 594

Query: 819 NRFHHFEAGVCSCGDYW 835
           NRFHHF+ G+CSCGDYW
Sbjct: 595 NRFHHFQEGLCSCGDYW 611



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 232/456 (50%), Gaps = 15/456 (3%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVT----NAYTFVAALQACEDSSFETLGMEIHA 184
           N+ +  +S  G  +++  L +E   VG V+    N++ +  ALQ C      + G  +H 
Sbjct: 5   NNFLIQFSRRGFSVQSAKLTQEF--VGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHC 62

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             +K G  L ++  N L+ MY +   + +A+ +  ++  ++++S+ +++ G+ ++  + +
Sbjct: 63  EILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLE 122

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A++ F  L      P+Q    + + A   +  L  G ++H + IK G  SD+ + N LMD
Sbjct: 123 AIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMD 181

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           +YAKC  +     +F +   ++ ++W T+I G+ Q     KAL LF  +    + A  + 
Sbjct: 182 VYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVT 241

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
             S L AC+ L  +    +IH   ++     D+V+ NA++D+Y KCG+I  +R VF+ + 
Sbjct: 242 YSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMN 301

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            +D VSW +MIS Y  +GL  EAL +F  M E  V+ D +T V  LSA ++  +L +G+ 
Sbjct: 302 KQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQA 361

Query: 484 -LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLH 541
                I   G        + +V +  R G LD A K+ + +     +++W +++ A  +H
Sbjct: 362 YFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIH 421

Query: 542 GR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
                G+++     +ME +  A  H+  L+ +YA +
Sbjct: 422 NDIELGRISAQRVLEMEPQDKAT-HV-LLSNMYATA 455



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 197/390 (50%), Gaps = 6/390 (1%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           ++  +   ++ C    +   G  +H  +LK G     F  N L+ MY K      A +LF
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           D M E+ + + + ++I  Y+ S + LEA+ LF  + R  ++ N +TF + LQAC      
Sbjct: 97  DEMPER-NTISFVTLIQGYAESVRFLEAIELFVRLHR-EVLPNQFTFASVLQACATMEGL 154

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            LG +IH   +K G +  V+V+NAL+ +YA+CG+M  +  +  +  +++ V+WN+++ G 
Sbjct: 155 NLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGH 214

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           VQ     KA++ F  +     +  +V   +A+ A   L  L  G ++H+  +K  F  D+
Sbjct: 215 VQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDI 274

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N L+DMYAKC  +     VF  M  QD +SW  +I+GY+ +    +AL +F  +Q  
Sbjct: 275 VVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQET 334

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDY 414
            +  D +    VL AC+    + Q +     +I+    +  I     +V + G+ G++D 
Sbjct: 335 EVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDK 394

Query: 415 SRNVFESIE-SKDVVSWTSMISS-YVHNGL 442
           +  + + I     V+ W +++ +  +HN +
Sbjct: 395 AVKLIDEIPFQPSVMVWRALLGACVIHNDI 424



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 154/281 (54%), Gaps = 2/281 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   + DA +LFD++ +R   ++  ++  Y  +   L  +E + R+    +  + FT
Sbjct: 82  MYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH-REVLPNQFT 140

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V++ACA ++ L+ G +IH  V+K G  S  F+ N+L+ +YAKC     + +LF    
Sbjct: 141 FASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESP 200

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DV  WN++I  +   G   +AL LF  M    +     T+ +AL+AC   +    G+
Sbjct: 201 HRNDVT-WNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGL 259

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH+ TVK+  +  + V NALI MYA+CG + +A  V   +  +D VSWN+M++G+  + 
Sbjct: 260 QIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG 319

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
           L  +A++ F ++Q    KPD++  V  +SA    G L  G+
Sbjct: 320 LGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQ 360



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 148/316 (46%), Gaps = 16/316 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + ++ +LF +   R   TWN ++  +V  G+  + L  +  M    +     T
Sbjct: 182 VYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVT 241

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +   ++ACA L  L+ G +IH L +K  +D    + N+L+ MYAKC   + AR +FD M 
Sbjct: 242 YSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMN 301

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K+D V WN++IS YS  G   EAL +F +MQ   +  +  TFV  L AC ++     G 
Sbjct: 302 -KQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQ 360

Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG-FV 237
               + ++  G    +     ++ +  R G + +A  ++ ++  + SV  W ++L    +
Sbjct: 361 AYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVI 420

Query: 238 QNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLN-GKELHAYAIK------ 289
            ND+    +   R L+   Q K   V   N  + + R  N+ +  K +    +K      
Sbjct: 421 HNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLS 480

Query: 290 ----QGFVSDLQIGNT 301
               QG V    +G+T
Sbjct: 481 WIESQGTVHSFTVGDT 496


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/750 (32%), Positives = 423/750 (56%), Gaps = 8/750 (1%)

Query: 1   MYGKCGSVLDAEQLFDK-----VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS 55
            Y KCGS  +A ++FDK     VS + V  WN+++  Y   G     +  + RM++ G+ 
Sbjct: 94  FYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVR 153

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            DA++  C++   A    L    +IHG  ++  +    F+ + L+ MY  C     A +L
Sbjct: 154 PDAYSL-CILLG-ASDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRL 211

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           F  + +K +VV WN +I  +  +G    +L ++   +   +   + +F + L AC    F
Sbjct: 212 FKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEF 271

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
            + GM++H   VK G     YV  +L+ MY++C  + +A  V  Q+  K +  WN+M++ 
Sbjct: 272 VSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISA 331

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +V N      ++ +++++     PD +   N +S+   +G+   G+ +HA  +K+   S+
Sbjct: 332 YVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSN 391

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + + + L+ MY+KC   +    +F  +  +D ++W ++I+G+ QN  +++ALE + ++ +
Sbjct: 392 VALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTV 451

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
            G   D  I+ SV+ AC+GLK ++    IHG  I+ GL  D+ + +++VD+Y K      
Sbjct: 452 YGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKM 511

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           S NVF  +  K++V+W S+IS Y  NGL + ++ LF  M +  +  DS+++ S L + SS
Sbjct: 512 SGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSS 571

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           +++L+KGK ++G++IR+    +  + ++L+DMY +CG L  A  +F  +   +L+ W  M
Sbjct: 572 VAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIM 631

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I   G HG    A+ LF +M +   APD ITF++LL +C+H G I EG K  ++M  ++ 
Sbjct: 632 IAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHG 691

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           ++P  EHY  +VDLLGRA  L++AY FV+++ IEP   +W +LL +CRVH N ELG++ A
Sbjct: 692 IEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAA 751

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
            KLL+++P    NYV + N++  +        +R  M+  GLKKTPG SWIE+GN I  F
Sbjct: 752 HKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWIEVGNSIDVF 811

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGY 744
            + D S   + EIY  L  +   + ++GG+
Sbjct: 812 FSGDSSSPRTIEIYDLLNSLRRNMRKKGGH 841



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 172/627 (27%), Positives = 315/627 (50%), Gaps = 28/627 (4%)

Query: 34  VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD 93
           V  G+ +  L+ YSR     ++   FT+P ++KAC  L +L  G  IH  ++  G+  +D
Sbjct: 28  VQQGQYVDALQFYSRNP---LNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSD 84

Query: 94  -FIVNSLVAMYAKCYDFRKARQLFDRMGEKE----DVVLWNSIISAYSASGQCLEALGLF 148
            +I  SL+  Y KC  F  A ++FD++ E E    DV  WNSI++ Y   G   E +  F
Sbjct: 85  PYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQF 144

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGM--EIHAATVKSGQNLQVYVANALIAMYA 206
             MQ  G+  +AY+    L A +      LG   +IH  +V+       ++ + LI MY 
Sbjct: 145 CRMQLFGVRPDAYSLCILLGASDGH----LGYAKQIHGYSVRKVFYGDPFLESGLIYMYF 200

Query: 207 RCGKMTEAAGVLYQLENK-DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
            CG+  +A  +  +LE+K + V+WN M+ GF +N L+  +++ +   +    K       
Sbjct: 201 SCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFT 260

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           + +SA  +   +  G ++H   +K GF +D  +  +L+ MY+KC  V     VF Q++ +
Sbjct: 261 STLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVK 320

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
               W  +I+ Y  N      L++++ +++  +  D +   +VL +C  +      + IH
Sbjct: 321 KTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIH 380

Query: 386 GYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
             ++++ + S++ + +A++ +Y KCGN D + ++F +I+ +DVV+W SMIS +  N    
Sbjct: 381 AELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYM 440

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
           EALE +  M     + DS  + S +SA + L  +  G  ++G  I+ G   +  VASSLV
Sbjct: 441 EALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLV 500

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMY++     ++  VF+ +  K+L+ W S+I+    +G   ++I LF +M      PD +
Sbjct: 501 DMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSV 560

Query: 565 TFLALLYACSHSGLINEGKK-----FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAY 619
           +  ++L + S   ++ +GK        + +  D QL+        L+D+  +   L+ A 
Sbjct: 561 SITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLE------NALIDMYIKCGFLKYAQ 614

Query: 620 QFVRSMQIEPTAEVWCALLGACRVHSN 646
              ++M ++     W  ++  C  H +
Sbjct: 615 HIFQNM-LQTNLVTWNIMIAGCGSHGD 640


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/786 (32%), Positives = 418/786 (53%), Gaps = 29/786 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K   +  A   F+ +  R V +WN+ML  Y+ NGE L+ +E +  M   GI  D  TF
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++K C+ L+D   G +IHG+V++ G D+     ++L+ MYAK   F ++ ++F  + E
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K  V  W++II+    +     AL  F+EMQ+V    +   + + L++C   S   LG +
Sbjct: 244 KNSVS-WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQ 302

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  +KS       V  A + MYA+C  M +A  +    EN +  S+N+M+TG+ Q + 
Sbjct: 303 LHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH 362

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA+  F  L  +G   D++       A   +  L  G +++  AIK     D+ + N 
Sbjct: 363 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 422

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
            +DMY KC  +    RVF +M  +D +SW  IIA + QN    + L LF ++    ++ D
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 482

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV-- 418
               GS+L AC+G   +    EIH  I++ G+ S+  +  +++D+Y KCG I+ +  +  
Sbjct: 483 EFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541

Query: 419 --------------FESIESKDV----VSWTSMISSYVHNGLANEALELFYLMNEANVES 460
                          E + +K +    VSW S+IS YV    + +A  LF  M E  +  
Sbjct: 542 RFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITP 601

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D  T  + L   ++L+    GK+++  +I+K    +  + S+LVDMY++CG L  +  +F
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
                +D + W +MI     HG+G+ AI LF +M  E+  P+H+TF+++L AC+H GLI+
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 721

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           +G ++  +M+ DY LDP   HY+ +VD+LG++  ++ A + +R M  E    +W  LLG 
Sbjct: 722 KGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGV 781

Query: 641 CRVHSNK-ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           C +H N  E+ E     LL LDP +   Y L+SNV+A +  W+ V  +R  MRG  LKK 
Sbjct: 782 CTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKE 841

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG SW+E+ +++H F+  DK+H   +EIY++L  I  +++        + FV   VE EE
Sbjct: 842 PGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP----FDDSSFV-RGVEVEE 896

Query: 760 KVQMLY 765
           + Q  Y
Sbjct: 897 EDQWCY 902



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 287/565 (50%), Gaps = 27/565 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K    +++ ++F  + ++   +W+A++   V N      L+ +  M+ +   V    
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+++CA L +L  G ++H   LK  + +   +  + + MYAKC + + A+ LFD   
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN-S 342

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  +   +N++I+ YS      +AL LF  +   GL  +  +     +AC      + G+
Sbjct: 343 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +I+   +KS  +L V VANA I MY +C  + EA  V  ++  +D+VSWN+++    QN 
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              + +  F  +  +  +PD+  T  ++  +   G+L  G E+H+  +K G  S+  +G 
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEF-TFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGC 521

Query: 301 TLMDMYAKCCCVNYMGRV---FYQM-----TAQDF------------ISWTTIIAGYAQN 340
           +L+DMY+KC  +    ++   F+Q      T ++             +SW +II+GY   
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 581

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
                A  LF  +   G+  D     +VL  C+ L      K+IH  +I+K L SD+ I 
Sbjct: 582 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 641

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           + +VD+Y KCG++  SR +FE    +D V+W +MI  Y H+G   EA++LF  M   N++
Sbjct: 642 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 701

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIAN 517
            + +T +S L A + + ++ KG E   +++++ + L+  +   S++VD+  + G +  A 
Sbjct: 702 PNHVTFISILRACAHMGLIDKGLEY-FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 760

Query: 518 KVFNCVQTK-DLILWTSMINANGLH 541
           ++   +  + D ++W +++    +H
Sbjct: 761 ELIREMPFEADDVIWRTLLGVCTIH 785



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 261/521 (50%), Gaps = 35/521 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC ++ DA+ LFD        ++NAM+  Y       + L  + R+   G+  D  +
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V +ACA++K L  G +I+GL +K        + N+ + MY KC    +A ++FD M 
Sbjct: 385 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM- 443

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V WN+II+A+  +G+  E L LF  M R  +  + +TF + L+AC   S    GM
Sbjct: 444 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL-GYGM 502

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEA-------------AGVLYQLENKDS- 226
           EIH++ VKSG      V  +LI MY++CG + EA             +G + +LE   + 
Sbjct: 503 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNK 562

Query: 227 ------VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
                 VSWNS+++G+V  +    A   F  +   G  PD+      +     L +   G
Sbjct: 563 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLG 622

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K++HA  IK+   SD+ I +TL+DMY+KC  ++    +F +   +DF++W  +I GYA +
Sbjct: 623 KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 682

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK--GL-SDLV 397
               +A++LF  + LE +  + +   S+L AC+ +  + +  E + Y++++  GL   L 
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQLP 741

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNG---LANEALELFYL 452
             + +VD+ GK G +  +  +   +  E+ DV+  T +    +H     +A EA      
Sbjct: 742 HYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLR 801

Query: 453 MNEANVESDSITLVSALSAASSL--SILKKGKELNGFIIRK 491
           ++    +S + TL+S + A + +   +    + + GF ++K
Sbjct: 802 LDPQ--DSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 840



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 216/453 (47%), Gaps = 34/453 (7%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           T  ++FV   + C       LG + HA  + SG     +V N L+ +Y        A+ V
Sbjct: 48  TTNFSFV--FKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR------------ELQGAGQKPDQVCTV 265
             ++  +D VSWN M+ G+ +++   KA  FF              L G  Q  + + ++
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165

Query: 266 NAVSASGRLGNLLNGK-------------------ELHAYAIKQGFVSDLQIGNTLMDMY 306
                 GR G   +G+                   ++H   ++ G  +D+   + L+DMY
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
           AK        RVF  +  ++ +SW+ IIAG  QNN    AL+ F+ +Q         I  
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           SVL +C+ L  +    ++H + ++    +D ++  A +D+Y KC N+  ++ +F++ E+ 
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           +  S+ +MI+ Y       +AL LF+ +  + +  D I+L     A + +  L +G ++ 
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
           G  I+   +L+  VA++ +DMY +C AL  A +VF+ ++ +D + W ++I A+  +G+G 
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGY 465

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
             + LF  M      PD  TF ++L AC+   L
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL 498



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 200/434 (46%), Gaps = 45/434 (10%)

Query: 249 FRELQGAGQKPDQVCTVNAVSAS---------GRLGNLLNGKELHAYAIKQGF------- 292
           +R +       D +  VN+VS +          + G L  GK+ HA+ I  GF       
Sbjct: 27  YRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVL 86

Query: 293 ------------------------VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
                                   + D+   N +++ Y+K   +      F  M  +D +
Sbjct: 87  NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           SW ++++GY QN   LK++E+F  +  EG++ D      +L  CS L+  S   +IHG +
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206

Query: 389 IRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           +R G  +D+V  +A++D+Y K      S  VF+ I  K+ VSW+++I+  V N L + AL
Sbjct: 207 VRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLAL 266

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
           + F  M + N         S L + ++LS L+ G +L+   ++  F  +G V ++ +DMY
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           A+C  +  A  +F+  +  +   + +MI        G  A+ LF+++ +     D I+  
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 386

Query: 568 ALLYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
            +  AC+    ++EG +   + ++    LD    + A  +D+ G+   L EA++    M+
Sbjct: 387 GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDEMR 444

Query: 627 IEPTAEVWCALLGA 640
               A  W A++ A
Sbjct: 445 -RRDAVSWNAIIAA 457


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/563 (39%), Positives = 353/563 (62%), Gaps = 8/563 (1%)

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G +   + +H +    G+     + NTL++MY K   ++    +F +M  ++ +SWTT+I
Sbjct: 30  GAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMI 89

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL- 393
           + Y+ +N + KAL+    +  EG+  ++    SVL AC GL  + Q   +HG I++ GL 
Sbjct: 90  SAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQ---LHGSILKVGLE 146

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
           SD+ + +A++D Y K G    + NVF  + + D+V W S+I  +  N   +E L L+  M
Sbjct: 147 SDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRM 206

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
             A+  +D  TL S L A + L++L+ G++++  +++  ++ +  + ++L+DMY +CG+L
Sbjct: 207 KRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSL 264

Query: 514 DIANKVFNCVQT-KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           + AN +F  + T KD+I W++MI     +G    A+ LF  M+++   P++IT L +L+A
Sbjct: 265 EDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFA 324

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CSH+GL+N+G  + + M+  + +DP  EHY C++DLLGRA  L+EA + +  M  EP A 
Sbjct: 325 CSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAV 384

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
            W  LLGACRVH N +L    AK++L+LDP + G Y+L+SN++A S+KW+DV +VR +MR
Sbjct: 385 TWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMR 444

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
             G+KK PG SWIE+  ++H+FI  D SH   +EI ++L+++ ++L R  GYV  T FVL
Sbjct: 445 TRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRL-GYVPDTNFVL 503

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
            ++E E+    L  HSE+LAI +G++       I I KNLR+C DCH F KLVS+L  R 
Sbjct: 504 QDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRV 563

Query: 813 LVVRDANRFHHFEAGVCSCGDYW 835
           +V+RD  R+HHF  GVCSCGDYW
Sbjct: 564 IVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 206/407 (50%), Gaps = 25/407 (6%)

Query: 40  LRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSL 99
           ++ +E   R R   +S DA T+  +IK C +   +     +H  V   GY+   F++N+L
Sbjct: 1   MKAMEAMHRNR---LSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTL 57

Query: 100 VAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN 159
           + MY K     +AR LFD M ++ +VV W ++ISAYS S    +AL     M R G+  N
Sbjct: 58  INMYVKFGLLDEARNLFDEMPDR-NVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPN 116

Query: 160 AYTFVAALQACEDSSFETLGM-EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
            YT+ + L+AC+      L + ++H + +K G    V+V +ALI  Y++ G+  +A  V 
Sbjct: 117 MYTYSSVLRACDG----LLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVF 172

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
            ++   D V WNS++ GF QN    + +  ++ ++ A    DQ    + + A   L  L 
Sbjct: 173 NEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLE 232

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ-MTAQDFISWTTIIAGY 337
            G+++H + +K  +  DL + N L+DMY KC  +     +F + MT +D ISW+T+IAG 
Sbjct: 233 LGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGL 290

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIR 390
           AQN     AL+LF  ++ +G   + + I  VL ACS       G       KE  G  I 
Sbjct: 291 AQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFG--ID 348

Query: 391 KGLSDLVILNAIVDVYGKCGNIDYS-RNVFESIESKDVVSWTSMISS 436
            G         I+D+ G+ G +D + + + E     D V+W  ++ +
Sbjct: 349 PGREH---YGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGA 392



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 193/379 (50%), Gaps = 14/379 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + +A  LFD++  R V +W  M+ AY ++    + L+    M   G+  + +T
Sbjct: 60  MYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYT 119

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V++AC  L +L    ++HG +LK G +S  F+ ++L+  Y+K  +   A  +F+ M 
Sbjct: 120 YSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMI 176

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D+V+WNSII  ++ +    E L L++ M+R   V +  T  + L+AC   +   LG 
Sbjct: 177 TG-DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGR 235

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY--QLENKDSVSWNSMLTGFVQ 238
           ++H   +K  Q+L   + NAL+ MY +CG + E A +L+   +  KD +SW++M+ G  Q
Sbjct: 236 QVHVHVLKYDQDL--ILNNALLDMYCKCGSL-EDANLLFTRMMTEKDVISWSTMIAGLAQ 292

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL-- 296
           N     A++ F  ++  G KP+ +  +  + A    G L+N    +  ++K+ F  D   
Sbjct: 293 NGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAG-LVNDGWYYFQSMKEHFGIDPGR 351

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQ 354
           +    ++D+  +   ++   ++ ++M  + D ++W  ++ A     N  L        ++
Sbjct: 352 EHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILK 411

Query: 355 LEGLDADVMIIGSVLMACS 373
           L+  DA   I+ S + A S
Sbjct: 412 LDPADAGTYILLSNIYANS 430



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 87/188 (46%), Gaps = 5/188 (2%)

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M+   + +D+IT    +        +++ + ++  +   G+  +  + ++L++MY + G 
Sbjct: 7   MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           LD A  +F+ +  ++++ WT+MI+A         A+D    M  E   P+  T+ ++L A
Sbjct: 67  LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           C   GL+N  +    I++   + D +    + L+D   +     +A      M I     
Sbjct: 127 C--DGLLNLRQLHGSILKVGLESDVFVR--SALIDTYSKLGEQHDALNVFNEM-ITGDLV 181

Query: 633 VWCALLGA 640
           VW +++G 
Sbjct: 182 VWNSIIGG 189


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/563 (38%), Positives = 356/563 (63%), Gaps = 9/563 (1%)

Query: 281 KELHAYAIKQGF-VSDLQIGNTL---MDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIA 335
           +++HA++I+ G  +SD ++G  L   +        ++Y  +VF ++    +   W T+I 
Sbjct: 34  RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 336 GYAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           GYA+    + A  L+R +++ GL + D      ++ A + +  +   + IH  +IR G  
Sbjct: 94  GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153

Query: 395 DLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
            L+ + N+++ +Y  CG++  +  VF+ +  KD+V+W S+I+ +  NG   EAL L+  M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
           N   ++ D  T+VS LSA + +  L  GK ++ ++I+ G       ++ L+D+YARCG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA-ESFAPDHITFLALLYA 572
           + A  +F+ +  K+ + WTS+I    ++G GK AI+LF  ME+ E   P  ITF+ +LYA
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CSH G++ EG ++   MR +Y+++P  EH+ C+VDLL RA  +++AY++++SM ++P   
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           +W  LLGAC VH + +L E    ++L+L+P + G+YVL+SN++A+ ++W DV+++R +M 
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
             G+KK PG S +E+GN++H F+  DKSH +SD IY KL E+T +L  E GYV Q   V 
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSE-GYVPQISNVY 512

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
            +VEEEEK   +  HSE++AIA+ ++ + E S I + KNLRVC DCH   KLVS+++ RE
Sbjct: 513 VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNRE 572

Query: 813 LVVRDANRFHHFEAGVCSCGDYW 835
           +VVRD +RFHHF+ G CSC DYW
Sbjct: 573 IVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 184/353 (52%), Gaps = 9/353 (2%)

Query: 11  AEQLFDKVSQR-TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFTFPCVIKAC 68
           A ++F K+ +   VF WN ++  Y   G  +     Y  MRV G +  D  T+P +IKA 
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW 128
             + D+  G  IH +V++ G+ S  ++ NSL+ +YA C D   A ++FD+M EK D+V W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK-DLVAW 190

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           NS+I+ ++ +G+  EAL L+ EM   G+  + +T V+ L AC      TLG  +H   +K
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            G    ++ +N L+ +YARCG++ EA  +  ++ +K+SVSW S++ G   N    +A++ 
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310

Query: 249 FRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN--TLMDM 305
           F+ ++   G  P ++  V  + A    G +  G E +   +++ +  + +I +   ++D+
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDL 369

Query: 306 YAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQLE 356
            A+   V         M  Q + + W T++ A     +  L      + +QLE
Sbjct: 370 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLE 422



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 212/423 (50%), Gaps = 31/423 (7%)

Query: 79  KIHGLVLKCGYDSTD--------FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           +IH   ++ G   +D        F + SL +     Y    A ++F ++ +  +V +WN+
Sbjct: 35  QIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSY----AHKVFSKIEKPINVFIWNT 90

Query: 131 IISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           +I  Y+  G  + A  L+REM+  GLV  + +T+   ++A    +   LG  IH+  ++S
Sbjct: 91  LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G    +YV N+L+ +YA CG +  A  V  ++  KD V+WNS++ GF +N    +A+  +
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            E+   G KPD    V+ +SA  ++G L  GK +H Y IK G   +L   N L+D+YA+C
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-LEG-LDADVMIIGS 367
             V     +F +M  ++ +SWT++I G A N    +A+ELF+ ++  EG L  ++  +G 
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG- 329

Query: 368 VLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE 420
           +L ACS       G +   + +E   Y I   +        +VD+  + G +  +    +
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMRE--EYKIEPRIEH---FGCMVDLLARAGQVKKAYEYIK 384

Query: 421 SIE-SKDVVSWTSMISSYVHNGLAN--EALELFYLMNEANVESDSITLVSALSAASSLSI 477
           S+    +VV W +++ +   +G ++  E   +  L  E N   D + L +  ++    S 
Sbjct: 385 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 444

Query: 478 LKK 480
           ++K
Sbjct: 445 VQK 447



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 119/237 (50%), Gaps = 6/237 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CG V  A ++FDK+ ++ +  WN+++  +  NG+P   L  Y+ M   GI  D FT
Sbjct: 165 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA +  L  G ++H  ++K G        N L+ +YA+C    +A+ LFD M 
Sbjct: 225 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLG 179
           +K  V  W S+I   + +G   EA+ LF+ M+   GL+    TFV  L AC        G
Sbjct: 285 DKNSVS-WTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 343

Query: 180 MEIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
            E +   ++    ++  + +   ++ + AR G++ +A   +  +  + +V  W ++L
Sbjct: 344 FE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 9/277 (3%)

Query: 369 LMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDV---YGKCGNIDYSRNVFESIE 423
           L+   G+  +++ ++IH + IR G  +SD  +   ++           + Y+  VF  IE
Sbjct: 21  LLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIE 80

Query: 424 SK-DVVSWTSMISSYVHNGLANEALELFYLMNEAN-VESDSITLVSALSAASSLSILKKG 481
              +V  W ++I  Y   G +  A  L+  M  +  VE D+ T    + A ++++ ++ G
Sbjct: 81  KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           + ++  +IR GF     V +SL+ +YA CG +  A KVF+ +  KDL+ W S+IN    +
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G+ + A+ L+ +M ++   PD  T ++LL AC+  G +  GK+ + +      L      
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR-VHVYMIKVGLTRNLHS 259

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
              L+DL  R   +EEA      M ++  +  W +L+
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 17/181 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
           +Y +CG V +A+ LFD++  +   +W +++     NG     +E +  M    G+     
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325

Query: 60  TFPCVIKACAMLKDLDCGAKIHGL----VLKCGYDSTDFI--VNSLVAMYAKCYDFRKAR 113
           TF  ++ AC+      CG    G      ++  Y     I     +V + A+    +KA 
Sbjct: 326 TFVGILYACS-----HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 380

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA---YTFVAALQAC 170
           +    M  + +VV+W +++ A +  G     L  F  +Q + L  N    Y  ++ + A 
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGD--SDLAEFARIQILQLEPNHSGDYVLLSNMYAS 438

Query: 171 E 171
           E
Sbjct: 439 E 439


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/679 (35%), Positives = 384/679 (56%), Gaps = 3/679 (0%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D  T    ++ C   K L  G  IH  +  CG+ S   +  SL+  Y  C+D+  A  +
Sbjct: 1   MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSS 174
           F       DV LWN+++SAY+ + + +EAL LF ++     V  + YT+   L+AC    
Sbjct: 61  FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  IH   +K+G    V+V ++L+ MYA+C +  +A  +  +   +D   WN++++
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            + ++     A++ F +++  G +P+ V     VS+  RL NL  GKE+H   I++  + 
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D  + + L+DMY KC C+     VF ++  ++ I+W  +I GY+        +EL   + 
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNID 413
            EG    +M + S++ A S    +   K IHGYI+R  +  D+ I  +++D Y KCG + 
Sbjct: 301 DEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  +F +I   +VVSW  MIS +V  G   +AL ++  M E +V+ D++T  S LSA S
Sbjct: 361 SAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACS 420

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            L+ L KG+EL+  II         V  +L+DMYA+CG +D A K+F+ +  +DL+ WTS
Sbjct: 421 QLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           MI A G HG+   A+ LF +M+  +   D +TFLA+L ACSH+GL++EG  +   M   Y
Sbjct: 481 MIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQY 540

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGEI 652
            + P  EHY+CL+DLLGRA  L EAY+ + RS +      +   L  AC +H+N  LG  
Sbjct: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQ 600

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
           + K L+E+DP +P  Y+L+SN++A+  KW +V +VR +M+  GLKK+PG SWIEI  +IH
Sbjct: 601 IGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIH 660

Query: 713 SFIARDKSHSESDEIYKKL 731
            F A DKS+  +D +Y+ L
Sbjct: 661 PFFAEDKSNPLADGVYECL 679



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 172/579 (29%), Positives = 299/579 (51%), Gaps = 8/579 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVS-QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDA 58
            Y  C     AE +F        V  WNA+L AY +N   +  L+ + ++     +  D 
Sbjct: 47  FYFSCHDYASAELVFQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDF 106

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           +T+P V+KAC  L  +  G +IH  +LK G     F+ +SL+ MYAKC  F  A +LFD 
Sbjct: 107 YTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDE 166

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
             ++ DV  WN++IS Y   G+   AL  F +M+ +G   N+ TF   + +C        
Sbjct: 167 FPQR-DVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLER 225

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G E+H   ++    L  +V +AL+ MY +CG +  A  V  ++  K++++WN+M+TG+  
Sbjct: 226 GKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSL 285

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                  ++    +   G KP  +   + + AS R   L +GK +H Y ++     D+ I
Sbjct: 286 KGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFI 345

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             +L+D Y KC  V+    +F  ++  + +SW  +I+G+     H++AL ++  ++   +
Sbjct: 346 DVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHV 405

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D +   S L ACS L  + + +E+H  II   L ++ +++ A++D+Y KCG++D +R 
Sbjct: 406 KPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARK 465

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  +  +D+VSWTSMI +Y  +G A+EAL LF  M + NV +DS+T ++ LSA S   +
Sbjct: 466 LFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGL 525

Query: 478 LKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN-CVQTK-DLILWTSM 534
           + +G    N  +++          S L+D+  R G L  A ++     +T+ D+ L +++
Sbjct: 526 VDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTL 585

Query: 535 INANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYA 572
            +A  LH    + I +   + E +   P     L+ +YA
Sbjct: 586 FSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYA 624


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/703 (34%), Positives = 393/703 (55%), Gaps = 8/703 (1%)

Query: 21  RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDL--DCGA 78
           R+ F WN++  A  S   P   L  Y+ M    +  D  TFP  + A A       D G 
Sbjct: 80  RSAFLWNSLSRALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGL 139

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H   L+ G+ +  F  N+LVA YA C     AR++FD M E+ DVV WNS++SA+  +
Sbjct: 140 ELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPER-DVVSWNSLVSAFLVN 198

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G   +A      M R G   N  + V+ + AC     E  G+ IHA  VK G N  V +A
Sbjct: 199 GMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLA 258

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           NAL+ MY + G +  +  V   +  ++ VSWNS +  F+    Y   ++ FR++      
Sbjct: 259 NALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVM 318

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P  +   + + A   LG+   G+E+H Y+IK+    D+ + N+L+DMYAK   +     +
Sbjct: 319 PGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTI 378

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F QM  ++ +SW  +IA   QN    +A  L   +Q  G   + + + +VL AC+ +  +
Sbjct: 379 FEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASL 438

Query: 379 SQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
              K+IH + IR+GL  DL I NA++D+Y KCG +  +RN+FE  E KD VS+ ++I  Y
Sbjct: 439 KMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSE-KDDVSYNTLILGY 497

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             +    E+L LF  M    ++ D+++ + ALSA ++LS+ K GKE++  ++R+  +   
Sbjct: 498 SQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHP 557

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            +++SL+D+Y + G L  A+K+FN +  KD+  W +MI   G+HG+  +A +LF  M+ +
Sbjct: 558 FLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGD 617

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
               DH++++A+L ACSH GL+++GKK+   M     ++P   HYAC+VDLLGRA  L +
Sbjct: 618 GLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSK 676

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
             + +R M     ++VW ALLGACR+H N EL +  A+ L EL P + G Y L+ N++A 
Sbjct: 677 CAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAE 736

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWI--EIGNKIHSFIARD 718
           + +W +  ++R  M+   ++K P  SW+  + GNK+ +F+  D
Sbjct: 737 TGRWNEANKIRKLMKSRKVQKNPAYSWVQDQDGNKLQAFLVGD 779



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 177/596 (29%), Positives = 323/596 (54%), Gaps = 15/596 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CG   DA ++FD++ +R V +WN+++ A++ NG           M   G  ++  + 
Sbjct: 164 YAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASL 223

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ AC   ++   G  IH L +K G ++   + N+LV MY K  D   + Q+FD M E
Sbjct: 224 VSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLE 283

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA-CEDSSFETLGM 180
           + +V  WNS I  +  +G   + L +FR+M    ++  + T  + L A  E  SF+ LG 
Sbjct: 284 QNEVS-WNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFD-LGR 341

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H  ++K   +L ++VAN+L+ MYA+ G + +A+ +  Q+++++ VSWN+M+   VQN 
Sbjct: 342 EVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNG 401

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A +   ++Q +G+ P+ +  VN + A  R+ +L  GK++HA++I++G + DL I N
Sbjct: 402 AETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISN 461

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  ++ + R  ++ + +D +S+ T+I GY+Q+    ++L LF+ ++  G+D 
Sbjct: 462 ALIDMYSKCGQLS-LARNIFERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDY 520

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVF 419
           D +     L AC+ L      KEIH  ++R+ LS    L N+++D+Y K G +  +  +F
Sbjct: 521 DAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIF 580

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I  KDV SW +MI  Y  +G  + A ELF LM    ++ D ++ ++ L+A S   ++ 
Sbjct: 581 NKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVD 640

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINAN 538
           KGK+    ++ +    +    + +VD+  R G L    ++   +    +  +W +++ A 
Sbjct: 641 KGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGAC 700

Query: 539 GLHGRGKVAIDLFYKMEAE---SFAPDHITFLALLYAC-SHSGLINEGKKFLEIMR 590
            +HG  ++A     +  AE      P+H  +  L+    + +G  NE  K  ++M+
Sbjct: 701 RIHGNIELA-----QWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMK 751



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 223/413 (53%), Gaps = 3/413 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGK G V  + Q+FD + ++   +WN+ +G +++ G    VL  + +M    +   + T
Sbjct: 264 MYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSIT 323

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A   L   D G ++HG  +K   D   F+ NSLV MYAK     KA  +F++M 
Sbjct: 324 LSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMK 383

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ +VV WN++I+    +G   EA  L  +MQ+ G   N+ T V  L AC   +   +G 
Sbjct: 384 DR-NVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGK 442

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA +++ G    ++++NALI MY++CG+++ A  + ++   KD VS+N+++ G+ Q+ 
Sbjct: 443 QIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNI-FERSEKDDVSYNTLILGYSQSP 501

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +++  F++++  G   D V  + A+SA   L    +GKE+H   +++       + N
Sbjct: 502 WCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN 561

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+D+Y K   +    ++F ++T +D  SW T+I GY  +     A ELF  ++ +GLD 
Sbjct: 562 SLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDY 621

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNI 412
           D +   +VL ACS    + + K+    ++ + +    +  A +VD+ G+ G +
Sbjct: 622 DHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQL 674



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 27/134 (20%), Positives = 62/134 (46%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G ++ A ++F+K++++ V +WN M+  Y  +G+     E +  M+  G+  D  +
Sbjct: 566 LYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVS 625

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+ AC+    +D G K    ++    +        +V +  +     K  ++   M 
Sbjct: 626 YIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMP 685

Query: 121 EKEDVVLWNSIISA 134
              +  +W +++ A
Sbjct: 686 FPANSDVWGALLGA 699


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/782 (32%), Positives = 428/782 (54%), Gaps = 8/782 (1%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D+  +  +++ C    D      IH  +LK G     F  N L+  Y K    + A  L
Sbjct: 47  LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M E+ +V  + ++   Y+    C + +GL+  + R G   N + F + L+       
Sbjct: 107 FDEMPERNNVS-FVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             +   +H+  VK G +   +V  ALI  Y+ CG +  A  V   +  KD V W  +++ 
Sbjct: 162 AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +V+N  +  +++    ++ AG  P+      A+ AS  LG     K +H   +K  +V D
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLD 281

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            ++G  L+ +Y +   ++   +VF +M   D + W+ +IA + QN    +A++LF  ++ 
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
             +  +   + S+L  C+  KC    +++HG +++ G   D+ + NA++DVY KC  +D 
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +  +F  + SK+ VSW ++I  Y + G   +A  +F       V    +T  SAL A +S
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L+ +  G +++G  I+     + +V++SL+DMYA+CG +  A  VFN ++T D+  W ++
Sbjct: 462 LASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNAL 521

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I+    HG G+ A+ +   M+     P+ +TFL +L  CS++GLI++G++  E M  D+ 
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           ++P  EHY C+V LLGR+  L++A + +  +  EP+  +W A+L A    +N+E     A
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSA 641

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           +++L+++P +   YVL+SN++A +++W +V  +R  M+  G+KK PG SWIE    +H F
Sbjct: 642 EEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYF 701

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
                 H +   I   L  +  K  R  GYV     VL ++++EEK + L+ HSERLA+A
Sbjct: 702 SVGLSDHPDMKLINGMLEWLNMKATR-AGYVPDRNAVLLDMDDEEKDKRLWVHSERLALA 760

Query: 775 YGVLK-STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
           YG+++  +  + I I KNLR+C DCHS  K++S +  R+LV+RD NRFHHF AGVCSCGD
Sbjct: 761 YGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGD 820

Query: 834 YW 835
           +W
Sbjct: 821 HW 822



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 215/438 (49%), Gaps = 4/438 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y  CGSV  A  +F+ +  + +  W  ++  YV NG     L+  S MR+ G   + +TF
Sbjct: 191 YSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF 250

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              +KA   L   D    +HG +LK  Y     +   L+ +Y +  D   A ++F+ M  
Sbjct: 251 DTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM-P 309

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DVV W+ +I+ +  +G C EA+ LF  M+   +V N +T  + L  C       LG +
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   VK G +L +YV+NALI +YA+C KM  A  +  +L +K+ VSWN+++ G+     
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA   FRE         +V   +A+ A   L ++  G ++H  AIK      + + N+
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+DMYAKC  + +   VF +M   D  SW  +I+GY+ +    +AL +   ++      +
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPN 549

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSD-LVILNAIVDVYGKCGNIDYSRNVF 419
            +    VL  CS    + Q +E    +IR  G+   L     +V + G+ G +D +  + 
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI 609

Query: 420 ESIE-SKDVVSWTSMISS 436
           E I     V+ W +M+S+
Sbjct: 610 EGIPYEPSVMIWRAMLSA 627



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 152/282 (53%), Gaps = 1/282 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G + DA ++F+++ +  V  W+ M+  +  NG     ++ + RMR   +  + FT
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++  CA+ K    G ++HGLV+K G+D   ++ N+L+ +YAKC     A +LF  + 
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +V  WN++I  Y   G+  +A  +FRE  R  +     TF +AL AC   +   LG+
Sbjct: 411 SKNEVS-WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV 469

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +K+    +V V+N+LI MYA+CG +  A  V  ++E  D  SWN++++G+  + 
Sbjct: 470 QVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHG 529

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           L  +A++    ++    KP+ +  +  +S     G +  G+E
Sbjct: 530 LGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQE 571


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/570 (37%), Positives = 353/570 (61%), Gaps = 3/570 (0%)

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
           A++A      L  G+++HA+ +K  +   + +   L+ +Y +C  ++    V   M  ++
Sbjct: 47  AITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERN 106

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SWT +I+GY+Q+  H +ALELF  +   G  A+   + +VL +C   + + Q +++H 
Sbjct: 107 VVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHS 166

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
            +++    S + + ++++D+YGK GNI  +R VF+ +  +D VS T++IS Y   GL +E
Sbjct: 167 LVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDE 226

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL+LF  +  + ++ + +T  + L++ S L+ L  GK+++G I+RK       + +SL+D
Sbjct: 227 ALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLID 286

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY++CG L  + +VF+ +  +  I W +M+   G HG G+  + LF  M  E   PD +T
Sbjct: 287 MYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTM-TEEVKPDSVT 345

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
            LA+L  CSH GL++EG    +++  +        HY C++DLLGR+  L++A   +  M
Sbjct: 346 LLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHM 405

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
             EPT  +W +LLGACRVH N  +GE+VA+KLL+++PGN GNYV++SN++AA+  WKDV 
Sbjct: 406 PFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVF 465

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
           +VR  M  + + K P  SWI +   IH+F + ++ H    +I  K+ E+   + +  G+V
Sbjct: 466 RVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDV-KAAGFV 524

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
                VLH+V++E+K +ML GHSE+LAI +G++ +  G  I++ KNLR+CVDCH+F K V
Sbjct: 525 PDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFV 584

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S+++GRE+ +RD NRFH  + G C+CGDYW
Sbjct: 585 SKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 213/384 (55%), Gaps = 4/384 (1%)

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
           + + AA+ AC +      G ++HA  VK+     VY+A  LI +Y RCG + +A  VL  
Sbjct: 42  HDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDG 101

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +  ++ VSW +M++G+ Q+  + +A++ F  +  AG K ++      +++     ++   
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           +++H+  +K  F S + +G++L+DMY K   +    +VF  +  +D +S T II+GYAQ 
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQL 221

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL- 399
               +AL+LFR +   G+  + +   ++L + SGL  ++  K++HG I+RK L   ++L 
Sbjct: 222 GLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQ 281

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N+++D+Y KCG + YSR VF+++  +  +SW +M+  Y  +G+  E ++LF  M E  V+
Sbjct: 282 NSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVK 340

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANK 518
            DS+TL++ LS  S   ++ +G ++   I++ +   +       ++D+  R G L  A  
Sbjct: 341 PDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALD 400

Query: 519 VFNCVQTKDL-ILWTSMINANGLH 541
           +   +  +    +W S++ A  +H
Sbjct: 401 LIEHMPFEPTPAIWGSLLGACRVH 424



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 199/393 (50%), Gaps = 5/393 (1%)

Query: 47  SRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC 106
           S + V G       +   I AC   + L  G ++H  ++K  Y    ++   L+ +Y +C
Sbjct: 30  SSLAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRC 89

Query: 107 YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
                AR + D M E+ +VV W ++IS YS SG+  EAL LF  M R G   N +T    
Sbjct: 90  GALDDARNVLDGMPER-NVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATV 148

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L +C          ++H+  VK+     ++V ++L+ MY + G + EA  V   L  +D+
Sbjct: 149 LTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDT 208

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           VS  ++++G+ Q  L  +A+  FR+L  +G + + V     +++   L +L  GK++H  
Sbjct: 209 VSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGL 268

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
            +++     + + N+L+DMY+KC  + Y  RVF  M  +  ISW  ++ GY ++    + 
Sbjct: 269 ILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEV 328

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVD 404
           ++LFRT+  E +  D + + +VL  CS    + +  +I   I+++  + + I     ++D
Sbjct: 329 VQLFRTMT-EEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVID 387

Query: 405 VYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
           + G+ G +  + ++ E +  +   + W S++ +
Sbjct: 388 LLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGA 420



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 166/328 (50%), Gaps = 10/328 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y +CG++ DA  + D + +R V +W AM+  Y  +G     LE + RM   G   + FT
Sbjct: 85  LYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFT 144

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +C + + +    ++H LV+K  ++S  F+ +SL+ MY K  + ++AR++FD + 
Sbjct: 145 LATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLP 204

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D V   +IIS Y+  G   EAL LFR++   G+  N  TF   L +    +    G 
Sbjct: 205 ER-DTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGK 263

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   ++      + + N+LI MY++CGK+  +  V   +  + ++SWN+ML G+ ++ 
Sbjct: 264 QVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHG 323

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +  + +Q FR +     KPD V  +  +S     G +  G ++    +K+         N
Sbjct: 324 IGQEVVQLFRTMT-EEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKE--------QN 374

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            ++ +    C ++ +GR      A D I
Sbjct: 375 AVIHIGHYGCVIDLLGRSGQLQKALDLI 402



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/153 (22%), Positives = 81/153 (52%), Gaps = 3/153 (1%)

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           +A++A      L +G++++  +++  +     +A+ L+ +Y RCGALD A  V + +  +
Sbjct: 46  AAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPER 105

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS-HSGLINEGKKF 585
           +++ WT+MI+     GR   A++LF +M       +  T   +L +C  H  +    +  
Sbjct: 106 NVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVH 165

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
             +++ +++   +    + L+D+ G++ +++EA
Sbjct: 166 SLVVKTNFESHMFVG--SSLLDMYGKSGNIQEA 196


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/584 (37%), Positives = 363/584 (62%), Gaps = 8/584 (1%)

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P Q    + + +  +  +L  G ++H   +  GF  D  +   L++MY +   ++   +V
Sbjct: 76  PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC--SGLK 376
           F +   +    W  +    A      + L+L+  +   G  +D      VL AC  S L 
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195

Query: 377 C--MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
              + + KEIH +I+R G  +++ ++  ++DVY K G++ Y+ +VF ++ +K+ VSW++M
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255

Query: 434 ISSYVHNGLANEALELFYLM--NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           I+ +  N +  +ALELF LM     N   +S+T+V+ L A + L+ L++GK ++G+I+R+
Sbjct: 256 IACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRR 315

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
             +    V ++L+ MY RCG + +  +VF+ ++ +D++ W S+I+  G+HG GK AI +F
Sbjct: 316 QLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIF 375

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
             M  +  +P +I+F+ +L ACSH+GL+ EGK   E M   Y++ P  EHYAC+VDLLGR
Sbjct: 376 ENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 435

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
           AN L EA + +  M  EP   VW +LLG+CR+H N EL E  +  L EL+P N GNYVL+
Sbjct: 436 ANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLL 495

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           ++++A ++ W + + V   +   GL+K PG SWIE+  K++SF++ D+ + + +EI+  L
Sbjct: 496 ADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALL 555

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKN 791
            +++ +++ + GYV QT  VL++++EEEK +++ GHSE+LA+A+G++ + +G  IRI KN
Sbjct: 556 VKLSNEMKAQ-GYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKN 614

Query: 792 LRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           LR+C DCH+  K +S+   RE++VRD NRFHHF  GVCSCGDYW
Sbjct: 615 LRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 187/389 (48%), Gaps = 16/389 (4%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  +I +CA    L  G  +H  ++  G+D   F+   L+ MY +     +A ++FD  
Sbjct: 80  TFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDET 139

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL- 178
            E+  + +WN++  A +  G   E L L+ +M  +G  ++ +T+   L+AC  S      
Sbjct: 140 RER-TIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCP 198

Query: 179 ---GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G EIHA  ++ G    ++V   L+ +YA+ G ++ A  V   +  K+ VSW++M+  
Sbjct: 199 LRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIAC 258

Query: 236 FVQNDLYCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           F +N++  KA++ F+ +  +     P+ V  VN + A   L  L  GK +H Y +++   
Sbjct: 259 FAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLD 318

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S L + N L+ MY +C  V    RVF  M  +D +SW ++I+ Y  +    KA+++F  +
Sbjct: 319 SILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENM 378

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTK-----EIHGYIIRKGLSDLVILNAIVDVYGK 408
             +G+    +   +VL ACS    + + K      +  Y I  G+        +VD+ G+
Sbjct: 379 IHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYA---CMVDLLGR 435

Query: 409 CGNIDYSRNVFESIE-SKDVVSWTSMISS 436
              +  +  + E +        W S++ S
Sbjct: 436 ANRLGEAIKLIEDMHFEPGPTVWGSLLGS 464



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 165/323 (51%), Gaps = 15/323 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + GS+  A ++FD+  +RT++ WNA+  A    G    +L+ Y +M  +G   D FT
Sbjct: 122 MYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFT 181

Query: 61  FPCVIKACAMLK----DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           +  V+KAC + +     L  G +IH  +L+ GY++   ++ +L+ +YAK      A  +F
Sbjct: 182 YTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVF 241

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACEDSS 174
             M  K + V W+++I+ ++ +   ++AL LF+ M  +    V N+ T V  LQAC   +
Sbjct: 242 CAMPTK-NFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLA 300

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  IH   ++   +  + V NALI MY RCG++     V   ++ +D VSWNS+++
Sbjct: 301 ALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLIS 360

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            +  +    KA+Q F  +   G  P  +  +  + A    G +  GK L      +  +S
Sbjct: 361 IYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILF-----ESMLS 415

Query: 295 DLQIGNTLMDMYAKCCCVNYMGR 317
             +I +  M+ YA  C V+ +GR
Sbjct: 416 KYRI-HPGMEHYA--CMVDLLGR 435


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/719 (35%), Positives = 409/719 (56%), Gaps = 60/719 (8%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +V ++ S++  YS      + + ++ +MQ  G+  +A+ +   ++     S  T G+  H
Sbjct: 64  NVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIK-----SAGTGGIGFH 118

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN--KDSVSWNSMLTGFVQNDL 241
           A  +K G     +V NA+I MYAR G +  A  V  ++ +  +    WN+M++G+ + + 
Sbjct: 119 AHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWES 178

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A   F          D +   N ++ +                              
Sbjct: 179 EGQAQWLF----------DVMPERNVITWTA----------------------------- 199

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++  YAK   +    R F  M  +  +SW  +++GYAQN    +AL LF  +   G++ D
Sbjct: 200 MVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPD 259

Query: 362 VMIIGSVLMACS--GLKCM--SQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
                +V+ ACS  G  C+  S  + +H   I+    +  +  A++D+Y K G++D +R 
Sbjct: 260 ETTWVTVISACSSRGDPCLAASLVRTLHQKRIQL---NCFVRTALLDMYAKFGDLDSARK 316

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN-VESDSITLVSALSAASSLS 476
           +F ++  ++VV+W SMI+ Y  NG +  A+ELF  M  A  +  D +T+VS +SA   L 
Sbjct: 317 LFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLG 376

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L+ G  +  F+      L  S  ++++ MY+RCG+++ A +VF  + T+D++ + ++I+
Sbjct: 377 ALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLIS 436

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
               HG G  AI+L   M+     PD +TF+ +L ACSH+GL+ EG+K  E ++     D
Sbjct: 437 GFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----D 491

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  +HYAC+VDLLGR   LE+A + +  M +EP A V+ +LL A R+H   ELGE+ A K
Sbjct: 492 PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANK 551

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L EL+P N GN++L+SN++A++ +WKDVE++R  M+  G+KKT G SW+E G K+H FI 
Sbjct: 552 LFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIV 611

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D+SH  SD+IY+ L E+ +K+ RE GY+A    VL +VEEEEK +++  HSE+LAI Y 
Sbjct: 612 ADRSHERSDDIYQLLIELRKKM-REAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYA 670

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +L S  G++IR+ KNLRVC DCH+  K++S+L GR ++VRD NRFH F  G+CSC DYW
Sbjct: 671 LLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 267/556 (48%), Gaps = 63/556 (11%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           LF+      VF + +ML  Y    +  +V+  Y +M+  G+  DAF +P +IK+      
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGT--- 112

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-DVVLWNSII 132
              G   H  VLK G+ S  F+ N+++ MYA+      AR++FD + + E  V  WN+++
Sbjct: 113 --GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           S Y       +A  LF  M    ++T                                  
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVIT---------------------------------- 196

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
                  A++  YA+   +  A      +  +  VSWN+ML+G+ QN L  +A++ F E+
Sbjct: 197 -----WTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM 251

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
             AG +PD+   V  +SA    G+      L     ++    +  +   L+DMYAK   +
Sbjct: 252 VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDL 311

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR-TVQLEGLDADVMIIGSVLMA 371
           +   ++F  M  ++ ++W ++IAGYAQN     A+ELF+  +  + L  D + + SV+ A
Sbjct: 312 DSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISA 371

Query: 372 CSGLKCMSQTKEIHGYIIRKGLSDLVIL-----NAIVDVYGKCGNIDYSRNVFESIESKD 426
           C  L  +    E+  +++R    + + L     NA++ +Y +CG+++ ++ VF+ + ++D
Sbjct: 372 CGHLGAL----ELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD 427

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
           VVS+ ++IS +  +G   EA+ L   M E  +E D +T +  L+A S   +L++G+++  
Sbjct: 428 VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE 487

Query: 487 FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR-- 543
            I     +      + +VD+  R G L+ A +    +  +    ++ S++NA+ +H +  
Sbjct: 488 SIKDPAIDH----YACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVE 543

Query: 544 -GKVAIDLFYKMEAES 558
            G++A +  +++E ++
Sbjct: 544 LGELAANKLFELEPDN 559



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 201/434 (46%), Gaps = 64/434 (14%)

Query: 1   MYGKCGSVLDAEQLFDKVS--QRTVFTWNAMLGAYV---SNGEPLRVLETYSRMRVLGIS 55
           MY + G +  A ++FD++   +R V  WNAM+  Y    S G+   + +      V+  +
Sbjct: 139 MYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWT 198

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
                                                     ++V  YAK  D   AR+ 
Sbjct: 199 ------------------------------------------AMVTGYAKVKDLEAARRY 216

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M E+  VV WN+++S Y+ +G   EAL LF EM   G+  +  T+V  + AC     
Sbjct: 217 FDCMPERS-VVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGD 275

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
             L   +     +    L  +V  AL+ MYA+ G +  A  +   +  ++ V+WNSM+ G
Sbjct: 276 PCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAG 335

Query: 236 FVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
           + QN     A++ F+E+  A +  PD+V  V+ +SA G LG L    EL  + ++  F++
Sbjct: 336 YAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGAL----ELGNWVVR--FLT 389

Query: 295 DLQIG------NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           + QI       N ++ MY++C  +    RVF +M  +D +S+ T+I+G+A +   ++A+ 
Sbjct: 390 ENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAIN 449

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGK 408
           L  T++  G++ D +    VL ACS    + + +++   I    +     +   VD+ G+
Sbjct: 450 LMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYACM---VDLLGR 506

Query: 409 CGNIDYSRNVFESI 422
            G ++ ++   E +
Sbjct: 507 VGELEDAKRTMERM 520



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 69/134 (51%), Gaps = 4/134 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGS+ DA+++F +++ R V ++N ++  + ++G  +  +   S M+  GI  D  T
Sbjct: 406 MYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVT 465

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC+    L+ G K+   +     D    +V+ L     +  +   A++  +RM 
Sbjct: 466 FIGVLTACSHAGLLEEGRKVFESIKDPAIDHYACMVDLL----GRVGELEDAKRTMERMP 521

Query: 121 EKEDVVLWNSIISA 134
            +    ++ S+++A
Sbjct: 522 MEPHAGVYGSLLNA 535



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 48/253 (18%), Positives = 99/253 (39%), Gaps = 27/253 (10%)

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           Y+  +F S  + +V  +TSM+  Y H     + + ++  M    V  D+      + +A 
Sbjct: 52  YTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG 111

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ--TKDLILW 531
           +      G   +  +++ G   +  V ++++DMYAR G +  A KVF+ +    + +  W
Sbjct: 112 T-----GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADW 166

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            +M++              ++K E+E  A      +      + + ++    K  ++   
Sbjct: 167 NAMVSG-------------YWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAA 213

Query: 592 DYQLDPWPEH----YACLVDLLGRANHLEEAYQFVRSM---QIEPTAEVWCALLGACRVH 644
               D  PE     +  ++    +    EEA +    M    IEP    W  ++ AC   
Sbjct: 214 RRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSR 273

Query: 645 SNKELGEIVAKKL 657
            +  L   + + L
Sbjct: 274 GDPCLAASLVRTL 286


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/630 (38%), Positives = 375/630 (59%), Gaps = 10/630 (1%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           ARQ+F  M  K  +  WN+++ + S   Q  E L  F  M R     + +T   AL+AC 
Sbjct: 13  ARQMFGEM-TKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71

Query: 172 DSSFETLGMEIHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           +      G  IH    K    G +L  YV ++LI MY +CG+M EA  +  +LE  D V+
Sbjct: 72  ELREVNYGEMIHGFVKKDVTLGSDL--YVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           W+SM++GF +N    +A++FFR +  A    PD+V  +  VSA  +L N   G+ +H + 
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           I++GF +DL + N+L++ YAK         +F  +  +D ISW+T+IA Y QN    +AL
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVY 406
            +F  +  +G + +V  +  VL AC+    + Q ++ H   IRKGL +++ +  A+VD+Y
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN-EANVESDSITL 465
            KC + + +  VF  I  KDVVSW ++IS +  NG+A+ ++E F +M  E N   D+I +
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
           V  L + S L  L++ K  + ++I+ GF+    + +SLV++Y+RCG+L  A+KVFN +  
Sbjct: 370 VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL 429

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKK 584
           KD ++WTS+I   G+HG+G  A++ F  M ++    P+ +TFL++L ACSH+GLI+EG +
Sbjct: 430 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLR 489

Query: 585 FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
             ++M  DY+L P  EHYA LVDLLGR   L+ A +  + M   PT ++   LLGACR+H
Sbjct: 490 IFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIH 549

Query: 645 SNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSW 704
            N E+ E VAKKL EL+  + G Y+L+SNV+    +W++VE++R  ++  G+KK    S 
Sbjct: 550 QNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESL 609

Query: 705 IEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
           IEI  K+H F+A D+ H E + +Y  L E+
Sbjct: 610 IEIRRKVHRFVADDELHPEKEPVYGLLKEL 639



 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 277/524 (52%), Gaps = 11/524 (2%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           K  S +DA Q+F ++++R+++ WN +L +     +   VL  +S M       D FT P 
Sbjct: 6   KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEK 122
            +KAC  L++++ G  IHG V K     +D  V +SL+ MY KC    +A ++FD + EK
Sbjct: 66  ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL-EK 124

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGME 181
            D+V W+S++S +  +G   +A+  FR M     VT +  T +  + AC   S   LG  
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   ++ G +  + + N+L+  YA+     EA  +   +  KD +SW++++  +VQN  
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  F ++   G +P+    +  + A     +L  G++ H  AI++G  +++++   
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GLDA 360
           L+DMY KC        VF ++  +D +SW  +I+G+  N    +++E F  + LE     
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D +++  VL +CS L  + Q K  H Y+I+ G  S+  I  ++V++Y +CG++  +  VF
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSLSIL 478
             I  KD V WTS+I+ Y  +G   +ALE F +++  + V+ + +T +S LSA S   ++
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484

Query: 479 KKGKELNGFII---RKGFNLEGSVASSLVDMYARCGALDIANKV 519
            +G  +   ++   R   NLE      LVD+  R G LD A ++
Sbjct: 485 HEGLRIFKLMVNDYRLAPNLEHYAV--LVDLLGRVGDLDTAIEI 526



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 222/418 (53%), Gaps = 6/418 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           MY KCG +++A ++FD++ +  + TW++M+  +  NG P + +E + RM +   ++ D  
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++ AC  L +   G  +HG V++ G+ +   +VNSL+  YAK   F++A  LF  +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK DV+ W+++I+ Y  +G   EAL +F +M   G   N  T +  LQAC  +     G
Sbjct: 225 AEK-DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG 283

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            + H   ++ G   +V V+ AL+ MY +C    EA  V  ++  KD VSW ++++GF  N
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 343

Query: 240 DLYCKAMQFFR-ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            +  ++++ F   L     +PD +  V  + +   LG L   K  H+Y IK GF S+  I
Sbjct: 344 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 403

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEG 357
           G +L+++Y++C  +    +VF  +  +D + WT++I GY  +    KALE F   V+   
Sbjct: 404 GASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE 463

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNID 413
           +  + +   S+L ACS    + +   I   ++   +   +L     +VD+ G+ G++D
Sbjct: 464 VKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 521


>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 824

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/769 (33%), Positives = 418/769 (54%), Gaps = 22/769 (2%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG--ISVDAFTFPCVIKAC 68
           A QLFD + + T   WN ++  ++ N  P   L  YSRM+        DA+T+   +KAC
Sbjct: 58  ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKAC 117

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC----------YDFRKARQLFDR 118
           A  K+L  G  +H  +++C  +S+  + NSL+ MY  C          +++   R++FD 
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDN 177

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  +++VV WN++IS Y  +G+  EA   F  M R+ +  +  +FV    A   S     
Sbjct: 178 M-RRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKK 236

Query: 179 GMEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
               +   +K G      ++V ++ I+MYA  G +  +  V      ++   WN+M+  +
Sbjct: 237 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVY 296

Query: 237 VQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           VQND   ++++ F E  G+ +   D+V  + A SA   L  +  G++ H +  K      
Sbjct: 297 VQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELP 356

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + I N+LM MY++C  V     VF+ M  +D +SW T+I+ + QN    + L L   +Q 
Sbjct: 357 IVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 416

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYS 415
           +G   D + + ++L A S L+     K+ HG++IR+G+    + + ++D+Y K G I  S
Sbjct: 417 QGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEGMNSYLIDMYAKSGLIRIS 476

Query: 416 RNVFES--IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           + +FE      +D  +W SMIS Y  NG   E   +F  M E N+  +++T+ S L A S
Sbjct: 477 QKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACS 536

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            +  +  GK+L+GF IR+  +    VAS+LVDMY++ GA+  A  +F+  + ++ + +T+
Sbjct: 537 QVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTT 596

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           MI   G HG G+ AI LF  M+     PD I F+A+L ACS+SGL++EG K  E MR  Y
Sbjct: 597 MILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFEDMREVY 656

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT-AEVWCALLGACRVHSNKELGEI 652
            + P  EHY C+ D+LGR   + EAY+FV+ +  E   AE+W +LLG+CR+H   EL E 
Sbjct: 657 NIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCRLHGELELAET 716

Query: 653 VAKKLLELDPGN--PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
           V+++L +LD G    G  VL+SN++A  + WK V++VR  MR  GLKK  G S IE+   
Sbjct: 717 VSERLAKLDKGKNFSGYEVLLSNMYAEEQNWKSVDRVRKGMREKGLKKEVGRSGIEVAGH 776

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           ++ F++RD+ H  S EIY  +  + + + R   ++     V  ++E +E
Sbjct: 777 VNCFVSRDQEHPHSGEIYDAIDGLAKNM-RGDSFLTTLPIVTPSLELDE 824



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 230/455 (50%), Gaps = 33/455 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG---ISVD 57
           MY + G +  + ++FD   +R +  WN M+G YV N   +  +E +  +  +G   I  D
Sbjct: 264 MYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF--LEAIGSKEIVSD 321

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             TF     A + L+ ++ G + HG V K   +    I+NSL+ MY++C   +K+  +F 
Sbjct: 322 EVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFH 381

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            M E+ DVV WN++ISA+  +G   E L L  EMQ+ G   +  T  A L A  +   + 
Sbjct: 382 SMRER-DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKE 440

Query: 178 LGMEIHAATVKSGQNLQVYVANA-LIAMYARCG------KMTEAAGVLYQLENKDSVSWN 230
           +G + H   ++ G  +Q    N+ LI MYA+ G      K+ E +G       +D  +WN
Sbjct: 441 IGKQTHGFLIRQG--IQFEGMNSYLIDMYAKSGLIRISQKLFEGSG----YAERDQATWN 494

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           SM++G+ QN    +    FR++     +P+ V   + + A  ++G++  GK+LH ++I+Q
Sbjct: 495 SMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQ 554

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
               ++ + + L+DMY+K   + Y   +F Q   ++ +++TT+I GY Q+    +A+ LF
Sbjct: 555 YLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLF 614

Query: 351 RTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIV 403
            ++Q  G+  D +   +VL ACS       GLK     +E+  Y I+           I 
Sbjct: 615 LSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFEDMREV--YNIQPSSEHYC---CIT 669

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVS--WTSMISS 436
           D+ G+ G ++ +    + +  +  ++  W S++ S
Sbjct: 670 DMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGS 704



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 141/329 (42%), Gaps = 50/329 (15%)

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN--VESDSITLVS 467
           GN   +R +F++I     V W ++I  ++ N L +EAL  +  M +     + D+ T  S
Sbjct: 53  GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSS 112

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC----GA------LDIAN 517
            L A +    LK GK ++  +IR   N    V +SL++MY  C    G+       D+  
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVR 172

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           KVF+ ++ K+++ W ++I+     GR   A   F  M      P  ++F+ +  A + S 
Sbjct: 173 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSR 232

Query: 578 LINEGKKFLEIMRC---DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
            I +   F  +M     +Y  D +    A  + +      LE + +   S  +E   EVW
Sbjct: 233 SIKKANVFYGLMLKLGDEYVKDLFVVSSA--ISMYAELGDLESSRRVFDSC-VERNIEVW 289

Query: 635 CALLGA-----CRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
             ++G      C V S +   E +  K +  D         ++ + AAS           
Sbjct: 290 NTMIGVYVQNDCLVESIELFLEAIGSKEIVSDE--------VTFLLAASAV--------- 332

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
               SGL++      +E+G + H F++++
Sbjct: 333 ----SGLQQ------VELGRQFHGFVSKN 351


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/788 (32%), Positives = 398/788 (50%), Gaps = 113/788 (14%)

Query: 160 AYTFVAALQAC--EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           A  + A LQ C   +    ++   +HA  + SG   + Y+ N LI +Y +   +  A  +
Sbjct: 13  ANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHL 72

Query: 218 LYQLEN---------------------------------KDSVSWNSMLTGFVQNDLYCK 244
             ++                                   +D+V +N+M+TG+  N+    
Sbjct: 73  FDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFG 132

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRL-GNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           A++ FR+L   G +PD     + + A   +  +    +++H   +K G      + N L+
Sbjct: 133 AIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALL 192

Query: 304 DMYAKCCCVNYMG---------RVFYQMTAQDFISWTTIIAGYAQNN------------- 341
            ++ KC     +          ++F +MT +D +SWTT+IAGY +N              
Sbjct: 193 SVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMT 252

Query: 342 ------------------CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
                               L+ALE+FR + L G+  D     SVL AC+        K+
Sbjct: 253 EKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQ 312

Query: 384 IHGYIIRKGLSD-----LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
           +H YI+R          L + NA+  +Y KCG +D +R VF  +  KD+VSW +++S YV
Sbjct: 313 VHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYV 372

Query: 439 H-------------------------------NGLANEALELFYLMNEANVESDSITLVS 467
           +                               NG   E+L+LF  M     E        
Sbjct: 373 NAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAG 432

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
           A+ A + L+ L  G++L+  ++R GF+   S  ++L+ MYA+CG ++ A+ +F  +   D
Sbjct: 433 AIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLD 492

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
            + W +MI A G HG G  A++LF  M  E   PD ITFL +L  CSH+GL+ EG ++ +
Sbjct: 493 SVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFK 552

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
            M   Y + P  +HYA ++DLL RA    EA   + +M +EP   +W ALL  CR+H N 
Sbjct: 553 SMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNM 612

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           +LG   A++L EL P + G YVL+SN++A   +W DV +VR  MR  G+KK PG SWIE+
Sbjct: 613 DLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEV 672

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGH 767
            NK+H F+  D  H E   +Y  L E+  K+ R+ GY+  T+FVLH++E E+K  +L  H
Sbjct: 673 ENKVHVFLVDDIVHPEVQAVYNYLEELGLKM-RKLGYIPDTKFVLHDMESEQKEYVLSTH 731

Query: 768 SERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
           SE+LA+ +G+LK   G+ +R+ KNLR+C DCH+  K +S++  RE+VVRD  RFHHF+ G
Sbjct: 732 SEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNG 791

Query: 828 VCSCGDYW 835
            CSCG+YW
Sbjct: 792 ECSCGNYW 799



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/586 (23%), Positives = 252/586 (43%), Gaps = 123/586 (20%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE---------------- 123
           +H  ++  G+    +I+N L+ +Y K  D   A  LFD + + +                
Sbjct: 37  VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGN 96

Query: 124 ----------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
                           D V +N++I+ YS +     A+ LFR++ R G   + +TF + L
Sbjct: 97  SNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL 156

Query: 168 QA----CEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC--------------- 208
            A     ED   E    +IH A VKSG      V NAL++++ +C               
Sbjct: 157 GALALIVED---EKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAA 213

Query: 209 -------------------------GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
                                    G++  A   L  +  K  V+WN+M++G+V +  + 
Sbjct: 214 RKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFL 273

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI----KQGFVSDLQIG 299
           +A++ FR++   G + D+    + +SA    G  L+GK++HAY +    +      L + 
Sbjct: 274 EALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVN 333

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY---------------------- 337
           N L  +Y KC  V+   +VF QM  +D +SW  I++GY                      
Sbjct: 334 NALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLL 393

Query: 338 ---------AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
                    AQN    ++L+LF  ++ EG +         ++AC+ L  +   +++H  +
Sbjct: 394 TWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQL 453

Query: 389 IRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           +R G  S L   NA++ +Y KCG ++ +  +F ++   D VSW +MI++   +G   +AL
Sbjct: 454 VRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQAL 513

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKG----KELNGFIIRKGFNLEGSVASSL 503
           ELF LM + ++  D IT ++ LS  S   ++++G    K ++G     G        + +
Sbjct: 514 ELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLY---GICPGEDHYARM 570

Query: 504 VDMYARCGALDIANKVFNCVQTKD-LILWTSMINANGLHGRGKVAI 548
           +D+  R G    A  +   +  +    +W +++    +HG   + I
Sbjct: 571 IDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGI 616



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 196/428 (45%), Gaps = 75/428 (17%)

Query: 21  RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML-KDLDCGAK 79
           R    +NAM+  Y  N +    +E +  +   G   D FTF  V+ A A++ +D     +
Sbjct: 112 RDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQ 171

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKC---------YDFRKARQLFDRMGEKED------ 124
           IH  V+K G      ++N+L++++ KC              AR+LFD M E+++      
Sbjct: 172 IHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTM 231

Query: 125 ------------------------VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
                                   VV WN++IS Y   G  LEAL +FR+M  +G+  + 
Sbjct: 232 IAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDE 291

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQ----NLQVYVANALIAMYARCGKMTEAAG 216
           +T+ + L AC ++ F   G ++HA  +++      +  + V NAL  +Y +CGK+ EA  
Sbjct: 292 FTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQ 351

Query: 217 VLYQLENKDSVSWNSMLTGFV-------------------------------QNDLYCKA 245
           V  Q+  KD VSWN++L+G+V                               QN    ++
Sbjct: 352 VFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEES 411

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           ++ F  ++  G +P       A+ A   L  L++G++LHA  ++ GF S L  GN L+ M
Sbjct: 412 LKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITM 471

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
           YAKC  V     +F  M   D +SW  +IA   Q+    +ALELF  +  E +  D +  
Sbjct: 472 YAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITF 531

Query: 366 GSVLMACS 373
            +VL  CS
Sbjct: 532 LTVLSTCS 539



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 145/309 (46%), Gaps = 36/309 (11%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +  A Q  D ++++ V  WNAM+  YV +G  L  LE + +M +LGI  D FT+
Sbjct: 235 YVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTY 294

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDF---IVNSLVAMYAKCYDFRKARQLFD 117
             V+ ACA       G ++H  +L+     S DF   + N+L  +Y KC    +ARQ+F+
Sbjct: 295 TSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFN 354

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA----------------- 160
           +M  K D+V WN+I+S Y  +G+  EA   F EM    L+T                   
Sbjct: 355 QMPVK-DLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLK 413

Query: 161 --------------YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
                         Y F  A+ AC   +    G ++HA  V+ G +  +   NALI MYA
Sbjct: 414 LFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYA 473

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +CG +  A  +   +   DSVSWN+M+    Q+    +A++ F  +      PD++  + 
Sbjct: 474 KCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLT 533

Query: 267 AVSASGRLG 275
            +S     G
Sbjct: 534 VLSTCSHAG 542



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 110/247 (44%), Gaps = 25/247 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G + +A+  F+++ +R + TW  M+     NG     L+ ++RM+  G     + F
Sbjct: 371 YVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAF 430

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              I ACA L  L  G ++H  +++ G+DS+    N+L+ MYAKC     A  LF  M  
Sbjct: 431 AGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTM-P 489

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D V WN++I+A    G   +AL LF  M +  ++ +  TF+  L  C           
Sbjct: 490 YLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCS---------- 539

Query: 182 IHAATVKSGQNLQVYVAN------------ALIAMYARCGKMTEAAGVLYQLENKDSVS- 228
            HA  V+ G      ++              +I +  R GK +EA  ++  +  +     
Sbjct: 540 -HAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPI 598

Query: 229 WNSMLTG 235
           W ++L G
Sbjct: 599 WEALLAG 605



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 9/139 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  A  LF  +      +WNAM+ A   +G   + LE +  M    I  D  T
Sbjct: 471 MYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRIT 530

Query: 61  FPCVIKACAMLKDLDCGAK----IHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           F  V+  C+    ++ G +    + GL   C G D    +++ L     +   F +A+ +
Sbjct: 531 FLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLL----CRAGKFSEAKDM 586

Query: 116 FDRMGEKEDVVLWNSIISA 134
            + M  +    +W ++++ 
Sbjct: 587 IETMPVEPGPPIWEALLAG 605


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/690 (34%), Positives = 387/690 (56%), Gaps = 37/690 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAM--YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IH+ T+K G +        +IA       GKM  A  V   +       WN+M+ G+ +
Sbjct: 25  QIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSR 84

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            +     +  +  +  +  KPD+      +    R   L  GK L  +A+K GF S+L +
Sbjct: 85  INHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFV 144

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
               + M++ C  V+   +VF    A + ++W  +++GY +     K+  LF  ++  G+
Sbjct: 145 QKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGV 204

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSR 416
             + + +  +L ACS LK +   K I+ YI   G+   +L++ N ++D++  CG +D ++
Sbjct: 205 SPNSVTLVLMLSACSKLKDLEGGKHIYKYI-NGGIVERNLILENVLIDMFAACGEMDEAQ 263

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLAN-------------------------------E 445
           +VF++++++DV+SWTS+++ + + G  +                               E
Sbjct: 264 SVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIE 323

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL LF  M  +NV+ D  T+VS L+A + L  L+ G+ +  +I +     +  V ++L+D
Sbjct: 324 ALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALID 383

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY +CG +  A KVF  +  KD   WT+MI    ++G G+ A+ +F  M   S  PD IT
Sbjct: 384 MYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEIT 443

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           ++ +L AC+H+G++ +G+ F   M   + + P   HY C+VDLLGRA  LEEA++ + +M
Sbjct: 444 YIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNM 503

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
            ++P + VW +LLGACRVH N +L E+ AK++LEL+P N   YVL+ N++AA ++W+++ 
Sbjct: 504 PVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLR 563

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
           QVR  M   G+KKTPG S +E+   ++ F+A D+SH +S EIY KL  + + L +  GY 
Sbjct: 564 QVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIK-AGYS 622

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
             T  V  ++ EE+K   LY HSE+LAIAY ++ S  G  IRI KNLR+CVDCH   KLV
Sbjct: 623 PDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLV 682

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S  + REL+VRD  RFHHF  G CSC ++W
Sbjct: 683 SEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 218/476 (45%), Gaps = 57/476 (11%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G ++ A Q+FD + Q T+F WN M+  Y     P   +  Y  M    I  D FTFP ++
Sbjct: 55  GKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLL 114

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           K       L  G  +    +K G+DS  F+  + + M++ C     AR++FD MG+  +V
Sbjct: 115 KGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFD-MGDAWEV 173

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V WN ++S Y+   Q  ++  LF EM++ G+  N+ T V  L AC        G  I+  
Sbjct: 174 VTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKY 233

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV---QNDL- 241
                    + + N LI M+A CG+M EA  V   ++N+D +SW S++TGF    Q DL 
Sbjct: 234 INGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLA 293

Query: 242 ---------------------------YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
                                      + +A+  FRE+Q +  KPD+   V+ ++A   L
Sbjct: 294 RKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHL 353

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G L  G+ +  Y  K    +D  +GN L+DMY KC  V    +VF +M  +D  +WT +I
Sbjct: 354 GALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMI 413

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
            G A N    +AL +F  +    +  D +    VL AC+           H  ++ KG S
Sbjct: 414 VGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACT-----------HAGMVEKGQS 462

Query: 395 DLVILNA-------------IVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
             + +               +VD+ G+ G ++ +  V  ++  K + + W S++ +
Sbjct: 463 FFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGA 518



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 244/509 (47%), Gaps = 45/509 (8%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK---ARQLFDRMGEKEDVVLWNSIISAY 135
           +IH   +K G  S+D +    V  +   ++  K   ARQ+FD + +   + +WN++I  Y
Sbjct: 25  QIHSHTIKMGL-SSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQP-TLFIWNTMIKGY 82

Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
           S        + ++  M    +  + +TF   L+    +     G  +    VK G +  +
Sbjct: 83  SRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNL 142

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           +V  A I M++ C  +  A  V    +  + V+WN ML+G+ +   + K+   F E++  
Sbjct: 143 FVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKR 202

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS-DLQIGNTLMDMYAKCCCVNY 314
           G  P+ V  V  +SA  +L +L  GK ++ Y I  G V  +L + N L+DM+A C  ++ 
Sbjct: 203 GVSPNSVTLVLMLSACSKLKDLEGGKHIYKY-INGGIVERNLILENVLIDMFAACGEMDE 261

Query: 315 MGRVFYQMTAQDFISWTTIIAGYA-------------------------------QNNCH 343
              VF  M  +D ISWT+I+ G+A                               + N  
Sbjct: 262 AQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRF 321

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAI 402
           ++AL LFR +Q+  +  D   + S+L AC+ L  +   + +  YI +  + +D  + NA+
Sbjct: 322 IEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNAL 381

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +D+Y KCGN+  ++ VF+ +  KD  +WT+MI     NG   EAL +F  M EA++  D 
Sbjct: 382 IDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDE 441

Query: 463 ITLVSALSAASSLSILKKGKELNGFI---IRKGFNLEGSVASSLVDMYARCGALDIANKV 519
           IT +  L A +   +++KG+    FI   ++ G     +    +VD+  R G L+ A++V
Sbjct: 442 ITYIGVLCACTHAGMVEKGQSF--FISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEV 499

Query: 520 F-NCVQTKDLILWTSMINANGLHGRGKVA 547
             N     + I+W S++ A  +H   ++A
Sbjct: 500 IVNMPVKPNSIVWGSLLGACRVHKNVQLA 528



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 111/503 (22%), Positives = 218/503 (43%), Gaps = 57/503 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+  C  V  A ++FD      V TWN ML  Y    +  +    +  M   G+S ++ T
Sbjct: 151 MFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVT 210

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ AC+ LKDL+ G  I+  +     +    + N L+ M+A C +  +A+ +FD M 
Sbjct: 211 LVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMK 270

Query: 121 EKEDVVLWNSIISAYSASGQC-------------------------------LEALGLFR 149
            + DV+ W SI++ ++  GQ                                +EAL LFR
Sbjct: 271 NR-DVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFR 329

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EMQ   +  + +T V+ L AC       LG  +     K+      +V NALI MY +CG
Sbjct: 330 EMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCG 389

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + +A  V  ++ +KD  +W +M+ G   N    +A+  F  +  A   PD++  +  + 
Sbjct: 390 NVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLC 449

Query: 270 ASGRLGNLLNGKELH-AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DF 327
           A    G +  G+    +  ++ G   ++     ++D+  +   +     V   M  + + 
Sbjct: 450 ACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNS 509

Query: 328 ISWTTII-AGYAQNNCHLKALELFRTVQLEGLDADV-MIIGSVLMACSGLKCMSQTKEIH 385
           I W +++ A     N  L  +   + ++LE  +  V +++ ++  AC   + + Q +++ 
Sbjct: 510 IVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKL- 568

Query: 386 GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI-------ESKDVVS-WTSMISSY 437
             ++ +G+               C  ++ + NV+E +       +SK++ +   +M+   
Sbjct: 569 --MMERGIKKT----------PGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDL 616

Query: 438 VHNGLANEALELFYLMNEANVES 460
           +  G + +  E+F  + E + E+
Sbjct: 617 IKAGYSPDTSEVFLDLGEEDKET 639



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 157/347 (45%), Gaps = 54/347 (15%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS------WTTII 334
           K++H++ IK G  SD      ++      CC +  G++ Y     D I       W T+I
Sbjct: 24  KQIHSHTIKMGLSSDPLFQKRVIAF----CCAHESGKMIYARQVFDAIPQPTLFIWNTMI 79

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL- 393
            GY++ N     + ++  +    +  D      +L   +    +   K +  + ++ G  
Sbjct: 80  KGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFD 139

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
           S+L +  A + ++  C  +D +R VF+  ++ +VV+W  M+S Y       ++  LF  M
Sbjct: 140 SNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEM 199

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKE----LNGFIIRKGFNLEGSVASSLVDMYAR 509
            +  V  +S+TLV  LSA S L  L+ GK     +NG I+ +   LE    + L+DM+A 
Sbjct: 200 EKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILE----NVLIDMFAA 255

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV----------------------- 546
           CG +D A  VF+ ++ +D+I WTS++   G    G++                       
Sbjct: 256 CGEMDEAQSVFDNMKNRDVISWTSIV--TGFANIGQIDLARKYFDQIPERDYVSWTAMID 313

Query: 547 ----------AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
                     A+ LF +M+  +  PD  T +++L AC+H G +  G+
Sbjct: 314 GYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGE 360



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 6/220 (2%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVY---GKCGNIDYSRNVFESIE 423
           S+L  C   K M Q K+IH + I+ GLS   +    V  +    + G + Y+R VF++I 
Sbjct: 12  SLLEKC---KSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
              +  W +MI  Y         + ++ LM  +N++ D  T    L   +    L+ GK 
Sbjct: 69  QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           L    ++ GF+    V  + + M++ C  +D+A KVF+     +++ W  M++      +
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQ 188

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
            K +  LF +ME    +P+ +T + +L ACS    +  GK
Sbjct: 189 FKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGK 228


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/664 (35%), Positives = 382/664 (57%), Gaps = 9/664 (1%)

Query: 178 LGMEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           LG  +HA  VK+       ++AN LI MY++      A  VL     ++ VSW S+++G 
Sbjct: 24  LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            QN  +  A+  F E++  G  P+      A  A   L   + GK++HA A+K G + D+
Sbjct: 84  AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +G +  DMY K    +   ++F ++  ++  +W   I+    +    +A+E F  ++  
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF--IEFR 201

Query: 357 GLD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
            +D   + +   + L ACS    ++   ++HG ++R G  +D+ + N ++D YGKC  I 
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            S  +F  + +K+ VSW S++++YV N    +A  L+    +  VE+    + S LSA +
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            ++ L+ G+ ++   ++        V S+LVDMY +CG ++ + + F+ +  K+L+   S
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381

Query: 534 MINANGLHGRGKVAIDLFYKMEAES--FAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
           +I      G+  +A+ LF +M        P+++TF++LL ACS +G +  G K  + MR 
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
            Y ++P  EHY+C+VD+LGRA  +E AY+F++ M I+PT  VW AL  ACR+H   +LG 
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
           + A+ L +LDP + GN+VL+SN FAA+ +W +   VR  ++G G+KK  G SWI + N++
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQV 561

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
           H+F A+D+SH  + EI   LA++  ++E   GY    +  L+++EEEEK   +  HSE+L
Sbjct: 562 HAFQAKDRSHILNKEIQTTLAKLRNEME-AAGYKPDLKLSLYDLEEEEKAAEVSHHSEKL 620

Query: 772 AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           A+A+G+L       IRITKNLR+C DCHSF K VS    RE++VRD NRFH F+ G+CSC
Sbjct: 621 ALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSC 680

Query: 832 GDYW 835
            DYW
Sbjct: 681 KDYW 684



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 256/514 (49%), Gaps = 14/514 (2%)

Query: 54  ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKA 112
           +S DA     ++K       +  G  +H  ++K        F+ N L+ MY+K  D  ++
Sbjct: 4   LSADALGL--LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSK-LDHPES 60

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
            +L  R+    +VV W S+IS  + +G    AL  F EM+R G+V N +TF  A +A   
Sbjct: 61  ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 120

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
                 G +IHA  VK G+ L V+V  +   MY +     +A  +  ++  ++  +WN+ 
Sbjct: 121 LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAF 180

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           ++  V +    +A++ F E +     P+ +     ++A     +L  G +LH   ++ GF
Sbjct: 181 ISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF 240

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            +D+ + N L+D Y KC  +     +F +M  ++ +SW +++A Y QN+   KA  L+  
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 300

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGN 411
            + + ++    +I SVL AC+G+  +   + IH + ++  +   + + +A+VD+YGKCG 
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE--ANVESDSITLVSAL 469
           I+ S   F+ +  K++V+  S+I  Y H G  + AL LF  M         + +T VS L
Sbjct: 361 IEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLL 420

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD 527
           SA S    ++ G ++    +R  + +E      S +VDM  R G ++ A +    +  + 
Sbjct: 421 SACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQP 479

Query: 528 LI-LWTSMINANGLHGR---GKVAIDLFYKMEAE 557
            I +W ++ NA  +HG+   G +A +  +K++ +
Sbjct: 480 TISVWGALQNACRMHGKPQLGLLAAENLFKLDPK 513



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 237/508 (46%), Gaps = 25/508 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K      A  +      R V +W +++     NG     L  +  MR  G+  + FT
Sbjct: 51  MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 110

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPC  KA A L+    G +IH L +KCG     F+  S   MY K      AR+LFD + 
Sbjct: 111 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 170

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ ++  WN+ IS     G+  EA+  F E +R+    N+ TF A L AC D     LGM
Sbjct: 171 ER-NLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 229

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   ++SG +  V V N LI  Y +C ++  +  +  ++  K++VSW S++  +VQN 
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 289

Query: 241 LYCKA-MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              KA + + R  +   +  D + + + +SA   +  L  G+ +HA+A+K      + +G
Sbjct: 290 EDEKASVLYLRSRKDIVETSDFMIS-SVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE--G 357
           + L+DMY KC C+    + F +M  ++ ++  ++I GYA       AL LF  +     G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
              + M   S+L ACS       G+K     +  +G  I  G       + IVD+ G+ G
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG--IEPGAEH---YSCIVDMLGRAG 463

Query: 411 NIDYSRNVFESIESKDVVS-WTSMISSYVHNGLANEAL----ELFYLMNEANVESDSITL 465
            ++ +    + +  +  +S W ++ ++   +G     L     LF L  +     + + L
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKL--DPKDSGNHVLL 521

Query: 466 VSALSAASSLSILKKGK-ELNGFIIRKG 492
            +  +AA   +     + EL G  I+KG
Sbjct: 522 SNTFAAAGRWAEANTVREELKGVGIKKG 549


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 220/568 (38%), Positives = 347/568 (61%), Gaps = 3/568 (0%)

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           ++A  R  +L + + +HA+     F   + + N+L+ +Y KC  V    RVF  M A+D 
Sbjct: 71  ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
            SWT++IAGYAQN+   +AL L   +       +     S+L A          ++IH  
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190

Query: 388 IIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            ++    D V + +A++D+Y +CG +D +  VF+ +ESK+ VSW ++I+ +   G     
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L +F  M     E+   T  S  SA + +  L++GK ++  +I+ G  L   V ++++DM
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDM 310

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           YA+ G++  A KVF+ V  KD++ W SM+ A   +G G+ A+  F +M       + ITF
Sbjct: 311 YAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITF 370

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           L++L ACSH GL+ EGK++ ++M+ +Y L+P  +HY  +VDLLGRA  L +A  F+  M 
Sbjct: 371 LSILTACSHGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           ++PTA VW ALLG+CR+H N ++G+  A  + ELDP + G  VL+ N++A++ +W    +
Sbjct: 430 MKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAAR 489

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR  M+ +G+KK P  SW+EI N +H F+A D +H  S+EIYKK  EI+ ++ R+ GYV 
Sbjct: 490 VRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQI-RKAGYVP 548

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
            T +VL +V+E+E+   L  HSE++A+A+ ++    G+ IRI KN+R+C DCHS  + +S
Sbjct: 549 NTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYIS 608

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDY 834
           ++F RE+VVRD NRFHHF +G CSCGDY
Sbjct: 609 KVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 192/375 (51%), Gaps = 3/375 (0%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +I ACA  + LD    IH  +    +  + F+ NSL+ +Y KC     AR++FD M  + 
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR- 128

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D+  W S+I+ Y+ +    EALGL   M R     N +TF + L+A   S+   +G +IH
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           A TVK   +  VYV +AL+ MYARCG+M  A  V  QLE+K+ VSWN+++ GF +     
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
             +  F E+Q  G +       +  SA   +G L  GK +HA+ IK G      +GNT++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMYAK   +    +VF ++  +D ++W +++  +AQ     +A+  F  ++  G+  + +
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI-DYSRNVFES 421
              S+L ACS    + + K+    +    L  ++     +VD+ G+ G + D    +F+ 
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKM 428

Query: 422 IESKDVVSWTSMISS 436
                   W +++ S
Sbjct: 429 PMKPTAAVWGALLGS 443



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 146/282 (51%), Gaps = 1/282 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG+V DA ++FD +  R + +W +++  Y  N  P   L     M       + FT
Sbjct: 108 LYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFT 167

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++KA         G +IH L +K  +    ++ ++L+ MYA+C     A  +FD++ 
Sbjct: 168 FASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL- 226

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E ++ V WN++I+ ++  G     L +F EMQR G     +T+ +   A         G 
Sbjct: 227 ESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 286

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KSG+ L  +V N ++ MYA+ G M +A  V  +++ KD V+WNSMLT F Q  
Sbjct: 287 WVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYG 346

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           L  +A+  F E++  G   +Q+  ++ ++A    G +  GK+
Sbjct: 347 LGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ 388



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 127/233 (54%), Gaps = 1/233 (0%)

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCG 410
           +V    L A   +  S++ AC+  + +   + IH ++     +  V L N+++ +Y KCG
Sbjct: 54  SVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCG 113

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            +  +R VF+ + ++D+ SWTS+I+ Y  N + +EAL L   M     + +  T  S L 
Sbjct: 114 AVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLK 173

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           AA + +    G++++   ++  ++ +  V S+L+DMYARCG +D+A  VF+ +++K+ + 
Sbjct: 174 AAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVS 233

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           W ++I      G G+  + +F +M+   F   H T+ ++  A +  G + +GK
Sbjct: 234 WNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 286



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 126/245 (51%), Gaps = 24/245 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG +  A  +FD++  +   +WNA++  +   G+    L  ++ M+  G     FT
Sbjct: 209 MYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFT 268

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V  A A +  L+ G  +H  ++K G   + F+ N+++ MYAK      AR++FDR+ 
Sbjct: 269 YSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRV- 327

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K+DVV WNS+++A++  G   EA+  F EM++ G+  N  TF++ L AC          
Sbjct: 328 DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS--------- 378

Query: 181 EIHAATVKSGQ---------NLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENKDSVS- 228
             H   VK G+         NL+  + +   ++ +  R G + +A   ++++  K + + 
Sbjct: 379 --HGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAV 436

Query: 229 WNSML 233
           W ++L
Sbjct: 437 WGALL 441


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/588 (38%), Positives = 364/588 (61%), Gaps = 3/588 (0%)

Query: 250 RELQGAGQKPDQVCTV-NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           +EL   G +   V  + + + +S R    + G   HA  I+ G  +D    N LM+MY+K
Sbjct: 8   KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSK 67

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  V    ++F +M  +  +SW T++  + QN    KAL LF  +Q EG       + SV
Sbjct: 68  CGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSV 127

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           + AC+   C+ + K++HG+ ++  L S++ +  A++DVY KCG +  +  VFE +  +  
Sbjct: 128 VCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD 187

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           V+W+SM++ YV N L  EAL LF+      +E +  T+ SALSA ++ + L +GK++   
Sbjct: 188 VTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAV 247

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
             + G      V SSL+DMYA+CG ++ A  VF+ V+ K+++LW ++++    H R   A
Sbjct: 248 SCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEA 307

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           +  F KM+     P+ IT++++L ACSH GL+ +G+K+ ++M   + + P   HY+C+VD
Sbjct: 308 MIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVD 367

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
           +LGRA  L EA  F+  M  + TA +W +LL +CR++ N EL E+ AK L E++P N GN
Sbjct: 368 ILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGN 427

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
           +VL+SN++AA+ +W++V + R  ++ S  KK  G SWIEI +K+HSF+  +++H    EI
Sbjct: 428 HVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEI 487

Query: 728 YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIR 787
           Y KL ++  ++ ++ GY A+T+  LH+VEE  K ++L  HSE+LA+ +G++    G+ IR
Sbjct: 488 YLKLEDLVGEM-KKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIR 546

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           I KNLR+C DCHSF KL S +  RE++VRD NRFHHF+ G CSCG++W
Sbjct: 547 IMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 594



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 189/360 (52%), Gaps = 9/360 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  A +LFD++  R++ +WN M+G++  NG+  + L  + +M+  G S   FT
Sbjct: 64  MYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFT 123

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA    +    ++HG  LK   DS  F+  +L+ +YAKC   + A  +F+ M 
Sbjct: 124 VSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMP 183

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DV  W+S+++ Y  +    EAL LF   Q +GL  N +T  +AL AC   +    G 
Sbjct: 184 ERSDVT-WSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK 242

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++ A + K+G    ++V ++LI MYA+CG + EA  V   +E K+ V WN++L+GF ++ 
Sbjct: 243 QVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHV 302

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +AM +F ++Q  G  P+ +  ++ +SA   LG +  G++     I+        + N
Sbjct: 303 RSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIR--------VHN 354

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
              ++    C V+ +GR      A+DFI      A  +     L +  ++R ++L  + A
Sbjct: 355 VSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAA 414



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 195/372 (52%), Gaps = 5/372 (1%)

Query: 149 REMQRVGL-VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           +E+  VG+  T+       LQ+   +     GM  HA  ++ G       +N L+ MY++
Sbjct: 8   KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSK 67

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
           CG +  A  +  ++  +  VSWN+M+    QN    KA+  F ++Q  G    +    + 
Sbjct: 68  CGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSV 127

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           V A      +   K+LH +A+K    S++ +G  L+D+YAKC  V     VF  M  +  
Sbjct: 128 VCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD 187

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           ++W++++AGY QN  + +AL LF   Q  GL+ +   I S L AC+    + + K++   
Sbjct: 188 VTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAV 247

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
             + G+ S++ ++++++D+Y KCG I+ +  VF S+E K+VV W +++S +  +  + EA
Sbjct: 248 SCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEA 307

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLV 504
           +  F  M +  +  + IT +S LSA S L +++KG++    +IR   N+  +V   S +V
Sbjct: 308 MIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRV-HNVSPNVLHYSCMV 366

Query: 505 DMYARCGALDIA 516
           D+  R G L  A
Sbjct: 367 DILGRAGLLHEA 378



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 197/363 (54%), Gaps = 4/363 (1%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G   H  +++ G  +     N L+ MY+KC     AR+LFD M  +  +V WN+++ +++
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVR-SLVSWNTMVGSHT 97

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +G C +AL LF +MQ+ G   + +T  + + AC          ++H   +K+  +  V+
Sbjct: 98  QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 157

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V  AL+ +YA+CG + +A  V   +  +  V+W+SM+ G+VQN+LY +A+  F   Q  G
Sbjct: 158 VGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMG 217

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            + +Q    +A+SA      L+ GK++ A + K G  S++ + ++L+DMYAKC  +    
Sbjct: 218 LEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAY 277

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            VF  +  ++ + W  I++G++++   L+A+  F  +Q  G+  + +   SVL ACS L 
Sbjct: 278 TVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLG 337

Query: 377 CMSQTKEIHGYIIR-KGLSDLVI-LNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSM 433
            + + ++    +IR   +S  V+  + +VD+ G+ G +  +++  + +      S W S+
Sbjct: 338 LVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSL 397

Query: 434 ISS 436
           ++S
Sbjct: 398 LAS 400


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/614 (36%), Positives = 361/614 (58%), Gaps = 12/614 (1%)

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           S SWN  L       L+ +++  +R +  +G  PD       + +   L   ++G++LH 
Sbjct: 15  STSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 74

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ--MTAQDFISWTTIIAGYAQNNCH 343
           + I+ G  ++  +   L+ MY KC  V    +VF +   ++Q  + +  +I+GY  N+  
Sbjct: 75  HVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKV 134

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAI 402
             A  +FR ++  G+  D + I  ++  C+  + +   + +HG  ++ G  S++ +LN+ 
Sbjct: 135 SDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSF 194

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           + +Y KCG+++  R +F+ +  K +++W ++IS Y  NGLA + LELF  M  + V  D 
Sbjct: 195 ITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDP 254

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
            TLVS LS+ + L   K G+E+   +   GF     ++++L+ MYARCG L  A  VF+ 
Sbjct: 255 FTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDI 314

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +  K L+ WT+MI   G+HG G+  + LF  M      PD   F+ +L ACSHSGL ++G
Sbjct: 315 MPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 374

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
            +    M+ +Y+L+P PEHY+CLVDLLGRA  L+EA +F+ SM +EP   VW ALLGAC+
Sbjct: 375 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACK 434

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
           +H N ++ E+   K++E +P N G YVL+SN+++ S+  + + ++R+ MR    +K PG 
Sbjct: 435 IHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 494

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEI-TEKLEREGGYVAQTQFVLHNVEEEEKV 761
           S++E   K+H F+A D+SH +++E+++ L E+ T  +E  G         +     EE  
Sbjct: 495 SYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGN--------MDCDRGEEVS 546

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
                HSERLAIA+G+L S  G+ I + KNLRVC DCH F KLVS++  R  VVRDA+RF
Sbjct: 547 STTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRF 606

Query: 822 HHFEAGVCSCGDYW 835
           H+F+ GVCSC DYW
Sbjct: 607 HYFKDGVCSCKDYW 620



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 201/421 (47%), Gaps = 14/421 (3%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
           +WN  L            +  Y  M   G S DAF+FP ++K+CA L     G ++H  V
Sbjct: 17  SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV-VLWNSIISAYSASGQCLE 143
           ++ G ++  F++ +L++MY KC     AR++F+       + V +N++IS Y+A+ +  +
Sbjct: 77  IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
           A  +FR M+  G+  ++ T +  +  C    +  LG  +H   VK G   +V V N+ I 
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           MY +CG +     +  ++  K  ++WN++++G+ QN L    ++ F +++ +G  PD   
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFT 256

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
            V+ +S+   LG    G+E+       GF  ++ + N L+ MYA+C  +     VF  M 
Sbjct: 257 LVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMP 316

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLK 376
            +  +SWT +I  Y  +      L LF  +   G+  D  +   VL ACS       GL+
Sbjct: 317 VKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 376

Query: 377 CMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMIS 435
                K    Y +  G       + +VD+ G+ G +D +    +S+    D   W +++ 
Sbjct: 377 LFRAMK--REYKLEPGPEH---YSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLG 431

Query: 436 S 436
           +
Sbjct: 432 A 432



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 165/335 (49%), Gaps = 5/335 (1%)

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F + +A    SW   +   A  +   +++ L+R++   G   D      +L +C+ L   
Sbjct: 7   FVRNSAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLP 66

Query: 379 SQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFE--SIESKDVVSWTSMIS 435
              +++H ++IR G  ++  +L A++ +Y KCG ++ +R VFE     S+  V + ++IS
Sbjct: 67  VSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALIS 126

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  N   ++A  +F  M E  V  DS+T++  +   +    L  G+ L+G  ++ G   
Sbjct: 127 GYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYS 186

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           E +V +S + MY +CG+++   ++F+ +  K LI W ++I+    +G     ++LF +M+
Sbjct: 187 EVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMK 246

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
           +    PD  T +++L +C+H G    G++  E++  +    P       L+ +  R  +L
Sbjct: 247 SSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEAN-GFAPNVFLSNALISMYARCGNL 305

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
            +A      M ++     W A++G   +H   E G
Sbjct: 306 AKARAVFDIMPVKSLVS-WTAMIGCYGMHGMGETG 339



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 119/236 (50%), Gaps = 5/236 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV    +LFD++  + + TWNA++  Y  NG    VLE + +M+  G+  D FT
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFT 256

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +CA L     G ++  LV   G+    F+ N+L++MYA+C +  KAR +FD M 
Sbjct: 257 LVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMP 316

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  +V W ++I  Y   G     L LF +M + G+  +   FV  L AC  S     G+
Sbjct: 317 VK-SLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 375

Query: 181 EIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           E+  A +K    L+    +   L+ +  R G++ EA   +  +    D   W ++L
Sbjct: 376 ELFRA-MKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALL 430


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/588 (38%), Positives = 364/588 (61%), Gaps = 3/588 (0%)

Query: 250 RELQGAGQKPDQVCTV-NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           +EL   G +   V  + + + +S R    + G   HA  I+ G  +D    N LM+MY+K
Sbjct: 35  KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSK 94

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  V    ++F +M  +  +SW T++  + QN    KAL LF  +Q EG       + SV
Sbjct: 95  CGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSV 154

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           + AC+   C+ + K++HG+ ++  L S++ +  A++DVY KCG +  +  VFE +  +  
Sbjct: 155 VCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD 214

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           V+W+SM++ YV N L  EAL LF+      +E +  T+ SALSA ++ + L +GK++   
Sbjct: 215 VTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAV 274

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
             + G      V SSL+DMYA+CG ++ A  VF+ V+ K+++LW ++++    H R   A
Sbjct: 275 SCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEA 334

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVD 607
           +  F KM+     P+ IT++++L ACSH GL+ +G+K+ ++M   + + P   HY+C+VD
Sbjct: 335 MIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVD 394

Query: 608 LLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGN 667
           +LGRA  L EA  F+  M  + TA +W +LL +CR++ N EL E+ AK L E++P N GN
Sbjct: 395 ILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGN 454

Query: 668 YVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
           +VL+SN++AA+ +W++V + R  ++ S  KK  G SWIEI +K+HSF+  +++H    EI
Sbjct: 455 HVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEI 514

Query: 728 YKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIR 787
           Y KL ++  ++ ++ GY A+T+  LH+VEE  K ++L  HSE+LA+ +G++    G+ IR
Sbjct: 515 YLKLEDLVGEM-KKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIR 573

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           I KNLR+C DCHSF KL S +  RE++VRD NRFHHF+ G CSCG++W
Sbjct: 574 IMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 621



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 189/360 (52%), Gaps = 9/360 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  A +LFD++  R++ +WN M+G++  NG+  + L  + +M+  G S   FT
Sbjct: 91  MYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFT 150

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA    +    ++HG  LK   DS  F+  +L+ +YAKC   + A  +F+ M 
Sbjct: 151 VSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMP 210

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DV  W+S+++ Y  +    EAL LF   Q +GL  N +T  +AL AC   +    G 
Sbjct: 211 ERSDVT-WSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK 269

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++ A + K+G    ++V ++LI MYA+CG + EA  V   +E K+ V WN++L+GF ++ 
Sbjct: 270 QVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHV 329

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +AM +F ++Q  G  P+ +  ++ +SA   LG +  G++     I+        + N
Sbjct: 330 RSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIR--------VHN 381

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
              ++    C V+ +GR      A+DFI      A  +     L +  ++R ++L  + A
Sbjct: 382 VSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAA 441



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 195/372 (52%), Gaps = 5/372 (1%)

Query: 149 REMQRVGL-VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           +E+  VG+  T+       LQ+   +     GM  HA  ++ G       +N L+ MY++
Sbjct: 35  KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSK 94

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
           CG +  A  +  ++  +  VSWN+M+    QN    KA+  F ++Q  G    +    + 
Sbjct: 95  CGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSV 154

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           V A      +   K+LH +A+K    S++ +G  L+D+YAKC  V     VF  M  +  
Sbjct: 155 VCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD 214

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           ++W++++AGY QN  + +AL LF   Q  GL+ +   I S L AC+    + + K++   
Sbjct: 215 VTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAV 274

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
             + G+ S++ ++++++D+Y KCG I+ +  VF S+E K+VV W +++S +  +  + EA
Sbjct: 275 SCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEA 334

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLV 504
           +  F  M +  +  + IT +S LSA S L +++KG++    +IR   N+  +V   S +V
Sbjct: 335 MIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRV-HNVSPNVLHYSCMV 393

Query: 505 DMYARCGALDIA 516
           D+  R G L  A
Sbjct: 394 DILGRAGLLHEA 405



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 197/363 (54%), Gaps = 4/363 (1%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G   H  +++ G  +     N L+ MY+KC     AR+LFD M  +  +V WN+++ +++
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVR-SLVSWNTMVGSHT 124

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +G C +AL LF +MQ+ G   + +T  + + AC          ++H   +K+  +  V+
Sbjct: 125 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 184

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V  AL+ +YA+CG + +A  V   +  +  V+W+SM+ G+VQN+LY +A+  F   Q  G
Sbjct: 185 VGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMG 244

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            + +Q    +A+SA      L+ GK++ A + K G  S++ + ++L+DMYAKC  +    
Sbjct: 245 LEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAY 304

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            VF  +  ++ + W  I++G++++   L+A+  F  +Q  G+  + +   SVL ACS L 
Sbjct: 305 TVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLG 364

Query: 377 CMSQTKEIHGYIIR-KGLSDLVI-LNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSM 433
            + + ++    +IR   +S  V+  + +VD+ G+ G +  +++  + +      S W S+
Sbjct: 365 LVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSL 424

Query: 434 ISS 436
           ++S
Sbjct: 425 LAS 427


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/566 (39%), Positives = 346/566 (61%), Gaps = 4/566 (0%)

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
            R G ++  K  H   I+     D+ + N L++ Y+KC  V    +VF  M  +  +SW 
Sbjct: 72  ARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWN 131

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS-QTKEIHGYIIR 390
           T+I  Y +N    +AL++F  ++ EG       I SVL AC G+ C + + K++H   ++
Sbjct: 132 TMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC-GVNCDALECKKLHCLSVK 190

Query: 391 KGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
             +  +L +  A++D+Y KCG I  +  VFES++ K  V+W+SM++ YV N    EAL L
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 250

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           +      ++E +  TL S + A S+L+ L +GK+++  I + GF     VASS VDMYA+
Sbjct: 251 YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK 310

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CG+L  +  +F+ VQ K+L LW ++I+    H R K  + LF KM+ +   P+ +TF +L
Sbjct: 311 CGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSL 370

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           L  C H+GL+ EG++F ++MR  Y L P   HY+C+VD+LGRA  L EAY+ ++S+  +P
Sbjct: 371 LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDP 430

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
           TA +W +LL +CRV+ N EL E+ A+KL EL+P N GN+VL+SN++AA+++W+++ + R 
Sbjct: 431 TASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRK 490

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
            +R   +KK  G SWI+I +K+H+F   +  H    EI   L  +  K  R+ GY    +
Sbjct: 491 LLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKF-RKFGYKPSVE 549

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
             LH+VE  +K ++L  HSE+LA+ +G++   E S +RI KNLR+CVDCH F K  S   
Sbjct: 550 HELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMAT 609

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
            R ++VRD NRFHHF  G CSCGD+W
Sbjct: 610 RRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 203/383 (53%), Gaps = 7/383 (1%)

Query: 81  HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
           HG +++   +    ++N L+  Y+KC     ARQ+FD M E+  +V WN++I  Y+ +  
Sbjct: 84  HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER-SLVSWNTMIGLYTRNRM 142

Query: 141 CLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANA 200
             EAL +F EM+  G   + +T  + L AC  +       ++H  +VK+  +L +YV  A
Sbjct: 143 ESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTA 202

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           L+ +YA+CG + +A  V   +++K SV+W+SM+ G+VQN  Y +A+  +R  Q    + +
Sbjct: 203 LLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQN 262

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
           Q    + + A   L  L+ GK++HA   K GF S++ + ++ +DMYAKC  +     +F 
Sbjct: 263 QFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFS 322

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
           ++  ++   W TII+G+A++    + + LF  +Q +G+  + +   S+L  C     + +
Sbjct: 323 EVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEE 382

Query: 381 TKEIHGYI-IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS- 436
            +     +    GLS ++V  + +VD+ G+ G +  +  + +SI      S W S+++S 
Sbjct: 383 GRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASC 442

Query: 437 --YVHNGLANEALELFYLMNEAN 457
             Y +  LA  A E  + +   N
Sbjct: 443 RVYKNLELAEVAAEKLFELEPEN 465



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 153/283 (54%), Gaps = 3/283 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG V  A Q+FD + +R++ +WN M+G Y  N      L+ +  MR  G     FT 
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165

Query: 62  PCVIKACAMLKD-LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             V+ AC +  D L+C  K+H L +K   D   ++  +L+ +YAKC   + A Q+F+ M 
Sbjct: 166 SSVLSACGVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K  V  W+S+++ Y  +    EAL L+R  QR+ L  N +T  + + AC + +    G 
Sbjct: 225 DKSSVT-WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 283

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA   KSG    V+VA++ + MYA+CG + E+  +  +++ K+   WN++++GF ++ 
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 343

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
              + M  F ++Q  G  P++V   + +S  G  G +  G+  
Sbjct: 344 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 161/326 (49%), Gaps = 5/326 (1%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESI 422
           ++  +L  C+    + + K  HG IIR  L  D+ +LN +++ Y KCG ++ +R VF+ +
Sbjct: 63  LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             + +VSW +MI  Y  N + +EAL++F  M     +    T+ S LSA        + K
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK 182

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           +L+   ++   +L   V ++L+D+YA+CG +  A +VF  +Q K  + W+SM+     + 
Sbjct: 183 KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
             + A+ L+ + +  S   +  T  +++ ACS+   + EGK+   ++ C           
Sbjct: 243 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI-CKSGFGSNVFVA 301

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
           +  VD+  +   L E+Y     +Q E   E+W  ++     H+  +   I+ +K ++ D 
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEVMILFEK-MQQDG 359

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVR 688
            +P N V  S++ +       VE+ R
Sbjct: 360 MHP-NEVTFSSLLSVCGHTGLVEEGR 384



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + DA Q+F+ +  ++  TW++M+  YV N      L  Y R + + +  + FT
Sbjct: 206 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI AC+ L  L  G ++H ++ K G+ S  F+ +S V MYAKC   R++  +F  + 
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 325

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK ++ LWN+IIS ++   +  E + LF +MQ+ G+  N  TF + L  C  +     G 
Sbjct: 326 EK-NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGR 384

Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
                   + G +  V   + ++ +  R G ++EA  ++  +    + S W S+L
Sbjct: 385 RFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/699 (36%), Positives = 409/699 (58%), Gaps = 15/699 (2%)

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSF-ETLGM----EIHAATVKSGQ-NLQVY 196
           EA  LF +M  + +  +  ++V  L +  + S  E +G+    E+H   + +G  +  V 
Sbjct: 12  EATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITTGLVDFMVG 70

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           + N L+ MYA+CG + +A  V   +  KDSVSWNSM+TG  QN  + +A++ ++ ++   
Sbjct: 71  IGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHE 130

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             P     ++++S+   L     G+++H  ++K G   ++ + N LM +YA+   +N   
Sbjct: 131 ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECR 190

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHL-KALELFRTVQLEGLDADVMIIGSVLMACSGL 375
           ++F  M   D +SW +II   A +   L +A+  F      G   + +   SVL A S L
Sbjct: 191 KIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSL 250

Query: 376 KCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSM 433
                 K+IHG  ++  ++D     NA++  YGKCG +D    +F  + E +D V+W SM
Sbjct: 251 SFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSM 310

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           IS Y+HN L  +AL+L + M +     DS    + LSA +S++ L++G E++   +R   
Sbjct: 311 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 370

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
             +  V S+LVDMY++CG LD A + FN +  ++   W SMI+    HG+G+ A+ LF  
Sbjct: 371 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFAN 430

Query: 554 MEAE-SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           M+ +    PDH+TF+ +L ACSH+GL+ EG K  E M   Y L P  EH++C+ DLLGRA
Sbjct: 431 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRA 490

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGA-CRVHSNK-ELGEIVAKKLLELDPGNPGNYVL 670
             L++   F+  M ++P   +W  +LGA CR +  K ELG+  A+ L +L+P N  NYVL
Sbjct: 491 GELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVL 550

Query: 671 ISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKK 730
           + N++AA  +W+D+ + R +M+ + +KK  G SW+ + + +H F+A DKSH ++D IYKK
Sbjct: 551 LGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIYKK 610

Query: 731 LAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL-IRIT 789
           L E+  K+ R+ GYV QT F L+++E+E K ++L  HSE+LA+A+ +      +L IRI 
Sbjct: 611 LKELNRKM-RDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIM 669

Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
           KNLRVC DCHS  K +S++ GR++++RD+NR+   +  +
Sbjct: 670 KNLRVCGDCHSAFKYISKIEGRQIILRDSNRYEDHQPQI 708



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 261/501 (52%), Gaps = 21/501 (4%)

Query: 74  LDCGAKIHGLVLKCGYDSTDFIV---NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L  G ++HG V+  G    DF+V   N LV MYAKC     AR++F  M EK D V WNS
Sbjct: 49  LKKGREVHGHVITTGL--VDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEK-DSVSWNS 105

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I+    +G  +EA+  ++ M+R  ++  ++T +++L +C    +  LG +IH  ++K G
Sbjct: 106 MITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 165

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL-YCKAMQFF 249
            +L V V+NAL+ +YA  G + E   +   +   D VSWNS++     ++    +A+  F
Sbjct: 166 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACF 225

Query: 250 RELQGAGQKPDQVC--TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
                AGQK +++   +V +  +S   G L  GK++H  A+K     +    N L+  Y 
Sbjct: 226 LNALRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKYNIADEATTENALIACYG 283

Query: 308 KCCCVNYMGRVFYQMTA-QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
           KC  ++   ++F +M+  +D ++W ++I+GY  N    KAL+L   +   G   D  +  
Sbjct: 284 KCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 343

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           +VL A + +  + +  E+H   +R  L SD+V+ +A+VD+Y KCG +DY+   F ++  +
Sbjct: 344 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 403

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMN-EANVESDSITLVSALSAASSLSILKKG-KE 483
           +  SW SMIS Y  +G   EAL+LF  M  +     D +T V  LSA S   +L++G K 
Sbjct: 404 NSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 463

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI----NAN 538
                   G        S + D+  R G LD      + +  K ++++W +++     AN
Sbjct: 464 FESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRAN 523

Query: 539 GLHGR-GKVAIDLFYKMEAES 558
           G     GK A ++ +++E E+
Sbjct: 524 GRKAELGKKAAEMLFQLEPEN 544



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/473 (31%), Positives = 240/473 (50%), Gaps = 22/473 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA ++F  + ++   +WN+M+     NG  +  +E Y  MR   I   +FT
Sbjct: 78  MYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFT 137

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + +CA LK    G +IHG  LK G D    + N+L+ +YA+     + R++F  M 
Sbjct: 138 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 197

Query: 121 EKEDVVLWNSIISAYSASGQCL-EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           E  D V WNSII A ++S + L EA+  F    R G   N  TF + L A    SF  LG
Sbjct: 198 E-HDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELG 256

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL-ENKDSVSWNSMLTGFVQ 238
            +IH   +K     +    NALIA Y +CG+M     +  ++ E +D V+WNSM++G++ 
Sbjct: 257 KQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIH 316

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N+L  KA+     +   GQ+ D       +SA   +  L  G E+HA +++    SD+ +
Sbjct: 317 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 376

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG- 357
           G+ L+DMY+KC  ++Y  R F  M  ++  SW ++I+GYA++    +AL+LF  ++L+G 
Sbjct: 377 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQ 436

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
              D +    VL ACS       G K      + +G   R     +   + + D+ G+ G
Sbjct: 437 TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPR-----IEHFSCMADLLGRAG 491

Query: 411 NIDYSRNVFESIESK-DVVSWTSMISSYVH-NG----LANEALELFYLMNEAN 457
            +D   +  + +  K +V+ W +++ +    NG    L  +A E+ + +   N
Sbjct: 492 ELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 544


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/650 (35%), Positives = 365/650 (56%), Gaps = 39/650 (6%)

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
            +S+ +N  L    ++      + F++ ++  G + DQ   +  + A  ++  L  G EL
Sbjct: 74  PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           H  A K   + D  +    MDMYA C  +NY   VF +M+ +D ++W T+I  Y +    
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII-------------- 389
            +A +LF  ++   +  D MI+ +++ AC     M   + I+ ++I              
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253

Query: 390 ------------------RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
                             +  + +L +  A+V  Y KCG +D ++ +F+  E KD+V WT
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWT 313

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           +MIS+YV +    EAL +F  M  + ++ D +++ S +SA ++L IL K K ++  I   
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN 373

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           G   E S+ ++L++MYA+CG LD    VF  +  ++++ W+SMINA  +HG    A+ LF
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLF 433

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
            +M+ E+  P+ +TF+ +LY CSHSGL+ EGKK    M  +Y + P  EHY C+VDL GR
Sbjct: 434 ARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGR 493

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
           AN L EA + + SM +     +W +L+ ACR+H   ELG+  AK++LEL+P + G  VL+
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLM 553

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           SN++A  ++W+DV  +R  M    + K  G S I+   K H F+  DK H +S+EIY KL
Sbjct: 554 SNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKL 613

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGS------L 785
            E+  KL +  GYV     VL +VEEEEK  ++  HSE+LA+ +G++   +        +
Sbjct: 614 DEVVSKL-KLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV 672

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           IRI KNLRVC DCH F KLVS+++ RE++VRD  RFH ++ G+CSC DYW
Sbjct: 673 IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 249/498 (50%), Gaps = 46/498 (9%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A  +F  +    + +++N  +   S S +    +  ++ ++ VG   + ++F+  L+A  
Sbjct: 63  ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
             S    GME+H    K       +V    + MYA CG++  A  V  ++ ++D V+WN+
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M+  + +  L  +A + F E++ +   PD++   N VSA GR GN+   + ++ + I+  
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFY------------------------------- 320
              D  +   L+ MYA   C++ M R F+                               
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMD-MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301

Query: 321 -QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
            Q   +D + WTT+I+ Y +++   +AL +F  +   G+  DV+ + SV+ AC+ L  + 
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361

Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
           + K +H  I   GL S+L I NA++++Y KCG +D +R+VFE +  ++VVSW+SMI++  
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            +G A++AL LF  M + NVE + +T V  L   S   ++++GK++   +  + +N+   
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDE-YNITPK 480

Query: 499 VA--SSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMINANGLHGR---GKVAIDLFY 552
           +     +VD++ R   L  A +V   +    ++++W S+++A  +HG    GK A     
Sbjct: 481 LEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRIL 540

Query: 553 KMEAESFAPDHITFLALL 570
           ++E     PDH   L L+
Sbjct: 541 ELE-----PDHDGALVLM 553



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 208/449 (46%), Gaps = 41/449 (9%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
            +N  L     + EP   +  Y R+R +G  +D F+F  ++KA + +  L  G ++HG+ 
Sbjct: 78  VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVA 137

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
            K       F+    + MYA C     AR +FD M  + DVV WN++I  Y   G   EA
Sbjct: 138 FKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR-DVVTWNTMIERYCRFGLVDEA 196

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
             LF EM+   ++ +       + AC  +        I+   +++   +  ++  AL+ M
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256

Query: 205 YA-------------------------------RCGKMTEAAGVLYQLENKDSVSWNSML 233
           YA                               +CG++ +A  +  Q E KD V W +M+
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           + +V++D   +A++ F E+  +G KPD V   + +SA   LG L   K +H+     G  
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S+L I N L++MYAKC  ++    VF +M  ++ +SW+++I   + +     AL LF  +
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG-----YIIRKGLSDLVILNAIVDVYGK 408
           + E ++ + +    VL  CS    + + K+I       Y I   L        +VD++G+
Sbjct: 437 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH---YGCMVDLFGR 493

Query: 409 CGNIDYSRNVFESIE-SKDVVSWTSMISS 436
              +  +  V ES+  + +VV W S++S+
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSA 522



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 7/238 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG + DA+ +FD+  ++ +  W  M+ AYV +  P   L  +  M   GI  D  + 
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             VI ACA L  LD    +H  +   G +S   I N+L+ MYAKC      R +F++M  
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM-P 406

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + +VV W+S+I+A S  G+  +AL LF  M++  +  N  TFV  L  C  S     G +
Sbjct: 407 RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466

Query: 182 IHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
           I A+          L+ Y    ++ ++ R   + EA  V+  +    + V W S+++ 
Sbjct: 467 IFASMTDEYNITPKLEHY--GCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/368 (22%), Positives = 153/368 (41%), Gaps = 32/368 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG +  A  +FD++S R V TWN M+  Y   G      + +  M+   +  D   
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ AC    ++     I+  +++        ++ +LV MYA       AR+ F +M 
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274

Query: 121 ------------------------------EKEDVVLWNSIISAYSASGQCLEALGLFRE 150
                                         EK+D+V W ++ISAY  S    EAL +F E
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M   G+  +  +  + + AC +         +H+    +G   ++ + NALI MYA+CG 
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           +     V  ++  ++ VSW+SM+     +     A+  F  ++    +P++V  V  +  
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454

Query: 271 SGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT-AQDFI 328
               G +  GK++ A    +      L+    ++D++ +   +     V   M  A + +
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514

Query: 329 SWTTIIAG 336
            W ++++ 
Sbjct: 515 IWGSLMSA 522


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/698 (33%), Positives = 387/698 (55%), Gaps = 47/698 (6%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGK--MTEAAGVLYQLENKDS--VSWNSMLTGF 236
           +IH+  +KSG +  ++  + LI   A      ++ A  + + + ++      WN+++   
Sbjct: 43  QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAH 102

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
                   ++  F ++  +G  P+     +   +  +       K+LHA+A+K       
Sbjct: 103 SLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHP 162

Query: 297 QIGNTLMDMYAKCC-------------------------------CVNYMGRVFYQMTAQ 325
            +  +L+ MY++                                  V+   R+F ++ A+
Sbjct: 163 HVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAK 222

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           D +SW  +IAGY Q+    +AL  F  +Q   +  +   + SVL AC  L+ +   K I 
Sbjct: 223 DVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIG 282

Query: 386 GYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
            ++  +G   +L ++NA+VD+Y KCG I  +R +F+ +E KDV+ W +MI  Y H  L  
Sbjct: 283 SWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYE 342

Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG------- 497
           EAL LF +M   NV  + +T ++ L A +SL  L  GK ++ +I +   NL+G       
Sbjct: 343 EALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDK---NLKGTGNVNNV 399

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
           S+ +S++ MYA+CG +++A +VF  + ++ L  W +MI+   ++G  + A+ LF +M  E
Sbjct: 400 SLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINE 459

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
            F PD ITF+ +L AC+ +G +  G ++   M  DY + P  +HY C++DLL R+   +E
Sbjct: 460 GFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDE 519

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           A   + +M++EP   +W +LL ACR+H   E GE VA++L EL+P N G YVL+SN++A 
Sbjct: 520 AKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAG 579

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           + +W DV ++R ++   G+KK PG + IEI   +H F+  DK H +S+ I++ L E+   
Sbjct: 580 AGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRL 639

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVD 797
           LE E G+V  T  VL++++EE K   L  HSE+LAIA+G++ +  GS IRI KNLRVC +
Sbjct: 640 LE-ETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRN 698

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CHS  KL+S++F RE++ RD NRFHHF+ G CSC D W
Sbjct: 699 CHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 273/568 (48%), Gaps = 60/568 (10%)

Query: 35  SNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF 94
           S+  P ++LE +  + +L                A   D+    +IH L++K G  +T F
Sbjct: 15  SSDPPYKLLENHPHLNLL----------------AKCPDIPSLKQIHSLIIKSGLHNTLF 58

Query: 95  IVNSLVAMYA--KCYDFRKARQLFDRMG-EKEDVVLWNSIISAYSASGQCLEALGLFREM 151
             + L+   A     D   A  LF  +  +  ++ +WN++I A+S +     +L LF +M
Sbjct: 59  AQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQM 118

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
              GL  N++TF +  ++C  S       ++HA  +K   +L  +V  +LI MY++ G++
Sbjct: 119 LHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGEL 178

Query: 212 -------------------------------TEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                                           +A  +  ++  KD VSWN+M+ G+VQ+ 
Sbjct: 179 RHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSG 238

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +A+  F  +Q A   P+Q   V+ +SA G L +L  GK + ++   +GF  +LQ+ N
Sbjct: 239 RFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVN 298

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY+KC  +    ++F  M  +D I W T+I GY   + + +AL LF  +  E +  
Sbjct: 299 ALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTP 358

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KG---LSDLVILNAIVDVYGKCGNIDYS 415
           + +   +VL AC+ L  +   K +H YI +  KG   ++++ +  +I+ +Y KCG ++ +
Sbjct: 359 NDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVA 418

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             VF S+ S+ + SW +MIS    NG A  AL LF  M     + D IT V  LSA +  
Sbjct: 419 EQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQA 478

Query: 476 SILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTS 533
             ++ G      + +  G + +      ++D+ AR G  D A  +  N     D  +W S
Sbjct: 479 GFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGS 538

Query: 534 MINANGLHGR---GKVAIDLFYKMEAES 558
           ++NA  +HG+   G+   +  +++E E+
Sbjct: 539 LLNACRIHGQVEFGEYVAERLFELEPEN 566



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 156/308 (50%), Gaps = 6/308 (1%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G V DA +LFD++  + V +WNAM+  YV +G     L  ++RM+   +S +  T   V+
Sbjct: 207 GHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVL 266

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
            AC  L+ L+ G  I   V   G+     +VN+LV MY+KC +   AR+LFD M E +DV
Sbjct: 267 SACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGM-EDKDV 325

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           +LWN++I  Y       EAL LF  M R  +  N  TF+A L AC       LG  +HA 
Sbjct: 326 ILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAY 385

Query: 186 TVK----SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
             K    +G    V +  ++I MYA+CG +  A  V   + ++   SWN+M++G   N  
Sbjct: 386 IDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGH 445

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGN 300
             +A+  F E+   G +PD +  V  +SA  + G +  G    +   K  G    LQ   
Sbjct: 446 AERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYG 505

Query: 301 TLMDMYAK 308
            ++D+ A+
Sbjct: 506 CMIDLLAR 513



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A +LFD +  + V  WN M+G Y         L  +  M    ++ +  T
Sbjct: 303 MYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVT 362

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK----CGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           F  V+ ACA L  LD G  +H  + K     G  +   +  S++ MYAKC     A Q+F
Sbjct: 363 FLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVF 422

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
             MG +  +  WN++IS  + +G    ALGLF EM   G   +  TFV  L AC  + F 
Sbjct: 423 RSMGSRS-LASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFV 481

Query: 177 TLGMEIHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSM 232
            LG    ++  K       LQ Y    +I + AR GK  EA  ++  +E   D   W S+
Sbjct: 482 ELGHRYFSSMNKDYGISPKLQHY--GCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSL 539

Query: 233 LTG 235
           L  
Sbjct: 540 LNA 542



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 38/246 (15%)

Query: 376 KC--MSQTKEIHGYIIRKGLSDLVILNAIVDVY---GKCGNIDYSRNVFESI--ESKDVV 428
           KC  +   K+IH  II+ GL + +   + +  +       ++ Y+ ++F SI  +  ++ 
Sbjct: 34  KCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIF 93

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
            W ++I ++        +L LF  M  + +  +S T  S   + +      + K+L+   
Sbjct: 94  IWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHA 153

Query: 489 IRKGFNLEGSVASSLVDMYARCGAL-------------------------------DIAN 517
           ++   +L   V +SL+ MY++ G L                               D A 
Sbjct: 154 LKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDAR 213

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           ++F+ +  KD++ W +MI      GR + A+  F +M+    +P+  T +++L AC H  
Sbjct: 214 RLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLR 273

Query: 578 LINEGK 583
            +  GK
Sbjct: 274 SLELGK 279



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 1/141 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  AEQ+F  +  R++ +WNAM+     NG   R L  +  M   G   D  T
Sbjct: 408 MYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDIT 467

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK-CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC     ++ G +    + K  G          ++ + A+   F +A+ L   M
Sbjct: 468 FVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNM 527

Query: 120 GEKEDVVLWNSIISAYSASGQ 140
             + D  +W S+++A    GQ
Sbjct: 528 EMEPDGAIWGSLLNACRIHGQ 548


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/771 (32%), Positives = 441/771 (57%), Gaps = 20/771 (2%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
            +D+ TF  ++K+C   +D   G  +H  +++   +    + NSL+++Y+K  D  KA  
Sbjct: 59  PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118

Query: 115 LFDRMGE--KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           +F+ M    K DVV W+++++ Y  +G+ L+A+ +F E   +GLV N Y + A ++AC +
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178

Query: 173 SSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAA-GVLYQLENKDSVSWN 230
           S F  +G       +K+G     V V  +LI M+ +     E A  V  ++   + V+W 
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
            M+T  +Q     +A++FF ++  +G + D+    +  SA   L NL  GK+LH++AI+ 
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298

Query: 291 GFVSDLQIGNTLMDMYAKCCC---VNYMGRVFYQMTAQDFISWTTIIAGYAQN-NCHLKA 346
           G V D++   +L+DMYAKC     V+   +VF +M     +SWT +I GY +N N   +A
Sbjct: 299 GLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA 356

Query: 347 LELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVD 404
           + LF  +  +G ++ +     S   AC  L      K++ G   ++GL S+  + N+++ 
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS 416

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
           ++ K   ++ ++  FES+  K++VS+ + +     N    +A +L   + E  +   + T
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
             S LS  +++  ++KG++++  +++ G +    V ++L+ MY++CG++D A++VFN ++
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            +++I WTSMI     HG     ++ F +M  E   P+ +T++A+L ACSH GL++EG +
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596

Query: 585 FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
               M  D+++ P  EHYAC+VDLL RA  L +A++F+ +M  +    VW   LGACRVH
Sbjct: 597 HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656

Query: 645 SNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSW 704
           SN ELG++ A+K+LELDP  P  Y+ +SN++A + KW++  ++R +M+   L K  G SW
Sbjct: 657 SNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSW 716

Query: 705 IEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV----EEEEK 760
           IE+G+KIH F   D +H  + +IY +L  +  +++R  GYV  T  VLH +    +E EK
Sbjct: 717 IEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKR-CGYVPDTDLVLHKLEEENDEAEK 775

Query: 761 VQMLYGHSERLAIAYGVL---KSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
            ++LY HSE++A+A+G++   KS    +I+ +  + V +    F  + SR+
Sbjct: 776 ERLLYQHSEKIAVAFGLISTSKSRPLKMIQTSFKILVVLAISGFPMMESRI 826



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 159/590 (26%), Positives = 301/590 (51%), Gaps = 21/590 (3%)

Query: 1   MYGKCGSVLDAEQLFD---KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
           +Y K G    AE +F+   +  +R V +W+AM+  Y +NG  L  ++ +     LG+  +
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN-SLVAMYAKCYD-FRKARQL 115
            + +  VI+AC+    +  G    G ++K G+  +D  V  SL+ M+ K  + F  A ++
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD+M E  +VV W  +I+     G   EA+  F +M   G  ++ +T  +   AC +   
Sbjct: 226 FDKMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARC---GKMTEAAGVLYQLENKDSVSWNSM 232
            +LG ++H+  ++SG  L   V  +L+ MYA+C   G + +   V  ++E+   +SW ++
Sbjct: 285 LSLGKQLHSWAIRSG--LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342

Query: 233 LTGFVQN-DLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           +TG+++N +L  +A+  F E+   G  +P+     +A  A G L +   GK++   A K+
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G  S+  + N+++ M+ K   +    R F  ++ ++ +S+ T + G  +N    +A +L 
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
             +    L        S+L   + +  + + ++IH  +++ GLS +  + NA++ +Y KC
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G+ID +  VF  +E+++V+SWTSMI+ +  +G A   LE F  M E  V+ + +T V+ L
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAIL 582

Query: 470 SAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-D 527
           SA S + ++ +G +  N          +    + +VD+  R G L  A +  N +  + D
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642

Query: 528 LILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +++W + + A  +H     GK+A      +E +   P     L+ +YAC+
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKI--LELDPNEPAAYIQLSNIYACA 690


>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
 gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 820

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/734 (34%), Positives = 406/734 (55%), Gaps = 17/734 (2%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG--ISVDAFTFPCVIKAC 68
           A QLFD + + T   WN ++  ++ N  P   L  YSRM+      + DA+T+   +KAC
Sbjct: 58  ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMY------AKCYDFRKARQLFDRMGEK 122
           A  K+L  G  +H  +++C  +S+  + NSL+ MY        C+++   R++FD M  +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNM-RR 176

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
           ++VV WN++IS Y  +G+  EA   F  M R+ +  +  +FV    A   S         
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVF 236

Query: 183 HAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +   +K G      ++V ++ I+MYA  G +  +  V      ++   WN+M+  +VQND
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              ++++ F E  G+ +   D+V  + A SA   L  +  G++ H +  K      + I 
Sbjct: 297 CLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIV 356

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+LM MY++C  V+    VF  M  +D +SW T+I+ + QN    + L L   +Q +G  
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
            D + + ++L A S L+     K+ H ++IR+G+    + + ++D+Y K G I  S+ +F
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLF 476

Query: 420 ES--IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           E      +D  +W SMIS Y  NG   +   +F  M E N+  +++T+ S L A S +  
Sbjct: 477 EGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGS 536

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           +  GK+L+GF IR+  +    VAS+LVDMY++ GA+  A  +F+  + ++ + +T+MI  
Sbjct: 537 VDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG 596

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G HG G+ AI LF  M+     PD ITF+A+L ACS+SGLI+EG K  E MR  Y + P
Sbjct: 597 YGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQP 656

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT-AEVWCALLGACRVHSNKELGEIVAKK 656
             EHY C+ D+LGR   + EAY+FV+ +  E   AE+W +LLG+C++H   EL E V+++
Sbjct: 657 SSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSER 716

Query: 657 LLELDPGN--PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           L + D G    G  VL+SN++A  +KWK V++VR  MR  GLKK  G S IEI   ++ F
Sbjct: 717 LAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCF 776

Query: 715 IARDKSHSESDEIY 728
           ++RD+ H  S EIY
Sbjct: 777 VSRDQEHPHSSEIY 790



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 210/402 (52%), Gaps = 26/402 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG---ISVD 57
           MY + G +  + ++FD   +R +  WN M+G YV N   +  +E +  +  +G   I  D
Sbjct: 260 MYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF--LEAIGSKEIVSD 317

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             T+     A + L+ ++ G + HG V K   +    IVNSL+ MY++C    K+  +F 
Sbjct: 318 EVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFL 377

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            M E+ DVV WN++ISA+  +G   E L L  EMQ+ G   +  T  A L A  +   + 
Sbjct: 378 SMRER-DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKE 436

Query: 178 LGMEIHAATVKSGQNLQVYVANA-LIAMYARCG------KMTEAAGVLYQLENKDSVSWN 230
           +G + HA  ++ G  +Q    N+ LI MY++ G      K+ E +G       +D  +WN
Sbjct: 437 IGKQTHAFLIRQG--IQFEGMNSYLIDMYSKSGLIRISQKLFEGSG----YAERDQATWN 490

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           SM++G+ QN    K    FR++     +P+ V   + + A  ++G++  GK+LH ++I+Q
Sbjct: 491 SMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ 550

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
               ++ + + L+DMY+K   + Y   +F Q   ++ +++TT+I GY Q+    +A+ LF
Sbjct: 551 YLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLF 610

Query: 351 RTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIH 385
            ++Q  G+  D +   +VL ACS       GLK   + +E++
Sbjct: 611 LSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVY 652



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 166/329 (50%), Gaps = 10/329 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGSV  +  +F  + +R V +WN M+ A+V NG     L     M+  G  +D  T
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A + L++ + G + H  +++ G    + + + L+ MY+K    R +++LF+  G
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNSYLIDMYSKSGLIRISQKLFEGSG 480

Query: 121 EKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             E D   WNS+IS Y+ +G   +   +FR+M    +  NA T  + L AC       LG
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG 540

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H  +++   +  V+VA+AL+ MY++ G +  A  +  Q + ++SV++ +M+ G+ Q+
Sbjct: 541 KQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQH 600

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            +  +A+  F  +Q +G KPD +  V  +SA    G +  G ++        F    ++ 
Sbjct: 601 GMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI--------FEEMREVY 652

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           N        CC  + +GRV     A +F+
Sbjct: 653 NIQPSSEHYCCITDMLGRVGRVNEAYEFV 681



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 8/188 (4%)

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN--VESDSITLVS 467
           GN   +R +F++I     V W ++I  ++ N L +EAL  +  M +       D+ T  S
Sbjct: 53  GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR------CGALDIANKVFN 521
            L A +    LK GK ++  +IR   N    V +SL++MY        C   D+  KVF+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            ++ K+++ W ++I+     GR   A   F  M      P  ++F+ +  A S S  I +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232

Query: 582 GKKFLEIM 589
              F  +M
Sbjct: 233 ANVFYGLM 240


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 257/786 (32%), Positives = 421/786 (53%), Gaps = 29/786 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K  +++ A   F+ +  R V +WN+ML  Y+ NGE L+ +E +  M   G   D  TF
Sbjct: 82  YAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTF 141

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++K C+ L+D   G +IHG+V++ G D+     ++L+ MYAK   F ++ ++F  + E
Sbjct: 142 AIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 201

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K  V  W++II+    +     AL  F+EMQ+V    +   + + L++C   S   LG +
Sbjct: 202 KNSVS-WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQ 260

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  +KS       V  A + MYA+C  M +A  +  + EN +  S+N+M+TG+ Q + 
Sbjct: 261 LHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEH 320

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA+  F  L  +G   D++       A   +  L  G +++  AIK     D+ + N 
Sbjct: 321 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANA 380

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
            +DMY KC  +    RVF +M  +D +SW  IIA + QN    + L LF ++    ++ D
Sbjct: 381 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 440

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV-- 418
               GSVL AC+G   +    EIH  I++ G+ S+  +  +++D+Y KCG I+ +  +  
Sbjct: 441 EFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 499

Query: 419 --------------FESIESKDV----VSWTSMISSYVHNGLANEALELFYLMNEANVES 460
                          E + +K +    VSW S+IS YV    + +A  LF  M E  +  
Sbjct: 500 RFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITP 559

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           D  T  + L   ++L+    GK+++  +I+K    +  ++S+LVDMY++CG L  +  +F
Sbjct: 560 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMF 619

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
                +D + W +MI     HG+G+ AI LF +M  E+  P+H+TF+++L AC+H GLI+
Sbjct: 620 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 679

Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
           +G ++  +M+ DY LDP   HY+ +VD+LG++  ++ A + +R M  E    +W  LLG 
Sbjct: 680 KGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGV 739

Query: 641 CRVHSNK-ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           C +H N  E+ E     LL LDP +   Y L+SNV+A +  W+ V  +R  MRG  LKK 
Sbjct: 740 CTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKE 799

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG SW+E+ +++H F+  DK+H   +EIY++L  I  +++        + FV   VE EE
Sbjct: 800 PGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP----FDDSSFV-PGVEVEE 854

Query: 760 KVQMLY 765
           + Q  Y
Sbjct: 855 EDQWCY 860



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 288/565 (50%), Gaps = 27/565 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K    +++ ++F  + ++   +W+A++   V N      L+ +  M+ +   V    
Sbjct: 182 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 241

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+++CA L +L  G ++H   LK  + +   +  + + MYAKC + + A+ LFD+  
Sbjct: 242 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDK-S 300

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  +   +N++I+ YS      +AL LF  +   GL  +  +     +AC      + G+
Sbjct: 301 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 360

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +I+   +KS  +L V VANA I MY +C  + EA  V  ++  +D+VSWN+++    QN 
Sbjct: 361 QIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 420

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              + +  F  +  +  +PD+  T  +V  +   G+L  G E+H+  +K G  S+  +G 
Sbjct: 421 KGYETLFLFVSMLRSRIEPDEF-TFGSVLKACTGGSLGYGMEIHSSIVKSGMASNSSVGC 479

Query: 301 TLMDMYAKCCCVNYMGRV---FYQMT----------------AQDF-ISWTTIIAGYAQN 340
           +L+DMY+KC  +    ++   F+Q T                 Q+  +SW +II+GY   
Sbjct: 480 SLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 539

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
                A  LF  +   G+  D     +VL  C+ L      K+IH  +I+K L SD+ I 
Sbjct: 540 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIS 599

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           + +VD+Y KCG++  SR +FE    +D V+W +MI  Y H+G   EA++LF  M   N++
Sbjct: 600 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 659

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIAN 517
            + +T +S L A + + ++ KG E   +++++ + L+  +   S++VD+  + G +  A 
Sbjct: 660 PNHVTFISILRACAHMGLIDKGLEYF-YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 718

Query: 518 KVFNCVQTK-DLILWTSMINANGLH 541
           ++   +  + D ++W +++    +H
Sbjct: 719 ELIREMPFEADDVIWRTLLGVCTIH 743



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 261/521 (50%), Gaps = 35/521 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC ++ DA+ LFDK       ++NAM+  Y       + L  + R+   G+  D  +
Sbjct: 283 MYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 342

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V +ACA++K L  G +I+ L +K        + N+ + MY KC    +A ++FD M 
Sbjct: 343 LSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM- 401

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D V WN+II+A+  +G+  E L LF  M R  +  + +TF + L+AC   S    GM
Sbjct: 402 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGSL-GYGM 460

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEA-------------AGVLYQLENKDS- 226
           EIH++ VKSG      V  +LI MY++CG + EA             +G + +LE   + 
Sbjct: 461 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNK 520

Query: 227 ------VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
                 VSWNS+++G+V  +    A   F  +   G  PD+      +     L +   G
Sbjct: 521 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLG 580

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K++HA  IK+   SD+ I +TL+DMY+KC  ++    +F +   +DF++W  +I GYA +
Sbjct: 581 KQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 640

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK--GL-SDLV 397
               +A++LF  + LE +  + +   S+L AC+ +  + +  E + Y++++  GL   L 
Sbjct: 641 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQLP 699

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNG---LANEALELFYL 452
             + +VD+ GK G +  +  +   +  E+ DV+  T +    +H     +A EA      
Sbjct: 700 HYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLR 759

Query: 453 MNEANVESDSITLVSALSAASSL--SILKKGKELNGFIIRK 491
           ++    +S + TL+S + A + +   +    + + GF ++K
Sbjct: 760 LDPQ--DSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 798



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 207/433 (47%), Gaps = 32/433 (7%)

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LG + HA  + SG     +V N L+ +Y        A+ V  ++  +D VSWN M+ G+ 
Sbjct: 24  LGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMINGYA 83

Query: 238 QNDLYCKAMQFFR------------ELQGAGQKPDQVCTVNAVSASGRLGNLLNGK---- 281
           +++   KA  FF              L G  Q  + + ++      GR G   +G+    
Sbjct: 84  KSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAI 143

Query: 282 ---------------ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
                          ++H   ++ G  +D+   + L+DMYAK        RVF  +  ++
Sbjct: 144 ILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 203

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SW+ IIAG  QNN    AL+ F+ +Q         I  SVL +C+ L  +    ++H 
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 263

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           + ++    +D ++  A +D+Y KC N+  ++ +F+  E+ +  S+ +MI+ Y       +
Sbjct: 264 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFK 323

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL LF+ +  + +  D I+L     A + +  L +G ++    I+   +L+  VA++ +D
Sbjct: 324 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAID 383

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY +C AL  A +VF+ ++ +D + W ++I A+  +G+G   + LF  M      PD  T
Sbjct: 384 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 443

Query: 566 FLALLYACSHSGL 578
           F ++L AC+   L
Sbjct: 444 FGSVLKACTGGSL 456



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 186/409 (45%), Gaps = 36/409 (8%)

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           +N      + G L  GK+ HA+ I  GF     + N L+ +Y           VF +M  
Sbjct: 10  MNRAVECAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPL 69

Query: 325 QDFISWTTIIAGYA-------------------------------QNNCHLKALELFRTV 353
           +D +SW  +I GYA                               QN   LK++E+F  +
Sbjct: 70  RDVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDM 129

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
              G + D      +L  CS L+  S   +IHG ++R G  +D+V  +A++D+Y K    
Sbjct: 130 GRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRF 189

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             S  VF+ I  K+ VSW+++I+  V N L + AL+ F  M + N         S L + 
Sbjct: 190 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 249

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           ++LS L+ G +L+   ++  F  +G V ++ +DMYA+C  +  A  +F+  +  +   + 
Sbjct: 250 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYN 309

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRC 591
           +MI        G  A+ LF+++ +     D I+   +  AC+    ++EG +  ++ ++ 
Sbjct: 310 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKS 369

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
              LD    + A  +D+ G+   L EA++    M+    A  W A++ A
Sbjct: 370 SLSLDVCVANAA--IDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 415


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/672 (34%), Positives = 392/672 (58%), Gaps = 37/672 (5%)

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-K 258
           +++  + R  +  +A GV  +   + +  W   ++G  +   Y   M+ F E+   G+  
Sbjct: 50  SVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEAT 109

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P+       V     +G++ +GK +H + ++ G   D+ + N ++DMYAKC       RV
Sbjct: 110 PNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRV 169

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFR------TVQLEGLDADVMIIGSVLMAC 372
           F  M  +D +SW   I    Q+   L +++LF       T     + + +M  G    A 
Sbjct: 170 FGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADAL 229

Query: 373 SGLKCMSQT-------------------------KEIHGYIIRKGLS-DLVILNAIVDVY 406
           S L+ M+Q                          +++HG ++   L  D  + ++++D+Y
Sbjct: 230 SHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMY 289

Query: 407 GKCGNIDYSRNVFE--SIESKDV-VSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
            KCG ++ + +VF+  S  ++D+  +W++M++ YV NG   EAL+LF  M    V +D  
Sbjct: 290 CKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRF 349

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           TL S  +A +++ ++++G++++G + +  + L+  +AS++VDMYA+CG L+ A  +F+  
Sbjct: 350 TLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRA 409

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
            TK++ +WTSM+ +   HG+G++AI+LF +M AE   P+ IT + +L ACSH GL++EG+
Sbjct: 410 CTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGE 469

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRV 643
            + + M+ +Y + P  EHY C+VDL GR+  L++A  F+    I   A VW  LL ACR+
Sbjct: 470 LYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRL 529

Query: 644 HSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
           H + E  ++ ++KL++L+  + G+YV++SN++A + KW D  ++R+ M+   ++K PG S
Sbjct: 530 HQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRS 589

Query: 704 WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
           WI + N +H+F+A D SH +S EIY  L ++ E+L +E GY ++T  V+H+VE+E++   
Sbjct: 590 WIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERL-KEIGYTSRTDLVVHDVEDEQRETA 648

Query: 764 LYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHH 823
           L  HSE+LAIA+G++ +  G+ +RI KNLRVC DCH   K +S   GRE+VVRD  RFHH
Sbjct: 649 LKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHH 708

Query: 824 FEAGVCSCGDYW 835
           F+   CSC D+W
Sbjct: 709 FKDASCSCEDFW 720



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 240/492 (48%), Gaps = 47/492 (9%)

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
           S++  + +   F  AR +FD    +   V W   IS  +  G+  + +  F EM   G  
Sbjct: 50  SVLRFWVRRRRFHDARGVFDERPTRTAPV-WTLTISGCARRGRYADGMRAFAEMLAEGEA 108

Query: 158 T-NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           T NA+   A ++ C        G  +H   +++G +L V + NA++ MYA+CG+   A  
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARR 168

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE---------------LQGAGQKPDQ 261
           V   +  +D+VSWN  +   +Q+     +MQ F E               L  +G   D 
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADA 228

Query: 262 VCTVNAVSASGRLGNLLN----------------GKELHAYAIKQGFVSDLQIGNTLMDM 305
           +  +  ++ +G + N                   G++LH   +      D  + ++LMDM
Sbjct: 229 LSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDM 288

Query: 306 YAKCCCVNYMGRVF---YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           Y KC  +     VF     +T     +W+T++AGY QN    +AL+LFR +  EG+ AD 
Sbjct: 289 YCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADR 348

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFES 421
             + SV  AC+ +  + Q +++HG + +     D  + +AIVD+Y KCGN++ +R++F+ 
Sbjct: 349 FTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDR 408

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
             +K++  WTSM+ SY  +G    A+ELF  M    +  + ITLV  LSA S + ++ +G
Sbjct: 409 ACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEG 468

Query: 482 KELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDL----ILWTSMI 535
            EL    +++ + +  S+   + +VD+Y R G LD   K  N ++  ++    I+W +++
Sbjct: 469 -ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLD---KAKNFIEENNINHEAIVWKTLL 524

Query: 536 NANGLHGRGKVA 547
           +A  LH   + A
Sbjct: 525 SACRLHQHNEYA 536



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 224/496 (45%), Gaps = 50/496 (10%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFTFPCVIKAC 68
           DA  +FD+   RT   W   +      G     +  ++ M   G  + +AF    V++ C
Sbjct: 63  DARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCC 122

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE----- 123
           A + D++ G ++HG +L+ G      + N+++ MYAKC  F +AR++F  M E++     
Sbjct: 123 AGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWN 182

Query: 124 -------------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
                                    D   WN+IIS    SG   +AL   R M + G+V 
Sbjct: 183 IAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVF 242

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           N YT+  A           LG ++H   + +      +V ++L+ MY +CG +  AA V 
Sbjct: 243 NHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVF 302

Query: 219 ---YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
                L    + +W++M+ G+VQN    +A+  FR +   G   D+    +  +A   +G
Sbjct: 303 DHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVG 362

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            +  G+++H    K  +  D  + + ++DMYAKC  +     +F +   ++   WT+++ 
Sbjct: 363 MVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLC 422

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS-------QTKEIHGYI 388
            YA +     A+ELF  +  E +  + + +  VL ACS +  +S       Q +E +G +
Sbjct: 423 SYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIV 482

Query: 389 IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS---YVHNGLAN 444
                  +   N IVD+YG+ G +D ++N  E    + + + W +++S+   + HN  A 
Sbjct: 483 -----PSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAK 537

Query: 445 EALELFYLMNEANVES 460
            A E    + + +  S
Sbjct: 538 LASEKLVQLEQCDAGS 553



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 176/375 (46%), Gaps = 9/375 (2%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           + G +L + QLFD+   R   +WN ++   + +G     L    RM   G+  + +T+  
Sbjct: 190 QSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYST 249

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE-- 121
                 ML   D G ++HG VL    +   F+ +SL+ MY KC     A  +FD      
Sbjct: 250 AFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLT 309

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           ++    W+++++ Y  +G+  EAL LFR M R G+  + +T  +   AC +      G +
Sbjct: 310 RDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQ 369

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H    K    L   +A+A++ MYA+CG + +A  +  +   K+   W SML  +  +  
Sbjct: 370 VHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQ 429

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GFVSDLQIG 299
              A++ F  +      P+++  V  +SA   +G L++  EL+   +++  G V  ++  
Sbjct: 430 GRIAIELFERMTAEKMTPNEITLVGVLSACSHVG-LVSEGELYFKQMQEEYGIVPSIEHY 488

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTA-QDFISWTTIIAG--YAQNNCHLKALELFRTVQLE 356
           N ++D+Y +   ++       +     + I W T+++     Q+N + K L   + VQLE
Sbjct: 489 NCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAK-LASEKLVQLE 547

Query: 357 GLDADVMIIGSVLMA 371
             DA   ++ S + A
Sbjct: 548 QCDAGSYVMLSNIYA 562



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 10/252 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTV---FTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
           MY KCG +  A  +FD  S  T    F W+ M+  YV NG     L+ + RM   G++ D
Sbjct: 288 MYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAAD 347

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            FT   V  ACA +  ++ G ++HG V K  Y     + +++V MYAKC +   AR +FD
Sbjct: 348 RFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFD 407

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           R   K ++ +W S++ +Y++ GQ   A+ LF  M    +  N  T V  L AC      +
Sbjct: 408 RACTK-NIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVS 466

Query: 178 LGMEIHAATVKSGQNLQVYVA--NALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
            G E++   ++    +   +   N ++ +Y R G + +A   + +   N +++ W ++L+
Sbjct: 467 EG-ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLS 525

Query: 235 G--FVQNDLYCK 244
                Q++ Y K
Sbjct: 526 ACRLHQHNEYAK 537


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 220/537 (40%), Positives = 344/537 (64%), Gaps = 7/537 (1%)

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L++MY K   +N   ++F QM  ++ ISWTT+I+ Y++   H KALEL   +  + + 
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            +V    SVL +C+G   MS  + +H  II++GL SD+ + +A++DV+ K G  + + +V
Sbjct: 160 PNVYTYSSVLRSCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ + + D + W S+I  +  N  ++ ALELF  M  A   ++  TL S L A + L++L
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + G + +  I++  ++ +  + ++LVDMY +CG+L+ A +VFN ++ +D+I W++MI+  
Sbjct: 277 ELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL 334

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             +G  + A+ LF +M++    P++IT + +L+ACSH+GL+ +G  +   M+  Y +DP 
Sbjct: 335 AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV 394

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY C++DLLG+A  L++A + +  M+ EP A  W  LLGACRV  N  L E  AKK++
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVI 454

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
            LDP + G Y L+SN++A S+KW  VE++R RMR  G+KK PG SWIE+  +IH+FI  D
Sbjct: 455 ALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGD 514

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            SH +  E+ KKL ++  +L    GYV +T FVL ++E E+    L  HSE+LA+A+G++
Sbjct: 515 NSHPQIVEVSKKLNQLIHRLT-GIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 573

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                 +IRI KNLR+C DCH FCKL S+L  R +V+RD  R+HHF+ G CSCGDYW
Sbjct: 574 TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 204/404 (50%), Gaps = 19/404 (4%)

Query: 41  RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV 100
           R ++    ++  G+  D+ T+  +IK C   + +  G  I   +   G+    F+VN L+
Sbjct: 44  RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103

Query: 101 AMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
            MY K      A QLFD+M ++ +V+ W ++ISAYS      +AL L   M R  +  N 
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQR-NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNV 162

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
           YT+ + L++C   S   +   +H   +K G    V+V +ALI ++A+ G+  +A  V  +
Sbjct: 163 YTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +   D++ WNS++ GF QN     A++ F+ ++ AG   +Q    + + A   L  L  G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
            + H + +K  +  DL + N L+DMY KC  +    RVF QM  +D I+W+T+I+G AQN
Sbjct: 280 MQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN 400
               +AL+LF  ++  G   + + I  VL ACS    +       G+   + +  L  ++
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED-----GWYYFRSMKKLYGID 392

Query: 401 AI-------VDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
            +       +D+ GK G +D +  +   +E   D V+W +++ +
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 193/383 (50%), Gaps = 23/383 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   + DA QLFD++ QR V +W  M+ AY       + LE    M    +  + +T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+++C  + D+     +H  ++K G +S  F+ ++L+ ++AK  +   A  +FD M 
Sbjct: 165 YSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D ++WNSII  ++ + +   AL LF+ M+R G +    T  + L+AC   +   LGM
Sbjct: 222 TG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   VK  Q+L   + NAL+ MY +CG + +A  V  Q++ +D ++W++M++G  QN 
Sbjct: 281 QAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-------KELHAY-AIKQGF 292
              +A++ F  ++ +G KP+ +  V  + A    G L +G       K+L+    +++ +
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELF 350
                    ++D+  K   ++   ++  +M  + D ++W T++ A   Q N  L      
Sbjct: 399 -------GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 451

Query: 351 RTVQLEGLDADVMIIGSVLMACS 373
           + + L+  DA    + S + A S
Sbjct: 452 KVIALDPEDAGTYTLLSNIYANS 474



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 166/338 (49%), Gaps = 18/338 (5%)

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIV 403
           +A++   ++Q  GL AD      ++  C   + + +   I  ++   G   ++ L N ++
Sbjct: 44  RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           ++Y K   ++ +  +F+ +  ++V+SWT+MIS+Y    +  +ALEL  LM   NV  +  
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T  S L + + +S ++    L+  II++G   +  V S+L+D++A+ G  + A  VF+ +
Sbjct: 164 TYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG- 582
            T D I+W S+I     + R  VA++LF +M+   F  +  T  ++L AC+   L+  G 
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL-GAC 641
           +  + I++ D  L         LVD+  +   LE+A +    M+ E     W  ++ G  
Sbjct: 281 QAHVHIVKYDQDLIL----NNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLA 335

Query: 642 RVHSNKELGEIVAKKLLEL--DPGNPGNYVLISNVFAA 677
           +   ++E     A KL E     G   NY+ I  V  A
Sbjct: 336 QNGYSQE-----ALKLFERMKSSGTKPNYITIVGVLFA 368


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/662 (35%), Positives = 377/662 (56%), Gaps = 8/662 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA       +   ++ N L+  Y++ G +  A     ++   ++ SWN ++  + QN 
Sbjct: 53  KLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNG 112

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A   F  +   G +P+ V    A+ A     NL  G++L+     +    D  + +
Sbjct: 113 HPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVES 172

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MY +C  +    R F +   +D + WT +I+ YA N    +ALEL R + LEG+  
Sbjct: 173 SLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKL 232

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNV 418
            +    S+L AC+    +      H      GL  S  V+   +V++YGKCG +D +R V
Sbjct: 233 GLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRV 292

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
            +++  +  VSWT+MI++Y  NG A EA+ LF  M+    E   ITL+S + + + L  L
Sbjct: 293 LDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTL 352

Query: 479 KKGKELNGFI-IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV--QTKDLILWTSMI 535
             GK ++  I     F+    + ++++ MY +CG L++A +VF CV  +T+ ++ WT+MI
Sbjct: 353 SLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMI 412

Query: 536 NANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
            A   +G G+ AI+LF +M  +    P+ +TFL++L ACSH G + +  +    M  D+ 
Sbjct: 413 RAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFG 472

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGEIV 653
           + P  +HY CLVDLLGRA  L EA + + R    E     W A L AC+++ + E  +  
Sbjct: 473 VPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRA 532

Query: 654 AKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHS 713
           AK++ EL+P N    VL+SNV+AA  +  DV ++R  M+ SG+KK  G SWIEI N++H 
Sbjct: 533 AKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHE 592

Query: 714 FIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAI 773
           F+  D SH    EIY +L  +  ++ +E GYV  T+ VL +V+EE+KVQ+L  HSERLA+
Sbjct: 593 FMVSDVSHPRKLEIYSELERLHREI-KEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAM 651

Query: 774 AYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
           A G++ +  G+ +R+ KNLRVC DCH+  K +S++ GR+++VRD +RFHHF+ GVCSCGD
Sbjct: 652 ALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGD 711

Query: 834 YW 835
           YW
Sbjct: 712 YW 713



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 153/504 (30%), Positives = 247/504 (49%), Gaps = 19/504 (3%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           + LD   K+H  +     D   F+ N LV  Y+K      A+  F R+    +   WN +
Sbjct: 46  RGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRI-TLHNAHSWNIL 104

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           ++AY+ +G    A  LF  M   G+  NA T   AL AC  +    LG +++        
Sbjct: 105 MAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEAL 164

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
            +  +V ++LI MY RC ++ EA     +   KD V W +M++ +  N    +A++  R 
Sbjct: 165 EIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRR 224

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIGNTLMDMYAKCC 310
           +   G K      V+ + A     +L NG   H  A   G   S   +  TL+++Y KC 
Sbjct: 225 MDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCG 284

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            V+   RV   M  +  +SWT +IA YAQN    +A+ LF+ + LEG +   + + SV+ 
Sbjct: 285 RVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVD 344

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS---DLVILNAIVDVYGKCGNIDYSRNVFE--SIESK 425
           +C+ L  +S  K IH   IR   S    L++LNA++ +YGKCGN++ +R VFE   + ++
Sbjct: 345 SCAVLGTLSLGKRIHAR-IRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTR 403

Query: 426 DVVSWTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKE- 483
            VV+WT+MI +Y  NG+  EA+ELF  ++ +   E + +T +S L A S L  L++  E 
Sbjct: 404 SVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEH 463

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK----DLILWTSMINANG 539
                   G    G     LVD+  R G L  A K+   ++ K    D++ W + ++A  
Sbjct: 464 FCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLL--LRHKDFEADVVCWIAFLSACQ 521

Query: 540 LHG---RGKVAIDLFYKMEAESFA 560
           ++G   R + A     ++E E+ A
Sbjct: 522 MNGDLERSQRAAKRVSELEPENVA 545



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 218/454 (48%), Gaps = 20/454 (4%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K GS+  A+  F +++     +WN ++ AY  NG P      +  M   G+  +A T 
Sbjct: 77  YSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTL 136

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              + AC   ++L  G K++ L+     +    + +SL+ MY +C +  +A + FDR  E
Sbjct: 137 STALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPE 196

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DVV W ++ISAY+ + +   AL L R M   G+     T+V+ L AC  +     G+ 
Sbjct: 197 K-DVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVA 255

Query: 182 IHAATVKSGQNL-QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            H      G +     VA  L+ +Y +CG++ +A  VL  +  + SVSW +M+  + QN 
Sbjct: 256 FHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNG 315

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA-YAIKQGFVSDLQIG 299
              +A+  F+ +   G +P  +  ++ V +   LG L  GK +HA       F   L + 
Sbjct: 316 NAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLL 375

Query: 300 NTLMDMYAKCCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE- 356
           N ++ MY KC  +     VF    +  +  ++WT +I  YAQN    +A+ELF+ + ++ 
Sbjct: 376 NAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDG 435

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA------IVDVYGKCG 410
           G + + +   SVL ACS L  + Q  E   +    G  D  +  A      +VD+ G+ G
Sbjct: 436 GTEPNRVTFLSVLCACSHLGQLEQAWE---HFCSMG-PDFGVPPAGDHYCCLVDLLGRAG 491

Query: 411 NIDYSRNVF---ESIESKDVVSWTSMISSYVHNG 441
            +  +  +    +  E+ DVV W + +S+   NG
Sbjct: 492 RLGEAEKLLLRHKDFEA-DVVCWIAFLSACQMNG 524



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 157/322 (48%), Gaps = 14/322 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYG+C  + +AE+ FD+  ++ V  W AM+ AY  N    R LE   RM + GI +   T
Sbjct: 177 MYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPT 236

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYD-STDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +  ++ ACA   DL  G   H      G D S+  +  +LV +Y KC     AR++ D M
Sbjct: 237 YVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAM 296

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             +  V  W ++I+AY+ +G   EA+ LF+ M   G   +  T ++ + +C      +LG
Sbjct: 297 PVRTSVS-WTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLG 355

Query: 180 MEIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGF 236
             IHA    S    Q + + NA+I MY +CG +  A  V     L  +  V+W +M+  +
Sbjct: 356 KRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAY 415

Query: 237 VQNDLYCKAMQFFRE-LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            QN +  +A++ F+E L   G +P++V  ++ + A   LG L    E H  ++   F   
Sbjct: 416 AQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWE-HFCSMGPDFGVP 474

Query: 296 LQIGNTLMDMYAKCCCVNYMGR 317
                   D Y  CC V+ +GR
Sbjct: 475 -----PAGDHY--CCLVDLLGR 489



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L + ++L+  I  +  +    + + LVD Y++ G+L  A   F  +   +   W  ++ A
Sbjct: 48  LDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAA 107

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD-YQLD 596
              +G  + A  LF+ M ++   P+ +T    L AC+ +  +  G+K  E++  +  ++D
Sbjct: 108 YAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEID 167

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV--WCALLGA 640
              E  + L+ + GR   +EEA    R+    P  +V  W A++ A
Sbjct: 168 SHVE--SSLITMYGRCREIEEAE---RAFDRSPEKDVVCWTAMISA 208


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/741 (32%), Positives = 406/741 (54%), Gaps = 7/741 (0%)

Query: 6   GSVLDAEQLFDKV-SQRTVFTWNAMLGAYVS-NGEPLRVLETYSRMRVLGISVDAFTFPC 63
           G + DA  L  ++ +  +   WNA++  Y   +G    V   Y  MR  G+     TF  
Sbjct: 146 GRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFAS 205

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++ A A       G ++H   ++ G D+  F+ +SL+ +YAKC     A  +FD  GEK 
Sbjct: 206 MLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEK- 264

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +VV+WN++++    +   +EA+ +F  M+R+GL  + +T+V+ L AC       LG ++ 
Sbjct: 265 NVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQ 324

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
             T+K+  +  ++VANA + M+++ G + +A  +   +  KD+VSWN++L G   N+   
Sbjct: 325 CVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDE 384

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+   + +   G  PD+V     ++A   +     GK++H  A+K    S+  +G++L+
Sbjct: 385 EAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLI 444

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           D Y+K   V    +V  Q+ A   +    +IAG  QNN   +A++LF+ V  +GL     
Sbjct: 445 DFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSF 504

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNI-DYSRNVFE 420
              S+L  C+GL      K++H Y ++ G    D  +  ++V  Y K     D ++ + E
Sbjct: 505 TFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIE 564

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
             + K++V WT+++S Y  NG + ++L  F+ M   +V  D +T  S L A S ++ L  
Sbjct: 565 MPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSD 624

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANG 539
           GKE++G II+ GF    +  S+++DMY++CG +  + + F  +++K D+ LW SMI    
Sbjct: 625 GKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFA 684

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            +G    A+ LF KM+      D +TFL +L AC+H+GLI+EG+ + + M   Y + P  
Sbjct: 685 KNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRV 744

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           +HYAC +DLLGR  HL+EA + +  +   P   +W   L ACR+H ++E GEI AK+L+E
Sbjct: 745 DHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVE 804

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P N   YVL+SN++AA+  W + +  R  MR  G  K PG SWI +GNK   F+ +DK
Sbjct: 805 LEPQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKFPGCSWITVGNKTSLFLVQDK 864

Query: 720 SHSESDEIYKKLAEITEKLER 740
           +H  +  IY+ L  +T  + +
Sbjct: 865 NHLGALRIYEMLDNLTRMMHK 885



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 169/599 (28%), Positives = 300/599 (50%), Gaps = 14/599 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + DA  +FD   ++ V  WNAML   V N   +  ++ +  M+ LG+  D FT
Sbjct: 244 LYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFT 303

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+ ACA L     G ++  + +K   D++ F+ N+ + M++K      A+ LF+ + 
Sbjct: 304 YVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLIT 363

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V WN+++   + + +  EA+ + + M   G+  +  +F   + AC +      G 
Sbjct: 364 YK-DTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGK 422

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   +K        V ++LI  Y++ G +     VL Q++    V  N ++ G VQN+
Sbjct: 423 QIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNN 482

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS-DLQIG 299
              +A+  F+++   G KP      + +S    L + + GK++H Y +K GF++ D  +G
Sbjct: 483 REDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVG 542

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            +L+  Y K        ++  +M   ++ + WT I++GYAQN    ++L  F  ++   +
Sbjct: 543 VSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDV 602

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRN 417
             D +   S+L ACS +  +S  KEIHG II+ G        +AI+D+Y KCG+I  S  
Sbjct: 603 HPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFE 662

Query: 418 VFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            F+ ++SK D+  W SMI  +  NG A+EAL LF  M ++ ++SD +T +  L A +   
Sbjct: 663 AFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAG 722

Query: 477 ILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSM 534
           ++ +G+   +      G        +  +D+  R G L  A +V N +  + D ++W + 
Sbjct: 723 LISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATY 782

Query: 535 INANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           + A  +H    RG++A     ++E ++ +      L+ +YA   +G   E K   E MR
Sbjct: 783 LAACRMHKDEERGEIAAKELVELEPQNSST--YVLLSNMYAA--AGNWVEAKMAREAMR 837



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/642 (24%), Positives = 309/642 (48%), Gaps = 40/642 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG V DA ++F  +S      W +M+  Y   G     +  ++RM  +G S D  T
Sbjct: 75  MYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVT 134

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ A   L  L+                                    AR L  RM 
Sbjct: 135 CVAVVCALTALGRLE-----------------------------------DARTLLHRMP 159

Query: 121 EKEDVVLWNSIISAYS-ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
                V WN++IS Y+  SG   E  GL+++M+  GL     TF + L A  +++    G
Sbjct: 160 APSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEG 219

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++HAA V+ G +  V+V ++LI +YA+CG + +A  V      K+ V WN+ML G V+N
Sbjct: 220 RQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRN 279

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +   +A+Q F  ++  G + D+   V+ + A   L +   G+++    IK    + L + 
Sbjct: 280 EYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVA 339

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N  +DM++K   ++    +F  +T +D +SW  ++ G   N    +A+ + + + L+G+ 
Sbjct: 340 NATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVT 399

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D +   +V+ ACS ++     K+IH   ++  + S+  + ++++D Y K G+++  R V
Sbjct: 400 PDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKV 459

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
              +++  +V    +I+  V N   +EA++LF  +    ++  S T  S LS  + L   
Sbjct: 460 LAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSS 519

Query: 479 KKGKELNGFIIRKGF-NLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMIN 536
             GK+++ + ++ GF N + SV  SLV  Y +    + ANK+       K+L+ WT++++
Sbjct: 520 IIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVS 579

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
               +G    ++  F++M +    PD +TF ++L ACS    +++GK+   ++       
Sbjct: 580 GYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLI-IKSGFG 638

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
            +    + ++D+  +   +  +++  + ++ +    +W +++
Sbjct: 639 SYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMI 680



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 261/540 (48%), Gaps = 43/540 (7%)

Query: 42  VLETYSRMRVL----GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN 97
           VL+ + R R      G+  D F     + AC+ L  L  G + H    K G  S  F   
Sbjct: 11  VLDAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAA 70

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
           +LV MYA+C     AR++F  +    D V W S+IS Y  +G+  EA+ LF  M+++G  
Sbjct: 71  ALVNMYARCGRVGDARRVFGGI-SLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSS 129

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            +  T VA                               V  AL A+    G++ +A  +
Sbjct: 130 PDRVTCVA-------------------------------VVCALTAL----GRLEDARTL 154

Query: 218 LYQLENKDS-VSWNSMLTGFVQND-LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
           L+++    S V+WN++++G+ Q   +  +    +++++  G  P +    + +SA+    
Sbjct: 155 LHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANAT 214

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
             + G+++HA A++ G  +++ +G++L+++YAKC C+     VF     ++ + W  ++ 
Sbjct: 215 AFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLN 274

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-S 394
           G  +N   ++A+++F  ++  GL+AD     SVL AC+ L      +++    I+  + +
Sbjct: 275 GLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDA 334

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
            L + NA +D++ K G ID ++ +F  I  KD VSW +++    HN    EA+ +   MN
Sbjct: 335 SLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMN 394

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              V  D ++  + ++A S++   + GK+++   ++       +V SSL+D Y++ G ++
Sbjct: 395 LDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVE 454

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
              KV   V    ++    +I     + R   AIDLF ++  +   P   TF ++L  C+
Sbjct: 455 SCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCT 514



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 86/183 (46%)

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           V  D   L + LSA S L  L  GK+ +    ++G       A++LV+MYARCG +  A 
Sbjct: 27  VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           +VF  +   D + W SMI+     GR + A+ LF +ME    +PD +T +A++ A +  G
Sbjct: 87  RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALG 146

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
            + + +  L  M        W    +      G  + +   Y+ +R   + PT   + ++
Sbjct: 147 RLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASM 206

Query: 638 LGA 640
           L A
Sbjct: 207 LSA 209


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/671 (34%), Positives = 383/671 (57%), Gaps = 7/671 (1%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
            ++H   LK G     F+V  L  +YA+      A +LF+    K  V LWN+++ +Y  
Sbjct: 21  PQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKT-VYLWNALLRSYFL 79

Query: 138 SGQCLEALGLFREMQRVGLV---TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
            G+ +E L LF +M    +     + YT   AL++C       LG  IH    K   +  
Sbjct: 80  EGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDND 139

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           ++V +ALI +Y++CG+M +A  V  +   +D V W S++TG+ QN     A+ FF  +  
Sbjct: 140 MFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVV 199

Query: 255 AGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
             Q  PD V  V+A SA  +L +   G+ +H +  ++GF + L + N+++++Y K   + 
Sbjct: 200 LEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIR 259

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
               +F +M  +D ISW++++A YA N     AL LF  +  + ++ + + + S L AC+
Sbjct: 260 SAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACA 319

Query: 374 GLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
               + + K IH   +  G   D+ +  A++D+Y KC +   + ++F  +  KDVVSW  
Sbjct: 320 SSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAV 379

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           + S Y   G+A+++L +F  M       D+I LV  L+A+S L I+++   L+ F+ + G
Sbjct: 380 LFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSG 439

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           F+    + +SL+++YA+C ++D ANKVF  ++ KD++ W+S+I A G HG+G+ A+ LFY
Sbjct: 440 FDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFY 499

Query: 553 KMEAES-FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
           +M   S   P+ +TF+++L ACSH+GLI EG K   +M  +YQL P  EHY  +VDLLGR
Sbjct: 500 QMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGR 559

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
              L++A   +  M ++    VW ALLGACR+H N ++GE+ A  L  LDP + G Y L+
Sbjct: 560 MGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLL 619

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           SN++   + W D  ++R  ++ +  KK  G S +EI N++HSFIA D+ H ESD+IY  L
Sbjct: 620 SNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYGML 679

Query: 732 AEITEKLEREG 742
            ++  +++ EG
Sbjct: 680 RKLDARMKEEG 690



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 170/583 (29%), Positives = 305/583 (52%), Gaps = 21/583 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS---VD 57
           +Y +  S+  A +LF++   +TV+ WNA+L +Y   G+ +  L  + +M    I+    D
Sbjct: 45  LYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPD 104

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            +T    +K+C+ L+ L+ G  IHG + K   D+  F+ ++L+ +Y+KC     A ++F 
Sbjct: 105 NYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFT 164

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFE 176
               K+DVVLW SII+ Y  +G    AL  F  M  +  V+ +  T V+A  AC   S  
Sbjct: 165 EY-PKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDF 223

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            LG  +H    + G + ++ +AN+++ +Y + G +  AA +  ++  KD +SW+SM+  +
Sbjct: 224 NLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACY 283

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             N     A+  F E+     + ++V  ++A+ A     NL  GK +H  A+  GF  D+
Sbjct: 284 ADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDI 343

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +   LMDMY KC        +F +M  +D +SW  + +GYA+     K+L +F  +   
Sbjct: 344 TVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSY 403

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYS 415
           G   D + +  +L A S L  + Q   +H ++ + G  +   + A ++++Y KC +ID +
Sbjct: 404 GTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNA 463

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM-NEANVESDSITLVSALSAASS 474
             VF+ +  KDVV+W+S+I++Y  +G   EAL+LFY M N ++V+ + +T VS LSA S 
Sbjct: 464 NKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSH 523

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASS--LVDMYARCGALDIANKVFNCVQTK-DLILW 531
             ++++G ++   ++ + + L  +      +VD+  R G LD A  + N +  +    +W
Sbjct: 524 AGLIEEGIKMFHVMVNE-YQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVW 582

Query: 532 TSMINANGLHGRGKV----AIDLFYKMEAESFAPDHITFLALL 570
            +++ A  +H   K+    A++LF         P+H  +  LL
Sbjct: 583 GALLGACRIHQNIKIGELAALNLFL------LDPNHAGYYTLL 619


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/567 (40%), Positives = 340/567 (59%), Gaps = 8/567 (1%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  GK++H    K GF     +GN+++DMY+KC  V    RVF  +  ++ ISW  +IAG
Sbjct: 20  LDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAG 79

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG---L 393
           Y       +AL LFR ++ +G   D     S L ACS      +  +IH  +IR G   L
Sbjct: 80  YTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYL 139

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
           +   +  A+VD+Y KC  +  +R VF+ IE K V+SW+++I  Y       EA++LF  +
Sbjct: 140 AQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFREL 199

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL-EGSVASSLVDMYARCGA 512
            E+    D   L S +   +  ++L++GK+++ + I+  + L E SVA+S++DMY +CG 
Sbjct: 200 RESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGL 259

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
              A+ +F  +  ++++ WT MI   G HG G  A++LF +M+     PD +T+LA+L A
Sbjct: 260 TVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSA 319

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CSHSGLI EGKK+  I+  + ++ P  EHYAC+VDLLGR   L+EA   +  M ++P   
Sbjct: 320 CSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVG 379

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           +W  LL  CR+H + E+G+ V + LL  +  NP NYV++SN++A +  WK+ E++R  ++
Sbjct: 380 IWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETLK 439

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
             GLKK  G SW+E+  +IH F   D  H   +EI++ L E+ ++++ E GYV    F L
Sbjct: 440 RKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYVHSINFSL 499

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGV----LKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
           H+VEEE K++ L  HSE+LAI   +    LK     +IRI KNLRVC DCH+F K +S++
Sbjct: 500 HDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVCGDCHAFIKGLSKV 559

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
                VVRDANRFH FE G+CSCGDYW
Sbjct: 560 LKIAFVVRDANRFHRFENGLCSCGDYW 586



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 211/389 (54%), Gaps = 29/389 (7%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++  C+  + LD G ++HG+V K G+D    + NS++ MY+KC    +A ++F+ +  + 
Sbjct: 10  ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVR- 68

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +V+ WN++I+ Y+      EAL LFREM+  G V + YT+ ++L+AC  +     GM+IH
Sbjct: 69  NVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIH 128

Query: 184 AATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           AA ++ G     Q  VA AL+ +Y +C +M EA  V  ++E K  +SW++++ G+ Q D 
Sbjct: 129 AALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDN 188

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIGN 300
             +AM  FREL+ +  + D     + +        L  GK++HAY IK  + + ++ + N
Sbjct: 189 LKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVAN 248

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +++DMY KC        +F +M  ++ +SWT +I GY ++    KA+ELF  +Q  G++ 
Sbjct: 249 SVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEP 308

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------------IVDVYG 407
           D +   +VL ACS           H  +I++G     IL +             +VD+ G
Sbjct: 309 DSVTYLAVLSACS-----------HSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLG 357

Query: 408 KCGNIDYSRNVFESIESKDVVS-WTSMIS 435
           + G +  ++N+ E +  K  V  W +++S
Sbjct: 358 RGGRLKEAKNLIEKMPLKPNVGIWQTLLS 386



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 226/433 (52%), Gaps = 13/433 (3%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L  C        G ++H    K G ++   V N++I MY++CG + EAA V   L  ++ 
Sbjct: 11  LNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNV 70

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           +SWN+M+ G+       +A+  FRE++  G+ PD     +++ A         G ++HA 
Sbjct: 71  ISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAA 130

Query: 287 AIKQGF--VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
            I+ GF  ++   +   L+D+Y KC  +    +VF ++  +  +SW+T+I GYAQ +   
Sbjct: 131 LIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLK 190

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAI 402
           +A++LFR ++      D  ++ S++   +    + Q K++H Y I+   GL ++ + N++
Sbjct: 191 EAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSV 250

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +D+Y KCG    +  +F  +  ++VVSWT MI+ Y  +G+ N+A+ELF  M E  +E DS
Sbjct: 251 LDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDS 310

Query: 463 ITLVSALSAASSLSILKKGKELNGFII-RKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
           +T ++ LSA S   ++K+GK+    +   +    +    + +VD+  R G L  A  +  
Sbjct: 311 VTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIE 370

Query: 522 CVQTKDLI-LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            +  K  + +W ++++   +HG    GK   ++  + E  +  P +   ++ +YA  H+G
Sbjct: 371 KMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNN--PANYVMVSNMYA--HAG 426

Query: 578 LINEGKKFLEIMR 590
              E +K  E ++
Sbjct: 427 YWKESEKIRETLK 439



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 152/285 (53%), Gaps = 4/285 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V +A ++F+ +  R V +WNAM+  Y +       L  +  MR  G   D +T
Sbjct: 48  MYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYT 107

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           +   +KAC+       G +IH  +++ G  Y +   +  +LV +Y KC    +AR++FDR
Sbjct: 108 YSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDR 167

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           + EK  V+ W+++I  Y+      EA+ LFRE++      + +   + +    D +    
Sbjct: 168 IEEK-SVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQ 226

Query: 179 GMEIHAATVKSGQN-LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           G ++HA T+K     L++ VAN+++ MY +CG   EA  +  ++  ++ VSW  M+TG+ 
Sbjct: 227 GKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYG 286

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           ++ +  KA++ F E+Q  G +PD V  +  +SA    G +  GK+
Sbjct: 287 KHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKK 331



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 2/180 (1%)

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
           S+S  L   L+  S   +L +GK+++G + + GF++   V +S++DMY++CG +  A +V
Sbjct: 2   SESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARV 61

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           FN +  +++I W +MI        G+ A++LF +M  +   PD  T+ + L ACS +   
Sbjct: 62  FNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAA 121

Query: 580 NEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
            EG +    ++R  +           LVDL  +   + EA +    ++ E +   W  L+
Sbjct: 122 GEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIE-EKSVMSWSTLI 180


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/691 (34%), Positives = 383/691 (55%), Gaps = 38/691 (5%)

Query: 182 IHAATVKSGQNLQVYVANALIA---MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           IHA  +K+G +   Y  + L+    +      +  A  V   ++  + + WN+M  G   
Sbjct: 21  IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A++ +  +   G  P+       + +  +L     G+++H + +K G+  DL +
Sbjct: 81  SSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYV 140

Query: 299 GNTLMDMYAK-----------------------CCCVNYMGR--------VFYQMTAQDF 327
             +L+ MY K                            Y  R        +F ++  +D 
Sbjct: 141 HTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDV 200

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW  II+GYA    + +AL+LF+ +    +  D   + +V+ AC+    +   +++H +
Sbjct: 201 VSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSW 260

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           I   GL S+L I+NA++D+Y KCG ++ +  +F+ + +KDV+SW +MI  Y H  L  EA
Sbjct: 261 IDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEA 320

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR--KGFNLEGSVASSLV 504
           L LF  M  +    + +T++S L A + L  +  G+ ++ +I +  KG     S+ +SL+
Sbjct: 321 LLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLI 380

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMYA+CG ++ A++VFN +  + L    +MI    +HGR   A D+F +M      PD I
Sbjct: 381 DMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 440

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF+ LL ACSHSG+++ G++    M  +Y++ P  EHY C++DLLG     +EA + + +
Sbjct: 441 TFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINT 500

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M +EP   +WC+LL AC++H N ELGE  A+KL++++P NPG+YVL+SN++A + +W +V
Sbjct: 501 MTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEV 560

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
             +R  +   G+KK PG S IEI + +H FI  DK H  + EIY  L E  E L  E G+
Sbjct: 561 ANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE-MEVLLEEAGF 619

Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
           V  T  VL  +EEE K   L  HSE+LAIA+G++ +  G+ + I KNLRVC +CH   KL
Sbjct: 620 VPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 679

Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +S+++ RE++ RD  RFHHF  GVCSC DYW
Sbjct: 680 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 273/557 (49%), Gaps = 56/557 (10%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDF---RKARQLFDRMG 120
           ++  C  L+ L     IH  ++K G  +T++ ++ L+       +F     A  +F+ + 
Sbjct: 8   LLHNCKTLQSLRI---IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQ 64

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  ++++WN++   ++ S   + A+ L+  M  +GL+ N+YTF   L++C        G 
Sbjct: 65  EP-NLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQ 123

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV----------------------- 217
           +IH   +K G  L +YV  +LI+MY + G+  +A  V                       
Sbjct: 124 QIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRG 183

Query: 218 --------LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
                     ++  KD VSWN++++G+       +A+  F+E+     KPD+   V  VS
Sbjct: 184 YIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVS 243

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A  + G++  G+++H++    G  S+L+I N L+D+Y+KC  V     +F  ++ +D IS
Sbjct: 244 ACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVIS 303

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W T+I GY   N + +AL LF+ +   G + + + + S+L AC+ L  +   + IH YI 
Sbjct: 304 WNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYID 363

Query: 390 R--KGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           +  KG+++   L  +++D+Y KCG+I+ +  VF S+  + + +  +MI  +  +G AN A
Sbjct: 364 KRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAA 423

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL-----NGFIIRKGFNLEGSVAS 501
            ++F  M +  +E D IT V  LSA S   +L  G+ +       + I       G    
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYG---- 479

Query: 502 SLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAE 557
            ++D+    G    A ++ N +  + D ++W S++ A  +HG    G+       K+E E
Sbjct: 480 CMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPE 539

Query: 558 SFAPDHITFLALLYACS 574
           +  P     L+ +YA +
Sbjct: 540 N--PGSYVLLSNIYATA 554



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 233/498 (46%), Gaps = 74/498 (14%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F+ + +  +  WN M   +  + +P+  ++ Y  M  LG+  +++TFP ++K+CA 
Sbjct: 56  AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------- 123
           LK    G +IHG VLK GY+   ++  SL++MY K   ++ A ++FD    ++       
Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTAL 175

Query: 124 -----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
                                  DVV WN+IIS Y+ +G   EAL LF+EM +  +  + 
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            T V  + AC  S    LG ++H+     G    + + NALI +Y++CG++  A G+   
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           L NKD +SWN+M+ G+   +LY +A+  F+E+  +G+ P+ V  ++ + A  +LG +  G
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG 355

Query: 281 KELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           + +H Y  K  +G  +   +  +L+DMYAKC  +    +VF  M  +   +   +I G+A
Sbjct: 356 RWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFA 415

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
            +     A ++F  ++  G++ D +    +L ACS                         
Sbjct: 416 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS------------------------- 450

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIE-----SKDVVSWTSMISSYVHNGLANEALELFYLM 453
                      G +D  R +F S+      +  +  +  MI    H GL  EA E   ++
Sbjct: 451 ---------HSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEE---MI 498

Query: 454 NEANVESDSITLVSALSA 471
           N   +E D +   S L A
Sbjct: 499 NTMTMEPDGVIWCSLLKA 516



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 132/284 (46%), Gaps = 3/284 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A+++FD++  + V +WNA++  Y   G     L+ +  M    +  D  T 
Sbjct: 179 YASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTM 238

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA    +  G ++H  +   G  S   IVN+L+ +Y+KC +   A  LF  +  
Sbjct: 239 VTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSN 298

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN++I  Y+      EAL LF+EM R G   N  T ++ L AC        G  
Sbjct: 299 K-DVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRW 357

Query: 182 IHAATVK--SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           IH    K   G      +  +LI MYA+CG +  A  V   + ++   + N+M+ GF  +
Sbjct: 358 IHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMH 417

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
                A   F  ++  G +PD +  V  +SA    G L  G+ +
Sbjct: 418 GRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRI 461



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 107/239 (44%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  LF  +S + V +WN M+G Y         L  +  M   G + +  T
Sbjct: 279 LYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVT 338

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++ ACA L  +D G  IH  + K   G  +   +  SL+ MYAKC D   A Q+F+ 
Sbjct: 339 MLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 398

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  +  +   N++I  ++  G+   A  +F  M++ G+  +  TFV  L AC  S    L
Sbjct: 399 MHHRT-LSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDL 457

Query: 179 GMEIHAATV---KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           G  I  +     K    L+ Y    +I +    G   EA  ++  +    D V W S+L
Sbjct: 458 GRRIFRSMTQNYKITPKLEHY--GCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLL 514



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 3/142 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A Q+F+ +  RT+   NAM+  +  +G      + +SRMR  GI  D  T
Sbjct: 382 MYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDIT 441

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN--SLVAMYAKCYDFRKARQLFDR 118
           F  ++ AC+    LD G +I   + +  Y  T  + +   ++ +      F++A ++ + 
Sbjct: 442 FVGLLSACSHSGMLDLGRRIFRSMTQ-NYKITPKLEHYGCMIDLLGHLGLFKEAEEMINT 500

Query: 119 MGEKEDVVLWNSIISAYSASGQ 140
           M  + D V+W S++ A    G 
Sbjct: 501 MTMEPDGVIWCSLLKACKMHGN 522


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/721 (33%), Positives = 408/721 (56%), Gaps = 21/721 (2%)

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I+A    G+ L+AL L+ EM+  G+V + +   + + AC        G  +H   + +G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               + +  AL+ MYA+CG + +A  V   +E KD  +W+S++  + +      A+  +R
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            +   G +P+ V    A+     +  L +G+ +H   +      D  + ++L++MY KC 
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVL 369
            +    +VF  M A++  S+T +I+ Y Q   H +ALELF R  ++E ++ +     ++L
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            A  GL  + + +++H ++  +G  +++V+ NA+V +YGKCG+   +R VF+S+ +++V+
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           SWTSMI++Y  +G   EAL LF  M+   VE   ++  SAL+A + L  L +G+E++  +
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRV 357

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           +         + +SL+ MYARCG+LD A +VFN ++T+D     +MI A   HGR K A+
Sbjct: 358 VEANLA-SPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQAL 416

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
            ++ KME E    D ITF+++L ACSH+ L+ + + FL+ +  D+ + P  EHY C+VD+
Sbjct: 417 RIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDV 476

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
           LGR+  L +A + V +M  +  A  W  LL  C+ H + + GE  A+K+ EL P     Y
Sbjct: 477 LGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPY 536

Query: 669 VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA--RDKSHSESD- 725
           V +SN++AA++++ D  +VR  M   G+ +    S+IEI N++H F +  RD+     D 
Sbjct: 537 VFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDG 596

Query: 726 ----EIYKKLAEITEKLEREGGYVAQTQFVLHN----VEEEEKVQMLYGHSERLAIAYGV 777
                +   L E+ E + ++ GYV  T+ V         EEEK + L  HSERLAIAYG+
Sbjct: 597 RTMERVRSLLVELLEPM-KQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGL 655

Query: 778 LKST---EGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           + +    +   +R+  + RVC  CHS  KL+S +  + + VRD +RFHHFE G CSCGD+
Sbjct: 656 IAAKDPDDSRPLRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGDH 715

Query: 835 W 835
           W
Sbjct: 716 W 716



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 155/552 (28%), Positives = 286/552 (51%), Gaps = 12/552 (2%)

Query: 29  MLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
           M+ A V  G PL+ LE +  M   GI  D F    ++ AC  L+ L+ G ++H  ++  G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
           + +   +  +L+ MYAKC     A+++F+ M E +D+  W+SII+AY+ +G+   A+ L+
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGM-EIKDLFAWSSIIAAYARAGRGEMAVVLY 119

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
           R M   G+  N  TF  AL  C   +    G  IH   + S       + ++L+ MY +C
Sbjct: 120 RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC 179

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA-GQKPDQVCTVNA 267
            +M EA  V   ++ ++  S+ +M++ +VQ   + +A++ F  +      +P+       
Sbjct: 180 DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATI 239

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           + A   LGNL  G+++H +   +GF +++ + N L+ MY KC       +VF  MTA++ 
Sbjct: 240 LGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNV 299

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           ISWT++IA YAQ+    +AL LF+ + +E      +   S L AC+ L  + + +EIH  
Sbjct: 300 ISWTSMIAAYAQHGNPQEALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHR 356

Query: 388 IIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           ++   L+   +  +++ +Y +CG++D +R VF  ++++D  S  +MI+++  +G   +AL
Sbjct: 357 VVEANLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQAL 416

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDM 506
            ++  M +  + +D IT VS L A S  S++   ++ L   ++  G          +VD+
Sbjct: 417 RIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDV 476

Query: 507 YARCGALDIANKVFNCVQTK-DLILWTSMINANGLHG---RGKVAIDLFYKMEAESFAPD 562
             R G L  A ++   +  + D + W ++++    HG   RG+ A    +++      P 
Sbjct: 477 LGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLP- 535

Query: 563 HITFLALLYACS 574
              FL+ +YA +
Sbjct: 536 -YVFLSNMYAAA 546



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 234/445 (52%), Gaps = 9/445 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA+++F+ +  + +F W++++ AY   G     +  Y RM   G+  +  T
Sbjct: 74  MYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVT 133

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F C +  CA +  L  G  IH  +L       D + +SL+ MY KC +  +AR++F+ M 
Sbjct: 134 FACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMK 193

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLG 179
            + +V  + ++ISAY  +G+  EAL LF  M +V  +  NAYTF   L A E       G
Sbjct: 194 AR-NVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKG 252

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H      G +  V V NAL+ MY +CG   EA  V   +  ++ +SW SM+  + Q+
Sbjct: 253 RKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQH 312

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  F+ +     +P  V   +A++A   LG L  G+E+H   ++    S  Q+ 
Sbjct: 313 GNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASP-QME 368

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            +L+ MYA+C  ++   RVF +M  +D  S   +IA + Q+    +AL ++R ++ EG+ 
Sbjct: 369 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIP 428

Query: 360 ADVMIIGSVLMACSGLKCMSQTKE-IHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRN 417
           AD +   SVL+ACS    ++  ++ +   ++  G+  LV     +VDV G+ G +  +  
Sbjct: 429 ADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEE 488

Query: 418 VFESIESK-DVVSWTSMISSYVHNG 441
           + E++  + D V+W +++S    +G
Sbjct: 489 LVETMPYQADAVAWMTLLSGCKRHG 513


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/642 (35%), Positives = 390/642 (60%), Gaps = 5/642 (0%)

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           + N LI  Y +CG +  A  V  ++ ++  V+WNSM+  +++N    +A+  ++ +   G
Sbjct: 112 LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDG 171

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIGNTLMDMYAKCCCVNYM 315
             PD+    +   A   LG +  G+  H  ++  G  VS++ +G+ L+DMYAK   +   
Sbjct: 172 ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA 231

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
             V  Q+  +D + +T +I GY+ +    ++L++FR +  +G++A+   + SVL+ C  L
Sbjct: 232 RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNL 291

Query: 376 KCMSQTKEIHGYIIRKGLSDLVI-LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           + ++  + IHG I++ GL   V    +++ +Y +CG +D S  VF+   + + V+WTS+I
Sbjct: 292 EDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVI 351

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
              V NG    AL  F  M  +++  +S TL S L A SSL++L++GK+++  +++ G +
Sbjct: 352 VGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD 411

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
           ++  V ++L+D Y +CG+ +IA  VFN +   D++   SMI +   +G G  A+ LF  M
Sbjct: 412 IDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGM 471

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
           +     P+++T+L +L AC+++GL+ EG       R    ++   +HYAC+VDLLGRA  
Sbjct: 472 KDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGR 531

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNV 674
           L+EA   +  + I     +W  LL ACR+H + E+ + V  ++++L P + G +VL+SN+
Sbjct: 532 LKEAEMLINQVNISDVV-IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNL 590

Query: 675 FAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
           +A++  W  V +++  MR   LKK P  SW+++  +IH+F+A D SH    +I +KL E+
Sbjct: 591 YASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEEL 650

Query: 735 TEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKST-EGSLIRITKNLR 793
            EK+ +E GYV  T+FVL +++EE+K++ LY HSE+LA+A+ + +S  + + IRI KNLR
Sbjct: 651 IEKV-KELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLR 709

Query: 794 VCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           VC DCH++ K VS++ GR+++ RD  RFHHF  G+CSCGDYW
Sbjct: 710 VCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 260/490 (53%), Gaps = 6/490 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +I+ C  +K +    KI    LK G+  +  + N L+  Y KC     AR++FD + 
Sbjct: 80  YSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVP 137

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  +V WNS+I++Y  +G+  EA+ +++ M   G++ + +TF +  +A  D      G 
Sbjct: 138 HRH-IVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQ 196

Query: 181 EIHAATVKSGQNL-QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             H  +V  G  +  V+V +AL+ MYA+ GKM +A  V  Q+  KD V + +++ G+  +
Sbjct: 197 RAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHH 256

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +++Q FR +   G + ++    + +   G L +L +G+ +H   +K G  S +   
Sbjct: 257 GEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQ 316

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            +L+ MY +C  V+   +VF Q    + ++WT++I G  QN     AL  FR +    + 
Sbjct: 317 TSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSIT 376

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            +   + SVL ACS L  + Q K+IH  +++ GL  D  +  A++D YGKCG+ + +R+V
Sbjct: 377 PNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSV 436

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  +   DVVS  SMI SY  NG  +EAL+LF  M +  +E +++T +  LSA ++  +L
Sbjct: 437 FNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLL 496

Query: 479 KKGKELNGFIIRKG-FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           ++G  +       G   L     + +VD+  R G L  A  + N V   D+++W ++++A
Sbjct: 497 EEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSA 556

Query: 538 NGLHGRGKVA 547
             +HG  ++A
Sbjct: 557 CRIHGDVEMA 566



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 143/439 (32%), Positives = 223/439 (50%), Gaps = 6/439 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCGSV+ A ++FD+V  R +  WN+M+ +Y+ NG     ++ Y RM   GI  D FTF
Sbjct: 120 YLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTF 179

Query: 62  PCVIKACAMLKDLDCGAKIHG--LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
             V KA + L  +  G + HG  +VL  G  S  F+ ++LV MYAK    R AR + D++
Sbjct: 180 SSVFKAFSDLGLVHEGQRAHGQSVVLGVGV-SNVFVGSALVDMYAKFGKMRDARLVSDQV 238

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K DVVL+ ++I  YS  G+  E+L +FR M + G+  N YT  + L  C +    T G
Sbjct: 239 VGK-DVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSG 297

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH   VK+G    V    +L+ MY RCG + ++  V  Q  N + V+W S++ G VQN
Sbjct: 298 RLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQN 357

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A+  FR++  +   P+     + + A   L  L  GK++HA  +K G   D  +G
Sbjct: 358 GREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVG 417

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L+D Y KC        VF  +   D +S  ++I  YAQN    +AL+LF  ++  GL+
Sbjct: 418 AALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLE 477

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN--AIVDVYGKCGNIDYSRN 417
            + +    VL AC+    + +   I       G  +L   +   +VD+ G+ G +  +  
Sbjct: 478 PNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEM 537

Query: 418 VFESIESKDVVSWTSMISS 436
           +   +   DVV W +++S+
Sbjct: 538 LINQVNISDVVIWRTLLSA 556



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 176/384 (45%), Gaps = 19/384 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + DA  + D+V  + V  + A++  Y  +GE    L+ +  M   GI  + +T
Sbjct: 221 MYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYT 280

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+  C  L+DL  G  IHGL++K G +S      SL+ MY +C     + ++F +  
Sbjct: 281 LSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFI 340

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
               V  W S+I     +G+   AL  FR+M R  +  N++T  + L+AC   +    G 
Sbjct: 341 NPNQVT-WTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGK 399

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  +K G ++  YV  ALI  Y +CG    A  V   L   D VS NSM+  + QN 
Sbjct: 400 QIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNG 459

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+Q F  ++  G +P+ V  +  +SA    G L  G  + + A   G +   +   
Sbjct: 460 FGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTK--- 516

Query: 301 TLMDMYAKCCCVNYMGR---------VFYQMTAQDFISWTTIIAG-YAQNNCHLKALELF 350
              D YA  C V+ +GR         +  Q+   D + W T+++      +  +    + 
Sbjct: 517 ---DHYA--CMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMN 571

Query: 351 RTVQLEGLDADVMIIGSVLMACSG 374
           R + L   D    ++ S L A +G
Sbjct: 572 RVIDLAPEDGGTHVLLSNLYASTG 595



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           +++GF+   S+ + L+D Y +CG++  A KVF+ V  + ++ W SMI +   +GR K AI
Sbjct: 104 LKRGFH--HSLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAI 161

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
           D++ +M  +   PD  TF ++  A S  GL++EG++
Sbjct: 162 DIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/702 (33%), Positives = 386/702 (54%), Gaps = 49/702 (6%)

Query: 182  IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            +HA +VK+G    +  AN L+ +Y +   M  A  +  ++  +++ +W  +++GF +   
Sbjct: 311  LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370

Query: 242  YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
                 + FRE++  G  P+Q    +         NL  GK +HA+ ++ G  +D+ +GN+
Sbjct: 371  SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430

Query: 302  LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR------TVQL 355
            ++D+Y KC    Y  RVF  M   D +SW  +I+ Y +     K+L++FR       V  
Sbjct: 431  ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 356  EGLDADVMIIGSVLMACSGLKCMSQT-------------------------KEIHGYIIR 390
              +   +M  G    A   L CM +                          +++HG +++
Sbjct: 491  NTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLK 550

Query: 391  KGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE----------------SKDVVSWTSM 433
             G   D  I +++V++Y KCG +D +  V + +                    +VSW  M
Sbjct: 551  FGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLM 610

Query: 434  ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
            +S YV NG   + L+ F LM    V  D  T+ + +SA ++  IL+ G+ ++ +  + G 
Sbjct: 611  VSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGH 670

Query: 494  NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
             ++  V SSL+DMY++ G+LD A  +F      +++ WTSMI+   LHG+GK AI LF +
Sbjct: 671  RIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEE 730

Query: 554  MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
            M  +   P+ +TFL +L AC H+GL+ EG ++  +M+  Y ++P  EH   +VDL GRA 
Sbjct: 731  MLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAG 790

Query: 614  HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISN 673
            HL E   F+    I     VW + L +CR+H N E+G+ V++ LL++ P +PG YVL+SN
Sbjct: 791  HLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSN 850

Query: 674  VFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
            + A++ +W +  +VR  M   G+KK PG SWI++ ++IH+FI  D+SH + +EIY  L  
Sbjct: 851  MCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDI 910

Query: 734  ITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLR 793
            +  +L +E GY    + V+ +VEEE+   ++  HSE+LA+ +G++ +   + IRI KNLR
Sbjct: 911  LIGRL-KEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLR 969

Query: 794  VCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +C DCH+F K  S+L  RE+++RD +RFHHF+ G CSCGDYW
Sbjct: 970  ICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 225/491 (45%), Gaps = 61/491 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K  ++  A +LFD++ QR   TW  ++  +   G    V + +  MR  G   + +T
Sbjct: 333 LYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYT 392

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              + K C++  +L  G  +H  +L+ G D+   + NS++ +Y KC  F  A ++F+ M 
Sbjct: 393 LSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMN 452

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT---------------------- 158
           E  DVV WN +ISAY  +G   ++L +FR +    +V+                      
Sbjct: 453 EG-DVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLY 511

Query: 159 ---------NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
                    +  TF  AL      S   LG ++H   +K G     ++ ++L+ MY +CG
Sbjct: 512 CMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCG 571

Query: 210 KMTEAAGVLYQ-----LENKDS-----------VSWNSMLTGFVQNDLYCKAMQFFRELQ 253
           +M  A+ VL       L+N ++           VSW  M++G+V N  Y   ++ FR + 
Sbjct: 572 RMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMV 631

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
                 D       +SA    G L  G+ +HAY  K G   D  +G++L+DMY+K   ++
Sbjct: 632 RELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLD 691

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC- 372
               +F Q    + + WT++I+G A +    +A+ LF  +  +G+  + +    VL AC 
Sbjct: 692 DAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACC 751

Query: 373 ------SGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN-VFESIESK 425
                  G +     K+   Y I  G+       ++VD+YG+ G++  ++N +FE+  S 
Sbjct: 752 HAGLLEEGCRYFRMMKD--AYCINPGVEH---CTSMVDLYGRAGHLTETKNFIFENGISH 806

Query: 426 DVVSWTSMISS 436
               W S +SS
Sbjct: 807 LTSVWKSFLSS 817



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 143/597 (23%), Positives = 262/597 (43%), Gaps = 89/597 (14%)

Query: 7   SVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCV-I 65
           +V+    L  K+SQR+V T   +L                     LG SV ++ +P + +
Sbjct: 252 AVVGGSMLASKISQRSVATVGGLL--------------------FLGFSVSSYFYPPLWL 291

Query: 66  KACAMLKDLDCGAK-----IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           ++C++              +H L +K G   T    N L+ +Y K  +   AR+LFD + 
Sbjct: 292 QSCSLFHSTISNGPPPLGTLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIP 351

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ +   W  +IS +S +G       LFREM+  G   N YT  +  + C       LG 
Sbjct: 352 QR-NTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGK 410

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLTGFVQN 239
            +HA  +++G +  V + N+++ +Y +C K+ E A  +++L N+ D VSWN M++ +++ 
Sbjct: 411 GVHAWMLRNGIDADVVLGNSILDLYLKC-KVFEYAERVFELMNEGDVVSWNIMISAYLRA 469

Query: 240 DLYCKAMQFFRELQ-------------------------------GAGQKPDQVCTVNAV 268
               K++  FR L                                  G +   V    A+
Sbjct: 470 GDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIAL 529

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF- 327
             S  L  +  G++LH   +K GF  D  I ++L++MY KC  ++    V   +   DF 
Sbjct: 530 ILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPL-DFL 588

Query: 328 ----------------ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
                           +SW  +++GY  N  +   L+ FR +  E +  D+  + +++ A
Sbjct: 589 KNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISA 648

Query: 372 CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           C+    +   + +H Y  + G   D  + ++++D+Y K G++D +  +F      ++V W
Sbjct: 649 CANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFW 708

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL-----N 485
           TSMIS    +G   +A+ LF  M    +  + +T +  L+A     +L++G        +
Sbjct: 709 TSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKD 768

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDLILWTSMINANGLH 541
            + I  G        +S+VD+Y R G L +  N +F    +    +W S +++  LH
Sbjct: 769 AYCINPGVEH----CTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLH 821


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/650 (35%), Positives = 370/650 (56%), Gaps = 39/650 (6%)

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
            +S+ +NS+L    ++      + F++ ++  G + D++     + A  ++  L  G EL
Sbjct: 77  PESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMEL 136

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           H +A K   +SD  +   LMDMYA C  +NY   VF +M+ +D ++W T+I  Y +    
Sbjct: 137 HGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLL 196

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII-------------- 389
            +A +LF  ++   +  D MI+ +++ AC     M   + I+ ++I              
Sbjct: 197 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTAL 256

Query: 390 ------------------RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
                             +  + +L +  A+V  Y K G +D +R +F+  E KD+V WT
Sbjct: 257 VTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWT 316

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           +MIS+Y  +    EAL +F  M  + ++ D +T++S +SA  +L  L K K ++ +    
Sbjct: 317 TMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLN 376

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           G      + ++L++MYA+CG LD A  VF  + T++++ W+SMINA  +HG    ++ LF
Sbjct: 377 GLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLF 436

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
            +M+ E+  P+ +TF+ +LY CSHSGL+ EGKK    M  +Y + P  EHY C+VDL GR
Sbjct: 437 AQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGR 496

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
           AN L EA + + SM + P   +W +L+ ACRVH   ELGE+ AK++L+L+P + G  VL+
Sbjct: 497 ANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLM 556

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           SN++A   +W  V  +R  M    + K  G S I++  K H F+  DK H +S+EIY KL
Sbjct: 557 SNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKL 616

Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL----KSTEGS--L 785
            E+  KL +  GYV     VL +VEEEEK  ++  HSE+LA+ +G++    +  +GS  +
Sbjct: 617 YEVVSKL-KLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGV 675

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           IRI KNLRVC DCH+F KLVS+++  E++VRD  RFH ++ G+CSC DYW
Sbjct: 676 IRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 252/497 (50%), Gaps = 44/497 (8%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A  LF  +    + +++NS++   S SG+    +  ++ ++ VG   +  +F   L+A  
Sbjct: 66  ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
             S    GME+H    K       +V   L+ MYA CG++  A  V  ++  +D V+WN+
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M+  + +  L  +A + F E++ +   PD++   N VSA GR GN+   + ++ + I+  
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEND 245

Query: 292 FVSDLQIGNTLMDMYAKCCCVNY-------------------------MGR------VFY 320
              D  +   L+ MYA   C++                           GR      +F 
Sbjct: 246 VRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFD 305

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
           Q   +D + WTT+I+ YA+++   +AL +F  +   G+  DV+ + SV+ AC  L  + +
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDK 365

Query: 381 TKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
            K +H Y    GL S L I NA++++Y KCG +D +R+VFE + +++VVSW+SMI+++  
Sbjct: 366 AKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAM 425

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           +G A+++L LF  M + NVE + +T V  L   S   ++++GK++   +  + +N+   +
Sbjct: 426 HGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDE-YNITPKI 484

Query: 500 A--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR---GKVAIDLFYK 553
                +VD++ R   L  A +V   +    ++++W S+++A  +HG    G++A     K
Sbjct: 485 EHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILK 544

Query: 554 MEAESFAPDHITFLALL 570
           +E     PDH   L L+
Sbjct: 545 LE-----PDHDGALVLM 556



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 219/471 (46%), Gaps = 43/471 (9%)

Query: 11  AEQLFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           A  LF  +S       +N++L     +GEP   +  Y R+R +G   D  +FP ++KA +
Sbjct: 66  ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
            +  L  G ++HG   K    S  F+   L+ MYA C     AR +FD M ++ DVV WN
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQR-DVVTWN 184

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           ++I  Y   G   EA  LF EM+   ++ +       + AC  +        I+   +++
Sbjct: 185 TMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEN 244

Query: 190 GQNLQVYVANALIAMYA-------------------------------RCGKMTEAAGVL 218
              +  ++  AL+ MYA                               + G++ +A  + 
Sbjct: 245 DVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIF 304

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
            Q E KD V W +M++ + ++D   +A++ F E+  +G KPD V  ++ +SA   LG L 
Sbjct: 305 DQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLD 364

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
             K +H Y    G  S L I N L++MYAKC  ++    VF +M  ++ +SW+++I  +A
Sbjct: 365 KAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFA 424

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG-----YIIRKGL 393
            +     +L LF  ++ E ++ + +    VL  CS    + + K+I       Y I   +
Sbjct: 425 MHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKI 484

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS-YVHNGL 442
                   +VD++G+   +  +  V ES+  + +VV W S++S+  VH  L
Sbjct: 485 EH---YGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGEL 532



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 169/390 (43%), Gaps = 35/390 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG +  A  +FD++SQR V TWN M+  Y   G      + +  M+   +  D   
Sbjct: 158 MYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMI 217

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMY--AKCYD-----FRK-- 111
              ++ AC    ++     I+  +++        ++ +LV MY  A C D     FRK  
Sbjct: 218 LCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMS 277

Query: 112 ----------------------ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                                 AR +FD+  E +D+V W ++ISAY+ S    EAL +F 
Sbjct: 278 VRNLFVSTAMVSGYSKAGRLDDARVIFDQT-EMKDLVCWTTMISAYAESDHPQEALRVFE 336

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EM   G+  +  T ++ + AC +         +H  T  +G    + + NALI MYA+CG
Sbjct: 337 EMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCG 396

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            +  A  V  ++  ++ VSW+SM+  F  +     ++  F +++    +P++V  V  + 
Sbjct: 397 GLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLY 456

Query: 270 ASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT-AQDF 327
                G +  GK++ A    +      ++    ++D++ +   +     V   M  A + 
Sbjct: 457 GCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNV 516

Query: 328 ISWTTIIAG-YAQNNCHLKALELFRTVQLE 356
           + W ++++         L  L   R ++LE
Sbjct: 517 VIWGSLMSACRVHGELELGELAAKRILKLE 546



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 5/264 (1%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIES- 424
           ++L   S  K ++  K++H +I+R  ++  L      +       N+ Y+ N+F SI   
Sbjct: 17  TILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSISPL 76

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
            + + + S++     +G     +  +  +       D I+    L A S +S L +G EL
Sbjct: 77  PESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMEL 136

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +GF  +     +  V + L+DMYA CG ++ A  VF+ +  +D++ W +MI      G  
Sbjct: 137 HGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLL 196

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYA 603
             A  LF +M+  +  PD +    ++ AC  +G +   +   + ++  D ++D       
Sbjct: 197 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMD--THLLT 254

Query: 604 CLVDLLGRANHLEEAYQFVRSMQI 627
            LV +   A  ++ A +F R M +
Sbjct: 255 ALVTMYAGAGCMDMAMEFFRKMSV 278


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/711 (35%), Positives = 393/711 (55%), Gaps = 13/711 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ K G + +A  +FDK+  +    WNAM+     +  P   LE + RM++ G  VD  +
Sbjct: 143 MFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVS 202

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK---CGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              +  A + L D+ C   IHG V++   CG      + NSL+ MY KC D   A+++FD
Sbjct: 203 ILNLAPAVSRLGDVGCCKSIHGYVVRRSICG-----VVSNSLIDMYCKCGDVHSAQRVFD 257

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           RMG ++DV  W ++++ Y  +G   E L L  +M+R  +  N    V AL    +     
Sbjct: 258 RMGVRDDVS-WATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLE 316

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G EI+   ++ G    + VA  ++ MYA+CG++ +A  +   LE +D V+W++ L+  V
Sbjct: 317 KGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALV 376

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           +     + +  F+ +Q  G KPD+      VS    + N+  GK +H YAIK    SD+ 
Sbjct: 377 ETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDIS 436

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ-NNCHLKALELFRTVQLE 356
           +  TL+ MY +     Y   +F +M  +D + W T+I G+ +  + HL ALE+F  +QL 
Sbjct: 437 MVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHL-ALEMFNRLQLS 495

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI-DY 414
           G+  D   +  +  AC+ +  +     +HG I + G  SD+ +  A++D+Y KCG++   
Sbjct: 496 GILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSV 555

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
            R    +   KD VSW  MI+ Y+HNG +NEA+  F  M   NV  + +T V+ L A S 
Sbjct: 556 ERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSY 615

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           LSIL++    +  IIR GF     + +SL+DMYA+CG L  + K F+ ++ KD I W +M
Sbjct: 616 LSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAM 675

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           ++A  +HG+G++A+ LF  M+  +   D ++++++L AC HSGLI EG      M   + 
Sbjct: 676 LSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHH 735

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           ++P  EHYAC+VDLLG A   +E    +  M  EP A VW ALL AC++HSN  LGE+  
Sbjct: 736 VEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAV 795

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
             LL+L+P NP ++V++S+++A   +W D  + R  +   GLKK PG SW+
Sbjct: 796 HHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWV 846



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 177/653 (27%), Positives = 320/653 (49%), Gaps = 21/653 (3%)

Query: 7   SVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIK 66
            +L     F ++   ++  +N+ + AY       + +  Y  +  +G+  D FTF  V+K
Sbjct: 48  PLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLK 107

Query: 67  ACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVV 126
           AC    D   G  I+  ++  G +   +I  SL+ M+ K      AR +FD+M  K D V
Sbjct: 108 ACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVK-DGV 166

Query: 127 LWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
            WN++IS  S S    EAL +F  MQ  G   +  + +    A            IH   
Sbjct: 167 CWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYV 226

Query: 187 VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAM 246
           V+  +++   V+N+LI MY +CG +  A  V  ++  +D VSW +M+ G+V+N  Y + +
Sbjct: 227 VR--RSICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGL 284

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
           Q   +++    K ++V  VNA+     + +L  GKE++ YA++ G +SD+ +   ++ MY
Sbjct: 285 QLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMY 344

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
           AKC  +     +F  +  +D ++W+  ++   +     + L +F+ +Q EGL  D  I+ 
Sbjct: 345 AKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILS 404

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
            ++  C+ +  +   K +H Y I+  + SD+ ++  +V +Y +     Y+  +F  ++ K
Sbjct: 405 ILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIK 464

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           D+V W ++I+ +   G  + ALE+F  +  + +  DS T+V   SA + +  L  G  L+
Sbjct: 465 DIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLH 524

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRG 544
           G I + GF  +  V  +L+DMYA+CG+L    ++F   +  KD + W  MI     +G  
Sbjct: 525 GGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYS 584

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYA 603
             AI  F +M+ E+  P+ +TF+ +L A S+  ++ E   F   I+R  +         +
Sbjct: 585 NEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGF--------LS 636

Query: 604 C------LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
           C      L+D+  +   L  + +    M+ + T   W A+L A  +H   EL 
Sbjct: 637 CTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTIS-WNAMLSAYAMHGQGELA 688


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/560 (40%), Positives = 342/560 (61%), Gaps = 5/560 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYA 338
           G++LHA  +  G   D  +   L+D+YA C  V+   R+F +M  Q +   W  +I  YA
Sbjct: 82  GRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYA 141

Query: 339 QNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
           ++     A+EL+R +   G ++ D      VL AC+ L  +   +E+H  ++R   + D+
Sbjct: 142 RDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADV 201

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            +   ++D+Y KCG +D +  VF+S   +D V W SMI++   NG   EAL L   M   
Sbjct: 202 FVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAE 261

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +    +TLVSA+SAA+    L +G+EL+G+  R+GF  +  + +SL+DMYA+ G + +A
Sbjct: 262 GIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVA 321

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSH 575
             +F+ +  ++LI W +MI   G+HG    A +LF +M  E+   PDHITF+ +L AC+H
Sbjct: 322 RVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNH 381

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
            G++ E K+  ++M   Y + P  +HY CLVD+LG +   +EA   ++ M ++P + +W 
Sbjct: 382 GGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWG 441

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL  C++H N EL E+   KL+EL+P + GNYVL+SN++A S KW++  +VR  M   G
Sbjct: 442 ALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNRG 501

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           LKK    SWIE+  K H F+  D SH  SDEIY++L E  E L  + GYV  T  V HNV
Sbjct: 502 LKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEEL-ERLEGLISQTGYVPDTTSVFHNV 560

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           E++EK  M+ GHSERLAIA+G++ +  G+ + +TKNLRVC DCH   KL+S++  RE+++
Sbjct: 561 EDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIEQREIII 620

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD NR+HHF  G CSC D+W
Sbjct: 621 RDVNRYHHFVNGECSCKDHW 640



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 224/439 (51%), Gaps = 11/439 (2%)

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           N   +   L++C  S     G ++HA  + SG  L   +A  L+ +YA CG ++ A  + 
Sbjct: 62  NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121

Query: 219 YQLENKDSVS-WNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGN 276
            ++ N+ +V  WN ++  + ++     A++ +RE+   G  +PD       + A   L +
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G+E+H   ++  + +D+ +   L+DMYAKC CV+    VF   T +D + W ++IA 
Sbjct: 182 LGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAA 241

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SD 395
             QN    +AL L R +  EG+   ++ + S + A +    + + +E+HGY  R+G  S 
Sbjct: 242 CGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQ 301

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM-N 454
             +  +++D+Y K G +  +R +F+ +  ++++SW +MI  +  +G A+ A ELF  M N
Sbjct: 302 DKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRN 361

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGA 512
           EA V  D IT V  LSA +   ++++ KE+   ++   ++++  V   + LVD+    G 
Sbjct: 362 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTV-YSIKPMVQHYTCLVDVLGHSGR 420

Query: 513 LDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALL 570
              A+ V   +  K D  +W +++N   +H   ++A    +K+ E E     +   L+ +
Sbjct: 421 FKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNI 480

Query: 571 YACSHSGLINEGKKFLEIM 589
           YA   SG   E  +  ++M
Sbjct: 481 YA--QSGKWEEAARVRKLM 497



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 216/465 (46%), Gaps = 33/465 (7%)

Query: 39  PLRVLETYSRMRVLG----------ISVDAFTFPC-----------VIKACAMLKDLDCG 77
           P+  L+T S +R             +   AF  PC           ++++C + + +  G
Sbjct: 23  PVSSLQTNSHLRPAPNAASPPPSPPVQNPAFLSPCPYPYNHNNYATILRSCVLSRAVRPG 82

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
            ++H  +L  G      +   LV +YA C     AR+LFD M  + +V LWN +I AY+ 
Sbjct: 83  RQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYAR 142

Query: 138 SGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            G    A+ L+REM   G +  + +T+   L+AC        G E+H   +++     V+
Sbjct: 143 DGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVF 202

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V   LI MYA+CG + EA  V      +D+V WNSM+    QN    +A+   R +   G
Sbjct: 203 VCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEG 262

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             P  V  V+A+SA+   G L  G+ELH Y  ++GF S  ++  +L+DMYAK   V    
Sbjct: 263 IAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVAR 322

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGL 375
            +F Q+  ++ ISW  +I G+  +     A ELFR ++ E  +  D +    VL AC+  
Sbjct: 323 VLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHG 382

Query: 376 KCMSQTKEIHG-----YIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVS 429
             + + KE+       Y I+  +     L   VDV G  G    + +V + +  K D   
Sbjct: 383 GMVQEAKEVFDLMVTVYSIKPMVQHYTCL---VDVLGHSGRFKEASDVIKGMLVKPDSGI 439

Query: 430 WTSMISS-YVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           W ++++   +H  +    L L  L+     ++ +  L+S + A S
Sbjct: 440 WGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQS 484



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 222/470 (47%), Gaps = 47/470 (10%)

Query: 1   MYGKCGSVLDAEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDA 58
           +Y  CG V  A +LFD++ +Q  VF WN ++ AY  +G     +E Y  M   G +  D 
Sbjct: 107 LYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDN 166

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           FT+P V+KACA L DL  G ++H  V++  + +  F+   L+ MYAKC    +A  +FD 
Sbjct: 167 FTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDS 226

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
              + D V+WNS+I+A   +G+  EAL L R M   G+     T V+A+ A  D+     
Sbjct: 227 TTVR-DAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPR 285

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G E+H    + G   Q  +  +L+ MYA+ G +T A  +  QL +++ +SWN+M+ GF  
Sbjct: 286 GRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGM 345

Query: 239 NDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELH-----AYAIKQGF 292
           +     A + FR ++   Q  PD +  V  +SA    G +   KE+       Y+IK   
Sbjct: 346 HGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIK--- 402

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAG-YAQNN 341
                    ++  Y   C V+ +G       A D I           W  ++ G     N
Sbjct: 403 --------PMVQHYT--CLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKN 452

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA 401
             L  L L + ++LE  DA   ++ S + A SG     +   +   +  +GL  ++  + 
Sbjct: 453 VELAELALHKLIELEPEDAGNYVLLSNIYAQSGK--WEEAARVRKLMTNRGLKKIIACSW 510

Query: 402 IVDVYGK-----CGNIDYSRN--VFESIES-KDVVSWTSMI---SSYVHN 440
           I ++ GK      G+  + R+  ++E +E  + ++S T  +   +S  HN
Sbjct: 511 I-ELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPDTTSVFHN 559



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 92/169 (54%), Gaps = 10/169 (5%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           ++ G++L+  ++  G  L+  +A+ LVD+YA CG + +A ++F+ +  + ++ LW  +I 
Sbjct: 79  VRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIR 138

Query: 537 ANGLHGRGKVAIDLFYKMEA-ESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQ 594
           A    G  + AI+L+ +M A  S  PD+ T+  +L AC+    +  G++  + +MR  + 
Sbjct: 139 AYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWA 198

Query: 595 LDPWPEHYAC--LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
            D     + C  L+D+  +   ++EA+    S  +   A VW +++ AC
Sbjct: 199 ADV----FVCAGLIDMYAKCGCVDEAWAVFDSTTVR-DAVVWNSMIAAC 242


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/681 (35%), Positives = 372/681 (54%), Gaps = 70/681 (10%)

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           K  +S    +  F + + +   ++ F  +   G  PD       +     L  L  GK++
Sbjct: 37  KTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQM 96

Query: 284 HAYAIKQGFVSDLQIGNTLMDMY-------------------------------AKCCCV 312
           H +A+  G   D  + ++L+ MY                               A+   V
Sbjct: 97  HCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRV 156

Query: 313 NYMGRVFYQM----TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
                +FYQ        + +SW  +I+G+ ++  +L A+ +F+ + LEGL  D   + SV
Sbjct: 157 KETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSV 216

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKC------------------ 409
           L A   L       +IH Y+I++GL  D  +++A++D+YGKC                  
Sbjct: 217 LPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDV 276

Query: 410 -------------GNIDYSRNVFESIESKD--VVSWTSMISSYVHNGLANEALELFYLMN 454
                        G +D +  VF+  +  D  VVSWTSMI+S   NG   EALELF  M 
Sbjct: 277 GACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQ 336

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              V+ +S+T+   L A  +++ L  GK  + F +R G   +  V S+L+DMYA+CG + 
Sbjct: 337 IEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRML 396

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            +   F+ +  ++L+ W S++    +HG+   AI++F  M+     PDH++F  +L AC+
Sbjct: 397 ASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACT 456

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
             GL  EG  + + M  ++ ++   EHY+C+V LLGR+  LEEAY  ++ M  EP + VW
Sbjct: 457 QGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVW 516

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALL +CRVH+  +LGEI AK++ EL+P NPGNY+L+SN++A+   W +V+ VR  MR  
Sbjct: 517 GALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSR 576

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           GLKK PG SWIEI NK+H  +A D SH +  +I +KLA++T ++++  GYV  T FVL +
Sbjct: 577 GLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKS-GYVPHTDFVLQD 635

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           VEE++K Q+L GHSE+LA+  G+L +  G  +++ KNLR+C DCH+  K +S    RE+ 
Sbjct: 636 VEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIF 695

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           VRD NRFH F+ GVCSCGDYW
Sbjct: 696 VRDTNRFHQFKGGVCSCGDYW 716



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 208/476 (43%), Gaps = 81/476 (17%)

Query: 41  RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV 100
            V+  +S M   GI  D+   P VIK CA L  L  G ++H   L  G      +++SL+
Sbjct: 57  HVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLL 116

Query: 101 AMYAKCYDFRKARQLFDRM----------------------------------GEKEDVV 126
            MY +    + AR +FD++                                  G + ++V
Sbjct: 117 HMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLV 176

Query: 127 LWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
            WN +IS ++ SG  L+A+ +F+ M   GL  +  +  + L A  D     +G++IH   
Sbjct: 177 SWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYV 236

Query: 187 VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD--------------------- 225
           +K G     +V +ALI MY +C   +E +GV  +++  D                     
Sbjct: 237 IKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNAL 296

Query: 226 ------------SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
                        VSW SM+    QN    +A++ FRE+Q  G KP+ V     + A G 
Sbjct: 297 EVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGN 356

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           +  LL+GK  H ++++ G  +D+ +G+ L+DMYAKC  +      F  M  ++ +SW ++
Sbjct: 357 IAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSL 416

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHG 386
           +AGYA +    +A+ +F  +Q  G   D +    VL AC+       G          HG
Sbjct: 417 MAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHG 476

Query: 387 YIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS-YVHN 440
              R     +   + +V + G+ G ++ +  + + +    D   W +++SS  VHN
Sbjct: 477 VEAR-----MEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHN 527



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 147/310 (47%), Gaps = 39/310 (12%)

Query: 2   YGKCGSVLDAEQLF----DKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
           + + G V + ++LF    D   +  + +WN M+  +  +G  L  +  +  M + G+  D
Sbjct: 150 FARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPD 209

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             +   V+ A   L     G +IH  V+K G     F+V++L+ MY KC    +   +F+
Sbjct: 210 GTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFN 269

Query: 118 RMGEKE--------------------------------DVVLWNSIISAYSASGQCLEAL 145
            M E +                                +VV W S+I++ S +G+ +EAL
Sbjct: 270 EMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEAL 329

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
            LFREMQ  G+  N+ T    L AC + +    G   H  ++++G    VYV +ALI MY
Sbjct: 330 ELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMY 389

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV--- 262
           A+CG+M  +      + N++ VSWNS++ G+  +    +A+  F  +Q  GQKPD V   
Sbjct: 390 AKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFT 449

Query: 263 CTVNAVSASG 272
           C ++A +  G
Sbjct: 450 CVLSACTQGG 459



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/248 (20%), Positives = 92/248 (37%), Gaps = 69/248 (27%)

Query: 22  TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIH 81
            V +W +M+ +   NG+ +  LE +  M++ G+  ++ T PC++ AC  +  L  G   H
Sbjct: 308 NVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAH 367

Query: 82  GLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM---------------------- 119
              L+ G  +  ++ ++L+ MYAKC     +R  FD M                      
Sbjct: 368 CFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTF 427

Query: 120 ------------GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
                       G+K D V +  ++SA +  G   E    F  M R              
Sbjct: 428 EAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSR-------------- 473

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDS 226
                                 G   ++   + ++ +  R G++ EA  ++ Q+    DS
Sbjct: 474 --------------------NHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDS 513

Query: 227 VSWNSMLT 234
             W ++L+
Sbjct: 514 CVWGALLS 521



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 65/141 (46%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +L +   FD +  R + +WN+++  Y  +G+    +  +  M+  G   D  +
Sbjct: 388 MYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVS 447

Query: 61  FPCVIKACAM--LKD-----LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           F CV+ AC    L +      D  ++ HG+  +  + S       +V +  +     +A 
Sbjct: 448 FTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSC------MVTLLGRSGRLEEAY 501

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
            +  +M  + D  +W +++S+
Sbjct: 502 AMIKQMPFEPDSCVWGALLSS 522


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/760 (32%), Positives = 407/760 (53%), Gaps = 73/760 (9%)

Query: 108 DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL 167
           +  ++ Q+F  + E  +  + N+++  Y       +A+ +++ M    +  + YT+    
Sbjct: 75  NINQSYQIFSHI-ENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILF 133

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
           Q+C     E  G  I    +K G +  VY+ N LI MYA CG +++A  V       D V
Sbjct: 134 QSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMV 193

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           SWNSML G+V                                    +GN+   K+++   
Sbjct: 194 SWNSMLAGYV-----------------------------------LVGNVEEAKDVYDRM 218

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
            ++  ++     N+++ ++ K   V    ++F +M  +D +SW+ +I+ Y QN  + +AL
Sbjct: 219 PERNVIA----SNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEAL 274

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS------------- 394
            LF+ +   G+  D +++ SVL ACS L  +   K +HG +++ G+              
Sbjct: 275 ILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMY 334

Query: 395 -------------------DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
                              D +  N+++  Y KCG I+ +R +F+S+  KD VSW++MIS
Sbjct: 335 SSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMIS 394

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y       E L LF  M     + D   LVS +SA + L+ L +GK ++ +I + G  +
Sbjct: 395 GYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKI 454

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
              + ++L++MY + G ++ A +VF  ++ K +  W ++I    ++G    ++  F +M+
Sbjct: 455 NIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMK 514

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
                P+ ITF+A+L AC H GL++EG +    M  ++++ P  +HY C+VDLLGRA  L
Sbjct: 515 EHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGML 574

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           +EA + + SM + P    W ALLGAC+ + + E GE + +KL+EL P + G  VL+SN++
Sbjct: 575 KEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIY 634

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           A+   W DV +VR  MR  G+ KTPG S IE   ++H F+A DK+H +++ I   L E+ 
Sbjct: 635 ASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMA 694

Query: 736 EKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVC 795
           +KL+ E GY   T+ V  +++EEEK   L+ HSE+LAIA+G++     + IRI KNLR+C
Sbjct: 695 KKLKLE-GYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRIC 753

Query: 796 VDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            DCH+  KL+S+ F RE+VVRD +RFHHF+ G CSC DYW
Sbjct: 754 NDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 226/521 (43%), Gaps = 99/521 (19%)

Query: 13  QLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM-L 71
           Q+F  +     F  N M+  Y+    P + +  Y  M    ++ D +T+P + ++C++ L
Sbjct: 81  QIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRL 140

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF--------------- 116
            + D G  I   VLK G+DS  +I N+L+ MYA C +   AR++F               
Sbjct: 141 AEFD-GKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSML 199

Query: 117 ----------------DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-- 158
                           DRM E+ +V+  NS+I  +   G   EA  LF EM++  LV+  
Sbjct: 200 AGYVLVGNVEEAKDVYDRMPER-NVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWS 258

Query: 159 -----------------------------NAYTFVAALQACEDSSFETLGMEIHAATVKS 189
                                        +    ++ L AC        G  +H   VK 
Sbjct: 259 ALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKV 318

Query: 190 GQNLQVYVANALIAMYA-------------------------------RCGKMTEAAGVL 218
           G    V + NALI MY+                               +CG++ +A  + 
Sbjct: 319 GIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALF 378

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
             + +KD+VSW++M++G+ Q D + + +  F+E+Q  G KPD+   V+ +SA   L  L 
Sbjct: 379 DSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALD 438

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
            GK +HAY  K G   ++ +G TL++MY K  CV     VF  +  +   +W  +I G A
Sbjct: 439 QGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLA 498

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDL 396
            N    K+L+ F  ++  G+  + +   +VL AC  +  + +       +I+  K   ++
Sbjct: 499 MNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNI 558

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
                +VD+ G+ G +  +  + ES+  + DV +W +++ +
Sbjct: 559 KHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGA 599



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 173/359 (48%), Gaps = 40/359 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++GK G+V +A +LF+++ Q+ + +W+A++  Y  N      L  +  M   GI VD   
Sbjct: 232 LFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVV 291

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCG--------------YDSTDFIV---------- 96
              V+ AC+ L  +  G  +HGLV+K G              Y S + +V          
Sbjct: 292 VLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESC 351

Query: 97  -------NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                  NS+++ Y KC +  KAR LFD M +K++V  W+++IS Y+   +  E L LF+
Sbjct: 352 CLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVS-WSAMISGYAQQDRFTETLVLFQ 410

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EMQ  G   +    V+ + AC   +    G  IHA   K+G  + + +   LI MY + G
Sbjct: 411 EMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLG 470

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + +A  V   LE K   +WN+++ G   N L  K+++ F E++  G  P+++  V  + 
Sbjct: 471 CVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLG 530

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           A   +G L++    H  ++ Q    + +IG  +   Y   C V+ +GR      A++ I
Sbjct: 531 ACRHMG-LVDEGHRHFNSMIQ----EHKIGPNI-KHYG--CMVDLLGRAGMLKEAEELI 581


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/658 (35%), Positives = 383/658 (58%), Gaps = 12/658 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           ++HA ++K+      +V++ L+A+Y+  +   +  A  +  +++ +  + WN+++  +V+
Sbjct: 31  QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 90

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N      +  F EL      PD       +    RLG +  GK++H  A+K GF SD+ +
Sbjct: 91  NQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFV 149

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV-QLEG 357
             +L++MY+KC  ++   +VF  M  +D + W ++I GYA+      AL+LF  + + + 
Sbjct: 150 QGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDA 209

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
               V++         GL    + +       +    +LV  NA+++ Y K G+ D +  
Sbjct: 210 FSWTVLV--------DGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALE 261

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  +   D+V+W  MI+ Y  NG   +A+++F++M +        TLVS LSA S L++
Sbjct: 262 LFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAV 321

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L KG+ ++ ++ + GF L+G + +SL++MYA+CG ++ A  VF  +Q K +  WT++I  
Sbjct: 322 LGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVG 381

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G+HG    A+ LF +M      P+ I F+ +L AC+H+GL+++G+++ ++M  +Y+++P
Sbjct: 382 LGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEP 441

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHY CLVD+L RA HLEEA   + +M I P   +W +LLG  R H   ++GE  A+++
Sbjct: 442 TLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRV 501

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           +E+ P   G Y+L+SN++AAS  W+ V  VR  M   G +K PG S +E    +H FI  
Sbjct: 502 IEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVG 561

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D SH ++ EIY K++E+ EKL+  G     TQ +L    E+EK   L  HSERLAIA+G+
Sbjct: 562 DISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGL 621

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +    G  IRI KNLRVC DCHS  KL+S+++ RE++VRD  RFHHF+ G CSC DYW
Sbjct: 622 INVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 216/447 (48%), Gaps = 39/447 (8%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +FD++ +R++  WN ++  YV N      +  +  + V     D FT PCVIK CA 
Sbjct: 66  ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFTLPCVIKGCAR 124

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L  +  G +IHGL LK G+ S  F+  SLV MY+KC +   AR++FD M +K DVVLWNS
Sbjct: 125 LGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDK-DVVLWNS 183

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTF---VAALQACEDSSFETLGMEIHAATV 187
           +I  Y+  G+   AL LF EM       +A+++   V  L  C                V
Sbjct: 184 LIDGYARCGEIDIALQLFEEMPE----RDAFSWTVLVDGLSKC--------------GKV 225

Query: 188 KSGQNL-------QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +S + L        +   NA+I  Y + G    A  + YQ+   D V+WN M+ G+  N 
Sbjct: 226 ESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNG 285

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  A++ F  +   G +P     V+ +SA   L  L  G+ +H+Y  K GF  D  +G 
Sbjct: 286 QFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGT 345

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L++MYAKC C+     VF  +  +    WT II G   +     AL LF  +   GL  
Sbjct: 346 SLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKP 405

Query: 361 DVMIIGSVLMACSGLKCMSQTKE-----IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYS 415
           + +I   VL AC+    +   ++     ++ Y I   L        +VD+  + G+++ +
Sbjct: 406 NAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEH---YGCLVDILCRAGHLEEA 462

Query: 416 RNVFESIE-SKDVVSWTSMISSYVHNG 441
           +N  E++  S + V W S++    ++G
Sbjct: 463 KNTIENMPISPNKVIWMSLLGGSRNHG 489



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 248/505 (49%), Gaps = 22/505 (4%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYA--KCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           ++H   LK    +  F+ + L+A+Y+  K  D   AR +FDR+ ++  ++ WN+II  Y 
Sbjct: 31  QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRI-QRRSLIHWNTIIKCYV 89

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +    + + LF E+    L  N +T    ++ C        G +IH   +K G    V+
Sbjct: 90  ENQFSHDGIVLFHELVHEYLPDN-FTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF 148

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V  +L+ MY++CG++  A  V   + +KD V WNS++ G+ +      A+Q F E+    
Sbjct: 149 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM---- 204

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            + D       V    + G + + ++L      +  VS     N +++ Y K    +   
Sbjct: 205 PERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVS----WNAMINGYMKSGDFDSAL 260

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            +FYQM   D ++W  +IAGY  N   + A+++F  +   G       + SVL A SGL 
Sbjct: 261 ELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLA 320

Query: 377 CMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            + + + IH Y+ + G   D ++  +++++Y KCG I+ +  VF +I+ K V  WT++I 
Sbjct: 321 VLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIV 380

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
               +G+AN AL LF  M +  ++ ++I  +  L+A +   ++  G++    ++ + + +
Sbjct: 381 GLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNE-YKI 439

Query: 496 EGSVA--SSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           E ++     LVD+  R G L+ A N + N   + + ++W S++  +  H  GK+ I  + 
Sbjct: 440 EPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNH--GKIDIGEYA 497

Query: 553 KMEAESFAPDHI---TFLALLYACS 574
                  AP+ I     L+ +YA S
Sbjct: 498 AQRVIEVAPETIGCYILLSNMYAAS 522



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 134/282 (47%), Gaps = 9/282 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++FD +  + V  WN+++  Y   GE    L+ +  M       DAF+
Sbjct: 156 MYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMP----ERDAFS 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++   +    ++   K+   +      S + ++N     Y K  DF  A +LF +M 
Sbjct: 212 WTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMING----YMKSGDFDSALELFYQM- 266

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D+V WN +I+ Y  +GQ ++A+ +F  M ++G   +  T V+ L A    +    G 
Sbjct: 267 PIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGR 326

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH+   K+G  L   +  +LI MYA+CG +  A  V   ++ K    W +++ G   + 
Sbjct: 327 WIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHG 386

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           +   A+  F E+   G KP+ +  +  ++A    G + +G++
Sbjct: 387 MANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQ 428



 Score = 39.7 bits (91), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 1/141 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A  +F  + ++ V  W A++     +G     L  +  M   G+  +A  
Sbjct: 350 MYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAII 409

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVL-KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC     +D G +   +++ +   + T      LV +  +     +A+   + M
Sbjct: 410 FIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENM 469

Query: 120 GEKEDVVLWNSIISAYSASGQ 140
               + V+W S++      G+
Sbjct: 470 PISPNKVIWMSLLGGSRNHGK 490


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/689 (35%), Positives = 393/689 (57%), Gaps = 3/689 (0%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +DA     +++A    K L  G  +H  V+  G  +  ++  +L+++Y  C  F  A+ +
Sbjct: 1   MDARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNV 60

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFRE-MQRVGLVTNAYTFVAALQACEDSS 174
           FD +    ++ L N +++ Y+ +    EALGLF + M    L  ++YT+ + L+AC    
Sbjct: 61  FDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
              LG  IH   VK G  + + V ++L+ MYA+C +   A  +  ++ +KD   WN++++
Sbjct: 121 RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVIS 180

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            + Q+  + +A+++F  ++  G +PD V    A+S+  RL +L  G+E+H   +  GF  
Sbjct: 181 CYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRM 240

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           D  +   L+DMY KC  +     VF QM  +  ++W ++I GY      +  ++LF+ + 
Sbjct: 241 DSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMY 300

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNID 413
            EG+   +  + S LMACS    + + K +HGYIIR  +   + LN+ ++D+Y KCG ++
Sbjct: 301 SEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVE 360

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +  +F+ +     VSW  MIS YV  G   +AL LF  M+++ VE D+IT  S L+A S
Sbjct: 361 SAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACS 420

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            L+ L+KG+E++  I+ +       V  +L+DMYA+CGA++ A  VF C+  +DL+ WTS
Sbjct: 421 QLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTS 480

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDY 593
           MI A G HGR   A++LF +M   +  PD +TFLA+L ACSH+GL+++G      M   Y
Sbjct: 481 MITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVY 540

Query: 594 QLDPWPEHYACLVDLLGRANHLEEAYQFVRS-MQIEPTAEVWCALLGACRVHSNKELGEI 652
            + P  EHY+CL+ LLGRA  L EAY+ ++S  +I    ++   L  ACR+H N +LG  
Sbjct: 541 GIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVE 600

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
           +A+ L++ DP +   Y+++SN++A+  KW +V  VR +M+  GLKK PG SWIEI  KI 
Sbjct: 601 IAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIV 660

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLERE 741
            F   D SH   + I   L+ +T  +E E
Sbjct: 661 PFFVEDNSHYHLEGIGNILSYLTSHMEDE 689



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 245/516 (47%), Gaps = 37/516 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC     A +LFD++  + V  WN ++  Y  +G+    L  +  MR  G   D+ T
Sbjct: 150 MYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVT 209

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I +CA L DLD G +IH  ++  G+    F+  +LV MY KC     A ++F++M 
Sbjct: 210 ITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMP 269

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  VV WNS+I+ Y   G  +  + LF+ M   G+     T  + L AC  S+    G 
Sbjct: 270 NKT-VVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGK 328

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   +++     +++ ++L+ +Y +CGK+  A  +   +    +VSWN M++G+V   
Sbjct: 329 FVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEG 388

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++ F E+  +  +PD +   + ++A  +L  L  G+E+H   +++   ++  +  
Sbjct: 389 KLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMG 448

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  V     VF  +  +D +SWT++I  Y  +    +ALELF  +    +  
Sbjct: 449 ALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKP 508

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE 420
           D +   ++L ACS           H  ++  GL      N +++VYG    I++      
Sbjct: 509 DRVTFLAILSACS-----------HAGLVDDGLYH---FNQMINVYGIIPRIEH------ 548

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE-SDSITLVSALSAASSL-SIL 478
                    ++ +I+     G  +EA E+     ++N E SD   L+S L +A  L   L
Sbjct: 549 ---------YSCLITLLGRAGRLHEAYEIL----QSNPEISDDFQLLSTLFSACRLHKNL 595

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
             G E+   +I K  + + S    L +MYA  G  D
Sbjct: 596 DLGVEIAENLIDKDPD-DSSTYIILSNMYASFGKWD 630


>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
 gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
          Length = 533

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/536 (42%), Positives = 339/536 (63%), Gaps = 8/536 (1%)

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GLDADVM 363
           MYAKC       ++F +M+ +D + WT +I  Y Q     +AL LF+ +Q E GL AD +
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            + SV  A   L  +     +HGY  RK L  +L + N+I+ ++ KCGN + +R VF+ +
Sbjct: 61  AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
             +DV+SW SM+S Y  NG A EAL LF  M +++ +   +T +  +SA + L     G+
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT--KDLILWTSMINANGL 540
           + + FI+     ++ +++++L+DMYA+CG L+ A  +FN +    ++   W  +I+  G+
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK-FLEIMRCDYQLDPWP 599
           HG GK A++LF +M+ E   P+H TF ++L ACSH+GLI+EG+K F E+ R    L+   
Sbjct: 241 HGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLED-- 298

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           +H+AC+VD+LGRA  L+EA+  ++ M   P+  VW ALL AC++H N ELG+  A  LL+
Sbjct: 299 KHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQ 358

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+P + G YVL+SN++AAS KWK+V ++R  M+  GLKK    S IE G  I  F   D+
Sbjct: 359 LEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQ 418

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            +    E+YKK+  +  ++ +  GYV      LH+VEEE+K +ML  HSE+LA+A+GVLK
Sbjct: 419 ENPYRHEVYKKMESLAIEM-KMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLK 477

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
              G +IR+TKNLRVC DCHS  K +S ++ R+++VRDANRFHHF+ G CSC DYW
Sbjct: 478 IDPGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 169/333 (50%), Gaps = 17/333 (5%)

Query: 102 MYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNA 160
           MYAKC  F   R++FD M  K D+V W ++I+AY  + +  EAL LF++MQ+  GL+ ++
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTK-DLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADS 59

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
              V+   A            +H    +     ++ V N+++AM+ +CG   +A  V   
Sbjct: 60  IAVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDM 119

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +  +D +SWNSML+G+ QN    +A+  F E++ +  +P  V  +  VSA   LG    G
Sbjct: 120 MMERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLG 179

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM--TAQDFISWTTIIAGYA 338
           ++ H + +      D  + N LMDMYAKC  +     +F  +  T ++  SW  +I+GY 
Sbjct: 180 RKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYG 239

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRK 391
            +    +ALELF  +Q EG++ +     S+L ACS       G KC ++ K +   +  K
Sbjct: 240 MHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDK 299

Query: 392 GLSDLVILNAIVDVYGKCGNIDYSRNVFESIES 424
             +       +VD+ G+ G +  + ++ + + S
Sbjct: 300 HHA------CVVDMLGRAGLLQEAFDLIKEMPS 326



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 162/331 (48%), Gaps = 13/331 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAF 59
           MY KCG  +D  ++FD++S + +  W AM+ AY    +P   L  + +M+   G+  D+ 
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
               V  A   L D+     +HG   +        + NS++AM+ KC +  KAR +FD M
Sbjct: 61  AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E+ DV+ WNS++S Y+ +GQ  EAL LF EM+         T +  + AC    F  LG
Sbjct: 121 MER-DVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLG 179

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNSMLTGFV 237
            + H   V S   +   ++NAL+ MYA+CG + +A  +   +    +++ SWN +++G+ 
Sbjct: 180 RKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYG 239

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            +    +A++ F  +Q  G +P+     + +SA    G +  G++         F    +
Sbjct: 240 MHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKC--------FAEMKR 291

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           +  TL D +   C V+ +GR      A D I
Sbjct: 292 LSVTLEDKH-HACVVDMLGRAGLLQEAFDLI 321



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 2/235 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+ KCG+   A  +FD + +R V +WN+ML  Y  NG+    L  +  MR         T
Sbjct: 103 MHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVT 162

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA L     G K H  ++    +    + N+L+ MYAKC D  KA  LF+ + 
Sbjct: 163 ALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIP 222

Query: 121 EKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             E +   WN +IS Y   G   EAL LF  MQ  G+  N +TF + L AC  +     G
Sbjct: 223 PTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEG 282

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
            +  A   +    L+      ++ M  R G + EA  ++ ++ +  S   W ++L
Sbjct: 283 RKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALL 337


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/695 (35%), Positives = 375/695 (53%), Gaps = 44/695 (6%)

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANA---LIAMYARC 208
            R  L T+  + +  L AC   +        HA  +          A+A   LI  YA C
Sbjct: 4   SRSHLPTSGESLLRLLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAAC 63

Query: 209 GKMTEAAGVLYQ-----LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK--PDQ 261
             +  A  VL            +V +N ++     + L+  A+  F  ++  G    PD 
Sbjct: 64  SALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDH 123

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
                A+ +     +LL G ++H+   K     ++ + ++ + MY++C       RVF  
Sbjct: 124 YTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDG 183

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRT-VQLEGLDADVMIIGSVLMACSGLKCMSQ 380
           M  +D +SW  +IAG+A+     +A+E+F+  V L+G   D   +  +L A         
Sbjct: 184 MPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGN------ 237

Query: 381 TKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
                                      K  +I + R VF++++ K+++SW +M++ Y +N
Sbjct: 238 --------------------------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANN 271

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
               +A+ELF LM +  VE DSITL + L     LS    GK ++  I RK       + 
Sbjct: 272 EFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLE 331

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           ++L+DMYA CG L  A ++F+ +  +D+I WTS+I+A G HG G+ A+DLF KM  +   
Sbjct: 332 NALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLE 391

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
           PD I F+A+L ACSH+GL+ +GK + + M   Y + P  EHY C+VDLLGRA  + EAY 
Sbjct: 392 PDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYD 451

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
           F+ +M IEP   VW ALL ACR+HSN ++G + A  L  L P   G YVL+SN++A + +
Sbjct: 452 FITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGR 511

Query: 681 WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
           W DV  VR  M   G+KK PG+S +E+G+++H+F   D+ H +S+ IY KL E+  K+ R
Sbjct: 512 WADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKI-R 570

Query: 741 EGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHS 800
             GY  + +  LH+VEEE+K   L  HSE+LAIA+ +L ++ G++IR+T NLR C DCH 
Sbjct: 571 GMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHL 630

Query: 801 FCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             KL+S +  RE+V++D NR HH   GVCSCGDYW
Sbjct: 631 AAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 241/477 (50%), Gaps = 56/477 (11%)

Query: 99  LVAMYAKCYDFRKARQLFDRMGE----KEDVVLWNSIISAYSASGQCLEALGLFREMQRV 154
           L+  YA C     A  + +        +   V +N +I A +AS    +AL LF  M+  
Sbjct: 56  LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115

Query: 155 GLV--TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
           G     + YT+  AL++C  S    LG++IH+A  K   +  VYVA++ I+MY+RCG+  
Sbjct: 116 GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPE 175

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE---LQGAGQKPDQVCTVNAVS 269
           +A  V   + ++D VSWN+M+ GF +  L+ +A++ F++   LQG+   PD         
Sbjct: 176 DAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGS--MPD--------- 224

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
            +G +  +L                   +GN      AK   + ++ RVF  M  ++ IS
Sbjct: 225 -AGTMAGILPA-----------------MGN------AKPDDIRFVRRVFDNMQFKELIS 260

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W  ++A YA N  H+KA+ELF  ++ + ++ D + + +VL  C  L   S  K IH  I 
Sbjct: 261 WNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIK 320

Query: 390 RKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           RK +  +L++ NA++D+Y  CG +  +R +F+ + ++DV+SWTS+IS+Y  +G   EA++
Sbjct: 321 RKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVD 380

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMY 507
           LF  M    +E DSI  V+ L+A S   +L  GK   +    R     +    + +VD+ 
Sbjct: 381 LFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLL 440

Query: 508 ARCGALDIANKVFNCVQT----KDLILWTSMINANGLHGR---GKVAIDLFYKMEAE 557
            R G +   N+ ++ + T     +  +W +++ A  +H     G VA D  + +  E
Sbjct: 441 GRAGCI---NEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPE 494



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 206/451 (45%), Gaps = 55/451 (12%)

Query: 2   YGKCGSVLDAEQLF-----DKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS- 55
           Y  C ++  A  +      D  S+ T   +N ++ A  ++      L  ++ MR  G + 
Sbjct: 60  YAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPAC 119

Query: 56  -VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
             D +T+P  +K+C+  KDL  G +IH  V K   D   ++ +S ++MY++C     A +
Sbjct: 120 FPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYR 179

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDS 173
           +FD M  + DVV WN++I+ ++  G    A+ +F++   + G + +A T    L A  + 
Sbjct: 180 VFDGMPHR-DVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGN- 237

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                                           A+   +     V   ++ K+ +SWN+ML
Sbjct: 238 --------------------------------AKPDDIRFVRRVFDNMQFKELISWNAML 265

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
             +  N+ + KA++ F  ++    +PD +     +   G L     GK +H    ++   
Sbjct: 266 AVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMC 325

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            +L + N LMDMYA C C+     +F  M+A+D ISWT+II+ Y ++    +A++LF  +
Sbjct: 326 PNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKM 385

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG------YIIRKGLSDLVILNAIVDVYG 407
             +GL+ D +   +VL ACS    ++  K          +II K          +VD+ G
Sbjct: 386 LGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEH----YTCMVDLLG 441

Query: 408 KCGNIDYSRNVFES--IESKDVVSWTSMISS 436
           + G I+ + +   +  IE  + V W +++ +
Sbjct: 442 RAGCINEAYDFITTMLIEPNERV-WGALLQA 471



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 45/335 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           MY +CG   DA ++FD +  R V +WNAM+  +   G   R +E + +  VL G   DA 
Sbjct: 167 MYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAG 226

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++ A                                    AK  D R  R++FD M
Sbjct: 227 TMAGILPAMG---------------------------------NAKPDDIRFVRRVFDNM 253

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             KE ++ WN++++ Y+ +   ++A+ LF  M++  +  ++ T    L  C + S  ++G
Sbjct: 254 QFKE-LISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVG 312

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH    +      + + NAL+ MYA CG + +A  +   +  +D +SW S+++ + ++
Sbjct: 313 KRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKH 372

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQI 298
               +A+  F ++ G G +PD +  V  ++A    G L +GK    +   +   +   + 
Sbjct: 373 GHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEH 432

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
              ++D+  +  C+N          A DFI+   I
Sbjct: 433 YTCMVDLLGRAGCIN---------EAYDFITTMLI 458


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 219/636 (34%), Positives = 380/636 (59%), Gaps = 7/636 (1%)

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           I +  +  ++ EA  +L+Q++   +  +++++   +++ L  +  +  + ++ +G  P  
Sbjct: 46  IHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGL 105

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
                 +    +  +L++ ++L     ++    DL   N L+  YAK   +     +F +
Sbjct: 106 FILNRLLEMYAKCDSLMDSQKLFDEMPER----DLCSWNILISGYAKMGLLQEAKSLFDK 161

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL-EGLDADVMIIGSVLMACSGLKCMSQ 380
           M  +D  SWT +I+GY +++   +ALELFR ++  +   ++   + S L A + + C+  
Sbjct: 162 MPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRI 221

Query: 381 TKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
            KEIHGYI+R GL SD V+ +A+ D+YGKCG+I+ +R++F+ +  +D+V+WT+MI  Y  
Sbjct: 222 GKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQ 281

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           +G   E  +LF  +  + +  +  T    L+A ++ +  + GK+++G++ R GF+     
Sbjct: 282 DGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFA 341

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
           AS+LV MY++CG +  A +VF      DL  WTS+I     +G+   AI  F  +     
Sbjct: 342 ASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGT 401

Query: 560 APDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAY 619
            PDHITF+ +L AC+H+GL+++G  +   ++  Y L    +HYAC++DLL R+   +EA 
Sbjct: 402 QPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAE 461

Query: 620 QFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASR 679
             +  M ++P   +W +LLG CR+H N +L +  A+ L E++P NP  YV ++N++A + 
Sbjct: 462 NIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAG 521

Query: 680 KWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLE 739
            W +V ++R  M   G+ K PG SWI I   +H F+  D SH +S EI + L +++++++
Sbjct: 522 MWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMK 581

Query: 740 REGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCH 799
            E G+V  T FVLH+VE+E+K Q L  HSE+LA+A+G++ + EG+ I++ KNLR CVDCH
Sbjct: 582 EE-GFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCH 640

Query: 800 SFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +  K +S++  R+++VRD+NRFH FE G CSC DYW
Sbjct: 641 TAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 227/485 (46%), Gaps = 46/485 (9%)

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           EAL +  ++ +     +A  +   +Q+C  S     G ++H     SG    +++ N L+
Sbjct: 57  EALQILHQIDK----PSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLL 112

Query: 203 AMYARC-------------------------------GKMTEAAGVLYQLENKDSVSWNS 231
            MYA+C                               G + EA  +  ++  +D+ SW +
Sbjct: 113 EMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTA 172

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQ 290
           M++G+V++D   +A++ FR ++ +        TV++  A+      L  GKE+H Y ++ 
Sbjct: 173 MISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRT 232

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G  SD  + + L DMY KC  +     +F +M  +D ++WT +I  Y Q+    +  +LF
Sbjct: 233 GLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLF 292

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI-LNAIVDVYGKC 409
             +   G+  +      VL AC+        K++HGY+ R G        +A+V +Y KC
Sbjct: 293 ADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKC 352

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           GN+  +  VF+     D+ SWTS+I+ Y  NG  +EA+  F L+ ++  + D IT V  L
Sbjct: 353 GNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVL 412

Query: 470 SAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-D 527
           SA +   ++ KG +    I  + G        + ++D+ AR G  D A  + + +  K D
Sbjct: 413 SACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPD 472

Query: 528 LILWTSMINANGLHGRGKV---AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
             LW S++    +HG  K+   A +  +++E E+  P     LA +YA   +G+ +E  K
Sbjct: 473 KFLWASLLGGCRIHGNLKLAQRAAEALFEIEPEN--PATYVTLANIYAT--AGMWSEVAK 528

Query: 585 FLEIM 589
             + M
Sbjct: 529 IRKTM 533



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 172/338 (50%), Gaps = 4/338 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFT 60
           Y K G + +A+ LFDK+ +R  F+W AM+  YV +  P   LE +  M R      + FT
Sbjct: 146 YAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFT 205

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + A A +  L  G +IHG +++ G DS + + ++L  MY KC    +AR +FD+M 
Sbjct: 206 VSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMV 265

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ D+V W ++I  Y   G+  E   LF ++ R G+  N +TF   L AC + + E LG 
Sbjct: 266 DR-DIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGK 324

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H    + G +   + A+AL+ MY++CG M  A  V  +    D  SW S++ G+ QN 
Sbjct: 325 KVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNG 384

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIG 299
              +A+++F  L  +G +PD +  V  +SA    G +  G +  H+   + G        
Sbjct: 385 QPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHY 444

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG 336
             ++D+ A+    +    +  +M+ + D   W +++ G
Sbjct: 445 ACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGG 482



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 217/478 (45%), Gaps = 43/478 (8%)

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           A  +  +I++C   + L  G K+H  +   G+    FI+N L+ MYAKC     +++LFD
Sbjct: 70  ASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFD 129

Query: 118 RMGEKEDVVLWNSIISAYSASG-------------------------------QCLEALG 146
            M E+ D+  WN +IS Y+  G                               +  EAL 
Sbjct: 130 EMPER-DLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALE 188

Query: 147 LFREMQRV-GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
           LFR M+R     +N +T  +AL A        +G EIH   +++G +    V +AL  MY
Sbjct: 189 LFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMY 248

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
            +CG + EA  +  ++ ++D V+W +M+  + Q+    +    F +L  +G +P++    
Sbjct: 249 GKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFS 308

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
             ++A     +   GK++H Y  + GF       + L+ MY+KC  +    RVF +    
Sbjct: 309 GVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQP 368

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE-I 384
           D  SWT++IAGYAQN    +A+  F  +   G   D +    VL AC+    + +  +  
Sbjct: 369 DLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYF 428

Query: 385 HGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS-YVHNG 441
           H    + GL+      A I+D+  + G  D + N+   +  K D   W S++    +H  
Sbjct: 429 HSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGN 488

Query: 442 --LANEALELFYLMNEANVESDSITLVSALSAA---SSLSILKKGKELNGFIIRKGFN 494
             LA  A E  + +   N  +  +TL +  + A   S ++ ++K  +  G + + G +
Sbjct: 489 LKLAQRAAEALFEIEPEN-PATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLS 545



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 122/237 (51%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ +A  +FDK+  R + TW AM+  Y  +G      + ++ +   GI  + FT
Sbjct: 247 MYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFT 306

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ ACA     + G K+HG + + G+D   F  ++LV MY+KC +   A ++F +  
Sbjct: 307 FSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVF-KET 365

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+  W S+I+ Y+ +GQ  EA+  F  + + G   +  TFV  L AC  +     G+
Sbjct: 366 PQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGL 425

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLTG 235
           +  H+   + G          +I + AR G+  EA  ++ ++  K D   W S+L G
Sbjct: 426 DYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGG 482


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/583 (40%), Positives = 354/583 (60%), Gaps = 7/583 (1%)

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +PD+      +     LG L  GK +H + +   F +DL I N+++ MYAKC  +    +
Sbjct: 88  EPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQ 147

Query: 318 VFYQMTAQDFISWTTIIAGYAQN---NCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
           VF +M  +D ++WT++I GY+Q+   +    AL LF  +  +GL  +   + S++  C  
Sbjct: 148 VFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGF 207

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L      K+IHG   + G  + V + +++VD+Y +CG +  SR VF+ +ESK+ VSW ++
Sbjct: 208 LGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNAL 267

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           IS +   G   EAL LF  M      +   T  + L ++S+   L++GK L+  +++ G 
Sbjct: 268 ISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGK 327

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
            L G V ++L+ MYA+ G +  A KVF+ +   D++   SM+     HG GK A++LF +
Sbjct: 328 KLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEE 387

Query: 554 MEA-ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           M       P+ ITFL++L ACSH+GL++EG  + E+M+  Y L+P   HY  +VDL GRA
Sbjct: 388 MMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMK-KYGLEPKLSHYTTVVDLFGRA 446

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
             L++A  F+  M IEP A +W ALLGA ++H N E+G   A+K+LELDP  PG + L+S
Sbjct: 447 GLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLS 506

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           N++A++ +WKDV +VR  M+ SGLKK P  SW+EI N +H F A D SH + +++Y+   
Sbjct: 507 NIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWE 566

Query: 733 EITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNL 792
            + +K+ +E GYV  T  V   V+++EK   L  HSE+LA+A+ +L +  GS+IRI KN+
Sbjct: 567 NLNQKI-KEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNI 625

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           RVC DCHS  K VS +  RE++VRD NRFHHF  G CSC DYW
Sbjct: 626 RVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 199/389 (51%), Gaps = 7/389 (1%)

Query: 54  ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           +  D   +  ++K C ML  L  G  +H  ++   + +   I NS++ MYAKC     AR
Sbjct: 87  LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASG---QCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
           Q+FD M  K DVV W S+I+ YS  G       AL LF EM R GL  N +   + ++ C
Sbjct: 147 QVFDEMCVK-DVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCC 205

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
                   G +IH    K G    V+V ++L+ MYARCG++ E+  V  +LE+K+ VSWN
Sbjct: 206 GFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWN 265

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           ++++GF +     +A+  F ++Q  G    +      + +S   G+L  GK LHA+ +K 
Sbjct: 266 ALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKS 325

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G      +GNTL+ MYAK   +    +VF ++   D +S  +++ GYAQ+    +A+ELF
Sbjct: 326 GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELF 385

Query: 351 RTVQL-EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
             + L   ++ + +   SVL ACS    + +       + + GL   L     +VD++G+
Sbjct: 386 EEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGR 445

Query: 409 CGNIDYSRNVFESIE-SKDVVSWTSMISS 436
            G +D +++  E +    +   W +++ +
Sbjct: 446 AGLLDQAKSFIEEMPIEPNATIWGALLGA 474



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 189/382 (49%), Gaps = 11/382 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGISVD 57
           MY KCGS+  A Q+FD++  + V TW +M+  Y  +G        L  +  M   G+  +
Sbjct: 135 MYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPN 194

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            F    ++K C  L     G +IHG   K G+    F+ +SLV MYA+C + R++R +FD
Sbjct: 195 EFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFD 254

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            +  K +V  WN++IS ++  G+  EALGLF +MQR G     +T+ A L  C  S+  +
Sbjct: 255 ELESKNEVS-WNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALL--CSSSTTGS 311

Query: 178 L--GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           L  G  +HA  +KSG+ L  YV N L+ MYA+ G + +A  V  +L   D VS NSML G
Sbjct: 312 LEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIG 371

Query: 236 FVQNDLYCKAMQFFRELQ-GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
           + Q+ L  +A++ F E+      +P+ +  ++ ++A    G L  G        K G   
Sbjct: 372 YAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEP 431

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTII-AGYAQNNCHLKALELFRT 352
            L    T++D++ +   ++       +M  +   + W  ++ A     N  + A    + 
Sbjct: 432 KLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKV 491

Query: 353 VQLEGLDADVMIIGSVLMACSG 374
           ++L+        + S + A +G
Sbjct: 492 LELDPFYPGAHTLLSNIYASAG 513



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           N  +   L +  L+N  ++E D       L   + L  LK+GK ++  ++   F  +  +
Sbjct: 69  NPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVI 128

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---NGLHGRGKVAIDLFYKMEA 556
            +S++ MYA+CG+L+IA +VF+ +  KD++ WTSMI     +G       A+ LF +M  
Sbjct: 129 KNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVR 188

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY--ACLVDLLGRANH 614
           +   P+     +L+  C   G   +GK   +I  C ++       +  + LVD+  R   
Sbjct: 189 DGLRPNEFALSSLVKCCGFLGSCVDGK---QIHGCCWKYGFQENVFVGSSLVDMYARCGE 245

Query: 615 LEEAYQFVRSMQIEPTAEV-WCALL 638
           L E+       ++E   EV W AL+
Sbjct: 246 LRESRLVFD--ELESKNEVSWNALI 268


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/674 (34%), Positives = 384/674 (56%), Gaps = 7/674 (1%)

Query: 167 LQACEDSSFETLGMEIHAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD 225
           L++   +    LG  IHA  +++    L  +++N L+ MY++   +  A  VL     + 
Sbjct: 13  LESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRT 72

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
            V+W S+++G V N  +  A+  F  ++    +P+         AS  +   + GK++H 
Sbjct: 73  VVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHG 132

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
            A+K G + D+ +G +  DMY K         +F +M  ++  +W   I+   Q+   L 
Sbjct: 133 LALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLD 192

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVD 404
           A+  F+       + + +   + L AC  +  ++  +++H +I+R G   D+ + N ++D
Sbjct: 193 AIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLID 252

Query: 405 VYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
            YGKCG+I  +  VF  I   K+VVSW SM+++ V N     A  +F L     VE    
Sbjct: 253 FYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVF-LQARKEVEPTDF 311

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
            + S LSA + L  L+ G+ ++   ++        V S+LVDMY +CG+++ A +VF+ +
Sbjct: 312 MISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSEL 371

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKME--AESFAPDHITFLALLYACSHSGLINE 581
             ++L+ W +MI      G   +A+ LF +M   +    P ++T +++L  CS  G +  
Sbjct: 372 PERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVER 431

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G +  E MR +Y ++P  EH+AC+VDLLGR+  ++ AY+F+++M I+PT  VW ALLGAC
Sbjct: 432 GIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGAC 491

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           R+H   ELG+I A+KL ELD  + GN+V++SN+ A++ +W++   VR  M+  G+KK  G
Sbjct: 492 RMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVG 551

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            SWI + N+IH F A+D SH  + EI   L ++   + +E GYV  T   L ++E+EEK 
Sbjct: 552 YSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGM-KEAGYVPDTNLSLFDLEDEEKA 610

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             ++ HSE++A+A+G++   +G  IRITKNLR+C DCHS  K +SR+ GRE++VRD +RF
Sbjct: 611 SEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRF 670

Query: 822 HHFEAGVCSCGDYW 835
           H F+ G CSC DYW
Sbjct: 671 HRFKDGCCSCKDYW 684



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 214/446 (47%), Gaps = 16/446 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   +  A+ +      RTV TW +++   V N   L  L  ++ MR   +  + FT
Sbjct: 51  MYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFT 110

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV KA A ++    G +IHGL LK G     F+  S   MY K      A  +FD M 
Sbjct: 111 FPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMP 170

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ ++  WN+ IS      + L+A+  F+E   V    N+ TF A L AC D     LG 
Sbjct: 171 QR-NLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGR 229

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLTGFVQN 239
           ++HA  V+ G    V VAN LI  Y +CG +  A  V  ++ N K+ VSW SML   VQN
Sbjct: 230 QLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQN 289

Query: 240 DLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
               +A   F  LQ   + +P      + +SA   LG L  G+ +HA A+K     ++ +
Sbjct: 290 HEEERACMVF--LQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFV 347

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL--E 356
           G+ L+DMY KC  +    +VF ++  ++ ++W  +I GYA       AL LF  + L   
Sbjct: 348 GSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSH 407

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIH-----GYIIRKGLSDLVILNAIVDVYGKCGN 411
           G+    + + S+L  CS +  + +  +I       Y I  G         +VD+ G+ G 
Sbjct: 408 GIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFA---CVVDLLGRSGL 464

Query: 412 IDYSRNVFESIESKDVVS-WTSMISS 436
           +D +    +++  +  +S W +++ +
Sbjct: 465 VDRAYEFIQNMAIQPTISVWGALLGA 490



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 238/489 (48%), Gaps = 12/489 (2%)

Query: 77  GAKIHGLVLKCGYDS-TDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
           G  IH  +++        F+ N LV MY+K  D   + Q    +     VV W S+IS  
Sbjct: 25  GRTIHAHIIRTHVTPLPSFLSNHLVNMYSK-LDLLNSAQHVLSLTHLRTVVTWTSLISGC 83

Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
             + + L AL  F  M+R  +  N +TF    +A         G +IH   +K G    V
Sbjct: 84  VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDV 143

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           +V  +   MY + G   +A  +  ++  ++  +WN+ ++  VQ+     A+  F+E    
Sbjct: 144 FVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCV 203

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
             +P+ +     ++A   +  L  G++LHA+ ++ G+  D+ + N L+D Y KC  +   
Sbjct: 204 HGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSA 263

Query: 316 GRVFYQM-TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             VF ++   ++ +SW +++A   QN+   +A  +F   + E    D M I SVL AC+ 
Sbjct: 264 EMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTDFM-ISSVLSACAE 322

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L  +   + +H   ++  + D + + +A+VD+YGKCG+I+ +  VF  +  +++V+W +M
Sbjct: 323 LGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAM 382

Query: 434 ISSYVHNGLANEALELFYLMN--EANVESDSITLVSALSAASSLSILKKGKEL-NGFIIR 490
           I  Y H G  + AL LF  M      +    +TL+S LS  S +  +++G ++     + 
Sbjct: 383 IGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLN 442

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---GKV 546
            G        + +VD+  R G +D A +    +  +  I +W +++ A  +HG+   GK+
Sbjct: 443 YGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKI 502

Query: 547 AIDLFYKME 555
           A +  ++++
Sbjct: 503 AAEKLFELD 511



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 189/403 (46%), Gaps = 13/403 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G   DA  +FD++ QR + TWNA +   V +   L  +  +     +    ++ T
Sbjct: 152 MYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSIT 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   + AC  +  L+ G ++H  +++CGY     + N L+  Y KC D   A  +F+R+G
Sbjct: 212 FCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIG 271

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +++VV W S+++A   + +   A  +F + ++    T+ +   + L AC +     LG 
Sbjct: 272 NRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTD-FMISSVLSACAELGGLELGR 330

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  VK+     ++V +AL+ MY +CG +  A  V  +L  ++ V+WN+M+ G+    
Sbjct: 331 SVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQG 390

Query: 241 LYCKAMQFFRE--LQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-HAYAIKQGFVSDLQ 297
               A++ F E  L   G +P  V  ++ +S   R+G +  G ++  +  +  G     +
Sbjct: 391 DIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAE 450

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTII-AGYAQNNCHLKALELFRTVQL 355
               ++D+  +   V+        M  Q  IS W  ++ A        L  +   +  +L
Sbjct: 451 HFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFEL 510

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
           + +D+   ++ S ++A +G       +     ++RK + D+ I
Sbjct: 511 DHVDSGNHVVLSNMLASAG-------RWEEATVVRKEMKDIGI 546



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 150/329 (45%), Gaps = 10/329 (3%)

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL--VILNAIVDVYGKCGNIDYSRNVFES 421
           ++GS+L +     C    + IH +IIR  ++ L   + N +V++Y K   ++ +++V   
Sbjct: 8   LLGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSL 67

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
              + VV+WTS+IS  VHN     AL  F  M   NV+ +  T      A++ + I   G
Sbjct: 68  THLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTG 127

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           K+++G  ++ G   +  V  S  DMY + G    A  +F+ +  ++L  W + I+     
Sbjct: 128 KQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQD 187

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPE 600
            R   AI  F +       P+ ITF A L AC     +N G++    I+RC Y+ D    
Sbjct: 188 RRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVA 247

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA-CRVHSNKELGEIVAKKLLE 659
           +   L+D  G+   +  A      +        WC++L A  + H  +    +  +   E
Sbjct: 248 NG--LIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE 305

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVR 688
           ++P +     +IS+V +A  +   +E  R
Sbjct: 306 VEPTD----FMISSVLSACAELGGLELGR 330


>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 749

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/684 (34%), Positives = 385/684 (56%), Gaps = 13/684 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGY--DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           +I+  A  + L     IHG V+K      S   ++N LV  Y+KC DF  ARQ+FD + +
Sbjct: 67  LIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQ 126

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K  V  W  ++   + +G   + +  F E+    +V + Y   AA+QAC       +G  
Sbjct: 127 K-SVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEM 185

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  +  G + + +V  +L+ MYA+ G++ ++  V   LEN++ VSWN+M++GFV N L
Sbjct: 186 VHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGL 245

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           Y +A   F  + G   +P+  C ++   A G+LG++  G+ ++  A + G  S++ +G  
Sbjct: 246 YAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTA 305

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDF------ISWTTIIAGYAQNNCHLKALELFRTVQL 355
           L+DM+AKC CV     VF      +F      + W  +I+G+  +    +A+ LF  +  
Sbjct: 306 LIDMFAKCGCVTESWSVF----VSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQ 361

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYS 415
             +  DV    S L + + ++ +   K++HG I + G   + + NA++D Y KCG +D  
Sbjct: 362 NNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSIGVSLCNALMDAYAKCGELDAM 421

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           R +F++ E  + +SWT+++++Y  +    +AL +F  M E   + + +T    L++ +SL
Sbjct: 422 RKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASL 481

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             L+ G++++    + GF  +  V S L+DMYA+CG++  A KVF  ++  D+I WT+MI
Sbjct: 482 CSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMI 541

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           +    HG  K A++LF KME     P+  TFL LL+ACSH GL++EG ++  +M   Y L
Sbjct: 542 SGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGL 601

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
            P  EHYAC+VD+LGR   L EA++F+  M IEP  +VW  LLGACRVH N +L +I A+
Sbjct: 602 VPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQ 661

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
           K+L  +P +    VL+SN +  +   +    VR  M+   ++K  G SWI IG KIH F 
Sbjct: 662 KVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMMKSQAMRKETGMSWICIGGKIHKFC 721

Query: 716 ARDKSHSESDEIYKKLAEITEKLE 739
           + D+ H + D+IYK L  + EK++
Sbjct: 722 SGDQYHPQKDDIYKTLNVLMEKVQ 745



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 160/577 (27%), Positives = 282/577 (48%), Gaps = 15/577 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KC     A Q+FD++ Q++VF+W  ++     NG     ++ +  +    I  D +  
Sbjct: 108 YSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYAL 167

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              I+AC  +  +  G  +H  V+  G+ S  F+  SL+ MYAK      + ++F+ + E
Sbjct: 168 SAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSL-E 226

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             + V WN++IS + ++G   EA   F  M    +  N   F++  +A         G  
Sbjct: 227 NRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRY 286

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS--WNSMLTGFVQN 239
           I+    + G    ++V  ALI M+A+CG +TE+  V     +   V+  WN+M++GF  +
Sbjct: 287 INRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTIS 346

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +AM  F  +     K D     + +++   + +L   K+LH    K G +  + + 
Sbjct: 347 GHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSIG-VSLC 405

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N LMD YAKC  ++ M ++F      + ISWTT++  Y+Q++    AL +F  ++  G  
Sbjct: 406 NALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQ 465

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            + +    VL +C+ L  +   +++H    + G + D  + + ++D+Y KCG++  +  V
Sbjct: 466 PNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKV 525

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           FES++  DV+SWT+MIS Y  +G+A +ALELF  M       +S T +  L A S   ++
Sbjct: 526 FESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLV 585

Query: 479 KKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK-VFNCVQTKDLILWTSMIN 536
            +G +  +    R G   E    + +VD+  R G L  A K +       D  +W++++ 
Sbjct: 586 DEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLG 645

Query: 537 ANGLHGRGKVAIDLFYKMEAE---SFAPDHITFLALL 570
           A  +HG  ++A     K+ A+   S+ PD    L LL
Sbjct: 646 ACRVHGNIQLA-----KIAAQKVLSYNPDDFAALVLL 677



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 211/420 (50%), Gaps = 14/420 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + D+ ++F+ +  R   +WNAM+  +VSNG       ++ RM    I  +   
Sbjct: 208 MYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVAC 267

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V KA   L D++ G  I+ +  + G  S   +  +L+ M+AKC    ++  +F    
Sbjct: 268 FISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNF 327

Query: 121 EKEDVVL-WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               V L WN++IS ++ SG   EA+ LF  M +  +  + YT+ + L +  D       
Sbjct: 328 SGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYV 387

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H    KSG ++ V + NAL+  YA+CG++     +    E  + +SW +++T + Q+
Sbjct: 388 KQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQS 446

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             +  A+  F +++  G +P+QV     +++   L +L  G+++H+   K GF  D  + 
Sbjct: 447 SEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVE 506

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           + L+DMYAKC  V    +VF  +   D ISWT +I+GYAQ+     ALELFR ++L   +
Sbjct: 507 SVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPN 566

Query: 360 ADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
            +      +L ACS       GL+     +E +G +      ++     +VD+ G+ G +
Sbjct: 567 PNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLV-----PEIEHYACVVDILGRVGRL 621



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL-EGSVA---SSLVDMYA 508
           +N+ N      +L+  +  ++    LKK K ++GF+I+  F L E S+    + LV  Y+
Sbjct: 52  VNDGNCCYSETSLIELIRESADERCLKKAKSIHGFVIK--FQLIEKSLTVMLNQLVIAYS 109

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           +C     A +VF+ +  K +  WT ++     +G  +  ID F ++      PD     A
Sbjct: 110 KCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSA 169

Query: 569 LLYAC 573
            + AC
Sbjct: 170 AIQAC 174


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/691 (34%), Positives = 384/691 (55%), Gaps = 38/691 (5%)

Query: 182 IHAATVKSGQNLQVYVANALI---AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           IHA  +K+G +   Y  + LI    +      +  A  V   ++  + + WN+M  G   
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A+  +  +   G  P+       + +  +      G+++H + +K G+  DL +
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 299 GNTLMDMYAKCC----------------CVNYMG---------------RVFYQMTAQDF 327
             +L+ MY +                   V+Y                 ++F ++  +D 
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW  +I+GYA+   + +ALELF+ +    +  D   + SV+ AC+    +   +++H +
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           I   G  S+L I+NA++D+Y KCG ++ +  +FE +  KDV+SW ++I  Y H  L  EA
Sbjct: 246 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR--KGFNLEGSVASSLV 504
           L LF  M  +    + +T++S L A + L  ++ G+ ++ +I +  KG     S  +SL+
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLI 365

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMYA+CG ++ A +VF+ +  + L  W +MI    +HGR   A D+F +M      PD I
Sbjct: 366 DMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDI 425

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF+ LL ACSHSG+++ G+     M+ DY++ P  EHY C++DLLG +   +EA + + +
Sbjct: 426 TFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINT 485

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M++EP   +WC+LL AC++H N ELGE  A+ L++++P NPG+YVL+SN++A + +W +V
Sbjct: 486 MEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEV 545

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            ++R  +   G+KK PG S IEI + +H FI  DK H  + EIY  L E  E L  E G+
Sbjct: 546 AKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE-MEVLLEEAGF 604

Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
           V  T  VL  +EEE K   L  HSE+LAIA+G++ +  G+ + I KNLRVC +CH   KL
Sbjct: 605 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 664

Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +S+++ RE++ RD  RFHHF  GVCSC DYW
Sbjct: 665 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 285/553 (51%), Gaps = 49/553 (8%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVA--MYAKCYD-FRKARQLFDRMGEKEDVVLWNSIISAYS 136
           IH  ++K G  +T++ ++ L+   + +  +D    A  +F+ + E  ++++WN++   ++
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEP-NLLIWNTMFRGHA 64

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            S   + AL L+  M  +GL+ N YTF   L++C  S     G +IH   +K G +L +Y
Sbjct: 65  LSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 124

Query: 197 VANALIAMYARCGKMTEAAGVLYQ-------------------------------LENKD 225
           V  +LI+MY + G++ +A  V  Q                               +  KD
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 184

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
            VSWN+M++G+ +     +A++ F+E+     +PD+   V+ VSA  +  ++  G+++H+
Sbjct: 185 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 244

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
           +    GF S+L+I N L+D+Y KC  V     +F  ++ +D ISW T+I GY   N + +
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKE 304

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVI-LNAI 402
           AL LF+ +   G   + + + S+L AC+ L  +   + IH YI +  KG+++      ++
Sbjct: 305 ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSL 364

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +D+Y KCG+I+ ++ VF+SI ++ + SW +MI  +  +G AN A ++F  M +  +E D 
Sbjct: 365 IDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 424

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVF 520
           IT V  LSA S   +L  G+ +    +++ + +   +     ++D+    G    A ++ 
Sbjct: 425 ITFVGLLSACSHSGMLDLGRHIFRS-MKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 483

Query: 521 NCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
           N ++ + D ++W S++ A  +HG    G+       K+E ++  P     L+ +YA   +
Sbjct: 484 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKN--PGSYVLLSNIYAT--A 539

Query: 577 GLINEGKKFLEIM 589
           G  NE  K   ++
Sbjct: 540 GRWNEVAKIRALL 552



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 231/498 (46%), Gaps = 74/498 (14%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F+ + +  +  WN M   +  + +P+  L  Y  M  LG+  + +TFP ++K+CA 
Sbjct: 41  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------- 123
            K    G +IHG VLK GYD   ++  SL++MY +      AR++FD+   ++       
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160

Query: 124 -----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
                                  DVV WN++IS Y+ +G   EAL LF+EM +  +  + 
Sbjct: 161 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 220

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            T V+ + AC  S+   LG ++H+     G    + + NALI +Y +CG++  A G+   
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 280

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           L  KD +SWN+++ G+   +LY +A+  F+E+  +G+ P+ V  ++ + A   LG +  G
Sbjct: 281 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 340

Query: 281 KELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           + +H Y  K  +G  +      +L+DMYAKC  +    +VF  +  +   SW  +I G+A
Sbjct: 341 RWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFA 400

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
            +     A ++F  ++   ++ D +    +L ACS                         
Sbjct: 401 MHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACS------------------------- 435

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIE-----SKDVVSWTSMISSYVHNGLANEALELFYLM 453
                      G +D  R++F S++     +  +  +  MI    H+GL  EA E   ++
Sbjct: 436 ---------HSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEE---MI 483

Query: 454 NEANVESDSITLVSALSA 471
           N   +E D +   S L A
Sbjct: 484 NTMEMEPDGVIWCSLLKA 501



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 137/288 (47%), Gaps = 11/288 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A+++FD++  + V +WNAM+  Y   G     LE +  M    +  D  T 
Sbjct: 164 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 223

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA    ++ G ++H  +   G+ S   IVN+L+ +Y KC +   A  LF+ +  
Sbjct: 224 VSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY 283

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN++I  Y+      EAL LF+EM R G   N  T ++ L AC       +G  
Sbjct: 284 K-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRW 342

Query: 182 IHAATVKSGQNLQVYVANA------LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           IH    K  +     VANA      LI MYA+CG +  A  V   + N+   SWN+M+ G
Sbjct: 343 IHVYINKRLKG----VANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFG 398

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           F  +     A   F  ++    +PD +  V  +SA    G L  G+ +
Sbjct: 399 FAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 446



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  LF+ +S + V +WN ++G Y         L  +  M   G S +  T
Sbjct: 264 LYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 323

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++ ACA L  ++ G  IH  + K   G  +      SL+ MYAKC D   A+Q+FD 
Sbjct: 324 MLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDS 383

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           +  +  +  WN++I  ++  G+   A  +F  M++  +  +  TFV  L AC  S    L
Sbjct: 384 ILNR-SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDL 442

Query: 179 GMEIHAAT---VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           G  I  +     K    L+ Y    +I +    G   EA  ++  +E   D V W S+L
Sbjct: 443 GRHIFRSMKEDYKITPKLEHY--GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 499



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 112/241 (46%), Gaps = 35/241 (14%)

Query: 379 SQTKEIHGYIIRKGLSDL-VILNAIVDVYGKCGNID---YSRNVFESIESKDVVSWTSMI 434
           S  + IH  +I+ GL +    L+ +++      + D   Y+ +VFE+I+  +++ W +M 
Sbjct: 1   SSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 60

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
             +  +     AL L+  M    +  +  T    L + +     ++G++++G +++ G++
Sbjct: 61  RGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYD 120

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNC-------------------------------V 523
           L+  V +SL+ MY + G L+ A KVF+                                +
Sbjct: 121 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEI 180

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
             KD++ W +MI+     G  K A++LF +M   +  PD  T ++++ AC+ S  I  G+
Sbjct: 181 PIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGR 240

Query: 584 K 584
           +
Sbjct: 241 Q 241



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 3/142 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A+Q+FD +  R++ +WNAM+  +  +G      + +SRMR   I  D  T
Sbjct: 367 MYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDIT 426

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN--SLVAMYAKCYDFRKARQLFDR 118
           F  ++ AC+    LD G  I    +K  Y  T  + +   ++ +      F++A ++ + 
Sbjct: 427 FVGLLSACSHSGMLDLGRHIF-RSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINT 485

Query: 119 MGEKEDVVLWNSIISAYSASGQ 140
           M  + D V+W S++ A    G 
Sbjct: 486 MEMEPDGVIWCSLLKACKMHGN 507


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/570 (37%), Positives = 349/570 (61%), Gaps = 3/570 (0%)

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
           A++A      L  G+++HA  I   +   + +G  L+ MY +C  ++    V  +M  + 
Sbjct: 48  AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 107

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SWTT+I+GY+Q   H++AL+LF  +   G   +   + +VL +CSG + + Q K++H 
Sbjct: 108 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 167

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
            +++    S + + ++++D+Y K  NI  +R VF+++  +DVVS T++IS Y   GL  E
Sbjct: 168 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 227

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL+LF  +    ++ + +T  + ++A S L+ L  GK+++  I+RK      ++ +SL+D
Sbjct: 228 ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLID 287

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY++CG L  + +VF+ +  + ++ W +M+   G HG G   I LF  +  E   PD +T
Sbjct: 288 MYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVT 346

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
            LA+L  CSH GL++EG    + +  +        HY C++DLLGR+  LE+A   + +M
Sbjct: 347 LLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENM 406

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
             E T  +W +LLGACRVH+N  +GE+VA+KLLE++P N GNYV++SN++AA+  WKDV 
Sbjct: 407 PFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVF 466

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
           +VR  M    + K PG SWI +   IH+F + ++ H    +I  K+ EI   + +  G+V
Sbjct: 467 KVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDI-KAAGFV 525

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
                VLH+V++E+K +ML GHSE+LAI +G++ +  G  IR+ KNLR+CVDCH+F K V
Sbjct: 526 PDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFV 585

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S+++ RE+ +RD NRFH    G C+CGDYW
Sbjct: 586 SKVYEREISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 224/414 (54%), Gaps = 7/414 (1%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M   G     + + AA+ AC +      G ++HA  + +     V++   L+ MY RCG 
Sbjct: 33  MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           + +A  VL ++  +  VSW +M++G+ Q + + +A+  F ++  AG  P++      +++
Sbjct: 93  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
                ++  GK++H+  +K  F S + +G++L+DMYAK   +    RVF  +  +D +S 
Sbjct: 153 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 212

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
           T II+GYAQ     +AL+LFR +  EG+  + +   +++ A SGL  +   K++H  I+R
Sbjct: 213 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 272

Query: 391 KGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
           K L   V L N+++D+Y KCG + YSR VF+++  + VVSW +M+  Y  +GL +E + L
Sbjct: 273 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 332

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYA 508
           F  +++  V+ DS+TL++ LS  S   ++ +G ++   +++ +   L       ++D+  
Sbjct: 333 FKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLG 391

Query: 509 RCGALDIA-NKVFNCVQTKDLILWTSMINANGLHGR---GKVAIDLFYKMEAES 558
           R G L+ A N + N        +W S++ A  +H     G++      +ME E+
Sbjct: 392 RSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPEN 445



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 203/401 (50%), Gaps = 8/401 (1%)

Query: 39  PLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS 98
           PLR     S M + G S     +   I AC   + L  G ++H  ++   Y    F+   
Sbjct: 26  PLR---AASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTR 82

Query: 99  LVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
           LV MY +C     AR + DRM E+  VV W ++IS YS + + +EAL LF +M R G + 
Sbjct: 83  LVTMYVRCGALDDARNVLDRMPER-SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIP 141

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           N YT    L +C        G ++H+  VK+     ++V ++L+ MYA+   + EA  V 
Sbjct: 142 NEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVF 201

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
             L  +D VS  ++++G+ Q  L  +A+  FR+L   G + + V     V+A   L +L 
Sbjct: 202 DTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLD 261

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
            GK++HA  +++     + + N+L+DMY+KC  + Y  RVF  M  +  +SW  ++ GY 
Sbjct: 262 YGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYG 321

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
           ++    + + LF+ +  E +  D + + +VL  CS    + +  +I   ++++  + L  
Sbjct: 322 RHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHT 380

Query: 399 --LNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
                I+D+ G+ G ++ + N+ E++  +   S W S++ +
Sbjct: 381 GHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGA 421



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 192/386 (49%), Gaps = 21/386 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG++ DA  + D++ +R+V +W  M+  Y      +  L+ + +M   G   + +T
Sbjct: 86  MYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYT 145

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +C+  + +  G ++H L++K  ++S  F+ +SL+ MYAK  + ++AR++FD + 
Sbjct: 146 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 205

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DVV   +IIS Y+  G   EAL LFR++   G+  N  TF   + A    +    G 
Sbjct: 206 ER-DVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGK 264

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  ++      V + N+LI MY++CGK+  +  V   +  +  VSWN+ML G+ ++ 
Sbjct: 265 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 324

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  + +  F++L     KPD V  +  +S     G +  G ++    +K+         +
Sbjct: 325 LGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKE--------QS 375

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTII-AGYAQNNCHLKALEL 349
            L+      C ++ +GR      A + I           W +++ A     N H+  L  
Sbjct: 376 ALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVA 435

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGL 375
            + +++E  +A   +I S + A +G+
Sbjct: 436 QKLLEMEPENAGNYVILSNIYAAAGM 461



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 128/250 (51%), Gaps = 1/250 (0%)

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           G A   C +  L     + L G  A      + + AC   + + + +++H  +I      
Sbjct: 16  GLALQRCFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRP 75

Query: 396 LVILNA-IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
            V L   +V +Y +CG +D +RNV + +  + VVSWT+MIS Y       EAL+LF  M 
Sbjct: 76  AVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKML 135

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
            A    +  TL + L++ S    + +GK+++  +++  F     V SSL+DMYA+   + 
Sbjct: 136 RAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQ 195

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A +VF+ +  +D++  T++I+     G  + A+DLF ++ +E    +H+TF  L+ A S
Sbjct: 196 EARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALS 255

Query: 575 HSGLINEGKK 584
               ++ GK+
Sbjct: 256 GLASLDYGKQ 265


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/678 (34%), Positives = 384/678 (56%), Gaps = 7/678 (1%)

Query: 163 FVAALQACEDSSFETLGMEIHA---ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
            +  L+   D+    +G  IH+    T ++ +N  + V N+LI  YA+  +++ A  +  
Sbjct: 32  LIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEV-NSLINFYAKVNQVSIAHNLFD 90

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLL 278
           ++  ++ VSW++++TG++ N    K ++  +++   G   P++     A+S+    G + 
Sbjct: 91  RMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVE 150

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
            G++ H   +K GF     + N L+ MY+KC  V     V+ ++   D +++ +I++   
Sbjct: 151 EGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLV 210

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLV 397
           +N    + LE+ R++  E +  D +   +    C+ LK +     +HG ++   +  D  
Sbjct: 211 ENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAY 270

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           + +AI+++YGKCG    +R VF+ ++S++VV WT++++S   NG   EAL LF  M + N
Sbjct: 271 VSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQEN 330

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           V+S+  T    L+A + LS  + G  L+G   + GF     V ++L++MYA+ G ++ A 
Sbjct: 331 VKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAK 390

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           KVF+ +  +D+I W +MI     HG GK A+ +F  M A    P+++TF  +L AC H G
Sbjct: 391 KVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLG 450

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L+ EG  +L  +   + + P  EHY C+V LL +   L EA  F+R+  ++     W  L
Sbjct: 451 LVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTL 510

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           L AC VH N  LG  VA+ +LE+DP + G Y L+SN++A  ++W  V +VR  MR   +K
Sbjct: 511 LNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIK 570

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K PG SWIEIGN  H F + D  H +  + Y+K+ E+   + +  GY      VLH+VE+
Sbjct: 571 KEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMI-KPLGYTPDIGAVLHDVED 629

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           E+K   L  HSE+LAIAYG+LK    + I + KNLR+C DCHS  +L+S++  R +VVRD
Sbjct: 630 EQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRD 689

Query: 818 ANRFHHFEAGVCSCGDYW 835
           ANRFHHF  G CSC DYW
Sbjct: 690 ANRFHHFRDGRCSCLDYW 707



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 264/519 (50%), Gaps = 14/519 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFI--VNSLVAMYAKCYDFRKARQLFDRMGE 121
           ++K  A  K+L  G  IH  ++     + + I  VNSL+  YAK      A  LFDRM E
Sbjct: 35  LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPE 94

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGM 180
           + +VV W+++++ Y  +G  L+ + L ++M   G V+ N Y    A+ +C D      G 
Sbjct: 95  R-NVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGR 153

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   +K+G +   YV NAL++MY++C  + +A GV  ++   D V++NS+L+  V+N 
Sbjct: 154 QCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENG 213

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              + ++  R +     K D+V  VNA S    L +L  G  +H   +      D  + +
Sbjct: 214 YLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSS 273

Query: 301 TLMDMYAKCCCVNYMGR-VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            +++MY K C  + M R VF  + +++ + WT ++A   QN C  +AL LF  ++ E + 
Sbjct: 274 AIINMYGK-CGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVK 332

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNV 418
           ++      +L AC+GL        +HG+  + G    V++ NA++++Y K G+I+ ++ V
Sbjct: 333 SNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKV 392

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  +  +D+++W +MI  + H+GL  +AL +F  M  A    + +T    LSA   L ++
Sbjct: 393 FSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLV 452

Query: 479 KKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           ++G   L+  + + G        + +V + ++ G L+ A         K D++ W +++N
Sbjct: 453 QEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLN 512

Query: 537 ANGLH---GRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           A  +H   G G+   +   +M+         T L+ +YA
Sbjct: 513 ACHVHQNYGLGRWVAEFVLEMDPNDVGT--YTLLSNIYA 549



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 238/477 (49%), Gaps = 10/477 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFT 60
           Y K   V  A  LFD++ +R V +W+A++  Y+ NG  L+V+     M   G +S + + 
Sbjct: 76  YAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYI 135

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I +C     ++ G + HGL+LK G+   +++ N+LV+MY+KC   + A  +++ + 
Sbjct: 136 LAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEV- 194

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D+V +NSI+S+   +G   E L + R M    +  +  TFV A   C       LG+
Sbjct: 195 PVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGL 254

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   + S      YV++A+I MY +CGK   A GV   L++++ V W +++    QN 
Sbjct: 255 HVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNG 314

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + +A+  F +++    K ++      ++A   L    NG  LH ++ K GF   + +GN
Sbjct: 315 CFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGN 374

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++MYAK   +    +VF  M  +D I+W  +I G++ +    KAL +F+ +       
Sbjct: 375 ALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHP 434

Query: 361 DVMIIGSVLMACSGLKCMSQT-KEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNV 418
           + +    VL AC  L  + +    +H  + + G+   L     IV +  K G ++ +RN 
Sbjct: 435 NYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNF 494

Query: 419 FESIESK-DVVSWTSMISS-YVHN--GLANEALELFYLMNEANVESDSITLVSALSA 471
             +   K DVV+W +++++ +VH   GL     E    M+  +V   + TL+S + A
Sbjct: 495 MRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDV--GTYTLLSNIYA 549



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 174/347 (50%), Gaps = 10/347 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  V DA  ++++V    +  +N++L + V NG     LE    M    +  D  T
Sbjct: 177 MYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVT 236

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F      CA LKDL  G  +HG +L    +   ++ ++++ MY KC     AR +FD + 
Sbjct: 237 FVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGL- 295

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  +VVLW +++++   +G   EAL LF +M++  + +N +T+   L AC   S    G 
Sbjct: 296 QSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGS 355

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H  + KSG    V V NALI MYA+ G +  A  V   + ++D ++WN+M+ GF  + 
Sbjct: 356 LLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHG 415

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIG 299
           L  KA+  F+++  A + P+ V     +SA G LG +  G     + +KQ G    L+  
Sbjct: 416 LGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHY 475

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTA--QDFISWTTIIAGYAQNNCHL 344
             ++ + +K   +N   R F +      D ++W T++     N CH+
Sbjct: 476 TCIVSLLSKTGQLN-EARNFMRTAPVKWDVVAWRTLL-----NACHV 516


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/515 (41%), Positives = 323/515 (62%), Gaps = 2/515 (0%)

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
           M   D +SW ++I G  +      AL  F+ ++   +  D   + SVL + + +K M   
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60

Query: 382 KEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
             +H  II+ G     ++N A++D+Y K G +D +  VF  +  KDVVSWTS+++ Y HN
Sbjct: 61  ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
           G   EA++LF  M  + V  D I + S LSA + L+++  G++++  +++ G     SV 
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           +SLV MYA+CG++  AN+ F+ + T+D+I WT++I     +GRGK ++  + +M A    
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
           PD+ITF+ LL+ACSH+GL+  G+ + E M   Y + P PEHYAC++DLLGR+  L EA  
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
            +  M + P A VW ALL ACRVH   ELGE+ AK L EL+P N   YV++SN+++A+ K
Sbjct: 301 LLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGK 360

Query: 681 WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
           W+D  ++R  MR  G+ K PG SWIE  +K+ +F++ D++H   +EIY K+ EI   L +
Sbjct: 361 WEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEII-MLIK 419

Query: 741 EGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHS 800
           E GYV    F LH+ ++E K   L  HSE+LA+A+G+L   +G+ IRI KNLRVC DCH+
Sbjct: 420 EAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHT 479

Query: 801 FCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             K  S+++ R +++RD+N FHHF  G CSCGDYW
Sbjct: 480 AMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 192/376 (51%), Gaps = 10/376 (2%)

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +E  D VSWNS++ G V+      A+ FF++++    K D+    + +++   +  + N 
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
             +H   IK GF +   + N L+DMYAK   ++    VF +M  +D +SWT+++ GY+ N
Sbjct: 61  ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
             + +A++LF  +++ G+  D + + SVL AC+ L  M   ++IH  +++ GL S L + 
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N++V +Y KCG+I  +   F+++ ++DV+SWT++I  Y  NG    +L+ +  M     +
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240

Query: 460 SDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
            D IT +  L A S   +L  G+          G        + ++D+  R G L  A  
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300

Query: 519 VFN-CVQTKDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           + N  V   D ++W +++ A  +H     G++A    +++E  +  P    ++ L    S
Sbjct: 301 LLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMP----YVMLSNMYS 356

Query: 575 HSGLINEGKKFLEIMR 590
            +G   +  +   +MR
Sbjct: 357 AAGKWEDAARIRRLMR 372



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 166/331 (50%), Gaps = 14/331 (4%)

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E +D V WNS+I      G   +AL  F++M+   +  + YT  + L +          +
Sbjct: 2   EFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAI 61

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   +K+G      V NALI MYA+ GK+  A  V  ++ +KD VSW S++TG+  N 
Sbjct: 62  SVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNG 121

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            Y +A++ F +++ +G  PDQ+   + +SA   L  +  G+++HA  +K G  S L + N
Sbjct: 122 SYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDN 181

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+ MYAKC  +    R F  M  +D ISWT +I GYAQN     +L+ +  +   G   
Sbjct: 182 SLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKP 241

Query: 361 DVMIIGSVLMAC-------SGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           D +    +L AC       SG        +++G  I+ G      +   +D+ G+ G + 
Sbjct: 242 DYITFIGLLFACSHNGLLGSGRAYFEAMDKVYG--IKPGPEHYACM---IDLLGRSGKLA 296

Query: 414 YSRNVF-ESIESKDVVSWTSMISS-YVHNGL 442
            ++ +  + + + D V W +++++  VH  L
Sbjct: 297 EAKGLLNQMVVAPDAVVWKALLAACRVHKEL 327



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 161/327 (49%), Gaps = 29/327 (8%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
           +WN+++   V  G     L  + +MR   + +D +T P V+ + A +K +     +H L+
Sbjct: 8   SWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLI 67

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           +K G+++   + N+L+ MYAK      A  +F +M +K DVV W S+++ YS +G   EA
Sbjct: 68  IKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDK-DVVSWTSLVTGYSHNGSYEEA 126

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
           + LF +M+  G+  +     + L AC + +    G +IHA  VKSG    + V N+L+ M
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           YA+CG + +A      +  +D +SW +++ G+ QN     ++QF+ ++   G KPD +  
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246

Query: 265 VNAVSASGRLGNLLNGKEL-----HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR-- 317
           +  + A    G L +G+         Y IK G            + YA  C ++ +GR  
Sbjct: 247 IGLLFACSHNGLLGSGRAYFEAMDKVYGIKPG-----------PEHYA--CMIDLLGRSG 293

Query: 318 -------VFYQM-TAQDFISWTTIIAG 336
                  +  QM  A D + W  ++A 
Sbjct: 294 KLAEAKGLLNQMVVAPDAVVWKALLAA 320



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 133/282 (47%), Gaps = 15/282 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G +  A  +F K+  + V +W +++  Y  NG     ++ + +MR+ G+  D   
Sbjct: 85  MYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIA 144

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA L  +D G +IH  ++K G +S+  + NSLV MYAKC     A + FD M 
Sbjct: 145 VASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMP 204

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DV+ W ++I  Y+ +G+   +L  + +M   G   +  TF+  L AC  +     G 
Sbjct: 205 TR-DVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGR 263

Query: 181 EIHAAT-----VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL-ENKDSVSWNSMLT 234
               A      +K G          +I +  R GK+ EA G+L Q+    D+V W ++L 
Sbjct: 264 AYFEAMDKVYGIKPGPEHYA----CMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLA 319

Query: 235 G-FVQNDLYCKAM--QFFRELQGAGQKPDQVCTVNAVSASGR 273
              V  +L    M  +   EL+     P  V   N  SA+G+
Sbjct: 320 ACRVHKELELGEMAAKNLFELEPMNSMP-YVMLSNMYSAAGK 360


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/637 (36%), Positives = 355/637 (55%), Gaps = 47/637 (7%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N ++A Y R G++ EA G+       D +SWN++++G+VQ     +A + F  + G    
Sbjct: 41  NGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGR--- 97

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
            D V     VS   R G+++  + L   A     V D+     ++  YA+   +    RV
Sbjct: 98  -DVVSWNIMVSGYARRGDMVEARRLFDAAP----VRDVFTWTAVVSGYAQNGMLEEARRV 152

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F  M  ++ +SW  ++A Y Q     +A ELF                  +M C      
Sbjct: 153 FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFN-----------------MMPCR----- 190

Query: 379 SQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
                           ++   N ++  Y + G ++ ++ VF+++  KD VSW +M+++Y 
Sbjct: 191 ----------------NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYS 234

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
             G + E L+LF  M       +       LS  + ++ L+ G +L+G +IR G+ +   
Sbjct: 235 QGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCF 294

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           V ++L+ MY +CG ++ A   F  ++ +D++ W +MI     HG GK A+++F  M   S
Sbjct: 295 VGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTS 354

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
             PD IT + +L ACSHSGL+ +G  +   M  D+ +   PEHY C++DLLGRA  L EA
Sbjct: 355 TKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEA 414

Query: 619 YQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
           +  ++ M  EP + +W ALLGA R+H N ELG   A+K+ EL+P N G YVL+SN++A+S
Sbjct: 415 HDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASS 474

Query: 679 RKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKL 738
            KW+D  ++R+ M   G+KK PG SWIE+ NK+H+F A D  H E ++IY  L ++  ++
Sbjct: 475 GKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRM 534

Query: 739 EREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDC 798
            ++ GYV+ T  VLH+VEEEEK  ML  HSE+LA+AYG+L    G  IR+ KNLRVC DC
Sbjct: 535 -KKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDC 593

Query: 799 HSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           H+  K +S + GR +++RD+NRFHHF  G CSCGDYW
Sbjct: 594 HNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 217/458 (47%), Gaps = 33/458 (7%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           AR  FD   EK D V WN +++AY  +G+  EA GLF       +++        +Q  +
Sbjct: 25  ARHYFDLAPEK-DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGK 83

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            S    L   +    V S         N +++ YAR G M EA  +      +D  +W +
Sbjct: 84  MSEARELFDRMPGRDVVSW--------NIMVSGYARRGDMVEARRLFDAAPVRDVFTWTA 135

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           +++G+ QN +  +A + F          D +   NAVS +  +   +  + +     K+ 
Sbjct: 136 VVSGYAQNGMLEEARRVF----------DAMPERNAVSWNAMVAAYIQRRMMD--EAKEL 183

Query: 292 F----VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
           F      ++   NT++  YA+   +     VF  M  +D +SW  ++A Y+Q  C  + L
Sbjct: 184 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 243

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVY 406
           +LF  +   G   +      VL  C+ +  +    ++HG +IR G      + NA++ +Y
Sbjct: 244 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 303

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            KCGN++ +RN FE +E +DVVSW +MI+ Y  +G   EALE+F +M   + + D ITLV
Sbjct: 304 FKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 363

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ 524
             L+A S   +++KG     + +   F +       + ++D+  R G L  A+ +   + 
Sbjct: 364 GVLAACSHSGLVEKGISYF-YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 422

Query: 525 -TKDLILWTSMINANGLHGR---GKVAIDLFYKMEAES 558
              D  +W +++ A+ +H     G+ A +  +++E E+
Sbjct: 423 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPEN 460



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 181/384 (47%), Gaps = 28/384 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +++A +LFD    R VFTW A++  Y  NG    +LE   R+       +A ++
Sbjct: 109 YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG----MLEEARRVFDAMPERNAVSW 164

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ A    + +D   ++  + + C   ++    N+++  YA+     +A+ +FD M +
Sbjct: 165 NAMVAAYIQRRMMDEAKELFNM-MPCRNVAS---WNTMLTGYAQAGMLEEAKAVFDTMPQ 220

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D V W ++++AYS  G   E L LF EM R G   N   F   L  C D +    GM+
Sbjct: 221 K-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQ 279

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +++G  +  +V NAL+AMY +CG M +A     ++E +D VSWN+M+ G+ ++  
Sbjct: 280 LHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGF 339

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ F  ++    KPD +  V  ++A    G +  G   + Y++   F      G T
Sbjct: 340 GKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS-YFYSMHHDF------GVT 392

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTII-AGYAQNNCHLKALELF 350
               +   C ++ +GR      A D +           W  ++ A     N  L      
Sbjct: 393 AKPEH-YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 451

Query: 351 RTVQLEGLDADVMIIGSVLMACSG 374
           +  +LE  +A + ++ S + A SG
Sbjct: 452 KIFELEPENAGMYVLLSNIYASSG 475



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 23/266 (8%)

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
           V D    N ++  +A    V+     F     +D +SW  ++A Y +N    +A  LF +
Sbjct: 3   VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS 62

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
                 + DV+   +++        MS+ +E+     R    D+V  N +V  Y + G++
Sbjct: 63  RT----EWDVISWNALMSGYVQWGKMSEAREL---FDRMPGRDVVSWNIMVSGYARRGDM 115

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             +R +F++   +DV +WT+++S Y  NG+  EA  +F  M E N    +++  + ++A 
Sbjct: 116 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERN----AVSWNAMVAAY 171

Query: 473 SSLSILKKGKELNGFIIRKGFNLEG--SVAS--SLVDMYARCGALDIANKVFNCVQTKDL 528
               ++ + KEL        FN+    +VAS  +++  YA+ G L+ A  VF+ +  KD 
Sbjct: 172 IQRRMMDEAKEL--------FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDA 223

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKM 554
           + W +M+ A    G  +  + LF +M
Sbjct: 224 VSWAAMLAAYSQGGCSEETLQLFIEM 249



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 18/248 (7%)

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
           + D V  N ++  +   G +  +R+ F+    KD VSW  M+++YV NG   EA  LF  
Sbjct: 3   VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-- 60

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
              +  E D I+  + +S       + + +EL  F    G ++     + +V  YAR G 
Sbjct: 61  --NSRTEWDVISWNALMSGYVQWGKMSEAREL--FDRMPGRDVVS--WNIMVSGYARRGD 114

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +  A ++F+    +D+  WT++++    +G  + A  +F  M       + +++ A++ A
Sbjct: 115 MVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAA 170

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
                +++E K+   +M C   +  W      ++    +A  LEEA     +M  +  A 
Sbjct: 171 YIQRRMMDEAKELFNMMPCR-NVASW----NTMLTGYAQAGMLEEAKAVFDTMP-QKDAV 224

Query: 633 VWCALLGA 640
            W A+L A
Sbjct: 225 SWAAMLAA 232



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++ DA   F+++ +R V +WN M+  Y  +G     LE +  MR      D  T
Sbjct: 302 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDIT 361

Query: 61  FPCVIKACAMLKDLDCG-AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ AC+    ++ G +  + +    G  +       ++ +  +     +A  L   M
Sbjct: 362 LVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDM 421

Query: 120 GEKEDVVLWNSIISA 134
             + D  +W +++ A
Sbjct: 422 PFEPDSTMWGALLGA 436


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/579 (38%), Positives = 352/579 (60%), Gaps = 3/579 (0%)

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +PD+      +    +LG L  GK +H + +   F  DL I N+L+ MYA+C  +    R
Sbjct: 71  EPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARR 130

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           +F +M  +D +SWT++I GYAQN+    AL LF  +  +G + +   + S++  C  +  
Sbjct: 131 LFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMAS 190

Query: 378 MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
            +  ++IH    + G  S++ + +++VD+Y +CG +  +  VF+ +  K+ VSW ++I+ 
Sbjct: 191 YNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAG 250

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           Y   G   EAL LF  M          T  + LS+ SS+  L++GK L+  +++    L 
Sbjct: 251 YARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLV 310

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
           G V ++L+ MYA+ G++  A KVF+ +   D++   SM+     HG GK A   F +M  
Sbjct: 311 GYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIR 370

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
               P+ ITFL++L ACSH+ L++EGK +  +MR  Y ++P   HYA +VDLLGRA  L+
Sbjct: 371 FGIEPNDITFLSVLTACSHARLLDEGKHYFGLMR-KYNIEPKVSHYATIVDLLGRAGLLD 429

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           +A  F+  M IEPT  +W ALLGA ++H N E+G   A+++ ELDP  PG + L++N++A
Sbjct: 430 QAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYA 489

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           ++ +W+DV +VR  M+ SG+KK P  SW+E+ N +H F+A D +H + ++I+K   ++ +
Sbjct: 490 SAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQ 549

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           K+ +E GYV  T  VL  V+++EK   L  HSE+LA+++ +L +  GS IRI KN+RVC 
Sbjct: 550 KI-KEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCG 608

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCHS  K VS +  RE++VRD NRFHHF  G CSCGDYW
Sbjct: 609 DCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 198/385 (51%), Gaps = 3/385 (0%)

Query: 54  ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           +  D   +  ++K C  L  L  G  +H  VL   +     I NSL+ MYA+C     AR
Sbjct: 70  LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           +LFD M  + D+V W S+I+ Y+ + +  +AL LF  M   G   N +T  + ++ C   
Sbjct: 130 RLFDEMPHR-DMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
           +    G +IHA   K G +  V+V ++L+ MYARCG + EA  V  +L  K+ VSWN+++
Sbjct: 189 ASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALI 248

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            G+ +     +A+  F  +Q  G +P +      +S+   +G L  GK LHA+ +K    
Sbjct: 249 AGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQK 308

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
               +GNTL+ MYAK   +    +VF ++   D +S  +++ GYAQ+    +A + F  +
Sbjct: 309 LVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEM 368

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNI 412
              G++ + +   SVL ACS  + + + K   G + +  +   V   A IVD+ G+ G +
Sbjct: 369 IRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLL 428

Query: 413 DYSRNVFESIESKDVVS-WTSMISS 436
           D +++  E +  +  V+ W +++ +
Sbjct: 429 DQAKSFIEEMPIEPTVAIWGALLGA 453



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 182/360 (50%), Gaps = 7/360 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGS+  A +LFD++  R + +W +M+  Y  N      L  + RM   G   + FT
Sbjct: 118 MYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFT 177

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++K C  +   +CG +IH    K G  S  F+ +SLV MYA+C    +A  +FD++G
Sbjct: 178 LSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLG 237

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +V  WN++I+ Y+  G+  EAL LF  MQR G     +T+ A L +C        G 
Sbjct: 238 CKNEVS-WNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGK 296

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KS Q L  YV N L+ MYA+ G + +A  V  +L   D VS NSML G+ Q+ 
Sbjct: 297 WLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHG 356

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A Q F E+   G +P+ +  ++ ++A      L  GK  H + + + +  + ++ +
Sbjct: 357 LGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGK--HYFGLMRKYNIEPKVSH 414

Query: 301 --TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTII-AGYAQNNCHLKALELFRTVQLE 356
             T++D+  +   ++       +M  +  ++ W  ++ A     N  + A    R  +L+
Sbjct: 415 YATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELD 474



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 125/291 (42%), Gaps = 58/291 (19%)

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
           +   L +  L++  ++E D     + L   + L  LK+GK ++  ++   F  +  + +S
Sbjct: 55  SKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNS 114

Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           L+ MYARCG+L+ A ++F+ +  +D++ WTSMI     + R   A+ LF +M ++   P+
Sbjct: 115 LLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPN 174

Query: 563 HITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYAC---------LVDLLGRAN 613
             T  +L+  C +    N G+   +I  C ++       Y C         LVD+  R  
Sbjct: 175 EFTLSSLVKCCGYMASYNCGR---QIHACCWK-------YGCHSNVFVGSSLVDMYARCG 224

Query: 614 HL-------------------------------EEAYQFVRSMQIE---PTAEVWCALLG 639
           +L                               EEA      MQ E   PT   + ALL 
Sbjct: 225 YLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLS 284

Query: 640 ACRVHSNKELGEIVAKKLLELDP---GNPGNYVLISNVFAASRKWKDVEQV 687
           +C      E G+ +   L++      G  GN +L  +++A S   +D E+V
Sbjct: 285 SCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLL--HMYAKSGSIRDAEKV 333


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/665 (35%), Positives = 379/665 (56%), Gaps = 11/665 (1%)

Query: 178 LGMEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           LG  +HA  VK+       ++AN LI MY++      A  VL     ++ VSW S+++G 
Sbjct: 24  LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGL 83

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            QN  +  A+  F E++  G  P+     C   AV AS RL   + GK++HA A+K G +
Sbjct: 84  AQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAV-ASLRLP--VTGKQIHALAVKCGRI 140

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            D+ +G +  DMY K    +   ++F ++  ++  +W   I+    +    +A+E F   
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEF 200

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
           +  G   + +     L ACS    +    ++HG + R G  +D+ + N ++D YGKC  I
Sbjct: 201 RRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQI 260

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             S  +F  +  K+ VSW S++++YV N    +A  L+    +  VE+    + S LSA 
Sbjct: 261 RSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSAC 320

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           + ++ L+ G+ ++   ++        V S+LVDMY +CG ++ + + F+ +  K+L+   
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLN 380

Query: 533 SMINANGLHGRGKVAIDLFYKMEAES--FAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           S+I      G+  +A+ LF  M       AP+++TF++LL ACS +G +  G K  + M+
Sbjct: 381 SLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMK 440

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
             Y ++P  EHY+C+VD+LGRA  +E+A++F++ M I+PT  VW AL  ACR+H    LG
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLG 500

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
            + A+ L +LDP + GN+VL+SN FAA+ +W +   VR  M+G G+KK  G SWI + N+
Sbjct: 501 ILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQ 560

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSER 770
           +H+F A+D+SH  + EI   L ++  K+E   GY    +  L+++EEEEK   +  HSE+
Sbjct: 561 VHAFQAKDRSHKMNKEIQTMLTKLRNKME-AAGYKPDLKLSLYDLEEEEKAAEVSHHSEK 619

Query: 771 LAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCS 830
           LA+A+G++       IRITKNLR+C DCHSF K VS    RE++VRD NRFH F+ G+CS
Sbjct: 620 LALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICS 679

Query: 831 CGDYW 835
           C DYW
Sbjct: 680 CKDYW 684



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 245/492 (49%), Gaps = 14/492 (2%)

Query: 77  GAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
           G  +H  ++K        F+ N L+ MY+K  D  ++ +L  R+    +VV W S++S  
Sbjct: 25  GRVVHARIVKTLDSPPPPFLANYLINMYSK-LDHPESARLVLRLTPARNVVSWTSLVSGL 83

Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
           + +G    AL  F EM+R G+  N +TF    +A         G +IHA  VK G+ L V
Sbjct: 84  AQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDV 143

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           +V  +   MY +     +A  +  ++  ++  +WN+ ++  V +    +A++ F E +  
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRI 203

Query: 256 GQKPDQV--CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
           G +P+ +  C      + G L +L  G ++H    + GF +D+ + N L+D Y KC  + 
Sbjct: 204 GGQPNSITFCGFLNACSDGLLLDL--GMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIR 261

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
               +F +M  ++ +SW +++A Y QN+   KA  L+   + E ++    +I SVL AC+
Sbjct: 262 SSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACA 321

Query: 374 GLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
           G+  +   + IH + ++  +  ++ + +A+VD+YGKCG I+ S   F+ +  K++V+  S
Sbjct: 322 GMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNS 381

Query: 433 MISSYVHNGLANEALELFYLMNE--ANVESDSITLVSALSAASSLSILKKG-KELNGFII 489
           +I  Y H G  + AL LF  M         + +T VS LSA S    ++ G K  +    
Sbjct: 382 LIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKS 441

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---GK 545
             G        S +VDM  R G ++ A +    +  K  I +W ++ NA  +HG+   G 
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGI 501

Query: 546 VAIDLFYKMEAE 557
           +A +  +K++ +
Sbjct: 502 LAAENLFKLDPK 513



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 209/443 (47%), Gaps = 16/443 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K      A  +      R V +W +++     NG     L  +  MR  G++ + FT
Sbjct: 51  MYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFT 110

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV KA A L+    G +IH L +KCG     F+  S   MY K      AR+LFD + 
Sbjct: 111 FPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 170

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ ++  WN+ IS     G+  EA+  F E +R+G   N+ TF   L AC D     LGM
Sbjct: 171 ER-NLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGM 229

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H    +SG +  V V N LI  Y +C ++  +  +  ++  K++VSW S++  +VQN 
Sbjct: 230 QMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNH 289

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA   +   +    +       + +SA   +  L  G+ +HA+A+K     ++ +G+
Sbjct: 290 EDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGS 349

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD- 359
            L+DMY KC C+    + F +M  ++ ++  ++I GYA       AL LF  +   G   
Sbjct: 350 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGP 409

Query: 360 -ADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             + M   S+L ACS       G+K     K  +G  I  G       + IVD+ G+ G 
Sbjct: 410 APNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYG--IEPGAEH---YSCIVDMLGRAGM 464

Query: 412 IDYSRNVFESIESKDVVS-WTSM 433
           ++ +    + +  K  +S W ++
Sbjct: 465 VEQAFEFIKKMPIKPTISVWGAL 487



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 197/412 (47%), Gaps = 34/412 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K     DA +LFD++ +R + TWNA +   V++G P   +E +   R +G   ++ T
Sbjct: 152 MYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSIT 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   + AC+    LD G ++HGLV + G+D+   + N L+  Y KC   R +  +F  MG
Sbjct: 212 FCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMG 271

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K + V W S+++AY  + +  +A  L+   ++  + T+ +   + L AC   +   LG 
Sbjct: 272 MK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGR 330

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IHA  VK+     ++V +AL+ MY +CG + ++     ++  K+ V+ NS++ G+    
Sbjct: 331 SIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQG 390

Query: 241 LYCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-----HAYAIKQGFV 293
               A+  F ++  +G G  P+ +  V+ +SA  R G + NG ++       Y I+ G  
Sbjct: 391 QVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPG-- 448

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI-----IAGYAQNNC------ 342
                     + Y+  C V+ +GR      A +FI    I     + G  QN C      
Sbjct: 449 ---------AEHYS--CIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKP 497

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT--KEIHGYIIRKG 392
           HL  L      +L+  D+   ++ S   A +G    + T  +E+ G  I+KG
Sbjct: 498 HLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKG 549


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/570 (37%), Positives = 349/570 (61%), Gaps = 3/570 (0%)

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
           A++A      L  G+++HA  I   +   + +G  L+ MY +C  ++    V  +M  + 
Sbjct: 16  AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
            +SWTT+I+GY+Q   H++AL+LF  +   G   +   + +VL +CSG + + Q K++H 
Sbjct: 76  VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 135

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
            +++    S + + ++++D+Y K  NI  +R VF+++  +DVVS T++IS Y   GL  E
Sbjct: 136 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 195

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           AL+LF  +    ++ + +T  + ++A S L+ L  GK+++  I+RK      ++ +SL+D
Sbjct: 196 ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLID 255

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY++CG L  + +VF+ +  + ++ W +M+   G HG G   I LF  +  E   PD +T
Sbjct: 256 MYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVT 314

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
            LA+L  CSH GL++EG    + +  +        HY C++DLLGR+  LE+A   + +M
Sbjct: 315 LLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENM 374

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
             E T  +W +LLGACRVH+N  +GE+VA+KLLE++P N GNYV++SN++AA+  WKDV 
Sbjct: 375 PFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVF 434

Query: 686 QVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYV 745
           +VR  M    + K PG SWI +   IH+F + ++ H    +I  K+ EI   + +  G+V
Sbjct: 435 KVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDI-KAAGFV 493

Query: 746 AQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLV 805
                VLH+V++E+K +ML GHSE+LAI +G++ +  G  IR+ KNLR+CVDCH+F K V
Sbjct: 494 PDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFV 553

Query: 806 SRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S+++ RE+ +RD NRFH    G C+CGDYW
Sbjct: 554 SKVYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 224/414 (54%), Gaps = 7/414 (1%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M   G     + + AA+ AC +      G ++HA  + +     V++   L+ MY RCG 
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           + +A  VL ++  +  VSW +M++G+ Q + + +A+  F ++  AG  P++      +++
Sbjct: 61  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
                ++  GK++H+  +K  F S + +G++L+DMYAK   +    RVF  +  +D +S 
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
           T II+GYAQ     +AL+LFR +  EG+  + +   +++ A SGL  +   K++H  I+R
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240

Query: 391 KGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
           K L   V L N+++D+Y KCG + YSR VF+++  + VVSW +M+  Y  +GL +E + L
Sbjct: 241 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 300

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYA 508
           F  +++  V+ DS+TL++ LS  S   ++ +G ++   +++ +   L       ++D+  
Sbjct: 301 FKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLG 359

Query: 509 RCGALDIA-NKVFNCVQTKDLILWTSMINANGLHGR---GKVAIDLFYKMEAES 558
           R G L+ A N + N        +W S++ A  +H     G++      +ME E+
Sbjct: 360 RSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPEN 413



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 199/391 (50%), Gaps = 5/391 (1%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M + G S     +   I AC   + L  G ++H  ++   Y    F+   LV MY +C  
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              AR + DRM E+  VV W ++IS YS + + +EAL LF +M R G + N YT    L 
Sbjct: 61  LDDARNVLDRMPER-SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLT 119

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           +C        G ++H+  VK+     ++V ++L+ MYA+   + EA  V   L  +D VS
Sbjct: 120 SCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVS 179

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
             ++++G+ Q  L  +A+  FR+L   G + + V     V+A   L +L  GK++HA  +
Sbjct: 180 CTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALIL 239

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           ++     + + N+L+DMY+KC  + Y  RVF  M  +  +SW  ++ GY ++    + + 
Sbjct: 240 RKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVIS 299

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVY 406
           LF+ +  E +  D + + +VL  CS    + +  +I   ++++  + L       I+D+ 
Sbjct: 300 LFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLL 358

Query: 407 GKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
           G+ G ++ + N+ E++  +   S W S++ +
Sbjct: 359 GRSGRLEKALNLIENMPFESTPSIWGSLLGA 389



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 192/386 (49%), Gaps = 21/386 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG++ DA  + D++ +R+V +W  M+  Y      +  L+ + +M   G   + +T
Sbjct: 54  MYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYT 113

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +C+  + +  G ++H L++K  ++S  F+ +SL+ MYAK  + ++AR++FD + 
Sbjct: 114 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DVV   +IIS Y+  G   EAL LFR++   G+  N  TF   + A    +    G 
Sbjct: 174 ER-DVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGK 232

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  ++      V + N+LI MY++CGK+  +  V   +  +  VSWN+ML G+ ++ 
Sbjct: 233 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 292

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  + +  F++L     KPD V  +  +S     G +  G ++    +K+         +
Sbjct: 293 LGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKE--------QS 343

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTII-AGYAQNNCHLKALEL 349
            L+      C ++ +GR      A + I           W +++ A     N H+  L  
Sbjct: 344 ALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVA 403

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGL 375
            + +++E  +A   +I S + A +G+
Sbjct: 404 QKLLEMEPENAGNYVILSNIYAAAGM 429



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 3/153 (1%)

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           +A++A      L +G++++  +I   +     + + LV MY RCGALD A  V + +  +
Sbjct: 15  AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
            ++ WT+MI+      R   A+DLF KM      P+  T   +L +CS    I +GK+  
Sbjct: 75  SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134

Query: 587 EIM-RCDYQLDPWPEHYACLVDLLGRANHLEEA 618
            ++ + +++   +    + L+D+  ++ +++EA
Sbjct: 135 SLLVKTNFESHMFVG--SSLLDMYAKSENIQEA 165


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/709 (33%), Positives = 395/709 (55%), Gaps = 41/709 (5%)

Query: 164 VAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI---AMYARCGKMTEAAGVLYQ 220
           ++ L  C+  + ++L M IHA  +K+G +   Y  + LI    +      +  A  V   
Sbjct: 6   LSLLHNCK--TLQSLRM-IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFET 62

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           ++  + + WN+M  G   +     A+  +  +   G  P+       + +  +      G
Sbjct: 63  IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCC----------------CVNYMG-------- 316
           +++H + +K G+  DL +  +L+ MY +                   V+Y          
Sbjct: 123 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 182

Query: 317 -------RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
                  ++F ++  +D +SW  +I+GYA+   + +ALELF+ +    +  D   + SV+
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 242

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            AC+    +   +++H +I   G  S+L I+NA++D+Y KCG ++ +  +FE +  KDV+
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVI 302

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           SW ++I  Y H  L  EAL LF  M  +    + +T++S L A + L  ++ G+ ++ +I
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYI 362

Query: 489 IR--KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
            +  KG     S  +SL+DMYA+CG ++ A +VF+ +  + L  W +MI    +HGR   
Sbjct: 363 NKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANA 422

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           A D+F +M      PD ITF+ LL ACSHSG+++ G+     M+ DY++ P  EHY C++
Sbjct: 423 AFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMI 482

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           DLLG +   +EA + + +M++EP   +WC+LL AC++++N ELGE  A+ L++++P NPG
Sbjct: 483 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPG 542

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
           +YVL+SN++A + +W +V ++R  +   G+KK PG S IEI + +H FI  DK H  + E
Sbjct: 543 SYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 602

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
           IY  L E  E L  E G+V  T  VL  +EEE K   L  HSE+LAIA+G++ +  G+ +
Sbjct: 603 IYGMLEE-MEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 661

Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            I KNLRVC +CH   KL+S+++ RE++ RD  RFHHF  GVCSC DYW
Sbjct: 662 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 286/561 (50%), Gaps = 49/561 (8%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVA--MYAKCYD-FRKARQLFDRMGEKEDVVLW 128
           K L     IH  ++K G  +T++ ++ L+   + +  +D    A  +F+ + E  ++++W
Sbjct: 13  KTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEP-NLLIW 71

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           N++   ++ S   + AL L+  M  +GL+ N YTF   L++C  S     G +IH   +K
Sbjct: 72  NTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLK 131

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQ---------------------------- 220
            G +L +YV  +LI+MY + G++ +A  V  Q                            
Sbjct: 132 LGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKM 191

Query: 221 ---LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
              +  KD VSWN+M++G+ +     +A++ F+E+     +PD+   V+ VSA  +  ++
Sbjct: 192 FDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASI 251

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+++H++    GF S+L+I N L+D+Y KC  V     +F  ++ +D ISW T+I GY
Sbjct: 252 ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGY 311

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSD 395
              N + +AL LF+ +   G   + + + S+L AC+ L  +   + IH YI +  KG+++
Sbjct: 312 THMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVAN 371

Query: 396 LVI-LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
                 +++D+Y KCG+I+ ++ VF+SI ++ + SW +MI  +  +G AN A ++F  M 
Sbjct: 372 ASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMR 431

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGA 512
           +  +E D IT V  LSA S   +L  G+ +    +++ + +   +     ++D+    G 
Sbjct: 432 KNEIEPDDITFVGLLSACSHSGMLDLGRHIFRS-MKEDYKITPKLEHYGCMIDLLGHSGL 490

Query: 513 LDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLA 568
              A ++ N ++ + D ++W S++ A  ++     G+       K+E ++  P     L+
Sbjct: 491 FKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKN--PGSYVLLS 548

Query: 569 LLYACSHSGLINEGKKFLEIM 589
            +YA   +G  NE  K   ++
Sbjct: 549 NIYAT--AGRWNEVAKIRALL 567



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 142/546 (26%), Positives = 250/546 (45%), Gaps = 75/546 (13%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F+ + +  +  WN M   +  + +P+  L  Y  M  LG+  + +TFP ++K+CA 
Sbjct: 56  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 115

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------- 123
            K    G +IHG VLK GYD   ++  SL++MY +      AR++FD+   ++       
Sbjct: 116 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 175

Query: 124 -----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
                                  DVV WN++IS Y+ +G   EAL LF+EM +  +  + 
Sbjct: 176 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 235

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            T V+ + AC  S+   LG ++H+     G    + + NALI +Y +CG++  A G+   
Sbjct: 236 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 295

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           L  KD +SWN+++ G+   +LY +A+  F+E+  +G+ P+ V  ++ + A   LG +  G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 355

Query: 281 KELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           + +H Y  K  +G  +      +L+DMYAKC  +    +VF  +  +   SW  +I G+A
Sbjct: 356 RWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFA 415

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
            +     A ++F  ++   ++ D +    +L ACS                         
Sbjct: 416 MHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACS------------------------- 450

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIE-----SKDVVSWTSMISSYVHNGLANEALELFYLM 453
                      G +D  R++F S++     +  +  +  MI    H+GL  EA E   ++
Sbjct: 451 ---------HSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEE---MI 498

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
           N   +E D +   S L A    + ++ G+     +I+      GS    L ++YA  G  
Sbjct: 499 NTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYV-LLSNIYATAGRW 557

Query: 514 DIANKV 519
           +   K+
Sbjct: 558 NEVAKI 563



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 137/288 (47%), Gaps = 11/288 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A+++FD++  + V +WNAM+  Y   G     LE +  M    +  D  T 
Sbjct: 179 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 238

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA    ++ G ++H  +   G+ S   IVN+L+ +Y KC +   A  LF+ +  
Sbjct: 239 VSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY 298

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN++I  Y+      EAL LF+EM R G   N  T ++ L AC       +G  
Sbjct: 299 K-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRW 357

Query: 182 IHAATVKSGQNLQVYVANA------LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           IH    K  +     VANA      LI MYA+CG +  A  V   + N+   SWN+M+ G
Sbjct: 358 IHVYINKRLKG----VANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFG 413

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           F  +     A   F  ++    +PD +  V  +SA    G L  G+ +
Sbjct: 414 FAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  LF+ +S + V +WN ++G Y         L  +  M   G S +  T
Sbjct: 279 LYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 338

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++ ACA L  ++ G  IH  + K   G  +      SL+ MYAKC D   A+Q+FD 
Sbjct: 339 MLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDS 398

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           +  +  +  WN++I  ++  G+   A  +F  M++  +  +  TFV  L AC  S    L
Sbjct: 399 ILNR-SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDL 457

Query: 179 GMEIHAAT---VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           G  I  +     K    L+ Y    +I +    G   EA  ++  +E   D V W S+L
Sbjct: 458 GRHIFRSMKEDYKITPKLEHY--GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 514



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 3/136 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A+Q+FD +  R++ +WNAM+  +  +G      + +SRMR   I  D  T
Sbjct: 382 MYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDIT 441

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN--SLVAMYAKCYDFRKARQLFDR 118
           F  ++ AC+    LD G  I    +K  Y  T  + +   ++ +      F++A ++ + 
Sbjct: 442 FVGLLSACSHSGMLDLGRHIFR-SMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINT 500

Query: 119 MGEKEDVVLWNSIISA 134
           M  + D V+W S++ A
Sbjct: 501 MEMEPDGVIWCSLLKA 516


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 255/751 (33%), Positives = 406/751 (54%), Gaps = 10/751 (1%)

Query: 1    MYGKCGSVLDAEQLFDK-----VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS 55
            MY KCG +  A Q+FD      VS R V   N+M+  Y         +  + RM VLG+ 
Sbjct: 605  MYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVR 664

Query: 56   VDAFTFPCVIKACAMLKDL--DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
             DAF+   V+       +   + G +IHG +L+   D   F+  +L+ MY K      A 
Sbjct: 665  PDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAW 724

Query: 114  QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
            ++F  + +K +VVLWN +I  +  S  C  +L L+   +   +   + +F  AL AC  S
Sbjct: 725  RVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQS 784

Query: 174  SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                 G +IH   VK G +   YV+ +L++MY++CG + EA  V   + +K    WN+M+
Sbjct: 785  ENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMV 844

Query: 234  TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
              +V+ND    A++ F  ++     PD     N +S     G    GK +HA   K+   
Sbjct: 845  AAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQ 904

Query: 294  SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            S   I + L+ +Y+KC C      VF  M  +D ++W ++I+G  +N    +AL++F  +
Sbjct: 905  STPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDM 964

Query: 354  QLE--GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCG 410
            + +   L  D  I+ SV+ AC+GL+ +S   ++HG +I+ G + ++ + ++++D+Y KCG
Sbjct: 965  KDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCG 1024

Query: 411  NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
              + +  VF S+  +++V+W SMIS Y  N L   ++ELF LM    +  DS+++ S L 
Sbjct: 1025 LPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLV 1084

Query: 471  AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
            A SS + L KGK L+G+ +R G   +  + ++L+DMY +CG    A  +F  +Q K LI 
Sbjct: 1085 AISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT 1144

Query: 531  WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
            W  MI   G HG  + A+ LF +++     PD +TFL+L+ AC+HSG + EGK F EIM+
Sbjct: 1145 WNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMK 1204

Query: 591  CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
             DY ++P  EHYA +VDLLGRA  LEEAY F+++M  E  + +W  LL A R H N ELG
Sbjct: 1205 QDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELG 1264

Query: 651  EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
             + A+KLL ++P     YV + N++  +    +  ++   M+  GL+K PG SWIE+ + 
Sbjct: 1265 ILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKERGLQKQPGCSWIEVSDI 1324

Query: 711  IHSFIARDKSHSESDEIYKKLAEITEKLERE 741
             + F +   S     EI+K L  +   +  E
Sbjct: 1325 SNVFFSGGSSSPIKAEIFKVLNRLKSNMVTE 1355



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 167/570 (29%), Positives = 299/570 (52%), Gaps = 15/570 (2%)

Query: 27   NAMLGAYVSNGEPLRVLETYSRM---RVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGL 83
            N+ + A +  GE L+ L  Y++      L  SV  FTFP ++KAC+ L +L  G  IHG 
Sbjct: 529  NSGIRALIQKGEYLQALHLYTKHDGSSPLWTSV--FTFPSLLKACSSLTNLSSGKTIHGS 586

Query: 84   VLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK----EDVVLWNSIISAYSASG 139
            ++  G+    FI  SLV MY KC     A Q+FD   +      DV + NS+I  Y    
Sbjct: 587  IIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFR 646

Query: 140  QCLEALGLFREMQRVGLVTNAYTFVAALQA-CEDSSFETL-GMEIHAATVKSGQNLQVYV 197
            +  E +G FR M  +G+  +A++    +   C++ +F    G +IH   +++  +   ++
Sbjct: 647  RFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFL 706

Query: 198  ANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTGFVQNDLYCKAMQFFRELQGAG 256
              ALI MY + G  T+A  V  ++E+K +V  WN M+ GF  +++   +++ +   +   
Sbjct: 707  KTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNS 766

Query: 257  QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             K        A+ A  +  N   G+++H   +K G  +D  +  +L+ MY+KC  V    
Sbjct: 767  VKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAE 826

Query: 317  RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
             VF  +  +    W  ++A Y +N+    ALELF  ++ + +  D   + +V+  CS   
Sbjct: 827  TVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFG 886

Query: 377  CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
                 K +H  + ++ + S   I +A++ +Y KCG    +  VF+S+E KD+V+W S+IS
Sbjct: 887  LYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLIS 946

Query: 436  SYVHNGLANEALELFYLM--NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
                NG   EAL++F  M  ++ +++ DS  + S ++A + L  L  G +++G +I+ G 
Sbjct: 947  GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQ 1006

Query: 494  NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
             L   V SSL+D+Y++CG  ++A KVF  ++ ++++ W SMI+    +   +++I+LF  
Sbjct: 1007 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNL 1066

Query: 554  MEAESFAPDHITFLALLYACSHSGLINEGK 583
            M ++   PD ++  ++L A S +  + +GK
Sbjct: 1067 MLSQGIFPDSVSITSVLVAISSTASLLKGK 1096


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/664 (34%), Positives = 381/664 (57%), Gaps = 8/664 (1%)

Query: 178 LGMEIHAATVKSGQN-LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           LG  +HA  +++    L  ++ N L+ MY++      A  VL     +  V+W S+++G 
Sbjct: 25  LGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGC 84

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           V N  +  A+  F  ++     P+         AS  L   + GK+LHA A+K G + D+
Sbjct: 85  VHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDV 144

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +G +  DMY+K         +F +M  ++  +W   ++   Q+   L A+  F+     
Sbjct: 145 FVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCV 204

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYS 415
             + + +   + L AC+ +  +   +++HG+I+R +   D+ + N ++D YGKCG+I  S
Sbjct: 205 DGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSS 264

Query: 416 RNVFESIES--KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
             VF  I S  ++VVSW S++++ V N     A  +F L     VE     + S LSA +
Sbjct: 265 ELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVF-LQARKEVEPTDFMISSVLSACA 323

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
            L  L+ G+ ++   ++        V S+LVD+Y +CG+++ A +VF  +  ++L+ W +
Sbjct: 324 ELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNA 383

Query: 534 MINANGLHGRGKVAIDLFYKMEAES--FAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
           MI      G   +A+ LF +M + S   A  ++T +++L ACS +G +  G +  E MR 
Sbjct: 384 MIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRG 443

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
            Y ++P  EHYAC+VDLLGR+  ++ AY+F++ M I PT  VW ALLGAC++H   +LG+
Sbjct: 444 RYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGK 503

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
           I A+KL ELDP + GN+V+ SN+ A++ +W++   VR  MR  G+KK  G SW+ + N++
Sbjct: 504 IAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRV 563

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
           H F A+D  H ++ EI   LA++  ++ ++ GYV      L ++EEEEK   ++ HSE++
Sbjct: 564 HVFQAKDSFHEKNSEIQAMLAKLRGEM-KKAGYVPDANLSLFDLEEEEKASEVWYHSEKI 622

Query: 772 AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           A+A+G++    G  IRITKNLR+C+DCHS  K +S++ GRE++VRD NRFH F+ G CSC
Sbjct: 623 ALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSC 682

Query: 832 GDYW 835
            DYW
Sbjct: 683 KDYW 686



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 255/506 (50%), Gaps = 16/506 (3%)

Query: 77  GAKIHGLVLKCGYDST--DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
           G  +H  +L+  +D+    F+ N LV MY+K  D   + QL   +     VV W S+IS 
Sbjct: 26  GRAVHAHILRT-HDTPLPSFLCNHLVNMYSK-LDLPNSAQLVLSLTNPRTVVTWTSLISG 83

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
              + +   AL  F  M+R  ++ N +TF    +A         G ++HA  +K G  L 
Sbjct: 84  CVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILD 143

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V+V  +   MY++ G   EA  +  ++ +++  +WN+ ++  VQ+     A+  F++   
Sbjct: 144 VFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLC 203

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
              +P+ +     ++A   + +L  G++LH + ++  +  D+ + N L+D Y KC  +  
Sbjct: 204 VDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVS 263

Query: 315 MGRVFYQMTA--QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
              VF ++ +  ++ +SW +++A   QN+   +A  +F   + E    D M I SVL AC
Sbjct: 264 SELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDFM-ISSVLSAC 322

Query: 373 SGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
           + L  +   + +H   ++  + + + + +A+VD+YGKCG+I+Y+  VF  +  +++V+W 
Sbjct: 323 AELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWN 382

Query: 432 SMISSYVHNGLANEALELFYLMNEAN--VESDSITLVSALSAASSLSILKKGKEL-NGFI 488
           +MI  Y H G  + AL LF  M   +  +    +TLVS LSA S    +++G ++     
Sbjct: 383 AMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMR 442

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---G 544
            R G        + +VD+  R G +D A +    +     I +W +++ A  +HG+   G
Sbjct: 443 GRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLG 502

Query: 545 KVAIDLFYKMEAESFAPDHITFLALL 570
           K+A +  ++++ +  + +H+ F  +L
Sbjct: 503 KIAAEKLFELDPDD-SGNHVVFSNML 527



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 213/449 (47%), Gaps = 21/449 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K      A+ +    + RTV TW +++   V N      L  +S MR   +  + FT
Sbjct: 52  MYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFT 111

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV KA A L     G ++H L LK G     F+  S   MY+K     +AR +FD M 
Sbjct: 112 FPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMP 171

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + ++  WN+ +S     G+CL+A+  F++   V    NA TF A L AC D     LG 
Sbjct: 172 HR-NLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGR 230

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN--KDSVSWNSMLTGFVQ 238
           ++H   V+S     V V N LI  Y +CG +  +  V  ++ +  ++ VSW S+L   VQ
Sbjct: 231 QLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQ 290

Query: 239 NDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           N    +A   F  LQ   + +P      + +SA   LG L  G+ +HA A+K     ++ 
Sbjct: 291 NHEEERACMVF--LQARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIF 348

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR--TVQL 355
           +G+ L+D+Y KC  + Y  +VF +M  ++ ++W  +I GYA       AL LF+  T   
Sbjct: 349 VGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGS 408

Query: 356 EGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGK 408
            G+    + + SVL ACS       GL+     +  +G  I  G         +VD+ G+
Sbjct: 409 CGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYG--IEPGAEHYA---CVVDLLGR 463

Query: 409 CGNIDYSRNVFESIESKDVVS-WTSMISS 436
            G +D +    + +     +S W +++ +
Sbjct: 464 SGLVDRAYEFIKRMPILPTISVWGALLGA 492


>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/679 (36%), Positives = 377/679 (55%), Gaps = 95/679 (13%)

Query: 212 TEAAGVLYQLENKDSVSWNSMLT----GFVQNDLYCKAMQFFRELQ-GAGQKPDQVCTVN 266
           T ++ + Y      SVSWNS+++     FV ND    A+  FRE+  G G  PD V  VN
Sbjct: 9   TTSSTIHYTRSPLISVSWNSIVSVYSHCFVPND----AVFLFREMTVGYGILPDTVGVVN 64

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            +  SG LG                      +GN L+DMYAKC  +    +VF +M  +D
Sbjct: 65  ILPVSGFLGFF--------------------VGNALVDMYAKCGKMEDASKVFERMRFKD 104

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV------------------ 368
            ++W  ++ GY+QN     AL LF  ++ E ++ DV+   SV                  
Sbjct: 105 VVTWNAMVTGYSQNGRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFR 164

Query: 369 -----------------LMACSGLKCMSQTKEIHGYIIR---KG-----LSDLVILNAIV 403
                            L AC+ +  +   KE H Y ++   KG       DL ++NA++
Sbjct: 165 QMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALI 224

Query: 404 DVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN--VE 459
           D+Y KC +++ +R +F+ I  + +DVV+WT MI  Y  +G AN AL+LF  M + +  + 
Sbjct: 225 DMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIV 284

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV---ASSLVDMYARCGALDIA 516
            +  T+   L A + L+ LK GK+++ +++R+   ++  V   A+ L+DMY++ G +D A
Sbjct: 285 PNDFTISCVLMACARLAALKFGKQIHAYVLRRS-RIDSDVLFVANCLIDMYSKSGDVDTA 343

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             VF+ +  ++ + WTS++   G+HG   V               D ITFL +LYACSHS
Sbjct: 344 QVVFDSMSKRNAVSWTSLLTGYGMHGAALVL--------------DGITFLVVLYACSHS 389

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           G+++ G      M  D+ +DP  EHYAC+ DL GRA  L EA + +  M +EPT  VW A
Sbjct: 390 GMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIA 449

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL ACR HSN+EL E  AKKLLEL   N G Y L+SN++A +R+WKDV ++R  M+ +G+
Sbjct: 450 LLSACRTHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGI 509

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           KK PG SW++    + +F   D++H +S +IY+ LA++ +++ +  GYV QT F LH+V+
Sbjct: 510 KKRPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRI-KAIGYVPQTNFSLHDVD 568

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           +EEK   L  HSE+LA+AY +L    G+ IRITKNLR+C D HS    +S +   E+++R
Sbjct: 569 DEEKGDQLLEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILR 628

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D++RFH F+ G CSC  YW
Sbjct: 629 DSSRFHQFKNGSCSCKGYW 647



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 233/477 (48%), Gaps = 92/477 (19%)

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           V WNSI+S YS      +A+ LFREM    G++ +    V  L     S F         
Sbjct: 24  VSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPV---SGF--------- 71

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY-- 242
                   L  +V NAL+ MYA+CGKM +A+ V  ++  KD V+WN+M+TG+ QN  +  
Sbjct: 72  --------LGFFVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFED 123

Query: 243 ---------------------------------CKAMQFFRELQGAGQKPDQVCTVNAVS 269
                                            C+AM  FR++ G   +P+ V  ++ +S
Sbjct: 124 ALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLS 183

Query: 270 ASGRLGNLLNGKELHAYAIK-------QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
           A   +G LL+GKE H Y++K            DL + N L+DMYAKC  +     +F ++
Sbjct: 184 ACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEI 243

Query: 323 TAQ--DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD----ADVMIIGSVLMACSGLK 376
             +  D ++WT +I GYAQ+     AL+LF   ++  +D     +   I  VLMAC+ L 
Sbjct: 244 CPKDRDVVTWTVMIGGYAQHGDANHALQLFS--EMFKIDNCIVPNDFTISCVLMACARLA 301

Query: 377 CMSQTKEIHGYIIRKGLSD---LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
            +   K+IH Y++R+   D   L + N ++D+Y K G++D ++ VF+S+  ++ VSWTS+
Sbjct: 302 ALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSL 361

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           ++ Y   G+   AL L           D IT +  L A S   ++ +G +L  + + K F
Sbjct: 362 LTGY---GMHGAALVL-----------DGITFLVVLYACSHSGMVDRGIDLF-YRMSKDF 406

Query: 494 NLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMINANGLHGRGKVA 547
            ++  V   + + D++ R G L  A ++ N +  +   ++W ++++A   H   ++A
Sbjct: 407 VVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELA 463



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 134/283 (47%), Gaps = 47/283 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + DA ++F+++  + V TWNAM+  Y  NG     L  + +MR   I +D  T
Sbjct: 83  MYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIELDVVT 142

Query: 61  FPCVIK-----------------------------------ACAMLKDLDCGAKIH---- 81
           +  VI                                    ACA +  L  G + H    
Sbjct: 143 WSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSV 202

Query: 82  GLVLKCGY-DSTD--FIVNSLVAMYAKCYDFRKARQLFDRMGEKE-DVVLWNSIISAYSA 137
             +LK  + D TD   ++N+L+ MYAKC     AR +FD +  K+ DVV W  +I  Y+ 
Sbjct: 203 KFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQ 262

Query: 138 SGQCLEALGLFREMQRVG--LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ--NL 193
            G    AL LF EM ++   +V N +T    L AC   +    G +IHA  ++  +  + 
Sbjct: 263 HGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSD 322

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            ++VAN LI MY++ G +  A  V   +  +++VSW S+LTG+
Sbjct: 323 VLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGY 365



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 132/264 (50%), Gaps = 16/264 (6%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKE---DVVLWNSIISAYSASGQCLEALGLFREMQR 153
           N++V  Y++   F  A  LF +M E++   DVV W+S+IS Y+  G   EA+ +FR+M  
Sbjct: 109 NAMVTGYSQNGRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCG 168

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK-------SGQNLQVYVANALIAMYA 206
                N  T ++ L AC        G E H  +VK       +     + V NALI MYA
Sbjct: 169 CRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYA 228

Query: 207 RCGKMTEAAGVLYQL--ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ--KPDQV 262
           +C  +  A  +  ++  +++D V+W  M+ G+ Q+     A+Q F E+        P+  
Sbjct: 229 KCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDF 288

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD--LQIGNTLMDMYAKCCCVNYMGRVFY 320
                + A  RL  L  GK++HAY +++  +    L + N L+DMY+K   V+    VF 
Sbjct: 289 TISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFD 348

Query: 321 QMTAQDFISWTTIIAGYAQNNCHL 344
            M+ ++ +SWT+++ GY  +   L
Sbjct: 349 SMSKRNAVSWTSLLTGYGMHGAAL 372



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 27/245 (11%)

Query: 1   MYGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG--ISV 56
           MY KC S+  A  +FD++    R V TW  M+G Y  +G+    L+ +S M  +   I  
Sbjct: 226 MYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVP 285

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD--FIVNSLVAMYAKCYDFRKARQ 114
           + FT  CV+ ACA L  L  G +IH  VL+     +D  F+ N L+ MY+K  D   A+ 
Sbjct: 286 NDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQV 345

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           +FD M  K + V W S+++ Y   G                LV +  TF+  L AC  S 
Sbjct: 346 VFDSM-SKRNAVSWTSLLTGYGMHG--------------AALVLDGITFLVVLYACSHSG 390

Query: 175 FETLGMEIHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS-VSWN 230
               G+++     K       ++ Y   A   ++ R G++ EA  ++  +  + + V W 
Sbjct: 391 MVDRGIDLFYRMSKDFVVDPGVEHYACMA--DLFGRAGRLCEATRLINDMSMEPTPVVWI 448

Query: 231 SMLTG 235
           ++L+ 
Sbjct: 449 ALLSA 453


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/633 (35%), Positives = 370/633 (58%), Gaps = 3/633 (0%)

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           MY++      A  +L     +  V+W ++++G VQN  +  A+ +F +++    KP+   
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
              A  AS  L     GK++HA A+K G ++D  +G +  DMY+K        R+F +M 
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
            ++   W   I+    +    KA++ F   +  G + D++   + L AC+  +C+   ++
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 384 IHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           +HG +IR G   D+ + N I+DVYGKC  ++ +  VF  +  ++ VSW +M+++   N  
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
             +A  +F +  +  +E     + S +SA + +S L+ G+ ++   ++     +  V S+
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSA 300

Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           LVDMY +CG+++   +VF+ +  ++L+ W +MI+     G   +A+ LF +M++E+ A +
Sbjct: 301 LVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-N 359

Query: 563 HITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV 622
           ++T + +L ACS  G +  G +  E MR  Y+++P  EHYAC+ D+LGRA  +E AY+FV
Sbjct: 360 YVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFV 419

Query: 623 RSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWK 682
           + M I PT  VW ALL ACRV+   ELG+I A  L +LDP + GN+VL+SN+FAA+ +W 
Sbjct: 420 QKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWD 479

Query: 683 DVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREG 742
           +   VR  M+  G+KK  G SW+   NK+H F A+D SH  + EI   L ++  +++   
Sbjct: 480 EATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQ-AA 538

Query: 743 GYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFC 802
           GY+  T + L+++EEEEK+  +  HSE++A+A+G++    G  IRITKNLR+C DCHS  
Sbjct: 539 GYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAF 598

Query: 803 KLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           K +S + GRE++VRD NRFH F    CSC D+W
Sbjct: 599 KFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 213/442 (48%), Gaps = 11/442 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K      A+ L      R V TW A++   V NG     L  +S+MR   I  + FT
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPC  KA   L     G +IH + LK G  +  F+  S   MY+K     +A++LFD M 
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + +V +WN+ IS     G+  +A+  F E +RVG   +  TF A L AC D+    LG 
Sbjct: 121 PR-NVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGR 179

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   ++SG    V VAN +I +Y +C ++  A  V   +  ++SVSW +M+    QND
Sbjct: 180 QLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQND 239

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA   F   +  G +       + +SA   +  L  G+ +HA A+K     D+ +G+
Sbjct: 240 EKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGS 299

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY KC  +    +VF++M  ++ +SW  +I+GYA       A+ LF  +Q E +  
Sbjct: 300 ALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVAN 359

Query: 361 DVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAIVDVYGKCGNIDYS 415
            V +I  VL ACS    +    EI       Y I  G         I D+ G+ G ++ +
Sbjct: 360 YVTLI-CVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYA---CIADMLGRAGMVERA 415

Query: 416 RNVFESIESKDVVS-WTSMISS 436
               + +  +  +S W +++++
Sbjct: 416 YEFVQKMPIRPTISVWGALLNA 437


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/537 (40%), Positives = 343/537 (63%), Gaps = 7/537 (1%)

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L++MY K   +N   ++F QM  ++ ISWTT+I+ Y++   H KALEL   +  + + 
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            +V    SVL +C+G   MS  + +H  II++GL SD+ + +A++DV+ K G  + + +V
Sbjct: 160 PNVYTYSSVLRSCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ + + D + W S+I  +  N  ++ ALELF  M  A   ++  TL S L A + L++L
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + G + +  I++  ++ +  + ++LVDMY +CG+L+ A +VFN ++ +D+I W++MI+  
Sbjct: 277 ELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL 334

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             +G  + A+ LF +M++    P++IT + +L+ACSH+GL+ +G  +   M+  Y +DP 
Sbjct: 335 AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV 394

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY C++DLLG+A  L++A + +  M+ EP A  W  LLGACRV  N  L E  AKK++
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVI 454

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
            LDP + G Y L+SN++A S+KW  VE++R RMR  G+KK PG SWIE+  +IH+FI  D
Sbjct: 455 ALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGD 514

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            SH +  E+ KKL ++  +L    GYV +T FVL ++E E+    L  HSE+LA+A+G++
Sbjct: 515 NSHPQIVEVSKKLNQLIHRLT-GIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 573

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                 +IRI KNLR+C DCH FCKL S+L  R +V+R   R+HHF+ G CSCGDYW
Sbjct: 574 TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 204/404 (50%), Gaps = 19/404 (4%)

Query: 41  RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV 100
           R ++    ++  G+  D+ T+  +IK C   + +  G  I   +   G+    F+VN L+
Sbjct: 44  RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103

Query: 101 AMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
            MY K      A QLFD+M ++ +V+ W ++ISAYS      +AL L   M R  +  N 
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQR-NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNV 162

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
           YT+ + L++C   S   +   +H   +K G    V+V +ALI ++A+ G+  +A  V  +
Sbjct: 163 YTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +   D++ WNS++ GF QN     A++ F+ ++ AG   +Q    + + A   L  L  G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
            + H + +K  +  DL + N L+DMY KC  +    RVF QM  +D I+W+T+I+G AQN
Sbjct: 280 MQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN 400
               +AL+LF  ++  G   + + I  VL ACS    +       G+   + +  L  ++
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED-----GWYYFRSMKKLYGID 392

Query: 401 AI-------VDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
            +       +D+ GK G +D +  +   +E   D V+W +++ +
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 193/383 (50%), Gaps = 23/383 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   + DA QLFD++ QR V +W  M+ AY       + LE    M    +  + +T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+++C  + D+     +H  ++K G +S  F+ ++L+ ++AK  +   A  +FD M 
Sbjct: 165 YSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D ++WNSII  ++ + +   AL LF+ M+R G +    T  + L+AC   +   LGM
Sbjct: 222 TG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   VK  Q+L   + NAL+ MY +CG + +A  V  Q++ +D ++W++M++G  QN 
Sbjct: 281 QAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-------KELHAY-AIKQGF 292
              +A++ F  ++ +G KP+ +  V  + A    G L +G       K+L+    +++ +
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELF 350
                    ++D+  K   ++   ++  +M  + D ++W T++ A   Q N  L      
Sbjct: 399 -------GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 451

Query: 351 RTVQLEGLDADVMIIGSVLMACS 373
           + + L+  DA    + S + A S
Sbjct: 452 KVIALDPEDAGTYTLLSNIYANS 474



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 166/338 (49%), Gaps = 18/338 (5%)

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIV 403
           +A++   ++Q  GL AD      ++  C   + + +   I  ++   G   ++ L N ++
Sbjct: 44  RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           ++Y K   ++ +  +F+ +  ++V+SWT+MIS+Y    +  +ALEL  LM   NV  +  
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T  S L + + +S ++    L+  II++G   +  V S+L+D++A+ G  + A  VF+ +
Sbjct: 164 TYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG- 582
            T D I+W S+I     + R  VA++LF +M+   F  +  T  ++L AC+   L+  G 
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL-GAC 641
           +  + I++ D  L         LVD+  +   LE+A +    M+ E     W  ++ G  
Sbjct: 281 QAHVHIVKYDQDLIL----NNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLA 335

Query: 642 RVHSNKELGEIVAKKLLEL--DPGNPGNYVLISNVFAA 677
           +   ++E     A KL E     G   NY+ I  V  A
Sbjct: 336 QNGYSQE-----ALKLFERMKSSGTKPNYITIVGVLFA 368


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/652 (36%), Positives = 363/652 (55%), Gaps = 34/652 (5%)

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLG 275
           V  Q+ N  +   N +L    ++    K +  +  L+       D+    + + A  ++ 
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
              +G E+H  A K GFV D  I   L+ MYA C  +     +F +M   D ++W  II 
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
           GY QN  +  AL LF  ++   +  D +I+ +VL AC     +S  + IH ++   G + 
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESK----------------------------- 425
           D  +  A++++Y  CG +D +R +++ + SK                             
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315

Query: 426 --DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
             D+V W++MIS Y  +    EAL+LF  M +     D IT++S +SA S +  L +   
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANW 375

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++ ++ R GF    SV ++L+DMYA+CG L  A +VF  +  K++I W+SMINA  +HG 
Sbjct: 376 IHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGN 435

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
              AI LF +M+  +  P+ +TF+ +LYAC H+GL+ EG+K    M  ++ + P  EHY 
Sbjct: 436 ADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 495

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C+VDL  RAN L +A + + +M   P   +W +L+ AC+VH   ELGE  AK+LLEL+P 
Sbjct: 496 CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPD 555

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           + G  V++SN++A  ++W DV  +R  M   G+ K   SS IEI N++H F+  D+ H +
Sbjct: 556 HDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQ 615

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
           SDEIY+KL E+  KL +  GY   T  +L ++EEE+K +++  HSE+LA+ YG++     
Sbjct: 616 SDEIYEKLDEVVSKL-KLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNE 674

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           S IRI KNLR+C DCHSF KLVS+++  E+VVRD  RFHH   G+CSC DYW
Sbjct: 675 SCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 243/480 (50%), Gaps = 43/480 (8%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           N ++   S S    + + L+  ++ +     + ++F + L+A    S    G+EIH    
Sbjct: 89  NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
           K G     ++   LIAMYA C ++ +A  +  ++ + D+V+WN ++ G+ QN  Y  A++
Sbjct: 149 KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208

Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
            F +++ +  KPD V     +SA G  GNL  G+ +H +    G+  D  +   L++MYA
Sbjct: 209 LFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYA 268

Query: 308 KCCCVNYMGR-------------------------------VFYQMTAQDFISWTTIIAG 336
            C  ++   +                               +F QM  +D + W+ +I+G
Sbjct: 269 NCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISG 328

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD- 395
           YA+++   +AL+LF  +  +    D + + SV+ ACS +  ++Q   IH Y+ R G    
Sbjct: 329 YAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRA 388

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           L + NA++D+Y KCGN+  +R VFE++  K+V+SW+SMI+++  +G A+ A++LF  M E
Sbjct: 389 LSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKE 448

Query: 456 ANVESDSITLVSALSAASSLSILKKGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALD 514
            N+E + +T +  L A     ++++G++L +  I   G +        +VD+Y R   L 
Sbjct: 449 VNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLR 508

Query: 515 IANKVFNCVQ-TKDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALL 570
            A ++   +    ++I+W S+++A  +HG    G+ A     ++E     PDH   L +L
Sbjct: 509 KAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELE-----PDHDGALVVL 563



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 216/461 (46%), Gaps = 42/461 (9%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAFTFPCVIKACAMLK 72
           +F ++        N +L     +  P + +  Y  +R +   ++D F+FP ++KA + + 
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
             + G +IHGL  K G+    FI   L+AMYA C     AR LFD+M    D V WN II
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHP-DAVAWNMII 194

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
             Y  +G   +AL LF +M+   +  ++      L AC  +   + G  IH     +G  
Sbjct: 195 DGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYA 254

Query: 193 LQVYVANALIAMYARCGKM-------------------------------TEAAGVLYQL 221
           +  ++  ALI MYA CG M                                +A  +  Q+
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQM 314

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             +D V W++M++G+ ++D   +A++ F E+      PDQ+  ++ +SA   +G L    
Sbjct: 315 IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN 374

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
            +H Y  + GF   L + N L+DMYAKC  +     VF  M  ++ ISW+++I  +A + 
Sbjct: 375 WIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHG 434

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLV-IL 399
               A++LFR ++   ++ + +    VL AC     + + +++   +I + G+S      
Sbjct: 435 NADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHY 494

Query: 400 NAIVDVYGKCGNIDYSRNVFESIES----KDVVSWTSMISS 436
             +VD+Y +    ++ R   E IE+     +V+ W S++S+
Sbjct: 495 GCMVDLYCRA---NFLRKAIELIETMPFAPNVIIWGSLMSA 532



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 164/376 (43%), Gaps = 37/376 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C  ++DA  LFDK+       WN ++  Y  NG     L  +  MR   +  D+  
Sbjct: 165 MYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVI 224

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC---------YD--- 108
              V+ AC    +L  G  IH  V   GY     +  +L+ MYA C         YD   
Sbjct: 225 LCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLS 284

Query: 109 -------------------FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                               + AR +FD+M E+ D+V W+++IS Y+ S Q  EAL LF 
Sbjct: 285 SKHLIVSTAMLSGYAKLGMVKDARFIFDQMIER-DLVCWSAMISGYAESDQPQEALKLFD 343

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EM +   V +  T ++ + AC           IH    +SG    + V NALI MYA+CG
Sbjct: 344 EMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCG 403

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + +A  V   +  K+ +SW+SM+  F  +     A++ FR ++    +P+ V  +  + 
Sbjct: 404 NLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLY 463

Query: 270 ASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           A G  G +  G++L +  I + G     +    ++D+Y   C  N++ +    +    F 
Sbjct: 464 ACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLY---CRANFLRKAIELIETMPFA 520

Query: 329 SWTTIIAGYAQNNCHL 344
               II G   + C +
Sbjct: 521 P-NVIIWGSLMSACQV 535


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/721 (33%), Positives = 404/721 (56%), Gaps = 49/721 (6%)

Query: 157 VTNAYTFVAALQACED-SSFETLGMEIHAATVKSGQNLQVYVANALIAMYA--RCGKMTE 213
           +   + ++  L+ C++ ++F+    +IH+  +K+G N  V+V + LI   A    G ++ 
Sbjct: 25  ILEQHPYLNLLEKCKNINTFK----QIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSY 80

Query: 214 AAGVLY--QLENKDSVS-WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           A  +    Q  +K +V  WNS++ G+  +     ++  F  +   G +P+         +
Sbjct: 81  ALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKS 140

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC-------------------- 310
             +      GK+LHA+A+K     +  +  +++ MYA                       
Sbjct: 141 CTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSF 200

Query: 311 -----------CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
                      C++   R+F ++  +D +SW  +I+GY Q+    +A+  F  +Q   + 
Sbjct: 201 TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVL 260

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            +   +  VL AC   +     K I  ++   G  S+L + NA++D+Y KCG  D +R +
Sbjct: 261 PNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIAREL 320

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ IE KDV+SW +MI  Y +  L  EAL LF +M  +NV+ + +T +  L A + L  L
Sbjct: 321 FDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGAL 380

Query: 479 KKGKELNGFI---IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             GK ++ +I   +R   N   S+ +SL+DMYA+CG ++ A +VF  + +++L  W +M+
Sbjct: 381 DLGKWVHAYIDKNLRNSSN--ASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAML 438

Query: 536 NANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           +   +HG  + A+ LF +M  +  F PD ITF+ +L AC+ +GL++ G ++   M  DY 
Sbjct: 439 SGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYG 498

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  +HY C++DLL RA   EEA   +++M++EP   +W +LL AC+ H   E GE VA
Sbjct: 499 ISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVA 558

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           ++L +L+P N G +VL+SN++A + +W DV ++R R+   G+KK PG + IEI   +H F
Sbjct: 559 ERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEF 618

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           +  DK H E + IYK L E+ +KL  E G+V  T  VL++++EE K   L  HSE+LAI+
Sbjct: 619 LVGDKFHPECNNIYKMLNEV-DKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAIS 677

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           +G++K+  G+ IRI KNLRVC +CHS  KL+S++F RE++ RD NRFHHF+ G CSC D 
Sbjct: 678 FGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDC 737

Query: 835 W 835
           W
Sbjct: 738 W 738



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 262/532 (49%), Gaps = 47/532 (8%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA--KCYDFRKARQLFD--RMGEKEDVVL 127
           K+++   +IH L++K G ++T F+ + L+   A     D   A  LF+  +   K +V +
Sbjct: 39  KNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFI 98

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           WNS+I  YS S   L +L LF  M   G+  N++TF    ++C  +     G ++HA  +
Sbjct: 99  WNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHAL 158

Query: 188 KSGQNLQVYVANALIAMYARCGKMT-------------------------------EAAG 216
           K   +   +V  ++I MYA  G+M                                +A  
Sbjct: 159 KLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARR 218

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG--RL 274
           +  ++  KD VSWN+M++G+VQ+  + +A+  F E+Q A   P++   V  +SA G  R 
Sbjct: 219 LFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRS 278

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G L  GK + ++    GF S+LQ+ N L+DMY KC   +    +F  +  +D ISW T+I
Sbjct: 279 GEL--GKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMI 336

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KG 392
            GY+  + + +AL LF  +    +  + +    +L AC+ L  +   K +H YI +  + 
Sbjct: 337 GGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRN 396

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY- 451
            S+  +  +++D+Y KCG I+ +  VF S+ S+++ SW +M+S +  +G A  AL LF  
Sbjct: 397 SSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSE 456

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARC 510
           ++N+     D IT V  LSA +   ++  G +     I   G + +      ++D+ AR 
Sbjct: 457 MVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARA 516

Query: 511 GALDIANKVF-NCVQTKDLILWTSMINANGLHGR---GKVAIDLFYKMEAES 558
              + A  +  N     D  +W S+++A   HGR   G+   +  +++E E+
Sbjct: 517 EKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPEN 568



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 195/405 (48%), Gaps = 39/405 (9%)

Query: 6   GSVLDAEQLFDKVSQR---TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFP 62
           G +  A  LF++  Q     VF WN+++  Y  +  PL  L  +SRM   G+  ++ TFP
Sbjct: 76  GDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFP 135

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC--YDFRK--------- 111
            + K+C   K    G ++H   LK        +  S++ MYA     DF +         
Sbjct: 136 FLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLR 195

Query: 112 --------------------ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
                               AR+LFD +  K DVV WN++IS Y  SG+  EA+  F EM
Sbjct: 196 DAVSFTALITGYVSQGCLDDARRLFDEIPVK-DVVSWNAMISGYVQSGRFEEAIVCFYEM 254

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
           Q   ++ N  T V  L AC  +    LG  I +    +G    + + NALI MY +CG+ 
Sbjct: 255 QEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGET 314

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
             A  +   +E KD +SWN+M+ G+    LY +A+  F  +  +  KP+ V  +  + A 
Sbjct: 315 DIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHAC 374

Query: 272 GRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
             LG L  GK +HAY  K     S+  +  +L+DMYAKC C+    RVF  M +++  SW
Sbjct: 375 ACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASW 434

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGL--DADVMIIGSVLMACS 373
             +++G+A +    +AL LF  +  +GL    D+  +G VL AC+
Sbjct: 435 NAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVG-VLSACT 478



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 153/310 (49%), Gaps = 4/310 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G + DA +LFD++  + V +WNAM+  YV +G     +  +  M+   +  +  T 
Sbjct: 207 YVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTM 266

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ AC   +  + G  I   V   G+ S   + N+L+ MY KC +   AR+LFD + E
Sbjct: 267 VVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEE 326

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN++I  YS      EAL LF  M R  +  N  TF+  L AC       LG  
Sbjct: 327 K-DVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKW 385

Query: 182 IHAATVKSGQN-LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +HA   K+ +N     +  +LI MYA+CG +  A  V   + +++  SWN+ML+GF  + 
Sbjct: 386 VHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHG 445

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQI 298
              +A+  F E+   G  +PD +  V  +SA  + G +  G +     I+  G    LQ 
Sbjct: 446 HAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQH 505

Query: 299 GNTLMDMYAK 308
              ++D+ A+
Sbjct: 506 YGCMIDLLAR 515



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 14/267 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG    A +LFD + ++ V +WN M+G Y         L  +  M    +  +  T
Sbjct: 307 MYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVT 366

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF-IVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ ACA L  LD G  +H  + K   +S++  +  SL+ MYAKC     A ++F  M
Sbjct: 367 FLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSM 426

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETL 178
             + ++  WN+++S ++  G    AL LF EM   GL   +  TFV  L AC  +    L
Sbjct: 427 HSR-NLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDL 485

Query: 179 GMEIHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
           G +   + ++       LQ Y    +I + AR  K  EA  ++  +E   D   W S+L+
Sbjct: 486 GHQYFRSMIQDYGISPKLQHY--GCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLS 543

Query: 235 -----GFVQNDLYCKAMQFFRELQGAG 256
                G V+   Y     F  E + AG
Sbjct: 544 ACKAHGRVEFGEYVAERLFQLEPENAG 570


>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g11460
 gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
 gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/614 (36%), Positives = 359/614 (58%), Gaps = 12/614 (1%)

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           S  WN  L       L+ +++  +R +  +G  PD       + +   L   ++G++LH 
Sbjct: 18  STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ--MTAQDFISWTTIIAGYAQNNCH 343
           +  K G  ++  +   L+ MY KC  V    +VF +   ++Q  + +  +I+GY  N+  
Sbjct: 78  HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAI 402
             A  +FR ++  G+  D + +  ++  C+  + +   + +HG  ++ GL S++ +LN+ 
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           + +Y KCG+++  R +F+ +  K +++W ++IS Y  NGLA + LEL+  M  + V  D 
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
            TLVS LS+ + L   K G E+   +   GF     V+++ + MYARCG L  A  VF+ 
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +  K L+ WT+MI   G+HG G++ + LF  M      PD   F+ +L ACSHSGL ++G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
            +    M+ +Y+L+P PEHY+CLVDLLGRA  L+EA +F+ SM +EP   VW ALLGAC+
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
           +H N ++ E+   K++E +P N G YVL+SN+++ S+  + + ++R+ MR    +K PG 
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEI-TEKLEREGGYVAQTQFVLHNVEEEEKV 761
           S++E   ++H F+A D+SH +++E+++ L E+ T  +E  G         +     EE  
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGN--------MDCDRGEEVS 549

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
                HSERLAIA+G+L S  G+ I + KNLRVC DCH F K VS++  R+ VVRDA+RF
Sbjct: 550 STTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF 609

Query: 822 HHFEAGVCSCGDYW 835
           H+F+ GVCSC DYW
Sbjct: 610 HYFKDGVCSCKDYW 623



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 200/421 (47%), Gaps = 14/421 (3%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
            WN  L            +  Y  M   G S DAF+FP ++K+CA L     G ++H  V
Sbjct: 20  PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV-VLWNSIISAYSASGQCLE 143
            K G ++  F++ +L++MY KC     AR++F+   +   + V +N++IS Y+A+ +  +
Sbjct: 80  TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
           A  +FR M+  G+  ++ T +  +  C    +  LG  +H   VK G + +V V N+ I 
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           MY +CG +     +  ++  K  ++WN++++G+ QN L    ++ + +++ +G  PD   
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
            V+ +S+   LG    G E+       GFV ++ + N  + MYA+C  +     VF  M 
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLK 376
            +  +SWT +I  Y  +      L LF  +   G+  D  +   VL ACS       GL+
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379

Query: 377 CMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMIS 435
                K    Y +  G       + +VD+ G+ G +D +    ES+    D   W +++ 
Sbjct: 380 LFRAMKR--EYKLEPGPEH---YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434

Query: 436 S 436
           +
Sbjct: 435 A 435



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 118/236 (50%), Gaps = 5/236 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV    +LFD++  + + TWNA++  Y  NG    VLE Y +M+  G+  D FT
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +CA L     G ++  LV   G+    F+ N+ ++MYA+C +  KAR +FD M 
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  +V W ++I  Y   G     L LF +M + G+  +   FV  L AC  S     G+
Sbjct: 320 VK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378

Query: 181 EIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           E+  A +K    L+    +   L+ +  R G++ EA   +  +    D   W ++L
Sbjct: 379 ELFRA-MKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433


>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 259/857 (30%), Positives = 429/857 (50%), Gaps = 145/857 (16%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           K+H  ++  G D++ F++N+L+ MY+ C     A ++F R     ++  WN+++ A+  S
Sbjct: 25  KLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVF-REANHANIFTWNTMLHAFFDS 83

Query: 139 GQCLEALGLFREMQRV-----------------GLVTNA--------------------Y 161
           G+  EA  LF EM  +                 GL  ++                    +
Sbjct: 84  GRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPF 143

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT--------- 212
           ++   ++AC   +     +++HA  +K     Q  + N+L+ MY +CG +T         
Sbjct: 144 SYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNI 203

Query: 213 ----------------------EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
                                 EA  V  ++  +D VSWN++++ F Q     + +  F 
Sbjct: 204 ESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFV 263

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           E+   G KP+ +   + +SA   + +L  G  LHA  ++     D  +G+ L+DMYAKC 
Sbjct: 264 EMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCG 323

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
           C+    RVF  +  Q+ +SWT +I+G AQ      AL LF  ++   +  D   + ++L 
Sbjct: 324 CLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILG 383

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGN------------------ 411
            CSG    +  + +HGY I+ G+   V + NAI+ +Y +CG+                  
Sbjct: 384 VCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTIS 443

Query: 412 -------------IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
                        ID +R  F+ +  ++V++W SM+S+Y+ +G + E ++L+ LM    V
Sbjct: 444 WTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAV 503

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           + D +T  +++ A + L+ +K G ++   + + G + + SVA+S+V MY+RCG +  A K
Sbjct: 504 KPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARK 563

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           VF+ +  K+LI W +M+ A   +G G  AI+ +  M      PDHI+++A+L        
Sbjct: 564 VFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVL-------- 615

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
                                       DLLGRA  L++A   +  M  +P A VW ALL
Sbjct: 616 ---------------------------SDLLGRAGLLDQAKNLIDGMPFKPNATVWGALL 648

Query: 639 GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
           GACR+H +  L E  AKKL+EL+  + G YVL++N++A S + ++V  +R  M+  G++K
Sbjct: 649 GACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRK 708

Query: 699 TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
           +PG SWIE+ N++H F   + SH + +E+Y KL E+ +K+E  G YV+    ++      
Sbjct: 709 SPGCSWIEVDNRVHVFTVDETSHPQINEVYVKLEEMMKKIEDTGRYVS----IVSCAHRS 764

Query: 759 EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
           +K      HSE+LA A+G+L       I++TKNLRVC DCH   KL+S +  REL++RD 
Sbjct: 765 QKY-----HSEKLAFAFGLLSLPPWMPIQVTKNLRVCNDCHLVIKLLSLVTSRELIMRDG 819

Query: 819 NRFHHFEAGVCSCGDYW 835
            RFHHF+ G CSC DYW
Sbjct: 820 FRFHHFKDGFCSCRDYW 836



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 245/534 (45%), Gaps = 70/534 (13%)

Query: 6   GSVLDAEQLFDKVSQ--RTVFTWNAMLGAYVSNGEPLRVLETY-SRMRVLGISV---DAF 59
           G + +AE LFD++    R   +W  M+  Y  NG P   ++T+ S +R     +   D F
Sbjct: 84  GRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPF 143

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC------------- 106
           ++ C +KAC  L       ++H  V+K    +   I NSLV MY KC             
Sbjct: 144 SYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNI 203

Query: 107 ------------------YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
                             Y   +A  +F RM E+ D V WN++IS +S  G  +  L  F
Sbjct: 204 ESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPER-DHVSWNTLISVFSQYGHGIRCLSTF 262

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            EM  +G   N  T+ + L AC   S    G  +HA  ++   +L  ++ + LI MYA+C
Sbjct: 263 VEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKC 322

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G +  A  V   L  ++ VSW  +++G  Q  L   A+  F +++ A    D+      +
Sbjct: 323 GCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATIL 382

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
                      G+ LH YAIK G  S + +GN ++ MYA+C         F  M  +D I
Sbjct: 383 GVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTI 442

Query: 329 SWTTIIAGYAQN---------------------NCHL----------KALELFRTVQLEG 357
           SWT +I  ++QN                     N  L          + ++L+  ++ + 
Sbjct: 443 SWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKA 502

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +  D +   + + AC+ L  +    ++  ++ + GL SD+ + N+IV +Y +CG I  +R
Sbjct: 503 VKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEAR 562

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            VF+SI  K+++SW +M++++  NGL N+A+E +  M     + D I+ V+ LS
Sbjct: 563 KVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLS 616



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 184/380 (48%), Gaps = 32/380 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y +     +A  +F ++ +R   +WN ++  +   G  +R L T+  M  LG   +  T+
Sbjct: 218 YSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTY 277

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA + DL  GA +H  +L+  +    F+ + L+ MYAKC     AR++F+ +GE
Sbjct: 278 GSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGE 337

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           +  V  W  +IS  +  G   +AL LF +M++  +V + +T    L  C   ++   G  
Sbjct: 338 QNQVS-WTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGEL 396

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +KSG +  V V NA+I MYARCG   +A+     +  +D++SW +M+T F QN  
Sbjct: 397 LHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGD 456

Query: 242 YCKA-------------------------------MQFFRELQGAGQKPDQVCTVNAVSA 270
             +A                               M+ +  ++    KPD V    ++ A
Sbjct: 457 IDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRA 516

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
              L  +  G ++ ++  K G  SD+ + N+++ MY++C  +    +VF  +  ++ ISW
Sbjct: 517 CADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISW 576

Query: 331 TTIIAGYAQNNCHLKALELF 350
             ++A +AQN    KA+E +
Sbjct: 577 NAMMAAFAQNGLGNKAIETY 596



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 245/565 (43%), Gaps = 102/565 (18%)

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEA--------------------- 214
             +  ++HA  + SG +  +++ N L+ MY+ CG + +A                     
Sbjct: 20  PPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHA 79

Query: 215 ---AGVLYQLEN---------KDSVSWNSMLTGFVQNDLYCKAMQFF----RELQGAGQK 258
              +G + + EN         +DSVSW +M++G+ QN L   +++ F    R+     Q 
Sbjct: 80  FFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQN 139

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC--------- 309
            D       + A G L +     +LHA+ IK    +   I N+L+DMY KC         
Sbjct: 140 CDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETV 199

Query: 310 ---------CCVNYM-------------GRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
                     C N M               VF +M  +D +SW T+I+ ++Q    ++ L
Sbjct: 200 FLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCL 259

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVY 406
             F  +   G   + M  GSVL AC+ +  +     +H  I+R   S D  + + ++D+Y
Sbjct: 260 STFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMY 319

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            KCG +  +R VF S+  ++ VSWT +IS     GL ++AL LF  M +A+V  D  TL 
Sbjct: 320 AKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLA 379

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           + L   S  +    G+ L+G+ I+ G +    V ++++ MYARCG  + A+  F  +  +
Sbjct: 380 TILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLR 439

Query: 527 DLILWTSMINA---NG----------------------------LHGRGKVAIDLFYKME 555
           D I WT+MI A   NG                             HG  +  + L+  M 
Sbjct: 440 DTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMR 499

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
           +++  PD +TF   + AC+    I  G + +  +   + L         +V +  R   +
Sbjct: 500 SKAVKPDWVTFATSIRACADLATIKLGTQVVSHVT-KFGLSSDVSVANSIVTMYSRCGQI 558

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGA 640
           +EA +   S+ ++     W A++ A
Sbjct: 559 KEARKVFDSIHVKNLIS-WNAMMAA 582



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 153/315 (48%), Gaps = 33/315 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F+ + ++   +W  ++      G     L  +++MR   + +D FT
Sbjct: 318 MYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFT 377

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FR--- 110
              ++  C+       G  +HG  +K G DS   + N+++ MYA+C D       FR   
Sbjct: 378 LATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMP 437

Query: 111 ---------------------KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                                +ARQ FD M E+ +V+ WNS++S Y   G   E + L+ 
Sbjct: 438 LRDTISWTAMITAFSQNGDIDRARQCFDMMPER-NVITWNSMLSTYIQHGFSEEGMKLYV 496

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
            M+   +  +  TF  +++AC D +   LG ++ +   K G +  V VAN+++ MY+RCG
Sbjct: 497 LMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCG 556

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
           ++ EA  V   +  K+ +SWN+M+  F QN L  KA++ + ++     KPD +  V  +S
Sbjct: 557 QIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLS 616

Query: 270 -ASGRLGNLLNGKEL 283
              GR G L   K L
Sbjct: 617 DLLGRAGLLDQAKNL 631


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/741 (34%), Positives = 398/741 (53%), Gaps = 89/741 (12%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           NS+VA Y      R AR+LFD M ++ +++ WN ++S Y  +G+  EA  +F  M    +
Sbjct: 52  NSMVAGYFANLMPRDARKLFDEMPDR-NIISWNGLVSGYMKNGEIDEARKVFDLMPERNV 110

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           V+                                         AL+  Y   GK+  A  
Sbjct: 111 VS---------------------------------------WTALVKGYVHNGKVDVAES 131

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           + +++  K+ VSW  ML GF+Q+     A + +  +       D +   + +    + G 
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGR 187

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           +   +E+     ++  ++      T++  Y +   V+   ++F  M  +  +SWT+++ G
Sbjct: 188 VDEAREIFDEMSERSVIT----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL 396
           Y QN     A ELF          +VM +  V+ AC                        
Sbjct: 244 YVQNGRIEDAEELF----------EVMPVKPVI-AC------------------------ 268

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
              NA++   G+ G I  +R VF+S++ ++  SW ++I  +  NG   EAL+LF LM + 
Sbjct: 269 ---NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            V     TL+S LS  +SL+ L  GK+++  ++R  F+++  VAS L+ MY +CG L  +
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKS 385

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME-AESFAPDHITFLALLYACSH 575
             +F+   +KD+I+W S+I+    HG G+ A+ +F +M  + S  P+ +TF+A L ACS+
Sbjct: 386 KLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSY 445

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           +G++ EG K  E M   + + P   HYAC+VD+LGRA    EA + + SM +EP A VW 
Sbjct: 446 AGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWG 505

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           +LLGACR HS  ++ E  AKKL+E++P N G Y+L+SN++A+  +W DV ++R  M+   
Sbjct: 506 SLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRL 565

Query: 696 LKKTPGSSWIEIGNKIHSFIARD-KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           ++K+PG SW E+ NK+H+F      SH E + I K L E+ + L RE GY     + LH+
Sbjct: 566 VRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDEL-DGLLREAGYNPDCSYALHD 624

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           V+EEEKV  L  HSERLA+AY +LK +EG  IR+ KNLRVC DCH+  K++S++  RE++
Sbjct: 625 VDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREII 684

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RDANRFHHF  G CSC DYW
Sbjct: 685 LRDANRFHHFRNGECSCKDYW 705



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/552 (23%), Positives = 246/552 (44%), Gaps = 68/552 (12%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           + G + +A +LFD    +++ +WN+M+  Y +N  P    + +  M              
Sbjct: 29  RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP------------- 75

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
                                     D      N LV+ Y K  +  +AR++FD M E+ 
Sbjct: 76  --------------------------DRNIISWNGLVSGYMKNGEIDEARKVFDLMPER- 108

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE-DSSFETLGMEI 182
           +VV W +++  Y  +G+   A  LF +M     V+     +  LQ    D + +   M  
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEM-- 166

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
               +    N+      ++I    + G++ EA  +  ++  +  ++W +M+TG+ QN+  
Sbjct: 167 ----IPDKDNI---ARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRV 219

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRL-GNLLNGKELHAYAIKQGFVSDLQIG-N 300
             A + F          D +     VS +  L G + NG+   A  + +       I  N
Sbjct: 220 DDARKIF----------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 269

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++    +   +    RVF  M  ++  SW T+I  + +N   L+AL+LF  +Q +G+  
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
               + S+L  C+ L  +   K++H  ++R     D+ + + ++ +Y KCG +  S+ +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMN-EANVESDSITLVSALSAASSLSIL 478
           +   SKD++ W S+IS Y  +GL  EAL++F  M    + + + +T V+ LSA S   ++
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMV 449

Query: 479 KKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           ++G ++    +   F ++   A  + +VDM  R G  + A ++ + +  + D  +W S++
Sbjct: 450 EEGLKIYES-MESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508

Query: 536 NANGLHGRGKVA 547
            A   H +  VA
Sbjct: 509 GACRTHSQLDVA 520



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/446 (22%), Positives = 200/446 (44%), Gaps = 35/446 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G + +A ++FD + +R V +W A++  YV NG+       + +M       +    
Sbjct: 89  YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKV 142

Query: 62  PCVIKACAMLKD--LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              +     L+D  +D   K++ ++     D  +    S++    K     +AR++FD M
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E+  V+ W ++++ Y  + +  +A  +F  M     V+     +  +Q       E L 
Sbjct: 199 SER-SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL- 256

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                  VK      V   NA+I+   + G++ +A  V   ++ ++  SW +++    +N
Sbjct: 257 --FEVMPVKP-----VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERN 309

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  F  +Q  G +P     ++ +S    L +L +GK++HA  ++  F  D+ + 
Sbjct: 310 GFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA 369

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-L 358
           + LM MY KC  +     +F +  ++D I W +II+GYA +    +AL++F  + L G  
Sbjct: 370 SVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGST 429

Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
             + +   + L ACS       GLK     + + G    K ++       +VD+ G+ G 
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGV---KPIT--AHYACMVDMLGRAGR 484

Query: 412 IDYSRNVFESIE-SKDVVSWTSMISS 436
            + +  + +S+    D   W S++ +
Sbjct: 485 FNEAMEMIDSMTVEPDAAVWGSLLGA 510



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 34/267 (12%)

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N  +    + G I  +R +F+S +SK + SW SM++ Y  N +  +A +LF  M + N+ 
Sbjct: 21  NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI- 79

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFI--IRKGFNL--EGSVAS--SLVDMYARCGAL 513
                         S + L  G   NG I   RK F+L  E +V S  +LV  Y   G +
Sbjct: 80  -------------ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
           D+A  +F  +  K+ + WT M+      GR   A  L Y+M  +    D+I   ++++  
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL-YEMIPDK---DNIARTSMIHGL 182

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
              G ++E ++  + M  +  +  W      +V   G+ N +++A +    M  E T   
Sbjct: 183 CKEGRVDEAREIFDEM-SERSVITW----TTMVTGYGQNNRVDDARKIFDVMP-EKTEVS 236

Query: 634 WCALLGA----CRVHSNKELGEIVAKK 656
           W ++L       R+   +EL E++  K
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVK 263



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 18/150 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           MY KCG ++ ++ +FD+   + +  WN+++  Y S+G     L+ +  M + G    +  
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD--FIVNSLVAMYAKCYD-------FR 110
           TF   + AC+    ++ G KI        Y+S +  F V  + A YA   D       F 
Sbjct: 435 TFVATLSACSYAGMVEEGLKI--------YESMESVFGVKPITAHYACMVDMLGRAGRFN 486

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
           +A ++ D M  + D  +W S++ A     Q
Sbjct: 487 EAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/691 (33%), Positives = 382/691 (55%), Gaps = 38/691 (5%)

Query: 182 IHAATVKSGQNLQVYVANALIAM---YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           IHA  +K+G +   Y  + L+ +         +  A  V   ++  + + WN+M  G   
Sbjct: 52  IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 111

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A++ +  +   G  P+       + +  +      G+++H + +K G+  DL +
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFV 171

Query: 299 GNTLMDMYAKCC----------------CVNYMG---------------RVFYQMTAQDF 327
             +L+ +Y +                   V+Y                 ++F ++  +D 
Sbjct: 172 HTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDV 231

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW  +I+GYA+   + +ALELF+ +    +  D   + +V+ AC+    +   +++H +
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSW 291

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           I   G  S+L I+N+++D+Y KCG ++ +  +FE +  KDV+SW ++I  Y H  L  EA
Sbjct: 292 IDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEA 351

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR--KGFNLEGSVASSLV 504
           L LF  M  +    + +T++S L A + L  +  G+ ++ +I +  K      S+ +SL+
Sbjct: 352 LLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLI 411

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMYA+CG ++ A++VFN +  K L  W +MI    +HGR   A D+F +M      PD I
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDI 471

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF+ LL ACS SG+++ G+     M  DY++ P  EHY C++DLLG +   +EA + + +
Sbjct: 472 TFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINN 531

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M++EP   +WC+LL AC++  N ELGE  A+ L++++P NPG YVL+SN++A + +W +V
Sbjct: 532 MEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEV 591

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            ++R  +   G+KK PG S IEI + +H FI  DK H  + EIY  L E+   LE+  G+
Sbjct: 592 AKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK-AGF 650

Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
           V  T  VL  +EEE K   L  HSE+LAIA+G++ +  G+ + I KNLRVC +CH   KL
Sbjct: 651 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 710

Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +S+++ RE++ RD  RFHHF  GVCSC DYW
Sbjct: 711 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 158/587 (26%), Positives = 279/587 (47%), Gaps = 89/587 (15%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDF---RKARQLFDRMG 120
           ++  C  L+ L     IH  ++K G  +T++ ++ L+ +      F     A  +F+ + 
Sbjct: 39  LLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQ 95

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  ++++WN++   ++ S   + AL L+  M  +GL+ N+YTF   L++C  S     G 
Sbjct: 96  EP-NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQ 154

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY--------------------- 219
           +IH   +K G +L ++V  +LI++Y + G++ +A  V                       
Sbjct: 155 QIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRG 214

Query: 220 ----------QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
                     ++  KD VSWN+M++G+ +   Y +A++ F+E+     +PD+   V  VS
Sbjct: 215 YIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVS 274

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A  + G++  G+++H++    GF S+L+I N+LMD+Y+KC  +     +F  +  +D IS
Sbjct: 275 ACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVIS 334

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI- 388
           W T+I GY   N + +AL LF+ +   G   + + + S+L AC+ L  +   + IH YI 
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYID 394

Query: 389 --IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
             ++   +   +  +++D+Y KCG+I+ +  VF SI  K + SW +MI  +  +G A+ A
Sbjct: 395 KRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAA 454

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
            ++F  M +  +E D IT V  LSA S                                 
Sbjct: 455 FDIFSRMRKIGIEPDDITFVGLLSACS--------------------------------- 481

Query: 507 YARCGALDIANKVFNCVQ-----TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
             R G LD+   +F  +      T  L  +  MI+  G  G  K A ++   ME E   P
Sbjct: 482 --RSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEME---P 536

Query: 562 DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
           D + + +LL AC   G +  G+ F + +     +   PE+  C V L
Sbjct: 537 DGVIWCSLLKACKIRGNVELGESFAQNL-----IKIEPENPGCYVLL 578



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 234/498 (46%), Gaps = 74/498 (14%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F+ + +  +  WN M   +  + +P+  L+ Y  M  LG+  +++TFP ++K+CA 
Sbjct: 87  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 146

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------- 123
            K    G +IHG VLK GYD   F+  SL+++Y +      AR++FDR   ++       
Sbjct: 147 SKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTAL 206

Query: 124 -----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
                                  DVV WN++IS Y+ +G   EAL LF+EM +  +  + 
Sbjct: 207 IKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDE 266

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            T V  + AC  S    LG ++H+     G    + + N+L+ +Y++CG++  A G+   
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEG 326

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           L  KD +SWN+++ G+   +LY +A+  F+E+  +G++P+ V  ++ + A   LG +  G
Sbjct: 327 LLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIG 386

Query: 281 KELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           + +H Y  K  +   +   +  +L+DMYAKC  +    +VF  +  +   SW  +I G+A
Sbjct: 387 RWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
            +     A ++F  ++  G++ D +    +L ACS                         
Sbjct: 447 MHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACS------------------------- 481

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIE-----SKDVVSWTSMISSYVHNGLANEALELFYLM 453
                    + G +D  R++F ++      +  +  +  MI    H+GL  EA E   ++
Sbjct: 482 ---------RSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEE---MI 529

Query: 454 NEANVESDSITLVSALSA 471
           N   +E D +   S L A
Sbjct: 530 NNMEMEPDGVIWCSLLKA 547



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 140/285 (49%), Gaps = 5/285 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A++LFD++  + V +WNAM+  Y   G     LE +  M    I  D  T 
Sbjct: 210 YASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTM 269

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA    ++ G ++H  +   G+ S   IVNSL+ +Y+KC +   A  LF+ +  
Sbjct: 270 VTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLY 329

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN++I  Y+      EAL LF+EM R G   N  T ++ L AC       +G  
Sbjct: 330 K-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRW 388

Query: 182 IHA---ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           IH      +KS  N    +  +LI MYA+CG +  A  V   + +K   SWN+M+ GF  
Sbjct: 389 IHVYIDKRLKSATNASS-LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           +     A   F  ++  G +PD +  V  +SA  R G L  G+ +
Sbjct: 448 HGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHI 492



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 11/240 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  A  LF+ +  + V +WN ++G Y         L  +  M   G   +  T
Sbjct: 310 LYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVT 369

Query: 61  FPCVIKACAMLKDLDCGAKIHGLV---LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              ++ ACA L  +D G  IH  +   LK   +++  +  SL+ MYAKC D   A Q+F+
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASS-LRTSLIDMYAKCGDIEAAHQVFN 428

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            +  K  +  WN++I  ++  G+   A  +F  M+++G+  +  TFV  L AC  S    
Sbjct: 429 SILHK-SLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLD 487

Query: 178 LGMEIHAATV---KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           LG  I        K    L+ Y    +I +    G   EA  ++  +E   D V W S+L
Sbjct: 488 LGRHIFRTMTQDYKITPKLEHY--GCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLL 545



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 13/147 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A Q+F+ +  +++ +WNAM+  +  +G      + +SRMR +GI  D  T
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDIT 472

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FRKAR 113
           F  ++ AC+    LD G  I   +      + D+ +   +  Y    D       F++A 
Sbjct: 473 FVGLLSACSRSGMLDLGRHIFRTM------TQDYKITPKLEHYGCMIDLLGHSGLFKEAE 526

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQ 140
           ++ + M  + D V+W S++ A    G 
Sbjct: 527 EMINNMEMEPDGVIWCSLLKACKIRGN 553


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/694 (34%), Positives = 378/694 (54%), Gaps = 44/694 (6%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS------WNSMLTG 235
           IHA  +K+G +   Y   AL  +   C       G+ Y +   D++       WN+M  G
Sbjct: 21  IHAQMIKTGLHNTNY---ALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRG 77

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
              +     A++ +  +   G  P+       + +  +      G++LH   +K GF  D
Sbjct: 78  HALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLD 137

Query: 296 LQIGNTLMDMYAK-----------------------CCCVNYMGR--------VFYQMTA 324
           L I  +L+ MY +                            Y  R        +F ++  
Sbjct: 138 LYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPV 197

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D +SW   I+GYA+   + +ALELF+ +    +  D   + +VL AC+    +   +++
Sbjct: 198 KDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQV 257

Query: 385 HGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           H +I   G   +L I+NA++D+Y KCG ++ +  +F+ + +KDV+SW ++I  Y H  L 
Sbjct: 258 HSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLY 317

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR--KGFNLEGSVAS 501
            EAL LF  M  +  + + +T++S LSA + L  +  G+ ++ +I +  KG     S+ +
Sbjct: 318 KEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 377

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
           SL+DMYA+CG ++ A +VF+ +  + L  W +MI    +HGR   A D+F +M      P
Sbjct: 378 SLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 437

Query: 562 DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
           D ITF+ LL ACSHSG+++ G+     M  DY+L P  EHY C++DL G +   +EA + 
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKM 497

Query: 622 VRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKW 681
           + +M++EP   +WC+LL AC++H N ELGE  A+ L++++P NPG+YVL+SN++A + +W
Sbjct: 498 INTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERW 557

Query: 682 KDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLERE 741
            +V + R  +   G+KK PG S IEI + +H FI  DK H  + EIY    E  E L  E
Sbjct: 558 NEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM-LEEMEVLLEE 616

Query: 742 GGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSF 801
            G+V  T  VL  +EEE K   L  HSE+LAIA+G++ +  G+ + I KNLRVC +CH  
Sbjct: 617 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 676

Query: 802 CKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            KL+S+++ RE++ RD  RFHHF  G CSC DYW
Sbjct: 677 TKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 285/554 (51%), Gaps = 50/554 (9%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVA--MYAKCYD-FRKARQLFDRMG 120
           ++  C  L+ L     IH  ++K G  +T++ ++ L+   + +  +D    A  +FD + 
Sbjct: 8   LLHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQ 64

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E   +++WN++   ++ S   + AL L+  M  +GL+ N+YTF   L++C  S     G 
Sbjct: 65  EPX-LLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQ 123

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV----------------------- 217
           ++H   +K G +L +Y+  +LI+MY + G++ +A  V                       
Sbjct: 124 QLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRG 183

Query: 218 --------LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
                     ++  KD VSWN+ ++G+ +   Y +A++ F+++     +PD+   V  +S
Sbjct: 184 XIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLS 243

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A  + G++  G+++H++    GF  +L+I N L+D+Y+KC  +     +F  ++ +D IS
Sbjct: 244 ACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVIS 303

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W T+I GY   N + +AL LF+ +   G   + + + S+L AC+ L  +   + IH YI 
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYID 363

Query: 390 R--KGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           +  KG+++   L  +++D+Y KCG+I+ ++ VF+S+ ++ + SW +MI  +  +G AN A
Sbjct: 364 KRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAA 423

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLV 504
            ++F  M +  +E D IT V  LSA S   +L  G+ +   + R  + L   +     ++
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRD-YKLMPKLEHYGCMI 482

Query: 505 DMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFA 560
           D+    G    A K+ N ++ + D ++W S++ A  +HG    G+       K+E E+  
Sbjct: 483 DLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPEN-- 540

Query: 561 PDHITFLALLYACS 574
           P     L+ +YA +
Sbjct: 541 PGSYVLLSNIYATA 554



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 238/487 (48%), Gaps = 37/487 (7%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +FD + +  +  WN M   +  + +P+  L+ Y  M  LG+  +++TFP ++K+CA 
Sbjct: 56  AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------- 123
                 G ++HG VLK G+D   +I  SL++MY +      A+++ D+   ++       
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175

Query: 124 -----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
                                  DVV WN+ IS Y+ +G   EAL LF++M +  +  + 
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            T V  L AC  S    LG ++H+     G    + + NALI +Y++CG++  A G+   
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQG 295

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           L NKD +SWN+++ G+   +LY +A+  F+++  +G+KP+ V  ++ +SA   LG +  G
Sbjct: 296 LSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIG 355

Query: 281 KELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           + +H Y  K  +G  +   +  +L+DMYAKC  +    +VF  M  +   SW  +I G+A
Sbjct: 356 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFA 415

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDL 396
            +     A ++F  ++  G++ D +    +L ACS    +   + I   + R  K +  L
Sbjct: 416 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKL 475

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
                ++D+ G  G    +  +  ++E   D V W S++ +   +G  N  L   Y  N 
Sbjct: 476 EHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHG--NVELGESYAQNL 533

Query: 456 ANVESDS 462
             +E ++
Sbjct: 534 IKIEPEN 540



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 3/284 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A ++FD++  + V +WNA +  Y   G     LE + +M    +  D  T 
Sbjct: 179 YASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTM 238

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA    ++ G ++H  +   G+     IVN+L+ +Y+KC +   A  LF  +  
Sbjct: 239 VTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSN 298

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN++I  Y+      EAL LF++M R G   N  T ++ L AC       +G  
Sbjct: 299 K-DVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRW 357

Query: 182 IHAATVK--SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           IH    K   G      +  +LI MYA+CG +  A  V   + N+   SWN+M+ GF  +
Sbjct: 358 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMH 417

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
                A   F  ++  G +PD +  V  +SA    G L  G+ +
Sbjct: 418 GRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  A  LF  +S + V +WN ++G Y         L  +  M   G   +  T
Sbjct: 279 LYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVT 338

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++ ACA L  +D G  IH  + K   G  +   +  SL+ MYAKC D   A+Q+FD 
Sbjct: 339 MLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDS 398

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  +  +  WN++I  ++  G+   A  +F  M++ G+  +  TFV  L AC  S    L
Sbjct: 399 MLNRS-LSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDL 457

Query: 179 GMEIHAATVKSGQ---NLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           G  I  +  +  +    L+ Y    +I +    G   EA  ++  +E   D V W S+L
Sbjct: 458 GRHIFRSMTRDYKLMPKLEHY--GCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLL 514



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 13/147 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A+Q+FD +  R++ +WNAM+  +  +G      + +SRMR  GI  D  T
Sbjct: 382 MYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDIT 441

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FRKAR 113
           F  ++ AC+    LD G  I   + +      D+ +   +  Y    D       F++A 
Sbjct: 442 FVGLLSACSHSGMLDLGRHIFRSMTR------DYKLMPKLEHYGCMIDLXGHSGLFKEAE 495

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQ 140
           ++ + M  + D V+W S++ A    G 
Sbjct: 496 KMINTMEMEPDGVIWCSLLKACKMHGN 522


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/559 (38%), Positives = 348/559 (62%), Gaps = 4/559 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +H + IK  ++  + +   L+ +Y KC C+     +F +M  ++ +SWT +I+ Y+Q
Sbjct: 109 GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQ 168

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVI 398
                +AL LF  +     + +     ++L +C G       ++IH   I++   S + +
Sbjct: 169 RGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFV 228

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            ++++D+Y K G I  +  VF  +  +DVV+ T++IS Y   GL  EAL+LF  +    +
Sbjct: 229 GSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGM 288

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
            S+S+T  S L+A S L+ L  GK+++  ++R G      + +SL+DMY++CG +  A +
Sbjct: 289 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 348

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSG 577
           +F+ +  +  I W +M+     HG  +  ++LF  M  E+   PD IT+LA+L  CSH  
Sbjct: 349 IFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQ 408

Query: 578 LINEGKK-FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           L + G + F  ++     ++P   HY C+VDLLGRA  +EEA+ F++ M   PTA +W +
Sbjct: 409 LEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGS 468

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LLG+CRVHS+ E+G IV +KLLEL+P N GNYV++SN++A++ KW+D+  +R  M+   +
Sbjct: 469 LLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAV 528

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
            K PG SW+E+   +H+F A D +H   +E+ KK+ E++ K  +E GYV     VL++V+
Sbjct: 529 TKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKF-KEDGYVPDLSCVLYDVD 587

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EE+K ++L GHSE+LA+A+G++ + EG+ IR+ KNLR+CVDCHSF K VSRL+ R +++R
Sbjct: 588 EEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILR 647

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D NRFH+   GVCSCGDYW
Sbjct: 648 DKNRFHNIVGGVCSCGDYW 666



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 226/427 (52%), Gaps = 17/427 (3%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
           S++  F+ +  L    S+G+   + E   +M +LG  V    +  ++  C   + +  G 
Sbjct: 54  SRQISFSPSPNLKTLCSSGQ---LKEALLQMAILGREVKFEGYDTILNECVSQRAIREGQ 110

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H  ++K  Y  + ++   L+ +Y KC     AR++FD M +K +VV W ++ISAYS  
Sbjct: 111 RVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK-NVVSWTAMISAYSQR 169

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS-SFETLGMEIHAATVKSGQNLQVYV 197
           G   EAL LF EM R     N +TF   L +C  S  FET G +IH+  +K      ++V
Sbjct: 170 GFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFET-GRQIHSIAIKRNYESHMFV 228

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
            ++L+ MYA+ G++ +A GV + L  +D V+  ++++G+ Q  L  +A++ FR+LQ  G 
Sbjct: 229 GSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGM 288

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
             + V   + ++A   L  L +GK++H++ ++ G  S + + N+L+DMY+KC  V Y  R
Sbjct: 289 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 348

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLK 376
           +F  M  +  ISW  ++ GY+++    + LELF+ ++ E  +  D +   +VL  CS  +
Sbjct: 349 IFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQ 408

Query: 377 CMSQTKEIHGYII--RKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS---- 429
                 EI   ++  + G+  D+     +VD+ G+ G ++     F+ I+    V     
Sbjct: 409 LEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVE---EAFDFIKKMPFVPTAAI 465

Query: 430 WTSMISS 436
           W S++ S
Sbjct: 466 WGSLLGS 472



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 175/349 (50%), Gaps = 29/349 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  + DA ++FD++ Q+ V +W AM+ AY   G     L  +  M       + FT
Sbjct: 134 LYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFT 193

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ +C      + G +IH + +K  Y+S  F+ +SL+ MYAK      A  +F  + 
Sbjct: 194 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DVV   +IIS Y+  G   EAL LFR++Q  G+ +N+ T+ + L A    +    G 
Sbjct: 254 ER-DVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGK 312

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  ++SGQ   V + N+LI MY++CG +  A  +   +  +  +SWN+ML G+ ++ 
Sbjct: 313 QVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHG 372

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVS--ASGRLG--------NLLNGKELHAYAIK 289
           +  + ++ F+ ++   + KPD +  +  +S  + G+L         N++NGK+       
Sbjct: 373 MAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKD------- 425

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
            G   D  IG+     Y   C V+ +GR      A DFI     +   A
Sbjct: 426 -GIEPD--IGH-----YG--CVVDLLGRAGRVEEAFDFIKKMPFVPTAA 464



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 63/122 (51%)

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           + L+   S   +++G+ ++  +I+  +     + + L+ +Y +C  L  A ++F+ +  K
Sbjct: 95  TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK 154

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           +++ WT+MI+A    G    A++LF +M      P+H TF  +L +C  S     G++  
Sbjct: 155 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 214

Query: 587 EI 588
            I
Sbjct: 215 SI 216


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/608 (37%), Positives = 357/608 (58%), Gaps = 18/608 (2%)

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL-------LNGKELHAYAIKQGFV 293
           ++ + +    E +    K + V  ++ VS    L  L       + G+  HA  I+ G  
Sbjct: 16  IHIRKLTVISEAKPESSKVENVVHIDRVSNLHYLLQLCAKTRSSMGGRACHAQIIRIGLE 75

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            D+   N L++MY+KC  V+   + F +M  +  +SW T+I    QN    +AL+L   +
Sbjct: 76  MDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQM 135

Query: 354 QLEGLDADVMIIGSVL----MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
           Q EG   +   I SVL      C+ L+CM    ++H + I+  + S+  +  A++ VY K
Sbjct: 136 QREGTPFNEFTISSVLCNCAFKCAILECM----QLHAFSIKAAIDSNCFVGTALLHVYAK 191

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           C +I  +  +FES+  K+ V+W+SM++ YV NG   EAL +F        + D   + SA
Sbjct: 192 CSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSA 251

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKD 527
           +SA + L+ L +GK+++    + GF     V+SSL+DMYA+CG +  A  VF  V + + 
Sbjct: 252 VSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRS 311

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           ++LW +MI+    H R   A+ LF KM+   F PD +T++ +L ACSH GL  EG+K+ +
Sbjct: 312 IVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFD 371

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
           +M   + L P   HY+C++D+LGRA  + +AY  +  M    T+ +W +LL +C+++ N 
Sbjct: 372 LMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNI 431

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           E  EI AK L E++P N GN++L++N++AA++KW +V + R  +R + ++K  G+SWIEI
Sbjct: 432 EFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKERGTSWIEI 491

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGH 767
            NKIHSF   +++H + D+IY KL  +  +L++   Y   T   LH+VEE  K  +L  H
Sbjct: 492 KNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKL-NYKVDTSNDLHDVEENRKQMLLRHH 550

Query: 768 SERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
           SE+LAI +G++       IRI KNLR+C DCH+F KLVS+   RE++VRD NRFHHF+ G
Sbjct: 551 SEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVRDTNRFHHFKDG 610

Query: 828 VCSCGDYW 835
            CSCG++W
Sbjct: 611 FCSCGEFW 618



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 220/428 (51%), Gaps = 9/428 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++ CA  +    G   H  +++ G +      N L+ MY+KC     AR+ F+ M  K 
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVK- 107

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            +V WN++I A + + +  EAL L  +MQR G   N +T  + L  C         M++H
Sbjct: 108 SLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLH 167

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           A ++K+  +   +V  AL+ +YA+C  + +A+ +   +  K++V+W+SM+ G+VQN  + 
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHE 227

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+  FR  Q  G   D     +AVSA   L  L+ GK++HA + K GF S++ + ++L+
Sbjct: 228 EALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLI 287

Query: 304 DMYAKCCCVNYMGRVFYQ-MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           DMYAKC C+     VF   +  +  + W  +I+G+A++    +A+ LF  +Q  G   D 
Sbjct: 288 DMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDD 347

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVI-LNAIVDVYGKCGNIDYSRNVFE 420
           +    VL ACS +    + ++    ++R+  LS  V+  + ++D+ G+ G +  + ++ E
Sbjct: 348 VTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIE 407

Query: 421 SIESKDVVS-WTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +      S W S+++S   Y +   A  A +  + M E N   + I L +  +A     
Sbjct: 408 RMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEM-EPNNAGNHILLANIYAANKKWD 466

Query: 477 ILKKGKEL 484
            + + ++L
Sbjct: 467 EVARARKL 474



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 173/331 (52%), Gaps = 14/331 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  V  A + F+++  +++ +WN ++GA   N E    L+   +M+  G   + FT
Sbjct: 87  MYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFT 146

Query: 61  FPCVIKACAM-LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+  CA     L+C  ++H   +K   DS  F+  +L+ +YAKC   + A Q+F+ M
Sbjct: 147 ISSVLCNCAFKCAILEC-MQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESM 205

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK + V W+S+++ Y  +G   EAL +FR  Q +G   + +   +A+ AC   +    G
Sbjct: 206 PEK-NAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEG 264

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ--LENKDSVSWNSMLTGFV 237
            ++HA + KSG    +YV+++LI MYA+CG + EA  +++Q  LE +  V WN+M++GF 
Sbjct: 265 KQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAY-LVFQGVLEVRSIVLWNAMISGFA 323

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           ++    +AM  F ++Q  G  PD V  V  ++A   +G    G++     ++Q  +S   
Sbjct: 324 RHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSV 383

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
           +  +        C ++ +GR      A D I
Sbjct: 384 LHYS--------CMIDILGRAGLVHKAYDLI 406



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 4/238 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC S+ DA Q+F+ + ++   TW++M+  YV NG     L  +   +++G   D F 
Sbjct: 188 VYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFM 247

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + ACA L  L  G ++H +  K G+ S  ++ +SL+ MYAKC   R+A  +F  + 
Sbjct: 248 ISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVL 307

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E   +VLWN++IS ++   +  EA+ LF +MQ+ G   +  T+V  L AC        G 
Sbjct: 308 EVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQ 367

Query: 181 EIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
           +     V+   NL   V +   +I +  R G + +A  ++ ++  N  S  W S+L  
Sbjct: 368 KYFDLMVRQ-HNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLAS 424


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/567 (37%), Positives = 351/567 (61%), Gaps = 8/567 (1%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +L +G ++H   +  G   D  +   L++MY     V++  +VF +   +    W  I  
Sbjct: 89  SLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFR 148

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS----GLKCMSQTKEIHGYIIRK 391
             A  +     L L+  +   G+ ++      VL AC      +  + + KEIH +I+R 
Sbjct: 149 ALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRH 208

Query: 392 GLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           G    V ++  ++DVY + G + Y+ +VF ++  K++VSW++MI+ Y  N +  +ALELF
Sbjct: 209 GYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELF 268

Query: 451 YLM--NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
            +M     +   + IT+VS L A +SL+ L+ GK ++ +++R+G +    V ++L+ MY 
Sbjct: 269 QIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYG 328

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           RCG +    +VF+ ++ +D+I W S+I+  G+HG GK AI +F  M     +P +ITF+ 
Sbjct: 329 RCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFIT 388

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L ACSH+GL+ E K   E M   Y++ P  EHYAC+VD+LGRAN L+EA + +++M  +
Sbjct: 389 VLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFK 448

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
           P   VW +LLG+CR+H N EL E  +  L EL+P N GNYVL+S+++A SR W DV +VR
Sbjct: 449 PGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVR 508

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
            ++   GL+K P  SWIE+  KI+S ++ ++ + + +E+   L  +  +++ + GYV QT
Sbjct: 509 KQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQ-GYVPQT 567

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
             V ++++EEEK +++ GHS +LA+A+G++ +++G +IRI+ NLR+C DCH+F K VS+ 
Sbjct: 568 NVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKF 627

Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
             RE+++RD NRFH F+ GVCSCGDYW
Sbjct: 628 TNREILLRDVNRFHCFKDGVCSCGDYW 654



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 213/431 (49%), Gaps = 21/431 (4%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  +I +C     L  G  +H  ++  G D   ++   L+ MY        A ++FD  
Sbjct: 76  TFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDET 135

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL- 178
            EK  + +WN+I  A + + +  + L L+ +M  +G+ +N +T+   L+AC  S      
Sbjct: 136 REK-TIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICP 194

Query: 179 ---GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G EIHA  ++ G    V+V   L+ +YAR G ++ A+ V   + +K+ VSW++M+  
Sbjct: 195 LRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIAC 254

Query: 236 FVQNDLYCKAMQFFR--ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           + +N++  KA++ F+   L+     P+ +  V+ + A   L  L +GK +HAY +++G  
Sbjct: 255 YAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLD 314

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S L + NTL+ MY +C  ++   RVF  M  +D ISW ++I+ Y  +    KA+++F  +
Sbjct: 315 STLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENM 374

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTK-----EIHGYIIRKGLSDLVILNAIVDVYGK 408
              G+    +   +VL ACS    + + K      ++ Y I   +        +VD+ G+
Sbjct: 375 INRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYA---CMVDILGR 431

Query: 409 CGNIDYSRNVFESIESKD-VVSWTSMISS---YVHNGLANEALELFYLMNEANVESDSIT 464
              +D +  + ++++ K     W S++ S   + +  LA  A  + + +   N  + +  
Sbjct: 432 ANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKN--AGNYV 489

Query: 465 LVSALSAASSL 475
           L+S + A S +
Sbjct: 490 LLSHIYAKSRM 500



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 168/325 (51%), Gaps = 19/325 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAY--VSNGEPLRVLETYSRMRVLGISVDA 58
           MY   GSV  A ++FD+  ++T+F WNA+  A    S GE L VL  Y +M  +GI  + 
Sbjct: 118 MYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVL--YGQMNWIGIPSNR 175

Query: 59  FTFPCVIKACAM----LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
           FT+  V+KAC +    +  L  G +IH  +L+ GY+    ++ +L+ +YA+      A  
Sbjct: 176 FTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASS 235

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACED 172
           +F  M +K ++V W+++I+ Y+ +   ++AL LF+ M  +    V N  T V+ LQAC  
Sbjct: 236 VFGAMPDK-NIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACAS 294

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
            +    G  +HA  ++ G +  + V N LI MY RCG+++    V   ++ +D +SWNS+
Sbjct: 295 LAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSL 354

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           ++ +  + L  KA+Q F  +   G  P  +  +  + A    G +   K L    + +  
Sbjct: 355 ISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYR 414

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGR 317
           +      +  M+ YA  C V+ +GR
Sbjct: 415 I------HPRMEHYA--CMVDILGR 431


>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
          Length = 641

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/620 (37%), Positives = 369/620 (59%), Gaps = 9/620 (1%)

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K  +  WN+++ + S   Q  E L  F  M R     + +T   AL+AC +      G  
Sbjct: 3   KRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEM 62

Query: 182 IHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           IH    K    G +L  YV ++LI MY +CG+M EA  +  +LE  D V+W+SM++GF +
Sbjct: 63  IHGFVKKDVTLGSDL--YVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120

Query: 239 NDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           N    +A++FFR +  A    PD+V  +  VSA  +L N   G+ +H + I++GF +DL 
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N+L++ YAK         +F  +  +D ISW+T+IA Y QN    +AL +F  +  +G
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 240

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
            + +V  +  VL AC+    + Q ++ H   IRKGL +++ +  A+VD+Y KC + + + 
Sbjct: 241 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN-EANVESDSITLVSALSAASSL 475
            VF  I  KDVVSW ++IS +  NG+A+ ++E F +M  E N   D+I +V  L + S L
Sbjct: 301 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL 360

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             L++ K  + ++I+ GF+    + +SLV++Y+RCG+L  A+KVFN +  KD ++WTS+I
Sbjct: 361 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLI 420

Query: 536 NANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
              G+HG+G  A++ F  M ++    P+ +TFL++L ACSH+GLI+EG +  ++M  DY+
Sbjct: 421 TGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYR 480

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           L P  EHYA LVDLLGR   L+ A +  + M   PT ++   LLGACR+H N E+ E VA
Sbjct: 481 LAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVA 540

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           KKL EL+  + G Y+L+SNV+    +W++VE++R  ++  G+KK    S IEI  K+H F
Sbjct: 541 KKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRF 600

Query: 715 IARDKSHSESDEIYKKLAEI 734
           +A D+ H E + +Y  L E+
Sbjct: 601 VADDELHPEKEPVYGLLKEL 620



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 268/510 (52%), Gaps = 11/510 (2%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCG 77
           +++R+++ WN +L +     +   VL  +S M       D FT P  +KAC  L++++ G
Sbjct: 1   MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60

Query: 78  AKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
             IHG V K     +D  V +SL+ MY KC    +A ++FD + EK D+V W+S++S + 
Sbjct: 61  EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL-EKPDIVTWSSMVSGFE 119

Query: 137 ASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
            +G   +A+  FR M     VT +  T +  + AC   S   LG  +H   ++ G +  +
Sbjct: 120 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 179

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
            + N+L+  YA+     EA  +   +  KD +SW++++  +VQN    +A+  F ++   
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 239

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           G +P+    +  + A     +L  G++ H  AI++G  +++++   L+DMY KC      
Sbjct: 240 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 299

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSG 374
             VF ++  +D +SW  +I+G+  N    +++E F  + LE     D +++  VL +CS 
Sbjct: 300 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 359

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L  + Q K  H Y+I+ G  S+  I  ++V++Y +CG++  +  VF  I  KD V WTS+
Sbjct: 360 LGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 419

Query: 434 ISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII--- 489
           I+ Y  +G   +ALE F +++  + V+ + +T +S LSA S   ++ +G  +   ++   
Sbjct: 420 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDY 479

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKV 519
           R   NLE      LVD+  R G LD A ++
Sbjct: 480 RLAPNLEHYAV--LVDLLGRVGDLDTAIEI 507



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 223/423 (52%), Gaps = 16/423 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           MY KCG +++A ++FD++ +  + TW++M+  +  NG P + +E + RM +   ++ D  
Sbjct: 86  MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 145

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++ AC  L +   G  +HG V++ G+ +   +VNSL+  YAK   F++A  LF  +
Sbjct: 146 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 205

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK DV+ W+++I+ Y  +G   EAL +F +M   G   N  T +  LQAC  +     G
Sbjct: 206 AEK-DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG 264

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            + H   ++ G   +V V+ AL+ MY +C    EA  V  ++  KD VSW ++++GF  N
Sbjct: 265 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 324

Query: 240 DLYCKAMQFFR-ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            +  ++++ F   L     +PD +  V  + +   LG L   K  H+Y IK GF S+  I
Sbjct: 325 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 384

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEG 357
           G +L+++Y++C  +    +VF  +  +D + WT++I GY  +    KALE F   V+   
Sbjct: 385 GASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE 444

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
           +  + +   S+L ACS       GL+       ++ Y +   L    +L   VD+ G+ G
Sbjct: 445 VKPNEVTFLSILSACSHAGLIHEGLRIFKLM--VNDYRLAPNLEHYAVL---VDLLGRVG 499

Query: 411 NID 413
           ++D
Sbjct: 500 DLD 502


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/741 (31%), Positives = 408/741 (55%), Gaps = 5/741 (0%)

Query: 6    GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
            G + DA  L  ++   +   WNA++ +Y  +G    V   Y  M+  G+     TF  ++
Sbjct: 272  GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASIL 331

Query: 66   KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
             A A +   D G +IH   +K G D+  F+ +SL+ +Y K      A+++FD   EK ++
Sbjct: 332  SAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEK-NI 390

Query: 126  VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
            V+WN+I+  +  +    E + +F+ M+R  L  + +TFV+ L AC +     LG ++H  
Sbjct: 391  VMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCI 450

Query: 186  TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
            T+K+G +  ++VANA++ MY++ G +  A  +   +  KDSVSWN+++ G   N+   +A
Sbjct: 451  TIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEA 510

Query: 246  MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
            +   + ++  G   D+V    A++A   +  +  GK++H+ +IK    S+  +G++L+D+
Sbjct: 511  INMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDL 570

Query: 306  YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
            Y+K   V    +V   + A   +    +I G  QNN   +A+ELF+ V  +G        
Sbjct: 571  YSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTF 630

Query: 366  GSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFESI- 422
             S+L  C+        K++H Y ++  +   D  +  ++V +Y KC  ++ +  + E + 
Sbjct: 631  TSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVP 690

Query: 423  ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
            + K++V WT+ IS Y  NG + ++L +F+ M   +V SD  T  S L A S ++ L  GK
Sbjct: 691  DHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGK 750

Query: 483  ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL-WTSMINANGLH 541
            E++G I++ GF    +  S+L+DMY++CG +  + ++F  ++ +  I+ W SMI     +
Sbjct: 751  EIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKN 810

Query: 542  GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
            G    A+ LF KM+     PD +T L +L ACSH+GLI+EG  F + M   Y + P  +H
Sbjct: 811  GYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDH 870

Query: 602  YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
            YACL+DLLGR  HL++A + +  +       +W   L AC++H ++E G++ AKKL+E++
Sbjct: 871  YACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEME 930

Query: 662  PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
            P +   YV +S++ AA+  W + +  R  MR  G+ K PG SWI +GNK   F+ +D  H
Sbjct: 931  PQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHH 990

Query: 722  SESDEIYKKLAEITEKLEREG 742
             ++  IYK L ++T  + ++G
Sbjct: 991  PDALSIYKMLDDLTGMMNKDG 1011



 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 175/605 (28%), Positives = 321/605 (53%), Gaps = 26/605 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G + DA+++FD  +++ +  WNA+L  +V N      ++ +  MR   +  D FT
Sbjct: 368 LYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFT 427

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC  L  LD G ++H + +K G D+  F+ N+++ MY+K      A+ LF  + 
Sbjct: 428 FVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIP 487

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V WN++I   + + +  EA+ + + M+  G+  +  +F  A+ AC +      G 
Sbjct: 488 VK-DSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGK 546

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH+A++K        V ++LI +Y++ G +  +  VL  ++    V  N+++TG VQN+
Sbjct: 547 QIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNN 606

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS-DLQIG 299
              +A++ F+++   G KP      + +S   R  + + GK++H Y +K   ++ D  +G
Sbjct: 607 REDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLG 666

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            +L+ +Y KC  +    ++  ++   ++ + WT  I+GYAQN   +++L +F  ++   +
Sbjct: 667 ISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDV 726

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRN 417
            +D     SVL ACS +  ++  KEIHG I++ G +S     +A++D+Y KCG++  S  
Sbjct: 727 RSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFE 786

Query: 418 VFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           +F+ ++++ +++ W SMI  +  NG ANEAL LF  M E+ ++ D +TL+  L A S   
Sbjct: 787 IFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAG 846

Query: 477 ILKKG-------KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DL 528
           ++ +G        ++ G + R          + L+D+  R G L  A +V + +  + D 
Sbjct: 847 LISEGLHFFDSMSQVYGIVPRVDHY------ACLIDLLGRGGHLQKAQEVIDQLPFRADG 900

Query: 529 ILWTSMINANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           ++W + + A  +H    RGKVA     +ME +S +     FL+ L+A   +G   E K  
Sbjct: 901 VIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSST--YVFLSSLHAA--AGNWVEAKVA 956

Query: 586 LEIMR 590
            E MR
Sbjct: 957 REAMR 961



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/588 (28%), Positives = 298/588 (50%), Gaps = 39/588 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V DA ++FD ++      W +M+  Y   G   + L  +SRM  +G   D  T
Sbjct: 201 MYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVT 260

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             CV                              I+++L +M  +  D   AR L  R+ 
Sbjct: 261 --CVT-----------------------------IISTLASM-GRLGD---ARTLLKRI- 284

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
                V WN++I++YS SG   E  GL+++M++ GL+    TF + L A  + +    G 
Sbjct: 285 RMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGR 344

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  VK G +  V+V ++LI +Y + G +++A  V      K+ V WN++L GFVQN+
Sbjct: 345 QIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNE 404

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  + +Q F+ ++ A  + D    V+ + A   L +L  G+++H   IK G  +DL + N
Sbjct: 405 LQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVAN 464

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++DMY+K   ++    +F  +  +D +SW  +I G A N    +A+ + + ++  G+  
Sbjct: 465 AMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIAL 524

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D +   + + ACS +  +   K+IH   I+  + S+  + ++++D+Y K G+++ SR V 
Sbjct: 525 DEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVL 584

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +++  +V   ++I+  V N   +EA+ELF  + +   +  + T  S LS  +      
Sbjct: 585 AHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSV 644

Query: 480 KGKELNGFIIRKG-FNLEGSVASSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMINA 537
            GK+++ + ++    N + S+  SLV +Y +C  L+ ANK+   V   K+L+ WT+ I+ 
Sbjct: 645 IGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISG 704

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
              +G    ++ +F++M +     D  TF ++L ACS    + +GK+ 
Sbjct: 705 YAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEI 752



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 283/548 (51%), Gaps = 38/548 (6%)

Query: 29  MLGAYVSNGEPLRVLETYSRMRV-LGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKC 87
           +L  +  +G P  VL+ + R+R  +G + D F    V+ AC+ L  L+ G ++H  VLK 
Sbjct: 127 VLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKS 186

Query: 88  GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGL 147
           G+ S+ F    LV MYAKC +   AR++FD +    D + W S+I+ Y   G+  +AL L
Sbjct: 187 GFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIA-CPDTICWTSMIAGYHRVGRYQQALAL 245

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           F  M+++G V +  T V                                    +I+  A 
Sbjct: 246 FSRMEKMGSVPDQVTCV-----------------------------------TIISTLAS 270

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
            G++ +A  +L ++    +V+WN+++  + Q+ L  +    +++++  G  P +    + 
Sbjct: 271 MGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASI 330

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           +SA+  +     G+++HA A+K G  +++ +G++L+++Y K  C++   +VF   T ++ 
Sbjct: 331 LSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNI 390

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           + W  I+ G+ QN    + +++F+ ++   L+AD     SVL AC  L  +   +++H  
Sbjct: 391 VMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCI 450

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            I+ G+ +DL + NA++D+Y K G ID ++ +F  I  KD VSW ++I    HN    EA
Sbjct: 451 TIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEA 510

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           + +   M    +  D ++  +A++A S++  ++ GK+++   I+       +V SSL+D+
Sbjct: 511 INMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDL 570

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y++ G ++ + KV   V    ++   ++I     + R   AI+LF ++  + F P + TF
Sbjct: 571 YSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTF 630

Query: 567 LALLYACS 574
            ++L  C+
Sbjct: 631 TSILSGCT 638



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 142/614 (23%), Positives = 285/614 (46%), Gaps = 46/614 (7%)

Query: 76  CGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA-RQLFDRMGEKEDVVLWNSIISA 134
           CG  +H  +L+ G      + ++LV +Y +      A R L    G        +S++S 
Sbjct: 72  CGV-LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSC 130

Query: 135 YSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
           ++ SG   + L  F+ ++  +G   + +     L AC        G ++H   +KSG   
Sbjct: 131 HARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCS 190

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            V+    L+ MYA+CG++ +A  +   +   D++ W SM+ G+ +   Y +A+  F  ++
Sbjct: 191 SVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRME 250

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
             G  PDQV  V  +S    +G L + + L                              
Sbjct: 251 KMGSVPDQVTCVTIISTLASMGRLGDARTL------------------------------ 280

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
            + R+  +MT+   ++W  +IA Y+Q+    +   L++ ++ +GL        S+L A +
Sbjct: 281 -LKRI--RMTST--VAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAA 335

Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            +    + ++IH   ++ GL +++ + ++++++Y K G I  ++ VF+    K++V W +
Sbjct: 336 NMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNA 395

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           ++  +V N L  E +++F  M  A++E+D  T VS L A  +L  L  G++++   I+ G
Sbjct: 396 ILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNG 455

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
            + +  VA++++DMY++ GA+D+A  +F+ +  KD + W ++I     +     AI++  
Sbjct: 456 MDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLK 515

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY--ACLVDLLG 610
           +M+    A D ++F   + ACS+   I  GK   +I     + +    H   + L+DL  
Sbjct: 516 RMKFYGIALDEVSFATAINACSNIWAIETGK---QIHSASIKYNVCSNHAVGSSLIDLYS 572

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVL 670
           +   +E + + +  +       +   + G   V +N+E   I   + +  D   P N+  
Sbjct: 573 KFGDVESSRKVLAHVDASSIVPINALITGL--VQNNREDEAIELFQQVLKDGFKPSNFTF 630

Query: 671 ISNVFAASRKWKDV 684
            S +   +R    V
Sbjct: 631 TSILSGCTRPVSSV 644


>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
 gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
          Length = 969

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/682 (34%), Positives = 390/682 (57%), Gaps = 12/682 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A Q F ++ +R V +W  M+GAY  +G+    L+ +  M + G + ++ T
Sbjct: 259 MYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVT 318

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++  C     L+ G +IH LV++   +S   + NSL+ MY++C  +  +R LFDRM 
Sbjct: 319 FVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMS 378

Query: 121 EKEDVVLWNSIISAYS-ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            + D V W++II A S     C +AL L+R M   G++         L+AC   +    G
Sbjct: 379 VR-DSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGG 437

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +HA  ++SG    + V  +L+ MYA+CG + EA  V  ++ N+  + WNSM+T + + 
Sbjct: 438 KLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQEK 496

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           D + +A+  FRE+Q  G  PD++  +  ++A     +L NG+ +H   +  GF +D+++ 
Sbjct: 497 DPH-EALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVA 555

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L +MYAKC  +     VF  M  +D +SW  +IA Y Q      A+ L   +QLEG+ 
Sbjct: 556 TALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMR 615

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D     S+L ACS    +   ++IH +I    L +D+V++  ++ +Y  CG+++ +R +
Sbjct: 616 PDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREI 675

Query: 419 FESIES------KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           F++I S      +D+  WTSMI++Y  +G   +ALEL+  M+   VE+D +T +S L+A 
Sbjct: 676 FDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNAC 735

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           + LS L++G+ ++  ++R+G   + +VA+S+V MY +CG+ D A+ VF   + KD+ LWT
Sbjct: 736 AHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWT 795

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           ++I +   HG G+ A+ +F ++  +     ++TF+A+L ACSH GLI EG +F   M  +
Sbjct: 796 ALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASM-AE 854

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
             ++P  EH++CLVDLL RA HL  A +F+  M +     V  ALL ACRVH + E    
Sbjct: 855 LGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVHGDVERARR 914

Query: 653 VAKKLLELDPGNPGNYVLISNV 674
           VA+KL  LDP +   YV +SN+
Sbjct: 915 VAEKLEALDPESEAPYVTLSNI 936



 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 194/590 (32%), Positives = 326/590 (55%), Gaps = 8/590 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A Q F ++ +R V +W  M+GAY  +G+    L+ +  M + G + ++ T
Sbjct: 54  MYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVT 113

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR-QLFDRM 119
           F  ++  C     L+ G +IH LV++   +S   + NSL+ MY++C  +  +R Q F RM
Sbjct: 114 FVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARM 173

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            ++ DVV W  +I AYS  G+   ++ LFREM   G   N+ TFV+ L  CE  S    G
Sbjct: 174 -KRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQG 232

Query: 180 MEIHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            +IHA  V+S    +L + V N  I MY +CG +  A     +++ +D VSW  M+  + 
Sbjct: 233 RQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYS 292

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q+  +  ++Q FRE+   G  P+ V  V+ +S       L  G+++HA  ++    S + 
Sbjct: 293 QDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVV 352

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-ALELFRTVQLE 356
           + N+L+ MY++C        +F +M+ +D +SW+TII   ++ + H + AL L+R++  E
Sbjct: 353 VANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHE 412

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
           G+    + +  VL AC  L  +   K +H ++I  GL   ++  ++V++Y KCG +  +R
Sbjct: 413 GVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGISLVNMYAKCGTVGEAR 472

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF+ I ++  + W SMI++Y      +EAL LF  M    V  D IT ++ L+A  + +
Sbjct: 473 KVFDRINNRSRILWNSMITAYQEKD-PHEALHLFREMQPEGVSPDRITFMTVLNACVNAA 531

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L+ G+ ++  I+  GF  +  VA++L +MYA+CG+L  A  VF+ +  +D++ W +MI 
Sbjct: 532 DLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIA 591

Query: 537 ANGLHGR-GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           A  + GR G+ AI L + M+ E   PD  TF +LL ACS    + +G++ 
Sbjct: 592 AY-VQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQI 640



 Score =  285 bits (730), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 176/537 (32%), Positives = 282/537 (52%), Gaps = 10/537 (1%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           GI  D      ++ AC  L  L+ G  I   +     +    + N  + MY KC     A
Sbjct: 5   GIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGA 64

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
            Q F RM ++ DVV W  +I AYS  G+   +L LFREM   G   N+ TFV+ L  CE 
Sbjct: 65  VQTFARM-KRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEA 123

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEA-AGVLYQLENKDSVSWNS 231
            S    G +IHA  V+S     V VAN+L+ MY+RC    ++      +++ +D VSW  
Sbjct: 124 PSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTV 183

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M+  + Q+  +  ++Q FRE+   G  P+ V  V+ +S       L  G+++HA  ++  
Sbjct: 184 MIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESS 243

Query: 292 FVSDLQIG--NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
             S L IG  N  ++MY KC C++   + F +M  +D +SWT +I  Y+Q+     +L+L
Sbjct: 244 LESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQL 303

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGK 408
           FR + LEG   + +   S+L  C     + Q ++IH  ++   L S +V+ N+++ +Y +
Sbjct: 304 FREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSR 363

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMI-SSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           C + + SR++F+ +  +D VSW+++I +    +    +AL L+  M    V   ++ L  
Sbjct: 364 CRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSM 423

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGS-VASSLVDMYARCGALDIANKVFNCVQTK 526
            L A  SL+ LK GK ++  +I  G  LEG  V  SLV+MYA+CG +  A KVF+ +  +
Sbjct: 424 VLEACGSLAELKGGKLVHAHVIESG--LEGDLVGISLVNMYAKCGTVGEARKVFDRINNR 481

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
             ILW SMI A       + A+ LF +M+ E  +PD ITF+ +L AC ++  +  G+
Sbjct: 482 SRILWNSMITAYQEKDPHE-ALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGR 537



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 218/440 (49%), Gaps = 9/440 (2%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M R G+  +       L AC        G  I      +   L + V N  I MY +CG 
Sbjct: 1   MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           +  A     +++ +D VSW  M+  + Q+  +  ++Q FRE+   G  P+ V  V+ +S 
Sbjct: 61  LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC-CCVNYMGRVFYQMTAQDFIS 329
                 L  G+++HA  ++    S + + N+L+ MY++C    +   + F +M  +D +S
Sbjct: 121 CEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVS 180

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           WT +I  Y+Q+     +++LFR + LEG   + +   S+L  C     + Q ++IH  ++
Sbjct: 181 WTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVV 240

Query: 390 RKGLS---DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
              L    D+ +LN  +++Y KCG +D +   F  ++ +DVVSWT MI +Y  +G  + +
Sbjct: 241 ESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLS 300

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L+LF  M       +S+T VS LS   + S+L++G++++  ++         VA+SL+ M
Sbjct: 301 LQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGM 360

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINA---NGLHGRGKVAIDLFYKMEAESFAPDH 563
           Y+RC + + +  +F+ +  +D + W+++I A      H R   A+ L+  M  E   P  
Sbjct: 361 YSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRD--ALPLYRSMLHEGVMPKT 418

Query: 564 ITFLALLYACSHSGLINEGK 583
           +    +L AC     +  GK
Sbjct: 419 LALSMVLEACGSLAELKGGK 438



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 130/231 (56%), Gaps = 2/231 (0%)

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYS 415
           G+  D ++I ++L AC+ L  + + K I   +    L  D+ + N  +++Y KCG +D +
Sbjct: 5   GIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGA 64

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
              F  ++ +DVVSWT MI +Y  +G  + +L+LF  M       +S+T VS LS   + 
Sbjct: 65  VQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAP 124

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDLILWTSM 534
           S+L++G++++  ++         VA+SL+ MY+RC +  D   + F  ++ +D++ WT M
Sbjct: 125 SLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVM 184

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           I A    G+  ++I LF +M  E  AP+ +TF+++L  C    L+ +G++ 
Sbjct: 185 IGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQI 235



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 73/133 (54%)

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M+   +  D + + + L+A + L  L++GK +   +      L+  V +  ++MY +CG 
Sbjct: 1   MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           LD A + F  ++ +D++ WT MI A    G+  +++ LF +M  E  AP+ +TF+++L  
Sbjct: 61  LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120

Query: 573 CSHSGLINEGKKF 585
           C    L+ +G++ 
Sbjct: 121 CEAPSLLEQGRQI 133


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/753 (33%), Positives = 403/753 (53%), Gaps = 12/753 (1%)

Query: 1   MYGKCGSVLDAEQLFDK-------VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG 53
           MY KCG +  A Q+FD        VS R V  WN+M+  Y         +  + RM V G
Sbjct: 104 MYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG 163

Query: 54  ISVDAFTFPCVIKACAMLKDL--DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
           +  DAF+   V+       +   + G +IHG +L+   D+  F+  +L+ MY K      
Sbjct: 164 VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSID 223

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A ++F  + +K +VVLWN +I  +  SG C  +L L+   +   +   + +F  AL AC 
Sbjct: 224 AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            S     G +IH   VK G +   YV  +L++MY++CG + EA  V   + +K    WN+
Sbjct: 284 QSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA 343

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M+  + +ND    A+  F  ++     PD     N +S    LG    GK +HA   K+ 
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
             S   I + L+ +Y+KC C      VF  M  +D ++W ++I+G  +N    +AL++F 
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463

Query: 352 TVQLE--GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGK 408
            ++ +   L  D  I+ SV  AC+GL+ +    ++HG +I+ GL  ++ + ++++D+Y K
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSK 523

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           CG  + +  VF S+ ++++V+W SMIS Y  N L   +++LF LM    +  DS+++ S 
Sbjct: 524 CGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSV 583

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           L A SS + L KGK L+G+ +R G   +  + ++L+DMY +CG    A  +F  +Q K L
Sbjct: 584 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 643

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
           I W  MI   G HG    A+ LF +M+    +PD +TFL+L+ AC+HSG + EGK   E 
Sbjct: 644 ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF 703

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           M+ DY ++P  EHYA +VDLLGRA  LEEAY F+++M IE  + +W  LL A R H N E
Sbjct: 704 MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE 763

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
           LG + A+KLL ++P     YV + N++  +    +  ++   M+  GL K PG SWIE+ 
Sbjct: 764 LGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVS 823

Query: 709 NKIHSFIARDKSHSESDEIYKKLAEITEKLERE 741
           ++ + F +   S     EI+  L  +   +  E
Sbjct: 824 DRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 171/572 (29%), Positives = 299/572 (52%), Gaps = 17/572 (2%)

Query: 27  NAMLGAYVSNGEPLRVLETYSRMRVLGIS---VDAFTFPCVIKACAMLKDLDCGAKIHGL 83
           N+ + A +  GE L+ L  YS+    G S      FTFP ++KAC+ L +L  G  IHG 
Sbjct: 28  NSGIRALIQKGEYLQALHLYSKHD--GSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85

Query: 84  VLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------DVVLWNSIISAYSA 137
           V+  G+    FI  SLV MY KC     A Q+FD   + +      DV +WNS+I  Y  
Sbjct: 86  VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145

Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQA-CEDSSF-ETLGMEIHAATVKSGQNLQV 195
             +  E +G FR M   G+  +A++    +   C++ +F    G +IH   +++  +   
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTGFVQNDLYCKAMQFFRELQG 254
           ++  ALI MY + G   +A  V  ++E+K +V  WN M+ GF  + +   ++  +   + 
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
              K        A+ A  +  N   G+++H   +K G  +D  +  +L+ MY+KC  V  
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
              VF  +  +    W  ++A YA+N+    AL+LF  ++ + +  D   + +V+  CS 
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L   +  K +H  + ++ + S   I +A++ +Y KCG    +  VF+S+E KD+V+W S+
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSL 445

Query: 434 ISSYVHNGLANEALELFYLM--NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           IS    NG   EAL++F  M  ++ +++ DS  + S  +A + L  L+ G +++G +I+ 
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           G  L   V SSL+D+Y++CG  ++A KVF  + T++++ W SMI+    +   +++IDLF
Sbjct: 506 GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF 565

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGK 583
             M ++   PD ++  ++L A S +  + +GK
Sbjct: 566 NLMLSQGIFPDSVSITSVLVAISSTASLLKGK 597


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/674 (35%), Positives = 393/674 (58%), Gaps = 8/674 (1%)

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
           L  F+         +  T + +L  C  +S      +IH+  + +      ++ N L+ +
Sbjct: 14  LSFFKSHYHQTPFLHPLTSLNSLLNCSRTSKH--ATQIHSQLITTALLSLPFLFNNLLNL 71

Query: 205 YARCGKMTEAAGVLYQL--ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
           YA+CG + +   +      ++K+ VSW S++T   +     KA+ FF  ++ +G  P+  
Sbjct: 72  YAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHY 131

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
                +SA       ++G+++H+   K GF++++ + + L+DMYAKCC +    +VF +M
Sbjct: 132 TFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEM 191

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA-DVMIIGSVLMACSGLKCMSQT 381
             ++ +SW T+I G+ QN  + +A+  F+T+ LE L A D +   SV  AC+    +   
Sbjct: 192 PVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFG 251

Query: 382 KEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
           K++HG  ++ G+ +LV I N++ D+YGKCG  +    +F +  ++DVV+W  MI +YV+N
Sbjct: 252 KQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYN 311

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
               +A   F++M       D  +  S L + ++L+ L +G  ++  IIR GF     VA
Sbjct: 312 HNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVA 371

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           SSL+ MYA+CG+L  A ++F   + ++++ WT++I A   HG     ++LF +M  E   
Sbjct: 372 SSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIK 431

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
           PD+ITF+++L ACSH+G + EG  +   M   + + P  EHYAC+VDLL RA  L+ A +
Sbjct: 432 PDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKR 491

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
           F+  M I+P A VW ALL ACR HSN  +G+ VA KL +L+P NPGNYVL+ N+   +  
Sbjct: 492 FIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGM 551

Query: 681 WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLER 740
             + ++VR +M   G++K PG SWI+I N  + F   DKSH ++ EIY ++ E  ++L +
Sbjct: 552 LNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIY-EMLEKLKELVK 610

Query: 741 EGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHS 800
           + GYVA+T+F + N  EE K Q L+ HSE++A+A+G+L    G+ IRI KNLR C DCH+
Sbjct: 611 KKGYVAETEFAI-NTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHT 669

Query: 801 FCKLVSRLFGRELV 814
             K  S +F RE++
Sbjct: 670 VMKFASEIFAREII 683



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 164/516 (31%), Positives = 269/516 (52%), Gaps = 16/516 (3%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG-EKEDVVLWNSIISAY 135
             +IH  ++     S  F+ N+L+ +YAKC    +   LF     + ++VV W S+I+  
Sbjct: 46  ATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQL 105

Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
           +   +  +AL  F  M+R G+  N YTF A L AC D++    G ++H+   K G   +V
Sbjct: 106 TRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEV 165

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           +V +AL+ MYA+C  M  A  V  ++  ++ VSWN+M+ GF+QN LY +A+ FF+ L   
Sbjct: 166 FVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLE 225

Query: 256 GQKP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
                D+V   +  SA    GNL  GK++H  A+K G  + + I N+L DMY KC   N 
Sbjct: 226 NLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFND 285

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
           + ++F    A+D ++W  +I  Y  N+ +  A   F  ++ +G   D     SVL +C+ 
Sbjct: 286 VAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCAN 345

Query: 375 LKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L  + Q   IH  IIR G + +L + ++++ +Y KCG++  +  +FE  E ++VV WT++
Sbjct: 346 LAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAI 405

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKG 492
           I++   +G AN  +ELF  M    ++ D IT VS LSA S    +++G    N  I   G
Sbjct: 406 IAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHG 465

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GK-VA 547
                   + +VD+ +R G LD A +    +  K D  +W ++++A   H     GK VA
Sbjct: 466 IYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVA 525

Query: 548 IDLFYKMEAESFAPDHI-TFLALLYACSHSGLINEG 582
           + LF         PD+   ++ L    + +G++NE 
Sbjct: 526 LKLF------DLEPDNPGNYVLLCNILTRNGMLNEA 555



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 214/447 (47%), Gaps = 17/447 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQ--RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           +Y KCGSV     LF       + V +W +++        P + L  ++ MR  G+  + 
Sbjct: 71  LYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNH 130

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           +TF  V+ AC        G ++H LV K G+ +  F+V++LV MYAKC D   A ++F+ 
Sbjct: 131 YTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEE 190

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFET 177
           M  + ++V WN++I  +  +    +A+  F+ +    L   +  +F +   AC ++    
Sbjct: 191 MPVR-NLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLE 249

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G ++H   +K G    VY+ N+L  MY +CG   + A +      +D V+WN M+  +V
Sbjct: 250 FGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYV 309

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            N  Y  A   F  ++  G  PD+    + + +   L  L  G  +H   I+ GFV +L+
Sbjct: 310 YNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLR 369

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + ++L+ MYAKC  +    ++F +   ++ + WT IIA   Q+      +ELF  +  EG
Sbjct: 370 VASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREG 429

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
           +  D +   SVL ACS       G    +   ++HG  I  G         IVD+  + G
Sbjct: 430 IKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHG--IYPGHEHYA---CIVDLLSRAG 484

Query: 411 NIDYSRNVFESIESK-DVVSWTSMISS 436
            +D ++   E +  K D   W +++S+
Sbjct: 485 ELDRAKRFIELMPIKPDASVWGALLSA 511


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/769 (31%), Positives = 438/769 (56%), Gaps = 18/769 (2%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
            +D+ TF  ++K+C   +    G  +H  +++   +    + NSL+++Y+K  D  KA+ 
Sbjct: 59  PMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKD 118

Query: 115 LFDRMGE--KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           +F+ MG   K DVV W+++++ +  +G+  +A+ LF E   +GLV N Y + A ++AC +
Sbjct: 119 VFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSN 178

Query: 173 SSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAA-GVLYQLENKDSVSWN 230
           S F  +G  I    +K+G     V V  +LI M+ +     E A  V  ++   + V+W 
Sbjct: 179 SDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
            M+T  +Q     +A++FF ++  +G + D+    +  SA   L NL  G++LH++AI+ 
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRS 298

Query: 291 GFVSDLQIGNTLMDMYAKCCC---VNYMGRVFYQMTAQDFISWTTIIAGYAQN-NCHLKA 346
           G   D++   +L+DMYAKC     V+   +VF +M     +SWT +I GY QN N   +A
Sbjct: 299 GLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEA 356

Query: 347 LELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVD- 404
           + LF  +  +G ++ +     S   AC  +      K++ G+  ++GL+    ++  V  
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVIS 416

Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
           ++ KC  ++ +R  FES+  K++VS+ + +     N     A EL   + E  +   + T
Sbjct: 417 MFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFT 476

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
             S LS  +++  L+KG++++  +++ G +    V ++L+ MY++CG++D A++VF+ + 
Sbjct: 477 FASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMD 536

Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
            +++I WTSMI     HG  +  ++ F +M  E   P+ +T++A+L ACSH GL++EG +
Sbjct: 537 NRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWR 596

Query: 585 FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
               M  D+++ P  EHYAC+VDLL RA  L +A++F+ +M  +    VW   LGACRVH
Sbjct: 597 HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656

Query: 645 SNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSW 704
           SN ELG++ A+K+LE DP  P  Y+ +SN++A++ KW++  ++R +M+   L K  G SW
Sbjct: 657 SNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSW 716

Query: 705 IEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV----EEEEK 760
           IE+G+K+H F   D SH  + +IY +L  +  +++R  GYV  T  VLH +    +E +K
Sbjct: 717 IEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKR-CGYVPDTDLVLHKLEEEDDEAKK 775

Query: 761 VQMLYGHSERLAIAYGVLKSTEG-SLIRITKNLRVCVDCHSFCKLVSRL 808
             +LY HSE++A+A+G++ + +   +I+ +  + V +    F  + SR+
Sbjct: 776 EMLLYQHSEKIAVAFGLISTAKSRPMIQTSFWIFVLLAISGFSIMESRI 824



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 291/563 (51%), Gaps = 19/563 (3%)

Query: 1   MYGKCGSVLDAEQLFD---KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
           +Y K G +  A+ +F+   +  +R V +W+AM+  + +NG     ++ +     +G+  +
Sbjct: 106 LYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPN 165

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN-SLVAMYAKCYD-FRKARQL 115
            + +  VI+AC+    +  G  I G ++K G+  +D  V  SL+ M+ K  + F  A ++
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD+M E  +VV W  +I+     G   EA+  F +M   G  ++ +T  +   AC +   
Sbjct: 226 FDKMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARC---GKMTEAAGVLYQLENKDSVSWNSM 232
            +LG ++H+  ++SG  L   V  +L+ MYA+C   G + +   V  ++++   +SW ++
Sbjct: 285 LSLGRQLHSWAIRSG--LADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTAL 342

Query: 233 LTGFVQN-DLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           +TG++QN +L  +A+  F E+   G  +P+     +A  A G + +   GK++  +A K+
Sbjct: 343 ITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKR 402

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G  S+  + N+++ M+ KC  +      F  ++ ++ +S+ T + G  +N     A EL 
Sbjct: 403 GLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELL 462

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
             +    L        S+L   + +  + + ++IH  +++ GLS +  + NA++ +Y KC
Sbjct: 463 SEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKC 522

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G+ID +  VF  +++++V+SWTSMI+ +  +G A   LE F  M +  V+ + +T V+ L
Sbjct: 523 GSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAIL 582

Query: 470 SAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-D 527
           SA S + ++ +G +  N          +    + +VD+  R G L  A +  N +  + D
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642

Query: 528 LILWTSMINANGLHGR---GKVA 547
           +++W + + A  +H     GK+A
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLA 665


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/618 (35%), Positives = 363/618 (58%), Gaps = 10/618 (1%)

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           N  S  WN+ L    +   + +A+  + ++   G +P+      A+ +   L   + G +
Sbjct: 11  NALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQ 70

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ--MTAQDFISWTTIIAGYAQN 340
            H    K G V +  +   L+ MY K   V+   +VF +   + +  + +  +++GY  N
Sbjct: 71  FHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSN 130

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
           +   +A+ LFR +  EG+  + + +  ++ AC     +     +H   ++ G  SD+ ++
Sbjct: 131 SKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVV 190

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N  + +Y KCG+++Y++ +F+ +  K ++SW +M+S Y  NGLA   LEL+  M+   V 
Sbjct: 191 NCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVH 250

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            D +TLV  LS+ ++L     G E+   I   GF     + ++L++MYARCG L  A  V
Sbjct: 251 PDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAV 310

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F+ +  + L+ WT++I   G+HG G++A+ LF +M      PD   F+ +L ACSH+GL 
Sbjct: 311 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLT 370

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
           ++G ++ ++M+ +YQL+P PEHY+C+VDLLGRA  L+EA   + SM I+P   VW ALLG
Sbjct: 371 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 430

Query: 640 ACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           AC++H N EL E+  ++++EL+P N G YVL+SN+++ +   K V ++R+ M+   LKK 
Sbjct: 431 ACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKD 490

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG S++E+  ++H FI  D++H +SDEIY+ L E+   + +E G   +      N EE  
Sbjct: 491 PGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD-----NREESN 545

Query: 760 K--VQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           K     +  HSE+LA+A+G+L +T G+ + I KNLR+C DCH F K+VS++  R+L VRD
Sbjct: 546 KDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRD 605

Query: 818 ANRFHHFEAGVCSCGDYW 835
           A RFHHF  G CSC DYW
Sbjct: 606 ATRFHHFRNGSCSCKDYW 623



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 203/419 (48%), Gaps = 10/419 (2%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
            WN  L       + L+ L  Y +M   G   +AFTFP  +K+CA L     G++ HG +
Sbjct: 16  PWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQI 75

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR-MGEKEDVVLWNSIISAYSASGQCLE 143
            K G     F+   L++MY K      AR++F+     ++  V +N+++S Y ++ +C E
Sbjct: 76  TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
           A+ LFR+M   G+  N+ T +  + AC       LG  +H +T+K G +  V V N  I 
Sbjct: 136 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 195

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           MY +CG +  A  +  ++  K  +SWN+M++G+ QN L    ++ +R +   G  PD V 
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 255

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
            V  +S+   LG    G E+       GF S+  + N L++MYA+C  +     VF  M 
Sbjct: 256 LVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 315

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
            +  +SWT II GY  +     A++LF+ +   G++ D      VL ACS      Q  E
Sbjct: 316 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 375

Query: 384 I-----HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
                   Y +  G       + +VD+ G+ G +  ++ + ES+  K D   W +++ +
Sbjct: 376 YFKMMKRNYQLEPGPEH---YSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 431



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 182/366 (49%), Gaps = 11/366 (3%)

Query: 1   MYGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY K   V +A ++F++   S++    +NA++  YVSN +    +  + +M   G+ V++
Sbjct: 93  MYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNS 152

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            T   +I AC    +L+ G+ +H   LK G+DS   +VN  + MY KC     A++LFD 
Sbjct: 153 VTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDE 212

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K  ++ WN+++S Y+ +G     L L+R M   G+  +  T V  L +C +   +++
Sbjct: 213 MPVK-GLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSV 271

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G E+      SG     ++ NALI MYARCG +T+A  V   +  +  VSW +++ G+  
Sbjct: 272 GHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGM 331

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A+Q F+E+  +G +PD    V  +SA    G    G E +   +K+ +   L+ 
Sbjct: 332 HGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE-YFKMMKRNY--QLEP 388

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G    + Y+  C V+ +GR      AQ  I    I    A     L A ++ + V+L  L
Sbjct: 389 GP---EHYS--CMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAEL 443

Query: 359 DADVMI 364
             + +I
Sbjct: 444 AFERVI 449


>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
          Length = 773

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/722 (34%), Positives = 397/722 (54%), Gaps = 19/722 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G    A   F    +   F WN+++  +    + +  L  + RM   G     FT 
Sbjct: 55  YSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASDFVAALSAHRRMLASGARPSPFTA 114

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD----FIVNSLVAMYAKCYDFRKARQLFD 117
           P    A A L  L  GA +H   ++ G    D     + +SLV MYA+C + R A ++F+
Sbjct: 115 PLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFE 174

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG----LVTNAYTFVAALQACEDS 173
            M E+ DVV W ++IS    +G+  E L    EM R+     +  N+ T  + L+AC   
Sbjct: 175 EMPER-DVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVL 233

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                G  +H   VK G      V +AL +MY++C    +A  +  +L  KD VSW S++
Sbjct: 234 DELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLI 293

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
             + +  L  +AM+ F+++  +G +PD++     +S  G  GN+  GK  HA   K+ F 
Sbjct: 294 GIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFG 353

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
             + IGN L+ MY K   V+  GRVF  +  +D  SW  ++ GY +  C +K LEL+R +
Sbjct: 354 DSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREM 413

Query: 354 QLEG-----LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYG 407
           QL         AD ++  S + +CS L  +   +  H Y I+  L  D  + N ++ +YG
Sbjct: 414 QLRDKYEFWCVADSLV--SAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYG 471

Query: 408 KCGNIDYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
           +CG  D++  +F   + K DVV+W ++ISSY H G +N A+ L+  M    +  +S TL+
Sbjct: 472 RCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLI 531

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           + +SA ++L  L++G++++ ++   G++ + S+ ++L+DMYA+CG L IA ++F+ +   
Sbjct: 532 TVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQH 591

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           D++ W  MI+  G+HG  K A++LF KME  S  P+ +TFLA+L A  HSGL+ EG+K  
Sbjct: 592 DVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVF 651

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
             M   Y L+P  +HYAC+VDLLG++ HL+EA   V +M IEP   +W  LL AC++H N
Sbjct: 652 TRMG-KYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDN 710

Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            E+G  +AKK    DP N G Y+LISN +  ++KW ++E++R  M+  G++K  G S ++
Sbjct: 711 FEMGLRIAKKAFASDPENEGYYILISNSYGGAKKWDEIEKLRETMKNLGVQKGVGWSAVD 770

Query: 707 IG 708
            G
Sbjct: 771 YG 772



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 173/576 (30%), Positives = 303/576 (52%), Gaps = 23/576 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEP---LRVLETYSRMRVLG-ISV 56
           MY +CG+V DA ++F+++ +R V  W A++   V NGE    LR L    R+   G +  
Sbjct: 159 MYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRP 218

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           ++ T    ++AC +L +L+ G  +HG V+K G   +  ++++L +MY+KCY    A  LF
Sbjct: 219 NSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALF 278

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
             + EK DVV W S+I  Y   G   EA+ LF++M   GL  +       L    ++   
Sbjct: 279 LELPEK-DVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNV 337

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ-LENKDSVSWNSMLTG 235
             G   HA   K      V + NALI+MY +  +M ++AG +++ L  +D+ SWN M+ G
Sbjct: 338 HGGKTFHAVITKRNFGDSVLIGNALISMYGKF-EMVDSAGRVFRLLHQRDADSWNLMVVG 396

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCT----VNAVSASGRLGNLLNGKELHAYAIKQG 291
           + +     K ++ +RE+Q    K +  C     V+A+S+  RL  L  G+  H Y+IK  
Sbjct: 397 YCKAGCDVKCLELYREMQ-LRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHL 455

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVF-YQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
              D  + N L+ MY +C   ++  ++F       D ++W T+I+ YA       A+ L+
Sbjct: 456 LDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLY 515

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
             + +EGL  +   + +V+ AC+ L  + + ++IH Y+   G   D+ I  A++D+Y KC
Sbjct: 516 DQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKC 575

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G +  +R +F+S+   DVV+W  MIS Y  +G A +ALELF  M   +++ + +T ++ L
Sbjct: 576 GQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAIL 635

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQTK 526
           SA     +L++G+++  F     ++LE ++   + +VD+  + G L  A + V       
Sbjct: 636 SALCHSGLLEEGRKV--FTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEP 693

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           D  +W ++++A  LH       ++  ++  ++FA D
Sbjct: 694 DGGIWGTLLSACKLHDN----FEMGLRIAKKAFASD 725


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/684 (33%), Positives = 380/684 (55%), Gaps = 40/684 (5%)

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF----VQNDLYCKAM 246
            +  ++  NAL++  A    + +   +   +  +D+VS+N+++ GF              
Sbjct: 72  PDPNLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYR 131

Query: 247 QFFRE---LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
              RE   + GA  +P ++     V A+  LG+   G+++H   ++ GF +     + L+
Sbjct: 132 ALLREEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLV 191

Query: 304 DMYAKCCCVNYMGRVFYQMTAQ-------------------------------DFISWTT 332
           DMYAK   +    RVF +M  +                               D I+WTT
Sbjct: 192 DMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTT 251

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           ++ G  QN    +AL++FR ++ EG+  D    GS+L AC  L    + K+IH Y IR  
Sbjct: 252 MVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTL 311

Query: 393 LS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
              ++ + +A+VD+Y KC +I  +  VF  +  K+++SWT+MI  Y  NG   EA+ +F 
Sbjct: 312 YDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFS 371

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
            M    ++ +  TL S +S+ ++L+ L++G + +   +  G     +V+S+LV +Y +CG
Sbjct: 372 EMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCG 431

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
           +++ A+++F+ +   D + +T++++     G+ K  IDLF KM  +   P+ +TF+ +L 
Sbjct: 432 SIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLS 491

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           ACS SGL+ +G  +   M+ D+ +    +HY C++DL  R+  L+EA +F+R M   P A
Sbjct: 492 ACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDA 551

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
             W  LL ACR+  + E+G+  A+ LL+ DP NP +YVL+ ++ A+  +W +V  +R  M
Sbjct: 552 IGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGM 611

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           R   +KK PG SWI+  N++H F A D+SH  S  IY+KL  +  K+  E GY      V
Sbjct: 612 RDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEE-GYKPDVSSV 670

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           LH+V + EKV ML  HSE+LAIA+G++   E   IR+ KNLRVCVDCH+  K +S++ GR
Sbjct: 671 LHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGR 730

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           +++VRDA RFH F  G+CSCGD+W
Sbjct: 731 DILVRDAVRFHKFSNGICSCGDFW 754



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 219/472 (46%), Gaps = 50/472 (10%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA-------FTFP 62
           D ++LF  + QR   ++NA++  +   G P R    Y  +      VD         T  
Sbjct: 94  DMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMS 153

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
            ++ A + L D   G ++H  +++ G+ +  F  + LV MYAK      A+++FD M  K
Sbjct: 154 GMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVK 213

Query: 123 ------------------------------EDVVLWNSIISAYSASGQCLEALGLFREMQ 152
                                          D + W ++++  + +G   EAL +FR M+
Sbjct: 214 NVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMR 273

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
             G+  + YTF + L AC   +    G +IHA T+++  +  ++V +AL+ MY++C  + 
Sbjct: 274 AEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIR 333

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
            A  V  ++  K+ +SW +M+ G+ QN    +A++ F E+Q  G KP+     + +S+  
Sbjct: 334 LAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCA 393

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
            L +L  G + H  A+  G    + + + L+ +Y KC  +    R+F +M   D +S+T 
Sbjct: 394 NLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTA 453

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIH 385
           +++GYAQ     + ++LF  + L+G+  + +    VL ACS       G       ++ H
Sbjct: 454 LVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDH 513

Query: 386 GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIES-KDVVSWTSMISS 436
           G ++   L D      ++D+Y + G +  +      +    D + W +++S+
Sbjct: 514 GIVL---LDDH--YTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA 560



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 188/395 (47%), Gaps = 11/395 (2%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           +C  V +A  +F+ +  R   TW  M+     NG     L+ + RMR  G+ +D +TF  
Sbjct: 227 RCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGS 286

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++ AC  L   + G +IH   ++  YD   F+ ++LV MY+KC   R A  +F RM  K 
Sbjct: 287 ILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCK- 345

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +++ W ++I  Y  +G   EA+ +F EMQ  G+  N +T  + + +C + +    G + H
Sbjct: 346 NIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFH 405

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              + SG    + V++AL+ +Y +CG + +A  +  ++   D VS+ ++++G+ Q     
Sbjct: 406 CMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAK 465

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDLQIGNTL 302
           + +  F ++   G KP+ V  +  +SA  R G +  G    H+     G V        +
Sbjct: 466 ETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCM 525

Query: 303 MDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKA-LELFRTVQLEGLDA 360
           +D+Y++   +        QM    D I W T+++      C L+  +E+ +      L  
Sbjct: 526 IDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA-----CRLRGDMEIGKWAAENLLKT 580

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           D     S ++ CS      +  E+   ++R+G+ D
Sbjct: 581 DPQNPASYVLLCSMHASKGEWSEV--ALLRRGMRD 613



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 117/236 (49%), Gaps = 3/236 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC S+  AE +F +++ + + +W AM+  Y  NG     +  +S M+  GI  + FT
Sbjct: 325 MYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFT 384

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +CA L  L+ GA+ H + L  G      + ++LV +Y KC     A +LFD M 
Sbjct: 385 LGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEM- 443

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V + +++S Y+  G+  E + LF +M   G+  N  TF+  L AC  S     G 
Sbjct: 444 PFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGC 503

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLT 234
              H+     G  L       +I +Y+R G++ EA   + Q+    D++ W ++L+
Sbjct: 504 SYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLS 559


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/707 (33%), Positives = 393/707 (55%), Gaps = 5/707 (0%)

Query: 22  TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIH 81
           T+ ++NA++  + S G   +VL TY+ M    +  DA+TFP ++KAC+ L     G  +H
Sbjct: 33  TINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLH 92

Query: 82  GLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQC 141
             +L  G     +I +SL+  YAK      AR++FD M E+ +VV W SII  YS +G+ 
Sbjct: 93  QRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPER-NVVPWTSIIGCYSRTGRV 151

Query: 142 LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANAL 201
            EA  LF EM+R G+  ++ T ++ L    + +       +H + +  G    + ++N++
Sbjct: 152 PEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQC---LHGSAILYGFMSDINLSNSM 208

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           ++MY +C  +  +  +   ++ +D VSWNS+++ + Q    C+ +   + ++  G +PD 
Sbjct: 209 LSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDP 268

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
               + +S +   G L  G+ LH   ++  F  D  +  +L+ MY K   ++   R+F +
Sbjct: 269 QTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFER 328

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
              +D + WT +I+G  QN    KAL +FR +   G+ +    + SV+ AC+ L   +  
Sbjct: 329 SLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLG 388

Query: 382 KEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
             +HGY+ R  L  D+   N++V ++ KCG++D S  VF+ +  +++VSW +MI+ Y  N
Sbjct: 389 TSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQN 448

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
           G   +AL LF  M   +   DSIT+VS L   +S   L  GK ++ F+IR G      V 
Sbjct: 449 GYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVD 508

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFA 560
           +SLVDMY +CG LDIA + FN + + DL+ W+++I   G HG+G+ A+  + K       
Sbjct: 509 TSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMK 568

Query: 561 PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQ 620
           P+H+ FL++L +CSH+GL+ +G    E M  D+ + P  EH+AC+VDLL RA  +EEAY 
Sbjct: 569 PNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYN 628

Query: 621 FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRK 680
             +    +P  +V   +L ACR + N ELG+ +A  +L L P + GN+V +++ +A+  K
Sbjct: 629 LYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDAGNFVQLAHCYASINK 688

Query: 681 WKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
           W++V +    MR  GLKK PG S+I+I   I +F     SH +  EI
Sbjct: 689 WEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEI 735



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 151/523 (28%), Positives = 269/523 (51%), Gaps = 10/523 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G    A ++FD + +R V  W +++G Y   G        +  MR  GI   + T 
Sbjct: 114 YAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTM 173

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++   + L  + C   +HG  +  G+ S   + NS+++MY KC +   +R+LFD M +
Sbjct: 174 LSLLFGVSELAHVQC---LHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYM-D 229

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D+V WNS++SAY+  G   E L L + M+  G   +  TF + L          LG  
Sbjct: 230 QRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRC 289

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +++  +L  +V  +LI MY + G +  A  +  +  +KD V W +M++G VQN  
Sbjct: 290 LHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGS 349

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA+  FR++   G K       + ++A  +LG+   G  +H Y  +     D+   N+
Sbjct: 350 ADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNS 409

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ M+AKC  ++    VF +M  ++ +SW  +I GYAQN    KAL LF  ++ +    D
Sbjct: 410 LVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPD 469

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNVFE 420
            + I S+L  C+    +   K IH ++IR GL   ++++ ++VD+Y KCG++D ++  F 
Sbjct: 470 SITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFN 529

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            + S D+VSW+++I  Y ++G    AL  +    E+ ++ + +  +S LS+ S   ++++
Sbjct: 530 QMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQ 589

Query: 481 GKELNGFIIRK---GFNLEGSVASSLVDMYARCGALDIANKVF 520
           G  +   + R      NLE    + +VD+ +R G ++ A  ++
Sbjct: 590 GLNIYESMTRDFGIAPNLEHH--ACVVDLLSRAGRVEEAYNLY 630



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 228/436 (52%), Gaps = 3/436 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC ++  + +LFD + QR + +WN+++ AY   G    VL     MR+ G   D  T
Sbjct: 211 MYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQT 270

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+   A   +L  G  +HG +L+  +D    +  SL+ MY K  +   A ++F+R  
Sbjct: 271 FGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSL 330

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K DVVLW ++IS    +G   +AL +FR+M + G+ ++  T  + + AC       LG 
Sbjct: 331 DK-DVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGT 389

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    +    + +   N+L+ M+A+CG + +++ V  ++  ++ VSWN+M+TG+ QN 
Sbjct: 390 SVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNG 449

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             CKA+  F E++   Q PD +  V+ +      G L  GK +H++ I+ G    + +  
Sbjct: 450 YVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDT 509

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMY KC  ++   R F QM + D +SW+ II GY  +     AL  +      G+  
Sbjct: 510 SLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKP 569

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILNA-IVDVYGKCGNIDYSRNV 418
           + +I  SVL +CS    + Q   I+  + R  G++  +  +A +VD+  + G ++ + N+
Sbjct: 570 NHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNL 629

Query: 419 FESIESKDVVSWTSMI 434
           ++   S  V+    +I
Sbjct: 630 YKKKFSDPVLDVLGII 645



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 84/155 (54%)

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            S  S  + S+ ++I+ +   G   + L  +  M + +V SD+ T  S L A SSL++  
Sbjct: 27  PSSASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFS 86

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G  L+  I+  G +L+  +ASSL++ YA+ G  D+A KVF+ +  ++++ WTS+I    
Sbjct: 87  LGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYS 146

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
             GR   A  LF +M  +   P  +T L+LL+  S
Sbjct: 147 RTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVS 181


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 261/759 (34%), Positives = 405/759 (53%), Gaps = 68/759 (8%)

Query: 83  LVLKCGYDSTDFIVNSL-VAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQC 141
           L+L   Y ++  + NS  ++  ++     +AR+ FD +  K  +  WNSI+S Y A+G  
Sbjct: 6   LILHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKA-IGSWNSIVSGYFANGLP 64

Query: 142 LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANAL 201
            EA  +F EM    +V+                                        N L
Sbjct: 65  REARQMFDEMPERNIVS---------------------------------------WNGL 85

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           ++ Y +   + EA  V   +  ++ VSW +M+ G+VQ  +  +A   F  +      P++
Sbjct: 86  VSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRM------PER 139

Query: 262 VCTVNAVSASGRLGNLLNGKEL----HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
               N VS +   G L++G  +      Y +  G   D+     ++    +   V+    
Sbjct: 140 ----NEVSWTVMFGGLIDGGRIDDARKLYDMMPG--KDVVASTNMIGGLCREGRVDEARE 193

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV-QLEGLDADVMIIGSVLMACSGLK 376
           +F +M  ++ I+WTT+I GY QN     A +LF  + +   +    M++G  L   SG  
Sbjct: 194 IFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTL---SG-- 248

Query: 377 CMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
              + ++   +     +  ++  NA++   G+ G I  +R VF+ +E +D  +W  MI +
Sbjct: 249 ---RIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKA 305

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           Y   G   EALELF  M    V     +L+S LS  ++L+ L+ G++++  ++R  F+ +
Sbjct: 306 YERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGD 365

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             VAS L+ MY +CG L  A  VF+   +KD+I+W S+I+    HG G+ A+ +F++M  
Sbjct: 366 VYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPL 425

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
               P+ +T +A+L ACS+ G + EG +  E M   + + P  EHY+C VD+LGRA  ++
Sbjct: 426 SGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVD 485

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           +A + + SM I+P A VW ALLGAC+ HS  +L E+ AKKL E++P N G Y+L+S++ A
Sbjct: 486 KAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINA 545

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD-KSHSESDEIYKKLAEIT 735
           +  KW DV ++R  MR   + K PG SWIE+G K+H F     ++H E   I   L E T
Sbjct: 546 SRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMML-EKT 604

Query: 736 EKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVC 795
           + L RE GY      VLH+V+EEEKV  L  HSERLA+AYG+LK  EG  IR+ KNLRVC
Sbjct: 605 DGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVC 664

Query: 796 VDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
            DCH+  KL+S++  RE+++RDANRFHHF  G CSC DY
Sbjct: 665 GDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 3/233 (1%)

Query: 3   GKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFP 62
           G+ G ++ A ++FD++  R   TW  M+ AY   G  L  LE +++M+  G+     +  
Sbjct: 276 GEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLI 335

Query: 63  CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
            ++  CA L  L  G ++H  +++C +D   ++ + L+ MY KC +  KA+ +FDR   K
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSK 395

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D+++WNSIIS Y++ G   EAL +F EM   G + N  T +A L AC        G+EI
Sbjct: 396 -DIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEI 454

Query: 183 -HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
             +   K      V   +  + M  R GK+ +A  ++  +  K D+  W ++L
Sbjct: 455 FESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALL 507



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 157/338 (46%), Gaps = 37/338 (10%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G V +A ++FD++ +R V TW  M+  Y  N           R+ V     +       +
Sbjct: 186 GRVDEAREIFDEMRERNVITWTTMITGYGQN----------KRVDVARKLFEVMPEKTEV 235

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFI----------VNSLVAMYAKCYDFRKARQL 115
              +ML       +I         D+ +F            N+++    +  +  KAR++
Sbjct: 236 SWTSMLLGYTLSGRIE--------DAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRV 287

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD+M E  D   W  +I AY   G  LEAL LF +MQR G+  +  + ++ L  C   + 
Sbjct: 288 FDQM-EDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLAS 346

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G ++HA  V+   +  VYVA+ L+ MY +CG++ +A  V  +  +KD + WNS+++G
Sbjct: 347 LQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISG 406

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +  + L  +A++ F E+  +G  P++V  +  ++A    G L  G E     I +   S 
Sbjct: 407 YASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLE-----IFESMESK 461

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
             +  T+ + Y+  C V+ +GR      A + I+  TI
Sbjct: 462 FCVTPTV-EHYS--CTVDMLGRAGKVDKAMELINSMTI 496



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG ++ A+ +FD+   + +  WN+++  Y S+G     L+ +  M + G   +  T
Sbjct: 375 MYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVT 434

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDF-------RKAR 113
              ++ AC+    L+ G +I   +       + F V   V  Y+   D         KA 
Sbjct: 435 LIAILTACSYGGKLEEGLEIFESM------ESKFCVTPTVEHYSCTVDMLGRAGKVDKAM 488

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
           +L + M  K D  +W +++ A
Sbjct: 489 ELINSMTIKPDATVWGALLGA 509


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/697 (32%), Positives = 398/697 (57%), Gaps = 12/697 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-------FIVNSLVAMYAKCYDFRKAR 113
           +  ++ AC+ L+ L  G ++H  ++     S D        + N L+ MY +C     AR
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           Q+FD M  +  V  W S+I+A+  +G+  +ALGLF  M R G   + +   +A++AC + 
Sbjct: 107 QVFDEMPARNPVS-WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTEL 165

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                G ++HA  +KS +   + V NAL+ MY++ G + +   +  ++++KD +SW S++
Sbjct: 166 GDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSII 225

Query: 234 TGFVQNDLYCKAMQFFRELQGAG-QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
            GF Q     +A+Q FRE+   G   P++    +A  A G +G+   G+++H  +IK   
Sbjct: 226 AGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRL 285

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
             DL +G +L DMYA+C  ++     FY++ A D +SW +I+  Y+      +AL LF  
Sbjct: 286 DRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 345

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGN 411
           ++  GL  D + +  +L AC G   +   + IH Y+++ GL  D+ + N+++ +Y +C +
Sbjct: 346 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 405

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           +  + +VF  I+ +DVV+W S++++   +    E L+LF L+N++    D I+L + LSA
Sbjct: 406 LSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSA 465

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKDLIL 530
           ++ L   +  K+++ +  + G   +  ++++L+D YA+CG+LD A ++F  +   +D+  
Sbjct: 466 SAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFS 525

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W+S+I      G  K A DLF +M +    P+H+TF+ +L ACS  G +NEG  +  IM 
Sbjct: 526 WSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIME 585

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
            +Y + P  EH +C+VDLL RA  L EA  F+  M  EP   +W  LL A ++H++ E+G
Sbjct: 586 PEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMG 645

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
           +  A+ +L +DP +   YVL+ N++AAS  W +  +++  MR SG+KK+PG SW+++  +
Sbjct: 646 KRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGE 705

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           +  FI  D+SH ES+EIY  L  I  ++ +  GYV +
Sbjct: 706 LKVFIVEDRSHPESEEIYAMLELIGMEMIK-AGYVPK 741



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 181/601 (30%), Positives = 304/601 (50%), Gaps = 19/601 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYG+C +   A Q+FD++  R   +W +++ A+V NG     L  +S M   G + D F 
Sbjct: 95  MYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFA 154

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               ++AC  L D+  G ++H   LK    S   + N+LV MY+K         LF+R+ 
Sbjct: 155 LGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIK 214

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL-VTNAYTFVAALQACEDSSFETLG 179
           +K D++ W SII+ ++  G  +EAL +FREM   G    N + F +A +AC        G
Sbjct: 215 DK-DLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYG 273

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH  ++K   +  +YV  +L  MYARC  +  A    Y++E  D VSWNS++  +   
Sbjct: 274 EQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVE 333

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L  +A+  F E++ +G +PD +     + A      L +G+ +H+Y +K G   D+ + 
Sbjct: 334 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 393

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+ MYA+C  ++    VF+++  QD ++W +I+   AQ+N   + L+LF  +      
Sbjct: 394 NSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPS 453

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D + + +VL A + L      K++H Y  + GL  D ++ N ++D Y KCG++D +  +
Sbjct: 454 LDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRL 513

Query: 419 FESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           FE +  ++DV SW+S+I  Y   G A EA +LF  M    +  + +T +  L+A S +  
Sbjct: 514 FEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGF 573

Query: 478 LKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDLILWTSMI 535
           + +G      +  + G        S +VD+ AR G L + AN +       D+I+W +++
Sbjct: 574 VNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLL 633

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALL---YACSHSGLINEGKKFLEIM 589
            A+ +H     GK A +    ++     P H     LL   YA   SG  NE  +  + M
Sbjct: 634 AASKMHNDMEMGKRAAEGILNID-----PSHSAAYVLLCNIYAA--SGNWNEFARLKKAM 686

Query: 590 R 590
           R
Sbjct: 687 R 687


>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/659 (36%), Positives = 370/659 (56%), Gaps = 42/659 (6%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARC--GKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           ++HA   K+G +    +A  L+   A      +  A  +     N D    N+++ G  +
Sbjct: 23  QVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLAE 82

Query: 239 NDLYCKAMQFFRELQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           +D    ++  F E++     P D       + A+    +L +G +LH  AI  G  + L 
Sbjct: 83  SDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHLF 142

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +G TL+ MY++C  V +  +VF +M   + ++W  ++               FR   ++G
Sbjct: 143 VGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTA------------CFRCGDVKG 190

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
             AD+M                          R    +L   N ++  Y K G ++ +R 
Sbjct: 191 --ADMMFN------------------------RMPFRNLTSWNVMLAGYTKAGELELARK 224

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  +  KD VSW++MI  + HNG   EA   F  + +  +  + ++L  ALSA +    
Sbjct: 225 LFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGA 284

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           ++ GK L+GFI + GF    SV ++L+D Y++CG + +A  VF  +  K  ++ WTSMI 
Sbjct: 285 IEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIA 344

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
              +HG G+ AI LF++ME     PD I F+++LYACSH+GLI +G ++   M+  Y ++
Sbjct: 345 GLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIE 404

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHY C+VDL GRA  L++AY+F+  M + PTA +W  LLGAC +H N +L E V ++
Sbjct: 405 PAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKER 464

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L ELDP N G++VL+SN++A + KWKDV  VR  M    + KTPG S IE+   ++SF+A
Sbjct: 465 LSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVA 524

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            +  +S ++E Y+KL EI  KL  EG Y+ +   VLH++E+EEK   +  HSE+LA+A+G
Sbjct: 525 GEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFG 584

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +  +GS+IRI KNLRVC DCH+  KL+S+++G E+VVRD +RFH F+ G CSC DYW
Sbjct: 585 IARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 196/412 (47%), Gaps = 54/412 (13%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAFTFPCVIKACA 69
           A +LF       VF  N ++     +  P   L T+  MR  L   +D+F+F  ++KA A
Sbjct: 58  ARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAA 117

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
             + L+ G ++H   +  G D+  F+  +LV+MY++C     A+++F+ M E  +VV WN
Sbjct: 118 SYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEP-NVVAWN 176

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           ++++A    G    A  +F  M                                      
Sbjct: 177 AVVTACFRCGDVKGADMMFNRM-------------------------------------P 199

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
            +NL  +  N ++A Y + G++  A  +  ++  KD VSW++M+ GF  N  + +A  FF
Sbjct: 200 FRNLTSW--NVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFF 257

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           RELQ  G +P++V    A+SA    G +  GK LH +  K GF+  + + N L+D Y+KC
Sbjct: 258 RELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKC 317

Query: 310 CCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
             V     VF +M   +  +SWT++IAG A +    +A++LF  ++  G+  D +   S+
Sbjct: 318 GNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISI 377

Query: 369 LMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           L ACS       G +   + K+I  Y I   +        +VD+YG+ G +D
Sbjct: 378 LYACSHAGLIEKGYEYFYKMKDI--YNIEPAIEH---YGCMVDLYGRAGQLD 424



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 35/264 (13%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLRVLETYSRMRV- 51
           +CG V  A+ +F+++  R + +WN ML  Y   GE           P++   ++S M V 
Sbjct: 184 RCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVG 243

Query: 52  -------------------LGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDST 92
                              +G+  +  +    + ACA    ++ G  +HG + K G+   
Sbjct: 244 FAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWM 303

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
             + N+L+  Y+KC +   AR +F+RM EK  +V W S+I+  +  G   EA+ LF EM+
Sbjct: 304 VSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEME 363

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN--ALIAMYARCGK 210
             G+  +   F++ L AC  +     G E +   +K   N++  + +   ++ +Y R G+
Sbjct: 364 ESGIRPDGIAFISILYACSHAGLIEKGYE-YFYKMKDIYNIEPAIEHYGCMVDLYGRAGQ 422

Query: 211 MTEAAGVLYQLEN-KDSVSWNSML 233
           + +A   +  +     ++ W ++L
Sbjct: 423 LDKAYEFIIHMPVLPTAIIWRTLL 446



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 31/300 (10%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVI-----LNAIVDVYGKCGNIDYSRNVFE 420
           S+L  C  LK +   K++H Y+ + GL +D +I     L++ V V      +DY+R +F 
Sbjct: 10  SLLTNCRSLKNL---KQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDA---LDYARRLFL 63

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA-NVESDSITLVSALSAASSLSILK 479
              + DV    ++I     +     +L  F  M        DS +    L AA+S   L+
Sbjct: 64  HFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLE 123

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G +L+   I  G +    V ++LV MY+ CG +  A KVF  +   +++ W +++ A  
Sbjct: 124 SGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACF 183

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK-FLEIMRCDYQLDPW 598
             G  K A  +F +M   +      ++  +L   + +G +   +K FLE+        P 
Sbjct: 184 RCGDVKGADMMFNRMPFRNLT----SWNVMLAGYTKAGELELARKLFLEM--------PV 231

Query: 599 PEHYACLVDLLGRANH--LEEAYQFVRSMQ---IEPTAEVWCALLGACRVHSNKELGEIV 653
            +  +    ++G A++    EA+ F R +Q   + P        L AC      E G+I+
Sbjct: 232 KDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKIL 291


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/748 (34%), Positives = 408/748 (54%), Gaps = 86/748 (11%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +V ++ S++  YS      + + +F  MQ  G+  +A+ +   +++  +      G+  H
Sbjct: 64  NVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNG-----GIGFH 118

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN--KDSVSWNSMLTGFVQNDL 241
           A  +K G     +V NA+I MYAR G +  A  V  ++ +  +    WN+M++G+ + + 
Sbjct: 119 AHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWES 178

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A   F          D +   N ++ +                              
Sbjct: 179 EGQAQWLF----------DVMPERNVITWTA----------------------------- 199

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           ++  YAK   +    R F  M  +  +SW  +++GYAQN    + L LF  +   G++ D
Sbjct: 200 MVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPD 259

Query: 362 VMIIGSVLMACS--GLKCM--SQTKEIH------GYIIRKGLSDL--------------- 396
                +V+ ACS  G  C+  S  + +H         +R  L D+               
Sbjct: 260 ETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFD 319

Query: 397 --------VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
                   V  NA++  Y + GN+D +R +F ++  ++VV+W SMI+ Y  NG +  A+E
Sbjct: 320 ELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIE 379

Query: 449 LFYLMNEAN-VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
           LF  M  A  +  D +T+VS +SA   L  L+ G  +  F+      L  S  ++++ MY
Sbjct: 380 LFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMY 439

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
           +RCG+++ A +VF  + T+D++ + ++I+    HG G  AI+L   M+     PD +TF+
Sbjct: 440 SRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFI 499

Query: 568 ALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
            +L ACSH+GL+ EG+K  E ++     DP  +HYAC+VDLLGR   LE+A + +  M +
Sbjct: 500 GVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPM 554

Query: 628 EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQV 687
           EP A V+ +LL A R+H   ELGE+ A KL EL+P N GN++L+SN++A++ +WKDVE++
Sbjct: 555 EPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERI 614

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           R  M+  G+KKT G SW+E G K+H FI  D+SH  SD+IY+ L E+ +K+ RE GY+A 
Sbjct: 615 REAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKM-REAGYIAD 673

Query: 748 TQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSR 807
              VL +VEEEEK +++  HSE+LAI Y +L S  G++IR+ KNLRVC DCH+  K++S+
Sbjct: 674 KSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISK 733

Query: 808 LFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L GR ++VRD NRFH F  G+CSC DYW
Sbjct: 734 LEGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/588 (23%), Positives = 267/588 (45%), Gaps = 95/588 (16%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           LF+      VF + +ML  Y    +  +V+  +  M+  G+  DAF +P +IK+      
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG---- 111

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-DVVLWNSII 132
            + G   H  VLK G+ S  F+ N+++ MYA+      AR++FD + + E  V  WN+++
Sbjct: 112 -NGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
           S Y       +A  LF  M    ++T                                  
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVIT---------------------------------- 196

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
                  A++  YA+   +  A      +  +  VSWN+ML+G+ QN L  + ++ F E+
Sbjct: 197 -----WTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEM 251

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
             AG +PD+   V  +SA    G+      L     ++    +  +   L+DMYAKC  +
Sbjct: 252 VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSI 311

Query: 313 NYMGRVFYQ--------------------------------MTAQDFISWTTIIAGYAQN 340
               R+F +                                M  ++ ++W ++IAGYAQN
Sbjct: 312 GAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQN 371

Query: 341 NCHLKALELFR-TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL 399
                A+ELF+  +  + L  D + + SV+ AC  L  +    E+  +++R    + + L
Sbjct: 372 GQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGAL----ELGNWVVRFLTENQIKL 427

Query: 400 -----NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
                NA++ +Y +CG+++ ++ VF+ + ++DVVS+ ++IS +  +G   EA+ L   M 
Sbjct: 428 SISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMK 487

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
           E  +E D +T +  L+A S   +L++G+++   I     +      + +VD+  R G L+
Sbjct: 488 EGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDH----YACMVDLLGRVGELE 543

Query: 515 IANKVFNCVQTKDLI-LWTSMINANGLHGR---GKVAIDLFYKMEAES 558
            A +    +  +    ++ S++NA+ +H +   G++A +  +++E ++
Sbjct: 544 DAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDN 591



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 202/466 (43%), Gaps = 96/466 (20%)

Query: 1   MYGKCGSVLDAEQLFDKVS--QRTVFTWNAMLGAYV---SNGEPLRVLETYSRMRVLGIS 55
           MY + G +  A ++FD++   +R V  WNAM+  Y    S G+   + +      V+  +
Sbjct: 139 MYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWT 198

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
                                                     ++V  YAK  D   AR+ 
Sbjct: 199 ------------------------------------------AMVTGYAKVKDLEAARRY 216

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M E+  VV WN+++S Y+ +G   E L LF EM   G+  +  T+V  + AC     
Sbjct: 217 FDCMPER-SVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGD 275

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL-------------- 221
             L   +     +    L  +V  AL+ MYA+CG +  A  +  +L              
Sbjct: 276 PCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMIS 335

Query: 222 ------------------ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQV 262
                               ++ V+WNSM+ G+ QN     A++ F+E+  A +  PD+V
Sbjct: 336 AYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEV 395

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG------NTLMDMYAKCCCVNYMG 316
             V+ +SA G LG L    EL  + ++  F+++ QI       N ++ MY++C  +    
Sbjct: 396 TMVSVISACGHLGAL----ELGNWVVR--FLTENQIKLSISGHNAMIFMYSRCGSMEDAK 449

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           RVF +M  +D +S+ T+I+G+A +   ++A+ L  T++  G++ D +    VL ACS   
Sbjct: 450 RVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAG 509

Query: 377 CMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            + + +++   I    +     +   VD+ G+ G ++ ++   E +
Sbjct: 510 LLEEGRKVFESIKDPAIDHYACM---VDLLGRVGELEDAKRTMERM 552



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 48/253 (18%), Positives = 98/253 (38%), Gaps = 27/253 (10%)

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           Y+  +F S  + +V  +TSM+  Y H     + + +F  M    V  D+      + +A 
Sbjct: 52  YTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG 111

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ--TKDLILW 531
           +      G   +  +++ G   +  V ++++DMYAR G +  A KVF+ +    + +  W
Sbjct: 112 N-----GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADW 166

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            +M++              ++K E+E  A      +      + + ++    K  ++   
Sbjct: 167 NAMVSG-------------YWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAA 213

Query: 592 DYQLDPWPEH----YACLVDLLGRANHLEEAYQFVRSM---QIEPTAEVWCALLGACRVH 644
               D  PE     +  ++    +    EE  +    M    IEP    W  ++ AC   
Sbjct: 214 RRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSR 273

Query: 645 SNKELGEIVAKKL 657
            +  L   + + L
Sbjct: 274 GDPCLAASLVRTL 286


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/569 (38%), Positives = 340/569 (59%), Gaps = 3/569 (0%)

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           ++A  +  NL + +++H +     F  D  + N+L+ +Y KC  V    +VF +M  +D 
Sbjct: 58  ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDM 117

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SWT++IAGYAQN+   +A+ L   +       +     S+L A           +IH  
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHAL 177

Query: 388 IIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            ++     D+ + +A++D+Y +CG +D +  VF+ ++SK+ VSW ++IS +   G    A
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L +F  M     E+   T  S  S  + +  L++GK ++  +++    L   V ++++DM
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDM 297

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           YA+ G++  A KVF  V  KDL+ W SM+ A   +G GK A+  F +M       + ITF
Sbjct: 298 YAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITF 357

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           L +L ACSH GL+ EGK + ++++ +Y L+P  EHY  +VDLLGRA  L  A  F+  M 
Sbjct: 358 LCILTACSHGGLVKEGKHYFDMIK-EYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMP 416

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           +EPTA VW ALL ACR+H N ++G+  A  + +LDP + G  VL+ N++A++  W    +
Sbjct: 417 MEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAAR 476

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR  M+ +G+KK P  SW+EIGN +H F+A D +H  ++EIYK   EI+ K+ +E GYV 
Sbjct: 477 VRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKE-GYVP 535

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
              +VL +V+E+E+   L  HSE++A+A+ +++   G+ IRI KN+R+C DCHS  K +S
Sbjct: 536 DMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYIS 595

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++F RE+VVRD NRFHHF  G CSCGDYW
Sbjct: 596 KVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 214/414 (51%), Gaps = 11/414 (2%)

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           L      + A + AC  S       +IH     S      ++ N+LI +Y +CG + EA 
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            V  ++  KD VSW S++ G+ QND+  +A+     +     KP+     + + A+G   
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +   G ++HA A+K  +  D+ +G+ L+DMYA+C  ++    VF ++ +++ +SW  +I+
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGL 393
           G+A+      AL +F  +Q  G +A      S+    +G+  + Q K +H +++  R+ L
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKL 286

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
           +  V  N ++D+Y K G++  +R VFE + +KD+V+W SM++++   GL  EA+  F  M
Sbjct: 287 TAFV-GNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS--SLVDMYARCG 511
            ++ +  + IT +  L+A S   ++K+GK    F + K +NLE  +    ++VD+  R G
Sbjct: 346 RKSGIYLNQITFLCILTACSHGGLVKEGKHY--FDMIKEYNLEPEIEHYVTVVDLLGRAG 403

Query: 512 ALDIANK-VFNCVQTKDLILWTSMINANGLHGRGKV---AIDLFYKMEAESFAP 561
            L+ A   +F         +W +++ A  +H   KV   A D  ++++ +   P
Sbjct: 404 LLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGP 457



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 197/378 (52%), Gaps = 3/378 (0%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +   I ACA  K+LD   KIHG +    ++   F+ NSL+ +Y KC    +A ++FD+M 
Sbjct: 54  YHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKM- 112

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K+D+V W S+I+ Y+ +    EA+GL   M +     N +TF + L+A    +   +G 
Sbjct: 113 RKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGG 172

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA  VK   +  VYV +AL+ MYARCGKM  A  V  +L++K+ VSWN++++GF +  
Sbjct: 173 QIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+  F E+Q  G +       +  S    +G L  GK +HA+ +K        +GN
Sbjct: 233 DGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGN 292

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           T++DMYAK   +    +VF ++  +D ++W +++  +AQ     +A+  F  ++  G+  
Sbjct: 293 TMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR-NV 418
           + +    +L ACS    + + K     I    L  ++     +VD+ G+ G ++Y+   +
Sbjct: 353 NQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFI 412

Query: 419 FESIESKDVVSWTSMISS 436
           F+         W +++++
Sbjct: 413 FKMPMEPTAAVWGALLAA 430



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 169/337 (50%), Gaps = 2/337 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCGSV++A ++FDK+ ++ + +W +++  Y  N  P   +     M       + FT
Sbjct: 95  LYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFT 154

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++KA     D   G +IH L +KC +    ++ ++L+ MYA+C     A  +FD++ 
Sbjct: 155 FASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD 214

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  V  WN++IS ++  G    AL +F EMQR G     +T+ +             G 
Sbjct: 215 SKNGVS-WNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGK 273

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  VKS Q L  +V N ++ MYA+ G M +A  V  ++ NKD V+WNSMLT F Q  
Sbjct: 274 WVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYG 333

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A+  F E++ +G   +Q+  +  ++A    G +  GK       +     +++   
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYV 393

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAG 336
           T++D+  +   +NY     ++M  +   + W  ++A 
Sbjct: 394 TVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/714 (33%), Positives = 403/714 (56%), Gaps = 5/714 (0%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D  L N +I  ++ +G    AL  +R M   G   + +TF   ++ C        G   H
Sbjct: 71  DAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAH 130

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              +K G    VY  N+L+A YA+ G + +A  V   +  +D V+WN+M+ G+V N L  
Sbjct: 131 GMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGS 190

Query: 244 KAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            A+  F+E+  A + + D V  + A++A     + + GKE+H Y I+ G   D+++G +L
Sbjct: 191 LALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSL 250

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMY KC  V Y   VF  M  +  ++W  +I GYA N    +A + F  ++ EGL  +V
Sbjct: 251 LDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEV 310

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFES 421
           +   ++L AC+  +     + +HGY++R+  L  +V+  A++++YGK G ++ S  +F  
Sbjct: 311 VTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGK 370

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           I +K +VSW +MI++Y++  +  EA+ LF  +    +  D  T+ + + A   L  L+  
Sbjct: 371 IANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHC 430

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           ++++ +II  G+     + ++++ MYAR G +  + ++F+ + +KD+I W +MI    +H
Sbjct: 431 RQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIH 490

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G+GK A+++F +M+     P+  TF+++L ACS SGL++EG     +M  +Y + P  EH
Sbjct: 491 GQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEH 550

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           Y C+ DLLGR   L E  QF+ SM I+PT+ VW +LL A R  ++ ++ E  A+++ +L+
Sbjct: 551 YGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLE 610

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
             N G Y+++S+++A + +W+DVE+VR+ M+  GL++T   S +E+ +   SF   D SH
Sbjct: 611 HDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSH 670

Query: 722 SESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKST 781
           S+S  I++    ++ K+E       Q+  V           M   HS RLA+ +G++ S 
Sbjct: 671 SQSRTIHEVSNILSRKIEETDDTRNQSYPV---PVATRTTTMPNKHSVRLAVVFGLISSE 727

Query: 782 EGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            GS I + KN+R+C  CH   KL+SR  GR +VV D+  +H F  G C CGDYW
Sbjct: 728 IGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 248/480 (51%), Gaps = 7/480 (1%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G + +A +    V     F  N M+  +   G P   L  Y  M   G   D FTFP V+
Sbjct: 55  GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           K CA L  LD G   HG+V+K G +   +  NSLVA YAK      A ++FD M  + D+
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVR-DI 173

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQAC--EDSSFETLGMEI 182
           V WN+++  Y ++G    AL  F+EM     V  ++   +AAL AC  E SS +  G EI
Sbjct: 174 VTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQ--GKEI 231

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H   ++ G    + V  +L+ MY +CG++  A  V   +  +  V+WN M+ G+  N+  
Sbjct: 232 HGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERP 291

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A   F +++  G + + V  +N ++A  +  + L G+ +H Y +++ F+  + +   L
Sbjct: 292 DEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETAL 351

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           ++MY K   V    ++F ++  +  +SW  +IA Y     + +A+ LF  +  + L  D 
Sbjct: 352 LEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDY 411

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFES 421
             + +V+ A   L  +   ++IH YII  G ++  +I+NA++ +Y + G++  SR +F+ 
Sbjct: 412 FTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDK 471

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           + SKDV+SW +MI  Y  +G    ALE+F  M    ++ +  T VS L+A S   ++ +G
Sbjct: 472 MVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 185/373 (49%), Gaps = 2/373 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAFT 60
           Y K G V DAE++FD +  R + TWN M+  YVSNG     L  +  M   L +  D+  
Sbjct: 152 YAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVG 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + AC +      G +IHG V++ G +    +  SL+ MY KC +   AR +F  M 
Sbjct: 212 IIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMP 271

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  VV WN +I  Y+ + +  EA   F +M+  GL     T +  L AC  +     G 
Sbjct: 272 LRT-VVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGR 330

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   V+      V +  AL+ MY + GK+  +  +  ++ NK  VSWN+M+  ++  +
Sbjct: 331 SVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKE 390

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +Y +A+  F EL      PD       V A   LG+L + +++H+Y I  G+  +  I N
Sbjct: 391 MYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++ MYA+   V     +F +M ++D ISW T+I GYA +     ALE+F  ++  GL  
Sbjct: 451 AVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQP 510

Query: 361 DVMIIGSVLMACS 373
           +     SVL ACS
Sbjct: 511 NESTFVSVLTACS 523



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 190/378 (50%), Gaps = 4/378 (1%)

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
           + +L+   A  G+M EA   L  +   D+   N M+ GF    L   A+  +R +   G 
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +PD+      V    RLG L  G+  H   IK G   D+   N+L+  YAK   V    R
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ--LEGLDADVMIIGSVLMACSGL 375
           VF  M  +D ++W T++ GY  N     AL  F+ +   LE     V II ++   C  +
Sbjct: 164 VFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEV 223

Query: 376 KCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
             M Q KEIHGY+IR GL  D+ +  +++D+Y KCG + Y+R+VF ++  + VV+W  MI
Sbjct: 224 SSM-QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMI 282

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
             Y  N   +EA + F  M    ++ + +T ++ L+A +       G+ ++G+++R+ F 
Sbjct: 283 GGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFL 342

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
               + ++L++MY + G ++ + K+F  +  K L+ W +MI A         AI LF ++
Sbjct: 343 PHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL 402

Query: 555 EAESFAPDHITFLALLYA 572
             +   PD+ T   ++ A
Sbjct: 403 LNQPLYPDYFTMSTVVPA 420



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 14/280 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  A  +F  +  RTV TWN M+G Y  N  P    + + +MR  G+ V+  T
Sbjct: 253 MYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVT 312

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA  +    G  +HG V++  +     +  +L+ MY K      + ++F ++ 
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG- 179
            K  +V WN++I+AY       EA+ LF E+    L  + +T    + A     F  LG 
Sbjct: 373 NKT-LVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPA-----FVLLGS 426

Query: 180 ----MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                +IH+  +  G      + NA++ MYAR G +  +  +  ++ +KD +SWN+M+ G
Sbjct: 427 LRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMG 486

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQ---VCTVNAVSASG 272
           +  +     A++ F E++  G +P++   V  + A S SG
Sbjct: 487 YAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSG 526



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + G V+ + ++FDK+  + V +WN M+  Y  +G+    LE +  M+  G+  +  T
Sbjct: 455 MYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNEST 514

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK-CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC++   +D G     L+L+  G          +  +  +  D R+  Q  + M
Sbjct: 515 FVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESM 574

Query: 120 GEKEDVVLWNSIISA 134
                  +W S+++A
Sbjct: 575 PIDPTSRVWGSLLTA 589


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/711 (32%), Positives = 385/711 (54%), Gaps = 78/711 (10%)

Query: 199 NALIAMYARCGKMTEAAGVLYQ--LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
             +++ Y   G +  A  V  +  +  +D+V +N+M+TGF  N+    A+  F +++  G
Sbjct: 84  TTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGK----ELHAYAIKQGFVSDLQIGNTLMDMYAKCCC- 311
            KPD     + ++    L  +++ +    + HA A+K G      + N L+ +Y++C   
Sbjct: 144 FKPDDFTYASVLAG---LALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASS 200

Query: 312 ---VNYMGRVFYQMTAQDFISWTTIIAGYAQNNC-------------------------- 342
              ++   +VF  +  +D  SWTT++ GY +N C                          
Sbjct: 201 PSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISG 260

Query: 343 ------HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL 396
                 + +ALE+ R +   G++ D     SV+ AC+  + +   K++H Y++R+     
Sbjct: 261 YVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSF 320

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV------------------ 438
              N++V +Y KCG  + +R +FE + +KD+VSW +++S YV                  
Sbjct: 321 HFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380

Query: 439 -------------HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
                         NG   E L+LF  M     E        A+ + + L     G++ +
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFH 440

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
             +++ GF+   S  ++L+ MYA+CG ++ A +VF  +   D + W ++I A G HG G 
Sbjct: 441 AQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGV 500

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A+D++ +M  +   PD ITFL +L ACSH+GL+++G+K+   M   Y++ P  +HYA L
Sbjct: 501 EAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARL 560

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           +DLL R+    EA   + S+  +PTAE+W ALL  CRVH N ELG I A KL  L P + 
Sbjct: 561 IDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
           G Y+L+SN++AA+ +W++V +VR  MR  G+KK    SWIE+  ++H+F+  D SH E++
Sbjct: 621 GTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAE 680

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE-EKVQMLYGHSERLAIAYGVLKSTEGS 784
            +YK L ++ +++ R  GYV  T FVLH+VE +  K  ML  HSE++A+A+G++K   G+
Sbjct: 681 AVYKYLQDLGKEMRRL-GYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGT 739

Query: 785 LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            IRI KNLR C DCH+F + +S++  R++++RD  RFHHF  G CSCG++W
Sbjct: 740 TIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 146/646 (22%), Positives = 275/646 (42%), Gaps = 137/646 (21%)

Query: 65  IKACAMLK--DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           ++ C  L+   L     +HG ++  G+     I+N L+ +Y K  +   ARQLFD + E 
Sbjct: 19  LRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEP 78

Query: 123 E--------------------------------DVVLWNSIISAYSASGQCLEALGLFRE 150
           +                                D V++N++I+ +S +     A+ LF +
Sbjct: 79  DKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 151 MQRVGLVTNAYTFVAALQA----CEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
           M+  G   + +T+ + L       +D   E   ++ HAA +KSG      V+NAL+++Y+
Sbjct: 139 MKHEGFKPDDFTYASVLAGLALVVDD---EKQCVQFHAAALKSGAGYVTSVSNALVSVYS 195

Query: 207 RCGK----MTEAAGVLYQLENKDSVSWNSMLTGFVQN----------------------- 239
           RC      +  A  V   +  KD  SW +M+TG+V+N                       
Sbjct: 196 RCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYN 255

Query: 240 ---------DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
                     LY +A++  R +  +G + D+    + + A      L  GK++HAY +++
Sbjct: 256 AMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR 315

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY------------- 337
              S     N+L+ +Y KC   N    +F +M A+D +SW  +++GY             
Sbjct: 316 EDFS-FHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374

Query: 338 ------------------AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
                             A+N    + L+LF  ++ EG +         + +C+ L    
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434

Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
             ++ H  +++ G  S L   NA++ +Y KCG ++ ++ VF ++   D VSW ++I++  
Sbjct: 435 NGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALG 494

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            +G   EA++++  M +  +  D IT ++ L+A S   ++ +G        RK FN   +
Sbjct: 495 QHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQG--------RKYFNSMET 546

Query: 499 V---------ASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---GK 545
           V          + L+D+  R G    A  +   +  K    +W ++++   +HG    G 
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGI 606

Query: 546 VAIDLFYKMEAESFAPDHI-TFLALLYACSHSGLINEGKKFLEIMR 590
           +A D  + +      P+H  T++ L    + +G   E  +  ++MR
Sbjct: 607 IAADKLFGL-----IPEHDGTYMLLSNMYAATGQWEEVARVRKLMR 647



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/510 (24%), Positives = 229/510 (44%), Gaps = 81/510 (15%)

Query: 2   YGKCGSVLDAEQLFDK--VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           Y   G +  A  +F++  VS R    +NAM+  +  N +    +  + +M+  G   D F
Sbjct: 90  YCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDF 149

Query: 60  TFPCVIKACAMLKDLD--CGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD----FRKAR 113
           T+  V+   A++ D +  C  + H   LK G      + N+LV++Y++C         AR
Sbjct: 150 TYASVLAGLALVVDDEKQC-VQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSAR 208

Query: 114 QLFDRMGEKED-------------------------------VVLWNSIISAYSASGQCL 142
           ++FD + EK++                               +V +N++IS Y   G   
Sbjct: 209 KVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQ 268

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           EAL + R M   G+  + +T+ + ++AC ++    LG ++HA  ++  ++   +  N+L+
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR-EDFSFHFDNSLV 327

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ--------- 253
            +Y +CGK  EA  +  ++  KD VSWN++L+G+V +    +A   F+E++         
Sbjct: 328 TLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387

Query: 254 --------GAGQ--------------KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
                   G G+              +P       A+ +   LG   NG++ HA  +K G
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIG 447

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F S L  GN L+ MYAKC  V    +VF  M   D +SW  +IA   Q+   ++A++++ 
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYE 507

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG-----YIIRKGLSDLVILNAIVDVY 406
            +  +G+  D +   +VL ACS    + Q ++        Y I  G      L   +D+ 
Sbjct: 508 EMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARL---IDLL 564

Query: 407 GKCGNIDYSRNVFESIESKDVVS-WTSMIS 435
            + G    + ++ ES+  K     W +++S
Sbjct: 565 CRSGKFSEAESIIESLPFKPTAEIWEALLS 594



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/480 (23%), Positives = 196/480 (40%), Gaps = 113/480 (23%)

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           R  +L   + +H   I  GF     I N L+D+Y K   ++Y  ++F +++  D I+ TT
Sbjct: 26  RRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTT 85

Query: 333 IIAGY---------------------------------AQNNCHLKALELFRTVQLEGLD 359
           +++GY                                 + NN    A+ LF  ++ EG  
Sbjct: 86  MVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145

Query: 360 ADVMIIGSVLMACSGLKCM----SQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGN--- 411
            D     SVL   +GL  +     Q  + H   ++ G   +  + NA+V VY +C +   
Sbjct: 146 PDDFTYASVL---AGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPS 202

Query: 412 -IDYSRNVFESIESKDVVSWTSMISSYVHNG----------------------------- 441
            +  +R VF+ I  KD  SWT+M++ YV NG                             
Sbjct: 203 LLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYV 262

Query: 442 ---LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
              L  EALE+   M  + +E D  T  S + A ++  +L+ GK+++ +++R+  +    
Sbjct: 263 NCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFH 321

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTS------------------------- 533
             +SLV +Y +CG  + A  +F  +  KDL+ W +                         
Sbjct: 322 FDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381

Query: 534 ----MINANGL--HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-L 586
               MI  +GL  +G G+  + LF  M+ E F P    F   + +C+  G    G++F  
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHA 441

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
           ++++  +  D        L+ +  +   +EEA Q  R+M    +   W AL+ A   H +
Sbjct: 442 QLVKIGF--DSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVS-WNALIAALGQHGH 498



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 123/279 (44%), Gaps = 56/279 (20%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVS------------------------- 35
           +Y KCG   +A  +F+K+  + + +WNA+L  YVS                         
Sbjct: 329 LYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388

Query: 36  ------NGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                 NG     L+ +S M+  G     + F   IK+CA+L     G + H  ++K G+
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGF 448

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           DS+    N+L+ MYAKC    +A+Q+F  M    D V WN++I+A    G  +EA+ ++ 
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEAQQVFRTM-PCLDSVSWNALIAALGQHGHGVEAVDVYE 507

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL-----QVYVANA---- 200
           EM + G+  +  TF+  L AC            HA  V  G+        VY        
Sbjct: 508 EMLKKGIRPDRITFLTVLTACS-----------HAGLVDQGRKYFNSMETVYRIPPGADH 556

Query: 201 ---LIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
              LI +  R GK +EA  ++  L  K +   W ++L+G
Sbjct: 557 YARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSG 595



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 127/321 (39%), Gaps = 59/321 (18%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V +A+Q+F  +      +WNA++ A   +G  +  ++ Y  M   GI  D  T
Sbjct: 461 MYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRIT 520

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FRKAR 113
           F  V+ AC+    +D G K    +       T + +      YA+  D       F +A 
Sbjct: 521 FLTVLTACSHAGLVDQGRKYFNSM------ETVYRIPPGADHYARLIDLLCRSGKFSEAE 574

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
            + + +  K    +W +++S     G     LG+    +  GL+              D 
Sbjct: 575 SIIESLPFKPTAEIWEALLSGCRVHGNM--ELGIIAADKLFGLIPE-----------HDG 621

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
           ++  L   ++AAT   GQ  +V          AR  K+    GV  ++    + SW  M 
Sbjct: 622 TYMLLS-NMYAAT---GQWEEV----------ARVRKLMRDRGVKKEV----ACSWIEME 663

Query: 234 TG----FVQNDLYCKAMQFFRELQGAGQK-------PDQVCTVNAVSASGRLGNLLNGKE 282
           T      V +  + +A   ++ LQ  G++       PD    ++ V + G   ++L    
Sbjct: 664 TQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLT--- 720

Query: 283 LHAYAIKQGF-VSDLQIGNTL 302
            H+  I   F +  L  G T+
Sbjct: 721 THSEKIAVAFGLMKLPPGTTI 741


>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/620 (37%), Positives = 368/620 (59%), Gaps = 9/620 (1%)

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K  +  WN+++ + S      + +  F +M R     + +T   AL+AC +      G  
Sbjct: 3   KRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEM 62

Query: 182 IHA---ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           IH      V  G +L  YV ++LI MY +CG+MTEA  +  +LE  D V+W+SM++GF +
Sbjct: 63  IHGFLKKNVTLGSDL--YVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120

Query: 239 NDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           N    +A++FFR +  A    PD+V  +  VSA  +L N   G+ +H + +++GF +DL 
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N+L++ YAK         +F  M  +D ISW+T+IA Y QN    +AL +F  +  +G
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDG 240

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
            + +V  +  VL AC+    + Q ++ H   IRKGL +++ +  A+VD+Y KC + + + 
Sbjct: 241 TEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN-EANVESDSITLVSALSAASSL 475
            VF  I  KDVVSW ++IS +  NG+A+ ++E F +M  E N   D+I ++  L + S L
Sbjct: 301 AVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSEL 360

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             LK+ +  + ++I+ GF+    + +SLV++Y+RCG+L  A+KVFN +  KD ++WTS+I
Sbjct: 361 GFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLI 420

Query: 536 NANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
              G+HG+G  A++ F  M  +    P+ +TFL++L ACSH+GLI+EG +  E+M  DY+
Sbjct: 421 TGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYR 480

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           L P  EHYA LVDLLGR   L+ A +  + M   PT ++   LLGACR+H N E+ E VA
Sbjct: 481 LAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVA 540

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           K+L EL+  + G Y+L+SN++    +W++VE++R  ++  G+KK    S IEI  K+H F
Sbjct: 541 KQLFELESNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHKF 600

Query: 715 IARDKSHSESDEIYKKLAEI 734
           +A D  H E + +Y  L E+
Sbjct: 601 VADDDLHPEKEPVYGLLKEL 620



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 268/507 (52%), Gaps = 11/507 (2%)

Query: 18  VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCG 77
           +++RT++ WN +L +   +    +V+  +S+M       D FT P  +KAC  L+++  G
Sbjct: 1   MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60

Query: 78  AKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
             IHG + K     +D  V +SL+ MY KC    +A ++F+ + EK D+V W+S++S + 
Sbjct: 61  EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNEL-EKPDIVTWSSMVSGFE 119

Query: 137 ASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
            +G   +A+  FR M     VT +  T +  + AC   S   LG  +H   ++ G +  +
Sbjct: 120 KNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDL 179

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
            + N+L+  YA+     EA  +   +  KD +SW++++  +VQN    +A++ F E+   
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDD 239

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           G +P+    +  + A     +L  G++ H  AI++G  +++++   L+DMY KC      
Sbjct: 240 GTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 299

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSG 374
             VF ++  +D +SW  +I+G+  N    +++E F  + LE     D +++  VL +CS 
Sbjct: 300 YAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSE 359

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L  + Q +  H Y+I+ G  S+  I  ++V++Y +CG++  +  VF  I  KD V WTS+
Sbjct: 360 LGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSL 419

Query: 434 ISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII--- 489
           I+ Y  +G   +ALE F +++  + V+ + +T +S LSA S   ++ +G  +   ++   
Sbjct: 420 ITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDY 479

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIA 516
           R   NLE      LVD+  R G LD A
Sbjct: 480 RLAPNLEHYAV--LVDLLGRVGELDTA 504



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 222/423 (52%), Gaps = 16/423 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           MY KCG + +A ++F+++ +  + TW++M+  +  NG P + +E + RM     ++ D  
Sbjct: 86  MYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRV 145

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++ AC  L +   G  +HG V++ G+ +   +VNSL+  YAK   F++A  LF  M
Sbjct: 146 TLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMM 205

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK DV+ W+++I+ Y  +G   EAL +F EM   G   N  T +  LQAC  ++    G
Sbjct: 206 AEK-DVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQG 264

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            + H   ++ G   +V V+ AL+ MY +C    EA  V  ++  KD VSW ++++GF  N
Sbjct: 265 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLN 324

Query: 240 DLYCKAMQFFR-ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
            +  ++++ F   L     +PD +  +  + +   LG L   +  H+Y IK GF S+  I
Sbjct: 325 GMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFI 384

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEG 357
           G +L+++Y++C  +    +VF ++  +D + WT++I GY  +    KALE F   V+   
Sbjct: 385 GASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSE 444

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
           +  + +   S+L ACS       GL+       ++ Y +   L    +L   VD+ G+ G
Sbjct: 445 VKPNEVTFLSILSACSHAGLIHEGLRIFELM--VNDYRLAPNLEHYAVL---VDLLGRVG 499

Query: 411 NID 413
            +D
Sbjct: 500 ELD 502


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/717 (31%), Positives = 407/717 (56%), Gaps = 8/717 (1%)

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D  L N +I  ++ +G    AL  +R M   G   + +TF   ++ C        G   
Sbjct: 70  PDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAA 129

Query: 183 HAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           H+A ++ G    +VY  N+L+A YA+ G + +A  V   +  +D V+WNSM+ G+V N L
Sbjct: 130 HSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGL 189

Query: 242 YCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              A+  FRE+ +G   + D V  + A++A      L+ G+E+HAY I+ G   D+++G 
Sbjct: 190 GALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGT 249

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMY KC  +     +F  M ++  ++W  +I GYA N C  +A + F  ++ EG   
Sbjct: 250 SLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQV 309

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
           +V+   ++L AC+  +     + +HGY+ R + L  +V+  A++++Y K G +  S  +F
Sbjct: 310 EVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIF 369

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             + +K +VSW +MI++Y++  + NEA+ LF  +    +  D  T+ + + A   L +L+
Sbjct: 370 GQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLR 429

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           + ++++ +I+R  +     V ++++ MYARCG +  + K+F+ +  KD+I W ++I    
Sbjct: 430 QCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYA 489

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HG+GK+A+++F +M++    P+  TF+++L ACS SG+ +EG     +M+ DY + P  
Sbjct: 490 IHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQI 549

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C+ DLLGRA  L E  +F+ S+ I PT  +W +LL A R  ++ ++ E  A+++ E
Sbjct: 550 EHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFE 609

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           L+  N G YV++S+++A + +W+DV+++R  M   GL++T   S +E+     SF+  D 
Sbjct: 610 LEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDM 669

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG-HSERLAIAYGVL 778
           +H +S  I+    E+++ L R+ G     + +   +    +  ++   HS RLA+ +G++
Sbjct: 670 THPQSKTIH----EVSDVLSRKIGETDYPRNLSDPISLTSRRTIIPNKHSVRLAVVFGLI 725

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            S   + I + KN+R+C  CH   KL+S+   R +VV D N +H F  G C CGDYW
Sbjct: 726 SSEARAPILVKKNVRICNHCHHALKLISKYSRRRIVVGDTNIYHEFLDGSCCCGDYW 782



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 266/539 (49%), Gaps = 14/539 (2%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
           S    F  N ++  +   G P   L  Y  M   G   D FTFP V+K CA L  L+ G 
Sbjct: 68  SSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGR 127

Query: 79  KIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
             H   ++ G   ++ +  NSL+A YAK      A ++FD M  + D+V WNS++  Y +
Sbjct: 128 AAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVR-DIVTWNSMVDGYVS 186

Query: 138 SGQCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
           +G    AL  FREM   + +  +    +AAL AC   S    G E+HA  ++ G    V 
Sbjct: 187 NGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVK 246

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V  +L+ MY +CG +  A G+   + ++  V+WN M+ G+  N    +A   F +++  G
Sbjct: 247 VGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEG 306

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            + + V  +N ++A  +  + L G+ +H Y  +  F+  + +   L++MY+K   V    
Sbjct: 307 HQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSE 366

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            +F QMT +  +SW  +IA Y     + +A+ LF  +  + L  D   + +V+ A   L 
Sbjct: 367 TIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLG 426

Query: 377 CMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            + Q +++H YI+R    +  ++ NA++ +Y +CG++  SR +F+ +  KDV+SW ++I 
Sbjct: 427 LLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIM 486

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFN 494
            Y  +G    ALE+F  M    ++ +  T VS L+A S   +  +G  + N  ++++ + 
Sbjct: 487 GYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFN--LMQRDYG 544

Query: 495 LEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKVAIDL 550
           +   +     + D+  R G L    K    +  T    +W S++ A+    R +  ID+
Sbjct: 545 IIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTAS----RNRNDIDI 599



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 214/443 (48%), Gaps = 13/443 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV-LGISVDAFT 60
           Y K G V DAE++FD +  R + TWN+M+  YVSNG     L+ +  M   L +  D   
Sbjct: 153 YAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVG 212

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + AC +   L  G ++H  V++ G +    +  SL+ MY KC     A  +F  M 
Sbjct: 213 IIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMP 272

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  VV WN +I  Y+ +G   EA   F +M+  G      T +  L AC  +     G 
Sbjct: 273 SRT-VVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGR 331

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H    +S     V +  AL+ MY++ GK+  +  +  Q+ NK  VSWN+M+  ++  +
Sbjct: 332 SVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKE 391

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +Y +A+  F EL      PD       V A   LG L   +++H+Y ++  +  +  + N
Sbjct: 392 MYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTN 451

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            +M MYA+C  V    ++F +M  +D ISW TII GYA +     ALE+F  ++  GL  
Sbjct: 452 AVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQP 511

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG---LSDLVILNAIVDVYGKCGNIDYSRN 417
           +     SVL ACS +  M+    I   ++++    +  +     + D+ G+ G++   R 
Sbjct: 512 NESTFVSVLTACS-VSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDL---RE 567

Query: 418 VFESIESKDVVS----WTSMISS 436
           V + IES  +      W S++++
Sbjct: 568 VLKFIESIPITPTFRIWGSLLTA 590



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 142/280 (50%), Gaps = 14/280 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  AE +F  +  RTV TWN M+G Y  NG P    + + +M+  G  V+  T
Sbjct: 254 MYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVT 313

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA  +    G  +HG V +  +     +  +L+ MY+K    + +  +F +M 
Sbjct: 314 AINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMT 373

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  +V WN++I+AY       EA+ LF E+    L  + +T  A + A     F  LG+
Sbjct: 374 NKT-LVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPA-----FVLLGL 427

Query: 181 -----EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                ++H+  V+        V NA++ MYARCG +  +  +  ++  KD +SWN+++ G
Sbjct: 428 LRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMG 487

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQ---VCTVNAVSASG 272
           +  +     A++ F E++  G +P++   V  + A S SG
Sbjct: 488 YAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSG 527



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G V  +E +F +++ +T+ +WN M+ AY+        +  +  +    +  D FT
Sbjct: 355 MYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFT 414

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ A  +L  L    ++H  +++  Y     + N+++ MYA+C D   +R++FD+M 
Sbjct: 415 MSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMA 474

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG- 179
            K DV+ WN+II  Y+  GQ   AL +F EM+  GL  N  TFV+ L AC  S     G 
Sbjct: 475 GK-DVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGW 533

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
           ++ +      G   Q+     +  +  R G + E    +  +    +   W S+LT 
Sbjct: 534 IQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTA 590


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/746 (32%), Positives = 410/746 (54%), Gaps = 19/746 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGISVD 57
           +Y + G ++ A ++F+K+ +R + TW+ M+ A   +G   E L V   + R R    S +
Sbjct: 88  LYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTR--KNSPN 145

Query: 58  AFTFPCVIKACAMLKDLDCGAK-----IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
            +     I+AC+    LD   +     +   ++K  +D   ++   L+  Y K  +   A
Sbjct: 146 EYILSSFIQACS---GLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYA 202

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           R +FD + EK  V  W ++IS     G+   +L LF ++    +V + Y     L AC  
Sbjct: 203 RLVFDALPEKSTVT-WTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSI 261

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
             F   G +IHA  ++ G      + N LI  Y +CG++  A  +   + NK+ +SW ++
Sbjct: 262 LPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTL 321

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           L+G+ QN L+ +AM+ F  +   G KPD     + +++   L  L  G ++HAY IK   
Sbjct: 322 LSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANL 381

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK---ALEL 349
            +D  + N+L+DMYAKC C+    +VF    A D + +  +I GY++     +   AL +
Sbjct: 382 GNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNI 441

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGK 408
           F  ++   +   ++   S+L A + L  +  +K+IHG + + GL+ D+   +A++ VY  
Sbjct: 442 FHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSN 501

Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           C  +  SR VF+ ++ KD+V W SM S YV      EAL LF  +  +    D  T V  
Sbjct: 502 CYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDM 561

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           ++AA +L+ L+ G+E +  ++++G      + ++L+DMYA+CG+ + A+K F+   ++D+
Sbjct: 562 VTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDV 621

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
           + W S+I++   HG G+ A+ +  KM  E   P++ITF+ +L ACSH+GL+ +G K  E+
Sbjct: 622 VCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFEL 681

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           M   + ++P  EHY C+V LLGRA  L EA + +  M  +P A VW +LL  C    N E
Sbjct: 682 M-LRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
           L E  A+  +  DP + G++ L+SN++A+   W D ++VR RM+  G+ K PG SWIEI 
Sbjct: 741 LAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEIN 800

Query: 709 NKIHSFIARDKSHSESDEIYKKLAEI 734
            ++H F+++DKSH ++++IY+ L ++
Sbjct: 801 KEVHIFLSKDKSHCKANQIYEVLDDL 826



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 213/402 (52%), Gaps = 11/402 (2%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   + SG  L  Y++N L+ +Y+R G M  A  V  ++  ++ V+W++M++    +  
Sbjct: 66  VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125

Query: 242 YCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGK----ELHAYAIKQGFVSDL 296
           Y +++  F +  +     P++    + + A   L    +G+    +L ++ +K  F  D+
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDG--SGRWMVFQLQSFLVKSRFDRDV 183

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +G  L+D Y K   ++Y   VF  +  +  ++WTT+I+G  +      +L+LF  +   
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEG 243

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
            +  D  I+ +VL ACS L  +   K+IH +I+R G   D  ++N ++D Y KCG +  +
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAA 303

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
             +F+ + +K+++SWT+++S Y  N L  EA+ELF  M +  ++ D     S L++ +SL
Sbjct: 304 HKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASL 363

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
             L+ G +++ + I+     +  V +SL+DMYA+C  L  A KVF+     D++L+ +MI
Sbjct: 364 HALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMI 423

Query: 536 NAN---GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
                 G       A+++F+ M      P  +TF++LL A +
Sbjct: 424 EGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASA 465



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 164/302 (54%), Gaps = 4/302 (1%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           LL    +H   I  G   D  + N LM++Y++   + Y  +VF +M  ++ ++W+T+++ 
Sbjct: 60  LLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSA 119

Query: 337 YAQNNCHLKALELFRTV-QLEGLDADVMIIGSVLMACSGLKCMSQ--TKEIHGYIIRKGL 393
              +  + ++L +F    +      +  I+ S + ACSGL    +    ++  ++++   
Sbjct: 120 CNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRF 179

Query: 394 S-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
             D+ +   ++D Y K GNIDY+R VF+++  K  V+WT+MIS  V  G +  +L+LFY 
Sbjct: 180 DRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           + E NV  D   L + LSA S L  L+ GK+++  I+R G   + S+ + L+D Y +CG 
Sbjct: 240 LMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGR 299

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +  A+K+F+ +  K++I WT++++    +   K A++LF  M      PD     ++L +
Sbjct: 300 VRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTS 359

Query: 573 CS 574
           C+
Sbjct: 360 CA 361



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 161/341 (47%), Gaps = 42/341 (12%)

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVY 406
           E  R +QL  LD D ++  +V               +HG II  GL  D  + N ++++Y
Sbjct: 46  EFARLLQLRALD-DPLLYHNV---------------VHGQIIVSGLELDTYLSNILMNLY 89

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF--YLMNEANVESDSIT 464
            + G + Y+R VFE +  +++V+W++M+S+  H+G   E+L +F  +     N  ++ I 
Sbjct: 90  SRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYI- 148

Query: 465 LVSALSAASSLSILKKGK----ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           L S + A S L     G+    +L  F+++  F+ +  V + L+D Y + G +D A  VF
Sbjct: 149 LSSFIQACSGLD--GSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVF 206

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
           + +  K  + WT+MI+     GR  V++ LFY++   +  PD      +L ACS    + 
Sbjct: 207 DALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLE 266

Query: 581 EGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV--WCAL 637
            GK+    I+R  ++ D        L+D   +   +  A++    M   P   +  W  L
Sbjct: 267 GGKQIHAHILRYGHEKD--ASLMNVLIDSYVKCGRVRAAHKLFDGM---PNKNIISWTTL 321

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
           L   + +S       + K+ +EL    P  + L  ++FA S
Sbjct: 322 LSGYKQNS-------LHKEAMELFTSMP-KFGLKPDMFACS 354


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 264/806 (32%), Positives = 433/806 (53%), Gaps = 53/806 (6%)

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
           D      +H  +LK   + T  + N+L++ Y K   F  A +LF  +    +VV + ++I
Sbjct: 79  DTHLAKTVHATLLKRDEEDTH-LSNALISTYLKLNLFPHALRLFLSL-PSPNVVSYTTLI 136

Query: 133 SAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACED--SSFETLGMEIHAATVKS 189
           S  S   Q   AL LF  M  R  L  N YT+VA L AC      F   G+++HAA +K+
Sbjct: 137 SFLSKHRQH-HALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFH-FGLQLHAAALKT 194

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
                 +VANAL+++YA+      A  +  Q+  +D  SWN++++  +Q+ LY  A + F
Sbjct: 195 AHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLF 254

Query: 250 RELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           R +Q     + D       ++AS    +L+ G+++HA+A+K G  +DL +GN L+  Y+K
Sbjct: 255 RNMQATDAFRVDDFTLSILLTASA---SLMEGQQVHAHAVKLGLETDLNVGNGLIGFYSK 311

Query: 309 CCCVNYMGRVFYQMTAQDFISWT-------------------------------TIIAGY 337
              V+ +  +F  M  +D I+WT                               T++AG+
Sbjct: 312 FGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGF 371

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
            +N    +A+ LF  +  EGL+     + SV+ AC  L     +K++HG+ ++ G  S+ 
Sbjct: 372 CRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNG 431

Query: 397 VILNAIVDVYGKCGNIDYSRNVF--ESIESKDVVSWTSMISSYVHNGLANEALELFYL-M 453
            +  A++D+Y +CG +  +  +F    +E    V WT+MI  Y  NG   EA+ LF++  
Sbjct: 432 YVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGR 491

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIR--KGFNLEGSVASSLVDMYARCG 511
           ++  V  D +   S L    ++  L  GK+++  +I+   GFNLE  V +++V MY +CG
Sbjct: 492 SDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLE--VGNAVVSMYFKCG 549

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL- 570
           ++D A KVF  +   D++ W ++I+ N +H +G  A++++ +M  E   P+ +TF+ ++ 
Sbjct: 550 SVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIIS 609

Query: 571 -YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
            Y  ++  L+++ +     MR  YQ++P   HYA  + +LG    L+EA + + +M  +P
Sbjct: 610 AYRQTNLNLVDDCRNLFNSMRTVYQIEPTSRHYASFISVLGHWGLLQEALETINNMPFQP 669

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
           +A VW  LL  CR+H N+ +G+  A+ +L L+P +P  ++L+SN+++AS +W   E VR 
Sbjct: 670 SALVWRVLLDGCRLHKNELIGKWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVRE 729

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
            MR  G +K P  SWI    KI+SF  RD+SH +  +I + L EI      + GY   T 
Sbjct: 730 DMREKGFRKHPAQSWIVCEKKINSFYPRDRSHPQEKDIQRGL-EILILECLKIGYEPDTS 788

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
           FVLH VEE  K   L+ HS +LA  YG+L +  G  IRI KN+ +C DCH+F K  S + 
Sbjct: 789 FVLHEVEEHHKKIFLFHHSAKLAATYGILMTKPGKPIRIVKNILLCGDCHAFLKYASIVT 848

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
            R++ +RD++ FH F  G CSC D W
Sbjct: 849 KRDIFLRDSSGFHCFSNGQCSCKDCW 874



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 165/635 (25%), Positives = 298/635 (46%), Gaps = 56/635 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFT 60
           Y K      A +LF  +    V ++  ++ +++S       L  + RM     +  + +T
Sbjct: 108 YLKLNLFPHALRLFLSLPSPNVVSYTTLI-SFLSKHRQHHALHLFLRMTTRSHLPPNEYT 166

Query: 61  FPCVIKACA-MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +  V+ AC+ +L     G ++H   LK  +  + F+ N+LV++YAK   F  A +LF+++
Sbjct: 167 YVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQI 226

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETL 178
             + D+  WN+IISA         A  LFR MQ       + +T    L A   S+    
Sbjct: 227 -PRRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTA---SASLME 282

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE------------------------- 213
           G ++HA  VK G    + V N LI  Y++ G + +                         
Sbjct: 283 GQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYME 342

Query: 214 ------AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
                 A  V  ++  K+SVS+N++L GF +N+   +AM+ F  +   G +       + 
Sbjct: 343 FGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSV 402

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           V A G LG+    K++H +A+K GF S+  +   L+DMY +C  +   G++F +   ++F
Sbjct: 403 VDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEF 462

Query: 328 IS--WTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEI 384
            S  WT +I GYA+N    +A+ LF   + +G +  D +   S+L  C  +  +   K+I
Sbjct: 463 SSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQI 522

Query: 385 HGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           H ++I+ GL  +L + NA+V +Y KCG++D +  VF  +   D+V+W ++IS  + +   
Sbjct: 523 HCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQG 582

Query: 444 NEALELFYLMNEANVESDSITLVSALSA--ASSLSILKKGKELNGFIIRKGFNLEGSVA- 500
           + ALE++  M    ++ + +T V  +SA   ++L+++   + L    +R  + +E +   
Sbjct: 583 DRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFN-SMRTVYQIEPTSRH 641

Query: 501 -SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR---GKVAIDLFYKME 555
            +S + +    G L  A +  N +      ++W  +++   LH     GK A      +E
Sbjct: 642 YASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQNILALE 701

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
            +    D  TF+ +    S SG  +  +   E MR
Sbjct: 702 PK----DPSTFILVSNLYSASGRWDRSEMVREDMR 732



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 224/474 (47%), Gaps = 42/474 (8%)

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           L   +++ + AL     S    L   +HA  +K  +    +++NALI+ Y +      A 
Sbjct: 60  LPPESHSLLHALHVSSRSGDTHLAKTVHATLLKRDEE-DTHLSNALISTYLKLNLFPHAL 118

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA-SGRL 274
            +   L + + VS+ ++++   ++  +     F R    +   P++   V  ++A S  L
Sbjct: 119 RLFLSLPSPNVVSYTTLISFLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLL 178

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
            +   G +LHA A+K        + N L+ +YAK    +   ++F Q+  +D  SW TII
Sbjct: 179 HHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTII 238

Query: 335 AGYAQNNCHLKALELFRTVQ-LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           +   Q++ +  A  LFR +Q  +    D   +  +L A + L    + +++H + ++ GL
Sbjct: 239 SAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASLM---EGQQVHAHAVKLGL 295

Query: 394 -SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN-------- 444
            +DL + N ++  Y K GN+D    +FE +  +DV++WT M+++Y+  GL N        
Sbjct: 296 ETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDE 355

Query: 445 -----------------------EALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
                                  EA+ LF  M E  +E    +L S + A   L   K  
Sbjct: 356 MPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVS 415

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL--ILWTSMINANG 539
           K+++GF ++ GF   G V ++L+DMY RCG +  A K+F   + ++   ++WT+MI    
Sbjct: 416 KQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYA 475

Query: 540 LHGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACSHSGLINEGKKF-LEIMRC 591
            +G+ + AI LF+   ++     D +   ++L  C   G ++ GK+    +++C
Sbjct: 476 RNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKC 529



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 210/483 (43%), Gaps = 66/483 (13%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           +Y K  S   A +LF+++ +R + +WN ++ A + +         +  M+      VD F
Sbjct: 209 LYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDF 268

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++ A A L +   G ++H   +K G ++   + N L+  Y+K  +      LF+ M
Sbjct: 269 TLSILLTASASLME---GQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGM 325

Query: 120 GEKEDVVLWNSIISAYSASG-------------------------------QCLEALGLF 148
             + DV+ W  +++AY   G                               Q  EA+ LF
Sbjct: 326 RVR-DVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLF 384

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
             M   GL    ++  + + AC       +  ++H   VK G     YV  AL+ MY RC
Sbjct: 385 VRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRC 444

Query: 209 GKMTEAAGVL--YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK-PDQVCTV 265
           G+M +A  +   ++LE   SV W +M+ G+ +N    +A+  F   +  G+   D+V   
Sbjct: 445 GRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAA 504

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           + +   G +G+L  GK++H + IK G   +L++GN ++ MY KC  V+   +VF  M   
Sbjct: 505 SMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCT 564

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           D ++W T+I+G   +    +ALE++  +  EG+  + +    ++ A        QT    
Sbjct: 565 DIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISA------YRQTN--- 615

Query: 386 GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
                        LN + D    C N+  S      IE      + S IS   H GL  E
Sbjct: 616 -------------LNLVDD----CRNLFNSMRTVYQIEPTS-RHYASFISVLGHWGLLQE 657

Query: 446 ALE 448
           ALE
Sbjct: 658 ALE 660


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/659 (35%), Positives = 373/659 (56%), Gaps = 43/659 (6%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA            V   LI+       +  A  +    ++ +   +N+++ G  +N 
Sbjct: 58  QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +  ++  F  +     +PD++     + +   L ++  G+ LH   +K G   D  +  
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177

Query: 301 TLMDMYAKCCCVNYMGRVFYQMT----AQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
           +L+DMY K   + +  ++F +      A+  + W  +I G  +                 
Sbjct: 178 SLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCK----------------- 220

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
                   +G +  A S  + M +         R   S     N++++ + + G++D +R
Sbjct: 221 --------VGDLSKAASLFEAMPE---------RNAGS----WNSLINGFVRNGDLDRAR 259

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            +F  +  K+VVSWT+MI+ +  NG   +AL +F+ M E  V  + +T+VSAL A + + 
Sbjct: 260 ELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIG 319

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L+ G+ ++ ++   GF L   + ++LVDMYA+CG +  A++VF   + KDL+ W+ MI 
Sbjct: 320 ALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIW 379

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
              +HG    A+  F KM++    PD + FLA+L ACSHSG +++G  F E MR DY ++
Sbjct: 380 GWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIE 439

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  +HY  +VDLLGRA  L+EA  F++SM I P   +W AL  ACR H N E+ E+ A+K
Sbjct: 440 PTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEK 499

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           LL+L+P +PG+YV +SNV+AA  +W+DVE+VR  M+  G++K PG S+IE+  ++HSF+A
Sbjct: 500 LLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVA 559

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            D +H  ++EI  KL EIT   ++E GY+ +T +VLHN+EEEEK   L  HSE+LA+A+G
Sbjct: 560 GDHAHVRAEEISLKLEEITASAKQE-GYMPETAWVLHNIEEEEKEDALGSHSEKLALAFG 618

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ +  GS IRI KNLRVC DCHS  K  S+L  RE+++RD  RFHHF+ G CSCGDYW
Sbjct: 619 LISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 195/433 (45%), Gaps = 51/433 (11%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F       +F +NA++     N      +  +  M  L I  D  T P V+K+ A 
Sbjct: 91  ALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAA 150

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK---EDVVL 127
           L D+  G  +HG V+K G +   F+  SLV MY K  +     QLFD   ++   E ++L
Sbjct: 151 LVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILL 210

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           WN +I+     G   +A  LF  M       NA ++                        
Sbjct: 211 WNVLINGCCKVGDLSKAASLFEAMPE----RNAGSW------------------------ 242

Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
                      N+LI  + R G +  A  +  Q+  K+ VSW +M+ GF QN  + KA+ 
Sbjct: 243 -----------NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALS 291

Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
            F  +   G +P+ +  V+A+ A  ++G L  G+ +H Y    GF  +  IG  L+DMYA
Sbjct: 292 MFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYA 351

Query: 308 KCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
           KC  +    RVF +   +D ++W+ +I G+A + C  +AL+ F  ++  G++ D +I  +
Sbjct: 352 KCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLA 411

Query: 368 VLMACSGLKCMSQTKEIH-----GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
           +L ACS    + Q           Y I   +    +   IVD+ G+ G +D + +  +S+
Sbjct: 412 ILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTL---IVDLLGRAGRLDEALSFIQSM 468

Query: 423 E-SKDVVSWTSMI 434
             + D V W ++ 
Sbjct: 469 PINPDFVIWGALF 481



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 156/371 (42%), Gaps = 63/371 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR----TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV 56
           MY K G +    QLFD+  QR    ++  WN +                           
Sbjct: 182 MYVKIGELGFGLQLFDESPQRNKAESILLWNVL--------------------------- 214

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
                   I  C  + DL   A +   + +    S     NSL+  + +  D  +AR+LF
Sbjct: 215 --------INGCCKVGDLSKAASLFEAMPERNAGSW----NSLINGFVRNGDLDRARELF 262

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
            +M EK +VV W ++I+ +S +G   +AL +F  M   G+  N  T V+AL AC      
Sbjct: 263 VQMPEK-NVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGAL 321

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            +G  IH     +G  L   +  AL+ MYA+CG +  A+ V  + + KD ++W+ M+ G+
Sbjct: 322 QVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGW 381

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             +  + +A+Q F +++ AG  PD+V  +  ++A    GN+  G         +    D 
Sbjct: 382 AIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFF-----ESMRLDY 436

Query: 297 QIGNTLMDMYAKCCCVNYMGRV--------FYQMTA--QDFISWTTII-AGYAQNNCHLK 345
            I  T   M      V+ +GR         F Q      DF+ W  +  A  A  N  + 
Sbjct: 437 SIEPT---MKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMA 493

Query: 346 ALELFRTVQLE 356
            L   + +QLE
Sbjct: 494 ELTAEKLLQLE 504



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 5/183 (2%)

Query: 378 MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           + Q  +IH  I    L S+  ++  ++       ++DY+ ++F   +  ++  + ++I  
Sbjct: 53  LPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRG 112

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
              N     ++  F LM   ++  D +TL   L + ++L  +  G+ L+G +++ G   +
Sbjct: 113 LAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFD 172

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKD----LILWTSMINANGLHGRGKVAIDLFY 552
             V  SLVDMY + G L    ++F+    ++    ++LW  +IN     G    A  LF 
Sbjct: 173 SFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFE 232

Query: 553 KME 555
            M 
Sbjct: 233 AMP 235


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/618 (35%), Positives = 362/618 (58%), Gaps = 10/618 (1%)

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           N  S  WN+ L    +   + +A+  + ++   G +P+      A+ +   L   + G +
Sbjct: 2   NALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQ 61

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ--MTAQDFISWTTIIAGYAQN 340
            H    K G V +  +   L+ MY K   V+   +VF +   + +  + +  +++GY  N
Sbjct: 62  FHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSN 121

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
           +    A+ LFR +  EG+  + + +  ++ AC     +     +H   ++ G  SD+ ++
Sbjct: 122 SKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVV 181

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           N  + +Y KCG+++Y++ +F+ +  K ++SW +M+S Y  NGLA   LEL+  M+   V 
Sbjct: 182 NCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVH 241

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            D +TLV  LS+ ++L     G E+   +   GF     + ++L++MYARCG L  A  V
Sbjct: 242 PDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAV 301

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F+ +  + L+ WT++I   G+HG G++A+ LF +M      PD   F+ +L ACSH+GL 
Sbjct: 302 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLT 361

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
           ++G ++ ++M+ +YQL+P PEHY+C+VDLLGRA  L+EA   + SM I+P   VW ALLG
Sbjct: 362 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 421

Query: 640 ACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           AC++H N EL E+  ++++EL+P N G YVL+SN+++ +   K V ++R+ M+   LKK 
Sbjct: 422 ACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKD 481

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG S++E+  ++H FI  D++H +SDEIY+ L E+   + +E G   +      N EE  
Sbjct: 482 PGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD-----NREESN 536

Query: 760 K--VQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           K     +  HSE+LA+A+G+L +T G+ + I KNLR+C DCH F K+VS++  R+L VRD
Sbjct: 537 KDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRD 596

Query: 818 ANRFHHFEAGVCSCGDYW 835
           A RFHHF  G CSC DYW
Sbjct: 597 ATRFHHFRNGSCSCKDYW 614



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 203/419 (48%), Gaps = 10/419 (2%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
            WN  L       + L+ L  Y +M   G   +AFTFP  +K+CA L     G++ HG +
Sbjct: 7   PWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQI 66

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR-MGEKEDVVLWNSIISAYSASGQCLE 143
            K G     F+   L++MY K      AR++F+     ++  V +N+++S Y ++ +C +
Sbjct: 67  TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
           A+ LFR+M   G+  N+ T +  + AC       LG  +H +T+K G +  V V N  I 
Sbjct: 127 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 186

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           MY +CG +  A  +  ++  K  +SWN+M++G+ QN L    ++ +R +   G  PD V 
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 246

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
            V  +S+   LG    G E+       GF S+  + N L++MYA+C  +     VF  M 
Sbjct: 247 LVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 306

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
            +  +SWT II GY  +     A++LF+ +   G++ D      VL ACS      Q  E
Sbjct: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 366

Query: 384 I-----HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
                   Y +  G       + +VD+ G+ G +  ++ + ES+  K D   W +++ +
Sbjct: 367 YFKMMKRNYQLEPGPEH---YSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 422



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 182/366 (49%), Gaps = 11/366 (3%)

Query: 1   MYGKCGSVLDAEQLFDKV--SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY K   V +A ++F++   S++    +NA++  YVSN +    +  + +M   G+ V++
Sbjct: 84  MYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNS 143

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            T   +I AC    +L+ G+ +H   LK G+DS   +VN  + MY KC     A++LFD 
Sbjct: 144 VTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDE 203

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K  ++ WN+++S Y+ +G     L L+R M   G+  +  T V  L +C +   +++
Sbjct: 204 MPVK-GLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSV 262

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G E+      SG     ++ NALI MYARCG +T+A  V   +  +  VSW +++ G+  
Sbjct: 263 GHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGM 322

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A+Q F+E+  +G +PD    V  +SA    G    G E +   +K+ +   L+ 
Sbjct: 323 HGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE-YFKMMKRNY--QLEP 379

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G    + Y+  C V+ +GR      AQ  I    I    A     L A ++ + V+L  L
Sbjct: 380 GP---EHYS--CMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAEL 434

Query: 359 DADVMI 364
             + +I
Sbjct: 435 AFERVI 440


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/656 (34%), Positives = 366/656 (55%), Gaps = 35/656 (5%)

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V   ++  + + WN+M+ G   +     ++  +  +   G  P+       + +  +
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK-----------------------CC 310
                 G+++H   +K GF  DL +  +L+ MY +                         
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 311 CVNYMGR--------VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
              Y  R        +F ++  +D +SW  +I+GYA+  C+ +ALELF  +    +  D 
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFES 421
               +VL AC+    +   +++H ++   G  S+L I+NA++D+Y KCG ++ +  +F+ 
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  KDV+SW ++I  Y H  L  EAL LF  M  +    + +T++S L A + L  +  G
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316

Query: 482 KELNGFIIR--KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           + ++ +I +  KG     S+ +SL+DMYA+CG ++ A++VFN +  K L  W +MI    
Sbjct: 317 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 376

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HGR   + DLF +M      PD ITF+ LL ACSHSG+++ G+     M  DY++ P  
Sbjct: 377 MHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKL 436

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C++DLLG +   +EA + + +M++EP   +WC+LL AC++H N EL E  A+ L++
Sbjct: 437 EHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIK 496

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           ++P NP +Y+L+SN++A++ +W+DV ++R  + G  +KK PG S IE+ + +  F+  DK
Sbjct: 497 IEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDK 556

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H ++ EIY    E  E L  E G+V  T  VL  +EEE K   L  HSE+LAIA+G++ 
Sbjct: 557 FHPQNREIYGM-LEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 615

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +  G+ + I KNLRVC +CH   KL+S+++ RE+V RD  RFHHF  GVCSC DYW
Sbjct: 616 TKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 257/501 (51%), Gaps = 44/501 (8%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A  +F+ + E   ++ WN++I  ++ S   + +L L+  M  +GL+ N+YTF   L++C 
Sbjct: 17  ATSVFETIQEPNQLI-WNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCA 75

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMY-------------------------- 205
            S   T G +IH   +K G +L +YV  +LI+MY                          
Sbjct: 76  KSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTA 135

Query: 206 -----ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
                A  G +  A  +  ++  KD VSWN+M++G+ +   Y +A++ F E+     +PD
Sbjct: 136 LITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPD 195

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
           +   V  +SA    G++  G+++H++    GF S+L+I N L+D+Y+KC  V     +F 
Sbjct: 196 ESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
            ++ +D ISW T+I GY   N + +AL LF+ +   G   + + + SVL AC+ L  +  
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDI 315

Query: 381 TKEIHGYIIR--KGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
            + IH YI +  KG+++   L  +++D+Y KCG+I+ +  VF S+  K + SW +MI  +
Sbjct: 316 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 375

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             +G A+ + +LF  M +  +E D IT V  LSA S   +L  G+ +   + +  + +  
Sbjct: 376 AMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQD-YKMTP 434

Query: 498 SVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDL---F 551
            +     ++D+    G    A ++ N ++ + D ++W S++ A  +HG  ++A       
Sbjct: 435 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNL 494

Query: 552 YKMEAESFAPDHITFLALLYA 572
            K+E E+  P     L+ +YA
Sbjct: 495 IKIEPEN--PSSYILLSNIYA 513



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 236/499 (47%), Gaps = 76/499 (15%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F+ + +     WN M+  +  + +P+  L  Y  M  LG+  +++TFP ++K+CA 
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY----------------------- 107
            K    G +IHG VLK G+D   ++  SL++MY + +                       
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 108 --------DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN 159
                   D R A++LFD +  K DVV WN++IS Y+ +G   EAL LF EM ++ +  +
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVK-DVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPD 195

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
             T+V  L AC  S    LG ++H+     G +  + + NALI +Y++CG++  A G+  
Sbjct: 196 ESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
            L  KD +SWN+++ G+   +LY +A+  F+E+  +G+ P+ V  ++ + A   LG +  
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDI 315

Query: 280 GKELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
           G+ +H Y  K  +G  +   +  +L+DMYAKC  +    +VF  M  +   SW  +I G+
Sbjct: 316 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 375

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV 397
           A +     + +LF  ++  G++ D +    +L ACS                        
Sbjct: 376 AMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACS------------------------ 411

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIE-----SKDVVSWTSMISSYVHNGLANEALELFYL 452
                       G +D  R++F S+      +  +  +  MI    H+GL  EA E   +
Sbjct: 412 ----------HSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE---M 458

Query: 453 MNEANVESDSITLVSALSA 471
           +N   +E D +   S L A
Sbjct: 459 INTMEMEPDGVIWCSLLKA 477



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 3/284 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A++LFD++  + V +WNAM+  Y   G     LE +  M  + +  D  T+
Sbjct: 140 YASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTY 199

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA    ++ G ++H  V   G+DS   IVN+L+ +Y+KC +   A  LF  +  
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSY 259

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN++I  Y+      EAL LF+EM R G   N  T ++ L AC       +G  
Sbjct: 260 K-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRW 318

Query: 182 IHAATVK--SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           IH    K   G      +  +LI MYA+CG +  A  V   + +K   SWN+M+ GF  +
Sbjct: 319 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMH 378

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
                +   F  ++  G +PD +  V  +SA    G L  G+ +
Sbjct: 379 GRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHI 422



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 174/366 (47%), Gaps = 34/366 (9%)

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           + Y   VF  +   + + W T+I G+A ++  + +L L+  +   GL  +      +L +
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73

Query: 372 CSGLKCMSQTKEIHGYIIRKGLS--------------------------------DLVIL 399
           C+  K  ++ ++IHG +++ G                                  D+V  
Sbjct: 74  CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
            A++  Y   G+I  ++ +F+ I  KDVVSW +MIS Y   G   EALELF  M + NV 
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            D  T V+ LSA +    ++ G++++ ++   GF+    + ++L+D+Y++CG ++ A  +
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  +  KD+I W ++I         K A+ LF +M      P+ +T L++L AC+H G I
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313

Query: 580 NEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           + G+   + I +    +         L+D+  +   +E A+Q   SM +  +   W A++
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMI 372

Query: 639 GACRVH 644
               +H
Sbjct: 373 FGFAMH 378



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 130/295 (44%), Gaps = 17/295 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  LF  +S + V +WN ++G Y         L  +  M   G + +  T
Sbjct: 240 LYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 299

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              V+ ACA L  +D G  IH  + K   G  +   +  SL+ MYAKC D   A Q+F+ 
Sbjct: 300 MLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 359

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K  +  WN++I  ++  G+   +  LF  M+++G+  +  TFV  L AC  S    L
Sbjct: 360 MLHKS-LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDL 418

Query: 179 GMEIHAATV---KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
           G  I  +     K    L+ Y    +I +    G   EA  ++  +E   D V W S+L 
Sbjct: 419 GRHIFRSMTQDYKMTPKLEHY--GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLK 476

Query: 235 GFVQNDLYCKAMQFFREL-QGAGQKPDQVCTVNAVSAS-------GRLGNLLNGK 281
               +     A  F + L +   + P     ++ + AS        R+  LLNGK
Sbjct: 477 ACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGK 531


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/638 (35%), Positives = 370/638 (57%), Gaps = 4/638 (0%)

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           +++ Y++ G +        ++   D VSWN+++  ++ N  + +   FFR +   G  P 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
           +V     +SA      +  G+ +    +  G   +  +   L+ MY K         VF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
           +M+ +D ++W+ ++A YA+N    +AL LFR + L+G+  + + + S L AC+ L  +  
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 381 TKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
              +H  +  +G+ S +V+  A+V++YGKCG I+ +   F  I  K+VV+W+++ ++Y  
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           N    +A+ + + M+   +  +S T VS L A ++++ LK+G+ ++      G  LE  V
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300

Query: 500 --ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
              ++LV+MY++CG L +A  +F+ +   DL+LW S+I  N  HG+ + A++LF +M  E
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              P  ITF ++L+ACSH+G++++G+K       D+ + P  EH+ C+VDLLGRA  + +
Sbjct: 361 GLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVD 420

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           +   +  M  EP    W A LGACR + N +     A+ L +LDP     YVL+SN++A 
Sbjct: 421 SEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAK 480

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           + +W DV ++R  M+     K  G SWIE+ +++H FI+ D  H    EI+ +L  +T K
Sbjct: 481 AGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLT-K 539

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVD 797
           L +E GYV  T+ VLH+V++E K  M+  HSE+LA+A+ +L + EGS IR+ KNLRVC D
Sbjct: 540 LMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCND 599

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CH+  K +S+L  RE+VVRD NRFH F+ G CSCGDYW
Sbjct: 600 CHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 211/440 (47%), Gaps = 6/440 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G++    + FD++    + +WNA++ AY+ N +  R    +  M + GI+      
Sbjct: 5   YSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGI 64

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              + AC   +++  G  I   +L  G +    +  +LV+MY K      A  +F RM  
Sbjct: 65  SIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSH 124

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV W+++++AY+ +G   EALGLFR+M   G+  N  T V+ L AC        G  
Sbjct: 125 R-DVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGAL 183

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H      G    V V  AL+ +Y +CG++  A     Q+  K+ V+W+++   + +ND 
Sbjct: 184 MHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDR 243

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH--AYAIKQGFVSDLQIG 299
              A++    +   G  P+    V+ + A   +  L  G+ +H     +  G  SD+ + 
Sbjct: 244 NRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVL 303

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             L++MY+KC  +   G +F ++   D + W ++IA  AQ+    KALELF  ++LEGL 
Sbjct: 304 TALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQ 363

Query: 360 ADVMIIGSVLMACSGLKCMSQ-TKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             ++   SVL ACS    + Q  K    +I   G+  +      +VD+ G+ G I  S +
Sbjct: 364 PTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSED 423

Query: 418 VFESIE-SKDVVSWTSMISS 436
           +   +      V+W + + +
Sbjct: 424 LLLHMPFEPHPVAWMAFLGA 443



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 11/330 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGK G   DA  +F ++S R V  W+AM+ AY  NG P   L  + +M + G++ +  T
Sbjct: 105 MYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVT 164

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + ACA L DL  GA +H  V   G  S   +  +LV +Y KC     A + F ++ 
Sbjct: 165 LVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIV 224

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK +VV W++I +AY+ + +  +A+ +   M   GLV N+ TFV+ L AC   +    G 
Sbjct: 225 EK-NVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGR 283

Query: 181 EIHAATVKSGQNLQ--VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            IH  T   G  L+  VYV  AL+ MY++CG +  A  +  ++ + D V WNS++    Q
Sbjct: 284 RIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQ 343

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +    KA++ F  ++  G +P  +   + + A    G L  G        ++ FVS +  
Sbjct: 344 HGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQG--------RKHFVSFIGD 395

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
                +     C V+ +GR  + + ++D +
Sbjct: 396 HGIFPEAEHFGCMVDLLGRAGWIVDSEDLL 425


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/652 (35%), Positives = 370/652 (56%), Gaps = 39/652 (5%)

Query: 220 QLENKDSVSWNSMLTGFVQNDLYC---KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
            L  KD VS ++     V  D+ C   +  +    L     +P        ++A  R   
Sbjct: 45  HLNPKDLVSEDNKFEEAV--DVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRA 102

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC------------------CCVNYM--- 315
           L  G+ +HA+     FV  + I N L+DMYAKC                  C  N M   
Sbjct: 103 LELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVG 162

Query: 316 ----GR------VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL-EGLDADVMI 364
               GR      +F +M  +D  SW   I+GY  +N   +ALELFR +Q  E   ++   
Sbjct: 163 YAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFT 222

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + S L A + + C+   KEIHGY+IR  L+ D V+ +A++D+YGKCG++D +R +F+ ++
Sbjct: 223 LSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMK 282

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            +DVVSWT+MI     +G   E   LF  + ++ V  +  T    L+A +  +    GKE
Sbjct: 283 DRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKE 342

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++G+++  G++      S+LV MY++CG   +A +VFN +   DL+ WTS+I     +G+
Sbjct: 343 VHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQ 402

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
              A+  F  +      PD +T++ +L AC+H+GL+++G ++   ++  + L    +HYA
Sbjct: 403 PDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 462

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C++DLL R+   +EA   + +M ++P   +W +LLG CR+H N EL +  AK L E++P 
Sbjct: 463 CVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPE 522

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           NP  Y+ ++N++A +  W +V  VR  M   G+ K PG SWIEI  ++H F+  D SH +
Sbjct: 523 NPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPK 582

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
           + +I++ L E+++K++ E GYV  T FVLH+VEEE+K Q L  HSE+LA+ +G++ +  G
Sbjct: 583 TSDIHEFLGELSKKIKEE-GYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPG 641

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + I++ KNLR CVDCH+  K +S++  R++ VRD+NRFH FE G CSC DYW
Sbjct: 642 TPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 221/469 (47%), Gaps = 42/469 (8%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG- 209
           + R     +A  +   + AC       LG  +HA T  S     V+++N L+ MYA+CG 
Sbjct: 78  LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGS 137

Query: 210 ------------------------------KMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                                         ++ +A  +  ++  +D+ SWN+ ++G+V +
Sbjct: 138 LVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTH 197

Query: 240 DLYCKAMQFFRELQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +   +A++ FR +Q   +   ++    +A++AS  +  L  GKE+H Y I+     D  +
Sbjct: 198 NQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVV 257

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            + L+D+Y KC  ++    +F QM  +D +SWTT+I    ++    +   LFR +   G+
Sbjct: 258 WSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGV 317

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRN 417
             +      VL AC+        KE+HGY++  G       ++A+V +Y KCGN   +R 
Sbjct: 318 RPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARR 377

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  +   D+VSWTS+I  Y  NG  +EAL  F L+ ++  + D +T V  LSA +   +
Sbjct: 378 VFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGL 437

Query: 478 LKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           + KG E    I  K G        + ++D+ AR G    A  + + +  K D  LW S++
Sbjct: 438 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLL 497

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
               +HG     K A    Y++E E+ A    T++ L    +++GL +E
Sbjct: 498 GGCRIHGNLELAKRAAKALYEIEPENPA----TYITLANIYANAGLWSE 542



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 172/338 (50%), Gaps = 4/338 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFT 60
           Y K G +  A +LFD++ QR  F+WNA +  YV++ +P   LE +  M R    S + FT
Sbjct: 163 YAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFT 222

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + A A +  L  G +IHG +++   +  + + ++L+ +Y KC    +AR +FD+M 
Sbjct: 223 LSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMK 282

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ DVV W ++I      G+  E   LFR++ + G+  N YTF   L AC D + E LG 
Sbjct: 283 DR-DVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGK 341

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   + +G +   +  +AL+ MY++CG    A  V  ++   D VSW S++ G+ QN 
Sbjct: 342 EVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNG 401

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIG 299
              +A+ FF  L  +G KPDQV  V  +SA    G +  G E  H+   K G +      
Sbjct: 402 QPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 461

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG 336
             ++D+ A+         +   M  + D   W +++ G
Sbjct: 462 ACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGG 499



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 216/497 (43%), Gaps = 51/497 (10%)

Query: 41  RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV 100
           RV E    +        A  +  +I AC   + L+ G ++H       +    FI N L+
Sbjct: 70  RVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLL 129

Query: 101 AMYAKCYDFRKARQLFDRMGEKE------------------------------DVVLWNS 130
            MYAKC     A+ LFD MG ++                              D   WN+
Sbjct: 130 DMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNA 189

Query: 131 IISAYSASGQCLEALGLFREMQRVGL-VTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
            IS Y    Q  EAL LFR MQR     +N +T  +AL A        LG EIH   +++
Sbjct: 190 AISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRT 249

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
             NL   V +AL+ +Y +CG + EA G+  Q++++D VSW +M+    ++    +    F
Sbjct: 250 ELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLF 309

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           R+L  +G +P++      ++A         GKE+H Y +  G+       + L+ MY+KC
Sbjct: 310 RDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKC 369

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
                  RVF +M   D +SWT++I GYAQN    +AL  F  +   G   D +    VL
Sbjct: 370 GNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVL 429

Query: 370 MACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            AC+       GL+     KE HG +        VI     D+  + G    + N+ +++
Sbjct: 430 SACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI-----DLLARSGRFKEAENIIDNM 484

Query: 423 ESK-DVVSWTSMISSYVHNG---LANEALELFYLMNEANVESDSITLVSALSAA---SSL 475
             K D   W S++     +G   LA  A +  Y +   N  +  ITL +  + A   S +
Sbjct: 485 PVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPEN-PATYITLANIYANAGLWSEV 543

Query: 476 SILKKGKELNGFIIRKG 492
           + ++K  +  G + + G
Sbjct: 544 ANVRKDMDNMGIVKKPG 560



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGKCGS+ +A  +FD++  R V +W  M+     +G        +  +   G+  + +T
Sbjct: 264 LYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYT 323

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ ACA       G ++HG ++  GYD   F +++LV MY+KC + R AR++F+ M 
Sbjct: 324 FAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEM- 382

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D+V W S+I  Y+ +GQ  EAL  F  + + G   +  T+V  L AC  +     G+
Sbjct: 383 HQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGL 442

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLTG 235
           E  H+   K G          +I + AR G+  EA  ++  +  K D   W S+L G
Sbjct: 443 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGG 499


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 249/719 (34%), Positives = 403/719 (56%), Gaps = 36/719 (5%)

Query: 137 ASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN--L 193
           + G   EAL LF  +     LV + +T+ A  QAC   S    G  +H        N   
Sbjct: 39  SRGHLQEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDF 98

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            +++ N ++ MYA+CG +  A  +  ++  K+ VSW ++++G+ Q+    ++ + FR  +
Sbjct: 99  NLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHG---RSNECFRVFR 155

Query: 254 GA--GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           G     +P +    + +SA G  G+   G+++HA A+K  F S + +GN L+ MY K C 
Sbjct: 156 GMLIWHQPTEFAFASVISACG--GDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCG 213

Query: 312 -VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
             +    V+  M  ++ +SW ++IAG+    C  +ALELF  + + G+  D   + S+  
Sbjct: 214 GADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIF- 272

Query: 371 AC-----SGLKCMSQTKEIH---GYIIRKGLSDLVILNAIVDVYGKCGN--IDYSRNVFE 420
           +C      GL+C  Q + +    G+I++     + +  A+V  Y   G    D  R   E
Sbjct: 273 SCLCGMGDGLECCFQLQCLTIKTGFILK-----IEVATALVKAYSSLGGEVSDCYRIFLE 327

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
               +DVVSWT +I+++       +AL +F       +  D       L A + L+  + 
Sbjct: 328 LDGRQDVVSWTGIIAAFAERD-PKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERH 386

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
              +   +++ GF  +  +A++L+   ARCG++ ++ +VF+ + ++D + W SM+ A  +
Sbjct: 387 ALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAM 446

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG+GK A+ LF +M+A+   PD  TF+ALL ACSH+G+  EG K  E M  ++ + P  +
Sbjct: 447 HGQGKEALLLFSQMDAQ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLD 503

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HYAC+VD+LGRA  + EA + +  M +EP + VW ALLG+CR H   +L ++ A KL EL
Sbjct: 504 HYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKEL 563

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP N   YVL+SN+F    ++ +   +R  M G  ++K PG SWIE+GN++H F +  + 
Sbjct: 564 DPNNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQ 623

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK- 779
           H E + I  +L E+  +L ++ GYV Q    LH++E+E K + LY HSE+LA+A+ ++  
Sbjct: 624 HPEKEAICARLEELVRRL-KDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNV 682

Query: 780 ---STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
                 G+ I+I KN+R+CVDCH+F KL S L   E+VVRD+NRFHHF+A VCSC DYW
Sbjct: 683 GSICCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/501 (29%), Positives = 252/501 (50%), Gaps = 25/501 (4%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHG--LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           T+  + +ACA    L  G  +H    +     D   F+ N +V MYAKC     A Q+FD
Sbjct: 65  TYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFD 124

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            M EK ++V W +++S Y+  G+  E   +FR M  +      + F + + AC     + 
Sbjct: 125 EMPEK-NIVSWTALVSGYAQHGRSNECFRVFRGM-LIWHQPTEFAFASVISACGGD--DN 180

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYAR-CGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            G ++HA  +K+  +  VYV NALI MY + CG   EA  V   +  ++ VSWNSM+ GF
Sbjct: 181 CGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGF 240

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSD 295
                  +A++ F ++   G + D+   V+  S    +G+ L    +L    IK GF+  
Sbjct: 241 QVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILK 300

Query: 296 LQIGNTLMDMYAKCCC-VNYMGRVFYQMTA-QDFISWTTIIAGYAQNNCHLKALELFRTV 353
           +++   L+  Y+     V+   R+F ++   QD +SWT IIA +A+ +   KAL +FR  
Sbjct: 301 IEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERDPK-KALVIFRQF 359

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNI 412
             E L  D  +   VL AC+GL        +  ++++ G  D ++L NA++    +CG++
Sbjct: 360 LRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSV 419

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             S+ VF+ + S+D VSW SM+ +Y  +G   EAL LF  M   + + D  T V+ LSA 
Sbjct: 420 ALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSAC 476

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA-----SSLVDMYARCGALDIANKVFNCVQTK- 526
           S   + ++G +    I     N  G V      + +VD+  R G +  A ++ + +  + 
Sbjct: 477 SHAGMAEEGAK----IFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEP 532

Query: 527 DLILWTSMINANGLHGRGKVA 547
           D ++W++++ +   HG  K+A
Sbjct: 533 DSVVWSALLGSCRKHGETKLA 553



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 216/453 (47%), Gaps = 25/453 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+  A Q+FD++ ++ + +W A++  Y  +G        +  M +     + F 
Sbjct: 109 MYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWHQPTE-FA 167

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK-CYDFRKARQLFDRM 119
           F  VI AC    D +CG ++H L LK  +DS  ++ N+L+ MY K C    +A  +++ M
Sbjct: 168 FASVISACG--GDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAM 225

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA-CEDSSFETL 178
           G + ++V WNS+I+ +   G    AL LF +M   G+  +  T V+     C        
Sbjct: 226 GFR-NLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLEC 284

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARC-GKMTEAAGVLYQLENK-DSVSWNSMLTGF 236
             ++   T+K+G  L++ VA AL+  Y+   G++++   +  +L+ + D VSW  ++  F
Sbjct: 285 CFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAF 344

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
            + D   KA+  FR+       PD+      + A   L    +   + ++ +K GF  D+
Sbjct: 345 AERDPK-KALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDI 403

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            + N L+   A+C  V    +VF +M ++D +SW +++  YA +    +AL LF  +  +
Sbjct: 404 VLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDAQ 463

Query: 357 GLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKC 409
               D     ++L ACS       G K        HG +       L     +VD+ G+ 
Sbjct: 464 ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIV-----PQLDHYACMVDILGRA 515

Query: 410 GNIDYSRNVFESIE-SKDVVSWTSMISSYVHNG 441
           G I  ++ + + +    D V W++++ S   +G
Sbjct: 516 GQISEAKELIDKMPMEPDSVVWSALLGSCRKHG 548



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 16/145 (11%)

Query: 3   GKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFP 62
            +CGSV  ++Q+FDK+  R   +WN+ML AY  +G+    L  +S+M       D  TF 
Sbjct: 414 ARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDA---QPDGATFV 470

Query: 63  CVIKACAMLKDLDCGAKI-------HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            ++ AC+     + GAKI       HG+V +  + +       +V +  +     +A++L
Sbjct: 471 ALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYAC------MVDILGRAGQISEAKEL 524

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQ 140
            D+M  + D V+W++++ +    G+
Sbjct: 525 IDKMPMEPDSVVWSALLGSCRKHGE 549


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/658 (35%), Positives = 375/658 (56%), Gaps = 6/658 (0%)

Query: 181 EIHAATVKSGQNLQVYVANALI--AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IH + +    +   ++ N L+   ++ R  K +       Q  N     +NS++ GFV 
Sbjct: 31  QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPN--IFLYNSLINGFVN 88

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N L+ + +  F  ++  G           + A  R  +   G +LH+  +K GF  D+  
Sbjct: 89  NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             +L+ +Y+    +N   ++F ++  +  ++WT + +GY  +  H +A++LF+ +   G+
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D   I  VL AC  +  +   + I  Y+    +  +  +   +V++Y KCG ++ +R+
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+S+  KD+V+W++MI  Y  N    E +ELF  M + N++ D  ++V  LS+ +SL  
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L  G+     I R  F     +A++L+DMYA+CGA+    +VF  ++ KD+++  + I+ 
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              +G  K++  +F + E    +PD  TFL LL  C H+GLI +G +F   + C Y L  
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHY C+VDL GRA  L++AY+ +  M + P A VW ALL  CR+  + +L E V K+L
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           + L+P N GNYV +SN+++   +W +  +VR  M   G+KK PG SWIE+  K+H F+A 
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           DKSH  SD+IY KL ++  ++ R  G+V  T+FV  +VEEEEK ++L  HSE+LA+A G+
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEM-RLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGL 627

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +  G +IR+ KNLRVC DCH   KL+S++  RE+VVRD NRFH F  G CSC DYW
Sbjct: 628 ISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 217/451 (48%), Gaps = 56/451 (12%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           LF       +F +N+++  +V+N      L+ +  +R  G+ +  FTFP V+KAC     
Sbjct: 67  LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
              G  +H LV+KCG++     + SL+++Y+       A +LFD + ++  VV W ++ S
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS-VVTWTALFS 185

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
            Y+ SG+  EA+ LF++M  +G+  ++Y  V  L AC           +H   + SG+ +
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC-----------VHVGDLDSGEWI 234

Query: 194 QVY-----------VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
             Y           V   L+ +YA+CGKM +A  V   +  KD V+W++M+ G+  N   
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            + ++ F ++     KPDQ   V  +S+   LG L  G+   +   +  F+++L + N L
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-ALELFRTVQLEGLDAD 361
           +DMYAKC  +     VF +M  +D +     I+G A+N  H+K +  +F   +  G+  D
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNG-HVKLSFAVFGQTEKLGISPD 413

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI----------------VDV 405
               GS  +   GL C      +H  +I+ GL      NAI                VD+
Sbjct: 414 ----GSTFL---GLLCGC----VHAGLIQDGLR---FFNAISCVYALKRTVEHYGCMVDL 459

Query: 406 YGKCGNIDYS-RNVFESIESKDVVSWTSMIS 435
           +G+ G +D + R + +     + + W +++S
Sbjct: 460 WGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 227/464 (48%), Gaps = 8/464 (1%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ--LFDRMGEKEDVVLWNSIISAYS 136
           +IH  ++        F+VN L+    +   FR+ +   L     +  ++ L+NS+I+ + 
Sbjct: 31  QIHVSLINHHLHHDTFLVNLLLK---RTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFV 87

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
            +    E L LF  +++ GL  + +TF   L+AC  +S   LG+++H+  VK G N  V 
Sbjct: 88  NNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVA 147

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
              +L+++Y+  G++ +A  +  ++ ++  V+W ++ +G+  +  + +A+  F+++   G
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG 207

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            KPD    V  +SA   +G+L +G+ +  Y  +     +  +  TL+++YAKC  +    
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            VF  M  +D ++W+T+I GYA N+   + +ELF  +  E L  D   I   L +C+ L 
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327

Query: 377 CMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +   +     I R + L++L + NA++D+Y KCG +     VF+ ++ KD+V   + IS
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFN 494
               NG    +  +F    +  +  D  T +  L       +++ G +  N         
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447

Query: 495 LEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMINA 537
                   +VD++ R G LD A ++  +     + I+W ++++ 
Sbjct: 448 RTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 135/261 (51%), Gaps = 3/261 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   G + DA +LFD++  R+V TW A+   Y ++G     ++ + +M  +G+  D++ 
Sbjct: 155 IYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYF 214

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  + DLD G  I   + +       F+  +LV +YAKC    KAR +FD M 
Sbjct: 215 IVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMV 274

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK D+V W+++I  Y+++    E + LF +M +  L  + ++ V  L +C       LG 
Sbjct: 275 EK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG- 332

Query: 181 EIHAATVKSGQNL-QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           E   + +   + L  +++ANALI MYA+CG M     V  +++ KD V  N+ ++G  +N
Sbjct: 333 EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKN 392

Query: 240 DLYCKAMQFFRELQGAGQKPD 260
                +   F + +  G  PD
Sbjct: 393 GHVKLSFAVFGQTEKLGISPD 413



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 133/270 (49%), Gaps = 7/270 (2%)

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
           +AC+    ++  K+IH  +I   L  D  ++N ++          YS  +F   +  ++ 
Sbjct: 22  VACT----VNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIF 77

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
            + S+I+ +V+N L +E L+LF  + +  +     T    L A +  S  K G +L+  +
Sbjct: 78  LYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLV 137

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           ++ GFN + +  +SL+ +Y+  G L+ A+K+F+ +  + ++ WT++ +     GR + AI
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
           DLF KM      PD    + +L AC H G ++ G+  ++ M  + ++         LV+L
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME-EMEMQKNSFVRTTLVNL 256

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
             +   +E+A     SM +E     W  ++
Sbjct: 257 YAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/675 (34%), Positives = 382/675 (56%), Gaps = 6/675 (0%)

Query: 81  HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
           H L +K G  ++ +  N++++ YAKC + R A ++F    ++ D V WN++I+ +   G 
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQR-DAVSWNTMIAGFVNLGN 80

Query: 141 CLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANA 200
              AL   + M+R G   + Y+F + L+      +  +G ++H+  VK G    V+  +A
Sbjct: 81  FETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSA 140

Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
           L+ MYA+C ++ +A  V   +  ++SV+WN++++G+ Q      A      ++  G + D
Sbjct: 141 LLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEID 200

Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
                  ++            ++HA  +K G  SD  + N ++  Y++C  +    RVF 
Sbjct: 201 DGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFD 260

Query: 321 -QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
             +  +D ++W +++A Y  NN   +A +LF  +Q+ G + D+    SV+ A        
Sbjct: 261 GAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQG 320

Query: 380 QTKEIHGYIIRKGLSDLV-ILNAIVDVYGKC--GNIDYSRNVFESIESKDVVSWTSMISS 436
           Q K +HG +I++GL  LV I N+++ +Y K    ++D + N+FES+E+KD VSW S+++ 
Sbjct: 321 QGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTG 380

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           +  +GL+ +AL+ F  M    V  D     + L + S L+ L+ G++++  +++ GF   
Sbjct: 381 FSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPN 440

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
           G VASSL+ MY++CG ++ A K F+       I W S+I     HGRGK+A+DLF+ M+ 
Sbjct: 441 GFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD 500

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
                DHITF+A+L ACSH GL+ EG  FL+ M  DY + P  EHYAC++DLLGRA  L+
Sbjct: 501 RRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLD 560

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EA   + +M  EP A VW  LLGACR   + EL   VA  LLEL+P     YVL+S++F 
Sbjct: 561 EAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFG 620

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
             R+W +   ++  M+  G+KK PG SWIE+ N++ SF A D+SH   +EIY +L E+ E
Sbjct: 621 HLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELME 680

Query: 737 KLEREGGYVAQTQFV 751
           ++ R   YVA ++ +
Sbjct: 681 EIRRL-DYVANSEIM 694



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 277/542 (51%), Gaps = 7/542 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCG +  A ++F + SQR   +WN M+  +V+ G     LE    M+  G +VD ++F
Sbjct: 44  YAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSF 103

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++K  A +  ++ G ++H +++K GY+   F  ++L+ MYAKC     A ++F  +  
Sbjct: 104 GSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINI 163

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           +  V  WN++IS Y+  G    A  L   M+  G+  +  TF   L   +D     L  +
Sbjct: 164 RNSVT-WNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQ 222

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY-QLENKDSVSWNSMLTGFVQND 240
           +HA  VK G      V NA+I  Y+ CG + +A  V    +E +D V+WNSML  ++ N+
Sbjct: 223 VHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNN 282

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A Q F E+Q  G +PD     + +SA+    +   GK LH   IK+G    + I N
Sbjct: 283 QEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISN 342

Query: 301 TLMDMYAKCC--CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           +L+ MY K     ++    +F  +  +D +SW +I+ G++Q+     AL+ F  ++ + +
Sbjct: 343 SLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYV 402

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D     +VL +CS L  +   +++H  +++ G   +  + ++++ +Y KCG I+ +R 
Sbjct: 403 VIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARK 462

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            F++      ++W S+I  Y  +G    AL+LF+LM +  V+ D IT V+ L+A S + +
Sbjct: 463 SFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGL 522

Query: 478 LKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMI 535
           +++G   L       G        + ++D+  R G LD A  +   +    D ++W +++
Sbjct: 523 VEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLL 582

Query: 536 NA 537
            A
Sbjct: 583 GA 584



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 220/446 (49%), Gaps = 15/446 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  V DA ++F  ++ R   TWNA++  Y   G+          M + G+ +D  T
Sbjct: 144 MYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGT 203

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++             ++H  ++K G  S   + N+++  Y++C     A ++FD   
Sbjct: 204 FAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAI 263

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  D+V WNS+++AY  + Q  EA  LF EMQ +G   + YT+ + + A  + S +  G 
Sbjct: 264 ETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGK 323

Query: 181 EIHAATVKSGQNLQVYVANALIAMY--ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
            +H   +K G    V ++N+LIAMY  +    M EA  +   LENKD VSWNS+LTGF Q
Sbjct: 324 SLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQ 383

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           + L   A++FF  ++      D       + +   L  L  G+++H   +K GF  +  +
Sbjct: 384 SGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFV 443

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            ++L+ MY+KC  +    + F        I+W ++I GYAQ+     AL+LF  ++   +
Sbjct: 444 ASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRV 503

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVI------LNAIVDVYGKCGN 411
             D +   +VL ACS +  + +     G+   K + SD  I         ++D+ G+ G 
Sbjct: 504 KLDHITFVAVLTACSHIGLVEE-----GWSFLKSMESDYGIPPRMEHYACMIDLLGRAGR 558

Query: 412 IDYSRNVFESIE-SKDVVSWTSMISS 436
           +D ++ + E++    D + W +++ +
Sbjct: 559 LDEAKALIEAMPFEPDAMVWKTLLGA 584



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 4/167 (2%)

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           SS + L +    +   I+ G       A++++  YA+CG + IA+K+F     +D + W 
Sbjct: 10  SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM-RC 591
           +MI      G  + A++    M+   FA D  +F ++L   +  G +  G++   +M + 
Sbjct: 70  TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKM 129

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
            Y+ + +    + L+D+  +   +E+A++  +S+ I  +   W AL+
Sbjct: 130 GYEGNVFAG--SALLDMYAKCERVEDAFEVFKSINIRNSV-TWNALI 173


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/559 (38%), Positives = 347/559 (62%), Gaps = 4/559 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +H + IK  ++  + +   L+ +Y KC C+     +F +M  ++ +SWT +I+ Y+Q
Sbjct: 81  GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQ 140

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVI 398
                +AL LF  +     + +     ++L +C G       ++IH   I++   S + +
Sbjct: 141 RGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFV 200

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            ++++D+Y K G I  +  VF  +  +DVV+ T++IS Y   GL  EAL+LF  +    +
Sbjct: 201 GSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGM 260

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
            S+S+T  S L+A S L+ L  GK+++  ++R G      + +SL+DMY++CG +  A +
Sbjct: 261 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 320

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSG 577
           +F+ +  +  I W +M+     HG  +  ++LF  M  E+   PD IT+LA+L  CSH  
Sbjct: 321 IFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQ 380

Query: 578 LINEGKK-FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           L + G + F  ++     ++P   HY C+VDLLGRA  +EEA+ F++ M   PTA +W +
Sbjct: 381 LEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGS 440

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LLG+CRVHS+ E+G IV +KLLEL+P N GNYV++SN++A++ KW+D+  +R  M+   +
Sbjct: 441 LLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAV 500

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
            K PG SW+E+   +H+F A D +H   +E+  K+ E++ K  +E GYV     VL++V+
Sbjct: 501 TKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKF-KEDGYVPDLSCVLYDVD 559

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EE+K ++L GHSE+LA+A+G++ + EG+ IR+ KNLR+CVDCHSF K VSRL+ R +++R
Sbjct: 560 EEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILR 619

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D NRFH+   GVCSCGDYW
Sbjct: 620 DKNRFHNIVGGVCSCGDYW 638



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 225/427 (52%), Gaps = 17/427 (3%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
           S++  F+ +  L    S+G+   + E   +M +LG  V    +  ++  C   + +  G 
Sbjct: 26  SRQISFSPSPNLKTLCSSGQ---LKEALLQMAILGREVKFEGYDSILNECVSQRAIREGQ 82

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H  ++K  Y  + ++   L+ +Y KC     AR +FD M ++ +VV W ++ISAYS  
Sbjct: 83  RVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR-NVVSWTAMISAYSQR 141

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS-SFETLGMEIHAATVKSGQNLQVYV 197
           G   EAL LF EM R     N +TF   L +C  S  FET G +IH+  +K      ++V
Sbjct: 142 GFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFET-GRQIHSIAIKRNYESHMFV 200

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
            ++L+ MYA+ G++ +A GV + L  +D V+  ++++G+ Q  L  +A++ FR+LQ  G 
Sbjct: 201 GSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGM 260

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
             + V   + ++A   L  L +GK++H++ ++ G  S + + N+L+DMY+KC  V Y  R
Sbjct: 261 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 320

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLK 376
           +F  M  +  ISW  ++ GY+++    + LELF+ ++ E  +  D +   +VL  CS  +
Sbjct: 321 IFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQ 380

Query: 377 CMSQTKEIHGYII--RKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS---- 429
                 EI   ++  + G+  D+     +VD+ G+ G ++     F+ I+    V     
Sbjct: 381 LEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVE---EAFDFIKKMPFVPTAAI 437

Query: 430 WTSMISS 436
           W S++ S
Sbjct: 438 WGSLLGS 444



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 174/349 (49%), Gaps = 29/349 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  + DA  +FD++ QR V +W AM+ AY   G     L  +  M       + FT
Sbjct: 106 LYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFT 165

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ +C      + G +IH + +K  Y+S  F+ +SL+ MYAK      A  +F  + 
Sbjct: 166 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DVV   +IIS Y+  G   EAL LFR++Q  G+ +N+ T+ + L A    +    G 
Sbjct: 226 ER-DVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGK 284

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+  ++SGQ   V + N+LI MY++CG +  A  +   +  +  +SWN+ML G+ ++ 
Sbjct: 285 QVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHG 344

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVS--ASGRLG--------NLLNGKELHAYAIK 289
           +  + ++ F+ ++   + KPD +  +  +S  + G+L         N++NGK+       
Sbjct: 345 MAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKD------- 397

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
            G   D  IG+     Y   C V+ +GR      A DFI     +   A
Sbjct: 398 -GIEPD--IGH-----YG--CVVDLLGRAGRVEEAFDFIKKMPFVPTAA 436



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 62/122 (50%)

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           S L+   S   +++G+ ++  +I+  +     + + L+ +Y +C  L  A  +F+ +  +
Sbjct: 67  SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR 126

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           +++ WT+MI+A    G    A++LF +M      P+H TF  +L +C  S     G++  
Sbjct: 127 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 186

Query: 587 EI 588
            I
Sbjct: 187 SI 188


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/662 (35%), Positives = 371/662 (56%), Gaps = 48/662 (7%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMT----EAAGVLYQLENKDSVS-WNSMLTG 235
           + HA  +++G     Y+A +L+  YA          E++  ++    K +V  WN M+  
Sbjct: 53  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 112

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            ++N+   KA+  + E+  A  +P++      + A    G +  G ++HA+ +K G   D
Sbjct: 113 CIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGD 172

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQ 354
             I ++ + MYA    +    R+      + D + W  +I GY +      A ELF    
Sbjct: 173 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF---- 228

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            EG+    MI                                   NA++  + +CG ++ 
Sbjct: 229 -EGMPDRSMI--------------------------------STWNAMISGFSRCGMVEV 255

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R  F+ ++ +D +SW++MI  Y+  G   EALE+F+ M +  +      L S LSA ++
Sbjct: 256 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 315

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L  L +G+ ++ +  R    L+G + +SLVDMYA+CG +D+A +VF  +  K++  W +M
Sbjct: 316 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 375

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I    +HGR + AIDLF KM+     P+ ITF+ +L AC+H GL+ +G      MR +Y 
Sbjct: 376 IGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYG 432

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           ++P  EHY C+VDLLGRA  L EA + V S+  EPT  VW ALLGACR H N ELGE V 
Sbjct: 433 VEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVG 492

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN-KIHS 713
           K LLEL+P N G Y L+SN++A + +W++V +VR  M+  G+K TPG+S I++G  ++H 
Sbjct: 493 KILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHK 552

Query: 714 FIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAI 773
           FI  D SH +  +IY+ L ++ E+L+ E GY      VL +++EEEK   ++ HSE+LAI
Sbjct: 553 FIIGDGSHPQVKDIYQMLDKVKERLQME-GYEPDPSQVLFDIDEEEKETAVWQHSEKLAI 611

Query: 774 AYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
            +G++ ++ G+ IRI KNLRVC DCHS  KL+S+++ RE++VRD  R+HHF  G CSC D
Sbjct: 612 GFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKD 671

Query: 834 YW 835
           +W
Sbjct: 672 FW 673



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 235/487 (48%), Gaps = 60/487 (12%)

Query: 81  HGLVLKCGYDSTDFIVNSLVAMYA-----KCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
           H L+L+ G+    +I  SLV  YA     +   F  + ++FD +  K +V LWN +I   
Sbjct: 55  HALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFV-RKPNVFLWNCMIKVC 113

Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
             + +  +A+ L+ EM       N YT+ A L+AC DS     G+++HA  VK G     
Sbjct: 114 IENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDG 173

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           ++ ++ I MYA  G++ EA  +L     + D+V WN+M+ G++                 
Sbjct: 174 HILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYL----------------- 216

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
                             R G +   +EL      +  +S     N ++  +++C  V  
Sbjct: 217 ------------------RFGEVEAARELFEGMPDRSMISTW---NAMISGFSRCGMVEV 255

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
               F +M  +D ISW+ +I GY Q  C ++ALE+F  +Q E +     ++ SVL AC+ 
Sbjct: 256 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 315

Query: 375 LKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L  + Q + IH Y  R  +  D V+  ++VD+Y KCG ID +  VFE + +K+V SW +M
Sbjct: 316 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 375

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I     +G A +A++LF  M   ++  + IT V  L+A +   +++KG  +    +RK +
Sbjct: 376 IGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNS-MRKEY 431

Query: 494 NLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMINANGLHGR------- 543
            +E  +     +VD+  R G L  A KV + + T+    +W +++ A   HG        
Sbjct: 432 GVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERV 491

Query: 544 GKVAIDL 550
           GK+ ++L
Sbjct: 492 GKILLEL 498



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 204/441 (46%), Gaps = 72/441 (16%)

Query: 13  QLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           ++FD V +  VF WN M+   + N EP + +  Y  M V     + +T+P V+KAC+   
Sbjct: 93  RVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSG 152

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
            +  G ++H  ++K G      I++S + MYA      +AR++ D  G + D V WN++I
Sbjct: 153 VVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMI 212

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
             Y   G+   A  LF  M    +++                                  
Sbjct: 213 DGYLRFGEVEAARELFEGMPDRSMIS---------------------------------- 238

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
                 NA+I+ ++RCG +  A     +++ +D +SW++M+ G++Q   + +A++ F ++
Sbjct: 239 ----TWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQM 294

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           Q    +P +    + +SA   LG L  G+ +H YA +     D  +G +L+DMYAKC  +
Sbjct: 295 QKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRI 354

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
           +    VF +M+ ++  SW  +I G A +     A++LF  + +     ++  +G VL AC
Sbjct: 355 DLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDI--YPNEITFVG-VLNAC 411

Query: 373 SGLKCMSQTKEIHGYIIRKGLSDLVILNA----------------IVDVYGKCGNIDYSR 416
           +           HG +++KGL+   I N+                IVD+ G+ G +  + 
Sbjct: 412 A-----------HGGLVQKGLT---IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE 457

Query: 417 NVFESIESKDVVS-WTSMISS 436
            V  SI ++   + W +++ +
Sbjct: 458 KVVSSIPTEPTPAVWGALLGA 478



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 6/234 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           + +CG V  A + FD++ +R   +W+AM+  Y+  G  +  LE + +M+   I    F  
Sbjct: 247 FSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVL 306

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+ ACA L  LD G  IH    +        +  SLV MYAKC     A ++F++M  
Sbjct: 307 PSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN 366

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           KE V  WN++I   +  G+  +A+ LF +M    +  N  TFV  L AC        G+ 
Sbjct: 367 KE-VSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQKGLT 422

Query: 182 IHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
           I  +  K  G   Q+     ++ +  R G +TEA  V+  +  + + + W ++L
Sbjct: 423 IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALL 476



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 18/274 (6%)

Query: 378 MSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDY-----SRNVFESIESKDVVSWT 431
           +   K+ H  I+R G L D  I  ++V  Y       Y     S  VF+ +   +V  W 
Sbjct: 48  LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 107

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
            MI   + N    +A+ L+Y M  A+   +  T  + L A S   ++ +G +++  +++ 
Sbjct: 108 CMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKH 167

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDL 550
           G   +G + SS + MYA  G L  A ++ +    + D + W +MI+     G  + A +L
Sbjct: 168 GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAREL 227

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLG 610
           F  M   S      T+ A++   S  G++   ++F + M+   ++      ++ ++D   
Sbjct: 228 FEGMPDRSMIS---TWNAMISGFSRCGMVEVAREFFDEMKERDEIS-----WSAMIDGYI 279

Query: 611 RANHLEEAYQFVRSMQ---IEPTAEVWCALLGAC 641
           +     EA +    MQ   I P   V  ++L AC
Sbjct: 280 QEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC 313



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 3/69 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F+K+S + V +WNAM+G    +G     ++ +S+M    I  +  T
Sbjct: 347 MYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEIT 403

Query: 61  FPCVIKACA 69
           F  V+ ACA
Sbjct: 404 FVGVLNACA 412


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/705 (34%), Positives = 388/705 (55%), Gaps = 10/705 (1%)

Query: 21  RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDC---- 76
           R+ F WN++  A  S G P   L  Y+ M   G+  D  TFP  + A A     +     
Sbjct: 69  RSAFLWNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPA 128

Query: 77  -GAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISA 134
            GA++H   L+ G    D F  N+LV  YA       AR++FD M  + D+V WNS++SA
Sbjct: 129 KGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPAR-DIVSWNSLVSA 187

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
              +G   +A      M R G+  N  + V+ + AC     E  G+ +H   +KSG +  
Sbjct: 188 LLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSV 247

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V + NAL+ MY + G +  +  V   ++ K+ VSWNS L  F     +   ++ FR +  
Sbjct: 248 VNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSE 307

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
               P  V   + + A   LG    GKE+H Y+I++   SD+ I N+LMDMYAK  C+  
Sbjct: 308 HEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEK 367

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
              +F  +  ++ +SW  +IA  AQN    +A  L   +Q  G   +   + ++L ACS 
Sbjct: 368 ASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSR 427

Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +  +   K+IH + I + L SDL + NA++DVY KCG +  ++++F+  E KD VS+ ++
Sbjct: 428 VASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSE-KDDVSYNTL 486

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I  Y  +    E+L LF  M  A +E D+++ +  LSA ++LS  K+GKE++G ++R+  
Sbjct: 487 IVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLL 546

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
           N    +A+SL+D+Y + G L  A+K+FN +  KD+  W +MI   G+HG+  VA +LF  
Sbjct: 547 NTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDL 606

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           M+ +    DH++++A+L ACSH GL++ GKK+   M     + P   HYAC+VDLLGRA 
Sbjct: 607 MKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAG 665

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISN 673
            L E+ + + +M     ++VW ALLG+CR+H + EL  + A+ L EL P + G Y L+ N
Sbjct: 666 QLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRN 725

Query: 674 VFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           +++ S  W +  +++  M+   ++K P  SW++ GNK+ +F+  D
Sbjct: 726 MYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 770



 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 177/587 (30%), Positives = 315/587 (53%), Gaps = 21/587 (3%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR----MRVLGISVDAFTFPCVIKACA 69
           +FD++  R + +WN+++ A ++NG    +LE   R    M   GI V+  +   V+ AC 
Sbjct: 169 VFDEMPARDIVSWNSLVSALLTNG----MLEDAKRAVVGMMRSGIPVNVASLVSVVPACG 224

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
             +D   G  +HGLVLK G DS   + N+LV MY K  D   + ++F+ M EK +V  WN
Sbjct: 225 TERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVS-WN 283

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           S +  ++ +G   + L +FR M    +   + T  + L A  D  +  LG E+H  +++ 
Sbjct: 284 SALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRR 343

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
                +++AN+L+ MYA+ G + +A+ +   +E ++ VSWN+M+    QN    +A    
Sbjct: 344 AMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLV 403

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            E+Q  G+ P+    VN + A  R+ ++  GK++HA++I +  +SDL + N L+D+YAKC
Sbjct: 404 IEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKC 463

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             ++    +F   + +D +S+ T+I GY+Q+ C  ++L LF+ ++  G++ D +     L
Sbjct: 464 GQLSVAQDIF-DRSEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCL 522

Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            AC+ L    Q KEIHG ++R+ L+    L N+++D+Y K G +  +  +F  I  KDV 
Sbjct: 523 SACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVA 582

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
           SW +MI  Y  +G  + A ELF LM +  V+ D ++ ++ LSA S   ++ +GK+    +
Sbjct: 583 SWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQM 642

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMINANGLHGRGKVA 547
           I +    +    + +VD+  R G L  + ++  N     +  +W +++ +  +HG  ++A
Sbjct: 643 IAQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELA 702

Query: 548 IDLFYKMEAE---SFAPDHITFLALLYAC-SHSGLINEGKKFLEIMR 590
                ++ AE      P+H  +  LL    S SG+ NE  +   +M+
Sbjct: 703 -----RLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMK 744



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 233/440 (52%), Gaps = 8/440 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGK G +  + ++F+ + ++   +WN+ LG +   G    VLE +  M    ++  + T
Sbjct: 257 MYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVT 316

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A   L     G ++HG  ++   +S  FI NSL+ MYAK     KA  +F+ + 
Sbjct: 317 LSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENI- 375

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  +VV WN++I+  + +G   EA  L  EMQ+ G   N++T V  L AC   +   +G 
Sbjct: 376 EGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGK 435

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA ++       ++V+NALI +YA+CG+++ A  +  + E KD VS+N+++ G+ Q+ 
Sbjct: 436 QIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSE-KDDVSYNTLIVGYSQSQ 494

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +++  F++++ AG + D V  +  +SA   L     GKE+H   +++   +   + N
Sbjct: 495 CCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLAN 554

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+D+Y K   +    ++F ++T +D  SW T+I GY  +     A ELF  ++ +G+D 
Sbjct: 555 SLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDY 614

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVF 419
           D +   +VL ACS    + + K+    +I + +    +  A +VD+ G+ G +  S  + 
Sbjct: 615 DHVSYIAVLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESVEII 674

Query: 420 ESIE---SKDVVSWTSMISS 436
            ++    + DV  W +++ S
Sbjct: 675 TNMPFPANSDV--WGALLGS 692



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 216/437 (49%), Gaps = 20/437 (4%)

Query: 183 HAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQN 239
           HAA++ SG     + +A AL+  YA    +  A  +L  + L  + +  WNS+       
Sbjct: 25  HAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASA 84

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAV-----SASGRLGNLLNGKELHAYAIKQG-FV 293
            L  +A++ +  +  +G +PD      A+     +      +   G ELHA A+++G  +
Sbjct: 85  GLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLL 144

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           +D+  GNTL+  YA         RVF +M A+D +SW ++++    N     A      +
Sbjct: 145 ADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGM 204

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNI 412
              G+  +V  + SV+ AC   +       +HG +++ GL  +V L NA+VD+YGK G++
Sbjct: 205 MRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDL 264

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           + S  VF  ++ K+ VSW S +  + H G   + LE+F +M+E  V   S+TL S L A 
Sbjct: 265 ESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPAL 324

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
             L     GKE++G+ IR+    +  +A+SL+DMYA+ G L+ A+ +F  ++ ++++ W 
Sbjct: 325 VDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWN 384

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           +MI     +G    A  L  +M+     P+  T + LL ACS    +  GK         
Sbjct: 385 AMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGK--------- 435

Query: 593 YQLDPWPEHYACLVDLL 609
            Q+  W  H + + DL 
Sbjct: 436 -QIHAWSIHRSLMSDLF 451


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/594 (38%), Positives = 335/594 (56%), Gaps = 40/594 (6%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K +HA  ++ G   D  + N ++         NY  R+F+Q    +   + T+I G   N
Sbjct: 27  KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
           +   +++E++ +++ EGL  D      +L AC+ L       ++HG +++ G  SD  + 
Sbjct: 87  DSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVN 146

Query: 400 NAIVDVYGKCGNIDYSRNVFESIE------------------------------------ 423
            ++V +YGKCG ID +  VF+ I                                     
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDG 206

Query: 424 --SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
              KD+VSW+SMI  Y  NGL  EAL+LF+ M       D   +V  L A + L  L+ G
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
              +  + R  F     + ++L+DMYA+CG +D A +VF  ++ KD+++W + I+   + 
Sbjct: 267 NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMS 326

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G  K A  LF +ME     PD  TF+ LL AC+H+GL++EG+++   M   + L P  EH
Sbjct: 327 GHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEH 386

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           Y C+VDLLGRA  L+EA+Q V+SM +E  A VW ALLG CR+H + +L E V K+L+ L+
Sbjct: 387 YGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALE 446

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
           P N GNYVL+SN+++AS KW+D  ++R  M   G+KK PG SWIE+   +H F+  D SH
Sbjct: 447 PSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSH 506

Query: 722 SESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKST 781
             S++IY KL E+ + L +  GYV  T +VL ++EEEEK   +  HSE+LAIA+G++ + 
Sbjct: 507 PLSEKIYAKLGELVKDL-KASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTA 565

Query: 782 EGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
               IR+ KNLRVC DCH   K +SR  GRE++VRD NRFH F  G CSC DYW
Sbjct: 566 PNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 166/383 (43%), Gaps = 47/383 (12%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           + ++F +  +  +F +N M+   V N      +E Y  MR  G+S D+FTFP ++KACA 
Sbjct: 61  SHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACAR 120

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC---------YD------------- 108
           L D   G K+HGLV+K G +S  F+  SLV++Y KC         +D             
Sbjct: 121 LLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAI 180

Query: 109 ----------------FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
                           FR+A  +FD M EK D+V W+S+I  Y+++G   EAL LF +M 
Sbjct: 181 ISGYIGVGKCREAIDMFRRACSVFDGMLEK-DIVSWSSMIQGYASNGLPKEALDLFFKML 239

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
             G   + Y  V  L AC       LG        ++       +  ALI MYA+CG+M 
Sbjct: 240 NEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMD 299

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
            A  V   +  KD V WN+ ++G   +     A   F +++ +G +PD    V  + A  
Sbjct: 300 SAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACT 359

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
             G +  G        +Q F S  ++     ++    C V+ +GR  +   A   +    
Sbjct: 360 HAGLVDEG--------RQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMP 411

Query: 333 IIAGYAQNNCHLKALELFRTVQL 355
           + A        L    L R  QL
Sbjct: 412 MEANAIVWGALLGGCRLHRDTQL 434



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 193/438 (44%), Gaps = 44/438 (10%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HAA ++ G +   Y+ N ++      G    +  + +Q +  +   +N+M+ G V ND
Sbjct: 28  HVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLND 87

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            + ++++ +  ++  G  PD       + A  RL +   G +LH   +K G  SD  +  
Sbjct: 88  SFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNT 147

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA------------------------- 335
           +L+ +Y KC  ++   +VF  +  ++  +WT II+                         
Sbjct: 148 SLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGM 207

Query: 336 -------------GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
                        GYA N    +AL+LF  +  EG   D   +  VL AC+ L  +    
Sbjct: 208 LEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGN 267

Query: 383 EIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
                + R + L + V+  A++D+Y KCG +D +  VF  +  KD+V W + IS    +G
Sbjct: 268 WASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSG 327

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA- 500
               A  LF  M ++ +E D  T V  L A +   ++ +G++    + R  F L   +  
Sbjct: 328 HVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERV-FTLTPEIEH 386

Query: 501 -SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEA-E 557
              +VD+  R G LD A+++   +  + + I+W +++    LH   ++   +  ++ A E
Sbjct: 387 YGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALE 446

Query: 558 SFAPDHITFLALLYACSH 575
                +   L+ +Y+ SH
Sbjct: 447 PSNSGNYVLLSNIYSASH 464



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 41/302 (13%)

Query: 374 GLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
           G   +   K +H  ++R GL  D  +LN ++      GN +YS  +F   +  ++  + +
Sbjct: 19  GFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNT 78

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MI   V N    E++E+++ M +  +  DS T    L A + L   K G +L+G +++ G
Sbjct: 79  MIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAG 138

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQ---------------------------- 524
              +  V +SLV +Y +CG +D A KVF+ +                             
Sbjct: 139 CESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFR 198

Query: 525 ----------TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
                      KD++ W+SMI     +G  K A+DLF+KM  E F PD    + +L AC+
Sbjct: 199 RACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACA 258

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
             G +  G     +M  +  L   P     L+D+  +   ++ A++  R M+ +    VW
Sbjct: 259 RLGALELGNWASNLMDRNEFLGN-PVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIV-VW 316

Query: 635 CA 636
            A
Sbjct: 317 NA 318



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 120/286 (41%), Gaps = 63/286 (22%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTV------------------------------------- 23
           +YGKCG + +A ++FD + ++ V                                     
Sbjct: 152 LYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKD 211

Query: 24  -FTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHG 82
             +W++M+  Y SNG P   L+ + +M   G   D +    V+ ACA L  L+ G     
Sbjct: 212 IVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASN 271

Query: 83  LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCL 142
           L+ +  +     +  +L+ MYAKC     A ++F  M  K+D+V+WN+ IS  + SG   
Sbjct: 272 LMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGM-RKKDIVVWNAAISGLAMSGHVK 330

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL-----QVYV 197
            A GLF +M++ G+  +  TFV  L AC            HA  V  G+       +V+ 
Sbjct: 331 AAFGLFGQMEKSGIEPDGNTFVGLLCAC-----------THAGLVDEGRQYFNSMERVFT 379

Query: 198 ANALIAMY-------ARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
               I  Y        R G + EA  ++  +    +++ W ++L G
Sbjct: 380 LTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG 425



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 80/172 (46%), Gaps = 10/172 (5%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           LK  K ++  ++R G + +  + + ++      G  + ++++F+  +  ++ L+ +MI+ 
Sbjct: 23  LKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHG 82

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLD 596
             L+   + +I++++ M  E  +PD  TF  LL AC+       G K    +++   + D
Sbjct: 83  LVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESD 142

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL------GACR 642
            +      LV L G+   ++ A++    +  E     W A++      G CR
Sbjct: 143 AFVN--TSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIISGYIGVGKCR 191


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/715 (33%), Positives = 405/715 (56%), Gaps = 7/715 (0%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D  L N +I  ++ +G    AL  +R M   G   + +TF   ++ C        G   H
Sbjct: 71  DAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAH 130

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
              +K G    VY  N+L+A YA+ G + +A  V   +  +D V+WN M+ G+V N L  
Sbjct: 131 GMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGS 190

Query: 244 KAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            A+  F+E+  A + + D V  + A++A     + + GKE+H Y I+ G   D+++G +L
Sbjct: 191 LALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSL 250

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMY KC  V Y   VF  M  +  ++W  +I GYA N    +A + F  ++ EGL  +V
Sbjct: 251 LDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEV 310

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFES 421
           +   ++L AC+  +     + +HGY++R+  L  +V+  A++++YGK G ++ S  +F  
Sbjct: 311 VTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGK 370

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           I +K +VSW +MI++Y++  +  EA+ LF  +    +  D  T+ + + A   L  L+  
Sbjct: 371 IANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHC 430

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           ++++ +II  G+     + ++++ MYAR G +  + ++F+ + +KD+I W +MI    +H
Sbjct: 431 RQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIH 490

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G+GK A+++F +M+     P+  TF+++L ACS SGL++EG     +M  +Y + P  EH
Sbjct: 491 GQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEH 550

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           Y C+ DLLGR   L E  QF+ SM I+PT+ VW +LL A R  ++ ++ E  A+++ +L+
Sbjct: 551 YGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLE 610

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
             N G Y+++S+++A + +W+DVE+VR+ M+  GL++T   S +E+ +   SF   D SH
Sbjct: 611 HDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSH 670

Query: 722 SESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEK-VQMLYGHSERLAIAYGVLKS 780
           S+S  I+    E+++ L R+      T+   + V    +   M   HS RLA+ +G++ S
Sbjct: 671 SQSRTIH----EVSDILSRKIKETDDTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLISS 726

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             GS I + KN+R+C  CH   KL+SR  GR +VV D+  +H F  G C CGDYW
Sbjct: 727 EIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 247/480 (51%), Gaps = 7/480 (1%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G + +A +    V     F  N M+  +   G P   L  Y  M   G   D FTFP V+
Sbjct: 55  GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           K CA L  LD G   HG+V+K G +   +  NSLVA YAK      A ++FD M  + D+
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVR-DI 173

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQAC--EDSSFETLGMEI 182
           V WN ++  Y ++G    AL  F+EM     V  ++   +AAL AC  E SS +  G EI
Sbjct: 174 VTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQ--GKEI 231

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H   ++ G    + V  +L+ MY +CG++  A  V   +  +  V+WN M+ G+  N+  
Sbjct: 232 HGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERP 291

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A   F +++  G + + V  +N ++A  +  + L G+ +H Y +++ F+  + +   L
Sbjct: 292 DEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETAL 351

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           ++MY K   V    ++F ++  +  +SW  +IA Y     + +A+ LF  +  + L  D 
Sbjct: 352 LEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDY 411

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGNIDYSRNVFES 421
             + +V+ A   L  +   ++IH YII  G ++  +I+NA++ +Y + G++  SR +F+ 
Sbjct: 412 FTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDK 471

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           + SKDV+SW +MI  Y  +G    ALE+F  M    ++ +  T VS L+A S   ++ +G
Sbjct: 472 MVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 185/373 (49%), Gaps = 2/373 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAFT 60
           Y K G V DAE++FD +  R + TWN M+  YVSNG     L  +  M   L +  D+  
Sbjct: 152 YAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVG 211

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + AC +      G +IHG V++ G +    +  SL+ MY KC +   AR +F  M 
Sbjct: 212 IIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMP 271

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  VV WN +I  Y+ + +  EA   F +M+  GL     T +  L AC  +     G 
Sbjct: 272 LRT-VVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGR 330

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   V+      V +  AL+ MY + GK+  +  +  ++ NK  VSWN+M+  ++  +
Sbjct: 331 SVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKE 390

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +Y +A+  F EL      PD       V A   LG+L + +++H+Y I  G+  +  I N
Sbjct: 391 MYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++ MYA+   V     +F +M ++D ISW T+I GYA +     ALE+F  ++  GL  
Sbjct: 451 AVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQP 510

Query: 361 DVMIIGSVLMACS 373
           +     SVL ACS
Sbjct: 511 NESTFVSVLTACS 523



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 188/378 (49%), Gaps = 4/378 (1%)

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
           + +L+   A  G+M EA   L  +   D+   N M+ GF    L   A+  +R +   G 
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +PD+      V    RLG L  G+  H   IK G   D+   N+L+  YAK   V    R
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ--LEGLDADVMIIGSVLMACSGL 375
           VF  M  +D ++W  ++ GY  N     AL  F+ +   LE     V II ++   C   
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEF 223

Query: 376 KCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
             M Q KEIHGY+IR GL  D+ +  +++D+Y KCG + Y+R+VF ++  + VV+W  MI
Sbjct: 224 SSM-QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMI 282

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
             Y  N   +EA + F  M    ++ + +T ++ L+A +       G+ ++G+++R+ F 
Sbjct: 283 GGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFL 342

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
               + ++L++MY + G ++ + K+F  +  K L+ W +MI A         AI LF ++
Sbjct: 343 PHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL 402

Query: 555 EAESFAPDHITFLALLYA 572
             +   PD+ T   ++ A
Sbjct: 403 LNQPLYPDYFTMSTVVPA 420



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 14/280 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  A  +F  +  RTV TWN M+G Y  N  P    + + +MR  G+ V+  T
Sbjct: 253 MYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVT 312

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA  +    G  +HG V++  +     +  +L+ MY K      + ++F ++ 
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG- 179
            K  +V WN++I+AY       EA+ LF E+    L  + +T    + A     F  LG 
Sbjct: 373 NKT-LVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPA-----FVLLGS 426

Query: 180 ----MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                +IH+  +  G      + NA++ MYAR G +  +  +  ++ +KD +SWN+M+ G
Sbjct: 427 LRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMG 486

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQ---VCTVNAVSASG 272
           +  +     A++ F E++  G +P++   V  + A S SG
Sbjct: 487 YAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSG 526



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY + G V+ + ++FDK+  + V +WN M+  Y  +G+    LE +  M+  G+  +  T
Sbjct: 455 MYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNEST 514

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK-CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC++   +D G     L+L+  G          +  +  +  D R+  Q  + M
Sbjct: 515 FVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESM 574

Query: 120 GEKEDVVLWNSIISA 134
                  +W S+++A
Sbjct: 575 PIDPTSRVWGSLLTA 589


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/632 (36%), Positives = 367/632 (58%), Gaps = 38/632 (6%)

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           F Q +   +A+ +   +     +P        ++A  R   L  GK +HA+     F+  
Sbjct: 42  FCQQNRLKEAVDYLHRIP----QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPG 97

Query: 296 LQIGNTLMDMYAKC------------------CCVNYM-------GRV------FYQMTA 324
           + I N L+ MYAKC                  C  N M       GR+      F +M  
Sbjct: 98  IVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPH 157

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQL-EGLDADVMIIGSVLMACSGLKCMSQTKE 383
           +D  SW  +I+GY     +++AL+LFR +Q  E  + ++  + S L A + +  + + KE
Sbjct: 158 RDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKE 217

Query: 384 IHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           IHGY+IR GL  D V+  A++D+YGKCG+++ +R +F+ +  KD+VSWT+MI     +G 
Sbjct: 218 IHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGR 277

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
             E   LF  +  + V  +  T    L+A + L+  + GKE++G++ R G++     AS+
Sbjct: 278 KKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASA 337

Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           LV +Y++CG  + A +VFN +   DL+ WTS+I     +G+  +A+  F  +      PD
Sbjct: 338 LVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPD 397

Query: 563 HITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV 622
            ITF+ +L AC+H+GL++ G ++   ++  + L    +HYAC++DLL R+   +EA   +
Sbjct: 398 EITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENII 457

Query: 623 RSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWK 682
            +M ++P   +W +LLG CR+H N EL E  AK L EL+P NP  Y+ +SN++A +  W 
Sbjct: 458 DNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWT 517

Query: 683 DVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREG 742
           +  +VR  M   G+ K PG SWIEI  ++H F+  D SH +  +I++ L E+++K++ E 
Sbjct: 518 EETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEE- 576

Query: 743 GYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFC 802
           GYVA T FVLH+VEEE+K Q ++ HSE+LA+A+G++ ++ G+ I++ KNLR CVDCH+  
Sbjct: 577 GYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAM 636

Query: 803 KLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           K +S++  R+++VRD+NRFH F  G CSC DY
Sbjct: 637 KYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 185/413 (44%), Gaps = 44/413 (10%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +I AC   + L+ G ++H       +     I N L+ MYAKC     A+ LFD + 
Sbjct: 66  YSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIP 125

Query: 121 EKE------------------------------DVVLWNSIISAYSASGQCLEALGLFRE 150
           +K+                              D   WN++IS Y + G  +EAL LFR 
Sbjct: 126 QKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRM 185

Query: 151 MQRVGLVT-NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           MQ       N +T  +AL A    S    G EIH   ++SG  L   V  AL+ +Y +CG
Sbjct: 186 MQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCG 245

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + EA G+  Q+ +KD VSW +M+    ++    +    FR+L G+G +P++      ++
Sbjct: 246 SLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLN 305

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A   L     GKE+H Y  + G+       + L+ +Y+KC       RVF QM   D +S
Sbjct: 306 ACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVS 365

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTK 382
           WT++I GYAQN     AL+ F ++   G   D +    VL AC+       GL+     K
Sbjct: 366 WTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVK 425

Query: 383 EIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMI 434
           E HG +        VI     D+  + G    + N+ +++  K D   W S++
Sbjct: 426 EKHGLVHTADHYACVI-----DLLARSGRFKEAENIIDNMPMKPDKFLWASLL 473



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 182/378 (48%), Gaps = 5/378 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS-VDAFT 60
           Y   G +  A +LFD++  R  F+WNA++  YVS G  +  L+ +  M+    S  + FT
Sbjct: 139 YANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFT 198

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + A A +  L  G +IHG +++ G +  + +  +L+ +Y KC    +AR +FD+M 
Sbjct: 199 LSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMA 258

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K D+V W ++I      G+  E   LFR++   G+  N YTF   L AC D + E +G 
Sbjct: 259 DK-DIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGK 317

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H    + G +   + A+AL+ +Y++CG    A  V  Q+   D VSW S++ G+ QN 
Sbjct: 318 EVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNG 377

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIG 299
               A+QFF  L  +G KPD++  V  +SA    G +  G E  H+   K G V      
Sbjct: 378 QPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHY 437

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALELFRTVQLEG 357
             ++D+ A+         +   M  + D   W +++ G     N  L         +LE 
Sbjct: 438 ACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEP 497

Query: 358 LDADVMIIGSVLMACSGL 375
            +    I  S + A +GL
Sbjct: 498 ENPATYITLSNIYANAGL 515



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 129/243 (53%), Gaps = 15/243 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL---GISVD 57
           +YGKCGS+ +A  +FD+++ + + +W  M+     +G   R  E +S  R L   G+  +
Sbjct: 240 LYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDG---RKKEGFSLFRDLMGSGVRPN 296

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            +TF  V+ ACA L     G ++HG + + GYD   F  ++LV +Y+KC +   AR++F+
Sbjct: 297 EYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFN 356

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           +M  + D+V W S+I  Y+ +GQ   AL  F  + R G   +  TFV  L AC  +    
Sbjct: 357 QM-PRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVD 415

Query: 178 LGME-IHAATVKSGQNLQVYVAN---ALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSM 232
           +G+E  H+   K G    V+ A+    +I + AR G+  EA  ++  +  K D   W S+
Sbjct: 416 IGLEYFHSVKEKHG---LVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASL 472

Query: 233 LTG 235
           L G
Sbjct: 473 LGG 475


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/662 (35%), Positives = 371/662 (56%), Gaps = 48/662 (7%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMT----EAAGVLYQLENKDSVS-WNSMLTG 235
           + HA  +++G     Y+A +L+  YA          E++  ++    K +V  WN M+  
Sbjct: 52  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 111

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            ++N+   KA+  + E+  A  +P++      + A    G +  G ++HA+ +K G   D
Sbjct: 112 CIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGD 171

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQ 354
             I ++ + MYA    +    R+      + D + W  +I GY +      A ELF    
Sbjct: 172 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF---- 227

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDY 414
            EG+    MI                                   NA++  + +CG ++ 
Sbjct: 228 -EGMPDRSMI--------------------------------STWNAMISGFSRCGMVEV 254

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R  F+ ++ +D +SW++MI  Y+  G   EALE+F+ M +  +      L S LSA ++
Sbjct: 255 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 314

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L  L +G+ ++ +  R    L+G + +SLVDMYA+CG +D+A +VF  +  K++  W +M
Sbjct: 315 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 374

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I    +HGR + AIDLF KM+     P+ ITF+ +L AC+H GL+ +G      MR +Y 
Sbjct: 375 IGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYG 431

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           ++P  EHY C+VDLLGRA  L EA + V S+  EPT  VW ALLGACR H N ELGE V 
Sbjct: 432 VEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVG 491

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN-KIHS 713
           K LLEL+P N G Y L+SN++A + +W++V +VR  M+  G+K TPG+S I++G  ++H 
Sbjct: 492 KILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHK 551

Query: 714 FIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAI 773
           FI  D SH +  +IY+ L ++ E+L+ E GY      VL +++EEEK   ++ HSE+LAI
Sbjct: 552 FIIGDGSHPQVKDIYQMLDKVKERLQME-GYEPDPSQVLFDIDEEEKETAVWQHSEKLAI 610

Query: 774 AYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
            +G++ ++ G+ IRI KNLRVC DCHS  KL+S+++ RE++VRD  R+HHF  G CSC D
Sbjct: 611 GFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKD 670

Query: 834 YW 835
           +W
Sbjct: 671 FW 672



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 235/487 (48%), Gaps = 60/487 (12%)

Query: 81  HGLVLKCGYDSTDFIVNSLVAMYA-----KCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
           H L+L+ G+    +I  SLV  YA     +   F  + ++FD +  K +V LWN +I   
Sbjct: 54  HALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFV-RKPNVFLWNCMIKVC 112

Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
             + +  +A+ L+ EM       N YT+ A L+AC D+     G+++HA  VK G     
Sbjct: 113 IENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDG 172

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           ++ ++ I MYA  G++ EA  +L     + D+V WN+M+ G++                 
Sbjct: 173 HILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYL----------------- 215

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
                             R G +   +EL      +  +S     N ++  +++C  V  
Sbjct: 216 ------------------RFGEVEAARELFEGMPDRSMISTW---NAMISGFSRCGMVEV 254

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
               F +M  +D ISW+ +I GY Q  C ++ALE+F  +Q E +     ++ SVL AC+ 
Sbjct: 255 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 314

Query: 375 LKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L  + Q + IH Y  R  +  D V+  ++VD+Y KCG ID +  VFE + +K+V SW +M
Sbjct: 315 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 374

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           I     +G A +A++LF  M   ++  + IT V  L+A +   +++KG  +    +RK +
Sbjct: 375 IGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNS-MRKEY 430

Query: 494 NLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMINANGLHGR------- 543
            +E  +     +VD+  R G L  A KV + + T+    +W +++ A   HG        
Sbjct: 431 GVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERV 490

Query: 544 GKVAIDL 550
           GK+ ++L
Sbjct: 491 GKILLEL 497



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 204/441 (46%), Gaps = 72/441 (16%)

Query: 13  QLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           ++FD V +  VF WN M+   + N EP + +  Y  M V     + +T+P V+KAC+   
Sbjct: 92  RVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAG 151

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
            +  G ++H  ++K G      I++S + MYA      +AR++ D  G + D V WN++I
Sbjct: 152 VVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMI 211

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
             Y   G+   A  LF  M    +++                                  
Sbjct: 212 DGYLRFGEVEAARELFEGMPDRSMIS---------------------------------- 237

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
                 NA+I+ ++RCG +  A     +++ +D +SW++M+ G++Q   + +A++ F ++
Sbjct: 238 ----TWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQM 293

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
           Q    +P +    + +SA   LG L  G+ +H YA +     D  +G +L+DMYAKC  +
Sbjct: 294 QKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRI 353

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
           +    VF +M+ ++  SW  +I G A +     A++LF  + +     ++  +G VL AC
Sbjct: 354 DLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDIN--PNEITFVG-VLNAC 410

Query: 373 SGLKCMSQTKEIHGYIIRKGLSDLVILNA----------------IVDVYGKCGNIDYSR 416
           +           HG +++KGL+   I N+                IVD+ G+ G +  + 
Sbjct: 411 A-----------HGGLVQKGLT---IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE 456

Query: 417 NVFESIESKDVVS-WTSMISS 436
            V  SI ++   + W +++ +
Sbjct: 457 KVVSSIPTEPTPAVWGALLGA 477



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 6/234 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           + +CG V  A + FD++ +R   +W+AM+  Y+  G  +  LE + +M+   I    F  
Sbjct: 246 FSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVL 305

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
           P V+ ACA L  LD G  IH    +        +  SLV MYAKC     A ++F++M  
Sbjct: 306 PSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN 365

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           KE V  WN++I   +  G+  +A+ LF +M    +  N  TFV  L AC        G+ 
Sbjct: 366 KE-VSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLT 421

Query: 182 IHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
           I  +  K  G   Q+     ++ +  R G +TEA  V+  +  + + + W ++L
Sbjct: 422 IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALL 475



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 18/274 (6%)

Query: 378 MSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDY-----SRNVFESIESKDVVSWT 431
           +   K+ H  I+R G L D  I  ++V  Y       Y     S  VF+ +   +V  W 
Sbjct: 47  LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 106

Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
            MI   + N    +A+ L+Y M  A+   +  T  + L A S   ++ +G +++  +++ 
Sbjct: 107 CMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKH 166

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDL 550
           G   +G + SS + MYA  G L  A ++ +    + D + W +MI+     G  + A +L
Sbjct: 167 GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAREL 226

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLG 610
           F  M   S      T+ A++   S  G++   ++F + M+   ++      ++ ++D   
Sbjct: 227 FEGMPDRSMIS---TWNAMISGFSRCGMVEVAREFFDEMKERDEIS-----WSAMIDGYI 278

Query: 611 RANHLEEAYQFVRSMQ---IEPTAEVWCALLGAC 641
           +     EA +    MQ   I P   V  ++L AC
Sbjct: 279 QEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC 312



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 3/69 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F+K+S + V +WNAM+G    +G     ++ +S+M    I+ +  T
Sbjct: 346 MYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEIT 402

Query: 61  FPCVIKACA 69
           F  V+ ACA
Sbjct: 403 FVGVLNACA 411


>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
 gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/592 (37%), Positives = 349/592 (58%), Gaps = 35/592 (5%)

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
           LN K++HA  +K G      + NTL+D Y KC  +     +F +M  +D +SW +I+  Y
Sbjct: 19  LNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAY 78

Query: 338 AQNNCHLKALELFRTV-QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG-YIIRKGLSD 395
            Q     K L +F  +   + L  D  +  ++L AC+ L  +   K++H  +++   + D
Sbjct: 79  NQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDD 138

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF----- 450
            V+ +++VD+Y KCG    +R+VF+SI  K  VSWT+M+S Y  +GL +EA+ELF     
Sbjct: 139 DVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPV 198

Query: 451 -----------------------YLMNEANVES----DSITLVSALSAASSLSILKKGKE 483
                                  Y+  E   E     D + L S + A ++L++L  GK+
Sbjct: 199 RNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQ 258

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++G +I  G+     ++++LVDMYA+C  +  A  VFN +  +D++ WTS+I     HGR
Sbjct: 259 IHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGR 318

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
            K A+DL+ +M      P+ +TF+ L+YACSH+GL+++G+K  + M  DY++ P  + + 
Sbjct: 319 AKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFT 378

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C +DLL R+ HL EA   +++M  +P    W ALL AC+ H N E+G  +A +LL L+  
Sbjct: 379 CFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMH 438

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
            P  YVL+SNV+A + KW+ + +VR  M    +K+ PG S I++G +   F A +  H  
Sbjct: 439 EPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPM 498

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
            DEI+  L E+  ++ R+ GY+  T +VLH++EE+EK + L+ HSER A+AYG+LK+  G
Sbjct: 499 KDEIFGLLKELDAEM-RKRGYIPDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKAVPG 557

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++IRI KNLR+C DCH+F KL S +  +E++VRDA R+HHF+ G CSC D+W
Sbjct: 558 TVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCNDFW 609



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 214/424 (50%), Gaps = 38/424 (8%)

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           +++  L+ C          +IHA  VKSG N    + N L+  Y +C  + +A  +  ++
Sbjct: 4   SYLHRLKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEM 63

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNG 280
             +D VSW S+LT + Q  L  K +  F  +    + +PD       + A   L +L  G
Sbjct: 64  PQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLG 123

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K++HA  +   FV D  + ++L+DMYAKC   +    VF  +  +  +SWT +++GYA++
Sbjct: 124 KQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARS 183

Query: 341 NCHLKALELF-RT------------------------------VQLEGLD-ADVMIIGSV 368
               +A+ELF RT                              ++ EG+D  D +++ SV
Sbjct: 184 GLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSV 243

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           + AC+ L  +   K+IHG +I  G  S L I NA+VD+Y KC +I  +RNVF  +  +DV
Sbjct: 244 VGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDV 303

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           VSWTS+I     +G A EAL+L+  M  A ++ + +T V  + A S   ++ KG++L   
Sbjct: 304 VSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKA 363

Query: 488 IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRG 544
           +I + + +  S+   +  +D+ +R G L+ A  +   +  K D   W ++++A   HG  
Sbjct: 364 MI-EDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNT 422

Query: 545 KVAI 548
           ++ +
Sbjct: 423 EMGV 426



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 192/399 (48%), Gaps = 37/399 (9%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           KIH  ++K G +    + N+L+  Y KC   + A  LFD M ++ D V W SI++AY+ +
Sbjct: 23  KIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQR-DHVSWASILTAYNQA 81

Query: 139 GQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
               + L +F  M     L  + + +   L+AC       LG ++HA  V S       V
Sbjct: 82  KLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVV 141

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR------- 250
            ++L+ MYA+CG  + A  V   +  K SVSW +ML+G+ ++ L  +AM+ F        
Sbjct: 142 KSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNL 201

Query: 251 ------------------------ELQGAGQK-PDQVCTVNAVSASGRLGNLLNGKELHA 285
                                   E++  G    D +   + V A   L  L  GK++H 
Sbjct: 202 YSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHG 261

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
             I  G+ S L I N L+DMYAKC  +     VF +M  +D +SWT+II G AQ+    +
Sbjct: 262 LVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKE 321

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIV 403
           AL+L+  + L  +  + +    ++ ACS    +S+ +++   +I   +    L +    +
Sbjct: 322 ALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFL 381

Query: 404 DVYGKCGNIDYSRNVFESIESK-DVVSWTSMISSYVHNG 441
           D+  + G+++ + ++ +++  K D  +W +++S+  H+G
Sbjct: 382 DLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHG 420



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 174/369 (47%), Gaps = 34/369 (9%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFT 60
           YGKC  + DA  LFD++ QR   +W ++L AY     P + L  +  M     +  D F 
Sbjct: 47  YGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFV 106

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD--- 117
           +  ++KACA L  L  G ++H   +   +   D + +SLV MYAKC     AR +FD   
Sbjct: 107 YATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSIL 166

Query: 118 ---------------RMGEKEDVV------------LWNSIISAYSASGQCLEALGLFRE 150
                          R G K++ +             W ++IS    SG C++   +F E
Sbjct: 167 VKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIE 226

Query: 151 MQRVGL-VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           M+R G+ + +     + + AC + +   LG +IH   + SG    ++++NAL+ MYA+C 
Sbjct: 227 MRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCS 286

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            +  A  V  ++ ++D VSW S++ G  Q+    +A+  + ++  A  KP++V  V  + 
Sbjct: 287 DILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIY 346

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSD-LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DF 327
           A    G +  G++L    I+   +S  LQ+    +D+ ++   +N    +   M  + D 
Sbjct: 347 ACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDE 406

Query: 328 ISWTTIIAG 336
            +W  +++ 
Sbjct: 407 PTWAALLSA 415



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 130/271 (47%), Gaps = 39/271 (14%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG-----------EPLRVLETYS-- 47
           MY KCG    A  +FD +  +T  +W AML  Y  +G            P+R L +++  
Sbjct: 148 MYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTAL 207

Query: 48  ------------------RMRVLGIS-VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
                              MR  G+  VD      V+ ACA L  L  G +IHGLV+  G
Sbjct: 208 ISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSG 267

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
           Y+S  FI N+LV MYAKC D   AR +F+RM  + DVV W SII   +  G+  EAL L+
Sbjct: 268 YESCLFISNALVDMYAKCSDILAARNVFNRMLHR-DVVSWTSIIVGAAQHGRAKEALDLY 326

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS---GQNLQVYVANALIAMY 205
            +M    +  N  TFV  + AC  +   + G ++  A ++      +LQ++     + + 
Sbjct: 327 DQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLF--TCFLDLL 384

Query: 206 ARCGKMTEAAGVLYQLENK-DSVSWNSMLTG 235
           +R G + EA  ++  + +K D  +W ++L+ 
Sbjct: 385 SRSGHLNEAEDLIKTMPHKPDEPTWAALLSA 415



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 1/140 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +L A  +F+++  R V +W +++     +G     L+ Y +M +  I  +  T
Sbjct: 281 MYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVT 340

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF-IVNSLVAMYAKCYDFRKARQLFDRM 119
           F  +I AC+    +  G K+   +++    S    +    + + ++     +A  L   M
Sbjct: 341 FVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTM 400

Query: 120 GEKEDVVLWNSIISAYSASG 139
             K D   W +++SA    G
Sbjct: 401 PHKPDEPTWAALLSACKHHG 420


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/561 (39%), Positives = 342/561 (60%), Gaps = 2/561 (0%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +LL GK  H  AI  G V+D    N L+++Y KC   +   RVF  M+ +  ISW T+IA
Sbjct: 71  SLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIA 130

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-S 394
           GY  N   ++AL+LF  +  EG       + S L AC+    + + K++H   I+  L S
Sbjct: 131 GYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDS 190

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
              +  A +DVY KC  I  +  VFE++  K  V+W+S+ + +V NGL  E L LF    
Sbjct: 191 SSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQ 250

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              ++    T+ S LS  +SL+++ +G +++  I++ GF+    VA+SLVD+YA+CG ++
Sbjct: 251 REGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIE 310

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            + +VF  ++ K+++LW +MI +   H     A+ LF KM+     P+ +T+L++L ACS
Sbjct: 311 KSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACS 370

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           H+GL+ EG+ +  ++  D   +P   HY+C+VD+LGR+   +EA++ +  M  EPTA +W
Sbjct: 371 HTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMW 430

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            +LLG+ R+H N  L  I A++L  L+P N GN+VL+SNV+AAS  W++V   R  +R S
Sbjct: 431 GSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDS 490

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           G KK  G SWIE   KIH F+A ++ H    ++Y KL EI  ++ R+  + A TQ  LH+
Sbjct: 491 GAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEM-RKISHRANTQCDLHD 549

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           V  ++K ++L  HSE+LA A+G++       I I KNLR+C DCHSF K+VS +  R+++
Sbjct: 550 VHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCHSFMKIVSCITERQVI 609

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           VRD NRFHHF+ G CSCGD+W
Sbjct: 610 VRDINRFHHFKDGSCSCGDFW 630



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 211/425 (49%), Gaps = 10/425 (2%)

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           + + +T    LQ C       +G   H   +  G        N LI +Y +CG+   A  
Sbjct: 53  LIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARR 112

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V   +  +  +SWN+M+ G+  N    +A++ F  +   G +  +    + + A      
Sbjct: 113 VFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYA 172

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           ++  K+LH  AIK    S   +G   +D+YAKC  +     VF  M  +  ++W+++ AG
Sbjct: 173 IIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAG 232

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-D 395
           + QN  H + L LF++ Q EG+      + S+L  C+ L  + +  ++H  I++ G   +
Sbjct: 233 FVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRN 292

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           L +  ++VDVY KCG I+ S  VF  +E K+VV W +MI+S+  +  + EA+ LF  M +
Sbjct: 293 LFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQ 352

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGAL 513
             +  + +T +S LSA S   ++++G+     ++      E +V   S +VD+  R G  
Sbjct: 353 VGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDR-TAEPNVLHYSCMVDVLGRSGKT 411

Query: 514 DIANKVFNCVQTKDLI-LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLAL 569
           D A K+ + +  +    +W S++ ++ +H      ++A +  +++E E+   +H+  L+ 
Sbjct: 412 DEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPEN-GGNHV-LLSN 469

Query: 570 LYACS 574
           +YA S
Sbjct: 470 VYAAS 474



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 209/424 (49%), Gaps = 9/424 (2%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D FT   +++ CA  + L  G   HGL +  G  +     N L+ +Y KC     AR++
Sbjct: 54  IDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRV 113

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M  +  ++ WN++I+ Y+ + + +EAL LF  M R G     +T  + L AC     
Sbjct: 114 FDAMSVR-SIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYA 172

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                ++H   +K   +   +V  A + +YA+C  + +A  V   +  K SV+W+S+  G
Sbjct: 173 IIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAG 232

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           FVQN L+ + +  F+  Q  G +  +    + +S    L  ++ G ++HA  +K GF  +
Sbjct: 233 FVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRN 292

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           L +  +L+D+YAKC  +     VF  M  ++ + W  +IA ++++    +A+ LF  +Q 
Sbjct: 293 LFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQ 352

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKCGNID 413
            G+  + +   S+L ACS    + + +     ++  R    +++  + +VDV G+ G  D
Sbjct: 353 VGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTD 412

Query: 414 YSRNVFESIESKDVVS-WTSMI-SSYVHNG--LANEALELFYLMNEANVESDSITLVSAL 469
            +  + + +  +   S W S++ SS +H    LA  A E  + +   N    +  L+S +
Sbjct: 413 EAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPEN--GGNHVLLSNV 470

Query: 470 SAAS 473
            AAS
Sbjct: 471 YAAS 474



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 150/282 (53%), Gaps = 1/282 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG    A ++FD +S R++ +WN M+  Y  N E +  L+ +SRM   G  +  FT
Sbjct: 100 LYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFT 159

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + ACA    +    ++H + +K   DS+ F+  + + +YAKC   + A  +F+ M 
Sbjct: 160 LSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP 219

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK  V  W+S+ + +  +G   E L LF+  QR G+    +T  + L  C   +    G 
Sbjct: 220 EKTSVT-WSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGT 278

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  VK G +  ++VA +L+ +YA+CG++ ++  V   +E K+ V WN+M+  F ++ 
Sbjct: 279 QVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHA 338

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
              +AM  F ++Q  G  P++V  ++ +SA    G +  G+ 
Sbjct: 339 HSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRH 380



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 7/190 (3%)

Query: 454 NEANVESDSI---TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
           N   VE D I   TL   L   +    L  GK  +G  I  G   +    + L+++Y +C
Sbjct: 45  NLVRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKC 104

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV-AIDLFYKMEAESFAPDHITFLAL 569
           G  D A +VF+ +  + +I W +MI A   H R  V A+ LF +M  E       T  + 
Sbjct: 105 GQNDCARRVFDAMSVRSIISWNTMI-AGYTHNREDVEALKLFSRMHREGTQMTEFTLSST 163

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           L AC+    I E K+ L  +     LD         +D+  + N +++A     +M  E 
Sbjct: 164 LCACAAKYAIIECKQ-LHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP-EK 221

Query: 630 TAEVWCALLG 639
           T+  W +L  
Sbjct: 222 TSVTWSSLFA 231



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/135 (20%), Positives = 65/135 (48%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  + ++F  + ++ V  WNAM+ ++  +      +  + +M+ +GI  +  T
Sbjct: 302 VYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVT 361

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-LVAMYAKCYDFRKARQLFDRM 119
           +  ++ AC+    ++ G     L+L       + +  S +V +  +     +A +L D+M
Sbjct: 362 YLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKM 421

Query: 120 GEKEDVVLWNSIISA 134
             +    +W S++ +
Sbjct: 422 PFEPTASMWGSLLGS 436


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/691 (34%), Positives = 383/691 (55%), Gaps = 38/691 (5%)

Query: 182 IHAATVKSGQNLQVYVANALIA---MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           IHA  +K G +   Y  + LI    +      +  A  V   ++  + + WN+M  G   
Sbjct: 52  IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A++ +  +   G  P+       + +  +      G+++H + +K G   DL +
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171

Query: 299 GNTLMDMYAKCC----------------CVNYMG---------------RVFYQMTAQDF 327
             +L+ MY +                   V+Y                 ++F ++  +D 
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW  +I+GYA+   + +ALELF+ +    +  D   + +V+ AC+    +   +++H +
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           I   G  S+L I+NA++D+Y KCG ++ +  +FE +  KDV+SW ++I  Y H  L  EA
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR--KGFNLEGSVASSLV 504
           L LF  M  +    + +T++S L A + L  +  G+ ++ +I +  KG     S+ +SL+
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 411

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMYA+CG ++ A++VFN +  K L  W +MI    +HGR   + DLF +M      PD I
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF+ LL ACSHSG+++ G+     M  DY++ P  EHY C++DLLG +   +EA + +  
Sbjct: 472 TFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 531

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M++EP   +WC+LL AC++H N ELGE  A+ L++++P NPG+YVL+SN++A++ +W +V
Sbjct: 532 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 591

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            + R  +   G+KK PG S IEI + +H FI  DK H  + EIY  L E+   LE+  G+
Sbjct: 592 AKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK-AGF 650

Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
           V  T  VL  +EEE K   L  HSE+LAIA+G++ +  G+ + I KNLRVC +CH   KL
Sbjct: 651 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 710

Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +S+++ RE++ RD  RFHHF  GVCSC DYW
Sbjct: 711 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 150/552 (27%), Positives = 276/552 (50%), Gaps = 50/552 (9%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK---ARQLFDRMG 120
           ++  C  L+ L     IH  ++K G  +T++ ++ L+        F     A  +F  + 
Sbjct: 39  LLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  ++++WN++   ++ S   + AL L+  M  +GL+ N+YTF   L++C  S     G 
Sbjct: 96  EP-NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ-------------------- 220
           +IH   +K G +L +YV  +LI+MY + G++ +A  V  +                    
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214

Query: 221 -LEN----------KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            +EN          KD VSWN+M++G+ +   Y +A++ F+++     +PD+   V  VS
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A  + G++  G+++H +    GF S+L+I N L+D+Y+KC  +     +F ++  +D IS
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W T+I GY   N + +AL LF+ +   G   + + + S+L AC+ L  +   + IH YI 
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394

Query: 390 R--KGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           +  KG+++   L  +++D+Y KCG+I+ +  VF SI  K + SW +MI  +  +G A+ +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLV 504
            +LF  M +  ++ D IT V  LSA S   +L  G+ +    + + + +   +     ++
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR-TMTQDYKMTPKLEHYGCMI 513

Query: 505 DMYARCGALD-IANKVFNCVQTKDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFA 560
           D+    G        +       D ++W S++ A  +HG    G+   +   K+E E+  
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN-- 571

Query: 561 PDHITFLALLYA 572
           P     L+ +YA
Sbjct: 572 PGSYVLLSNIYA 583



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 198/395 (50%), Gaps = 32/395 (8%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F  + +  +  WN M   +  + +P+  L+ Y  M  LG+  +++TFP V+K+CA 
Sbjct: 87  AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------- 123
            K    G +IHG VLK G D   ++  SL++MY +      A ++FD+   ++       
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206

Query: 124 -----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
                                  DVV WN++IS Y+ +G   EAL LF++M +  +  + 
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            T V  + AC  S    LG ++H      G    + + NALI +Y++CG++  A G+  +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           L  KD +SWN+++ G+   +LY +A+  F+E+  +G+ P+ V  ++ + A   LG +  G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386

Query: 281 KELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           + +H Y  K  +G  +   +  +L+DMYAKC  +    +VF  +  +   SW  +I G+A
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
            +     + +LF  ++  G+  D +    +L ACS
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 139/284 (48%), Gaps = 3/284 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G + +A++LFD++  + V +WNAM+  Y   G     LE +  M    +  D  T 
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA    ++ G ++H  +   G+ S   IVN+L+ +Y+KC +   A  LF+R+  
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN++I  Y+      EAL LF+EM R G   N  T ++ L AC       +G  
Sbjct: 330 K-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388

Query: 182 IHAATVK--SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           IH    K   G      +  +LI MYA+CG +  A  V   + +K   SWN+M+ GF  +
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
                +   F  ++  G +PD +  V  +SA    G L  G+ +
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 3/184 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  A  LF+++  + V +WN ++G Y         L  +  M   G + +  T
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++ ACA L  +D G  IH  + K   G  +   +  SL+ MYAKC D   A Q+F+ 
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           +  K  +  WN++I  ++  G+   +  LF  M+++G+  +  TFV  L AC  S    L
Sbjct: 430 ILHKS-LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488

Query: 179 GMEI 182
           G  I
Sbjct: 489 GRHI 492



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 126/290 (43%), Gaps = 23/290 (7%)

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
           + + +    +L + ++   DSI    +LS   +   L+  + ++  +I+ G +      S
Sbjct: 10  VPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALS 69

Query: 502 SLVD---MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
            L++   +      L  A  VF  +Q  +L++W +M   + L      A+ L+  M +  
Sbjct: 70  KLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG 129

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
             P+  TF  +L +C+ S    EG++    +++    LD +   +  L+ +  +   LE+
Sbjct: 130 LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV--HTSLISMYVQNGRLED 187

Query: 618 AYQ-FVRSMQIEPTAEV--WCALLG--ACRVH---SNKELGEIVAKKLLELDPGNPGNYV 669
           A++ F +S    P  +V  + AL+   A R +   + K   EI  K ++  +    G Y 
Sbjct: 188 AHKVFDKS----PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG-YA 242

Query: 670 LISNVFAASRKWKDVEQVRMRMRGSGL----KKTPGSSWIEIGNKIHSFI 715
              N   A   +KD+ +  +R   S +         S  IE+G ++H +I
Sbjct: 243 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/595 (37%), Positives = 354/595 (59%), Gaps = 33/595 (5%)

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC-------CCVNYMGR-------- 317
           +LG+L  GK++H+  I  G   D  I N L++ Y+K           + M R        
Sbjct: 74  KLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNI 133

Query: 318 ----------------VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
                           +F +M+ ++  +W  +IAG  Q   + +AL LF+ +   G   D
Sbjct: 134 LINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPD 193

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE 420
              +GSVL  C+GL+ +   +E+H  +++ G     V+ +++  +Y K G++     + +
Sbjct: 194 EFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIK 253

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
           S+  + VV+W ++I+    NG   E L  + +M  A    D IT VS LSA S L+ L +
Sbjct: 254 SMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQ 313

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
           G++++  +I+ G +   +V SSL+ MY+R G L+ + K F   +  D++LW+SMI A G 
Sbjct: 314 GQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGF 373

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HGRG+ A++LF++ME      + +TFL+LLYACSHSGL  +G ++ ++M   Y+L P  E
Sbjct: 374 HGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIE 433

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY C+VDLLGRA  LEEA   +RSM ++P   +W  LL AC++H   E+ E +++++++L
Sbjct: 434 HYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKL 493

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           DP +  +YVL+SN+ A++R W +V Q+R  MR   ++K PG SW+E+ N +H F   DKS
Sbjct: 494 DPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKS 553

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H +  EI   L E+  +L ++ GYV +   VLH+++ EEK   L  HSE+ AIA+ ++ +
Sbjct: 554 HPQYFEIDLYLKELMSEL-KQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNT 612

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +E   IR+ KNLRVC DCH+  K +SR+  RE++VRDA+RFHHF+ G CSCG+YW
Sbjct: 613 SENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 197/414 (47%), Gaps = 35/414 (8%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK----- 111
           D   F  ++++C  L  L  G ++H L++  G     FI N L+  Y+K   F+      
Sbjct: 61  DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120

Query: 112 --------------------------ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
                                     A++LFD M E+ ++  WN++I+  +      +AL
Sbjct: 121 SNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSER-NIATWNAMIAGLTQFEFNKQAL 179

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
            LF+EM  +G + + +T  + L+ C        G E+HA  +K G  L   V ++L  MY
Sbjct: 180 SLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMY 239

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
            + G +++   ++  +  +  V+WN+++ G  QN    + +  +  ++ AG +PD++  V
Sbjct: 240 IKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFV 299

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
           + +SA   L  L  G+++HA  IK G  S L + ++L+ MY++  C+    + F      
Sbjct: 300 SVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENF 359

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           D + W+++IA Y  +    +ALELF  ++   ++A+ +   S+L ACS      +  E  
Sbjct: 360 DVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYF 419

Query: 386 GYIIRKGLSDLVI--LNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
             +++K      I     +VD+ G+ G ++ +  +  S+    D + W +++++
Sbjct: 420 DLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAA 473



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 167/345 (48%), Gaps = 19/345 (5%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +  A++LFD++S+R + TWNAM+          + L  +  M  LG   D FT 
Sbjct: 138 YLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTL 197

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V++ CA L+ L  G ++H  +LKCG++ +  + +SL  MY K        +L   M  
Sbjct: 198 GSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPI 257

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           +  VV WN++I+  + +G   E L  +  M+  G   +  TFV+ L AC + +    G +
Sbjct: 258 R-TVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQ 316

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IHA  +K+G +  + V ++LI+MY+R G + ++       EN D V W+SM+  +  +  
Sbjct: 317 IHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGR 376

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A++ F +++    + ++V  ++ + A    G    G E     +K+  +        
Sbjct: 377 GEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKL------KP 430

Query: 302 LMDMYAKCCCVNYMGR---------VFYQMTAQ-DFISWTTIIAG 336
            ++ Y   C V+ +GR         +   M  Q D I W T++A 
Sbjct: 431 RIEHYT--CVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAA 473



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 125/238 (52%), Gaps = 5/238 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K GS+ D E+L   +  RTV  WN ++     NG P  VL  Y+ M++ G   D  T
Sbjct: 238 MYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKIT 297

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF-DRM 119
           F  V+ AC+ L  L  G +IH  V+K G  S   +V+SL++MY++      + + F DR 
Sbjct: 298 FVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDR- 356

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E  DVVLW+S+I+AY   G+  EAL LF +M+ + +  N  TF++ L AC  S  +  G
Sbjct: 357 -ENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKG 415

Query: 180 MEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
            E     VK  +   ++     ++ +  R G++ EA G++  +    D + W ++L  
Sbjct: 416 TEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAA 473



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 32/257 (12%)

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
           +D  +   +L +C  L  +   K++H  II  G S D  I N +++ Y K G    S  +
Sbjct: 60  SDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVL 119

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES------------------ 460
           F ++  ++V+S+  +I+ Y+  G    A +LF  M+E N+ +                  
Sbjct: 120 FSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQAL 179

Query: 461 -------------DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
                        D  TL S L   + L  L  G+E++  +++ GF L   V SSL  MY
Sbjct: 180 SLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMY 239

Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
            + G+L    K+   +  + ++ W ++I     +G  +  ++ +  M+   F PD ITF+
Sbjct: 240 IKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFV 299

Query: 568 ALLYACSHSGLINEGKK 584
           ++L ACS    + +G++
Sbjct: 300 SVLSACSELATLGQGQQ 316


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/681 (33%), Positives = 384/681 (56%), Gaps = 10/681 (1%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
           +++H   LK G     FIV  L  +YA+      A +LF     +  V LWN+++ +Y  
Sbjct: 156 SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRT-VYLWNALLRSYCF 214

Query: 138 SGQCLEALGLFREMQRVGLVT-----NAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
            G+ +E L LFR+M  V  V+     + Y+   AL++C       LG  IH    K   +
Sbjct: 215 EGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRID 274

Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF-RE 251
             ++V +ALI +Y +CG+M +A  V  +    D V W S+++G+ Q+     A+ FF R 
Sbjct: 275 GDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRM 334

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           +      PD V  V+  SA  +L N   G+ +H +  ++G  + L + N+L+ +Y K   
Sbjct: 335 VVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGS 394

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           +     +F +M+ +D ISW+T++A YA N      L+LF  +  + +  + + + SVL A
Sbjct: 395 IKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRA 454

Query: 372 CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           C+ +  + +  +IH   +  G   +  +  A++D+Y KC + + + ++F  +  KDV++W
Sbjct: 455 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAW 514

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
             + S Y  NG+ +E++ +F  M  +    D+I LV  L+  S L IL++   L+ F+I+
Sbjct: 515 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIK 574

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
            GF     + +SL+++YA+C +++ ANKVF  +  KD++ W+S+I A G HG+G+ A+ L
Sbjct: 575 NGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKL 634

Query: 551 FYKMEAES-FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLL 609
           FY+M   S   P+++TF+++L ACSHSGLI EG    +IM   Y+L P  EHYA +VDLL
Sbjct: 635 FYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLL 694

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV 669
           GR   L+ A   + +M ++   ++W ALLGACR+H N ++GE+ AK L  LDP + G Y+
Sbjct: 695 GRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYI 754

Query: 670 LISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYK 729
           L+SN+++    W    ++R  ++   L K  G S +E+ N++ SFIA D+ H ESD IY+
Sbjct: 755 LLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYE 814

Query: 730 KLAEITEKLEREGGYVAQTQF 750
            L ++  K+ RE  +  Q Q 
Sbjct: 815 ILTKLHAKM-REVAFDPQVQI 834



 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 174/585 (29%), Positives = 302/585 (51%), Gaps = 23/585 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISV--- 56
           +Y +  S+  A +LF +   RTV+ WNA+L +Y   GE +  L  + +M  V  +S+   
Sbjct: 180 LYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEER 239

Query: 57  -DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            D ++    +K+CA L+ L  G  IHG + K   D   F+ ++L+ +Y KC     A ++
Sbjct: 240 PDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKV 299

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSS 174
           F     K DVVLW SIIS Y  SG    AL  F  M     V+ +  T V+   AC   S
Sbjct: 300 FMEY-PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLS 358

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
              LG  +H    + G + ++ +AN+L+ +Y + G +  A+ +  ++ +KD +SW++M+ 
Sbjct: 359 NFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVA 418

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
            +  N      +  F E+     KP+ V  V+ + A   + NL  G ++H  A+  GF  
Sbjct: 419 CYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEM 478

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           +  +   LMDMY KC        +F +M  +D I+W  + +GYA N    +++ +FR + 
Sbjct: 479 ETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNML 538

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNID 413
             G   D + +  +L   S L  + Q   +H ++I+ G  +   + A +++VY KC +I+
Sbjct: 539 SSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIE 598

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM-NEANVESDSITLVSALSAA 472
            +  VF+ +  KDVV+W+S+I++Y  +G   EAL+LFY M N ++ + +++T +S LSA 
Sbjct: 599 DANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSAC 658

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLI 529
           S   ++K+G  +   ++ K + L+ +    + +VD+  R G LD+A  V N +  +    
Sbjct: 659 SHSGLIKEGINMFDIMVNK-YKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPD 717

Query: 530 LWTSMINANGLHGRGKV----AIDLFYKMEAESFAPDHITFLALL 570
           +W +++ A  +H   K+    A +LF      S  P+H  +  LL
Sbjct: 718 IWGALLGACRIHQNIKMGEVAAKNLF------SLDPNHAGYYILL 756



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 168/319 (52%), Gaps = 9/319 (2%)

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
           L+  +LH+  +K G V D  I   L  +YA+   +++  ++F +   +    W  ++  Y
Sbjct: 153 LSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSY 212

Query: 338 AQNNCHLKALELFR------TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
                 ++ L LFR      +V +E    D   +   L +C+GL+ +   K IHG++ + 
Sbjct: 213 CFEGEWVETLSLFRQMNNVSSVSIEE-RPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKV 271

Query: 392 GLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
            +  D+ + +A++D+Y KCG ++ +  VF      DVV WTS+IS Y  +G    AL  F
Sbjct: 272 RIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFF 331

Query: 451 YLM-NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
             M     V  D +TLVS  SA + LS  K G+ ++GF+ RKG + +  +A+SL+ +Y +
Sbjct: 332 SRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGK 391

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
            G++  A+ +F  +  KD+I W++M+     +G     +DLF +M  +   P+ +T +++
Sbjct: 392 TGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSV 451

Query: 570 LYACSHSGLINEGKKFLEI 588
           L AC+    + EG K  E+
Sbjct: 452 LRACACISNLEEGMKIHEL 470


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/608 (36%), Positives = 356/608 (58%), Gaps = 2/608 (0%)

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           +N+++ GFV N L+ + +  F  ++  G           + A  R  N   G +LH+  +
Sbjct: 79  YNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVV 138

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K GF  D+    +L+ +Y+    +N   +VF ++  +  ++WT + +GY     H +A++
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAID 198

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYG 407
           LF+ +   G+  D   I  VL AC  +  +   + I  ++    +  +  +   +V++Y 
Sbjct: 199 LFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYA 258

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           KCG ++ +R+VF+S+  KD+V+W++MI  Y  N    E +E F  M + N++ D  ++V 
Sbjct: 259 KCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVG 318

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            LS+ +SL  L  G+     I R  F     +A++L+DMYA+CGA+    +VF  ++ KD
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           +++  + I+    +G  K++  +F + E    +PD  TFL LL  C H+GLI +G +F  
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
            + C Y L    EHY C+VDL GRA  L++AY+ +  M + P A VW ALL  CR+  + 
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDT 498

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           +L E V K+L+ L+P N GNYV +SN+++ S +W +  +VR  M   G+KK PG SWIE+
Sbjct: 499 QLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIEL 558

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGH 767
              +H F+A DKSH  SD+IY KL ++  ++ R  G+V  T+FV  +VE+EEK ++L  H
Sbjct: 559 EGTVHEFLADDKSHPLSDKIYAKLEDLGNEM-RLMGFVPTTEFVFFDVEDEEKERVLGHH 617

Query: 768 SERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
           SE+LA+A+G++ +  G +IR+ KNLRVC DCH   KL+S++  RE+VVRD NRFH F  G
Sbjct: 618 SEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNG 677

Query: 828 VCSCGDYW 835
            CSC DYW
Sbjct: 678 SCSCNDYW 685



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 219/451 (48%), Gaps = 56/451 (12%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           LF       +F +N ++  +V+N      L+ +  +R  G+++  FTFP V+KAC    +
Sbjct: 67  LFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
              G  +H LV+KCG++     + SL+++Y+       A ++F+ + E+  VV W ++ S
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERS-VVTWTALFS 185

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
            Y+ +G+  EA+ LF++M  +G+  ++Y  V  L AC           +H   + SG+ +
Sbjct: 186 GYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSAC-----------VHVGDLDSGEWI 234

Query: 194 -----------QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
                        +V   L+ +YA+CGKM +A  V   +  KD V+W++M+ G+  N   
Sbjct: 235 VKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFP 294

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            + ++FF ++     KPDQ   V  +S+   LG L  G+   +   +  F+++L + N L
Sbjct: 295 KEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-ALELFRTVQLEGLDAD 361
           +DMYAKC  +     VF +M  +D +     I+G A+N  H+K +  +F   +  G+  D
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNG-HVKLSFAVFGQTEKLGISPD 413

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI----------------VDV 405
               GS  +   GL C      +H  +I+ GL      NAI                VD+
Sbjct: 414 ----GSTFL---GLLCGC----VHAGLIQDGLR---FFNAISCVYALKRTVEHYGCMVDL 459

Query: 406 YGKCGNIDYS-RNVFESIESKDVVSWTSMIS 435
           +G+ G +D + R + +     + + W +++S
Sbjct: 460 WGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 218/449 (48%), Gaps = 8/449 (1%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKE--DVVLWNSIISAYSASGQCLEALGLFREM 151
           F+VN L+    +   FR+    F      +  ++ L+N++I+ +  +    E L LF  +
Sbjct: 46  FLVNLLLK---RTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSI 102

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
           ++ GL  + +TF   L+AC  +S   LG+++H+  VK G N  V    +L+++Y+  G++
Sbjct: 103 RKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL 162

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
            +A  V  ++  +  V+W ++ +G+     + +A+  F+++   G +PD    V  +SA 
Sbjct: 163 NDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSAC 222

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             +G+L +G+ +  +  +     +  +  TL+++YAKC  +     VF  M  +D ++W+
Sbjct: 223 VHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWS 282

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR- 390
           T+I GYA N+   + +E F  +  E L  D   I   L +C+ L  +   +     I R 
Sbjct: 283 TMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRH 342

Query: 391 KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           + L++L + NA++D+Y KCG +     VF+ ++ KD+V   + IS    NG    +  +F
Sbjct: 343 EFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF 402

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYAR 509
               +  +  D  T +  L       +++ G +  N                 +VD++ R
Sbjct: 403 GQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGR 462

Query: 510 CGALDIANKVF-NCVQTKDLILWTSMINA 537
            G LD A ++  +     + I+W ++++ 
Sbjct: 463 AGMLDDAYRLICDMPMRPNAIVWGALLSG 491



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 136/261 (52%), Gaps = 3/261 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   G + DA ++F+++ +R+V TW A+   Y + G+    ++ + +M  +G+  D++ 
Sbjct: 155 IYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYF 214

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  + DLD G  I   + +       F+  +LV +YAKC    KAR +FD MG
Sbjct: 215 IVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMG 274

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK D+V W+++I  Y+++    E +  F +M +  L  + ++ V  L +C       LG 
Sbjct: 275 EK-DIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLG- 332

Query: 181 EIHAATVKSGQNL-QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           E   + +   + L  +++ANALI MYA+CG M     V  +++ KD V  N+ ++G  +N
Sbjct: 333 EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKN 392

Query: 240 DLYCKAMQFFRELQGAGQKPD 260
                +   F + +  G  PD
Sbjct: 393 GHVKLSFAVFGQTEKLGISPD 413



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 146/304 (48%), Gaps = 1/304 (0%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K++H   I      D  + N L+         +Y   +F      +   + T+I G+  N
Sbjct: 30  KQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNN 89

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVIL 399
           +   + L+LF +++  GL+        VL AC+         ++H  +++ G + D+  +
Sbjct: 90  HLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAM 149

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
            +++ +Y   G ++ +  VFE I  + VV+WT++ S Y   G   EA++LF  M E  V 
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            DS  +V  LSA   +  L  G+ +   +          V ++LV++YA+CG ++ A  V
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F+ +  KD++ W++MI     +   K  I+ F +M  E+  PD  + +  L +C+  G +
Sbjct: 270 FDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGAL 329

Query: 580 NEGK 583
           + G+
Sbjct: 330 DLGE 333



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 126/261 (48%), Gaps = 3/261 (1%)

Query: 379 SQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
           +  K++H  +I   L  D  ++N ++          YS  +F   +  ++  + ++I+ +
Sbjct: 27  NHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGF 86

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           V+N L +E L+LF  + +  +     T    L A +  S  K G +L+  +++ GFN + 
Sbjct: 87  VNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDV 146

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
           +  +SL+ +Y+  G L+ A+KVF  +  + ++ WT++ +     G+ + AIDLF KM   
Sbjct: 147 AAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEM 206

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              PD    + +L AC H G ++ G+  ++ M  + ++         LV+L  +   +E+
Sbjct: 207 GVRPDSYFIVQVLSACVHVGDLDSGEWIVKHME-EMEMQKNSFVRTTLVNLYAKCGKMEK 265

Query: 618 AYQFVRSMQIEPTAEVWCALL 638
           A     SM  E     W  ++
Sbjct: 266 ARSVFDSMG-EKDIVTWSTMI 285


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/638 (35%), Positives = 364/638 (57%), Gaps = 36/638 (5%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           NA++++YA+ G + +   +   + ++DSVS+N++++GF  N     A+  F  +Q  G K
Sbjct: 93  NAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLK 152

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P +   V+ ++A  +L +L  GK++H   I      ++ + N L D+YA+C  ++   R+
Sbjct: 153 PTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRL 212

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F +M  ++ ++W  +I+GY +N    K ++LF  +Q+  L  D +   SVL A       
Sbjct: 213 FDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA------- 265

Query: 379 SQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
                                      Y + G ID +R VF  I  KD V WT MI    
Sbjct: 266 ---------------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCA 298

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NG   +AL LF  M   N   D  T+ S +S+ + L+ L  G+ ++G     G N +  
Sbjct: 299 QNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLL 358

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           V+S+LVDMY +CG    A  +F+ +QT++++ W SMI    L+G+   A+ L+  M  E+
Sbjct: 359 VSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEEN 418

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
             PD +TF+ +L AC H+GL+ EGK++   M   + L+P P+HYAC+V+L GR+ H+++A
Sbjct: 419 LKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKA 478

Query: 619 YQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
              + SM  EP + +W  +L  C +  + + GE+ A+ L+EL+P N   Y+++SN++AA 
Sbjct: 479 VDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAAR 538

Query: 679 RKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKL 738
            +WKDV  +R  M+   +KK    SWIEI N++H F+A D++H ++  I+ +L  +  KL
Sbjct: 539 GRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKL 598

Query: 739 EREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG-SLIRITKNLRVCVD 797
           + E G+   T  VLH+  E+EK++ +  HSE+LA+AYG++K   G + IRI KN+R C D
Sbjct: 599 Q-EAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCAD 657

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CH F K VS +  R +++RD+NRFHHF  G CSC DYW
Sbjct: 658 CHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 235/447 (52%), Gaps = 39/447 (8%)

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
           +F  N+++++YAK       R +FD M  + D V +N++IS ++ +G+   ALG+F  MQ
Sbjct: 89  NFSWNAMLSLYAKSGLVEDLRVIFDNMPSR-DSVSYNTVISGFAGNGRGGPALGVFLRMQ 147

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
           + GL    YT V+ L AC        G +IH   +       V+V NAL  +YARCG++ 
Sbjct: 148 KEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEID 207

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
           +A  +  ++  ++ V+WN M++G+++N    K +  F E+Q +  KPDQ      V+AS 
Sbjct: 208 QARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQ------VTASS 261

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
            LG         AY I+ G++ + +                   +VF ++  +D + WT 
Sbjct: 262 VLG---------AY-IQAGYIDEAR-------------------KVFGEIREKDEVCWTI 292

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           +I G AQN     AL LF  + LE    D   I SV+ +C+ L  +   + +HG     G
Sbjct: 293 MIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMG 352

Query: 393 LS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
           ++ DL++ +A+VD+Y KCG    +  +F ++++++VVSW SMI  Y  NG   EAL L+ 
Sbjct: 353 VNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYE 412

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARC 510
            M E N++ DS+T V  LSA     ++++GKE       + G        + +V+++ R 
Sbjct: 413 NMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRS 472

Query: 511 GALDIANKVFNCV-QTKDLILWTSMIN 536
           G +D A  + + + Q  + ++WT++++
Sbjct: 473 GHMDKAVDLISSMSQEPNSLIWTTVLS 499



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 218/475 (45%), Gaps = 70/475 (14%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG--EPLRV---------------- 42
           +Y K G +  A +LFD+++QR  F+WNAML  Y  +G  E LRV                
Sbjct: 67  LYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTV 126

Query: 43  -------------LETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                        L  + RM+  G+    +T   V+ AC  L DL  G +IHG ++ C  
Sbjct: 127 ISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNL 186

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
               F+ N+L  +YA+C +  +AR+LFDRM  + +VV WN +IS Y  + Q  + + LF 
Sbjct: 187 GGNVFVCNALTDLYARCGEIDQARRLFDRMVIR-NVVTWNLMISGYLKNRQPEKCIDLFH 245

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EMQ   L  +  T                                   A++++  Y + G
Sbjct: 246 EMQVSNLKPDQVT-----------------------------------ASSVLGAYIQAG 270

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + EA  V  ++  KD V W  M+ G  QN     A+  F E+     +PD     + VS
Sbjct: 271 YIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVS 330

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           +  +L +L +G+ +H  A   G   DL + + L+DMY KC        +F  M  ++ +S
Sbjct: 331 SCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVS 390

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W ++I GYA N   L+AL L+  +  E L  D +    VL AC     + + KE    + 
Sbjct: 391 WNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMS 450

Query: 390 -RKGLSDLVILNA-IVDVYGKCGNIDYSRNVFESI-ESKDVVSWTSMISSYVHNG 441
            + GL       A +V+++G+ G++D + ++  S+ +  + + WT+++S  V  G
Sbjct: 451 DQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKG 505



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 32/231 (13%)

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE-------- 445
           +D  I N ++++Y K G I ++R +F+ +  +D  SW +M+S Y  +GL  +        
Sbjct: 56  NDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNM 115

Query: 446 -----------------------ALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
                                  AL +F  M +  ++    T VS L+A + L  L++GK
Sbjct: 116 PSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGK 175

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
           +++G II         V ++L D+YARCG +D A ++F+ +  ++++ W  MI+    + 
Sbjct: 176 QIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNR 235

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK-FLEIMRCD 592
           + +  IDLF++M+  +  PD +T  ++L A   +G I+E +K F EI   D
Sbjct: 236 QPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKD 286



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 11/171 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG   DA  +F  +  R V +WN+M+G Y  NG+ L  L  Y  M    +  D+ T
Sbjct: 366 MYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVT 425

Query: 61  FPCVIKACAMLKDLDCGAKIH-GLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC     ++ G +    +  + G + T      +V ++ +     KA  L   M
Sbjct: 426 FVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSM 485

Query: 120 GEKEDVVLWNSIISAYSASG---------QCLEALGLFREMQRVGLVTNAY 161
            ++ + ++W +++S     G         +CL  L  F  +  + +++N Y
Sbjct: 486 SQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYI-MLSNMY 535


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/579 (37%), Positives = 360/579 (62%), Gaps = 10/579 (1%)

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIGNTL---MDMYAKCCCVNYMGRVFY 320
           +N +   G + +L   +++HA++I+ G  +SD ++G  L   +        ++Y  +VF 
Sbjct: 19  INLLQTYG-VSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFS 77

Query: 321 QMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCM 378
           ++    +   W T+I GYA+    + A+ L+R ++  G ++ D      +L A   +  +
Sbjct: 78  KIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADV 137

Query: 379 SQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
              + IH  +IR G   L+ + N+++ +Y  CG++  +  VF+ +  KD+V+W S+I+ +
Sbjct: 138 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 197

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             NG   EAL L+  M+   ++ D  T+VS LSA + +  L  GK  + ++I+ G     
Sbjct: 198 AENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNL 257

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA- 556
             ++ L+D+YARCG ++ A  +F+ +  K+ + WTS+I    ++G GK AI+LF  ME+ 
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESK 317

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
           E   P  ITF+ +LYACSH G++ EG ++   M  +Y+++P  EH+ C+VDLL RA  ++
Sbjct: 318 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVK 377

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           +AY+++  M ++P   +W  LLGAC VH + +L E+   K+L+L+P + G+YVL+SN++A
Sbjct: 378 KAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYA 437

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           + ++W DV+++R +M   G++K PG S +E+GN++H F+  DKSH ++D IY KL E+T+
Sbjct: 438 SEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTD 497

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           +L  E GYV Q   V  +VEEEEK   L  HSE++AIA+ ++ + E   IR+ KNL+VC 
Sbjct: 498 RLRLE-GYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCA 556

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCH   KLVS+++ RE+VVRD +RFHHF+ G CSC DYW
Sbjct: 557 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 201/390 (51%), Gaps = 11/390 (2%)

Query: 11  AEQLFDKVSQR-TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFTFPCVIKAC 68
           A ++F K+ +   VF WN ++  Y   G  +  +  Y  MR  G +  D  T+P ++KA 
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW 128
             + D+  G  IH +V++ G+ S  ++ NSL+ +YA C D   A ++FD+M EK D+V W
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK-DLVAW 190

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           NS+I+ ++ +G+  EAL L+ EM   G+  + +T V+ L AC      TLG   H   +K
Sbjct: 191 NSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIK 250

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
            G    ++ +N L+ +YARCG++ EA  +  ++ +K+SVSW S++ G   N L  +A++ 
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIEL 310

Query: 249 FRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN--TLMDM 305
           F+ ++   G  P ++  V  + A    G +  G E +   + + +  + +I +   ++D+
Sbjct: 311 FKNMESKEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMSEEYKIEPRIEHFGCMVDL 369

Query: 306 YAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQLEGLDADVM 363
            A+   V        +M  Q + + W T++ A     +  L  L   + +QLE   +   
Sbjct: 370 LARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDY 429

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           ++ S + A    +  S  ++I   ++R G+
Sbjct: 430 VLLSNMYASE--QRWSDVQKIRKQMLRDGV 457



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 210/426 (49%), Gaps = 37/426 (8%)

Query: 79  KIHGLVLKCGYDSTD--------FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           +IH   ++ G   +D        F + SL +     Y    A ++F ++ +  +V +WN+
Sbjct: 35  QIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSY----AHKVFSKIEKPINVFIWNT 90

Query: 131 IISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           +I  Y+  G  + A+ L+REM+  G V  + +T+   L+A    +   LG  IH+  ++S
Sbjct: 91  LIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRS 150

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G    +YV N+L+ +YA CG +  A  V  ++  KD V+WNS++ GF +N    +A+  +
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            E+   G KPD    V+ +SA  ++G L  GK  H Y IK G   +L   N L+D+YA+C
Sbjct: 211 TEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARC 270

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-LEG-LDADVMIIGS 367
             V     +F +M  ++ +SWT++I G A N    +A+ELF+ ++  EG L  ++  +G 
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVG- 329

Query: 368 VLMACSG----------LKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
           +L ACS            + MS+  +I   I   G         +VD+  + G +  +  
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFG--------CMVDLLARAGQVKKAYE 381

Query: 418 -VFESIESKDVVSWTSMISSYVHNGLAN--EALELFYLMNEANVESDSITLVSALSAASS 474
            + +     +VV W +++ +   +G ++  E   +  L  E N   D + L +  ++   
Sbjct: 382 YILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQR 441

Query: 475 LSILKK 480
            S ++K
Sbjct: 442 WSDVQK 447



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 4/236 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y  CG V  A ++FDK+ ++ +  WN+++  +  NG+P   L  Y+ M + GI  D FT
Sbjct: 165 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFT 224

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA +  L  G + H  ++K G        N L+ +YA+C    +A+ LFD M 
Sbjct: 225 IVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLG 179
           +K  V  W S+I   + +G   EA+ LF+ M+ + GL+    TFV  L AC        G
Sbjct: 285 DKNSVS-WTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEG 343

Query: 180 ME-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
            E     + +     ++     ++ + AR G++ +A   + ++  + +V  W ++L
Sbjct: 344 FEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLL 399


>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/659 (35%), Positives = 362/659 (54%), Gaps = 42/659 (6%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARC--GKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IHA   K+G +    V   L+   A      +  A  + +   N D+   N+++     
Sbjct: 20  QIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNPDTFMHNTLIRSLSL 79

Query: 239 NDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           +     ++  F +L+      PD      A+ A     +L  G +LH+ A + GF + + 
Sbjct: 80  SQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIF 139

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +G TL+ MYA+C       RVF +M+  + ++W  ++               FR   +EG
Sbjct: 140 VGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTA------------AFRCGDVEG 187

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
              DV              CM              + +L   N ++  Y K G +  +R 
Sbjct: 188 AQ-DV------------FGCMP-------------VRNLTSWNGMLAGYAKAGELGLARR 221

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  +  +D VSW++MI  + HNG  +EA   F  +    + ++ ++L   LSA +    
Sbjct: 222 VFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGA 281

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMIN 536
            + GK L+GF+ + GF   GSV ++L+D Y++CG + +A  VF N    + ++ WTS+I 
Sbjct: 282 FEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIA 341

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
              +HG G+ AI LF++ME     PD ITF++LLYACSHSGL+ EG      M+  Y ++
Sbjct: 342 GLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIE 401

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHY C+VDL GRA  L++AY+F+  M + P A +W  LLGAC +H N E+ E+V  +
Sbjct: 402 PAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKAR 461

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L E+DP N G++VL+SNV+A + KWKDV  +R  M    +KKTPG S IEI   I+ F+A
Sbjct: 462 LAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVA 521

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            +K +  ++E ++KL EI  +L  E GY  Q + VLH++EEEEK   +  HSE+LA A+G
Sbjct: 522 GEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFG 581

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + K  +G ++RI KNLRVC DCH+  KL+S+++  E++VRD +RFH F+ G CSC DYW
Sbjct: 582 IAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 204/436 (46%), Gaps = 55/436 (12%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAFTFPCVIKACA 69
           A +LF        F  N ++ +   +  PL  L  + ++R    +S D+FTF   +KA A
Sbjct: 55  ALRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVA 114

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
             + L  G ++H    + G+D+  F+  +L++MYA+C D   AR++FD M E  +VV WN
Sbjct: 115 NSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEP-NVVTWN 173

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           ++++A    G    A  +F  M                                      
Sbjct: 174 AVLTAAFRCGDVEGAQDVFGCMPV------------------------------------ 197

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
            +NL  +  N ++A YA+ G++  A  V Y++  +D VSW++M+ GF  N  + +A  FF
Sbjct: 198 -RNLTSW--NGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFF 254

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           REL     + ++V     +SA  + G    GK LH +  K GF+    + N L+D Y+KC
Sbjct: 255 RELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKC 314

Query: 310 CCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
             V     VF  M  A+  +SWT+IIAG A + C  +A++LF  ++  G+  D +   S+
Sbjct: 315 GNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISL 374

Query: 369 LMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN-VFE 420
           L ACS       G    S+ K ++G  I   +        +VD+YG+   +  +   + E
Sbjct: 375 LYACSHSGLVEEGCGLFSKMKNLYG--IEPAIEH---YGCMVDLYGRAARLQKAYEFICE 429

Query: 421 SIESKDVVSWTSMISS 436
              S + + W +++ +
Sbjct: 430 MPVSPNAIIWRTLLGA 445



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 35/264 (13%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLRVLETYSRMRV- 51
           +CG V  A+ +F  +  R + +WN ML  Y   GE           PLR   ++S M V 
Sbjct: 181 RCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVG 240

Query: 52  ---LGISVDAFTF----------------PCVIKACAMLKDLDCGAKIHGLVLKCGYDST 92
               G   +AF F                  V+ ACA     + G  +HG V K G+   
Sbjct: 241 FAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYV 300

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
             + N+L+  Y+KC +   AR +F  M     +V W SII+  +  G   EA+ LF EM+
Sbjct: 301 GSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEME 360

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN--ALIAMYARCGK 210
             G+  +  TF++ L AC  S     G  +  + +K+   ++  + +   ++ +Y R  +
Sbjct: 361 ESGVRPDGITFISLLYACSHSGLVEEGCGLF-SKMKNLYGIEPAIEHYGCMVDLYGRAAR 419

Query: 211 MTEAAGVLYQLE-NKDSVSWNSML 233
           + +A   + ++  + +++ W ++L
Sbjct: 420 LQKAYEFICEMPVSPNAIIWRTLL 443



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 43/260 (16%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVD--VYGKCGNIDYSRNVFESIE 423
           S+L  CS LK    TK+IH  I + GL +D ++   ++          + Y+  +F    
Sbjct: 7   SLLSKCSSLK---PTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFP 63

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSALSAASSLSILKKGK 482
           + D     ++I S   +     +L  F  L  +  +  DS T   AL A ++   L+ G 
Sbjct: 64  NPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGI 123

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYA-------------------------------RCG 511
           +L+    R GF+    V ++L+ MYA                               RCG
Sbjct: 124 QLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCG 183

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            ++ A  VF C+  ++L  W  M+      G   +A  +FY+M       D +++  ++ 
Sbjct: 184 DVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLR----DEVSWSTMIV 239

Query: 572 ACSHSGLINEGKKFL-EIMR 590
             +H+G  +E   F  E++R
Sbjct: 240 GFAHNGCFDEAFGFFRELLR 259


>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/694 (35%), Positives = 381/694 (54%), Gaps = 42/694 (6%)

Query: 182  IHAATVKSGQNLQV-YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN- 239
            +HA  +K  Q       A  LI+ Y   G    AA V Y    ++ + WNS +  F  + 
Sbjct: 442  MHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSA 501

Query: 240  -DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
              L+   ++ F+EL G G   D      A+    R+ ++  G E+H   IK+GF  D+ +
Sbjct: 502  GSLHI-VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYL 560

Query: 299  GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
               LM+ Y +C  +    +VF++M   + + W   I    Q+    K +ELFR +Q   L
Sbjct: 561  RCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFL 620

Query: 359  DADVMIIGSVLMAC-SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
             A+   I  VL A  S L  ++  KE HGY++R G   D+ +  +++D+Y K  ++  ++
Sbjct: 621  KAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQ 680

Query: 417  NVFESIESK-----------------------------------DVVSWTSMISSYVHNG 441
             VF++++++                                   D+V+W  MIS Y   G
Sbjct: 681  AVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 740

Query: 442  LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
               EAL  F  M +  V  +S ++   L A +SLS+L+KGKE++   IR GF  +  VA+
Sbjct: 741  CGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVAT 800

Query: 502  SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAP 561
            +L+DMY++  +L  A+KVF  +Q K L  W  MI    + G GK AI +F +M+     P
Sbjct: 801  ALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGP 860

Query: 562  DHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQF 621
            D ITF ALL AC +SGLI EG K+ + M  DY++ P  EHY C+VDLLGRA +L+EA+  
Sbjct: 861  DAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDL 920

Query: 622  VRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKW 681
            + +M ++P A +W ALLG+CR+H N +  E  AK L +L+P N  NY+L+ N+++   +W
Sbjct: 921  IHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRW 980

Query: 682  KDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLERE 741
            +D++ +R  M  +G++     SWI+I  ++H F + +K H ++ +IY +L ++  ++++ 
Sbjct: 981  EDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKL 1040

Query: 742  GGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSF 801
             GYV     V  N++E EK ++L  H+E+LAI YG++K   G  IR+ KN R+C DCHS 
Sbjct: 1041 -GYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSA 1099

Query: 802  CKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
             K +S +  REL +RD  RFHHF  G CSC D+W
Sbjct: 1100 AKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 234/497 (47%), Gaps = 41/497 (8%)

Query: 91  STDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE-ALGLFR 149
           + D    +L++ Y    DF  A  +F  +G   + + WNS +  + +S   L   L +F+
Sbjct: 454 NPDAAAKNLISSYLGFGDFWSAAMVF-YVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFK 512

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           E+   G+V ++  +  AL+ C       LGMEIH   +K G +L VY+  AL+  Y RC 
Sbjct: 513 ELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCW 572

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + +A  V +++ N +++ WN  +   +Q++   K ++ FR++Q +  K +    V  + 
Sbjct: 573 GLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQ 632

Query: 270 AS-GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ--- 325
           AS   LG L  GKE H Y ++ GF  D+ +G +L+DMY K   +     VF  M  +   
Sbjct: 633 ASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIF 692

Query: 326 --------------------------------DFISWTTIIAGYAQNNCHLKALELFRTV 353
                                           D ++W  +I+GYA   C  +AL  F  +
Sbjct: 693 AWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQM 752

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNI 412
           Q EG+  +   I  +L AC+ L  + + KEIH   IR G + D+ +  A++D+Y K  ++
Sbjct: 753 QQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSL 812

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             +  VF  I++K + SW  MI  +   GL  EA+ +F  M +  V  D+IT  + LSA 
Sbjct: 813 KNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSAC 872

Query: 473 SSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLIL 530
            +  ++ +G K  +  I              +VD+  R G LD A  + + +  K D  +
Sbjct: 873 KNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATI 932

Query: 531 WTSMINANGLHGRGKVA 547
           W +++ +  +H   K A
Sbjct: 933 WGALLGSCRIHKNLKFA 949



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 237/529 (44%), Gaps = 55/529 (10%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLR-VLETYSRMRVLGISVDAFTFPCV 64
           G    A  +F     R    WN+ +  + S+   L  VLE +  +   G+  D+  +   
Sbjct: 470 GDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVA 529

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           +K C  + D+  G +IHG ++K G+D   ++  +L+  Y +C+   KA Q+F  M   E 
Sbjct: 530 LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPE- 588

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC-EDSSFETLGMEIH 183
            +LWN  I     S +  + + LFR+MQ   L     T V  LQA   +  F  +G E H
Sbjct: 589 ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETH 648

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF------- 236
              +++G +  VYV  +LI MY +   +T A  V   ++N++  +WNS+++G+       
Sbjct: 649 GYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFE 708

Query: 237 -------------VQNDLYC---------------KAMQFFRELQGAGQKPDQVCTVNAV 268
                        ++ DL                 +A+ FF ++Q  G  P+       +
Sbjct: 709 DALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLL 768

Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
            A   L  L  GKE+H  +I+ GF+ D+ +   L+DMY+K   +    +VF ++  +   
Sbjct: 769 RACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLA 828

Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
           SW  +I G+A      +A+ +F  +Q  G+  D +   ++L AC     + +  +    +
Sbjct: 829 SWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSM 888

Query: 389 IRKGLSDLVILNAI------VDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS-YVHN 440
           I    +D  I+  +      VD+ G+ G +D + ++  ++  K D   W +++ S  +H 
Sbjct: 889 I----TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHK 944

Query: 441 GLA---NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
            L      A  LF L  E N  ++ I +++  S  +    +   +EL G
Sbjct: 945 NLKFAETAAKNLFKL--EPNNSANYILMMNLYSIFNRWEDMDHLRELMG 991



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 43/362 (11%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YG+C  +  A Q+F ++       WN  +   + + +  + +E + +M+   +  +  T 
Sbjct: 568 YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATI 627

Query: 62  PCVIKAC-AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM- 119
             V++A  + L  L+ G + HG VL+ G+D   ++  SL+ MY K +    A+ +FD M 
Sbjct: 628 VRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMK 687

Query: 120 ---------------------------------GEKEDVVLWNSIISAYSASGQCLEALG 146
                                            G K D+V WN +IS Y+  G   EAL 
Sbjct: 688 NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALA 747

Query: 147 LFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYA 206
            F +MQ+ G++ N+ +    L+AC   S    G EIH  ++++G    V+VA ALI MY+
Sbjct: 748 FFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYS 807

Query: 207 RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           +   +  A  V  +++NK   SWN M+ GF    L  +A+  F E+Q  G  PD +    
Sbjct: 808 KSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTA 867

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQD 326
            +SA    G +  G     +      ++D +I   L + Y  CC V+ +GR  Y   A D
Sbjct: 868 LLSACKNSGLIGEG-----WKYFDSMITDYRIVPRL-EHY--CCMVDLLGRAGYLDEAWD 919

Query: 327 FI 328
            I
Sbjct: 920 LI 921



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 42/272 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLET------------ 45
           MY K  S+  A+ +FD +  R +F WN+++  Y   G   + LR+L              
Sbjct: 669 MYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVT 728

Query: 46  --------------------YSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
                               +++M+  G+  ++ +  C+++ACA L  L  G +IH L +
Sbjct: 729 WNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSI 788

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
           + G+    F+  +L+ MY+K    + A ++F R+  K  +  WN +I  ++  G   EA+
Sbjct: 789 RNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNK-TLASWNCMIMGFAIFGLGKEAI 847

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ---NLQVYVANALI 202
            +F EMQ+VG+  +A TF A L AC++S     G +   + +   +    L+ Y    ++
Sbjct: 848 SVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYC--CMV 905

Query: 203 AMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
            +  R G + EA  +++ +  K D+  W ++L
Sbjct: 906 DLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 937


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/677 (33%), Positives = 386/677 (57%), Gaps = 7/677 (1%)

Query: 164 VAALQACEDSSFETLGMEIHAATVKSGQNL---QVYVANALIAMYARCGKMTEAAGVLYQ 220
           +  L+   D+     G  IHA    +  N    +V   N+LI +Y +C +++ A  +   
Sbjct: 23  IKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDS 82

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK-PDQVCTVNAVSASGRLGNLLN 279
           +  ++ VSW++++ G++QN    +  + F+++       P++     A+S+       + 
Sbjct: 83  MPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDS-QMYVE 141

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GK+ H YA+K G      + N L+ +Y+KC  V    ++ Y +   D   +  ++ G  Q
Sbjct: 142 GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQ 201

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
           +    +A+++ + +  EG++ +     ++   C+ LK ++  K++H  +++  +  D+ I
Sbjct: 202 HTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYI 261

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            ++I+D+YGKCGN+   R  F+ ++S++VVSWTS+I++Y  N    EAL LF  M    +
Sbjct: 262 GSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCI 321

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
             +  T+    ++A+ LS L  G +L+    + G      V ++L+ MY + G +  A  
Sbjct: 322 PPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQS 381

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           VF+ +   ++I W ++I  +  HG GK A+ +F  M A    P+++TF+ ++ AC+H  L
Sbjct: 382 VFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKL 441

Query: 579 INEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           ++EG  +   +   +++ P  EHY C+V LL R+  L+EA  F+RS QI      W  LL
Sbjct: 442 VDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLL 501

Query: 639 GACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKK 698
            AC VH + + G  +A+ LL+L+P + G Y+L+SN+ A  R+W  V ++R  MR   +KK
Sbjct: 502 NACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKK 561

Query: 699 TPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE 758
            PG SW+EI N  H F + D  H E++ IY+ + ++  K+ R  GYV     VLH++E+E
Sbjct: 562 EPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKI-RPLGYVPDIDNVLHDIEDE 620

Query: 759 EKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
           +KV  L  HSE+LA+AYG++K+  G+ I + KNLR+C DCH+  KL+S++  R +VVRDA
Sbjct: 621 QKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDA 680

Query: 819 NRFHHFEAGVCSCGDYW 835
           NRFHHF+ G CSCGDYW
Sbjct: 681 NRFHHFQNGCCSCGDYW 697



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 253/486 (52%), Gaps = 11/486 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN---SLVAMYAKCYDFRKARQLFDRMG 120
           ++K  A  K+L  G  IH  +    ++  D  VN   SL+ +Y KC +   AR+LFD M 
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSM- 83

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLG 179
            + +VV W+++++ Y  +G  LE   LF++M  +  +  N Y    A+ +C DS     G
Sbjct: 84  PRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSC-DSQMYVEG 142

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            + H   +KSG     YV NALI +Y++C  +  A  +LY +   D   +N ++ G +Q+
Sbjct: 143 KQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQH 202

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+   + +   G + +    V        L ++  GK++HA  +K     D+ IG
Sbjct: 203 THMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIG 262

Query: 300 NTLMDMYAKCCCVNYMGRVFY-QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           ++++DMY KC  V   GR F+ ++ +++ +SWT+IIA Y QN    +AL LF  ++++ +
Sbjct: 263 SSIIDMYGKCGNV-LSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCI 321

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             +   +  +  + +GL  +    ++H    + GL  ++++ NA++ +Y K G+I  +++
Sbjct: 322 PPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQS 381

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF ++   ++++W ++I+ + H+GL  EAL +F  M       + +T +  + A + L +
Sbjct: 382 VFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKL 441

Query: 478 LKKGKELNGFIIRKGFNLEG-SVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           + +G      ++++   + G    + +V + +R G LD A       Q   D++ W +++
Sbjct: 442 VDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLL 501

Query: 536 NANGLH 541
           NA  +H
Sbjct: 502 NACYVH 507



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 226/444 (50%), Gaps = 7/444 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           +Y KC  V  A +LFD + +R V +W+A++  Y+ NG PL V E + +M V   I  + +
Sbjct: 66  LYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEY 125

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
                I +C     ++ G + HG  LK G +   ++ N+L+ +Y+KC D   A Q+   +
Sbjct: 126 VIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTV 184

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               D+  +N +++         EA+ + + +   G+  N  T+V   + C      TLG
Sbjct: 185 -PGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLG 243

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++HA  +KS  +  VY+ +++I MY +CG +        +L++++ VSW S++  + QN
Sbjct: 244 KQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQN 303

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           + + +A+  F +++     P++       +++  L  L  G +LHA A K G   ++ +G
Sbjct: 304 EFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVG 363

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+ MY K   +     VF  MT  + I+W  II G++ +    +AL +F+ +   G  
Sbjct: 364 NALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGER 423

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYSRN 417
            + +    V++AC+ LK + +      ++++  + +  L     IV +  + G +D + N
Sbjct: 424 PNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAEN 483

Query: 418 VFESIE-SKDVVSWTSMISS-YVH 439
              S + + DVVSW +++++ YVH
Sbjct: 484 FMRSHQINWDVVSWRTLLNACYVH 507


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/501 (42%), Positives = 325/501 (64%), Gaps = 2/501 (0%)

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-S 394
           GY   N   KALELF  +   G  +D + + +   AC  L  + Q K+IH + I+ G  S
Sbjct: 4   GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS 63

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           DL + + I+D+Y KCG++  +  VF  I + D V+WTSMIS  V NG  ++AL +++ M 
Sbjct: 64  DLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMR 123

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
           ++ V  D  T  + + A+S ++ L++G++L+  +I+     +  V +SLVDMYA+CG ++
Sbjct: 124 QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIE 183

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A ++F  +  +++ LW +M+     HG  + A++LF  M++    PD ++F+ +L ACS
Sbjct: 184 DAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 243

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           H+GL +E  ++L  M  DY ++P  EHY+CLVD LGRA  ++EA + + +M  + +A + 
Sbjct: 244 HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 303

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            ALLGACR+  + E G+ VA +L  L+P +   YVL+SN++AA+ +W DV   R  M+  
Sbjct: 304 RALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRK 363

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
            +KK PG SWI++ N +H F+  D+SH ++D IY K+ E+ + + RE GYV  T+FVL +
Sbjct: 364 NVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTI-REDGYVPDTEFVLLD 422

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           VE+EEK + LY HSE+LAIAYG++ +   + IR+ KNLRVC DCH+  K +S++F RE+V
Sbjct: 423 VEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIV 482

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RDANRFHHF  GVCSCGDYW
Sbjct: 483 LRDANRFHHFRDGVCSCGDYW 503



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 157/297 (52%), Gaps = 2/297 (0%)

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           M+ G++  +   KA++ F  +  +G+K DQ+    A  A G L  L  GK++HA+AIK G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F SDL + + ++DMY KC  +   G VF  ++A D ++WT++I+G   N    +AL ++ 
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCG 410
            ++   +  D     +++ A S +  + Q +++H  +I+   +SD  +  ++VD+Y KCG
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
           NI+ +  +F+ +  +++  W +M+     +G A EA+ LF  M    +E D ++ +  LS
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240

Query: 471 AASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           A S   +  +  E L+      G   E    S LVD   R G +  A+KV   +  K
Sbjct: 241 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 297



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 146/285 (51%), Gaps = 2/285 (0%)

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           +AL LF  + + G  ++  T   A +AC        G +IHA  +K+G +  ++V + ++
Sbjct: 13  KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGIL 72

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV 262
            MY +CG M  A  V   +   D V+W SM++G V N    +A++ +  ++ +   PD+ 
Sbjct: 73  DMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEY 132

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
                + AS  +  L  G++LHA  IK   VSD  +G +L+DMYAKC  +    R+F +M
Sbjct: 133 TFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM 192

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
             ++   W  ++ G AQ+    +A+ LF++++  G++ D +    +L ACS     S+  
Sbjct: 193 NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAY 252

Query: 383 E-IHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           E +H      G+  ++   + +VD  G+ G +  +  V E++  K
Sbjct: 253 EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 297



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 141/296 (47%), Gaps = 2/296 (0%)

Query: 29  MLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
           M+  Y+   +  + LE +S +   G   D  T     KAC  L  LD G +IH   +K G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
           +DS   + + ++ MY KC D   A  +F+ +   +DV  W S+IS    +G   +AL ++
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVA-WTSMISGCVDNGNEDQALRIY 119

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
             M++  ++ + YTF   ++A    +    G ++HA  +K       +V  +L+ MYA+C
Sbjct: 120 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 179

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G + +A  +  ++  ++   WN+ML G  Q+    +A+  F+ ++  G +PD+V  +  +
Sbjct: 180 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 239

Query: 269 SASGRLGNLLNGKE-LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
           SA    G      E LH+     G   +++  + L+D   +   V    +V   M 
Sbjct: 240 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMP 295



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 2/236 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +++A  +F+ +S      W +M+   V NG   + L  Y RMR   +  D +T
Sbjct: 74  MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 133

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IKA + +  L+ G ++H  V+K    S  F+  SLV MYAKC +   A +LF +M 
Sbjct: 134 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 193

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + ++ LWN+++   +  G   EA+ LF+ M+  G+  +  +F+  L AC  +   +   
Sbjct: 194 VR-NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAY 252

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           E +H+     G   ++   + L+    R G + EA  V+  +  K S S N  L G
Sbjct: 253 EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 308



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 4/217 (1%)

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           M+  Y+      +ALELF L++++  +SD ITL +A  A   L +L +GK+++   I+ G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           F+ +  V S ++DMY +CG +  A  VFN +   D + WTSMI+    +G    A+ +++
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYACLVDLLGR 611
           +M      PD  TF  L+ A S    + +G++    +++ D   DP+      LVD+  +
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAK 178

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
             ++E+AY+  + M +   A +W A+L     H N E
Sbjct: 179 CGNIEDAYRLFKKMNVRNIA-LWNAMLVGLAQHGNAE 214


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/593 (38%), Positives = 346/593 (58%), Gaps = 43/593 (7%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV------NYMGRVFYQMTAQDFISWTTII 334
           K+ H+  I+ G  +D    N  M    K C +      NY   VF ++   D   + TI 
Sbjct: 37  KQYHSQIIRLGLSAD----NDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIF 92

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL- 393
            GY +       + ++  +  + +  +      ++ AC     + + K+IH ++++ G  
Sbjct: 93  RGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 152

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
           +D   LN ++ +Y    +++ +R VF+++  +DVVSWTS+I+ Y   G  ++A E+F LM
Sbjct: 153 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELM 212

Query: 454 NEANVES-------------------------------DSITLVSALSAASSLSILKKGK 482
            E N  S                               D     S LSA + L  L++GK
Sbjct: 213 PERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGK 272

Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
            ++G+I + G  L+  +A++++DMY +CG L+ A++VFN +  K +  W  MI    +HG
Sbjct: 273 WIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHG 332

Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
           +G+ AI+LF +ME E  APD ITF+ +L AC+HSGL+ EGK + + M     L P  EH+
Sbjct: 333 KGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHF 392

Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
            C+VDLLGRA  LEEA + +  M + P A V  AL+GACR+H N ELGE + KK++EL+P
Sbjct: 393 GCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEP 452

Query: 663 GNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHS 722
            N G YVL++N++A++ +W+DV +VR  M   G+KK PG S IE  + +  FIA  ++H 
Sbjct: 453 HNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHP 512

Query: 723 ESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE 782
           ++ EIY KL EI E + R  GYV  T  VLH+++EEEK   LY HSE+LAIA+G+LK+  
Sbjct: 513 QAKEIYAKLDEILETI-RSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKP 571

Query: 783 GSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           G  +RI+KNLR+C DCH   KL+S+++ RE+++RD NRFHHF  G CSC DYW
Sbjct: 572 GETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 161/356 (45%), Gaps = 38/356 (10%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           K G +  A ++FDK+     + +N +   Y+        +  YSRM    +S + FT+P 
Sbjct: 66  KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +I+AC +   ++ G +IH  VLK G+ +  F +N+L+ MY       +AR++FD M +++
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 185

Query: 124 DV------------------------------VLWNSIISAYSASGQCLEALGLFREMQR 153
            V                              V WN++I+AY  S +  EA  LF  M+ 
Sbjct: 186 VVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRL 245

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
             +V + +   + L AC        G  IH    KSG  L   +A  +I MY +CG + +
Sbjct: 246 ENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEK 305

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A+ V  +L  K   SWN M+ G   +     A++ F+E++     PD +  VN +SA   
Sbjct: 306 ASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAH 365

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
            G +  GK    Y  +   V  L+ G   M+ +   C V+ +GR      A+  I+
Sbjct: 366 SGLVEEGKHYFQYMTE---VLGLKPG---MEHFG--CMVDLLGRAGLLEEARKLIN 413



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/408 (22%), Positives = 174/408 (42%), Gaps = 48/408 (11%)

Query: 55  SVDAFTFPCV-IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA--KCYDFRK 111
           S  A   P   + +C+ + +L    + H  +++ G  + +  +  ++   A  K  D   
Sbjct: 16  SAKAHKLPLYGLDSCSTMAELK---QYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNY 72

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC- 170
           A ++FD++    D  ++N+I   Y         + ++  M    +  N +T+   ++AC 
Sbjct: 73  ALEVFDKI-PHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACC 131

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD----- 225
            D + E  G +IHA  +K G     +  N LI MY     + +A  V   +  +D     
Sbjct: 132 IDYAIEE-GKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWT 190

Query: 226 --------------------------SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKP 259
                                     SVSWN+M+  +VQ++   +A   F  ++      
Sbjct: 191 SLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVL 250

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D+    + +SA   LG L  GK +H Y  K G   D ++  T++DMY KC C+     VF
Sbjct: 251 DKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVF 310

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
            ++  +   SW  +I G A +     A+ELF+ ++ E +  D +   +VL AC+    + 
Sbjct: 311 NELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVE 370

Query: 380 QTKEIHGYI-----IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
           + K    Y+     ++ G+        +VD+ G+ G ++ +R +   +
Sbjct: 371 EGKHYFQYMTEVLGLKPGMEH---FGCMVDLLGRAGLLEEARKLINEM 415



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 25/238 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G V  A ++F+ + +R   +WNAM+ AYV +         + RMR+  + +D F  
Sbjct: 196 YSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVA 255

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++ AC  L  L+ G  IHG + K G +    +  +++ MY KC    KA ++F+ + +
Sbjct: 256 ASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ 315

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K  +  WN +I   +  G+   A+ LF+EM+R  +  +  TFV  L AC           
Sbjct: 316 K-GISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACA---------- 364

Query: 182 IHAATVKSGQNLQVYVANAL------------IAMYARCGKMTEAAGVLYQLE-NKDS 226
            H+  V+ G++   Y+   L            + +  R G + EA  ++ ++  N D+
Sbjct: 365 -HSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDA 421



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 110/227 (48%), Gaps = 10/227 (4%)

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVD--VYGKCGNIDYSRNVFESIESK 425
           L +CS    M++ K+ H  IIR GLS D   +  ++      K G+++Y+  VF+ I   
Sbjct: 27  LDSCS---TMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHP 83

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           D   + ++   Y+   LA   + ++  M   +V  +  T    + A      +++GK+++
Sbjct: 84  DAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIH 143

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
             +++ GF  +G   ++L+ MY    +L+ A +VF+ +  +D++ WTS+I      G   
Sbjct: 144 AHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVD 203

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
            A ++F  M       + +++ A++ A   S  ++E     + MR +
Sbjct: 204 KAREVFELMPER----NSVSWNAMIAAYVQSNRLHEAFALFDRMRLE 246



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++F+++ Q+ + +WN M+G    +G+    +E +  M    ++ D  T
Sbjct: 296 MYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGIT 355

Query: 61  FPCVIKACA 69
           F  V+ ACA
Sbjct: 356 FVNVLSACA 364


>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
 gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/624 (37%), Positives = 346/624 (55%), Gaps = 41/624 (6%)

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK-PDQVCTVNAVSASG 272
           A  +   + N D   +N+++ G   +D    A+Q F E++      PD       + A+ 
Sbjct: 58  ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
               L NG +LH  A+  G  S L +G TL+ MYA+C C+ +  +VF +M   + ++W  
Sbjct: 118 NCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNA 177

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDA-DVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
           I+A   +      A ++FR + +  L + ++M+ G                         
Sbjct: 178 IVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAG------------------------- 212

Query: 392 GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
                         Y K G +  +R VF  +  KD VSW++MI  + HNG  N+A   F 
Sbjct: 213 --------------YTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFR 258

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
            +    +  + ++L   LSA +     + G+ L+GF+ + GF    SV ++L+D Y++CG
Sbjct: 259 EVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCG 318

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            LD+A  VF+ +  +  + WT+MI    +HG G+ AI LF +ME  +  PD ITF+++LY
Sbjct: 319 NLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILY 378

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           ACSH+GL++ G  +   M   Y ++P  EHY C+VDL GRA  L++AY FV  M I P  
Sbjct: 379 ACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPND 438

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
            VW  LLGAC +H N  L   V ++L ELDP N G++VL+SN++A + KWKDV  +R  M
Sbjct: 439 IVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSM 498

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
               LKKTPG S IE+   I+SF+A +K +  + E ++KL EI  +L  EGGYV +   V
Sbjct: 499 THQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSV 558

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           LH++E EEK   +  HSE+LA+A+G+ K   G  IR+ KNLR+C DCH+  KL+S+++  
Sbjct: 559 LHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYEV 618

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E+VVRD +RFH F  G CSC DYW
Sbjct: 619 EIVVRDRSRFHSFTHGSCSCRDYW 642



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 206/440 (46%), Gaps = 51/440 (11%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFTFPCVIKACA 69
           A +LF  +    VF +N ++     +  P   L+ +  MR   +++ D+F+F  ++KA A
Sbjct: 58  ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
             + L  G ++H L +  G DS  F+  +L++MYA+C     AR++FD M E  ++V WN
Sbjct: 118 NCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEP-NIVAWN 176

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           +I++A        +A  +FR M                                      
Sbjct: 177 AIVAACFRCEGVKDAEQVFRCM-------------------------------------P 199

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
            +NL  +  N ++A Y + G++  A  V  ++  KD VSW++M+ GF  N  +  A  FF
Sbjct: 200 IRNLTSW--NIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFF 257

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           RE++  G +P++V     +SA  + G    G+ LH +  K GF+  + + N L+D Y+KC
Sbjct: 258 REVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKC 317

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             ++    VF  M  +  +SWT +IAG A +    +A+ LF  ++   +  D +   S+L
Sbjct: 318 GNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISIL 377

Query: 370 MACS-----GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF--ESI 422
            ACS      L C   ++ ++ Y I   +        +VD+YG+ G +  + +      I
Sbjct: 378 YACSHAGLVDLGCSYFSRMVNTYGIEPVIEH---YGCMVDLYGRAGKLQQAYDFVCQMPI 434

Query: 423 ESKDVVSWTSMISSYVHNGL 442
              D+V  T + +  +H  L
Sbjct: 435 SPNDIVWRTLLGACSIHGNL 454



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 40/307 (13%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLRVLETYSRMRVL 52
           +C  V DAEQ+F  +  R + +WN ML  Y   GE           PL+   ++S M ++
Sbjct: 184 RCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTM-IV 242

Query: 53  GIS-----VDAFTF----------------PCVIKACAMLKDLDCGAKIHGLVLKCGYDS 91
           G +      DAF F                  V+ ACA     + G  +HG V K G+  
Sbjct: 243 GFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQ 302

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
              + N+L+  Y+KC +   AR +FD M  +   V W ++I+  +  G   EA+ LF EM
Sbjct: 303 IISVNNALIDTYSKCGNLDMARLVFDNM-LRRSAVSWTAMIAGMAMHGYGEEAIRLFNEM 361

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS-GQNLQVYVANALIAMYARCGK 210
           +   +  ++ TF++ L AC  +    LG    +  V + G    +     ++ +Y R GK
Sbjct: 362 EESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGK 421

Query: 211 MTEAAGVLYQLE-NKDSVSWNSMLTG-FVQNDLYCKAMQFFRELQ--GAGQKPDQVCTVN 266
           + +A   + Q+  + + + W ++L    +  +LY  A Q  R+L         D V   N
Sbjct: 422 LQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYL-AGQVKRQLSELDPENSGDHVLLSN 480

Query: 267 AVSASGR 273
             + +G+
Sbjct: 481 IYAVAGK 487



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/380 (19%), Positives = 156/380 (41%), Gaps = 66/380 (17%)

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD-ADVMIIGSVLM 370
           ++Y  R+F  +   D   + T+I G + ++    AL+LF  ++ + +   D      +L 
Sbjct: 55  LHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLK 114

Query: 371 ACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           A +  + ++   ++H   +  GL S L +   ++ +Y +C  + ++R VF+ +   ++V+
Sbjct: 115 AAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVA 174

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           W +++++        +A ++F  M   N+ S +I L                        
Sbjct: 175 WNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAG---------------------- 212

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
                            Y + G L +A +VF  +  KD + W++MI     +G    A  
Sbjct: 213 -----------------YTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFA 255

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGK---------KFLEIMRCDYQLDPWPE 600
            F ++  E   P+ ++   +L AC+ +G    G+          FL+I+  +        
Sbjct: 256 FFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVN-------- 307

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
               L+D   +  +L+ A + V    +  +A  W A++    +H     GE   +   E+
Sbjct: 308 --NALIDTYSKCGNLDMA-RLVFDNMLRRSAVSWTAMIAGMAMHG---YGEEAIRLFNEM 361

Query: 661 DPGN--PGNYVLISNVFAAS 678
           +  N  P +   IS ++A S
Sbjct: 362 EESNIKPDSITFISILYACS 381



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 105/253 (41%), Gaps = 39/253 (15%)

Query: 373 SGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKC---GNIDYSRNVFESIESKDVVS 429
           S  K +   K+I   I +  L+   +++  + ++       ++ Y+R +F  I + DV  
Sbjct: 13  SKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDVFM 72

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVE-SDSITLVSALSAASSLSILKKGKELNGFI 488
           + ++I     +   + AL+LF  M   +V   DS +    L AA++   L  G +L+   
Sbjct: 73  YNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLA 132

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFN--------------------------- 521
           +  G +    V ++L+ MYA C  L  A KVF+                           
Sbjct: 133 VGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAE 192

Query: 522 ----CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
               C+  ++L  W  M+      G  ++A ++F KM  +    D +++  ++   +H+G
Sbjct: 193 QVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLK----DDVSWSTMIVGFAHNG 248

Query: 578 LINEGKKFLEIMR 590
             N+   F   +R
Sbjct: 249 NFNDAFAFFREVR 261


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 258/729 (35%), Positives = 397/729 (54%), Gaps = 63/729 (8%)

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
           +AR+ FD +  K  +  WNSI+S Y ++G   EA  LF EM    +V+            
Sbjct: 35  EARKFFDSLQFKA-IGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVS------------ 81

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
                                       N L++ Y +   + EA  V   +  ++ VSW 
Sbjct: 82  ---------------------------WNGLVSGYIKNRMIVEARNVFELMPERNVVSWT 114

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIK 289
           +M+ G++Q  +  +A   F  +      P++    N VS +   G L++ G+   A  + 
Sbjct: 115 AMVKGYMQEGMVGEAESLFWRM------PER----NEVSWTVMFGGLIDDGRIDKARKLY 164

Query: 290 QGF-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
               V D+     ++    +   V+    +F +M  ++ ++WTT+I GY QNN    A +
Sbjct: 165 DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARK 224

Query: 349 LFRTV-QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYG 407
           LF  + +   +    M++G  L   SG     + ++   +     +  ++  NA++  +G
Sbjct: 225 LFEVMPEKTEVSWTSMLLGYTL---SG-----RIEDAEEFFEVMPMKPVIACNAMIVGFG 276

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           + G I  +R VF+ +E +D  +W  MI +Y   G   EAL+LF  M +  V     +L+S
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            LS  ++L+ L+ G++++  ++R  F+ +  VAS L+ MY +CG L  A  VF+   +KD
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           +I+W S+I+    HG G+ A+ +F++M +    P+ +T +A+L ACS++G + EG +  E
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456

Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
            M   + + P  EHY+C VD+LGRA  +++A + + SM I+P A VW ALLGAC+ HS  
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRL 516

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           +L E+ AKKL E +P N G YVL+S++ A+  KW DV  VR  MR + + K PG SWIE+
Sbjct: 517 DLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEV 576

Query: 708 GNKIHSFIARD-KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
           G K+H F     K+H E   I   L E T+ L RE GY      VLH+V+EEEKV  L  
Sbjct: 577 GKKVHMFTRGGIKNHPEQAMILMML-EKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSR 635

Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
           HSERLA+AYG+LK  EG  IR+ KNLRVC DCH+  KL+S++  RE+++RDANRFHHF  
Sbjct: 636 HSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNN 695

Query: 827 GVCSCGDYW 835
           G CSC DYW
Sbjct: 696 GECSCRDYW 704



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 242/523 (46%), Gaps = 51/523 (9%)

Query: 89  YDSTDFIV----NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           +DS  F      NS+V+ Y      ++ARQLFD M E+ +VV WN ++S Y  +   +EA
Sbjct: 40  FDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER-NVVSWNGLVSGYIKNRMIVEA 98

Query: 145 LGLFREMQ---------------RVGLVTNAYTFVAALQACEDSSFETL-GMEIHAATVK 188
             +F  M                + G+V  A +    +    + S+  + G  I    + 
Sbjct: 99  RNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRID 158

Query: 189 SGQNL-------QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
             + L        V  +  +I    R G++ EA  +  ++  ++ V+W +M+TG+ QN+ 
Sbjct: 159 KARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNR 218

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG-N 300
              A + F  +      P++         S  LG  L+G+   A    +       I  N
Sbjct: 219 VDVARKLFEVM------PEK---TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN 269

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++  + +   ++   RVF  M  +D  +W  +I  Y +    L+AL+LF  +Q +G+  
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVF 419
               + S+L  C+ L  +   +++H +++R    D V + + ++ +Y KCG +  ++ VF
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVF 389

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           +   SKD++ W S+IS Y  +GL  EAL++F+ M  +    + +TL++ L+A S    L+
Sbjct: 390 DRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLE 449

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           +G E+   +  K F +  +V   S  VDM  R G +D A ++   +  K D  +W +++ 
Sbjct: 450 EGLEIFESMESK-FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
           A   H R    +VA    ++ E     PD+     LL + + S
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENE-----PDNAGTYVLLSSINAS 546



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 121/234 (51%), Gaps = 3/234 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           +G+ G +  A ++FD +  R   TW  M+ AY   G  L  L+ +++M+  G+     + 
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++  CA L  L  G ++H  +++C +D   ++ + L+ MY KC +  KA+ +FDR   
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS 394

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D+++WNSIIS Y++ G   EAL +F EM   G + N  T +A L AC  +     G+E
Sbjct: 395 K-DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLE 453

Query: 182 I-HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
           I  +   K      V   +  + M  R G++ +A  ++  +  K D+  W ++L
Sbjct: 454 IFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 37/338 (10%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G V +A  +FD++ +R V TW  M+  Y  N          +R+ V     +       +
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQN----------NRVDVARKLFEVMPEKTEV 235

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFI----------VNSLVAMYAKCYDFRKARQL 115
              +ML       +I         D+ +F            N+++  + +  +  KAR++
Sbjct: 236 SWTSMLLGYTLSGRIE--------DAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRV 287

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M E  D   W  +I AY   G  LEAL LF +MQ+ G+  +  + ++ L  C   + 
Sbjct: 288 FDLM-EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLAS 346

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G ++HA  V+   +  VYVA+ L+ MY +CG++ +A  V  +  +KD + WNS+++G
Sbjct: 347 LQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISG 406

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +  + L  +A++ F E+  +G  P++V  +  ++A    G L  G E     I +   S 
Sbjct: 407 YASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLE-----IFESMESK 461

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
             +  T+ + Y+  C V+ +GR      A + I   TI
Sbjct: 462 FCVTPTV-EHYS--CTVDMLGRAGQVDKAMELIESMTI 496



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG ++ A+ +FD+ S + +  WN+++  Y S+G     L+ +  M   G   +  T
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              ++ AC+    L+ G +I   +  K     T    +  V M  +     KA +L + M
Sbjct: 435 LIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM 494

Query: 120 GEKEDVVLWNSIISA 134
             K D  +W +++ A
Sbjct: 495 TIKPDATVWGALLGA 509


>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
 gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
 gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
          Length = 767

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/695 (35%), Positives = 393/695 (56%), Gaps = 13/695 (1%)

Query: 24  FTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGL 83
           F WN++L +     +    L  + RMR  G     FT P V  A A L  L  GA +H  
Sbjct: 73  FLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAY 132

Query: 84  VLKCGY---DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
            ++ G    D +  + +SLV MYA+C   R A +LFD M E+ DVV W ++IS    +GQ
Sbjct: 133 SVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPER-DVVAWTAVISGCVCNGQ 191

Query: 141 CLEALGLFREMQRV----GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
           C E L     M R     G   N+ T  + L+AC      ++G  +H   VK+G      
Sbjct: 192 CGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPS 251

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V ++L +MY +C    +A  +  +L  KD VSW S++  + +     KA++ F  ++ +G
Sbjct: 252 VVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESG 311

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            +PD+V     ++  G    +  GK  HA  +++ F   + IGN L+ MYAKC  V+   
Sbjct: 312 LQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAA 371

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA---DVMIIGSVLMACS 373
            VF  +  +D  SW++++  Y +    LK LEL+R +Q    D    D   + S++ +CS
Sbjct: 372 TVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCS 431

Query: 374 GLKCMSQTKEIHGYIIRK-GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L  +   +  H Y I+     +  + NA++ +YG+CGN D +R +F  +++KDVV+W++
Sbjct: 432 RLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSA 491

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           +ISSY H G + +AL L+  M    V+ +S TLVS +S+ ++L+ L+ G+ ++  +   G
Sbjct: 492 LISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVG 551

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
              + S+ ++LVDMY +CG L IA K+F+ +  +D++ W  MI+  G+HG    A+ LF 
Sbjct: 552 LECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFS 611

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
            ME  +  P+ +TFLA+L AC H+GL+++G++    M  +Y L+P  +HYAC+VDLLG++
Sbjct: 612 MMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-EYSLEPNLKHYACMVDLLGKS 670

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
            HL+EA   V +M IEP   +W  LLGAC++H N E+G  VAKK    DP N G Y+L+S
Sbjct: 671 GHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMS 730

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           N + ++ KW ++E++R  M+  G++K+ G S I+I
Sbjct: 731 NSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDI 765



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 177/573 (30%), Positives = 300/573 (52%), Gaps = 18/573 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----GISV 56
           MY +CGSV DA +LFD++ +R V  W A++   V NG+    L    RM       G   
Sbjct: 154 MYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARP 213

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           ++ T    ++AC +L +L  G  +HG  +K G      +V+SL +MY KC     AR LF
Sbjct: 214 NSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILF 273

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
             + EK D+V W S+I AY  +G   +A+ LF  M+  GL  +       L    + +  
Sbjct: 274 PELPEK-DLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G   HAA V+      V + NALI+MYA+C ++  AA V   L  +D+ SW+SM+  +
Sbjct: 333 RGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAY 392

Query: 237 VQNDLYCKAMQFFRELQGAGQKP---DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            +  L  K ++ +RE+Q   +     D    ++ +S+  RLG L  G+  H Y+IK    
Sbjct: 393 CKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAG 452

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            +  + N L+ MY +C   +   ++F  +  +D ++W+ +I+ Y+       AL L+  +
Sbjct: 453 ENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQM 512

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
             EG+  +   + SV+ +C+ L  +   + IH ++   GL  DL I  A+VD+Y KCG +
Sbjct: 513 LTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQL 572

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             +R +F+S+  +DVV+W  MIS Y  +G A +AL+LF +M   NV+ +S+T ++ LSA 
Sbjct: 573 GIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSAC 632

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLI 529
               ++ KG+EL  F   + ++LE ++   + +VD+  + G L  A  V + +  + D  
Sbjct: 633 CHAGLVDKGREL--FTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGG 690

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           +W +++ A  +H       ++  ++  ++FA D
Sbjct: 691 IWGTLLGACKMHDN----FEMGLRVAKKAFASD 719



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 241/472 (51%), Gaps = 11/472 (2%)

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D  LWNS++ +   +      L   R M+  G   + +T      A  +     +G  +
Sbjct: 70  PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129

Query: 183 HAATVKSG---QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           HA +V+ G    +  V VA++L+ MYARCG + +A  +  ++  +D V+W ++++G V N
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189

Query: 240 DLYCKAMQFF----RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
               + + +     R     G +P+     + + A G LG L  G  LH + +K G    
Sbjct: 190 GQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHC 249

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             + ++L  MY KC        +F ++  +D +SWT++I  Y +     KA+ELF  ++ 
Sbjct: 250 PSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDY 414
            GL  D ++I  +L        +   K  H  I+R+   D V++ NA++ +Y KC  +D 
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDI 369

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM---NEANVESDSITLVSALSA 471
           +  VF  +  +D  SW+SM+ +Y   GL  + LEL+  M   ++   E D+ +L+S +S+
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISS 429

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            S L  L+ G+  + + I+       SVA++L+ MY RCG  D+A K+F  V+TKD++ W
Sbjct: 430 CSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTW 489

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           +++I++    G  K A+ L+ +M  E   P+  T ++++ +C++   +  G+
Sbjct: 490 SALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE 541



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 193/382 (50%), Gaps = 8/382 (2%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  V SG + +   A  L++ Y+  G    AA         D+  WNS+L    +   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV---SDLQI 298
           +   +   R ++ +G +P +       SA+  LG L  G  +HAY+++ G +     + +
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL----ELFRTVQ 354
            ++L+ MYA+C  V    R+F +M  +D ++WT +I+G   N    + L     + R+  
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNID 413
             G   +   + S L AC  L  +S    +HG+ ++ G+     +++++  +Y KC + +
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +R +F  +  KD+VSWTS+I +Y   G A +A+ELF  M E+ ++ D + +   L+   
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           + + ++ GK  +  I+R+ F     + ++L+ MYA+C  +DIA  VF  +  +D   W+S
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387

Query: 534 MINANGLHGRGKVAIDLFYKME 555
           M+ A    G     ++L+ +M+
Sbjct: 388 MVVAYCKAGLDLKCLELYREMQ 409


>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
          Length = 897

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/695 (35%), Positives = 393/695 (56%), Gaps = 13/695 (1%)

Query: 24  FTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGL 83
           F WN++L +     +    L  + RMR  G     FT P V  A A L  L  GA +H  
Sbjct: 73  FLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAY 132

Query: 84  VLKCGY---DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
            ++ G    D +  + +SLV MYA+C   R A +LFD M E+ DVV W ++IS    +GQ
Sbjct: 133 SVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPER-DVVAWTAVISGCVCNGQ 191

Query: 141 CLEALGLFREMQRV----GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
           C E L     M R     G   N+ T  + L+AC      ++G  +H   VK+G      
Sbjct: 192 CGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPS 251

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V ++L +MY +C    +A  +  +L  KD VSW S++  + +     KA++ F  ++ +G
Sbjct: 252 VVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESG 311

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            +PD+V     ++  G    +  GK  HA  +++ F   + IGN L+ MYAKC  V+   
Sbjct: 312 LQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAA 371

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA---DVMIIGSVLMACS 373
            VF  +  +D  SW++++  Y +    LK LEL+R +Q    D    D   + S++ +CS
Sbjct: 372 TVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCS 431

Query: 374 GLKCMSQTKEIHGYIIRK-GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L  +   +  H Y I+     +  + NA++ +YG+CGN D +R +F  +++KDVV+W++
Sbjct: 432 RLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSA 491

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           +ISSY H G + +AL L+  M    V+ +S TLVS +S+ ++L+ L+ G+ ++  +   G
Sbjct: 492 LISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVG 551

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
              + S+ ++LVDMY +CG L IA K+F+ +  +D++ W  MI+  G+HG    A+ LF 
Sbjct: 552 LECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFS 611

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
            ME  +  P+ +TFLA+L AC H+GL+++G++    M  +Y L+P  +HYAC+VDLLG++
Sbjct: 612 MMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-EYSLEPNLKHYACMVDLLGKS 670

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
            HL+EA   V +M IEP   +W  LLGAC++H N E+G  VAKK    DP N G Y+L+S
Sbjct: 671 GHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMS 730

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           N + ++ KW ++E++R  M+  G++K+ G S I+I
Sbjct: 731 NSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDI 765



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 177/573 (30%), Positives = 300/573 (52%), Gaps = 18/573 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----GISV 56
           MY +CGSV DA +LFD++ +R V  W A++   V NG+    L    RM       G   
Sbjct: 154 MYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARP 213

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           ++ T    ++AC +L +L  G  +HG  +K G      +V+SL +MY KC     AR LF
Sbjct: 214 NSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILF 273

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
             + EK D+V W S+I AY  +G   +A+ LF  M+  GL  +       L    + +  
Sbjct: 274 PELPEK-DLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G   HAA V+      V + NALI+MYA+C ++  AA V   L  +D+ SW+SM+  +
Sbjct: 333 RGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAY 392

Query: 237 VQNDLYCKAMQFFRELQGAGQKP---DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            +  L  K ++ +RE+Q   +     D    ++ +S+  RLG L  G+  H Y+IK    
Sbjct: 393 CKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAG 452

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            +  + N L+ MY +C   +   ++F  +  +D ++W+ +I+ Y+       AL L+  +
Sbjct: 453 ENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQM 512

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
             EG+  +   + SV+ +C+ L  +   + IH ++   GL  DL I  A+VD+Y KCG +
Sbjct: 513 LTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQL 572

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             +R +F+S+  +DVV+W  MIS Y  +G A +AL+LF +M   NV+ +S+T ++ LSA 
Sbjct: 573 GIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSAC 632

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLI 529
               ++ KG+EL  F   + ++LE ++   + +VD+  + G L  A  V + +  + D  
Sbjct: 633 CHAGLVDKGREL--FTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGG 690

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           +W +++ A  +H       ++  ++  ++FA D
Sbjct: 691 IWGTLLGACKMHDN----FEMGLRVAKKAFASD 719



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 241/472 (51%), Gaps = 11/472 (2%)

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D  LWNS++ +   +      L   R M+  G   + +T      A  +     +G  +
Sbjct: 70  PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129

Query: 183 HAATVKSG---QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           HA +V+ G    +  V VA++L+ MYARCG + +A  +  ++  +D V+W ++++G V N
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189

Query: 240 DLYCKAMQFF----RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
               + + +     R     G +P+     + + A G LG L  G  LH + +K G    
Sbjct: 190 GQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHC 249

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             + ++L  MY KC        +F ++  +D +SWT++I  Y +     KA+ELF  ++ 
Sbjct: 250 PSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDY 414
            GL  D ++I  +L        +   K  H  I+R+   D V++ NA++ +Y KC  +D 
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDI 369

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM---NEANVESDSITLVSALSA 471
           +  VF  +  +D  SW+SM+ +Y   GL  + LEL+  M   ++   E D+ +L+S +S+
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISS 429

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            S L  L+ G+  + + I+       SVA++L+ MY RCG  D+A K+F  V+TKD++ W
Sbjct: 430 CSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTW 489

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           +++I++    G  K A+ L+ +M  E   P+  T ++++ +C++   +  G+
Sbjct: 490 SALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE 541



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 193/382 (50%), Gaps = 8/382 (2%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  V SG + +   A  L++ Y+  G    AA         D+  WNS+L    +   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV---SDLQI 298
           +   +   R ++ +G +P +       SA+  LG L  G  +HAY+++ G +     + +
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL----ELFRTVQ 354
            ++L+ MYA+C  V    R+F +M  +D ++WT +I+G   N    + L     + R+  
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNID 413
             G   +   + S L AC  L  +S    +HG+ ++ G+     +++++  +Y KC + +
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +R +F  +  KD+VSWTS+I +Y   G A +A+ELF  M E+ ++ D + +   L+   
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           + + ++ GK  +  I+R+ F     + ++L+ MYA+C  +DIA  VF  +  +D   W+S
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387

Query: 534 MINANGLHGRGKVAIDLFYKME 555
           M+ A    G     ++L+ +M+
Sbjct: 388 MVVAYCKAGLDLKCLELYREMQ 409


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/678 (34%), Positives = 387/678 (57%), Gaps = 9/678 (1%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
            ++H   LK G     F+V  L  +YA+      A +LF+    K  V LWN+++ +Y  
Sbjct: 21  TQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKT-VYLWNALLRSYFL 79

Query: 138 SGQCLEALGLFREMQRVGLV---TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
            G+ +E L LF +M    +     + YT   AL++C       LG  IH   +K   +  
Sbjct: 80  EGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHG-FLKKKIDSD 138

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           ++V +ALI +Y++CG+M +A  V  +    D V W S++TG+ QN     A+ FF  +  
Sbjct: 139 MFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVV 198

Query: 255 AGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
             Q  PD V  V+A SA  +L +   G+ +H +  ++GF + L + N+++++Y K   + 
Sbjct: 199 LEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIR 258

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
               +F +M  +D ISW++++A YA N     AL LF  +  + ++ + + + S L AC+
Sbjct: 259 IAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACA 318

Query: 374 GLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
               + + K+IH   +  G   D+ +  A++D+Y KC + + +  +F  +  KDVVSW  
Sbjct: 319 SSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAV 378

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           + S Y   G+A+++L +F  M       D+I LV  L+A+S L I+++   L+ F+ + G
Sbjct: 379 LFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSG 438

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           F+    + +SL+++YA+C ++D ANKVF  ++  D++ W+S+I A G HG+G+ A+ L +
Sbjct: 439 FDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSH 498

Query: 553 KMEAES-FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
           +M   S   P+ +TF+++L ACSH+GLI EG K   +M  +YQL P  EHY  +VDLLGR
Sbjct: 499 QMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGR 558

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
              L++A   + +M ++    VW ALLGACR+H N ++GE+ A  L  LDP + G Y L+
Sbjct: 559 MGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLL 618

Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           SN++   + W D  ++R  ++ + LKK  G S +EI N++HSFIA D+ H ESD+IY+ L
Sbjct: 619 SNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYEML 678

Query: 732 AEITEKLEREGGYVAQTQ 749
            ++  ++ RE GY    Q
Sbjct: 679 RKLDARM-REEGYDPDLQ 695



 Score =  265 bits (677), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 168/583 (28%), Positives = 303/583 (51%), Gaps = 22/583 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS---VD 57
           +Y +  S+  A +LF++   +TV+ WNA+L +Y   G+ +  L  + +M    ++    D
Sbjct: 45  LYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPD 104

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            +T    +K+C+ L+ L+ G  IHG  LK   DS  F+ ++L+ +Y+KC     A ++F 
Sbjct: 105 NYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFT 163

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFE 176
               K DVVLW SII+ Y  +G    AL  F  M  +  V+ +  T V+A  AC   S  
Sbjct: 164 EY-PKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDF 222

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            LG  +H    + G + ++ +AN+++ +Y + G +  AA +  ++  KD +SW+SM+  +
Sbjct: 223 NLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACY 282

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             N     A+  F E+     + ++V  ++A+ A     NL  GK++H  A+  GF  D+
Sbjct: 283 ADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDI 342

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +   LMDMY KC        +F +M  +D +SW  + +GYA+     K+L +F  +   
Sbjct: 343 TVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSN 402

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYS 415
           G   D + +  +L A S L  + Q   +H ++ + G  +   + A ++++Y KC +ID +
Sbjct: 403 GTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNA 462

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM-NEANVESDSITLVSALSAASS 474
             VF+ +   DVV+W+S+I++Y  +G   EAL+L + M N ++V+ + +T VS LSA S 
Sbjct: 463 NKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSH 522

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASS--LVDMYARCGALDIA-NKVFNCVQTKDLILW 531
             ++++G ++   ++ + + L  ++     +VD+  R G LD A + + N        +W
Sbjct: 523 AGLIEEGIKMFHVMVNE-YQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVW 581

Query: 532 TSMINANGLHGRGKV----AIDLFYKMEAESFAPDHITFLALL 570
            +++ A  +H   K+    A++LF         P+H  +  LL
Sbjct: 582 GALLGACRIHQNIKIGELAALNLFL------LDPNHAGYYTLL 618


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/686 (36%), Positives = 380/686 (55%), Gaps = 58/686 (8%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQV-YVANALIAMYARCGKMTEAAGVL------- 218
           LQ C  +S  TL + IH++    G  L   +    LI +Y++ G +  A  +        
Sbjct: 32  LQCC--TSLTTLKL-IHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHH 88

Query: 219 -YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ--GAGQKPDQVCTVNAVSASGRLG 275
               +  +S   N+ML  +       +A+  +  +Q  G G        V  V AS  LG
Sbjct: 89  HGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS-ELG 147

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            +  G+ +H   ++ GF SDL +   L+DMYAKC  +     VF +M  +D + WT +I 
Sbjct: 148 AVF-GEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
            Y Q    LKAL LFR +Q EG                                   L D
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGF----------------------------------LGD 232

Query: 396 LVILNAIVDVYGKCGN----IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
            +   ++    G+ G+    I  +R VF+ +E ++ +SW SM+S Y  NG   +AL LF 
Sbjct: 233 EITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFN 292

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
            M  +  + + +T +  +SA S L     G++L+ F+I    +++ ++ ++++DMY +CG
Sbjct: 293 QMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCG 352

Query: 512 ALDIANKVFNCVQ--TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
            LD A ++FN  +   +D+  W  +I+  G+HG GK A++LF +M+ E   P+ ITF ++
Sbjct: 353 DLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSI 412

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           L ACSH+GLI+EG+K    M     + P  +HYAC+VD+LGRA  L EA++ ++ +   P
Sbjct: 413 LSACSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRP 471

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
           + EVW ALL ACR+H N ELGEI A  L +L+P + G YVL+SN++AAS KWK+VE VR 
Sbjct: 472 SDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQ 531

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
            M+  GLKK    S IE G ++H F   D+S     E+Y+K+  +  ++ +  GYV    
Sbjct: 532 NMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEM-KMVGYVPDLS 590

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
            VLH+VE E+K  +L  HSE+LA+A+G++K  +G  I++TKNLRVC DCH   K +S ++
Sbjct: 591 CVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIY 650

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
           GR+++VRD NRFHHF+ G CSCGDYW
Sbjct: 651 GRKIIVRDGNRFHHFQGGRCSCGDYW 676



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 248/500 (49%), Gaps = 53/500 (10%)

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRM-------GEKEDVVLWNSIISAYSASGQCLEA 144
           T   +  L+ +Y+K  D   AR LFD          +  +  L N+++ AY+ +G+  EA
Sbjct: 57  TPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEA 116

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
           + L+  MQR+G+  N +T+   L+ C        G  +H   V++G    ++V  AL+ M
Sbjct: 117 IDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDM 176

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           YA+CG++ +A  V  ++  +D V W +M+T + Q +   KA+  FR++Q  G   D++  
Sbjct: 177 YAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITA 236

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
           ++  SA G+LG   +G+     AI +  +                        VF +M  
Sbjct: 237 ISVASAVGQLG---DGR----MAISRARL------------------------VFDRMEE 265

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           ++ ISW ++++GY QN     AL LF  +Q    D + +    ++ ACS L      +++
Sbjct: 266 RNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKL 325

Query: 385 HGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE--SKDVVSWTSMISSYVHNG 441
           H ++I   +  D  + NAI+D+Y KCG++D +  +F + E   +DV SW  +IS Y  +G
Sbjct: 326 HNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHG 385

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
              EALELF  M    VE + IT  S LSA S   ++ +G++    + +     E    +
Sbjct: 386 HGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYA 445

Query: 502 SLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---GKVAIDLFYKMEAE 557
            +VDM  R G L+ A ++   + ++    +W +++ A  +HG    G++A +  +++E  
Sbjct: 446 CMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLE-- 503

Query: 558 SFAPDHITFLALL---YACS 574
              P+H  +  L+   YA S
Sbjct: 504 ---PEHTGYYVLMSNIYAAS 520



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 248/530 (46%), Gaps = 83/530 (15%)

Query: 1   MYGKCGSVLDAEQLFDK--------VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL 52
           +Y K G +  A  LFD               F  N ML AY + G     ++ Y  M+ +
Sbjct: 67  LYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRM 126

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G+ V+ FT+P V+K CA       G  +HG V++ G+ S  F+  +LV MYAKC +   A
Sbjct: 127 GVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDA 186

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
            ++FDRM  + DVV W ++I+ Y  + + L+AL LFR+MQ  G                 
Sbjct: 187 HEVFDRMLIR-DVVCWTAMITLYEQAERPLKALMLFRKMQEEGF---------------- 229

Query: 173 SSFETLGMEIHAATVKS--GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
                LG EI A +V S  GQ     + +  +A+       + A  V  ++E ++ +SWN
Sbjct: 230 -----LGDEITAISVASAVGQ-----LGDGRMAI-------SRARLVFDRMEERNGISWN 272

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           SML+G+ QN     A+  F ++Q +   P+ V  +  VSA   LG+   G++LH + I  
Sbjct: 273 SMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISS 332

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFY--QMTAQDFISWTTIIAGYAQNNCHLKALE 348
               D  + N +MDMY KC  ++    +F   ++  +D  SW  +I+GY  +    +ALE
Sbjct: 333 KMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALE 392

Query: 349 LFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNA 401
           LF  +Q+EG++ + +   S+L ACS       G KC +   ++    +R  +        
Sbjct: 393 LFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLS---VRPEMKHYA---C 446

Query: 402 IVDVYGKCGNIDYSRNVFESIESK--DVVSWTSMISSYVHNGL------ANEALEL---- 449
           +VD+ G+ G ++ +  + + I S+  D V    +++  +H         AN   +L    
Sbjct: 447 MVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEH 506

Query: 450 ---FYLMNEANVESDSITLVS---------ALSAASSLSILKKGKELNGF 487
              + LM+     S+    V           L   ++ S+++ G E++GF
Sbjct: 507 TGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGF 556



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 138/300 (46%), Gaps = 25/300 (8%)

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFES---- 421
           +L  C+ L  +   K IH  +  +G  L     L  ++ +Y K G++  +R +F+     
Sbjct: 31  LLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87

Query: 422 ----IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
                ++ +     +M+ +Y + G + EA++L+  M    V  ++ T    L   +S   
Sbjct: 88  HHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELG 147

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
              G+ ++G ++R GF  +  V ++LVDMYA+CG +  A++VF+ +  +D++ WT+MI  
Sbjct: 148 AVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITL 207

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
                R   A+ LF KM+ E F  D IT +++  A    G + +G+  + I R     D 
Sbjct: 208 YEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV---GQLGDGR--MAISRARLVFDR 262

Query: 598 WPEHYACLVDLL-------GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
             E      + +       GR       +  +++ + +P       ++ AC    +K LG
Sbjct: 263 MEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLG 322


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/591 (37%), Positives = 360/591 (60%), Gaps = 5/591 (0%)

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           F  NDL  +      +L+G+    D+      +        L+ G+ +HA+ ++  F  D
Sbjct: 37  FPSNDLLLRTSS--NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHD 94

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + +GNTL++MYAKC  +    +VF +M  +DF++WTT+I+GY+Q++    AL  F  +  
Sbjct: 95  IVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
            G   +   + SV+ A +  +      ++HG+ ++ G  S++ + +A++D+Y + G +D 
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           ++ VF+++ES++ VSW ++I+ +       +ALELF  M          +  S   A SS
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
              L++GK ++ ++I+ G  L     ++L+DMYA+ G++  A K+F+ +  +D++ W S+
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           + A   HG GK A+  F +M      P+ I+FL++L ACSHSGL++EG  + E+M+ D  
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-G 393

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P   HY  +VDLLGRA  L  A +F+  M IEPTA +W ALL ACR+H N ELG   A
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           + + ELDP +PG +V++ N++A+  +W D  +VR +M+ SG+KK P  SW+EI N IH F
Sbjct: 454 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 513

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
           +A D+ H + +EI +K  E+  K+ +E GYV  T  V+ +V+++E+   L  HSE++A+A
Sbjct: 514 VANDERHPQREEIARKWEEVLAKI-KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 572

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
           + +L +  GS I I KN+RVC DCH+  KL S++ GRE++VRD NRFHHF+
Sbjct: 573 FALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFK 623



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 190/376 (50%), Gaps = 3/376 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A ++F+K+ QR   TW  ++  Y  +  P   L  +++M   G S + FT
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VIKA A  +   CG ++HG  +KCG+DS   + ++L+ +Y +      A+ +FD + 
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DV  WN++I+ ++      +AL LF+ M R G   + +++ +   AC  + F   G 
Sbjct: 224 SRNDVS-WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK 282

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KSG+ L  +  N L+ MYA+ G + +A  +  +L  +D VSWNS+LT + Q+ 
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 342

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+ +F E++  G +P+++  ++ ++A    G L  G   +    K G V +     
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV 402

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTII-AGYAQNNCHLKALELFRTVQLEGL 358
           T++D+  +   +N   R   +M  +   + W  ++ A     N  L A       +L+  
Sbjct: 403 TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPD 462

Query: 359 DADVMIIGSVLMACSG 374
           D    +I   + A  G
Sbjct: 463 DPGPHVILYNIYASGG 478



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 197/385 (51%), Gaps = 3/385 (0%)

Query: 54  ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           I  D   +  ++K C + K L  G  +H  +L+  +     + N+L+ MYAKC    +AR
Sbjct: 56  IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           ++F++M ++ D V W ++IS YS   +  +AL  F +M R G   N +T  + ++A    
Sbjct: 116 KVFEKMPQR-DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                G ++H   VK G +  V+V +AL+ +Y R G M +A  V   LE+++ VSWN+++
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            G  +     KA++ F+ +   G +P      +   A    G L  GK +HAY IK G  
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
                GNTL+DMYAK   ++   ++F ++  +D +SW +++  YAQ+    +A+  F  +
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
           +  G+  + +   SVL ACS    + +    +  + + G+  +      +VD+ G+ G++
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414

Query: 413 DYSRNVFESIESKDVVS-WTSMISS 436
           + +    E +  +   + W +++++
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNA 439


>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
          Length = 648

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/648 (35%), Positives = 367/648 (56%), Gaps = 16/648 (2%)

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK-PDQV 262
           MY +CG++  A  V   + +++ VSW +++ GF+++      ++   E++ A +  P++ 
Sbjct: 1   MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
               ++ A   +G+   G  +H   ++ G+     + ++L+ +Y+K   +    RVF   
Sbjct: 61  TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120

Query: 323 T-AQDFISWTTIIAGYAQNNCHLKALELFRTVQL-EGL-DADVMIIGSVLMACSGLKCMS 379
                  +W  +++GYA       AL +FR ++  EG    D     S+L ACSGL    
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180

Query: 380 QTKEIHGYIIRKGLS---DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           +  ++H  +   G S   + ++  A+VD+Y KC  +  +  VFE +E K+V+ WT+++  
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           +   G   EALELF     +    DS  L S +   +  +++++G++++ + I+     +
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
            S  +S+VDMY +CG  D A ++F  ++  +++ WT+M+N  G HG G+ A+ LF +M A
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 360

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
               PD +T+LALL ACSH+GL++E +++   +R D  + P  EHYAC+VDLLGRA  L 
Sbjct: 361 GGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELR 420

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EA   +R+M +EPT  VW  LL ACRVH +  +G      LL +D  NP NYV +SNV A
Sbjct: 421 EARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLA 480

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI---ARDKSHSESDEIYKKLAE 733
            + +W++  +VR  MR  GLKK  G SW+E+G ++H F      +++H ++ +I + L +
Sbjct: 481 EAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRD 540

Query: 734 ITEKLEREGGYVA-QTQFVLHNVEEEEKVQMLYGHSERLAIAY-----GVLKSTEGSLIR 787
           +  ++  + GY A   +F LH+V+EE + + L  HSERLA+       GV     G  IR
Sbjct: 541 METRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIR 600

Query: 788 ITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + KNLRVC DCH F K +S +  R LVVRDANRFH FE G CSC DYW
Sbjct: 601 VYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 255/513 (49%), Gaps = 23/513 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           MY KCG +  A ++F  +  R V +W A++  ++ +G+    L     MR     + + +
Sbjct: 1   MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T    +KAC ++ D   G  IHGL ++ GY   D + +SLV +Y+K      AR++FD  
Sbjct: 61  TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQR--VGLVTNAYTFVAALQACEDSSFET 177
           G    +  WN+++S Y+ +G   +AL +FREM+R       + +TF + L+AC       
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180

Query: 178 LGMEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
            G ++HAA   SG +      +A AL+ MY +C ++  A  V  +LE K+ + W +++ G
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
             Q     +A++ FR    +G +PD     + V        +  G+++H Y IK    +D
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           +  GN+++DMY KC   +   R+F +M A + +SWTT++ G  ++    +A+ LF  ++ 
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 360

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA------IVDVYGKC 409
            G++ D +   ++L ACS    + + +     I R    D  +         +VD+ G+ 
Sbjct: 361 GGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRR----DRTVRPKAEHYACMVDLLGRA 416

Query: 410 GNIDYSRNVFESIESKDVVS-WTSMISS-YVHNGLA--NEALELFYLMNEANVESDSITL 465
           G +  +R++  ++  +  V  W +++S+  VH  +A   EA ++   M+  N   + +TL
Sbjct: 417 GELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDN-PVNYVTL 475

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            + L+ A       K ++    + R+G   +G 
Sbjct: 476 SNVLAEAGEWRECHKVRDA---MRRRGLKKQGG 505


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/720 (32%), Positives = 390/720 (54%), Gaps = 5/720 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG ++DA ++FD +  R +  W AM+ A+ + G+  + L+ ++RM   GI+ + FT
Sbjct: 94  MYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFT 153

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+KAC+         ++HG V+K       ++ +SLV  Y  C +   A  +   + 
Sbjct: 154 LASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLP 213

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DV  WN++++ Y+  G     + +  ++   G   + YT    L+ C +      G 
Sbjct: 214 ERSDVS-WNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQ 272

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA+ +K G      + + L+ MY+RC    EA  V  +++  D V  ++M++ F ++D
Sbjct: 273 SVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHD 332

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           +  +A+  F ++ G G KP+    V     + R G+    + +HAY +K GF     +G+
Sbjct: 333 MAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGD 392

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG-YAQNNCHLKALELFRTVQLEGLD 359
            +++MY K   V      F  +   D  SW TI++  Y+ +NC  + L +F+ +  EG  
Sbjct: 393 AILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCE-QGLRIFKQMACEGFS 451

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
           A+     SVL  C+ L  +    ++H  I++ GL +D  +   +VD+Y + G    +  V
Sbjct: 452 ANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLV 511

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           FE ++ +D  SWT ++S Y     A + +E F  M   N+     TL  +LS  S ++ L
Sbjct: 512 FEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASL 571

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             G +L+ + I+ G+N    V+ +LVDMY +CG +  A  +F+  +T+D + W ++I   
Sbjct: 572 GSGLQLHSWAIKSGWN-SSVVSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGY 630

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             HG G  A+D F +M  E   PD ITF+ +L ACSH+GL+NEG+K+ + +   Y + P 
Sbjct: 631 SQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPT 690

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHYAC+VD+L +A  L EA   +  M + P + +W  +LGACR+H N E+ E  A++L 
Sbjct: 691 MEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLF 750

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           EL+P +  + +L+SN++A   +W DV +VR  +   G+KK PG SWIEI  +IH F+++D
Sbjct: 751 ELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 253/519 (48%), Gaps = 2/519 (0%)

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           ++ CA+ + L  G ++H  +L+       F+++SL+ MY KC     AR++FD M  + D
Sbjct: 57  LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHR-D 115

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           +V W ++ISA++A+G   +AL +F  M + G+  N +T  + L+AC   S      ++H 
Sbjct: 116 IVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHG 175

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             VK       YV ++L+  Y  CG++  A  VL  L  +  VSWN++L G+ ++  Y +
Sbjct: 176 QVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRR 235

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
            M    +L  +G +  +      +     LG    G+ +HA  IK+G  +D  + + L++
Sbjct: 236 VMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVE 295

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           MY++C        VF ++   D +  + +I+ + +++   +AL+LF  +   G+  +  I
Sbjct: 296 MYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYI 355

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIE 423
              +    S     +  + +H YI++ G + L  + +AI+++Y K G +  +   F+ I 
Sbjct: 356 FVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIH 415

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
             D  SW +++S++       + L +F  M      ++  T VS L   +SL  L+ G +
Sbjct: 416 EPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQ 475

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++  I++ G   +  V+  LVDMYA+ G    A  VF  ++ +D   WT +++       
Sbjct: 476 VHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEE 535

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
            +  ++ F  M  E+  P   T    L  CS    +  G
Sbjct: 536 AEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSG 574



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 201/411 (48%), Gaps = 1/411 (0%)

Query: 165 AALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
           AALQ C        G E+HA  ++S  +   ++ ++L+ MY +CG++ +A  V   + ++
Sbjct: 55  AALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHR 114

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
           D V+W +M++         +A+  F  +   G  P+     + + A     +     ++H
Sbjct: 115 DIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVH 174

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
              +K   + D  +G++L++ Y  C  ++    V   +  +  +SW  ++ GYA++  + 
Sbjct: 175 GQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYR 234

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIV 403
           + + +   +   G +     + +VL  C  L      + +H  +I++GL +D V+ + +V
Sbjct: 235 RVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLV 294

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           ++Y +C + + +  VF  I+  DVV  ++MIS +  + +A EAL+LF  M+   V+ +  
Sbjct: 295 EMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHY 354

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
             V     AS        + ++ +I++ GF +   V  ++++MY + GA+  A   F+ +
Sbjct: 355 IFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLI 414

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
              D   W ++++A       +  + +F +M  E F+ +  T++++L  C+
Sbjct: 415 HEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCT 465



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 143/279 (51%), Gaps = 8/279 (2%)

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIES 424
            + L  C+  + + + +E+H  ++R  L  D  +L++++++Y KCG +  +R VF+ +  
Sbjct: 54  AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPH 113

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           +D+V+WT+MIS++   G +++AL++F  MN+  +  +  TL S L A S  S  K   ++
Sbjct: 114 RDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQV 173

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +G +++     +  V SSLV+ Y  CG LD A  V   +  +  + W +++N    HG  
Sbjct: 174 HGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDY 233

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYA 603
           +  + +  K+ A        T   +L  C   GL   G+     +++   + D      +
Sbjct: 234 RRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLN--S 291

Query: 604 CLVDLLGRANHLEEAYQ-FVRSMQIEPTAEVWCALLGAC 641
           CLV++  R    EEAY+ F+R   I+    V C+ + +C
Sbjct: 292 CLVEMYSRCLSAEEAYEVFIR---IDEPDVVHCSAMISC 327


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 349/592 (58%), Gaps = 35/592 (5%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC------------------CCVNYM--- 315
           L  GK++HA+    G +  L I N L+DMYAKC                  C  N M   
Sbjct: 135 LKEGKQVHAHIKTSGSIG-LYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISG 193

Query: 316 ----------GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD-ADVMI 364
                       +F +M  +D  SWT II+G  Q+N   +ALEL+R +Q      ++   
Sbjct: 194 YVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCT 253

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           I S L A + +  +   K+IHG+I+R GL SD V+  +++D+YGKCG+I+ +R +F+ +E
Sbjct: 254 ISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKME 313

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            +DVVSWT+MI +Y+ NG   E   LF  +  +N+  +  T    L+A + L+    GK+
Sbjct: 314 ERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQ 373

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           ++ +++R GF+   S AS+LV MY++CG ++ A  VF  +   DL  WTS++     HG+
Sbjct: 374 IHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQ 433

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
              A+  F  +      PD I F+ +L AC+H+GL+++G ++   ++  + L    +HYA
Sbjct: 434 HDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYA 493

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C++DLL RA    EA   +  M I+P   +W ALLG CR+H N EL +  AK L E++P 
Sbjct: 494 CIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPE 553

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           NP  YV ++N++A++    +   +R  M   G+ K PG SWIEI  ++H F   D SH +
Sbjct: 554 NPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPK 613

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
           S EI + L+E+++++ +E GYV  T FVLH+VE E+K + L  HSE+LA+A+G++ +  G
Sbjct: 614 SKEILEYLSELSKRM-KEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSG 672

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + I++ KNLR CVDCH+  K +S + GR+++VRD+NRFH FE G CSC DYW
Sbjct: 673 TPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 199/437 (45%), Gaps = 48/437 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS++DAE++FD++  R + +WN M+  YV  G   +    + +M     + D F+
Sbjct: 162 MYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMP----NRDNFS 217

Query: 61  FPCVIKACAM------------------------------------LKDLDCGAKIHGLV 84
           +  +I  C                                      +  L  G KIHG +
Sbjct: 218 WTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHI 277

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           ++ G DS + +  SL+ MY KC    +AR +FD+M E+ DVV W ++I  Y  +G+  E 
Sbjct: 278 MRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKM-EERDVVSWTTMIHTYLKNGRREEG 336

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
             LFR +    ++ N +TF   L AC D + E LG +IHA  V+ G +     A+AL+ M
Sbjct: 337 FALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHM 396

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           Y++CG +  A  V   L   D  SW S+L G+ Q+  + KA+ FF  L  +G KPD +  
Sbjct: 397 YSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAF 456

Query: 265 VNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
           +  +SA    G +  G E  H+   K G    +     ++D+ A+         +  +M 
Sbjct: 457 IGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMP 516

Query: 324 AQ-DFISWTTIIAG-YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC---- 377
            + D   W  ++ G     N  L         ++E  +    +  + + A +G++     
Sbjct: 517 IKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEAN 576

Query: 378 MSQTKEIHGYIIRKGLS 394
           + +T +  G + + G+S
Sbjct: 577 IRETMDSRGIVKKPGMS 593



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 233/489 (47%), Gaps = 45/489 (9%)

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           D  L+   I       +  EA+ L   +++      A  ++  L+ C        G ++H
Sbjct: 87  DSKLFKEAIDILCGQSRLREAVQLLYRIEK----PYASIYLTLLKFCLKQRALKEGKQVH 142

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF------- 236
           A  +K+  ++ +Y++N L+ MYA+CG + +A  V  ++ ++D  SWN M++G+       
Sbjct: 143 AH-IKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFE 201

Query: 237 ------------------------VQNDLYCKAMQFFRELQGAGQKPDQVCTV-NAVSAS 271
                                   VQ++   +A++ +R +Q         CT+ +A++AS
Sbjct: 202 KARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAAS 261

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             + +L  GK++H + ++ G  SD  +  +L+DMY KC  +     +F +M  +D +SWT
Sbjct: 262 AAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWT 321

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
           T+I  Y +N    +   LFR +    +  +      VL AC+ L      K+IH Y++R 
Sbjct: 322 TMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRV 381

Query: 392 GLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           G        +A+V +Y KCG+I+ +++VFE +   D+ SWTS++  Y  +G  ++AL  F
Sbjct: 382 GFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFF 441

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYAR 509
            L+ ++  + D I  +  LSA +   ++ KG E    I  K G        + ++D+ AR
Sbjct: 442 ELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLAR 501

Query: 510 CGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHIT 565
            G    A  + N +  K D  +W +++    +HG     K A    +++E E+  P    
Sbjct: 502 AGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPEN--PATYV 559

Query: 566 FLALLYACS 574
            LA +YA +
Sbjct: 560 TLANIYASA 568



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 166/348 (47%), Gaps = 17/348 (4%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N +++ Y K  +F KAR LFD+M  +++   W +IIS      +  EAL L+R MQ+   
Sbjct: 188 NIMISGYVKGGNFEKARNLFDKMPNRDNFS-WTAIISGCVQHNRPEEALELYRLMQKHDY 246

Query: 157 V-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
             +N  T  +AL A        +G +IH   ++ G +    V  +L+ MY +CG + EA 
Sbjct: 247 SKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEAR 306

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            +  ++E +D VSW +M+  +++N    +    FR L  +   P+       ++A   L 
Sbjct: 307 YIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLA 366

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
               GK++HAY ++ GF S     + L+ MY+KC  +     VF  +   D  SWT+++ 
Sbjct: 367 AEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLV 426

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYI 388
           GYAQ+  H KAL  F  +   G   D +    VL AC+       GL+     KE H   
Sbjct: 427 GYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKH--- 483

Query: 389 IRKGLSDLVILNA-IVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMI 434
              GL+  +   A I+D+  + G    + ++   +  K D   W +++
Sbjct: 484 ---GLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALL 528


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/569 (37%), Positives = 342/569 (60%), Gaps = 3/569 (0%)

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           ++A  +  NL + +++HA+     F  D  + N+L+ +Y KC  V    +VF +M  +D 
Sbjct: 58  ITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDM 117

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SWT++IAGYAQN+   +A+ L   +       +     S+L A          ++IH  
Sbjct: 118 VSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHAL 177

Query: 388 IIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            ++     D+ + +A++D+Y +CG +D +  VF+ ++SK+ VSW ++IS +   G    A
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L  F  M     E+   T  S  S+ + L  L++GK ++  +I+    +     ++L+DM
Sbjct: 238 LMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDM 297

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           YA+ G++  A KVF+ V  KDL+ W +M+ A   +G GK A+  F +M       + +TF
Sbjct: 298 YAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTF 357

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           L +L ACSH GL+ EGK++ E+M+ +Y L+P  +H+  +V LLGRA  L  A  F+  M 
Sbjct: 358 LCILTACSHGGLVKEGKRYFEMMK-EYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMP 416

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           IEPTA VW ALL ACR+H N ++G+  A  + ELDP + G  VL+ N++A++ +W    +
Sbjct: 417 IEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAAR 476

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR  M+ +G+KK P  SW+E+ N +H F+A D +H  ++EIYK   +I++K+ +E GYV 
Sbjct: 477 VRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKE-GYVP 535

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
              +VL  V+++E+   L  HSE+LA+A+ +++   G+ IRI KN+R+C DCHS  K +S
Sbjct: 536 DMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYIS 595

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++FGRE+VVRD NRFHHF  G CSC DYW
Sbjct: 596 KVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 173/328 (52%), Gaps = 12/328 (3%)

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           I ACA  K+L+   K+H  +    +    F+ NSL+ +Y KC    +AR++FD M  ++D
Sbjct: 58  ITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEM-RRKD 116

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           +V W S+I+ Y+ +    EA+GL   M +     N +TF + L+A    +   +G +IHA
Sbjct: 117 MVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHA 176

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             VK   +  VYV +AL+ MYARCG M  A  V  +L++K+ VSWN++++GF +      
Sbjct: 177 LAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGET 236

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  F E+   G +       +  S+  RLG L  GK +HA+ IK         GNTL+D
Sbjct: 237 ALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLD 296

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           MYAK   +    +VF ++  +D ++W T++  +AQ     +A+  F  ++  G+  + + 
Sbjct: 297 MYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVT 356

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKG 392
              +L ACS           HG ++++G
Sbjct: 357 FLCILTACS-----------HGGLVKEG 373



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 143/275 (52%), Gaps = 4/275 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCGSVL+A ++FD++ ++ + +W +++  Y  N  P   +     M       + FT
Sbjct: 95  LYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFT 154

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++KA     D   G +IH L +KC +    ++ ++L+ MYA+C     A  +FD++ 
Sbjct: 155 FASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLD 214

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  V  WN++IS ++  G    AL  F EM R G     +T+ +   +         G 
Sbjct: 215 SKNGVS-WNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGK 273

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KS Q +  +  N L+ MYA+ G M +A  V  ++++KD V+WN+MLT F Q  
Sbjct: 274 WVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYG 333

Query: 241 LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASG 272
           L  +A+  F E++ +G   +QV   C + A S  G
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGG 368


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/577 (38%), Positives = 344/577 (59%), Gaps = 6/577 (1%)

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD---MYAKCCCVNYMGRVFY 320
           T + +S   +  +L   K+L A+AIK    SDL +    ++   +      + +   +F 
Sbjct: 20  TTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFD 79

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
           Q+   D + + T+  GYA+ +  L+A  LF  +   GL  D     S+L AC+  K + +
Sbjct: 80  QIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEE 139

Query: 381 TKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
            +++H   I+ GLS+ V +   ++++Y  C  +D +R VF+ I    VV++ +MI+ Y  
Sbjct: 140 GRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYAR 199

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
               NEAL LF  +   N++   +T++S LS+ + L  L  GK ++ ++ + GFN    V
Sbjct: 200 GSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKV 259

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            ++L+DMYA+CG+LD A  VF  +  +D   W++MI A  +HG G  A+ LF +M     
Sbjct: 260 DTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGT 319

Query: 560 APDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAY 619
            PD ITFL LLYACSH+GL+ EG ++   MR  Y + P  +HY C+VDLLGRA  LEEAY
Sbjct: 320 EPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAY 379

Query: 620 QFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASR 679
           +F+  + I PT  +W  LL AC  H N ELG+ V +++ ELD  + G+Y+++SN+ A + 
Sbjct: 380 EFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAG 439

Query: 680 KWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLE 739
           +W+DV  VR  M   G+ K PG S +E+ N +H F + D  HS S ++++ L E+ ++L 
Sbjct: 440 RWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKEL- 498

Query: 740 REGGYVAQTQFVLH-NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDC 798
           +  GYV  T  V H ++E+EEK   L  HSE+LAI +G+L +  G+ IR+ KNLRVC DC
Sbjct: 499 KLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDC 558

Query: 799 HSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           HS  KL+S +F R++++RD  RFHHF+ G CSC DYW
Sbjct: 559 HSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 158/303 (52%), Gaps = 2/303 (0%)

Query: 7   SVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIK 66
           S+  A  LFD++ Q  +  +N M   Y     PLR    ++++   G+  D +TFP ++K
Sbjct: 70  SMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLK 129

Query: 67  ACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVV 126
           ACA  K L+ G ++H L +K G     ++  +L+ MY  C +   AR++FD++ E   VV
Sbjct: 130 ACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEP-CVV 188

Query: 127 LWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
            +N++I+ Y+   +  EAL LFRE+Q   L     T ++ L +C       LG  +H   
Sbjct: 189 TYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYV 248

Query: 187 VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAM 246
            K+G N  V V  ALI MYA+CG + +A  V   +  +D+ +W++M+  +  +    KA+
Sbjct: 249 KKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAV 308

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIGNTLMDM 305
             F+E++ AG +PD++  +  + A    G +  G E  +    K G +  ++    ++D+
Sbjct: 309 SLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDL 368

Query: 306 YAK 308
             +
Sbjct: 369 LGR 371



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 193/374 (51%), Gaps = 12/374 (3%)

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           M  A  +  Q+   D V +N+M  G+ + D   +A   F ++  +G  PD     + + A
Sbjct: 71  MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
                 L  G++LH  AIK G   ++ +  TL++MY  C  ++   RVF ++     +++
Sbjct: 131 CASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTY 190

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR 390
             +I GYA+ +   +AL LFR +Q   L    + + SVL +C+ L  +   K +H Y+ +
Sbjct: 191 NAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKK 250

Query: 391 KGLSDLVILN-AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
            G +  V ++ A++D+Y KCG++D +  VFE++  +D  +W++MI +Y  +G   +A+ L
Sbjct: 251 NGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSL 310

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMY 507
           F  M +A  E D IT +  L A S   ++++G E   + +R  + +   +     +VD+ 
Sbjct: 311 FKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEY-FYGMRDKYGVIPGIKHYGCMVDLL 369

Query: 508 ARCGALDIANKVFNCVQTKDL-ILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDH 563
            R G L+ A +    +  +   ILW ++++A G HG    GK  I+  ++++ +S   D+
Sbjct: 370 GRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELD-DSHGGDY 428

Query: 564 ITFLALLYACSHSG 577
           I    L   C+ +G
Sbjct: 429 IILSNL---CARAG 439



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 179/354 (50%), Gaps = 7/354 (1%)

Query: 110 RKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQA 169
           + A  LFD++  + D+VL+N++   Y+ +   L A  LF ++   GL  + YTF + L+A
Sbjct: 72  QHAHHLFDQI-PQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130

Query: 170 CEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
           C        G ++H   +K G +  VYV   LI MY  C +M  A  V  ++     V++
Sbjct: 131 CASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTY 190

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
           N+M+TG+ +     +A+  FRELQ    KP  V  ++ +S+   LG L  GK +H Y  K
Sbjct: 191 NAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKK 250

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
            GF   +++   L+DMYAKC  ++    VF  M  +D  +W+ +I  YA +   LKA+ L
Sbjct: 251 NGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSL 310

Query: 350 FRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE-IHGYIIRKG-LSDLVILNAIVDVYG 407
           F+ ++  G + D +    +L ACS    + +  E  +G   + G +  +     +VD+ G
Sbjct: 311 FKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLG 370

Query: 408 KCGNIDYSRNVFESIESKDV-VSWTSMISSYVHNG---LANEALELFYLMNEAN 457
           + G ++ +      +  +   + W +++S+   +G   L    +E  + +++++
Sbjct: 371 RAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSH 424



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  C  +  A ++FDK+ +  V T+NAM+  Y     P   L  +  ++   +     T
Sbjct: 165 MYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVT 224

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ +CA+L  LD G  +H  V K G++    +  +L+ MYAKC     A  +F+ M 
Sbjct: 225 MLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMA 284

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D   W+++I AY+  G  L+A+ LF+EM++ G   +  TF+  L AC  +     G 
Sbjct: 285 VR-DTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGF 343

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS-VSWNSMLTG 235
           E  +    K G    +     ++ +  R G++ EA   +  L  + + + W ++L+ 
Sbjct: 344 EYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSA 400


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/606 (36%), Positives = 356/606 (58%), Gaps = 8/606 (1%)

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           S+L    + DL   AM     ++  G   D +     +      G +  GK +H +    
Sbjct: 256 SLLNHCYRRDL-PSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSN 314

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G+     + N L++MY K   +     +F +M  ++ +SWTT+I+ Y+    + +A+ L 
Sbjct: 315 GYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLL 374

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKC 409
             +  +G+  ++    SVL AC  L  +   K++H +I++ GL SD+ + +A++DVY K 
Sbjct: 375 AFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKM 431

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
           G +  +  VF  + + D V W S+I+++  +   +EAL L+  M      +D  TL S L
Sbjct: 432 GELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVL 491

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
            A +SLS+L+ G++ +  +++  F+ +  + ++L+DMY +CG+L+ A  +FN +  KD+I
Sbjct: 492 RACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVI 549

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            W++MI     +G    A++LF  M+ +   P+HIT L +L+ACSH+GL+NEG  +   M
Sbjct: 550 SWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSM 609

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
              Y +DP  EHY C++DLLGRA  L++  + +  M  EP    W  LL ACR   N +L
Sbjct: 610 NNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDL 669

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
               AK++L+LDP + G YVL+SN++A S++W DV +VR  M+  G++K PG SWIE+  
Sbjct: 670 ATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNK 729

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
           +IH+FI  DKSH + DEI ++L +   +L    GYV  T FVL ++E E++   L  HSE
Sbjct: 730 QIHAFILGDKSHPQIDEINRQLNQFICRLA-GAGYVPDTNFVLQDLEGEQREDSLRYHSE 788

Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
           +LAI +G++   +   IRI KNL++C DCH F KL++ L  R +V+RD  R+HHF+ GVC
Sbjct: 789 KLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVC 848

Query: 830 SCGDYW 835
           SCGDYW
Sbjct: 849 SCGDYW 854



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 214/405 (52%), Gaps = 22/405 (5%)

Query: 40  LRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSL 99
           + VL++  R    G+  D+ T+  +IK C     +  G ++H  +   GY    F+ N L
Sbjct: 270 MHVLDSMERR---GVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNIL 326

Query: 100 VAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN 159
           + MY K     +A+ LFD+M E+ +VV W ++ISAYS +     A+ L   M R G++ N
Sbjct: 327 INMYVKFNLLEEAQVLFDKMPER-NVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPN 385

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
            +TF + L+ACE      L  ++H+  +K G    V+V +ALI +Y++ G++ EA  V  
Sbjct: 386 MFTFSSVLRACE--RLYDLK-QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFR 442

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
           ++   DSV WNS++  F Q+    +A+  ++ ++  G   DQ    + + A   L  L  
Sbjct: 443 EMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLEL 502

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G++ H + +K  F  DL + N L+DMY KC  +     +F +M  +D ISW+T+IAG AQ
Sbjct: 503 GRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQ 560

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL 399
           N   ++AL LF +++++G   + + I  VL ACS    +++     G+   + +++L  +
Sbjct: 561 NGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNE-----GWYYFRSMNNLYGI 615

Query: 400 NA-------IVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
           +        ++D+ G+   +D    +   +    DVV+W +++ +
Sbjct: 616 DPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDA 660



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 209/402 (51%), Gaps = 18/402 (4%)

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
           A+ +   M+R G+  ++ T+   ++ C        G  +H     +G + + ++ N LI 
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           MY +   + EA  +  ++  ++ VSW +M++ +    L  +AM+    +   G  P+   
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
             + + A  RL +L   K+LH++ +K G  SD+ + + L+D+Y+K   +    +VF +M 
Sbjct: 389 FSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
             D + W +IIA +AQ++   +AL L+++++  G  AD   + SVL AC+ L  +   ++
Sbjct: 446 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQ 505

Query: 384 IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
            H +++ K   DL++ NA++D+Y KCG+++ ++ +F  +  KDV+SW++MI+    NG +
Sbjct: 506 AHVHVL-KFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFS 564

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS- 502
            EAL LF  M     + + IT++  L A S   ++ +G     +  R   NL G      
Sbjct: 565 MEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEG----WYYFRSMNNLYGIDPGRE 620

Query: 503 ----LVDMYARCGALDIANKV---FNCVQTKDLILWTSMINA 537
               ++D+  R   LD   K+    NC    D++ W ++++A
Sbjct: 621 HYGCMLDLLGRAEKLDDMVKLIHEMNC--EPDVVTWRTLLDA 660



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 203/397 (51%), Gaps = 13/397 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   + +A+ LFDK+ +R V +W  M+ AY +     R +   + M   G+  + FT
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V++AC  L DL    ++H  ++K G +S  F+ ++L+ +Y+K  +  +A ++F  M 
Sbjct: 389 FSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             + VV WNSII+A++      EAL L++ M+RVG   +  T  + L+AC   S   LG 
Sbjct: 446 TGDSVV-WNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGR 504

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   +K  Q+L   + NAL+ MY +CG + +A  +  ++  KD +SW++M+ G  QN 
Sbjct: 505 QAHVHVLKFDQDL--ILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNG 562

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GFVSDLQI 298
              +A+  F  ++  G KP+ +  +  + A    G L+N    +  ++    G     + 
Sbjct: 563 FSMEALNLFESMKVQGPKPNHITILGVLFACSHAG-LVNEGWYYFRSMNNLYGIDPGREH 621

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQLE 356
              ++D+  +   ++ M ++ ++M  + D ++W T++ A  A+ N  L        ++L+
Sbjct: 622 YGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLD 681

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
             D    ++ S + A S  K  +   E+   + ++G+
Sbjct: 682 PQDTGAYVLLSNIYAIS--KRWNDVAEVRRTMKKRGI 716


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/744 (31%), Positives = 415/744 (55%), Gaps = 15/744 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGISVD 57
           +Y + G ++ A ++F+K+ +R + +W+ M+ A   +G   E L V   + R R    S +
Sbjct: 88  LYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTR--KDSPN 145

Query: 58  AFTFPCVIKACAML--KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            +     I+AC+ L  +      ++   ++K G+D   ++   L+  Y K  +   AR +
Sbjct: 146 EYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLV 205

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD + EK  V  W ++IS     G+   +L LF ++    +V + Y     L AC    F
Sbjct: 206 FDALPEKSTVT-WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPF 264

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G +IHA  ++ G  +   + N LI  Y +CG++  A  +   + NK+ +SW ++L+G
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           + QN L+ +AM+ F  +   G KPD     + +++   L  L  G ++HAY IK    +D
Sbjct: 325 YKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA----QNNCHLKALELFR 351
             + N+L+DMYAKC C+    +VF    A D + +  +I GY+    Q   H +AL +FR
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH-EALNIFR 443

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCG 410
            ++   +   ++   S+L A + L  +  +K+IHG + + GL+ D+   +A++DVY  C 
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            +  SR VF+ ++ KD+V W SM + YV      EAL LF  +  +    D  T  + ++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           AA +L+ ++ G+E +  ++++G      + ++L+DMYA+CG+ + A+K F+   ++D++ 
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W S+I++   HG GK A+ +  KM +E   P++ITF+ +L ACSH+GL+ +G K  E+M 
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM- 682

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
             + ++P  EHY C+V LLGRA  L +A + +  M  +P A VW +LL  C    N EL 
Sbjct: 683 LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
           E  A+  +  DP + G++ ++SN++A+   W + ++VR RM+  G+ K PG SWI I  +
Sbjct: 743 EHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKE 802

Query: 711 IHSFIARDKSHSESDEIYKKLAEI 734
           +H F+++DKSH ++++IY+ L ++
Sbjct: 803 VHIFLSKDKSHCKANQIYEVLDDL 826



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 216/405 (53%), Gaps = 17/405 (4%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +  G  L  Y++N LI +Y+R G M  A  V  ++  ++ VSW++M++    + +
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125

Query: 242 YCKAMQFFREL-QGAGQKPDQVCTVNAVSA-SGRLGNLLNGK------ELHAYAIKQGFV 293
           Y +++  F E  +     P++    + + A SG     L+G+      +L ++ +K GF 
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSG-----LDGRGRWMVFQLQSFLVKSGFD 180

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            D+ +G  L+D Y K   ++Y   VF  +  +  ++WTT+I+G  +      +L+LF  +
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
             + +  D  I+ +VL ACS L  +   K+IH +I+R GL  D  ++N ++D Y KCG +
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             +  +F  + +K+++SWT+++S Y  N L  EA+ELF  M++  ++ D     S L++ 
Sbjct: 301 IAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           +SL  L  G +++ + I+     +  V +SL+DMYA+C  L  A KVF+     D++L+ 
Sbjct: 361 ASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFN 420

Query: 533 SMINAN---GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +MI      G       A+++F  M      P  +TF++LL A +
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA 465



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 121/219 (55%), Gaps = 7/219 (3%)

Query: 384 IHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           +HG II  GL  D  + N ++++Y + G + Y+R VFE +  +++VSW++M+S+  H+G+
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK----ELNGFIIRKGFNLEGS 498
             E+L +F        +S +  ++S+   A S  +  +G+    +L  F+++ GF+ +  
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS-GLDGRGRWMVFQLQSFLVKSGFDRDVY 184

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           V + L+D Y + G +D A  VF+ +  K  + WT+MI+     GR  V++ LFY++  ++
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244

Query: 559 FAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLD 596
             PD      +L ACS    +  GK+    I+R   ++D
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD 283


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/656 (34%), Positives = 363/656 (55%), Gaps = 35/656 (5%)

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V   ++  + + WN+M  G   +     A++ +  +   G  P+       + +  +
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK-----------------------CC 310
           L     G ++H + +K G+  DL +  +L+ MY +                         
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 311 CVNYMGR--------VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
              Y  R        +F ++  +D +SW  +I+GY +   + +ALELF+ +    +  D 
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFES 421
             + +V+ A +    +   +++H +I   G  S+L I+NA++D Y KCG ++ +  +F  
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           +  KDV+SW  +I  Y H  L  EAL LF  M  +    + +T++S L A + L  +  G
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG 315

Query: 482 KELNGFIIR--KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           + ++ +I +  KG     S+ +SL+DMY++CG ++ A++VFN +  K L  W +MI    
Sbjct: 316 RWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFA 375

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
           +HGR   A D+F +M      PD ITF+ LL ACSH+G+++ G+     M  +Y++ P  
Sbjct: 376 MHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKL 435

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
           EHY C++DLLG +   +EA + + +M +EP   +WC+LL AC++H N ELGE  A+ L +
Sbjct: 436 EHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFK 495

Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
           ++P NPG+YVL+SN++A + +W +V ++R  +   G+KK PG S IEI + +H FI  DK
Sbjct: 496 IEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 555

Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
            H  + EIY  L E+ E L +E G+V  T  VL  +EEE K   L  HSE+LAIA+G++ 
Sbjct: 556 FHPRNREIYGMLEEM-EVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLIS 614

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +   + + I KNLRVC +CH   KL+S+++ RE++ RD  RFHHF  GVCSC DYW
Sbjct: 615 TKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 254/498 (51%), Gaps = 51/498 (10%)

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ ++++WN++   ++ S   + AL L+  M  +GL+ N+YTF   L++C        G+
Sbjct: 24  QEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGL 83

Query: 181 EIHAATVKSGQNLQVYVANALIAMY-------------------------------ARCG 209
           +IH   +K G  L +YV  +LI+MY                               A  G
Sbjct: 84  QIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRG 143

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            +  A  +  ++  KD VSWN+M++G+V+   Y +A++ F+E+     +PD+   V  +S
Sbjct: 144 YIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVIS 203

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           AS R G++  G+++H++    GF S+L+I N L+D Y+KC  +     +F  ++ +D IS
Sbjct: 204 ASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVIS 263

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W  +I GY   N + +AL LF+ +   G   + + + S+L AC+ L  +   + IH YI 
Sbjct: 264 WNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYID 323

Query: 390 R--KGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           +  KG+++   L  +++D+Y KCG+I+ +  VF S+  K + +W +MI  +  +G AN A
Sbjct: 324 KRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAA 383

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL-----NGFIIRKGFNLEGSVAS 501
            ++F  M +  ++ D IT V  LSA S   +L  G+ +     + + I       G    
Sbjct: 384 FDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYG---- 439

Query: 502 SLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR----GKVAIDLFYKMEA 556
            ++D+    G    A ++ + +  + D ++W S++ A  +HG      K A +LF K+E 
Sbjct: 440 CMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLF-KIEP 498

Query: 557 ESFAPDHITFLALLYACS 574
            +  P     L+ +YA +
Sbjct: 499 NN--PGSYVLLSNIYATA 514



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 242/538 (44%), Gaps = 75/538 (13%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F+ + +  +  WN M   +  + +P+  L+ Y  M  LG+  +++TFP ++K+CA 
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------- 123
           LK    G +IHG VLK GY+   ++  SL++MY +      A ++FDR   ++       
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 124 -----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
                                  DVV WN++IS Y  +G   EAL LF+EM +  +  + 
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            T V  + A   S    LG ++H+     G    + + NALI  Y++CG+M  A G+   
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           L  KD +SWN ++ G+   +LY +A+  F+E+  +G+ P+ V  ++ + A   LG +  G
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG 315

Query: 281 KELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           + +H Y  K  +G  +   +  +L+DMY+KC  +    +VF  M  +   +W  +I G+A
Sbjct: 316 RWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFA 375

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
            +     A ++F  ++   +  D +    +L ACS                         
Sbjct: 376 MHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACS------------------------- 410

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIE-----SKDVVSWTSMISSYVHNGLANEALELFYLM 453
                      G +D  R++F S+      +  +  +  MI    H+GL  EA E+   M
Sbjct: 411 ---------HAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTM 461

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
               +E D +   S L A      ++ G++    + +   N  GS    L ++YA  G
Sbjct: 462 ---TMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYV-LLSNIYATAG 515



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 179/368 (48%), Gaps = 38/368 (10%)

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           + Y   VF  +   + + W T+  G+A +   + AL+L+  +   GL  +      +L +
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72

Query: 372 CSGLKCMSQTKEIHGYIIRKGLS--------------------------------DLVIL 399
           C+ LK   +  +IHG++++ G                                  D+V  
Sbjct: 73  CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
            A+V  Y   G I+ +RN+F+ I  KDVVSW +MIS YV  G   EALELF  M + NV 
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
            D  T+V+ +SA++    ++ G++++ +I   GF     + ++L+D Y++CG ++ A  +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  +  KD+I W  +I         K A+ LF +M     +P+ +T L++L+AC+H G I
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYA---CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           + G +++ +   D +L       +    L+D+  +   +E A+Q   SM +  +   W A
Sbjct: 313 DIG-RWIHVY-IDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAWNA 369

Query: 637 LLGACRVH 644
           ++    +H
Sbjct: 370 MIFGFAMH 377



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 134/294 (45%), Gaps = 8/294 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A  +FD++  + V +WNAM+  YV  G     LE +  M    +  D  T 
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             VI A A    ++ G ++H  +   G+ S   IVN+L+  Y+KC +   A  LF  +  
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY 258

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN +I  Y+      EAL LF+EM R G   N  T ++ L AC       +G  
Sbjct: 259 K-DVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRW 317

Query: 182 IHAATVK--SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           IH    K   G      +  +LI MY++CG +  A  V   + +K   +WN+M+ GF  +
Sbjct: 318 IHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMH 377

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-----HAYAI 288
                A   F  ++    KPD +  V  +SA    G L  G+ +     H Y I
Sbjct: 378 GRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKI 431



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 3/142 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A Q+F+ +  +++  WNAM+  +  +G      + +SRMR   I  D  T
Sbjct: 342 MYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDIT 401

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN--SLVAMYAKCYDFRKARQLFDR 118
           F  ++ AC+    LD G  I    +   Y  T  + +   ++ +      F++A ++   
Sbjct: 402 FVGLLSACSHAGMLDLGRHIFR-SMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMIST 460

Query: 119 MGEKEDVVLWNSIISAYSASGQ 140
           M  + D V+W S++ A    G 
Sbjct: 461 MTMEPDGVIWCSLLKACKMHGN 482


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/598 (37%), Positives = 350/598 (58%), Gaps = 10/598 (1%)

Query: 243 CKAMQFFRELQGAGQKP----DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           C+A+   R+L           D+    + + A   LG+    + L     K+  +S    
Sbjct: 55  CQALPLLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMS---- 110

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+  Y K   +    ++F +M A++  +W  ++AG   +  + ++L  F  ++ EG+
Sbjct: 111 WNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGM 170

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D   +GS+   C+GL+ +   +++H Y++R GL  D+ + +++  +Y +CG +     
Sbjct: 171 QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEA 230

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
              ++ S ++VS  + IS    NG A  ALE F LM  A VE++++T VSA+++ S L+ 
Sbjct: 231 ALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 290

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L +G++++   I+ G +    V +SLV MY+RCG L  + +V       DL+L ++MI+A
Sbjct: 291 LAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA 350

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G HG G+ A+ LF +M A    P+ +TFL LLYACSHSGL +EG    E+M   Y L P
Sbjct: 351 YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQP 410

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             +HY C+VDLLGR+  L EA   + SM ++P   +W  LL AC+     ++ E +A+++
Sbjct: 411 SVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERV 470

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           +ELDP +  +YVL+SN+ A S +W+DV +VR  MR   ++K PG SW+E+  +IH F   
Sbjct: 471 IELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTG 530

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           D+SHS   EI + L E+  ++ R+ GY      V H++E+EEK   L  HSE+LAIA+  
Sbjct: 531 DESHSRQREIVECLEEMMTRI-RQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAF 589

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L   EG  IR+ KNLRVC DCH   KL+S++ GRE+VVRD +RFHHF+ G CSCGDYW
Sbjct: 590 LSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 176/348 (50%), Gaps = 14/348 (4%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N L+  Y K  D   AR+LFD M  + +V  WN++++  + SG   E+LG F  M+R G+
Sbjct: 112 NILIGGYVKNGDLETARKLFDEMPAR-NVATWNAMVAGLTNSGLNEESLGFFFAMRREGM 170

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + Y   +  + C        G ++HA  V+SG +  + V ++L  MY RCG + +   
Sbjct: 171 QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEA 230

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
            L  L + + VS N+ ++G  QN     A++FF  ++GAG + + V  V+AV++   L  
Sbjct: 231 ALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 290

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G+++HA AIK G    + +  +L+ MY++C C+    RV  + +  D +  + +I+ 
Sbjct: 291 LAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA 350

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYII 389
           Y  +    KA+ LF+ +   G + + +   ++L ACS       G+ C     + +G   
Sbjct: 351 YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGL-- 408

Query: 390 RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
                 +     IVD+ G+ G ++ + ++  S+    D V W +++S+
Sbjct: 409 ---QPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 453



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 210/438 (47%), Gaps = 46/438 (10%)

Query: 137 ASGQCLEALGL-FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
           ++G+  EAL   FRE    GL +    F    +AC+      L  ++HA    SG     
Sbjct: 25  STGRVKEALHRRFRE----GLWSEPGLFSHIFRACQALP---LLRQLHAFAATSGAAADR 77

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN---------------- 239
           + AN L+  YA  G    A G+  ++  ++ +SWN ++ G+V+N                
Sbjct: 78  FTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPAR 137

Query: 240 ---------------DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
                           L  +++ FF  ++  G +PD+    +       L ++++G+++H
Sbjct: 138 NVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVH 197

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
           AY ++ G   D+ +G++L  MY +C  +         + + + +S  T I+G  QN    
Sbjct: 198 AYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAE 257

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIV 403
            ALE F  ++  G++A+ +   S + +CS L  ++Q ++IH   I+ G+  +V ++ ++V
Sbjct: 258 GALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLV 317

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
            +Y +CG +  S  V       D+V  ++MIS+Y  +G   +A+ LF  M  A  E + +
Sbjct: 318 HMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEV 377

Query: 464 TLVSALSAASSLSILKKGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANK-V 519
           T ++ L A S   +  +G  +N F ++ K + L+ SV   + +VD+  R G L+ A   +
Sbjct: 378 TFLTLLYACSHSGLKDEG--MNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLI 435

Query: 520 FNCVQTKDLILWTSMINA 537
            +     D ++W ++++A
Sbjct: 436 LSMPVQPDGVIWKTLLSA 453



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 180/377 (47%), Gaps = 8/377 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +  A +LFD++  R V TWNAM+    ++G     L  +  MR  G+  D +  
Sbjct: 118 YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGL 177

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             + + CA L+D+  G ++H  V++ G D    + +SL  MY +C   R       R   
Sbjct: 178 GSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAAL-RALP 236

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             ++V  N+ IS  + +G    AL  F  M+  G+  NA TFV+A+ +C D +    G +
Sbjct: 237 SLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQ 296

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IHA  +K+G +  V V  +L+ MY+RCG + ++  V  +    D V  ++M++ +  +  
Sbjct: 297 IHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGH 356

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVN---AVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
             KA+  F+++  AG +P++V  +    A S SG     +N  EL       G    ++ 
Sbjct: 357 GQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTY--GLQPSVKH 414

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALELFRTVQLE 356
              ++D+  +  C+N    +   M  Q D + W T+++    Q    +      R ++L+
Sbjct: 415 YTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELD 474

Query: 357 GLDADVMIIGSVLMACS 373
             D+   ++ S + A S
Sbjct: 475 PHDSASYVLLSNIRATS 491



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 111/237 (46%), Gaps = 5/237 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG + D E     +    + + N  +     NG+    LE +  MR  G+  +A T
Sbjct: 218 MYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVT 277

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA-RQLFDRM 119
           F   + +C+ L  L  G +IH L +K G D    ++ SLV MY++C     + R   +  
Sbjct: 278 FVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYS 337

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           G   D+VL +++ISAY   G   +A+GLF++M   G   N  TF+  L AC  S  +  G
Sbjct: 338 G--TDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEG 395

Query: 180 MEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
           M       K+ G    V     ++ +  R G + EA  ++  +    D V W ++L+
Sbjct: 396 MNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS 452


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/534 (40%), Positives = 342/534 (64%), Gaps = 7/534 (1%)

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L++MY K   +N   ++F QM  ++ ISWTT+I+ Y++   H KALEL   +  +G+ 
Sbjct: 52  NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVR 111

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            +V    SVL AC+G   MS  + +H  II++GL SD+ + +A++DV+ K G  + + +V
Sbjct: 112 PNVYTYSSVLRACNG---MSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSV 168

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ + + D + W S+I  +  N  ++ ALELF  M  A   ++  TL S L A + L++L
Sbjct: 169 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 228

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + G + +  I++  ++ +  + ++LVDMY +CG+L+ A +VFN ++ +D+I W++MI+  
Sbjct: 229 ELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGL 286

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             +G  + A+ LF  M++    P++IT + +L+ACSH+GL+ +G  +   M+  Y ++P 
Sbjct: 287 AQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPG 346

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY C++DLLG+A  L++A + +  M+ EP A  W  LLGACRV  N  L E  AKK++
Sbjct: 347 REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVI 406

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
            LDP + G Y ++SN++A S+KW  VE++R RMR  G+KK PG SWIE+  +IH+FI  D
Sbjct: 407 ALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGD 466

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           +SH +  E+ KKL ++  +L    GYV +T FVL ++E E+    L  HSE+LA+A+G++
Sbjct: 467 ESHPQIVEVNKKLNQLIHRL-IGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 525

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
                 +IRI KNLR+C DCH FCKL S+L  R +V+RD  R+HHF+ G CSCG
Sbjct: 526 TLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 200/392 (51%), Gaps = 19/392 (4%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G+  D+ T+  +IK C   + +  G  I   +   G+    F+VN L+ MY K      A
Sbjct: 8   GLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDA 67

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
            QLFD+M ++ +V+ W ++ISAYS      +AL L   M R G+  N YT+ + L+AC  
Sbjct: 68  HQLFDQMPQR-NVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNG 126

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
            S   +   +H   +K G    VYV +ALI ++A+ G+  +A  V  ++   D++ WNS+
Sbjct: 127 MSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 183

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           + GF QN     A++ F+ ++ AG   +Q    + + A   L  L  G + H + +K  +
Sbjct: 184 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--Y 241

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
             DL + N L+DMY KC  +    RVF QM  +D I+W+T+I+G AQN    +AL+LF  
Sbjct: 242 DQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFEL 301

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-------IVDV 405
           ++  G   + + I  VL ACS    +       G+   + +  L  +N        ++D+
Sbjct: 302 MKSSGTKPNYITIVGVLFACSHAGLLED-----GWYYFRSMKKLYGINPGREHYGCMIDL 356

Query: 406 YGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
            GK G +D +  +   +E   D V+W +++ +
Sbjct: 357 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 388



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 193/385 (50%), Gaps = 27/385 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   + DA QLFD++ QR V +W  M+ AY       + LE    M   G+  + +T
Sbjct: 57  MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYT 116

Query: 61  FPCVIKACAMLKD---LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           +  V++AC  + D   L CG      ++K G +S  ++ ++L+ ++AK  +   A  +FD
Sbjct: 117 YSSVLRACNGMSDVRMLHCG------IIKEGLESDVYVRSALIDVFAKLGEPEDALSVFD 170

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            M    D ++WNSII  ++ + +   AL LF+ M+R G +    T  + L+AC   +   
Sbjct: 171 EMVTG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 229

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LGM+ H   VK  Q+L   + NAL+ MY +CG + +A  V  Q++ +D ++W++M++G  
Sbjct: 230 LGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLA 287

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-------KELHAYAIKQ 290
           QN    +A++ F  ++ +G KP+ +  V  + A    G L +G       K+L  Y I  
Sbjct: 288 QNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL--YGINP 345

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALE 348
           G     +    ++D+  K   ++   ++  +M  + D ++W T++ A   Q N  L    
Sbjct: 346 G----REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA 401

Query: 349 LFRTVQLEGLDADVMIIGSVLMACS 373
             + + L+  DA    + S + A S
Sbjct: 402 AKKVIALDPEDAGTYTVLSNIYANS 426



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 162/331 (48%), Gaps = 18/331 (5%)

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCG 410
           ++Q  GL AD      ++  C   + + +   I  ++   G   ++ L N ++++Y K  
Sbjct: 3   SLQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFN 62

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            ++ +  +F+ +  ++V+SWT+MIS+Y    +  +ALEL  LM    V  +  T  S L 
Sbjct: 63  LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLR 122

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           A + +S ++    L+  II++G   +  V S+L+D++A+ G  + A  VF+ + T D I+
Sbjct: 123 ACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 179

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG-KKFLEIM 589
           W S+I     + R  VA++LF +M+   F  +  T  ++L AC+   L+  G +  + I+
Sbjct: 180 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 239

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL-GACRVHSNKE 648
           + D  L         LVD+  +   LE+A +    M+ E     W  ++ G  +   ++E
Sbjct: 240 KYDQDLIL----NNALVDMYCKCGSLEDARRVFNQMK-ERDVITWSTMISGLAQNGYSQE 294

Query: 649 LGEIVAKKLLEL--DPGNPGNYVLISNVFAA 677
                A KL EL    G   NY+ I  V  A
Sbjct: 295 -----ALKLFELMKSSGTKPNYITIVGVLFA 320


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/679 (33%), Positives = 384/679 (56%), Gaps = 4/679 (0%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G  +   T+  +I AC+ L+ L+ G KIH  +LK        + N ++ MY KC   + A
Sbjct: 58  GFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDA 117

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
           +++FD M E+ +VV W S+I+ YS +GQ   AL  + +M + G++ + +TF + ++AC  
Sbjct: 118 QKVFDAMPER-NVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSS 176

Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
                LG ++HA  +KS     +   NALI+MY +   + +A  V  ++  +D +SW SM
Sbjct: 177 LGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSM 236

Query: 233 LTGFVQNDLYCKAMQFFRELQGAG-QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           + GF Q     +A+ +F+E+   G   P++    +  SA   L     G++LH  +IK G
Sbjct: 237 IAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFG 296

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
              D+  G +L DMYAKC  ++    VFYQ+   D ++W  IIAG+A      +A+  F 
Sbjct: 297 LGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFS 356

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCG 410
            ++ +GL  D + + S+L AC+    + Q  ++HGYI + GL  D+ + N ++ +Y KC 
Sbjct: 357 QMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCS 416

Query: 411 NIDYSRNVFESIE-SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
            +  +   FE +  + D+VSW +++++ + +  A E   L  LM  +    D ITL + L
Sbjct: 417 ELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVL 476

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
            A++    ++ G +++ + ++ G N + SV + L+D+YA+CG+L  A+K+F+ +   D++
Sbjct: 477 GASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVV 536

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
            W+S+I      G G+ A+ LF  M      P+H+TF+ +L ACSH GL+ EG K    M
Sbjct: 537 SWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTM 596

Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
             ++ + P  EH +C+VDLL RA  L EA  F+  M  +P   VW  LL AC+ H N ++
Sbjct: 597 EKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDV 656

Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
           G+  A+ +L++DP N   +VL+ N++A+   W+DV ++R  M+  G++K PG SWIE+ +
Sbjct: 657 GKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKD 716

Query: 710 KIHSFIARDKSHSESDEIY 728
           +IH F   D  H E ++IY
Sbjct: 717 RIHVFFVEDSLHPERNKIY 735



 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 179/572 (31%), Positives = 305/572 (53%), Gaps = 17/572 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKC S+ DA+++FD + +R V +W +++  Y  NG+    LE Y +M   G+  D FT
Sbjct: 107 MYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFT 166

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IKAC+ L D+  G ++H  VLK  + +     N+L++MY K      A  +F RM 
Sbjct: 167 FGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMA 226

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL-VTNAYTFVAALQACEDSSFETLG 179
            + D++ W S+I+ +S  G  LEAL  F+EM   G+ + N + F +   AC        G
Sbjct: 227 TR-DLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYG 285

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H  ++K G    V+   +L  MYA+CG ++ A  V YQ+   D V+WN+++ GF   
Sbjct: 286 RQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYG 345

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+ FF +++  G  PD++   + + A      L  G ++H Y  K G   D+ + 
Sbjct: 346 GDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVC 405

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           NTL+ MYAKC  +      F +M    D +SW  I+    +   H +A E+FR ++L  +
Sbjct: 406 NTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMR---HDQAEEVFRLLKLMCI 462

Query: 359 D---ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
                D + + +VL A +    +    ++H Y ++ GL+ D  + N ++D+Y KCG++  
Sbjct: 463 SQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKT 522

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +  +F+S+ + DVVSW+S+I  Y   G   EAL+LF  M   +V+ + +T V  L+A S 
Sbjct: 523 AHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSH 582

Query: 475 LSILKKGKELNGFIIRKGFNLEGSV--ASSLVDMYARCGALDIANKVFNCVQ-TKDLILW 531
           + ++++G +L G  + K F +  +    S +VD+ AR G L+ A    + +    D+++W
Sbjct: 583 VGLVEEGWKLYG-TMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVW 641

Query: 532 TSMINANGLHGR---GKVAIDLFYKMEAESFA 560
            +++ A   HG    GK A +   K++  + A
Sbjct: 642 KTLLAACKTHGNVDVGKRAAENILKIDPSNSA 673



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 252/505 (49%), Gaps = 16/505 (3%)

Query: 143 EALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANAL 201
           EA+  F  +Q+  G      T+   + AC        G +IH   +KS  +  + + N +
Sbjct: 45  EAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHI 104

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           + MY +C  + +A  V   +  ++ VSW S++ G+ QN     A++F+ ++  +G  PDQ
Sbjct: 105 LNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQ 164

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
               + + A   LG++  G++LHA+ +K  F + +   N L+ MY K   +     VF +
Sbjct: 165 FTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSR 224

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD-ADVMIIGSVLMACSGLKCMSQ 380
           M  +D ISW ++IAG++Q    L+AL  F+ +  +G+   +  I GSV  ACS L     
Sbjct: 225 MATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEY 284

Query: 381 TKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
            +++HG  I+ GL  D+    ++ D+Y KCG +  +R VF  I   D+V+W ++I+ + +
Sbjct: 285 GRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAY 344

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
            G A EA+  F  M    +  D IT+ S L A +S S L +G +++G+I + G +L+  V
Sbjct: 345 GGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPV 404

Query: 500 ASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
            ++L+ MYA+C  L  A   F  ++   DL+ W +++ A   H + +    L   M    
Sbjct: 405 CNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQ 464

Query: 559 FAPDHITFLALLYACSHSGLINEGKK-----FLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
             PD+IT   +L A + +  I  G +         + CD  +         L+DL  +  
Sbjct: 465 HRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNG------LIDLYAKCG 518

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALL 638
            L+ A++   SM I P    W +L+
Sbjct: 519 SLKTAHKIFDSM-INPDVVSWSSLI 542


>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
          Length = 818

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/635 (36%), Positives = 355/635 (55%), Gaps = 2/635 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG+ LDA+ +F ++       WN M+  +   G+    L  Y +M   G   D +T
Sbjct: 90  MYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYT 149

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP VIKAC  L  +  G  +H  +   G++   F+ +SL+  Y++      AR LFDRM 
Sbjct: 150 FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP 209

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D VLWN +++ Y  +G    A G+F EM+R     N+ TF   L  C        G 
Sbjct: 210 SK-DGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   V SG  +   VAN L+AMYA+CG + +A  +   +   D V+WN M++G+VQN 
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A   F E+  AG KPD +   + +        L  GKE+H Y I+ G   D+ + +
Sbjct: 329 FMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKS 388

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y KC  V    ++F Q T  D +  T +I+GY  N  +  ALE+FR +  E + A
Sbjct: 389 ALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRA 448

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           + + + SVL AC+GL  ++  KE+HG+I++ G      + +AI+D+Y KCG +D +   F
Sbjct: 449 NSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTF 508

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I  KD V W SMI+S   NG   EA++LF  M  A  + D +++ +ALSA ++L  L 
Sbjct: 509 IGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALH 568

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            GKE++ F++R  F  +    S+L+DMY++CG LD+A +VF+ ++ K+ + W S+I A G
Sbjct: 569 YGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYG 628

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HGR K +++LF+ M  +   PDH+TFLA++ AC H+G ++EG  +   M  +  +    
Sbjct: 629 NHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARM 688

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           EHYAC+VDL GRA  L EA+  + SM   P A VW
Sbjct: 689 EHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVW 723



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 226/427 (52%), Gaps = 1/427 (0%)

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
           A   V+ LQ C D S  + G + HA  + +G      +   L+ MY  CG   +A  + Y
Sbjct: 46  APQLVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFY 105

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
           QL    S  WN M+ GF     +  A+ F+ ++ G G  PD+      + A G L ++  
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVAL 165

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +H      GF  D+ +G++L+  Y++  C++    +F +M ++D + W  ++ GY +
Sbjct: 166 GRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK 225

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVI 398
           N     A  +F  ++    + + +    VL  C+    ++   ++HG ++  GL  D  +
Sbjct: 226 NGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPV 285

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            N ++ +Y KCG++  +R +F+ +   D+V+W  MIS YV NG  +EA  LF+ M  A +
Sbjct: 286 ANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGM 345

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           + DSIT  S L   S  + L++GKE++ +IIR G +L+  + S+L+D+Y +C  +++A+K
Sbjct: 346 KPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHK 405

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
           +F+     D+++ T+MI+   L+G    A+++F  +  E    + +T  ++L AC+    
Sbjct: 406 IFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAA 465

Query: 579 INEGKKF 585
           +  GK+ 
Sbjct: 466 LTLGKEL 472



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 53/117 (45%)

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           N +S +  LVS L   +  S L  G++ +  ++  G    G + + L+ MY  CGA   A
Sbjct: 41  NDDSLAPQLVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDA 100

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
             +F  ++      W  MI    + G+   A+  ++KM      PD  TF  ++ AC
Sbjct: 101 KNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKAC 157


>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
          Length = 918

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/695 (35%), Positives = 393/695 (56%), Gaps = 13/695 (1%)

Query: 24  FTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGL 83
           F WN++L +     +    L  + RMR  G     FT P V  A A L  L  GA +H  
Sbjct: 73  FLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAY 132

Query: 84  VLKCGY---DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
            ++ G    D +  + +SLV MYA+C   R A +LFD M E+ DVV W ++IS    +GQ
Sbjct: 133 SVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPER-DVVAWTAVISGCVCNGQ 191

Query: 141 CLEALGLFREMQRV----GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
           C E L     M R     G   N+ T  + L+AC      ++G  +H   VK+G      
Sbjct: 192 CGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPS 251

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V ++L +MY +C    +A  +  +L  KD VSW S++  + +     KA++ F  ++ +G
Sbjct: 252 VVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESG 311

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            +PD+V     ++  G    +  GK  HA  +++ F   + IGN L+ MYAKC  V+   
Sbjct: 312 LQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAA 371

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA---DVMIIGSVLMACS 373
            VF  +  +D  SW++++  Y +    LK LEL+R +Q    D    D   + S++ +CS
Sbjct: 372 TVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCS 431

Query: 374 GLKCMSQTKEIHGYIIRK-GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L  +   +  H Y I+     +  + NA++ +YG+CGN D +R +F  +++KDVV+W++
Sbjct: 432 RLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSA 491

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           +ISSY H G + +AL L+  M    V+ +S TLVS +S+ ++L+ L+ G+ ++  +   G
Sbjct: 492 LISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVG 551

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
              + S+ ++LVDMY +CG L IA K+F+ +  +D++ W  MI+  G+HG    A+ LF 
Sbjct: 552 LECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFS 611

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
            ME  +  P+ +TFLA+L AC H+GL+++G++    M  +Y L+P  +HYAC+VDLLG++
Sbjct: 612 MMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-EYSLEPNLKHYACMVDLLGKS 670

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
            HL+EA   V +M IEP   +W  LLGAC++H N E+G  VAKK    DP N G Y+L+S
Sbjct: 671 GHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMS 730

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           N + ++ KW ++E++R  M+  G++K+ G S I+I
Sbjct: 731 NSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDI 765



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 177/573 (30%), Positives = 301/573 (52%), Gaps = 18/573 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----GISV 56
           MY +CGSV DA +LFD++ +R V  W A++   V NG+    L    RM       G   
Sbjct: 154 MYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARP 213

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           ++ T    ++AC +L +L  G  +HG  +K G      +V+SL +MY KC     AR LF
Sbjct: 214 NSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILF 273

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
             + EK D+V W S+I AY  +G   +A+ LF  M+  GL  +       L    + +  
Sbjct: 274 PELPEK-DLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G   HAA V+      V + NALI+MYA+C ++  AA V   L  +D+ SW+SM+  +
Sbjct: 333 RGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAY 392

Query: 237 VQNDLYCKAMQFFRELQGAGQKP---DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            +  L  K ++ +RE+Q   +     D    ++ +S+  RLG L  G+  H Y+IK    
Sbjct: 393 CKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAG 452

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            +  + N L+ MY +C   +   ++F  +  +D ++W+ +I+ Y+       AL L+  +
Sbjct: 453 ENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQM 512

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
             EG+  +   + SV+ +C+ L  +   + IH ++   GL  DL I  A+VD+Y KCG +
Sbjct: 513 LTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQL 572

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
             +R +F+S+  +DVV+W  MIS Y  +G A +AL+LF +M   NV+ +S+T ++ LSA 
Sbjct: 573 GIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSAC 632

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLI 529
               ++ KG+EL  F   + ++LE ++   + +VD+  + G L  A  V + +  + D  
Sbjct: 633 CHAGLVDKGREL--FTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGG 690

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           +W +++ A  +H   ++ +    ++  ++FA D
Sbjct: 691 IWGTLLGACKMHDNFEMGL----RVAKKAFASD 719



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 241/472 (51%), Gaps = 11/472 (2%)

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D  LWNS++ +   +      L   R M+  G   + +T      A  +     +G  +
Sbjct: 70  PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129

Query: 183 HAATVKSG---QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           HA +V+ G    +  V VA++L+ MYARCG + +A  +  ++  +D V+W ++++G V N
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189

Query: 240 DLYCKAMQFF----RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
               + + +     R     G +P+     + + A G LG L  G  LH + +K G    
Sbjct: 190 GQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHC 249

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             + ++L  MY KC        +F ++  +D +SWT++I  Y +     KA+ELF  ++ 
Sbjct: 250 PSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDY 414
            GL  D ++I  +L        +   K  H  I+R+   D V++ NA++ +Y KC  +D 
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDI 369

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM---NEANVESDSITLVSALSA 471
           +  VF  +  +D  SW+SM+ +Y   GL  + LEL+  M   ++   E D+ +L+S +S+
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISS 429

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            S L  L+ G+  + + I+       SVA++L+ MY RCG  D+A K+F  V+TKD++ W
Sbjct: 430 CSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTW 489

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           +++I++    G  K A+ L+ +M  E   P+  T ++++ +C++   +  G+
Sbjct: 490 SALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE 541



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 193/382 (50%), Gaps = 8/382 (2%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  V SG + +   A  L++ Y+  G    AA         D+  WNS+L    +   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV---SDLQI 298
           +   +   R ++ +G +P +       SA+  LG L  G  +HAY+++ G +     + +
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL----ELFRTVQ 354
            ++L+ MYA+C  V    R+F +M  +D ++WT +I+G   N    + L     + R+  
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNID 413
             G   +   + S L AC  L  +S    +HG+ ++ G+     +++++  +Y KC + +
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +R +F  +  KD+VSWTS+I +Y   G A +A+ELF  M E+ ++ D + +   L+   
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
           + + ++ GK  +  I+R+ F     + ++L+ MYA+C  +DIA  VF  +  +D   W+S
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387

Query: 534 MINANGLHGRGKVAIDLFYKME 555
           M+ A    G     ++L+ +M+
Sbjct: 388 MVVAYCKAGLDLKCLELYREMQ 409


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/709 (34%), Positives = 392/709 (55%), Gaps = 9/709 (1%)

Query: 22  TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIH 81
           T  + NA +  + + G   +VL TY+ M    +  DA+TFP ++KAC+ L     G  +H
Sbjct: 25  TTNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLH 84

Query: 82  GLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQC 141
             +L  G     +I +SL+  YAK      AR++FD M E+ +VV W +II  YS +G+ 
Sbjct: 85  QRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPER-NVVPWTTIIGCYSRTGRV 143

Query: 142 LEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANAL 201
            EA  LF EM+R G+  ++ T ++ L    + +       +H   +  G    + ++N++
Sbjct: 144 PEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQC---LHGCAILYGFMSDINLSNSM 200

Query: 202 IAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR--ELQGAGQKP 259
           + +Y +CG +  +  +   ++++D VSWNS+++ + Q    C+ +   +   LQG    P
Sbjct: 201 LNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGP 260

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
               +V +V+AS   G L  G+ LH   ++ GF  D  +  +L+ +Y K   ++   R+F
Sbjct: 261 QTFGSVLSVAASR--GELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMF 318

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
            + + +D + WT +I+G  QN    KAL +FR +   G+      + SV+ AC+ L   +
Sbjct: 319 ERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYN 378

Query: 380 QTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
               I GYI+R+ L  D+   N++V +Y KCG++D S  VF+ +  +D+VSW +M++ Y 
Sbjct: 379 LGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYA 438

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            NG   EAL LF  M   N   DSIT+VS L   +S   L  GK ++ F+IR G      
Sbjct: 439 QNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCIL 498

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
           V +SLVDMY +CG LD A + FN + + DL+ W+++I   G HG+G+ A+  + K     
Sbjct: 499 VDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESG 558

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
             P+H+ FL++L +CSH+GL+ +G    E M  D+ + P  EH+AC+VDLL RA  +EEA
Sbjct: 559 MKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEA 618

Query: 619 YQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
           Y   +    +P  +V   +L ACR + N ELG+ +A  +L L P + GN+V +++ +A+ 
Sbjct: 619 YNVYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDILMLRPMDAGNFVQLAHCYASI 678

Query: 679 RKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEI 727
            KW++V +    MR  GLKK PG S+I+I   I +F     SH +  EI
Sbjct: 679 NKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEI 727



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 269/523 (51%), Gaps = 10/523 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G    A ++FD + +R V  W  ++G Y   G        +  MR  GI   + T 
Sbjct: 106 YAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTV 165

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++   + L  + C   +HG  +  G+ S   + NS++ +Y KC +   +R+LFD M +
Sbjct: 166 LSLLFGVSELAHVQC---LHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYM-D 221

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D+V WNS+ISAY+  G   E L L + M+  G      TF + L          LG  
Sbjct: 222 HRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRC 281

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +++G  L  +V  +LI +Y + GK+  A  +  +  +KD V W +M++G VQN  
Sbjct: 282 LHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGS 341

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA+  FR++   G KP      + ++A  +LG+   G  +  Y ++Q    D+   N+
Sbjct: 342 ADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNS 401

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ MYAKC  ++    VF  M  +D +SW  ++ GYAQN    +AL LF  ++ +    D
Sbjct: 402 LVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPD 461

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNVFE 420
            + I S+L  C+    +   K IH ++IR GL   ++++ ++VD+Y KCG++D ++  F 
Sbjct: 462 SITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFN 521

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            + S D+VSW+++I  Y ++G    AL  +    E+ ++ + +  +S LS+ S   ++++
Sbjct: 522 QMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQ 581

Query: 481 GKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVF 520
           G  LN +  + K F +   +   + +VD+ +R G ++ A  V+
Sbjct: 582 G--LNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVY 622



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 218/422 (51%), Gaps = 3/422 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +YGKCG++  + +LFD +  R + +WN+++ AY   G    VL     MR+ G      T
Sbjct: 203 VYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQT 262

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+   A   +L  G  +HG +L+ G+     +  SL+ +Y K      A ++F+R  
Sbjct: 263 FGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSS 322

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K DVVLW ++IS    +G   +AL +FR+M + G+  +  T  + + AC       LG 
Sbjct: 323 DK-DVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGT 381

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            I    ++    L V   N+L+ MYA+CG + +++ V   +  +D VSWN+M+TG+ QN 
Sbjct: 382 SILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNG 441

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             C+A+  F E++   Q PD +  V+ +      G L  GK +H++ I+ G    + +  
Sbjct: 442 YVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDT 501

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMY KC  ++   R F QM + D +SW+ II GY  +     AL  +      G+  
Sbjct: 502 SLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKP 561

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLS-DLVILNAIVDVYGKCGNIDYSRNV 418
           + +I  SVL +CS    + Q   I+  + +  G++ DL     +VD+  + G ++ + NV
Sbjct: 562 NHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNV 621

Query: 419 FE 420
           ++
Sbjct: 622 YK 623


>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
 gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
 gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
 gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/618 (36%), Positives = 355/618 (57%), Gaps = 34/618 (5%)

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC- 309
           +L G  +KP      N +    +   L  GK++H +    GFV  + I N L+ MYAKC 
Sbjct: 75  QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134

Query: 310 -----------------CCVNYM-------------GRVFYQMTAQDFISWTTIIAGYAQ 339
                            C  N M              ++F +MT +D  SWT ++ GY +
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194

Query: 340 NNCHLKALELFRTVQ-LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLV 397
            +   +AL L+  +Q +     ++  +   + A + +KC+ + KEIHG+I+R GL SD V
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           + ++++D+YGKCG ID +RN+F+ I  KDVVSWTSMI  Y  +    E   LF  +  + 
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
              +  T    L+A + L+  + GK+++G++ R GF+     +SSLVDMY +CG ++ A 
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAK 374

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            V +     DL+ WTS+I     +G+   A+  F  +      PDH+TF+ +L AC+H+G
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L+ +G +F   +   ++L    +HY CLVDLL R+   E+    +  M ++P+  +W ++
Sbjct: 435 LVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           LG C  + N +L E  A++L +++P NP  YV ++N++AA+ KW++  ++R RM+  G+ 
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K PGSSW EI  K H FIA D SH   ++I + L E+ +K++ E GYV  T  VLH+VE+
Sbjct: 555 KRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEE-GYVPATSLVLHDVED 613

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           E+K + L  HSE+LA+A+ +L + EG+ I++ KNLR CVDCH   K +S +  R++ VRD
Sbjct: 614 EQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRD 673

Query: 818 ANRFHHFEAGVCSCGDYW 835
           + RFH FE G CSCGDYW
Sbjct: 674 STRFHCFENGQCSCGDYW 691



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 174/339 (51%), Gaps = 6/339 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFT 60
           Y + G + +A +LFD+++++  ++W AM+  YV   +P   L  YS M RV     + FT
Sbjct: 161 YAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT 220

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + A A +K +  G +IHG +++ G DS + + +SL+ MY KC    +AR +FD++ 
Sbjct: 221 VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV 280

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK DVV W S+I  Y  S +  E   LF E+       N YTF   L AC D + E LG 
Sbjct: 281 EK-DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGK 339

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H    + G +   + +++L+ MY +CG +  A  V+      D VSW S++ G  QN 
Sbjct: 340 QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG 399

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+++F  L  +G KPD V  VN +SA    G +  G E      ++  +S      
Sbjct: 400 QPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY 459

Query: 301 T-LMDMYAKCCCVNYMGRVFYQMTAQD--FISWTTIIAG 336
           T L+D+ A+      +  V  +M  +   F+ W +++ G
Sbjct: 460 TCLVDLLARSGRFEQLKSVISEMPMKPSKFL-WASVLGG 497



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 205/456 (44%), Gaps = 46/456 (10%)

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC---YDFRK--- 111
           A T+  +I+ C+  + L+ G K+H  +   G+     I N L+ MYAKC    D RK   
Sbjct: 85  ASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFD 144

Query: 112 -------------------------ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALG 146
                                    AR+LFD M EK D   W ++++ Y    Q  EAL 
Sbjct: 145 EMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK-DSYSWTAMVTGYVKKDQPEEALV 203

Query: 147 LFREMQRV-GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
           L+  MQRV     N +T   A+ A         G EIH   V++G +    + ++L+ MY
Sbjct: 204 LYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY 263

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
            +CG + EA  +  ++  KD VSW SM+  + ++  + +    F EL G+ ++P++    
Sbjct: 264 GKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFA 323

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
             ++A   L     GK++H Y  + GF       ++L+DMY KC  +     V       
Sbjct: 324 GVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKP 383

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           D +SWT++I G AQN    +AL+ F  +   G   D +   +VL AC+    + +  E  
Sbjct: 384 DLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 443

Query: 386 GYIIRK----GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV-VSWTSMI---SSY 437
             I  K      SD      +VD+  + G  +  ++V   +  K     W S++   S+Y
Sbjct: 444 YSITEKHRLSHTSDH--YTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY 501

Query: 438 VHNGLANEAL-ELFYLMNEANVESDSITLVSALSAA 472
            +  LA EA  ELF +  E  V    +T+ +  +AA
Sbjct: 502 GNIDLAEEAAQELFKIEPENPV--TYVTMANIYAAA 535



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 7/189 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A+ + D   +  + +W +++G    NG+P   L+ +  +   G   D  T
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC     ++ G +  + +  K     T      LV + A+   F + + +   M
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482

Query: 120 GEKEDVVLWNSIISAYSASG------QCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
             K    LW S++   S  G      +  + L        V  VT A  + AA +  E+ 
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEG 542

Query: 174 SFETLGMEI 182
                  EI
Sbjct: 543 KMRKRMQEI 551


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/697 (32%), Positives = 398/697 (57%), Gaps = 12/697 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-------FIVNSLVAMYAKCYDFRKAR 113
           +  ++ AC+ L+ L  G ++H  ++     S D        + N L+ MY +C     AR
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           Q+FD M  +  V  W S+I+A+  +G+  +ALGLF  M R G   + +   +A++AC + 
Sbjct: 107 QVFDEMPARNPVS-WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTEL 165

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                G ++HA  +KS +   + V NAL+ MY++ G + +   +  ++++KD +SW S++
Sbjct: 166 GDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSII 225

Query: 234 TGFVQNDLYCKAMQFFRELQGAG-QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
            GF Q     +A+Q FR++   G   P++    +A  A G +G+   G+++H  +IK   
Sbjct: 226 AGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRL 285

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
             DL +G +L DMYA+   ++     FY++ A D +SW +I+  Y+      +AL LF  
Sbjct: 286 DRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 345

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGN 411
           ++  GL  D + +  +L AC G   +   + IH Y+++ GL  D+ + N+++ +Y +C +
Sbjct: 346 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 405

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           +  + +VF  I+ +DVV+W S++++   +    E L+LF L+N++    D I+L + LSA
Sbjct: 406 LSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSA 465

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKDLIL 530
           ++ L   +  K+++ +  + G   +  ++++L+D YA+CG+LD A ++F  +   +D+  
Sbjct: 466 SAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFS 525

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W+S+I      G  K A+DLF +M +    P+H+TF+ +L ACS  G +NEG  +  IM 
Sbjct: 526 WSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIME 585

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
            +Y + P  EH +C+VDLL RA  L EA  F+  M  EP   +W  LL A ++H++ E+G
Sbjct: 586 PEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMG 645

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
           +  A+ +L +DP +   YVL+ N++AAS  W +  +++  MR SG+KK+PG SW+++  +
Sbjct: 646 KRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGE 705

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQ 747
           +  FI  D+SH ES+EIY  L  I  ++ +  GYV +
Sbjct: 706 LKVFIVEDRSHPESEEIYAMLELIGMEMIK-AGYVPK 741



 Score =  279 bits (713), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 180/601 (29%), Positives = 304/601 (50%), Gaps = 19/601 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYG+C +   A Q+FD++  R   +W +++ A+V NG     L  +S M   G + D F 
Sbjct: 95  MYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFA 154

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               ++AC  L D+  G ++H   LK    S   + N+LV MY+K         LF+R+ 
Sbjct: 155 LGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIK 214

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL-VTNAYTFVAALQACEDSSFETLG 179
           +K D++ W SII+ ++  G  +EAL +FR+M   G    N + F +A +AC        G
Sbjct: 215 DK-DLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYG 273

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH  ++K   +  +YV  +L  MYAR   +  A    Y++E  D VSWNS++  +   
Sbjct: 274 EQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVE 333

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L  +A+  F E++ +G +PD +     + A      L +G+ +H+Y +K G   D+ + 
Sbjct: 334 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 393

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+ MYA+C  ++    VF+++  QD ++W +I+   AQ+N   + L+LF  +      
Sbjct: 394 NSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPS 453

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D + + +VL A + L      K++H Y  + GL  D ++ N ++D Y KCG++D +  +
Sbjct: 454 LDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRL 513

Query: 419 FESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           FE +  ++DV SW+S+I  Y   G A EAL+LF  M    +  + +T +  L+A S +  
Sbjct: 514 FEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGF 573

Query: 478 LKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDLILWTSMI 535
           + +G      +  + G        S +VD+ AR G L + AN +       D+I+W +++
Sbjct: 574 VNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLL 633

Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALL---YACSHSGLINEGKKFLEIM 589
            A+ +H     GK A +    ++     P H     LL   YA   SG  NE  +  + M
Sbjct: 634 AASKMHNDMEMGKRAAEGILNID-----PSHSAAYVLLCNIYAA--SGNWNEFARLKKAM 686

Query: 590 R 590
           R
Sbjct: 687 R 687


>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/560 (40%), Positives = 341/560 (60%), Gaps = 5/560 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYA 338
           G++LHA  +  G   D  +   L+D+YA C  V+   RVF +M  Q +   W  +I  YA
Sbjct: 87  GRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPNQGNVFLWNVLIRAYA 146

Query: 339 QNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDL 396
           ++     A+EL+R +   G +  D      VL AC+ L  +S  +E+H  ++R    +D+
Sbjct: 147 RDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDV 206

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            +   ++D+Y KCG +D +  VF     +D   W SMI++   NG   EAL L   M   
Sbjct: 207 FVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAAE 266

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +     TLVSA+SAA+  S L +G+EL+G+  R+GF  +  + +SL+DMYA+ G + +A
Sbjct: 267 GIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVA 326

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSH 575
           + +F  +  ++LI W +MI   G+HG    A +LF +M +E+   PDHITF+ +L AC+H
Sbjct: 327 HVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNH 386

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
            G++ E K+  ++M   Y + P  +HY CLVD+LG +   +EA   ++ M ++P + +W 
Sbjct: 387 GGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWG 446

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL  C++H N EL E+  +KL+EL+P + GNYVL+SN++A S KW++  +VR  M   G
Sbjct: 447 ALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMTNRG 506

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           LKK    SWIE+  K H F+  D SH  SD+IY++L E  E L  + GYV  T  V HNV
Sbjct: 507 LKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEEL-ERLEGLISQTGYVPDTTPVFHNV 565

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           E++EK  M++GHSERLAIA+G++ +   + + +TKNLRVC DCH   KL+S++  RE+++
Sbjct: 566 EDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCEDCHVVIKLISQIEQREIII 625

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD NR+HHF  G CSC D+W
Sbjct: 626 RDVNRYHHFVNGECSCKDHW 645



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 201/422 (47%), Gaps = 12/422 (2%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++++C + + +  G ++H  +L  G      +   LV +YA C     AR++FD M 
Sbjct: 71  YATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMP 130

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLG 179
            + +V LWN +I AY+  G C  A+ L+R M   G +  + +T+   L+AC      + G
Sbjct: 131 NQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAG 190

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            E+H   +++     V+V   LI MYA+CG M EA  V      +D+  WNSM+    QN
Sbjct: 191 REVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQN 250

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+   R +   G  P     V+A+SA+     L  G+ELH Y  ++GF S  ++ 
Sbjct: 251 GRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLK 310

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-L 358
            +L+DMYAK   V     +F Q+  ++ ISW  +I G+  +     A ELF  ++ E  +
Sbjct: 311 TSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQV 370

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHG-----YIIRKGLSDLVILNAIVDVYGKCGNID 413
             D +    VL AC+    + + KE+       Y I+  +     L   VDV G  G   
Sbjct: 371 MPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCL---VDVLGHSGRFK 427

Query: 414 YSRNVFESIESK-DVVSWTSMISS-YVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
            + +V + +  K D   W ++++   +H  +    L L  L+     ++ +  L+S + A
Sbjct: 428 EASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYA 487

Query: 472 AS 473
            S
Sbjct: 488 ES 489



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 207/444 (46%), Gaps = 33/444 (7%)

Query: 1   MYGKCGSVLDAEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDA 58
           +Y  CG V  A ++FD++ +Q  VF WN ++ AY  +G     +E Y  M   G +  D 
Sbjct: 112 LYASCGHVSLARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDN 171

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           FT+P V+KACA L DL  G ++H  V++  + +  F+   L+ MYAKC    +A  +F+ 
Sbjct: 172 FTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFND 231

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
              + D  +WNS+I+A   +G+  EAL L R M   G+     T V+A+ A   +S    
Sbjct: 232 TTIR-DAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPR 290

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G E+H    + G   Q  +  +L+ MYA+ G +  A  +  QL +++ +SWN+M+ GF  
Sbjct: 291 GRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGM 350

Query: 239 NDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           +     A + F  ++   Q  PD +  V  +SA    G +   KE+         V+   
Sbjct: 351 HGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDL-----MVTVYS 405

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAG-YAQNNCHLKA 346
           I  T+       C V+ +G       A D I           W  ++ G     N  L  
Sbjct: 406 IKPTVQHY---TCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAE 462

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVY 406
           L L + ++LE  DA   ++ S + A SG     +   +   +  +GL   +I  + +++ 
Sbjct: 463 LALQKLIELEPEDAGNYVLLSNIYAESGK--WEEAARVRKLMTNRGLKK-IIACSWIELK 519

Query: 407 GK-----CGNIDYSR--NVFESIE 423
           GK      G+  + R  +++E +E
Sbjct: 520 GKFHGFLVGDASHPRSDDIYEELE 543



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 92/169 (54%), Gaps = 10/169 (5%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           ++ G++L+  ++  G  L+  +A+ LVD+YA CG + +A +VF+ +  + ++ LW  +I 
Sbjct: 84  VRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPNQGNVFLWNVLIR 143

Query: 537 ANGLHGRGKVAIDLFYKMEA-ESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQ 594
           A    G  + AI+L+  M A  S  PD+ T+  +L AC+    ++ G++  + +MR ++ 
Sbjct: 144 AYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWA 203

Query: 595 LDPWPEHYAC--LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
            D     + C  L+D+  +   ++EA+       I   A VW +++ AC
Sbjct: 204 TDV----FVCTGLIDMYAKCGCMDEAWAVFNDTTIR-DAAVWNSMIAAC 247


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/701 (33%), Positives = 394/701 (56%), Gaps = 21/701 (2%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M+  G+V + +   + + AC        G  +H   + +G    + +  AL+ MYA+CG 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           + +A  V   +E KD  +W+S+++ + +      A+  +R +   G +P+ V    A+  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
              +  L +G+ +H   +      D  + ++L++MY KC  +    +VF  M A++  S+
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180

Query: 331 TTIIAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           T +I+ Y Q   H +ALELF R  ++E ++ +     ++L A  GL  + + +++H ++ 
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240

Query: 390 RKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
            +G  +++V+ NA+V +YGKCG+   +R VF+S+ +++V+SWTSMI++Y  +G   EAL 
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
           LF  M+   VE   ++  SAL+A + L  L +G+E++  ++         + +SL+ MYA
Sbjct: 301 LFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYA 356

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           RCG+LD A +VFN ++T+D     +MI A   HGR K A+ ++ +ME E    D ITF++
Sbjct: 357 RCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVS 416

Query: 569 LLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           +L ACSH+ L+ + + F + +  D+ + P  EHY C+VD+LGR+  L +A + V +M  +
Sbjct: 417 VLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQ 476

Query: 629 PTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVR 688
             A  W  LL  C+ H +   GE  A+K+ EL P     YV +SN++AA++++ D  +VR
Sbjct: 477 TDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVR 536

Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIA--RDKSHSESD-----EIYKKLAEITEKLERE 741
             M   G+      S+IEI N++H F +  RD+     D      +   L E+ E + ++
Sbjct: 537 KEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPM-KQ 595

Query: 742 GGYVAQTQFVL----HNVEEEEKVQMLYGHSERLAIAYGVLKST---EGSLIRITKNLRV 794
            GYV  T+ V         EEEK + L  HSERLAIAYG++ +    +   +R+  + RV
Sbjct: 596 AGYVPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRV 655

Query: 795 CVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           C DCHS  KL+S +  + + VRD NRFHHFE G CSCGD+W
Sbjct: 656 CSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 274/532 (51%), Gaps = 12/532 (2%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M   GI  D F    ++ AC  L+ L+ G ++H  ++  G+ +   +  +L+ MYAKC  
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
              A+++F+ M E +D+  W+SIISAY+ +G+   A+ L+R M   G+  N  TF  AL 
Sbjct: 61  LDDAKRVFEGM-EIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALG 119

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
            C   +    G  IH   + S       + ++L+ MY +C +M EA  V   ++ ++  S
Sbjct: 120 GCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRS 179

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           + +M++ +VQ   + +A++ F  +      +P+       + A   LGNL  G+++H + 
Sbjct: 180 YTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHL 239

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
             +GF +++ + N L+ MY KC       +VF  MTA++ ISWT++IA YAQ+    +AL
Sbjct: 240 ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEAL 299

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYG 407
            LF+ + +E      +   S L AC+ L  + + +EIH  ++   L+   +  +++ +Y 
Sbjct: 300 NLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETSLLSMYA 356

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           +CG++D +R VF  ++++D  S  +MI+++  +G   +AL ++  M +  + +D IT VS
Sbjct: 357 RCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVS 416

Query: 468 ALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
            L A S  S++   ++     ++  G          +VD+  R G L  A ++   +  +
Sbjct: 417 VLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQ 476

Query: 527 -DLILWTSMINANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            D + W ++++    HG   RG+ A    +++      P    FL+ +YA +
Sbjct: 477 TDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLP--YVFLSNMYAAA 526



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 235/448 (52%), Gaps = 9/448 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA+++F+ +  + +F W++++ AY   G     +  Y RM   G+  +  T
Sbjct: 54  MYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVT 113

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F C +  CA +  L  G  IH  +L       D + +SL+ MY KC +  +AR++F+ M 
Sbjct: 114 FACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMK 173

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLG 179
            + +V  + ++ISAY  +G+  EAL LF  M +V  +  NAYTF   L A E       G
Sbjct: 174 AR-NVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKG 232

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H      G +  V V NAL+ MY +CG   EA  V   +  ++ +SW SM+  + Q+
Sbjct: 233 RKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQH 292

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  F+ +     +P  V   +A++A   LG L  G+E+H + + +  ++  Q+ 
Sbjct: 293 GNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIH-HRVVEAHLASPQME 348

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            +L+ MYA+C  ++   RVF +M  +D  S   +IA + Q+    +AL ++R ++ EG+ 
Sbjct: 349 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIP 408

Query: 360 ADVMIIGSVLMACSGLKCMSQTKE-IHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRN 417
           AD +   SVL+ACS    ++  ++     ++  G+  LV     +VDV G+ G +  +  
Sbjct: 409 ADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEE 468

Query: 418 VFESIE-SKDVVSWTSMISSYVHNGLAN 444
           + E++    D V+W +++S    +G  N
Sbjct: 469 LVETMPYQTDAVAWMTLLSGCKRHGDLN 496


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/687 (34%), Positives = 380/687 (55%), Gaps = 38/687 (5%)

Query: 182 IHAATVKSGQNLQVYVANALI---AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           IHA  +K+G +   Y  + LI    +      +T A  V   ++  + + WN+M  G   
Sbjct: 21  IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHAL 80

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A+  +  +   G  P+       + A  +      G+++H + +K G   DL +
Sbjct: 81  SSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYV 140

Query: 299 GNTLMDMYAKCC----------------CVNYMG---------------RVFYQMTAQDF 327
             +L+ MY K                   V+Y                 ++F ++  +D 
Sbjct: 141 HTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDV 200

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SW  +I+GYA+   + +ALELF+ +    +  D   + +VL AC+    +   +++H +
Sbjct: 201 VSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSW 260

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           I   G  S+L I+NA++D+Y KCG ++ +  +FE +  KDV+SW ++I  Y H  L  EA
Sbjct: 261 IDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR--KGFNLEGSVASSLV 504
           L LF  M  +    + +T++S L A + L  +  G+ ++ +I +  KG +   S+ +SL+
Sbjct: 321 LLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLI 380

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMYA+CG ++ A +VF+ +  + L  W +MI    +HGR   A D+F +M  +   PD I
Sbjct: 381 DMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDI 440

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
           TF+ LL ACSHSG+++ G+     M  DY++ P  EHY C++DLLG +   +EA + + S
Sbjct: 441 TFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINS 500

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           M+++P   +WC+LL AC++H N ELGE  A+ L++++P N G+YVL+SN++A + +W +V
Sbjct: 501 MEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEV 560

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            + R  +   G+KK PG S IEI + +H FI  DK H  + EIY  L E  E L  E G+
Sbjct: 561 AKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEE-MEVLLEEAGF 619

Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
           V  T  VL  +EEE K   L  HSE+LAIA+G++ +  G+ + I KNLRVC +CH   KL
Sbjct: 620 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 679

Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSC 831
           +S+++ RE++ RD  RFHHF  GVCSC
Sbjct: 680 ISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 269/522 (51%), Gaps = 51/522 (9%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV--AMYAKCYD-FRKARQLFDRMG 120
           ++  C  L+ L     IH  ++K G  +T++ ++ L+  ++ +  +D    A  +FD + 
Sbjct: 8   LLHNCKTLQSLRI---IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQ 64

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  ++++WN++   ++ S   + AL L+  M  +GLV N+YTF   L+AC  S     G 
Sbjct: 65  EP-NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQ 123

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ-------------------- 220
           +IH   +K G +L +YV  +LIAMY + G+  +A  V  Q                    
Sbjct: 124 QIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNG 183

Query: 221 -----------LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
                      +  KD VSWN++++G+ +   Y +A++ F+E+     KPD+   V  +S
Sbjct: 184 YIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLS 243

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A  +  ++  G+++H++    GF S+L+I N L+D+Y KC  V     +F  ++ +D IS
Sbjct: 244 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVIS 303

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W T+I GY   N + +AL LF+ +   G   + + + S+L AC+ L  +   + IH YI 
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYID 363

Query: 390 R--KGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           +  KG+S+   L  +++D+Y KCG+I+ ++ VF+S+ ++ + SW +MI  +  +G AN A
Sbjct: 364 KRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPA 423

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL-----NGFIIRKGFNLEGSVAS 501
            ++F  M +  +E D IT V  LSA S   +L  G+ +       + I       G    
Sbjct: 424 FDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYG---- 479

Query: 502 SLVDMYARCGALDIANKVFNCVQT-KDLILWTSMINANGLHG 542
            ++D+    G    A ++ N ++   D ++W S++ A  +HG
Sbjct: 480 CMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG 521



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 229/465 (49%), Gaps = 43/465 (9%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +FD + +  +  WN M   +  + +P+  L  Y  M  LG+  +++TFP ++KACA 
Sbjct: 56  AISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAK 115

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------- 123
            K    G +IHG VLK G D   ++  SL+AMY K      AR++FD+   ++       
Sbjct: 116 SKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTAL 175

Query: 124 -----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
                                  DVV WN++IS Y+ +G   EAL LF+EM +  +  + 
Sbjct: 176 IKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDE 235

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            T V  L AC  S+   LG ++H+     G    + + NALI +Y +CG++  A+G+   
Sbjct: 236 STMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEG 295

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           L  KD +SWN+++ G+   +LY +A+  F+E+  +G+ P++V  ++ + A   LG +  G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIG 355

Query: 281 KELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           + +H Y  K  +G  +   +  +L+DMYAKC  +    +VF  M  +   SW  +I G+A
Sbjct: 356 RWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFA 415

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
            +     A ++F  ++ +G++ D +    +L ACS     S   ++  +I R    D  I
Sbjct: 416 MHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACS----HSGMLDLGRHIFRSMTEDYKI 471

Query: 399 LNAI------VDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
              +      +D+ G  G    +  +  S+E   D V W S++ +
Sbjct: 472 TPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKA 516



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 137/284 (48%), Gaps = 3/284 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  A+++FD++  + V +WNA++  Y   G     LE +  M    +  D  T 
Sbjct: 179 YASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTM 238

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA    ++ G ++H  +   G+ S   IVN+L+ +Y KC +   A  LF+ +  
Sbjct: 239 VTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSY 298

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN++I  Y+      EAL LF+EM R G   N  T ++ L AC       +G  
Sbjct: 299 K-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRW 357

Query: 182 IHAATVK--SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           IH    K   G +    +  +LI MYA+CG +  A  V   + N+   SWN+M+ GF  +
Sbjct: 358 IHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMH 417

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
                A   F  ++  G +PD +  V  +SA    G L  G+ +
Sbjct: 418 GRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  LF+ +S + V +WN ++G Y         L  +  M   G S +  T
Sbjct: 279 LYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVT 338

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++ ACA L  +D G  IH  + K   G  +   +  SL+ MYAKC D   A+Q+FD 
Sbjct: 339 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDS 398

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  +  +  WN++I  ++  G+   A  +F  M++ G+  +  TFV  L AC  S    L
Sbjct: 399 MLNRS-LSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDL 457

Query: 179 GMEIHAATV---KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           G  I  +     K    L+ Y    +I +    G   EA  ++  +E + D V W S+L
Sbjct: 458 GRHIFRSMTEDYKITPKLEHY--GCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLL 514



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 13/147 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A+Q+FD +  R++ +WNAM+  +  +G      + +SRMR  GI  D  T
Sbjct: 382 MYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDIT 441

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD-------FRKAR 113
           F  ++ AC+    LD G  I   +      + D+ +   +  Y    D       F++A 
Sbjct: 442 FVGLLSACSHSGMLDLGRHIFRSM------TEDYKITPKLEHYGCMIDLLGHSGLFKEAE 495

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQ 140
           ++ + M    D V+W S++ A    G 
Sbjct: 496 EMINSMEMDPDGVIWCSLLKACKMHGN 522


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/653 (35%), Positives = 375/653 (57%), Gaps = 7/653 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++K     + L    ++H  ++  G  S D I + LVA YA C     AR+LFD + 
Sbjct: 24  YQSLLKHYGAAQSLTSTKQLHAHLITSGLLSID-IRSVLVATYAHCGYVHNARKLFDELR 82

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLG 179
           ++   +L+N +I  Y A G   EA+ +F EM        + YT+   ++AC +      G
Sbjct: 83  QR-GTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYG 141

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H  T+ S     ++V N+L+AMY  CG++ EA  V   ++ K  VSWN+M+ G+ +N
Sbjct: 142 RVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKN 201

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A+  F ++  +G + D    V+ + A G L  L  G+ +H   +++  +    + 
Sbjct: 202 GFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGL-VEEKVLGKKIVS 260

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+DMYAKC  ++    VF  M  +D +SWT++I GY  N     AL LF+ +Q+EGL 
Sbjct: 261 NALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLR 320

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            + + I  +L+AC+ L  +   + +HG+++++ L S++ +  +++D+Y KC  +  S +V
Sbjct: 321 PNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSV 380

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F     K  V W +++S  VHN LA EA+ LF  M    VE ++ T  S L A   L+ L
Sbjct: 381 FTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADL 440

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC--VQTKDLILWTSMIN 536
           +    +N +++R GF     VA+SL+D+Y++CG+L+ A+K+FN   V  +D+ +W+ +I 
Sbjct: 441 QPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIA 500

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
             G+HG G+ A+ LF +M      P+ +TF ++L +CSH+G++++G    + M  D+Q  
Sbjct: 501 GYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTI 560

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  +HY C+VDLLGRA  ++EAY  +++M   P   VW ALLGAC +H N ELGE+ A+ 
Sbjct: 561 PNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARW 620

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
           L EL+PGN GNYVL++ ++AA  +W+D E VR RM   GL+K P  S IE G 
Sbjct: 621 LFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIEAGT 673



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 172/585 (29%), Positives = 311/585 (53%), Gaps = 23/585 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS---VDA 58
           Y  CG V +A +LFD++ QR    +N M+  Y++ G+    ++ +  M  LG      D 
Sbjct: 65  YAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEM--LGSKDCCPDN 122

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           +T+P VIKAC+ L  ++ G  +HGL L   + S  F++NSL+AMY  C +  +AR++FD 
Sbjct: 123 YTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDA 182

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M EK  VV WN++I+ Y  +G    AL +F +M   G+  +  + V+ L AC       +
Sbjct: 183 MKEKS-VVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEV 241

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  +H    +     ++ V+NAL+ MYA+CG M EA  V   +  +D VSW SM+ G++ 
Sbjct: 242 GRRVHGLVEEKVLGKKI-VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYIL 300

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N     A+  F+ +Q  G +P+ V     + A   L NL +G+ LH + +KQ   S++ +
Sbjct: 301 NGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAV 360

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             +L+DMYAKC C+     VF + + +  + W  +++G   N    +A+ LF+ + +EG+
Sbjct: 361 ETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGV 420

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRN 417
           + +     S+L A   L  +     I+ Y++R G +S++ +  +++D+Y KCG+++ +  
Sbjct: 421 EINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHK 480

Query: 418 VFESI--ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           +F +I  + +D+  W+ +I+ Y  +G    A+ LF  M ++ V+ + +T  S L + S  
Sbjct: 481 IFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHA 540

Query: 476 SILKKGKELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIANKVFNCVQTKDLI----L 530
            ++  G  L  F+++    +      + +VD+  R G +D A   ++ ++T   +    +
Sbjct: 541 GMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEA---YDLIKTMPFMPGHAV 597

Query: 531 WTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
           W +++ A  +H     G+VA    +++E  +    +   LA LYA
Sbjct: 598 WGALLGACVMHENVELGEVAARWLFELEPGNTG--NYVLLAKLYA 640



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 225/427 (52%), Gaps = 6/427 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG V +A ++FD + +++V +WN M+  Y  NG     L  +++M   G+ +D  +
Sbjct: 166 MYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGAS 225

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC  LK+L+ G ++HGLV +        + N+LV MYAKC    +AR +FD M 
Sbjct: 226 VVSVLPACGYLKELEVGRRVHGLVEE-KVLGKKIVSNALVDMYAKCGSMDEARLVFDNMV 284

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DVV W S+I+ Y  +G    AL LF+ MQ  GL  N+ T    L AC   +    G 
Sbjct: 285 ER-DVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGR 343

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   +K     +V V  +LI MYA+C  +  +  V  +   K +V WN++L+G V N 
Sbjct: 344 CLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNK 403

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A+  F+++   G + +     + + A G L +L     +++Y ++ GFVS++Q+  
Sbjct: 404 LATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVAT 463

Query: 301 TLMDMYAKCCCVNYMGRVFYQMT--AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           +L+D+Y+KC  +    ++F  +    QD   W+ IIAGY  +     A+ LF+ +   G+
Sbjct: 464 SLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGV 523

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYSR 416
             + +   SVL +CS    +     +  ++++  + + +      +VD+ G+ G +D + 
Sbjct: 524 KPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAY 583

Query: 417 NVFESIE 423
           ++ +++ 
Sbjct: 584 DLIKTMP 590



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 173/359 (48%), Gaps = 15/359 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A  +FD + +R V +W +M+  Y+ NG+    L  +  M++ G+  ++ T
Sbjct: 266 MYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVT 325

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ ACA L +L  G  +HG V+K    S   +  SL+ MYAKC     +  +F R  
Sbjct: 326 IALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTS 385

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K+  V WN+++S    +    EA+GLF++M   G+  NA T  + L A    +      
Sbjct: 386 RKK-TVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVN 444

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVSWNSMLTGFVQ 238
            I++  ++SG    + VA +LI +Y++CG +  A  +     ++ +D   W+ ++ G+  
Sbjct: 445 NINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGM 504

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK--QGFVSDL 296
           +     A+  F+++  +G KP+ V   + + +    G + +G  L  + +K  Q   +D 
Sbjct: 505 HGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPND- 563

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
                  D Y   C V+ +GR      A D I     + G+A     L A  +   V+L
Sbjct: 564 -------DHYT--CMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVEL 613


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/520 (40%), Positives = 325/520 (62%), Gaps = 2/520 (0%)

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           +VF +M  ++  +W  +++G  Q   +   L LFR +   G   D   +GSVL  C+GL+
Sbjct: 44  KVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLR 103

Query: 377 CMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
                K++H Y+++ G   +LV+ +++  +Y K G++     V +++  ++VV+W ++I+
Sbjct: 104 ASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIA 163

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
               NG     L+L+ +M  + +  D ITLVS +S+++ L+ L +G++++   I+ G N 
Sbjct: 164 GNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANS 223

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
             +V SSL+ MY++CG L+ + K     +  D +LW+SMI A G HGRG+ A+ LF +ME
Sbjct: 224 AVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQME 283

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
            E    + +TFL+LLYACSH+GL  +G  F ++M   Y L P  EHY C+VDLLGR+  L
Sbjct: 284 QEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCL 343

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           +EA   +RSM +E    +W  LL ACR+H N ++    A+++L L+P +   YVL+SN+ 
Sbjct: 344 DEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIH 403

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           A++++WKDV +VR  MR   +KK PG SW+E+ N++  F   DKSH  S+EI   L E+ 
Sbjct: 404 ASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELM 463

Query: 736 EKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVC 795
           E+++   GYV  T  V H+ + EEK   L  HSE+LAIA+G++    GS IR+ KNLR+C
Sbjct: 464 EEMKLR-GYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRIC 522

Query: 796 VDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            DCH   KL+S +  RE++VRD +RFHHF+ G CSCGDYW
Sbjct: 523 SDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 174/343 (50%), Gaps = 4/343 (1%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N L+  + +  D   A ++FD M E+ +V  WN+++S           L LFREM  +G 
Sbjct: 27  NILINGHVQHGDLDSAIKVFDEMLER-NVATWNAMVSGLIQFEFNENGLFLFREMHELGF 85

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           + + +T  + L+ C        G ++HA  +K G    + V ++L  MY + G + E   
Sbjct: 86  LPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEK 145

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V+  +  ++ V+WN+++ G  QN  +   +  +  ++ +G +PD++  V+ +S+S  L  
Sbjct: 146 VIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELAT 205

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G+++HA AIK G  S + + ++L+ MY+KC C+    +        D + W+++IA 
Sbjct: 206 LFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAA 265

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSD 395
           Y  +    +A+ LF  ++ EGL  + +   S+L ACS      +       ++ K GL  
Sbjct: 266 YGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKP 325

Query: 396 -LVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
            L     +VD+ G+ G +D +  +  S+    DVV W +++S+
Sbjct: 326 RLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA 368



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 160/333 (48%), Gaps = 3/333 (0%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G +  A ++FD++ +R V TWNAM+   +        L  +  M  LG   D FT   V+
Sbjct: 37  GDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVL 96

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           + CA L+    G ++H  VLK GY+    + +SL  MY K     +  ++   M    +V
Sbjct: 97  RGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAM-RIRNV 155

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           V WN++I+  + +G     L L+  M+  GL  +  T V+ + +  + +    G +IHA 
Sbjct: 156 VAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAE 215

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
            +K+G N  V V ++LI+MY++CG + ++   L   E+ DSV W+SM+  +  +    +A
Sbjct: 216 AIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEA 275

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI-KQGFVSDLQIGNTLMD 304
           +  F +++  G   + V  ++ + A    G    G       + K G    L+    ++D
Sbjct: 276 VHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVD 335

Query: 305 MYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG 336
           +  +  C++    +   M  + D + W T+++ 
Sbjct: 336 LLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA 368



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 122/238 (51%), Gaps = 5/238 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K GS+ + E++   +  R V  WN ++     NG    VL+ Y+ M++ G+  D  T
Sbjct: 133 MYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKIT 192

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA-RQLFDRM 119
              VI + A L  L  G +IH   +K G +S   +++SL++MY+KC     + + L D  
Sbjct: 193 LVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLD-- 250

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E  D VLW+S+I+AY   G+  EA+ LF +M++ GL  N  TF++ L AC  +  +  G
Sbjct: 251 CEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKG 310

Query: 180 MEIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
           M      V K G   ++     ++ +  R G + EA  ++  +    D V W ++L+ 
Sbjct: 311 MGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA 368



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 105/207 (50%)

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
           M + +E   +     + +++  N +++ + + G++D +  VF+ +  ++V +W +M+S  
Sbjct: 5   MGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGL 64

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           +        L LF  M+E     D  TL S L   + L     GK+++ ++++ G+    
Sbjct: 65  IQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNL 124

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            V SSL  MY + G+L    KV   ++ ++++ W ++I  N  +G  +  +DL+  M+  
Sbjct: 125 VVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMS 184

Query: 558 SFAPDHITFLALLYACSHSGLINEGKK 584
              PD IT ++++ + +    + +G++
Sbjct: 185 GLRPDKITLVSVISSSAELATLFQGQQ 211


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/642 (35%), Positives = 369/642 (57%), Gaps = 36/642 (5%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V+  NA+++ Y++ G + +   V  Q+   D+VS+N+++ GF  N    +A++FF  +Q 
Sbjct: 89  VFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQE 148

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G +      V+ + A  +L ++  GK++H   +       + + N L +MYAKC  ++ 
Sbjct: 149 EGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQ 208

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
              +F +M  ++ +SW ++I+GY QN       +LF  +Q  GL  D + I ++L A   
Sbjct: 209 ARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA--- 265

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
                                          Y +CG ID +   F  I+ KD V WT+M+
Sbjct: 266 -------------------------------YFQCGYIDEACKTFREIKEKDKVCWTTMM 294

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
                NG   +AL LF  M   NV  D+ T+ S +S+ + L+ L +G+ ++G  +  G +
Sbjct: 295 VGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVD 354

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
            +  V+S+LVDMY++CG    A  VF  + T+++I W SMI     +G+   A+ L+ +M
Sbjct: 355 HDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEM 414

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
             E+  PD+ITF+ +L AC H+GL+  G+ +   +   + ++P  +HY+C+++LLGRA +
Sbjct: 415 LHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGY 474

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNV 674
           +++A   ++SM  EP   +W  LL  CR++ +   GE+ A+ L ELDP N G Y+++SN+
Sbjct: 475 MDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNI 534

Query: 675 FAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
           +AA  +WKDV  VR  M+ + +KK    SWIEI N++H F+A D++HSE+++IY++L  +
Sbjct: 535 YAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRL 594

Query: 735 TEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG-SLIRITKNLR 793
            +KL+ E G+   T  VLH+V EEEK   +  HSE+LA+A+ ++K   G + IRI KN+R
Sbjct: 595 IKKLQ-ESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIR 653

Query: 794 VCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           VC DCH F K VS++  R +++RD NRFHHF  G CSC D W
Sbjct: 654 VCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 224/480 (46%), Gaps = 92/480 (19%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG--EPLR----------------- 41
           +Y K G++ DA  LFDK+S+R VF+WNAML AY  +G  E LR                 
Sbjct: 67  LYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTV 126

Query: 42  ------------VLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                        LE + RM+  G     +T   V+ AC+ L D+  G +IHG ++    
Sbjct: 127 IAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSL 186

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
             + F+ N+L  MYAKC    +AR LFDRM  K +VV WNS+IS Y  +GQ      LF 
Sbjct: 187 GESVFVWNALTNMYAKCGALDQARWLFDRMVNK-NVVSWNSMISGYLQNGQPETCTKLFC 245

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EMQ  GL+ +                                  QV ++N L A Y +CG
Sbjct: 246 EMQSSGLMPD----------------------------------QVTISNILSA-YFQCG 270

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + EA     +++ KD V W +M+ G  QN     A+  FRE+     +PD     + VS
Sbjct: 271 YIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVS 330

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           +  RL +L  G+ +H  A+  G   DL + + L+DMY+KC        VF +M  ++ IS
Sbjct: 331 SCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVIS 390

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W ++I GYAQN   L+AL L+  +  E L  D +    VL AC           +H  ++
Sbjct: 391 WNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSAC-----------MHAGLV 439

Query: 390 RKG------LSDLVILNAIVDVY-------GKCGNIDYSRNVFESIE-SKDVVSWTSMIS 435
            +G      +S +  +N   D Y       G+ G +D + ++ +S+    + + W++++S
Sbjct: 440 ERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 175/391 (44%), Gaps = 67/391 (17%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A  LFD++  + V +WN+M+  Y+ NG+P    + +  M+  G+  D  T
Sbjct: 199 MYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVT 258

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A                  +CGY            +   C  FR+ ++      
Sbjct: 259 ISNILSA----------------YFQCGY------------IDEACKTFREIKE------ 284

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             +D V W +++   + +G+  +AL LFREM    +  + +T  + + +C   +    G 
Sbjct: 285 --KDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQ 342

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   V  G +  + V++AL+ MY++CG+  +A  V  ++  ++ +SWNSM+ G+ QN 
Sbjct: 343 AVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNG 402

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF---VSDLQ 297
              +A+  + E+     KPD +  V  +SA    G +  G         QG+   +S + 
Sbjct: 403 KDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERG---------QGYFYSISKIH 453

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIA----GYAQNNCH 343
             N   D Y+  C +N +GR  Y   A D I           W+T+++        NN  
Sbjct: 454 GMNPTFDHYS--CMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGE 511

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSG 374
           + A  LF   +L+  +A   I+ S + A  G
Sbjct: 512 MAARHLF---ELDPHNAGPYIMLSNIYAACG 539


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/562 (37%), Positives = 351/562 (62%), Gaps = 4/562 (0%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ--DFISWTTII 334
           LL GK +H+  +K G+ SD  I N L++MY KC  +     VF Q+  +  D ISW  II
Sbjct: 40  LLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGII 99

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL- 393
             Y QN    +AL LF+T+ LEG+ A+ + + + + AC+ L    + + +H   + K L 
Sbjct: 100 GAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLE 159

Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
           SD ++  ++V+++GKC N+D +R VF+S+  K++V+W +M++ Y  N    +A+++F  M
Sbjct: 160 SDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFM 219

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
           +   V+ D++T ++ + A ++L+   +G+ ++  I   G  ++ ++ ++++  Y +CG L
Sbjct: 220 DLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRL 279

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
           D A  +F+ +  K+ + W++++ A   +G    AI+L+++M       + ITFL LL+AC
Sbjct: 280 DNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFAC 339

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           SH+G   +G  +   M  D+ + P  EHY  L+DLLGR+  L+ +   + SM  EP +  
Sbjct: 340 SHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSA 399

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
           W ALLGACR+H + + G  +A+ + ELDP + G Y+L+SN+++++ +  +  + R  MR 
Sbjct: 400 WLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRL 459

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            G+ K PG S IE+ +++H F+A  K H +   I+ ++  +  ++ +E GYVA  + VL 
Sbjct: 460 RGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARV-KEAGYVADVRAVLR 518

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +VEEEEK Q+L+ HSERLAIA+G++ +  G+ + I KNLRVC DCH+  K +S++ GR++
Sbjct: 519 DVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVGRKI 578

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           VVRDA RFHHFE G CSCGDYW
Sbjct: 579 VVRDAIRFHHFENGACSCGDYW 600



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 206/420 (49%), Gaps = 7/420 (1%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+  ++K CA  K L  G ++H  ++K GY S   I N L+ MY KC    +AR +FD++
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 120 GEKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
            EK  DV+ WN II AY+ +G   EAL LF+ M   G++ N  T + A+ AC     E  
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  +HA  V         V  +L+ M+ +C  +  A  V   L  K+ V+WN+M+  + Q
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N    KA+Q FR +   G +PD V  +  + A   L     G+ +H      G   D+ +
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVAL 265

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G  +M  Y KC  ++    +F  +  ++ ++W+ I+A YAQN    +A+EL+  +   GL
Sbjct: 266 GTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGL 325

Query: 359 DADVMIIGSVLMACS-GLKCMSQTKEIHGYIIRKGLSDLV--ILNAIVDVYGKCGNIDYS 415
           + + +    +L ACS   + M         I   G+  +    LN ++D+ G+ G +  S
Sbjct: 326 EVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLN-LIDLLGRSGQLQLS 384

Query: 416 RNVFESIE-SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE-SDSITLVSALSAAS 473
            ++  S+    D  +W +++ +   +G  +    +  L+ E + E S    L+S L +++
Sbjct: 385 EDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSST 444



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 159/311 (51%), Gaps = 4/311 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRT--VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MYGKCG + +A  +FD++ ++   V +WN ++GAY  NG     L  +  M + G+  + 
Sbjct: 68  MYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQ 127

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            T    I ACA L   + G  +H + +    +S   +  SLV M+ KC +   AR +FD 
Sbjct: 128 VTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDS 187

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           +  K ++V WN++++ YS + QC +A+ +FR M   G+  +A TF+  + AC   +  T 
Sbjct: 188 LPRK-NLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTE 246

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  +H     SG  + V +  A++  Y +CG++  A  +   L  K++V+W+++L  + Q
Sbjct: 247 GRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQ 306

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQ 297
           N    +A++ + E+   G + + +  +  + A    G  ++G +     I+  G V   +
Sbjct: 307 NGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFE 366

Query: 298 IGNTLMDMYAK 308
               L+D+  +
Sbjct: 367 HYLNLIDLLGR 377



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 155/329 (47%), Gaps = 9/329 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M+GKC +V  A  +FD + ++ + TWN M+  Y  N +  + ++ +  M + G+  DA T
Sbjct: 171 MFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVT 230

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +I ACA L     G  +H  +   G      +  +++  Y KC     AR +FD +G
Sbjct: 231 FLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLG 290

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K++ V W++I++AY+ +G   EA+ L+ EM + GL  N  TF+  L AC  +     G+
Sbjct: 291 -KKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGV 349

Query: 181 EIHAATVKSGQNLQVYVAN-ALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQ 238
           +   + ++    + V+     LI +  R G++  +  ++  +    DS +W ++L     
Sbjct: 350 DYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRM 409

Query: 239 N---DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAI-KQGFV 293
           +   D   +  +   EL      P  +   N  S++GR+       K +    I KQ  +
Sbjct: 410 HGDVDRGARIAELIYELDPEDSGP-YILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGL 468

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
           S +++ + + +  A       +GR+  ++
Sbjct: 469 SSIEVKDRVHEFMAAQKLHPQLGRIHAEI 497



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 3/164 (1%)

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T V  L   +    L +GK ++  +++ G+  +  +A+ L++MY +CG +  A  VF+ +
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 524 QTK--DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
           Q K  D+I W  +I A   +G GK A+ LF  M+ E    + +T +  + AC+      E
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           G + +  +  D +L+        LV++ G+  +++ A     S+
Sbjct: 146 G-RIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSL 188


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 248/790 (31%), Positives = 418/790 (52%), Gaps = 32/790 (4%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y     ++ A   F+ +  R V +WN+ML  ++  GE L  ++ +  M   G+  D  +F
Sbjct: 125 YAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSF 184

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++K C++L++   G +IHG+ L+ GYD+     ++L+ MYAKC    ++  +F  M +
Sbjct: 185 SVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQ 244

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K + + W++II+    +      L +F+EMQ+VG+  +   + + L++C       LG +
Sbjct: 245 K-NWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQ 303

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +HA  +KS       V  A + MYA+C  M +A  +    EN +  S+N+M+TG+ Q D 
Sbjct: 304 LHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDN 363

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  FR+L  +    D++    A+ A   +  L  G +LH  A K  F  ++ + N 
Sbjct: 364 GFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANA 423

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
            +DMY KC  ++   RVF +M  +D +SW  IIA + QN    K L +  ++   G++ D
Sbjct: 424 FIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPD 483

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF- 419
               GSVL AC+G   ++   EIH  I++ G+ S+  I +++VD+Y KCG ID +  +  
Sbjct: 484 EYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHN 542

Query: 420 ----------------ESIESKD----------VVSWTSMISSYVHNGLANEALELFYLM 453
                           E+IE             +VSW ++IS YV    + +A   F  M
Sbjct: 543 KIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRM 602

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
            E  +  D  T  + L   ++L+ +  GK+++  +I+K    +  + S+LVDMY++CG L
Sbjct: 603 MEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNL 662

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
             +  +F     +D + W +MI     HG G+ AI LF  M   +  P+H TF++LL AC
Sbjct: 663 HDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRAC 722

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           +H GL+  G  +  +M+ +Y LDP  EHY+ +VD+LG++  +E+A + ++ M  E    +
Sbjct: 723 AHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVI 782

Query: 634 WCALLGACRVH-SNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           W  LL AC+++ +N E  E+ A  LL LDP +   Y+L+SN++A +  W    ++R  MR
Sbjct: 783 WRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMR 842

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLERE-GGYVAQTQFV 751
              LKK PG SW+EI ++ H+F+  DK+H    EIY  LA I  ++    GG + +    
Sbjct: 843 SDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYNGLALIYNEMNLSVGGTMVEISGF 902

Query: 752 LHNVEEEEKV 761
            + V E+++ 
Sbjct: 903 YNEVFEQDQT 912



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 162/570 (28%), Positives = 293/570 (51%), Gaps = 38/570 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  + ++  +F  + Q+   +W+A++   V N      L+ +  M+ +G+ V    
Sbjct: 225 MYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSI 284

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+K+CA L DL  G ++H   LK  +     +  + + MYAKC + + A++LFD M 
Sbjct: 285 YASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFD-MS 343

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  ++  +N++I+ YS       AL LFR++ +  L  +  +   AL+AC      + G+
Sbjct: 344 ENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGL 403

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H    KS  +  + VANA I MY +C  + EA  V  ++  KD+VSWN+++    QN+
Sbjct: 404 QLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNE 463

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIG 299
              K +     +  +G +PD+    + + A    G+ LN G E+H   +K G  S+  IG
Sbjct: 464 ERSKTLNILVSMLRSGMEPDEYTFGSVLKACA--GDSLNHGMEIHTTIVKLGMASNPYIG 521

Query: 300 NTLMDMYAKCCCVNYMGRVFYQM---------------------TAQD------FISWTT 332
           ++L+DMY+KC  ++   ++  ++                       QD       +SW  
Sbjct: 522 SSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNA 581

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           II+GY        A   F  +   G+  D     +VL  C+ L  +   K+IH ++I+K 
Sbjct: 582 IISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKE 641

Query: 393 LS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
           L  D+ I + +VD+Y KCGN+  SR +FE    +D V+W +MI  Y H+G+  EA++LF 
Sbjct: 642 LQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFE 701

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGF-IIRKGFNLEGSVA--SSLVDMYA 508
            M   N+  +  T VS L A + + ++++G  L+ F +++K + L+  +   S++VD+  
Sbjct: 702 SMVLMNIMPNHATFVSLLRACAHMGLVERG--LDYFHMMKKEYGLDPRLEHYSNMVDILG 759

Query: 509 RCGALDIANKVFNCVQTK-DLILWTSMINA 537
           + G ++ A ++   +  + D ++W ++++A
Sbjct: 760 KSGEVEKALELIQEMPFEADDVIWRTLLSA 789



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 243/493 (49%), Gaps = 34/493 (6%)

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
           T+   F    + C       LG + HA  + SG    V+V+N L+ +Y  CG +  A  +
Sbjct: 47  TSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKL 106

Query: 218 LYQLENKDSVSWN-------------------------------SMLTGFVQNDLYCKAM 246
              +  +D VSWN                               SML+GF+Q     +++
Sbjct: 107 FDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESV 166

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
           + F E+  +G + D       +     L N   G ++H  A++ G+ +D+  G+ L+DMY
Sbjct: 167 KVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMY 226

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
           AKC  ++    VFY M  +++ISW+ IIAG  QNN     L++F+ +Q  G+     I  
Sbjct: 227 AKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYA 286

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           SVL +C+ L  +    ++H + ++   + D ++  A +D+Y KC N+  ++ +F+  E+ 
Sbjct: 287 SVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENL 346

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           ++ S+ +MI+ Y        AL LF  ++++++  D I+L  AL A +++  L +G +L+
Sbjct: 347 NLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLH 406

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
           G   +  F+    VA++ +DMY +C ALD A +VF+ +  KD + W ++I A+  +    
Sbjct: 407 GLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERS 466

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
             +++   M      PD  TF ++L AC+   L +  +    I++     +P+    + L
Sbjct: 467 KTLNILVSMLRSGMEPDEYTFGSVLKACAGDSLNHGMEIHTTIVKLGMASNPYIG--SSL 524

Query: 606 VDLLGRANHLEEA 618
           VD+  +   ++EA
Sbjct: 525 VDMYSKCGMIDEA 537



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 232/529 (43%), Gaps = 64/529 (12%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GK+ HA+ I  GF   + + N L+ +Y  C  + Y  ++F  M  +D +SW  +I GYA 
Sbjct: 68  GKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAA 127

Query: 340 NN-------C------------------------HLKALELFRTVQLEGLDADVMIIGSV 368
           +N       C                        +L+++++F  +   G++ D      +
Sbjct: 128 SNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVI 187

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           L  CS L+      +IHG  +R G  +D+V  +A++D+Y KC  +D S  VF ++  K+ 
Sbjct: 188 LKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNW 247

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           +SW+++I+  V N   +  L++F  M +  V        S L + ++L  L+ G +L+  
Sbjct: 248 ISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAH 307

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
            ++  F  +G V ++ +DMYA+C  +  A ++F+  +  +L  + +MI        G  A
Sbjct: 308 ALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRA 367

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLV 606
           + LF K+   S   D I+    L AC+    ++EG +   +  + ++  +    +    +
Sbjct: 368 LLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVAN--AFI 425

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG-NP 665
           D+ G+   L+EA +    M     A  W A++ A     N+E  + +   +  L  G  P
Sbjct: 426 DMYGKCEALDEACRVFDEMG-RKDAVSWNAIIAAHE--QNEERSKTLNILVSMLRSGMEP 482

Query: 666 GNYVLISNVFA-ASRKWKDVEQVRMRMRGSGLKKTP--GSSWIE-------------IGN 709
             Y   S + A A        ++   +   G+   P  GSS ++             I N
Sbjct: 483 DEYTFGSVLKACAGDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHN 542

Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLERE---------GGYVAQTQ 749
           KI   I    ++SE  E  ++   I ++  +E          GYV + Q
Sbjct: 543 KIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQ 591


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 212/559 (37%), Positives = 340/559 (60%), Gaps = 4/559 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +HA+ IK  ++  + +   L+  Y KC  +     VF  M  ++ +SWT +I+ Y+Q
Sbjct: 77  GQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQ 136

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL 399
                +AL LF  +   G + +     +VL +C G       ++IH +II+      V +
Sbjct: 137 RGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYV 196

Query: 400 -NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            ++++D+Y K G I  +R +F+ +  +DVVS T++IS Y   GL  EALELF  +    +
Sbjct: 197 GSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGM 256

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
           +S+ +T  S L+A S L+ L  GK+++  ++R        + +SL+DMY++CG L  A +
Sbjct: 257 QSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARR 316

Query: 519 VFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSG 577
           +F+ +  + +I W +M+     HG G+  ++LF  M  E+   PD +T LA+L  CSH G
Sbjct: 317 IFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGG 376

Query: 578 LINEGKK-FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           L ++G   F ++      + P  +HY C+VD+LGRA  +E A++FV+ M  EP+A +W  
Sbjct: 377 LEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGC 436

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LLGAC VHSN ++GE V  +LL+++P N GNYV++SN++A++ +W+DV  +R  M    +
Sbjct: 437 LLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAV 496

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
            K PG SWIE+   +H+F A D SH   +E+  K+ E++ +  +E GYV     VLH+V+
Sbjct: 497 TKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARF-KEAGYVPDLSCVLHDVD 555

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EE+K ++L  HSE+LA+ +G++ + E   IR+ KNLR+CVDCH+F K  S+++GRE+ +R
Sbjct: 556 EEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLR 615

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D NRFH    G CSCGDYW
Sbjct: 616 DKNRFHRIVGGKCSCGDYW 634



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 190/364 (52%), Gaps = 10/364 (2%)

Query: 19  SQRTVFTWNAMLGAYVSNGEPL--------RVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           + + +F    +L  + SN   +        R+ E    M + G+  +   +  V+  C  
Sbjct: 11  THKAIFQKPRLLSTFPSNSHHVLNIHIHDTRLREALLHMALRGLDTNFQDYNTVLNECLR 70

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
            + +  G ++H  ++K  Y    ++   L+  Y KC   R AR +FD M E+ +VV W +
Sbjct: 71  KRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPER-NVVSWTA 129

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +ISAYS  G   +AL LF +M R G   N +TF   L +C  SS   LG +IH+  +K  
Sbjct: 130 MISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLN 189

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               VYV ++L+ MYA+ GK+ EA G+   L  +D VS  ++++G+ Q  L  +A++ FR
Sbjct: 190 YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFR 249

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
            LQ  G + + V   + ++A   L  L +GK++H + ++    S + + N+L+DMY+KC 
Sbjct: 250 RLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCG 309

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVL 369
            + Y  R+F  +  +  ISW  ++ GY+++    + LELF  +  E  +  D + + +VL
Sbjct: 310 NLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVL 369

Query: 370 MACS 373
             CS
Sbjct: 370 SGCS 373



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 181/386 (46%), Gaps = 20/386 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            Y KC S+ DA  +FD + +R V +W AM+ AY   G   + L  + +M   G   + FT
Sbjct: 102 FYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFT 161

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ +C        G +IH  ++K  Y++  ++ +SL+ MYAK     +AR +F  + 
Sbjct: 162 FATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP 221

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ DVV   +IIS Y+  G   EAL LFR +QR G+ +N  T+ + L A    +    G 
Sbjct: 222 ER-DVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGK 280

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   ++S     V + N+LI MY++CG +T A  +   L  +  +SWN+ML G+ ++ 
Sbjct: 281 QVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHG 340

Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              + ++ F  +    + KPD V  +  +S     G    G ++  Y +  G +S     
Sbjct: 341 EGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDI-FYDMTSGKIS----- 394

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL---------- 349
               D     C V+ +GR      A +F+         A   C L A  +          
Sbjct: 395 -VQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFV 453

Query: 350 -FRTVQLEGLDADVMIIGSVLMACSG 374
             + +Q+E  +A   +I S L A +G
Sbjct: 454 GHQLLQIEPENAGNYVILSNLYASAG 479



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 92/201 (45%), Gaps = 6/201 (2%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           +++G+ ++  +I+  +     + + L+  Y +C +L  A  VF+ +  ++++ WT+MI+A
Sbjct: 74  IREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISA 133

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC-SHSGLINEGKKFLEIMRCDYQLD 596
               G    A+ LF +M      P+  TF  +L +C   SG +   +    I++ +Y+  
Sbjct: 134 YSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAH 193

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
            +    + L+D+  +   + EA    + +           + G  ++  ++E  E+  + 
Sbjct: 194 VYVG--SSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRL 251

Query: 657 LLELDPGNPGNYVLISNVFAA 677
             E   G   NYV  ++V  A
Sbjct: 252 QRE---GMQSNYVTYTSVLTA 269


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/647 (37%), Positives = 373/647 (57%), Gaps = 16/647 (2%)

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
           NL +Y    +IA Y R  ++ +A  +  ++  +D VSWNSM+ G +       A + F E
Sbjct: 42  NLHLYTK--MIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDE 99

Query: 252 LQGAGQKPDQVCTVNAVSASGRL-GNLLNGK-ELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           +      P++    N +S +  + G L  G+ EL         V D+   N ++  Y + 
Sbjct: 100 M------PEK----NVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFEN 149

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             V    R+F +M  +D ISWT++I G   N    +AL +F+ +   G++        VL
Sbjct: 150 GRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVL 209

Query: 370 MACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            AC+     +   ++HG++++ G      I  +++  Y  C  I+++  +F    +K+VV
Sbjct: 210 SACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVV 269

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
            WT+++++YV N    +AL +F  M +     +  T    L A   L  L KGKE++   
Sbjct: 270 KWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMA 329

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           I+ G   +  V +SLV MY  CG ++ A  VF  +  KD++ W S+I  +  HG G  A+
Sbjct: 330 IKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWAL 389

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
             F +M      P+ ITF  LL ACS SG++ +G+ F E +         P+HYAC+VD+
Sbjct: 390 IFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDI 449

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
           LGR   L+EA + VR M ++  + +W ALL ACRVHSN E+ E  AK +L+L+P     Y
Sbjct: 450 LGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAY 509

Query: 669 VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
           VL+SN++A++ +W DV ++R++M+  GL K PGSSW+ +  K H F++ D+SH  S+ IY
Sbjct: 510 VLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIY 569

Query: 729 KKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRI 788
           +KL  + +KL +E GYV   +F LH+VE+E+K +ML  HSERLAIA+G++ + EGS I +
Sbjct: 570 EKLDWLGKKL-KEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITV 628

Query: 789 TKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            KNLRVC DCHS  KL+S++ GR++VVRD+ RFHHF+ G+CSC DYW
Sbjct: 629 MKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 215/447 (48%), Gaps = 17/447 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y +   + DA +LFD++S R V +WN+M+   +  G     L   +R+       D    
Sbjct: 53  YTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGN----LGMATRL------FDEMPE 102

Query: 62  PCVIKACAMLKD-LDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRM 119
             VI    M+   L  G       L       D    N++V  Y +     +  +LF+ M
Sbjct: 103 KNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEM 162

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + DV+ W S+I     +G+  EAL +F++M R G+     TF   L AC ++    LG
Sbjct: 163 PVR-DVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLG 221

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           +++H   VK G     +++ +LI  YA C K+  A  +  +   K+ V W ++LT +V N
Sbjct: 222 VQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWN 281

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           + +  A++ F ++   G  P+Q      + A   L  L  GKE+H  AIK G  +D+ +G
Sbjct: 282 NKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVG 341

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+ MY +C  VN    VF  +  +D +SW +II G AQ+   L AL  F  +   G+D
Sbjct: 342 NSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVD 401

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN--AIVDVYGKCGNIDYSRN 417
            + +    +L ACS    + + +    YI R   + L   +   +VD+ G+CG +D +  
Sbjct: 402 PNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEE 461

Query: 418 VFESIESK-DVVSWTSMISS-YVHNGL 442
           +   +  K + + W +++S+  VH+ L
Sbjct: 462 LVRYMPVKANSMIWLALLSACRVHSNL 488



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 45/230 (19%)

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           +D +R +F+ I S ++  +T MI+ Y  N    +AL+LF  M+  +V S           
Sbjct: 28  LDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVS----------- 76

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
                                        +S++     CG L +A ++F+ +  K++I W
Sbjct: 77  ----------------------------WNSMIKGCLDCGNLGMATRLFDEMPEKNVISW 108

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
           T+M+N     GR ++A  LF  M  +  A     + A+++    +G + EG +  E M  
Sbjct: 109 TTMVNGYLKFGRVELAQRLFLDMHVKDVA----AWNAMVHGYFENGRVEEGVRLFEEMPV 164

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
              +  W      L DL G++      ++ +    +EPT   +  +L AC
Sbjct: 165 R-DVISWTSMIGGL-DLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSAC 212



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 69/141 (48%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG+V  A  +F  ++++ + +WN+++     +G  L  L  +++M   G+  +  T
Sbjct: 347 MYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEIT 406

Query: 61  FPCVIKACA---MLKDLDCG----AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           F  ++ AC+   ML    C     ++    VL+  + +       +V +  +C    +A 
Sbjct: 407 FTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYAC------MVDILGRCGKLDEAE 460

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
           +L   M  K + ++W +++SA
Sbjct: 461 ELVRYMPVKANSMIWLALLSA 481


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/637 (35%), Positives = 368/637 (57%), Gaps = 8/637 (1%)

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           MY++      A  VL     ++ VSW S+++G  QN  +  A+  F E++  G  P+   
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
              A  A   L   + GK++HA A+K G + D+ +G +  DMY K    +   ++F ++ 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD--ADVMIIGSVLMACSGLKCMSQT 381
            ++  +W   I+    +    +A+E F  ++   +D   + +   + L ACS    ++  
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAF--IEFRRIDGHPNSITFCAFLNACSDWLHLNLG 178

Query: 382 KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN 440
            ++HG ++R G  +D+ + N ++D YGKC  I  S  +F  + +K+ VSW S++++YV N
Sbjct: 179 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 238

Query: 441 GLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA 500
               +A  L+    +  VE+    + S LSA + ++ L+ G+ ++   ++        V 
Sbjct: 239 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 298

Query: 501 SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-- 558
           S+LVDMY +CG ++ + + F+ +  K+L+   S+I      G+  +A+ LF +M      
Sbjct: 299 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 358

Query: 559 FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
             P+++TF++LL ACS +G +  G K  + MR  Y ++P  EHY+C+VD+LGRA  +E A
Sbjct: 359 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 418

Query: 619 YQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS 678
           Y+F++ M I+PT  VW AL  ACR+H   +LG + A+ L +LDP + GN+VL+SN FAA+
Sbjct: 419 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 478

Query: 679 RKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKL 738
            +W +   VR  ++G G+KK  G SWI + N++H+F A+D+SH  + EI   LA++  ++
Sbjct: 479 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 538

Query: 739 EREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDC 798
           E   GY    +  L+++EEEEK   +  HSE+LA+A+G+L       IRITKNLR+C DC
Sbjct: 539 E-AAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDC 597

Query: 799 HSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           HSF K VS    RE++VRD NRFH F+ G+CSC DYW
Sbjct: 598 HSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 237/465 (50%), Gaps = 11/465 (2%)

Query: 102 MYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAY 161
           MY+K  D  ++ +L  R+    +VV W S+IS  + +G    AL  F EM+R G+V N +
Sbjct: 1   MYSK-LDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDF 59

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           TF  A +A         G +IHA  VK G+ L V+V  +   MY +     +A  +  ++
Sbjct: 60  TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             ++  +WN+ ++  V +    +A++ F E +     P+ +     ++A     +L  G 
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           +LH   ++ GF +D+ + N L+D Y KC  +     +F +M  ++ +SW +++A Y QN+
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-N 400
              KA  L+   + + ++    +I SVL AC+G+  +   + IH + ++  +   + + +
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE--ANV 458
           A+VD+YGKCG I+ S   F+ +  K++V+  S+I  Y H G  + AL LF  M       
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA 516
             + +T VS LSA S    ++ G ++    +R  + +E      S +VDM  R G ++ A
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 418

Query: 517 NKVFNCVQTKDLI-LWTSMINANGLHGR---GKVAIDLFYKMEAE 557
            +    +  +  I +W ++ NA  +HG+   G +A +  +K++ +
Sbjct: 419 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPK 463



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 237/508 (46%), Gaps = 25/508 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K      A  +      R V +W +++     NG     L  +  MR  G+  + FT
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPC  KA A L+    G +IH L +KCG     F+  S   MY K      AR+LFD + 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ ++  WN+ IS     G+  EA+  F E +R+    N+ TF A L AC D     LGM
Sbjct: 121 ER-NLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   ++SG +  V V N LI  Y +C ++  +  +  ++  K++VSW S++  +VQN 
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239

Query: 241 LYCKA-MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              KA + + R  +   +  D + + + +SA   +  L  G+ +HA+A+K      + +G
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMIS-SVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 298

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE--G 357
           + L+DMY KC C+    + F +M  ++ ++  ++I GYA       AL LF  +     G
Sbjct: 299 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 358

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
              + M   S+L ACS       G+K     +  +G  I  G       + IVD+ G+ G
Sbjct: 359 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG--IEPGAEH---YSCIVDMLGRAG 413

Query: 411 NIDYSRNVFESIESKDVVS-WTSMISSYVHNGLANEAL----ELFYLMNEANVESDSITL 465
            ++ +    + +  +  +S W ++ ++   +G     L     LF L  +     + + L
Sbjct: 414 MVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKL--DPKDSGNHVLL 471

Query: 466 VSALSAASSLSILKKGK-ELNGFIIRKG 492
            +  +AA   +     + EL G  I+KG
Sbjct: 472 SNTFAAAGRWAEANTVREELKGVGIKKG 499


>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
 gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
          Length = 601

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/607 (37%), Positives = 356/607 (58%), Gaps = 10/607 (1%)

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN--LLNGKELHAYAIKQ 290
           +  + +NDL+ KA+Q F++      + +Q   V  + +   LG+  L +GKE+H +AI Q
Sbjct: 1   MGAYQENDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQ 60

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           GF +DL + N+L+ MYAKC    +   VF +M  ++ IS+T++I  Y     H++A EL+
Sbjct: 61  GFGTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYELY 120

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
           + +  EG+  D+    + L  C  ++   + + IH  +        V  NA+V +YG+ G
Sbjct: 121 KKMLSEGIMPDIYAYAAALAVCPTIR---EGEAIHVKLGNHERRTPVCSNALVGMYGRFG 177

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            I  ++ VF+ I  KD+ S+ +MI+ +      ++A+ L+  M   N+E +  T  S L 
Sbjct: 178 RIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLD 237

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDL 528
           A S L  L +GKE++  +  KG +    VA  ++LV+MYA+CG+   A  VFN    K++
Sbjct: 238 ACSKLGALTEGKEIHKKV--KGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKNV 295

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
             WTS+++A    G+ +  ++ + +M  E   PD +TF A+  ACSHSGL +EG  +   
Sbjct: 296 FTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRA 355

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           MR D+ + P   HY C++DLLGR   L EA + VR+M   P    W  LL AC+V+ + +
Sbjct: 356 MREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLK 415

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
           +G    K++ EL+P + G Y+L+ N++A + KW DV +V+  ++  GL K PG S IE  
Sbjct: 416 IGARAYKRITELNPPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQ 475

Query: 709 NKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHS 768
            +IH F+  D +H  + EI  +L E+ E+L    GY   T+ VL +V EE K ++L  HS
Sbjct: 476 RRIHEFVCGDTAHPLNQEIRARLQEVHEQLS-HAGYEPDTKEVLVDVNEEVKPELLLFHS 534

Query: 769 ERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGV 828
           ER+A+  G+L S  G+ + I KNLR+C DCHSF KLVS++  R+++VRD++RFH F+ G 
Sbjct: 535 ERMALGLGLLTSDAGATLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGS 594

Query: 829 CSCGDYW 835
           CSCGDYW
Sbjct: 595 CSCGDYW 601



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 209/427 (48%), Gaps = 40/427 (9%)

Query: 30  LGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD--LDCGAKIHGLVLKC 87
           +GAY  N    + L+ + +     +  +  T+  V+K+CA L D  L+ G +IH   +  
Sbjct: 1   MGAYQENDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQ 60

Query: 88  GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGL 147
           G+ +   + NSL+ MYAKC  F+ A  +FD+M E ++++ + S+I AY+ + + +EA  L
Sbjct: 61  GFGTDLVVQNSLIHMYAKCGSFKFAAGVFDKM-EPKNLISYTSMIQAYTHTAKHVEAYEL 119

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV---------- 197
           +++M   G++ + Y + AAL  C               T++ G+ + V +          
Sbjct: 120 YKKMLSEGIMPDIYAYAAALAVC--------------PTIREGEAIHVKLGNHERRTPVC 165

Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
           +NAL+ MY R G++  A  V   +  KD  S+N+M+  F + D   KA+  + E++G   
Sbjct: 166 SNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNL 225

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +P+     + + A  +LG L  GKE+H         +D+     L++MYAKC   +    
Sbjct: 226 EPNLWTYTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSAHEARA 285

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS---- 373
           VF     ++  +WT++++ Y+Q       LE ++ +  EG+  D +   ++  ACS    
Sbjct: 286 VFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGL 345

Query: 374 ---GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVS 429
              GL      +E H  +  +          ++D+ G+ G +  +  +  ++  S DVV+
Sbjct: 346 PDEGLLYFRAMREDHWIVPLQPH-----YTCMIDLLGRVGRLREAEELVRTMPYSPDVVT 400

Query: 430 WTSMISS 436
           WT ++S+
Sbjct: 401 WTILLSA 407



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 211/450 (46%), Gaps = 24/450 (5%)

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL--GMEIHAATVKS 189
           + AY  +    +AL LF++     L  N  T+V  L++C     + L  G EIH   +  
Sbjct: 1   MGAYQENDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQ 60

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G    + V N+LI MYA+CG    AAGV  ++E K+ +S+ SM+  +     + +A + +
Sbjct: 61  GFGTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYELY 120

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
           +++   G  PD      A++       +  G+ +H         + +   N L+ MY + 
Sbjct: 121 KKMLSEGIMPDIYAYAAALAVC---PTIREGEAIHVKLGNHERRTPV-CSNALVGMYGRF 176

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             +     VF  +  +D  S+  +IA +A+ +   KA+ L+  ++   L+ ++    SVL
Sbjct: 177 GRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVL 236

Query: 370 MACSGLKCMSQTKEIHGYIIRKG---LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
            ACS L  +++ KEIH  +  KG    +D+    A+V++Y KCG+   +R VF     K+
Sbjct: 237 DACSKLGALTEGKEIHKKV--KGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKN 294

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
           V +WTS++S+Y   G +   LE +  MN   V  D +T  +  +A S       G    G
Sbjct: 295 VFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSH-----SGLPDEG 349

Query: 487 FIIRKGFNLEGSVA------SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANG 539
            +  +    +  +       + ++D+  R G L  A ++   +  + D++ WT +++A  
Sbjct: 350 LLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACK 409

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           ++G  K+     YK   E   PD   +L +
Sbjct: 410 VYGDLKIGARA-YKRITELNPPDSGPYLLM 438



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 180/409 (44%), Gaps = 34/409 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS   A  +FDK+  + + ++ +M+ AY    + +   E Y +M   GI  D + 
Sbjct: 75  MYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYA 134

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +   +  C  +++   G  IH + L      T    N+LV MY +      A+ +FD + 
Sbjct: 135 YAAALAVCPTIRE---GEAIH-VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIR 190

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+  +N++I+ ++      +A+ L+ EM+   L  N +T+ + L AC      T G 
Sbjct: 191 YK-DLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLDACSKLGALTEGK 249

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           EIH       Q   V    AL+ MYA+CG   EA  V      K+  +W S+++ + Q  
Sbjct: 250 EIHKKVKGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKNVFTWTSLMSAYSQPG 309

Query: 241 LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQG-FVSDL 296
                ++ ++ +   G  PD V      NA S SG    L +   L+  A+++  ++  L
Sbjct: 310 QSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSG----LPDEGLLYFRAMREDHWIVPL 365

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQ----------DFISWTTIIAG-YAQNNCHLK 345
           Q   T        C ++ +GRV     A+          D ++WT +++      +  + 
Sbjct: 366 QPHYT--------CMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIG 417

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
           A    R  +L   D+   ++   + A +G    +   E+   I ++GL+
Sbjct: 418 ARAYKRITELNPPDSGPYLLMGNMYAKAGK--WADVAEVKKMIKQRGLA 464


>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/609 (37%), Positives = 346/609 (56%), Gaps = 42/609 (6%)

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           D+  ++ A  ++ R        ELHA  +++G  SD  +   L   YA    +++   + 
Sbjct: 25  DRAASLLAACSTAR-----RASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLL 79

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
            +      I +T+ I  ++    HL  L L   +  EGL      + + L AC GL   S
Sbjct: 80  GRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGL---S 136

Query: 380 QTKEIHGYIIRKGLS--------------------------------DLVILNAIVDVYG 407
             + +H Y  +  LS                                 +V + A++  Y 
Sbjct: 137 LGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYA 196

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
             G +D +R +F+ +  KD + W +MI  Y  +G  NEAL+LF  M  ++ E D +T+V 
Sbjct: 197 NMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVL 256

Query: 468 ALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
            LSA + L  ++ GK L+ ++   +   L   VA++LVDMY +CG+L+ A  VF+ +  K
Sbjct: 257 VLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNK 316

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           D+++W +MIN   +HG  + A+++F ++  +   P  ITF+ LL ACSHSGL+ EG+ F 
Sbjct: 317 DIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFF 376

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
           + M  +Y +DP  EHY C+VDLLGRA  +EEA+  V+S+ I P A +W +LL ACR+H N
Sbjct: 377 QSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKN 436

Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
             LG+ +A  L+     N G Y+L+SN++AA  KW++V +VR  M+ SG++K PG S IE
Sbjct: 437 MALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIE 496

Query: 707 IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
           I  K++ F+A D SH  +DEIY  L ++   L +E G+V QT+ VLH+++E  K + L  
Sbjct: 497 IDRKVYEFVAGDMSHPCTDEIYAMLDKMN-ALVKEHGHVPQTELVLHDLDEATKEKALAV 555

Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
           HSE+LA+A+G++ S  GS I+I KNLR C DCH+  KL+S++  R++V RD NRFHHF  
Sbjct: 556 HSEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDRNRFHHFVD 615

Query: 827 GVCSCGDYW 835
           G C+CGDYW
Sbjct: 616 GSCTCGDYW 624



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 196/430 (45%), Gaps = 65/430 (15%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
            +++H  V++ G DS   +   L   YA       +  L  R  +    + + S I A+S
Sbjct: 40  ASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPT-TIFYTSAIHAHS 98

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
           + G  L  L L  +M   GL+  A+T  A+L AC   S   LG  +HA   K   +   Y
Sbjct: 99  SRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGLS---LGRALHAYAFKLALSGDSY 155

Query: 197 VANALIAMY-------------------------------ARCGKMTEAAGVLYQLENKD 225
           VA AL++MY                               A  G + +A  +   L  KD
Sbjct: 156 VATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKD 215

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
            + WN+M+ G+ Q+    +A+Q FR +  +  +PD+V  V  +SA  +LG + +GK LH+
Sbjct: 216 FICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHS 275

Query: 286 YAIKQGFVS-DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
           Y      V  ++++   L+DMY KC  +     VF+ +  +D + W  +I GYA +    
Sbjct: 276 YVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSR 335

Query: 345 KALELFRTVQLEGL-DADVMIIGSVLMAC--SGL----KCMSQTKEIHGYIIRKGLSDLV 397
           KALE+F  ++ +GL   D+  IG +L AC  SGL    +   Q+ E H Y I   +    
Sbjct: 336 KALEMFVQLRDQGLWPTDITFIG-LLNACSHSGLVEEGRSFFQSME-HEYGIDPKIEH-- 391

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS----------------YVHN 440
               +VD+ G+ G I+ + ++ +S+  + D V W S++++                 V N
Sbjct: 392 -YGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVAN 450

Query: 441 GLANEALELF 450
           GLAN  + + 
Sbjct: 451 GLANSGMYIL 460



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 185/461 (40%), Gaps = 84/461 (18%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  +  L  +    T   + + + A+ S G  L  L   S M   G+   A T 
Sbjct: 66  YAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTL 125

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA----------------- 104
              + AC   + L  G  +H    K       ++  +L++MYA                 
Sbjct: 126 SASLPAC---RGLSLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPD 182

Query: 105 ----------KCY----DFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFRE 150
                      CY        AR+LFD +  K D + WN++I  Y+  G+  EAL LFR 
Sbjct: 183 PHVVSVTAMLTCYANMGALDDARRLFDGLPRK-DFICWNAMIDGYTQHGKPNEALQLFRR 241

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ--NLQVYVANALIAMYARC 208
           M R     +  T V  L A         G  +H + VK+ +   L V VA AL+ MY +C
Sbjct: 242 MLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLH-SYVKNSRCVQLNVRVATALVDMYCKC 300

Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
           G + +A  V + + NKD V WN+M+ G+  +    KA++ F +L+  G  P  +  +  +
Sbjct: 301 GSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLL 360

Query: 269 SASGRLGNLLNGKEL-----HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
           +A    G +  G+       H Y I           +  ++ Y   C V+ +GR      
Sbjct: 361 NACSHSGLVEEGRSFFQSMEHEYGI-----------DPKIEHYG--CMVDLLGR------ 401

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
                      AG  +        E F  VQ   +  D ++  S+L AC   K M+  + 
Sbjct: 402 -----------AGLIE--------EAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQR 442

Query: 384 IHGYIIRKGLSD---LVILNAIVDVYGKCGNIDYSRNVFES 421
           I  +++  GL++    ++L+ I    GK   +   R++ ++
Sbjct: 443 IADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKA 483



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA  +F  +  + +  WNAM+  Y  +G+  + LE + ++R  G+     T
Sbjct: 296 MYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDIT 355

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC+    ++ G      +  + G D        +V +  +     +A  L   +
Sbjct: 356 FIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSL 415

Query: 120 GEKEDVVLWNSIISA 134
               D V+W S+++A
Sbjct: 416 TITPDAVMWVSLLAA 430



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 52/112 (46%)

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
           ++T   A S  ++ S  ++  EL+  ++RKG + + +VA  L   YA  G LD +  +  
Sbjct: 21  ALTADRAASLLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLG 80

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
             +    I +TS I+A+   G     + L   M +E   P   T  A L AC
Sbjct: 81  RTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPAC 132


>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/564 (38%), Positives = 346/564 (61%), Gaps = 6/564 (1%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +L  G +LHA+ IK G  +   + + L++ Y+K        ++F+    +   +W+++I+
Sbjct: 35  SLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVIS 94

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS- 394
            +AQN+  L +L  FR +  +G+  D  I  S   +C  L  +   K +H + ++     
Sbjct: 95  SFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHL 154

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF--YL 452
           D+ + ++++D+Y KCG+I Y+ NVF+ +  ++VVSW+ +I  YV  G  +E+L LF  +L
Sbjct: 155 DIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFL 214

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           + E N   +  TL S L      ++L+ G+ ++G   +  F+    VASSL+ +Y++CG 
Sbjct: 215 VEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGV 274

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA-ESFAPDHITFLALLY 571
           ++ A  VF  V  ++L +W +M+ A   H       +LF KM++      + ITFL +LY
Sbjct: 275 VEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLY 334

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           ACSH+GL+ +GK + E+M+ DY ++P  +HY+ +VDLLGRA  L +A + +  M +EPT 
Sbjct: 335 ACSHAGLVEKGKYYFELMK-DYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTE 393

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
            VW ALL  CR+H N +L   VA ++ EL   + G +V++SN +AA+ +W++  + R  M
Sbjct: 394 SVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMM 453

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           R  G+KK  G SW+E GN+IH+F A D+SH++S EIY KL E+ E++++  GYVA T FV
Sbjct: 454 RDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDK-AGYVADTSFV 512

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           L  V+ EEK + +  HSERLAIA+G +    G  IR+ KNLRVC DCH+  K +S+  GR
Sbjct: 513 LKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGR 572

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
            ++VRD NRFH FE G C+CGDYW
Sbjct: 573 VIIVRDNNRFHRFEDGKCTCGDYW 596



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 194/376 (51%), Gaps = 9/376 (2%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G+++HA  +K G      +++ LI  Y++      +  + +   +K + +W+S+++ F Q
Sbjct: 39  GLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQ 98

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           NDL   ++ +FR +   G  PD     +A  + G L +L   K LH +A+K  +  D+ +
Sbjct: 99  NDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFV 158

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT--VQLE 356
           G++++DMYAKC  + Y   VF +M  ++ +SW+ +I GY Q     ++L LF+   V+ E
Sbjct: 159 GSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEE 218

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
               +   + SVL  C G   +   + IHG   +    S   + ++++ +Y KCG ++ +
Sbjct: 219 NEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEA 278

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE-ANVESDSITLVSALSAASS 474
            +VFE +  +++  W +M+ +   +   ++  ELF  M     ++++ IT +  L A S 
Sbjct: 279 YDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSH 338

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDL-ILW 531
             +++KGK    F + K + +E      S++VD+  R G L+ A K+   +  +    +W
Sbjct: 339 AGLVEKGKYY--FELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVW 396

Query: 532 TSMINANGLHGRGKVA 547
            +++    LHG  K+A
Sbjct: 397 GALLTGCRLHGNTKLA 412



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 175/381 (45%), Gaps = 10/381 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
            Y K      + Q+F     ++  TW++++ ++  N  PL  L  +  M   G+  D   
Sbjct: 64  FYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHI 123

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP   K+C +L  L     +H   LK  Y    F+ +S++ MYAKC D   A  +FD M 
Sbjct: 124 FPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMP 183

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFR----EMQRVGLVTNAYTFVAALQACEDSSFE 176
            + +VV W+ +I  Y   G+  E+L LF+    E +  G+  N +T  + L+ C  S+  
Sbjct: 184 YR-NVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGV--NDFTLSSVLRVCGGSTLL 240

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            +G  IH  + K+  +   +VA++LI++Y++CG + EA  V  ++  ++   WN+ML   
Sbjct: 241 QMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIAC 300

Query: 237 VQNDLYCKAMQFFRELQG-AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            Q+    K  + F +++   G K + +  +  + A    G +  GK         G    
Sbjct: 301 AQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPG 360

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAG-YAQNNCHLKALELFRTV 353
            Q  +T++D+  +   +N   ++  +M  +   S W  ++ G     N  L +    R  
Sbjct: 361 TQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVS 420

Query: 354 QLEGLDADVMIIGSVLMACSG 374
           +L  + + + ++ S   A +G
Sbjct: 421 ELGSVSSGLHVMLSNAYAAAG 441



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 182/374 (48%), Gaps = 16/374 (4%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           + L  G ++H  ++K G  +   + + L+  Y+K +    + Q+F     K     W+S+
Sbjct: 34  RSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKS-ATTWSSV 92

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           IS+++ +   L +L  FR M R G+  + + F +A ++C   S   +   +H   +K+  
Sbjct: 93  ISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAY 152

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR- 250
           +L ++V +++I MYA+CG +  A  V  ++  ++ VSW+ ++ G+VQ     ++++ F+ 
Sbjct: 153 HLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKR 212

Query: 251 ---ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
              E +  G     + +V  V     L  L  G+ +H  + K  F S   + ++L+ +Y+
Sbjct: 213 FLVEEENEGVNDFTLSSVLRVCGGSTL--LQMGRLIHGLSFKTSFDSSCFVASSLISLYS 270

Query: 308 KCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-LEGLDADVMIIG 366
           KC  V     VF ++T ++   W  ++   AQ+    K  ELF  ++ + G+ A+ +   
Sbjct: 271 KCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFL 330

Query: 367 SVLMACSGLKCMSQTKE----IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
            VL ACS    + + K     +  Y I  G       + +VD+ G+ G ++ +  + E +
Sbjct: 331 CVLYACSHAGLVEKGKYYFELMKDYGIEPGTQH---YSTMVDLLGRAGKLNDAVKLIEEM 387

Query: 423 ESKDVVS-WTSMIS 435
             +   S W ++++
Sbjct: 388 PMEPTESVWGALLT 401


>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
 gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/626 (37%), Positives = 358/626 (57%), Gaps = 43/626 (6%)

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +  + E K+S  +N+++ G  +N  +  ++ FF  +      PD++     + ++  
Sbjct: 93  AISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAA 152

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ----DFIS 329
           L N   G+ LH   +K G   D  +  +L+DMY K   +    +VF +          + 
Sbjct: 153 LSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLI 212

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W  +I GY +    +KA ELF ++  +                                 
Sbjct: 213 WNVLIHGYCRMGDLVKATELFDSMPKK--------------------------------- 239

Query: 390 RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
                D    N++++ + K G++  ++ +F  +  K+VVSWT+M++ +  NG   +ALE 
Sbjct: 240 -----DTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALET 294

Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
           F+ M E     +  T+VSALSA + +  L  G  ++ ++   GF L   + ++LVDMYA+
Sbjct: 295 FFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAK 354

Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           CG ++ A KVF+  + K L++W+ MI    +HG  + A+  F  M+     PD + FLA+
Sbjct: 355 CGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAV 414

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           L ACSHSG +NEG KF + MR  Y ++P  +HY  +VD+LGRA  L+EA +F+R+M I P
Sbjct: 415 LNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITP 474

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
              VW AL  ACR H N E+ E+ +KKLL+L+P +PG+YV +SN +A+  +W D E+VR+
Sbjct: 475 DFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRV 534

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
            MR  G  K PG S+IE+ +K+H F+A D +H+ + EIY KL EI+    RE GY  + +
Sbjct: 535 SMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISAS-AREKGYTKEIE 593

Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
            VLHN+EEEEK + L  HSE+LA+A+G++ +  G+ +RI KNLRVCVDCHSF K  S++ 
Sbjct: 594 CVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMS 653

Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
            RE+++RD  RFHHF  GVCSCGDYW
Sbjct: 654 KREIILRDMKRFHHFNDGVCSCGDYW 679



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 196/439 (44%), Gaps = 55/439 (12%)

Query: 7   SVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIK 66
           SV  A  +F +   +  + +NA++     N      +  +  M    IS D  TFP V+K
Sbjct: 89  SVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLK 148

Query: 67  ACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE---KE 123
           + A L +   G  +H  +LK G +   F+  SLV MY K  +   A ++FD   E     
Sbjct: 149 SAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNG 208

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            V++WN +I  Y   G  ++A  LF  M +    T ++                      
Sbjct: 209 SVLIWNVLIHGYCRMGDLVKATELFDSMPKKD--TGSW---------------------- 244

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
                          N+LI  + + G M  A  +  ++  K+ VSW +M+ GF QN    
Sbjct: 245 ---------------NSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPE 289

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           KA++ F  +   G +P+    V+A+SA  ++G L  G  +H Y    GF  +L IG  L+
Sbjct: 290 KALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALV 349

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           DMYAKC  + +  +VF++   +  + W+ +I G+A +    KAL+ F  ++  G   D +
Sbjct: 350 DMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSV 409

Query: 364 IIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
           +  +VL ACS       GLK     +   GY+I   +    +   +VD+ G+ G +D + 
Sbjct: 410 VFLAVLNACSHSGQVNEGLKFFDNMRR--GYLIEPSMKHYTL---VVDMLGRAGRLDEAL 464

Query: 417 NVFESIE-SKDVVSWTSMI 434
               ++  + D V W ++ 
Sbjct: 465 KFIRAMPITPDFVVWGALF 483



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 5/235 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           + K G +  A++LF K+ ++ V +W  M+  +  NG+P + LET+  M   G   + +T 
Sbjct: 251 FMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTI 310

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              + ACA +  LD G +IH  +   G+     I  +LV MYAKC +   A ++F    E
Sbjct: 311 VSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKE 370

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K  +++W+ +I  ++  G   +AL  F  M+  G   ++  F+A L AC  S     G++
Sbjct: 371 K-GLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLK 429

Query: 182 IHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
                ++ G  ++  + +   ++ M  R G++ EA   +  +    D V W ++ 
Sbjct: 430 FF-DNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALF 483



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 5/183 (2%)

Query: 380 QTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
           + ++IHG + R    S   ++   +       ++DY+ ++F+  E K+   + ++I    
Sbjct: 57  KLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLA 116

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
            N     ++  F LM +  +  D +T    L +A++LS    G+ L+  I++ G   +  
Sbjct: 117 ENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSF 176

Query: 499 VASSLVDMYARCGALDIANKVFN----CVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
           V  SLVDMY +   L  A KVF+     V+   +++W  +I+     G    A +LF  M
Sbjct: 177 VRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSM 236

Query: 555 EAE 557
             +
Sbjct: 237 PKK 239



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 9/139 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  AE++F +  ++ +  W+ M+  +  +G   + L+ +  M+  G   D+  
Sbjct: 351 MYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVV 410

Query: 61  FPCVIKACAMLKDLDCGAKI-----HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           F  V+ AC+    ++ G K       G +++        +V+    M  +     +A + 
Sbjct: 411 FLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVD----MLGRAGRLDEALKF 466

Query: 116 FDRMGEKEDVVLWNSIISA 134
              M    D V+W ++  A
Sbjct: 467 IRAMPITPDFVVWGALFCA 485


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/563 (38%), Positives = 354/563 (62%), Gaps = 12/563 (2%)

Query: 282 ELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           +LH  A++ G F SD    + L+ MY  C       R F ++   + +  T + +GY +N
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ---TKEIHGYIIRKGLS-DL 396
           N    +LELFR + +    A V+   + L+A S    +     T  +H  I + G   + 
Sbjct: 174 NLVYHSLELFRAM-IASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNA 232

Query: 397 VILNAIVDVYGKCG--NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
            ++N ++D Y K G  +++ +R VF+++E +DVVSW SMI+ Y  NG++ EA+ L+  M 
Sbjct: 233 GVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKML 291

Query: 455 E--ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
                ++ +++ L + L A +    ++ GK ++  ++R G      V +S+VDMY++CG 
Sbjct: 292 NVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGR 351

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +++A++ F  ++ K+++ W++MI   G+HGRG+ A+++F +M+     P++ITF+++L A
Sbjct: 352 VEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAA 411

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CSH+GL++EG+ +   M+ ++ ++   EHY C+VDLLGRA  L+EAY  ++ M+++P A 
Sbjct: 412 CSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAA 471

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           +W ALL ACR+H N EL E+  K+L ELD  N G YVL+SN++A +R WKDVE++R+ ++
Sbjct: 472 IWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVK 531

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
              ++K PG S  E+  KI+ F   DKSH +  EIY  L ++ E+++ E GYV  T  VL
Sbjct: 532 TRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQ-EAGYVPNTGSVL 590

Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
           H+++EEEK   L  HSE+LA+A+ ++ S   S+I I KNLRVC DCH+  K ++++  RE
Sbjct: 591 HDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITERE 650

Query: 813 LVVRDANRFHHFEAGVCSCGDYW 835
           +++RD  RFHHF+ G+CSC DYW
Sbjct: 651 IIIRDLQRFHHFKDGLCSCRDYW 673



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 196/371 (52%), Gaps = 11/371 (2%)

Query: 181 EIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           ++H   ++SG      Y A+AL+ MY  C +  +A     ++ + + V   +M +G+V+N
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 240 DLYCKAMQFFRELQGAGQKP--DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           +L   +++ FR +  +      D+   + A SAS R+ +      LHA   K GF  +  
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAG 233

Query: 298 IGNTLMDMYAKCCCVNY-MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL- 355
           + NT++D YAK    +  + R  +    +D +SW ++IA YAQN    +A+ L+  +   
Sbjct: 234 VVNTMLDSYAKGGSRDLEVARKVFDTMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNV 293

Query: 356 -EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNID 413
             G+  + + + +VL+AC+    +   K IH  ++R GL + V +  +IVD+Y KCG ++
Sbjct: 294 GGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVE 353

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +   F  I+ K+++SW++MI+ Y  +G   EALE+F  M  + +  + IT +S L+A S
Sbjct: 354 MASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACS 413

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLIL 530
              +L +G+      +++ F +E  V     +VD+  R G LD A  +   ++ K D  +
Sbjct: 414 HAGLLDEGRYWYN-AMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAI 472

Query: 531 WTSMINANGLH 541
           W ++++A  +H
Sbjct: 473 WGALLSACRIH 483



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 187/381 (49%), Gaps = 13/381 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS--VDA 58
           MY  C   +DA + FD++         AM   YV N      LE +  M     +  VD 
Sbjct: 138 MYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDE 197

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK--CYDFRKARQLF 116
                   A A + D    A +H L+ K G++    +VN+++  YAK    D   AR++F
Sbjct: 198 AAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVF 257

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG--LVTNAYTFVAALQACEDSS 174
           D M  + DVV WNS+I+ Y+ +G   EA+GL+ +M  VG  +  NA    A L AC  + 
Sbjct: 258 DTM--ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAG 315

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  IH   V+ G    VYV  +++ MY++CG++  A+    +++ K+ +SW++M+T
Sbjct: 316 AIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMIT 375

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GF 292
           G+  +    +A++ F E++ +G +P+ +  ++ ++A    G L  G+  +  A+KQ  G 
Sbjct: 376 GYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYN-AMKQEFGI 434

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALELF 350
            + ++    ++D+  +  C++    +  +M  + D   W  +++      N  L  + + 
Sbjct: 435 EAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVK 494

Query: 351 RTVQLEGLDADVMIIGSVLMA 371
           R  +L+  ++   ++ S + A
Sbjct: 495 RLFELDASNSGYYVLLSNIYA 515


>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Vitis vinifera]
          Length = 700

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 246/730 (33%), Positives = 387/730 (53%), Gaps = 48/730 (6%)

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           G +  V  WN IIS    +G   +AL +F  M       N  T  + L AC       LG
Sbjct: 5   GLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLG 64

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IHA  +K G    VYV  ++I MY++CG    A  V  + ENK++  WN M+  +V  
Sbjct: 65  KAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNE 124

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A+   R +Q  G KPD V T N + +    G+  NG +  A+ +    V   Q+G
Sbjct: 125 GKVEDALGLLRSMQKDGWKPD-VITYNTILS----GHARNGLKTQAFELLSEMV---QMG 176

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-- 357
                                     + +S+  +I+G+ Q+    +AL++FR +Q     
Sbjct: 177 -----------------------LKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDG 213

Query: 358 ----------LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVY 406
                     +  + + I   L AC+ L    Q KEIHGY +R G   ++ + +A+VD+Y
Sbjct: 214 CNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMY 273

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            KC ++D +  VF  I+ ++ VSW ++++ Y++N    EAL+LF  M    ++  SIT +
Sbjct: 274 AKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFM 333

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFN-LEGSVASSLVDMYARCGALDIANKVFNCVQT 525
               A   ++ ++ G+ L+G+  +   + L+ ++AS+L+DMYA+CG++  A  VF+    
Sbjct: 334 ILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVE 393

Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           KD+ LW +MI+A  +HG  + A  +F +ME     PDHITF++LL AC+  GL+ EG K+
Sbjct: 394 KDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKY 453

Query: 586 LEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
              M   Y +    EHY C+V +LG A  L+EA  F+R M   P A +W  LL ACRVHS
Sbjct: 454 FNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHS 513

Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           N E+GE  AK L EL+P N  NY+L+SN++ +S  W   + +R  MRG  L      S++
Sbjct: 514 NPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYL 573

Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
            +G+ I +F   + SH E +EI +   ++  K+E  G +     F   + EE+E      
Sbjct: 574 TVGSHICTFKGGESSHPELEEILEAWDKLARKMELSGYFPLDPVF---DDEEKELDPFSC 630

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
            H+E+LAI +G++ S     + ++KN+R+C+DCH+  KL+S++ GRE+ V+D   +HH +
Sbjct: 631 LHTEKLAICFGIISSNTYRPVHVSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHHMK 690

Query: 826 AGVCSCGDYW 835
            G+CSC D W
Sbjct: 691 DGICSCQDRW 700



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 164/603 (27%), Positives = 281/603 (46%), Gaps = 66/603 (10%)

Query: 20  QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAK 79
           Q TV +WN ++   V NG     L+ +SRM       +  T   ++ AC  LK L  G  
Sbjct: 7   QPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKA 66

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           IH + LK G     ++  S++ MY+KC  +  A ++F +  E ++  +WN +I+AY   G
Sbjct: 67  IHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVK-AENKNTAMWNEMIAAYVNEG 125

Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
           +  +ALGL R MQ+ G   +  T+   L     +  +T   E+ +  V+ G    V    
Sbjct: 126 KVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNV---- 181

Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-- 257
                                      VS+N +++GF Q+ L  +A++ FR +Q      
Sbjct: 182 ---------------------------VSFNVLISGFQQSGLSYEALKVFRIMQSPSDGC 214

Query: 258 ----------KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
                     +P+ +    A+ A   L     GKE+H Y ++ GF  ++ + + L+DMYA
Sbjct: 215 NPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYA 274

Query: 308 KCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
           KC  ++   +VF+++  ++ +SW  ++AGY  N    +AL+LF  +  EGL    +    
Sbjct: 275 KCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMI 334

Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLSDL--VILNAIVDVYGKCGNIDYSRNVFESIESK 425
           +  AC  +  +   + +HGY  +  L +L   I +A++D+Y KCG+I  +++VF+S   K
Sbjct: 335 LFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEK 394

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KEL 484
           DV  W +MIS++  +G+A  A  +F  M    +  D IT VS LSA +   ++++G K  
Sbjct: 395 DVPLWNAMISAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYF 454

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIA-NKVFNCVQTKDLILWTSMINANGLHGR 543
           N   I  G        + +V +    G LD A + +       D  +W +++ A  +H  
Sbjct: 455 NSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSN 514

Query: 544 ---GKVAIDLFYKMEAESFAPDHIT-FLALLYACSHSGLIN---------EGKKFLEIMR 590
              G+ A    +++E     PD+ T ++ L      SG+ +          G+K L I  
Sbjct: 515 PEIGERAAKALFELE-----PDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKE 569

Query: 591 CDY 593
           C Y
Sbjct: 570 CSY 572



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 184/388 (47%), Gaps = 49/388 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS   AE++F K   +    WN M+ AYV+ G+    L     M+  G   D  T
Sbjct: 89  MYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVIT 148

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF-IVNSLVAMYAKCYDFRKARQLFDRM 119
           +  ++   A                + G  +  F +++ +V                 +M
Sbjct: 149 YNTILSGHA----------------RNGLKTQAFELLSEMV-----------------QM 175

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQ------------RVGLVTNAYTFVAAL 167
           G K +VV +N +IS +  SG   EAL +FR MQ             + +  N  T   AL
Sbjct: 176 GLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGAL 235

Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
            AC D +    G EIH  T+++G    ++V++AL+ MYA+C  M  A  V ++++ +++V
Sbjct: 236 PACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTV 295

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
           SWN+++ G++ N    +A++ F E+ G G +P  +  +    A G +  +  G+ LH YA
Sbjct: 296 SWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYA 355

Query: 288 IKQGFVSDLQ--IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
            K   + +L+  I + L+DMYAKC  +     VF     +D   W  +I+ ++ +     
Sbjct: 356 AKCQ-LDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARN 414

Query: 346 ALELFRTVQLEGLDADVMIIGSVLMACS 373
           A  +F  ++L G+  D +   S+L AC+
Sbjct: 415 AFAVFVQMELLGILPDHITFVSLLSACA 442



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 4/236 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  A ++F ++  R   +WNA++  Y+ N +P   L+ +  M   G+   + T
Sbjct: 272 MYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSIT 331

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDS-TDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  +  AC  +  +  G  +HG   KC  D   + I ++L+ MYAKC     A+ +FD  
Sbjct: 332 FMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSE 391

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC-EDSSFETL 178
            EK DV LWN++ISA+S  G    A  +F +M+ +G++ +  TFV+ L AC  D   E  
Sbjct: 392 VEK-DVPLWNAMISAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEG 450

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
               ++  +  G    +     ++ +    G + EA   + Q+    D+  W ++L
Sbjct: 451 WKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLL 506



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+LDA+ +FD   ++ V  WNAM+ A+  +G        + +M +LGI  D  T
Sbjct: 374 MYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILPDHIT 433

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ ACA    ++ G K  + + +  G  +T      +V +        +A     +M
Sbjct: 434 FVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQM 493

Query: 120 GEKEDVVLWNSIISA 134
               D  +W +++ A
Sbjct: 494 PYPPDACMWATLLQA 508


>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
 gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
          Length = 539

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 217/532 (40%), Positives = 327/532 (61%), Gaps = 55/532 (10%)

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSR 416
           +  DV+ + +VL AC+ +      K +HG  +R G   DL + NA+VD+Y KCG +D + 
Sbjct: 9   MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE----------------- 459
            VF+ I+ KDVVSW +M++ Y   G   +AL LF  M E N+E                 
Sbjct: 69  KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128

Query: 460 -----------------SDSITLVS------------------ALSAASSLSILKKGKEL 484
                            +D++ L S                  AL A + L+ L+ G+++
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188

Query: 485 NGFIIRKGFNLEG-SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
           + +I+R  F+     VA+ L+DMYA+ G +D+A  VF+ ++ K+ + WTS++   G+HGR
Sbjct: 189 HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGR 248

Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
           GK A+++F +M      PD +T L +LYACSHSG+I++G +F   M  ++ + P  EHYA
Sbjct: 249 GKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYA 308

Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
           C+VDLLGRA  L EA + +  MQ+EP++ VW ALL  CR+H+N ELGE  AK+LLEL+  
Sbjct: 309 CMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSE 368

Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           N G+Y L+SN++A +R+WKDV +VR  M+ SG++K PG SW++      +F   DK+H +
Sbjct: 369 NDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQ 428

Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
           S +IY+ L  +T+++ +  GYV +T F LH+V++EEKV +L+ HSE+LA+AYG+L S  G
Sbjct: 429 SKQIYEILRSLTQRI-KVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPG 487

Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + IRITKNLRVC DCH+    +S +   E+++RD++RFHHF+ G CSC  YW
Sbjct: 488 APIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 71/382 (18%)

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
           + +  +  + V  L AC        G  +H   V+SG    ++V NAL+ MYA+CG + E
Sbjct: 7   IDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDE 66

Query: 214 AAGVLYQLENKDSVSWNSMLTG-----------------------------------FVQ 238
           A+ V  +++ KD VSWN+M+ G                                   F Q
Sbjct: 67  ASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQ 126

Query: 239 NDLYCKAMQFFRELQGAGQ-----------------KPDQVCTVNAVSASGRLGNLLNGK 281
             L C+ +  FRE+Q                     KP+      A+ A  RL  L  G+
Sbjct: 127 RGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGR 186

Query: 282 ELHAYAIKQGFVSD-LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           ++HAY ++  F S  L + N L+DMYAK   ++    VF  +  ++F+SWT+++ GY  +
Sbjct: 187 QIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMH 246

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVI 398
               +ALE+F  ++  GL  D + +  VL ACS    + Q  E    + ++   +     
Sbjct: 247 GRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEH 306

Query: 399 LNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS-YVHNGL------ANEALELF 450
              +VD+ G+ G ++ +  + E ++     + W +++S   +H  +      A + LEL 
Sbjct: 307 YACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLEL- 365

Query: 451 YLMNEANVESD-SITLVSALSA 471
                 N E+D S TL+S + A
Sbjct: 366 ------NSENDGSYTLLSNIYA 381



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 152/335 (45%), Gaps = 56/335 (16%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D  +   V+ ACA +     G  +HG+ ++ G     F+ N+LV MYAKC    +A ++F
Sbjct: 12  DVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVF 71

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLF---------------------------- 148
           DR+ EK DVV WN++++ YS  G+  +ALGLF                            
Sbjct: 72  DRIKEK-DVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLG 130

Query: 149 -------REMQ----------------RVGLV-TNAYTFVAALQACEDSSFETLGMEIHA 184
                  REMQ                + GLV  N +T   AL AC   +   LG +IHA
Sbjct: 131 CETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHA 190

Query: 185 ATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
             +++   +  +YVAN LI MYA+ G +  A  V   L+ K+ VSW S++TG+  +    
Sbjct: 191 YILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGK 250

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTL 302
           +A++ F E++  G +PD V  +  + A    G +  G E      K+ G +   +    +
Sbjct: 251 EALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACM 310

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG 336
           +D+  +   +N    +   M  +   I W  +++G
Sbjct: 311 VDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSG 345



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 58/291 (19%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA-- 58
           MY KCG V +A ++FD++ ++ V +WNAM+  Y   G     L  + +MR   I ++   
Sbjct: 57  MYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVS 116

Query: 59  --------------------------------------------------FTFPCVIKAC 68
                                                             FT  C + AC
Sbjct: 117 WSAVIAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIAC 176

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVL 127
           A L  L  G +IH  +L+  +DS   ++ N L+ MYAK  D   AR +FD + +K + V 
Sbjct: 177 ARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQK-NFVS 235

Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
           W S+++ Y   G+  EAL +F EM+RVGL  +  T +  L AC  S     G+E   +  
Sbjct: 236 WTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMS 295

Query: 188 KSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
           K    +  Q + A  ++ +  R G++ EA  ++  ++    S+ W ++L+G
Sbjct: 296 KEFGVIPGQEHYA-CMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSG 345



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 83/138 (60%), Gaps = 3/138 (2%)

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           + + ++  D ++LV+ L A +S+     GK ++G  +R G   +  V ++LVDMYA+CG 
Sbjct: 4   LGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGM 63

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           +D A+KVF+ ++ KD++ W +M+N     GR + A+ LF KM  E+   + +++ A++ A
Sbjct: 64  VDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAA 123

Query: 573 CSHSGLINEGKKFLEIMR 590
            +  GL   G + L++ R
Sbjct: 124 FAQRGL---GCETLDVFR 138


>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/630 (36%), Positives = 368/630 (58%), Gaps = 8/630 (1%)

Query: 69  AMLKDLDCGAKIHGLVLKCGY-DSTDFI--VNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           A  + L+    +HG  +  G   S +FI   + L   YA C     AR+LFD + +   +
Sbjct: 90  AATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPS-L 148

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLGMEIHA 184
            LWN+II  Y   G   +AL +F  M   G    + YTF   ++AC   S   +G+ IH 
Sbjct: 149 FLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHG 208

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
             + SG +  ++V N+L+AMY  CGK+  A  V   +  +  VSWN+M++G+ QN    +
Sbjct: 209 RALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEE 268

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
           A+  F  +  A  +PD    V+A+ + G L  L  G ++H    K      +++ N L+D
Sbjct: 269 ALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVD 328

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           MY++C  ++    VF +   +D I+WT++I GY  N     AL L   +QL+G+  + + 
Sbjct: 329 MYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVT 388

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           + S+L AC+ L C+ Q K +H +++RK L SD++++ A++D+Y KC  + YS  VF    
Sbjct: 389 LASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTS 448

Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
            K  V W +++S  +HN LA EA+ LF  M    VE++  T  S + A + L+ LK+   
Sbjct: 449 MKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMN 508

Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV--QTKDLILWTSMINANGLH 541
           L+ +++R GF  + +V + L+DMY++CG+LD A+K+F+ +  + KD+I+W+ +I   G+H
Sbjct: 509 LHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMH 568

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G G+ A+ LF +M      P+ ITF ++L+ACSH GL+++G    + M  +Y   P P H
Sbjct: 569 GHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNH 628

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           Y C+VDLLGRA  L+EAY  ++SM  +    +W ALLGAC +H N ELGE+ A++L EL+
Sbjct: 629 YTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELE 688

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
           P + GNY+L++N++AA  +WKD E  ++++
Sbjct: 689 PESTGNYILLANIYAAVGRWKDAENHKLQL 718



 Score =  305 bits (782), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 182/569 (31%), Positives = 307/569 (53%), Gaps = 16/569 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS-VDAFT 60
           Y  CG V  A +LFD +S  ++F WNA++  YV  G     L  +  M   G    D +T
Sbjct: 127 YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYT 186

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FP VIKAC+++  L+ G  IHG  L  G+ S  F+ NSL+AMY  C     ARQ+F+ M 
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVM- 245

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K  VV WN++IS +  +G+  EAL +F  M    +  ++ T V+AL +C       LG+
Sbjct: 246 LKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGI 305

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H    K+    ++ V NAL+ MY+RCG M EA+ V  + + KD ++W SM+ G++ N 
Sbjct: 306 KVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNG 365

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+     +Q  G  P+ V   + +SA   L  L  GK LHA+ +++   SD+ +  
Sbjct: 366 NAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVT 425

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAKC  V+Y  +VF + + +  + W  +++G   N    +A+ LF+++ +E ++A
Sbjct: 426 ALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEA 485

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVF 419
           +     SV+ A + L  + Q   +H Y++R G +S + ++  ++D+Y KCG++DY+  +F
Sbjct: 486 NHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIF 545

Query: 420 ESIES--KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           + I +  KD++ W+ +I+ Y  +G    A+ LF  M  + ++ + IT  S L A S   +
Sbjct: 546 DEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGL 605

Query: 478 LKKGKELNGFIIRKGFNLEGSVASS----LVDMYARCGALDIANKVFNCVQ-TKDLILWT 532
           +  G  L  ++I    N   S   +    +VD+  R G LD A  +   +   ++  +W 
Sbjct: 606 VDDGLTLFKYMIE---NYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWG 662

Query: 533 SMINANGLHGR---GKVAIDLFYKMEAES 558
           +++ A  +H     G+VA +  +++E ES
Sbjct: 663 ALLGACLIHQNVELGEVAAERLFELEPES 691



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 215/427 (50%), Gaps = 5/427 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG V  A Q+F+ + +R+V +WN M+  +  NG P   L  ++ M    +  D+ T
Sbjct: 228 MYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSAT 287

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + +C  LK+L+ G K+H LV K        + N+LV MY++C    +A  +F    
Sbjct: 288 IVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETK 347

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK DV+ W S+I+ Y  +G    AL L   MQ  G+V NA T  + L AC        G 
Sbjct: 348 EK-DVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGK 406

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  ++   +  V V  ALI MYA+C  ++ +  V  +   K +V WN++L+G + N+
Sbjct: 407 SLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNE 466

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A+  F+ +     + +     + + A   L +L     LH+Y ++ GF+S + +  
Sbjct: 467 LAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVIT 526

Query: 301 TLMDMYAKCCCVNYMGRVFYQMT--AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            L+DMY+KC  ++Y  ++F ++    +D I W+ +IAGY  +     A+ LF  +   G+
Sbjct: 527 GLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGM 586

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYSR 416
             + +   SVL ACS    +     +  Y+I    S  +      +VD+ G+ G +D + 
Sbjct: 587 QPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAY 646

Query: 417 NVFESIE 423
           ++ +S+ 
Sbjct: 647 DLIKSMP 653



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 148/313 (47%), Gaps = 14/313 (4%)

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDV-YGKCGN 411
           + L A+V    S+L   +  + +++TK +HG+ I  GL    + + L + + V Y  CG 
Sbjct: 73  KSLIANVHRCDSLLCHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGC 132

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSALS 470
           +  +R +F+ +    +  W ++I  YV  G   +AL +F  ++       D  T    + 
Sbjct: 133 VPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIK 192

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           A S +S+L  G  ++G  +  GF+    V +SL+ MY  CG + +A +VFN +  + ++ 
Sbjct: 193 ACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVS 252

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W +MI+    +GR + A+ +F  M      PD  T ++ L +C H   +  G K  ++++
Sbjct: 253 WNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQ 312

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
            ++ L    E    LVD+  R   ++EA   V +   E     W +++    ++ N    
Sbjct: 313 KNH-LQEKIEVRNALVDMYSRCGGMDEA-SLVFAETKEKDVITWTSMINGYIMNGN---- 366

Query: 651 EIVAKKLLELDPG 663
              AK  L L P 
Sbjct: 367 ---AKSALALCPA 376


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/560 (39%), Positives = 340/560 (60%), Gaps = 5/560 (0%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +H+     GF       N L+ MYAKC C++    +F  +  +  +SW+ +I  YA 
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYAL 63

Query: 340 NNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG---LSD 395
           +    +AL LF  ++ +G ++ + M    V  AC  ++ + Q +EIH   +  G    S+
Sbjct: 64  HGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSN 123

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
            ++ NA++++Y +CG+++ +R VF++++  D  SWTSMI++   N    EALELF+ MN 
Sbjct: 124 AILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNL 183

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
             +   S+TL S L+A +    LK GK+++  +   GF+      ++L+DMYA+CG+L+ 
Sbjct: 184 EGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLEC 243

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           ++KVF  ++T++ + WT+MI A   HG+G  A++LF +M  E    D  TF+ +L ACSH
Sbjct: 244 SSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSH 303

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           +GLI E  +F   M  DY + P   HY   +D +GRA  L++A + + SM   P    W 
Sbjct: 304 AGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWK 363

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
            LL ACR+HS  E    VA+ L +L P +   Y L+ NV+AA+ ++ D  +VR  M   G
Sbjct: 364 TLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRG 423

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           LKK PG S+IE+ NK+H F+A D++H   DEI  +L ++  ++ RE GYV  T+ VLH V
Sbjct: 424 LKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRM-REAGYVPNTKDVLHAV 482

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
            EEEK Q++  HSE+LAIA+G++ +  G+ + I KNLRVC DCH+  K+++++  R +VV
Sbjct: 483 NEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVV 542

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD +RFHHFE G CSC DYW
Sbjct: 543 RDTHRFHHFEDGQCSCKDYW 562



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 214/432 (49%), Gaps = 23/432 (5%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G +IH  +  CG+       N LV+MYAKC    +AR +F+ + E+  VV W+++I AY+
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILER-TVVSWSAMIGAYA 62

Query: 137 ASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ--NL 193
             G+  EAL LF  M+  G V  NA TF     AC        G EIHA  + SG+  + 
Sbjct: 63  LHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSS 122

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
              + NAL+ MY RCG + EA  V   +++ D+ SW SM+T   +N    +A++ F  + 
Sbjct: 123 NAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMN 182

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
             G  P  V   + ++A    G L  GK++H+     GF S +     L+DMYAKC  + 
Sbjct: 183 LEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLE 242

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
              +VF  M  ++ +SWT +IA  AQ+    +ALELF+ + LEG+ AD      VL ACS
Sbjct: 243 CSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACS 302

Query: 374 GLKCMSQTKEIHGYIIRKGLSDLVILNA------IVDVYGKCGNIDYSRNVFESIE-SKD 426
               + ++ E    ++     D  I          +D  G+ G +  +  +  S+    +
Sbjct: 303 HAGLIKESLEFFHSMV----EDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPE 358

Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNE-ANVESDSITLVSALSAASSLSILKKGKELN 485
            ++W +++++   +  A  A ++  L+++ A  +S + TL+  + AA+       G+  +
Sbjct: 359 TLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAAT-------GRYGD 411

Query: 486 GFIIRKGFNLEG 497
              +RKG    G
Sbjct: 412 QMRVRKGMTDRG 423



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/278 (33%), Positives = 152/278 (54%), Gaps = 7/278 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           MY KCG + +A  +F+ + +RTV +W+AM+GAY  +G     L  + RMR  G +  +A 
Sbjct: 29  MYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAM 88

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCG--YDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           TF  V  AC +++DL+ G +IH L +  G    S   + N+L+ MY +C    +AR++FD
Sbjct: 89  TFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFD 148

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            M +  D   W S+I+A + + + LEAL LF  M   G+   + T  + L AC  S    
Sbjct: 149 TM-DHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALK 207

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           +G +IH+    SG +  V    AL+ MYA+CG +  ++ V   +E ++SVSW +M+    
Sbjct: 208 VGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALA 267

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQ---VCTVNAVSASG 272
           Q+    +A++ F+E+   G   D    +C + A S +G
Sbjct: 268 QHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAG 305



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 141/281 (50%), Gaps = 7/281 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGS+ +A ++FD +     F+W +M+ A   N E L  LE + RM + GI   + T
Sbjct: 133 MYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVT 192

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA    L  G +IH  +   G+ S+     +L+ MYAKC     + ++F  M 
Sbjct: 193 LASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAM- 251

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  + V W ++I+A +  GQ  EAL LF+EM   G+V +A TF+  L+AC  +      +
Sbjct: 252 ETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESL 311

Query: 181 EIHAATVK--SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFV 237
           E   + V+  +    + +   AL  +  R G++ +A  +++ +  + ++++W ++L    
Sbjct: 312 EFFHSMVEDYAIAPTETHYCRALDTI-GRAGRLQDAEELIHSMPFHPETLTWKTLLNACR 370

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTV--NAVSASGRLGN 276
            +    +A +    L     +     T+  N  +A+GR G+
Sbjct: 371 IHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGD 411



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 4/225 (1%)

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           +++G+ ++  +   GF+      + LV MYA+CG LD A  +FN +  + ++ W++MI A
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 538 NGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
             LHGRG+ A+ LF++M  +    P+ +TF  +  AC     + +G++   +     +L 
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 597 PWPEHYA-CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN-KELGEIVA 654
                    L+++  R   LEEA +   +M   P A  W +++ AC  +    E  E+  
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMD-HPDAFSWTSMITACTENCELLEALELFH 179

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
           +  LE  P        + N  A S   K  +Q+  R+  SG   +
Sbjct: 180 RMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSS 224


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/562 (37%), Positives = 343/562 (61%), Gaps = 4/562 (0%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G+ +HA+ IK  ++    +   L+  Y KC C+    +V  +M  ++ +SWT +I+ 
Sbjct: 67  LREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 126

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SD 395
           Y+Q     +AL +F  +       +     +VL +C     ++  K+IHG I++    S 
Sbjct: 127 YSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSH 186

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + + ++++D+Y K G I+ +R +FE +  +DVVS T++I+ Y   GL  EALE+F  +  
Sbjct: 187 IFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQS 246

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
             +  + +T  S L+A S L++L  GK+ +  ++R+       + +SL+DMY++CG L  
Sbjct: 247 EGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSY 306

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACS 574
           A ++F+ +  +  I W +M+     HG G+  ++LF  M  E    PD +T LA+L  CS
Sbjct: 307 AQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 366

Query: 575 HSGLINEGKKFLEIMRC-DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           H  + + G    + M   +Y + P  EHY C+VD+LGRA  ++EA++F++ M  +PTA V
Sbjct: 367 HGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGV 426

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
             +LLGACRVH + ++GE V  +L+E++P N GNYV++SN++A++ +W+DV  VR  M  
Sbjct: 427 LGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQ 486

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
             + K PG SWI+    +H F A D++H   +E+  K+ EI+ K+ ++ GYV     VL+
Sbjct: 487 KAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKM-KQAGYVPDISCVLY 545

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +V+EE+K +ML GHSE+LA+ +G++ + EG  IR+ KNLR+CVDCH+F K+ S++F RE+
Sbjct: 546 DVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREV 605

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
            +RD NRFH    G+CSCGDYW
Sbjct: 606 SLRDKNRFHQIVKGICSCGDYW 627



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 204/400 (51%), Gaps = 18/400 (4%)

Query: 35  SNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF 94
           SNG   R+ E    M +LG  +    +  ++ AC   + L  G ++H  ++K  Y    +
Sbjct: 31  SNG---RLQEALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATY 87

Query: 95  IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV 154
           +   L+  Y KC     AR++ D M EK +VV W ++IS YS +G   EAL +F EM R 
Sbjct: 88  LRTRLLIFYGKCDCLEDARKVLDEMPEK-NVVSWTAMISRYSQTGHSSEALSVFAEMMRS 146

Query: 155 GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEA 214
               N +TF   L +C  +S   LG +IH   VK   +  ++V ++L+ MYA+ G++ EA
Sbjct: 147 DGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEA 206

Query: 215 AGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
             +   L  +D VS  +++ G+ Q  L  +A++ F+ LQ  G +P+ V   + ++A   L
Sbjct: 207 REIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGL 266

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
             L +GK+ H + +++       + N+L+DMY+KC  ++Y  R+F  M  +  ISW  ++
Sbjct: 267 ALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAML 326

Query: 335 AGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
            GY+++    + LELFR ++ E  +  D + + +VL  CS  K M  T    G  I  G+
Sbjct: 327 VGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGK-MEDT----GLSIYDGM 381

Query: 394 --------SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
                    D      IVD+ G+ G ID +    + + SK
Sbjct: 382 VAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 421



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 144/270 (53%), Gaps = 2/270 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YGKC  + DA ++ D++ ++ V +W AM+  Y   G     L  ++ M       + FTF
Sbjct: 96  YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTF 155

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ +C     L  G +IHGL++K  YDS  F+ +SL+ MYAK     +AR++F+ + E
Sbjct: 156 ATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPE 215

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV   +II+ Y+  G   EAL +F+ +Q  G+  N  T+ + L A    +    G +
Sbjct: 216 R-DVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQ 274

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            H   ++        + N+LI MY++CG ++ A  +   +  + ++SWN+ML G+ ++ L
Sbjct: 275 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGL 334

Query: 242 YCKAMQFFRELQGAGQ-KPDQVCTVNAVSA 270
             + ++ FR ++   + KPD V  +  +S 
Sbjct: 335 GREVLELFRLMRDEKRVKPDAVTLLAVLSG 364



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 4/238 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + +A ++F+ + +R V +  A++  Y   G     LE + R++  G+  +  T
Sbjct: 196 MYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVT 255

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++ A + L  LD G + H  VL+        + NSL+ MY+KC +   A++LFD M 
Sbjct: 256 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMP 315

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
           E+   + WN+++  YS  G   E L LFR M+    V  +A T +A L  C     E  G
Sbjct: 316 ER-TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTG 374

Query: 180 MEIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           + I+   V     ++    +   ++ M  R G++ EA   + ++ +K +      L G
Sbjct: 375 LSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLG 432



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 9/245 (3%)

Query: 434 ISSYVHNGLANEAL-ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           IS    NG   EAL E+  L  E         L + L   +    L++G+ ++  +I+  
Sbjct: 26  ISQLCSNGRLQEALLEMVMLGPEIGFHCYDALLNACLDKRA----LREGQRVHAHMIKTR 81

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
           +     + + L+  Y +C  L+ A KV + +  K+++ WT+MI+     G    A+ +F 
Sbjct: 82  YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFA 141

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           +M      P+  TF  +L +C  +  +  GK+   ++   +  D      + L+D+  +A
Sbjct: 142 EMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLI-VKWNYDSHIFVGSSLLDMYAKA 200

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
             +EEA +    +           + G  ++  ++E  E+  +   E   G   NYV  +
Sbjct: 201 GQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSE---GMRPNYVTYA 257

Query: 673 NVFAA 677
           ++  A
Sbjct: 258 SLLTA 262


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/537 (39%), Positives = 329/537 (61%), Gaps = 2/537 (0%)

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+  Y K   +    ++F +M A++  +W  ++AG   +  + ++L  F  ++ EG+ 
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            D   +GS+   C+GL+ +   +++H Y++R GL  D+ + +++  +Y +CG +      
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
             ++ S ++VS  + IS    NG A  ALE F LM  A VE++++T VSA+++ S L+ L
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 183

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            +G++++   I+ G +    V +SLV MY+RCG L  + +V       DL+L ++MI+A 
Sbjct: 184 AQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAY 243

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
           G HG G+ A+ LF +M A    P+ +TFL LLYACSHSGL +EG    E+M   Y L P 
Sbjct: 244 GFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPS 303

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            +HY C+VDLLGR+  L EA   + SM ++P   +W  LL AC+     ++ E +A++++
Sbjct: 304 VKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVI 363

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           ELDP +  +YVL+SN+ A S +W+DV +VR  MR   ++K PG SW+E+  +IH F   D
Sbjct: 364 ELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGD 423

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           +SHS   EI + L E+  ++ R+ GY      V H++E+EEK   L  HSE+LAIA+  L
Sbjct: 424 ESHSRQREIVECLEEMMTRI-RQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFL 482

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
              EG  IR+ KNLRVC DCH   KL+S++ GRE+VVRD +RFHHF+ G CSCGDYW
Sbjct: 483 SLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 176/348 (50%), Gaps = 14/348 (4%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N L+  Y K  D   AR+LFD M  + +V  WN++++  + SG   E+LG F  M+R G+
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPAR-NVATWNAMVAGLTNSGLNEESLGFFFAMRREGM 62

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + Y   +  + C        G ++HA  V+SG +  + V ++L  MY RCG + +   
Sbjct: 63  QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEA 122

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
            L  L + + VS N+ ++G  QN     A++FF  ++GAG + + V  V+AV++   L  
Sbjct: 123 ALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 182

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G+++HA AIK G    + +  +L+ MY++C C+    RV  + +  D +  + +I+ 
Sbjct: 183 LAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA 242

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYII 389
           Y  +    KA+ LF+ +   G + + +   ++L ACS       G+ C     + +G   
Sbjct: 243 YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGL-- 300

Query: 390 RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
                 +     IVD+ G+ G ++ + ++  S+    D V W +++S+
Sbjct: 301 ---QPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 345



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 180/377 (47%), Gaps = 8/377 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +  A +LFD++  R V TWNAM+    ++G     L  +  MR  G+  D +  
Sbjct: 10  YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGL 69

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             + + CA L+D+  G ++H  V++ G D    + +SL  MY +C   R       R   
Sbjct: 70  GSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAAL-RALP 128

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             ++V  N+ IS  + +G    AL  F  M+  G+  NA TFV+A+ +C D +    G +
Sbjct: 129 SLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQ 188

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IHA  +K+G +  V V  +L+ MY+RCG + ++  V  +    D V  ++M++ +  +  
Sbjct: 189 IHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGH 248

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVN---AVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
             KA+  F+++  AG +P++V  +    A S SG     +N  EL       G    ++ 
Sbjct: 249 GQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTY--GLQPSVKH 306

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQLE 356
              ++D+  +  C+N    +   M  Q D + W T++ A   Q    +      R ++L+
Sbjct: 307 YTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELD 366

Query: 357 GLDADVMIIGSVLMACS 373
             D+   ++ S + A S
Sbjct: 367 PHDSASYVLLSNIRATS 383



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 111/237 (46%), Gaps = 5/237 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG + D E     +    + + N  +     NG+    LE +  MR  G+  +A T
Sbjct: 110 MYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVT 169

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA-RQLFDRM 119
           F   + +C+ L  L  G +IH L +K G D    ++ SLV MY++C     + R   +  
Sbjct: 170 FVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYS 229

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           G   D+VL +++ISAY   G   +A+GLF++M   G   N  TF+  L AC  S  +  G
Sbjct: 230 G--TDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEG 287

Query: 180 MEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
           M       K+ G    V     ++ +  R G + EA  ++  +    D V W ++L+
Sbjct: 288 MNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS 344


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 255/788 (32%), Positives = 431/788 (54%), Gaps = 33/788 (4%)

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           A  F   I+ACA+ + L     +H  + +  +     + N L+ ++ KC D   AR +F+
Sbjct: 7   ARRFEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFN 66

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           R+    +   W+ II AY +S +  +A  LF  M       +A+T+   + A    +   
Sbjct: 67  RVRLPNEYS-WSCIIQAYVSSSRIHDARALFDSMPGF----DAFTWNIMIAAYARINRLD 121

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
              E+    + SG+++  +    L+A YAR  ++ EA+ +  ++   D+V+  S+L G+ 
Sbjct: 122 DARELFHGMI-SGRDVVSWAI--LVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYA 178

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
            N    +A + F  + GAG +    C    ++A G+   +          + +G  + ++
Sbjct: 179 HNGHLAEAQELFDRIGGAGDRDATACNA-MIAAYGKNARV---------DLAEGLFAQIK 228

Query: 298 IGNT-----LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
           + N      L+  YA+   ++   + F +M  +D I++T + A  +       A E+ R 
Sbjct: 229 LRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRY 288

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
           +       DV+   ++L   S    + + + +   +  + ++  V+   +V++YGKCG +
Sbjct: 289 LSA----VDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATTVVAGTLVNLYGKCGRV 344

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D +R V +++  +  VSWT+MI++Y  NG A EA+ LF  M+    E   ITL+S + + 
Sbjct: 345 DDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSC 404

Query: 473 SSLSILKKGKELNGFIIRKG-FNLEGSVASSLVDMYARCGALDIANKVFNCV--QTKDLI 529
           + L  L  GK ++  I     F+    + ++++ MY +CG L++A +VF  V  +T+ ++
Sbjct: 405 AVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVV 464

Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSHSGLINEGKKFLEI 588
            WT+MI A   +G G+ AI+LF +M  +    P+ +TFL++L ACSH G + +  +    
Sbjct: 465 TWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCS 524

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNK 647
           M  D+ + P  +HY CLVDLLGRA  L EA + + R    E     W A L AC+++ + 
Sbjct: 525 MGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDL 584

Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           E  +  AK++ EL+P N    VL+SNV+AA  +  DV ++R  M+ SG+KK  G SWIEI
Sbjct: 585 ERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEI 644

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGH 767
            N++H F+  D SH    EIY +L  +  ++ +E GYV  T+ VL +V+EE+K Q+L  H
Sbjct: 645 NNRVHEFMVSDVSHPRKLEIYSELERLHREI-KEAGYVPDTKMVLRDVDEEKKAQLLGYH 703

Query: 768 SERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAG 827
           SERLA+A G++ +  G+ +R+ KNLRVC DCH+  K +S++ GR+++VRD +RFHHF+ G
Sbjct: 704 SERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDG 763

Query: 828 VCSCGDYW 835
           VCSCGDYW
Sbjct: 764 VCSCGDYW 771



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 168/601 (27%), Positives = 280/601 (46%), Gaps = 89/601 (14%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++GKCG    A  +F++V     ++W+ ++ AYVS+         +  M       DAFT
Sbjct: 51  LFGKCGDPDAARAVFNRVRLPNEYSWSCIIQAYVSSSRIHDARALFDSM----PGFDAFT 106

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +  +I A A +  LD   ++ HG++   G D   + +  LVA YA+     +A  LF RM
Sbjct: 107 WNIMIAAYARINRLDDARELFHGMI--SGRDVVSWAI--LVAGYARHDRLEEASALFRRM 162

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               D V   S++  Y+ +G   EA  LF    R+G                        
Sbjct: 163 -PLWDTVTCTSVLQGYAHNGHLAEAQELF---DRIG------------------------ 194

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
                       +      NA+IA Y +  ++  A G+  Q++ +++ SW+ +L  + QN
Sbjct: 195 ---------GAGDRDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQN 245

Query: 240 ---DLYCKAMQFFR------------------ELQGAGQKPDQVCTVNAVSASG------ 272
              DL  K+                       EL+GA +    +  V+ ++ +       
Sbjct: 246 GHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYS 305

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           R G+L   + L + A++   V+   +  TL+++Y KC  V+   RV   M  +  +SWT 
Sbjct: 306 RTGDLDEVRRLFS-AMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTA 364

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           +IA YAQN    +A+ LF+ + LEG +   + + SV+ +C+ L  +S  K IH  I    
Sbjct: 365 MIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSP 424

Query: 393 L--SDLVILNAIVDVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNGLANEALE 448
           L    L++LNA++ +YGKCGN++ +R VFES+   ++ VV+WT+MI +Y  NG+  EA+E
Sbjct: 425 LFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIE 484

Query: 449 LFYLMN-EANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDM 506
           LF  M  +   E + +T +S LSA S L  L++  E         G    G     LVD+
Sbjct: 485 LFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDL 544

Query: 507 YARCGALDIANKVFNCVQTK----DLILWTSMINANGLHG---RGKVAIDLFYKMEAESF 559
             R G L  A K+   ++ K    D++ W + ++A  ++G   R + A     ++E E+ 
Sbjct: 545 LGRAGRLGEAEKLL--LRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENV 602

Query: 560 A 560
           A
Sbjct: 603 A 603


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/562 (37%), Positives = 343/562 (61%), Gaps = 4/562 (0%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L +G+ +HA+ IK  ++    +   L+  Y KC C+    +V  +M  ++ +SWT +I+ 
Sbjct: 68  LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SD 395
           Y+Q     +AL +F  +       +     +VL +C     +   K+IHG I++    S 
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH 187

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           + + ++++D+Y K G I  +R +FE +  +DVVS T++I+ Y   GL  EALE+F+ ++ 
Sbjct: 188 IFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS 247

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
             +  + +T  S L+A S L++L  GK+ +  ++R+       + +SL+DMY++CG L  
Sbjct: 248 EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSY 307

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACS 574
           A ++F+ +  +  I W +M+     HG G+  ++LF  M  E    PD +T LA+L  CS
Sbjct: 308 ARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367

Query: 575 HSGLINEGKKFLEIMRC-DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           H  + + G    + M   +Y   P  EHY C+VD+LGRA  ++EA++F++ M  +PTA V
Sbjct: 368 HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGV 427

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
             +LLGACRVH + ++GE V ++L+E++P N GNYV++SN++A++ +W DV  VR  M  
Sbjct: 428 LGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQ 487

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
             + K PG SWI+    +H F A D++H   +E+  K+ EI+ K+ ++ GYV     VL+
Sbjct: 488 KAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKM-KQAGYVPDLSCVLY 546

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +V+EE+K +ML GHSE+LA+ +G++ + EG  IR+ KNLR+CVDCH+F K+ S++F RE+
Sbjct: 547 DVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREV 606

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
            +RD NRFH    G+CSCGDYW
Sbjct: 607 SLRDKNRFHQIVDGICSCGDYW 628



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 201/406 (49%), Gaps = 30/406 (7%)

Query: 35  SNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF 94
           SNG   R+ E    M +LG  +    +  ++ AC   + L  G ++H  ++K  Y    +
Sbjct: 32  SNG---RLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATY 88

Query: 95  IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV 154
           +   L+  Y KC     AR++ D M EK +VV W ++IS YS +G   EAL +F EM R 
Sbjct: 89  LRTRLLIFYGKCDCLEDARKVLDEMPEK-NVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147

Query: 155 GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEA 214
               N +TF   L +C  +S   LG +IH   VK   +  ++V ++L+ MYA+ G++ EA
Sbjct: 148 DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEA 207

Query: 215 AGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
             +   L  +D VS  +++ G+ Q  L  +A++ F  L   G  P+ V   + ++A   L
Sbjct: 208 REIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGL 267

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
             L +GK+ H + +++       + N+L+DMY+KC  ++Y  R+F  M  +  ISW  ++
Sbjct: 268 ALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAML 327

Query: 335 AGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
            GY+++    + LELFR ++ E  +  D + + +VL  CS           HG +   GL
Sbjct: 328 VGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS-----------HGRMEDTGL 376

Query: 394 SDLVILNA--------------IVDVYGKCGNIDYSRNVFESIESK 425
           +    + A              IVD+ G+ G ID +    + + SK
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 154/297 (51%), Gaps = 8/297 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           YGKC  + DA ++ D++ ++ V +W AM+  Y   G     L  ++ M       + FTF
Sbjct: 97  YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ +C     L  G +IHGL++K  YDS  F+ +SL+ MYAK    ++AR++F+ + E
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + DVV   +II+ Y+  G   EAL +F  +   G+  N  T+ + L A    +    G +
Sbjct: 217 R-DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
            H   ++        + N+LI MY++CG ++ A  +   +  + ++SWN+ML G+ ++ L
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335

Query: 242 YCKAMQFFRELQGAGQ-KPDQVCTVNAVS--ASGRLG----NLLNGKELHAYAIKQG 291
             + ++ FR ++   + KPD V  +  +S  + GR+     N+ +G     Y  K G
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPG 392



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 4/238 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + +A ++F+ + +R V +  A++  Y   G     LE + R+   G+S +  T
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT 256

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++ A + L  LD G + H  VL+        + NSL+ MY+KC +   AR+LFD M 
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
           E+   + WN+++  YS  G   E L LFR M+    V  +A T +A L  C     E  G
Sbjct: 317 ER-TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTG 375

Query: 180 MEIHAATV--KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
           + I    V  + G          ++ M  R G++ EA   + ++ +K +      L G
Sbjct: 376 LNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLG 433



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 9/260 (3%)

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEAL-ELFYLMNEANVESDSITLVSALSAASSLSI 477
           F S  +  V+     IS    NG   EAL E+  L  E         L + L   +    
Sbjct: 12  FSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRA---- 67

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L+ G+ ++  +I+  +     + + L+  Y +C  L+ A KV + +  K+++ WT+MI+ 
Sbjct: 68  LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
               G    A+ +F +M      P+  TF  +L +C  +  +  GK+   ++   +  D 
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI-VKWNYDS 186

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
                + L+D+  +A  ++EA +    +           + G  ++  ++E  E+  +  
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH 246

Query: 658 LELDPGNPGNYVLISNVFAA 677
            E   G   NYV  +++  A
Sbjct: 247 SE---GMSPNYVTYASLLTA 263


>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Brachypodium distachyon]
          Length = 851

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 249/801 (31%), Positives = 408/801 (50%), Gaps = 73/801 (9%)

Query: 77  GAKIHGLVLKCGYDSTDFIVN-SLVAMYAKCYDFRKARQLFDRMGEKE---DVVLWNSII 132
             ++H L ++ G+ + +  V  +L  + A+      +R+L +   E E   D VLWN  +
Sbjct: 82  APQLHSLAVRAGHATREPRVACALSDLLARLGRGPSSRRLLEEADESEGGKDAVLWNKQV 141

Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ- 191
           +  + +G+  EA+G FREMQ  G+  + Y     L AC  ++    G  +HA  +K+G  
Sbjct: 142 AMLAEAGEWDEAIGAFREMQARGVAADGYALARVLHACGRAAARREGKAVHAHALKAGLV 201

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENK------DSV------------------ 227
           +    V   L  MYA    +  A  VL +          D+V                  
Sbjct: 202 DAHPLVPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWDAVVACCVRLGLVDDAMELAG 261

Query: 228 ------------SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
                       +WN++L+G  ++    +A+   R +   G  PD     + + +    G
Sbjct: 262 RMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPDATTVSSLLKSVANAG 321

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            + +G E+H + ++ G V D   G  L+DMYAKC  ++   RVF  +  ++  +W +++A
Sbjct: 322 MVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRLDCARRVFDTLEHRNLATWNSLVA 381

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           G+A       ALEL   ++   LD +V     +               I GY +  GLS 
Sbjct: 382 GHAYAGQFEAALELVERMKRNRLDPNVTTWNGL---------------ITGYSL-NGLSS 425

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
             +L                R +  +  + +VVSWTS+IS   HNG   ++   F  M +
Sbjct: 426 QAML--------------LLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQK 471

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
             V+   +T++  L A + L++LKKGKEL+ F +R+ ++ +  V ++L+DMY++ G+L  
Sbjct: 472 DGVQPSLVTMLVLLRACAGLALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKAGSLTS 531

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A ++F  +Q K+L+   +M+    +HG+   AI LF+ +      PD ITF ALL AC  
Sbjct: 532 AKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLTACRS 591

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
            GLI EG ++ + M   Y + P  E+YAC+VDLL R+ +L+EA   +    ++P A +W 
Sbjct: 592 MGLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYLDEAMALIERSPVDPGASLWG 651

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL  C +H N +L E+ A+ L  L+P N  NY++I +++   + + + + ++  M+  G
Sbjct: 652 ALLTGCSIHGNLDLAEVAARNLFRLEPYNSANYLMIMSLYEHEQMYDEADSLKYAMKARG 711

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           +   PG SWI+I   IH F      H E+ EI ++L  +  +++   GYV  T  V++NV
Sbjct: 712 VNTRPGWSWIQIEQGIHVFEVDGSPHPETAEICEELMSLVRQIKMT-GYVPDTSCVVYNV 770

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSL-IRITKNLRVCVDCHSFCKLVSRLFGRELV 814
            EEEK ++L  H+E+LAI YG++ S    + +R+ KN R+C DCH   K +S L GR+++
Sbjct: 771 PEEEKEKLLLCHTEKLAITYGLIHSDASRMPVRVIKNTRMCSDCHEVAKHISALCGRQII 830

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RDA RFHHF  G CSC DYW
Sbjct: 831 LRDAVRFHHFVDGNCSCNDYW 851



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 222/503 (44%), Gaps = 83/503 (16%)

Query: 4   KCGSVLDAEQLFDKVS----QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           + G V DA +L  +++    + T+ TWNA+L     +G     L    RM   G+  DA 
Sbjct: 249 RLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPDAT 308

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   ++K+ A    +  G ++H   L+ G     +   +LV MYAKC     AR++FD +
Sbjct: 309 TVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRLDCARRVFDTL 368

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E  ++  WNS+++ ++ +GQ   AL L   M+R  L  N  T+                
Sbjct: 369 -EHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTW---------------- 411

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE----NKDSVSWNSMLTG 235
                              N LI  Y+  G  ++A  +L Q++      + VSW S+++G
Sbjct: 412 -------------------NGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISG 452

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
              N  Y  +  FF+E+Q  G +P  V  +  + A   L  L  GKELH +A+++ +  D
Sbjct: 453 SCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGLALLKKGKELHCFALRRAYDCD 512

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + +G  L+DMY+K   +    R+F ++  ++ +    ++ G A +    +A+ LF  +  
Sbjct: 513 MVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWR 572

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQ----------------TKEIHGYII----RKGLSD 395
            GL  D +   ++L AC  +  +++                T E +  ++    R G  D
Sbjct: 573 SGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYLD 632

Query: 396 ---LVILNAIVD----VYGKC-------GNIDY----SRNVFESIESKDVVSWTSMISSY 437
               +I  + VD    ++G         GN+D     +RN+F  +E  +  ++  ++S Y
Sbjct: 633 EAMALIERSPVDPGASLWGALLTGCSIHGNLDLAEVAARNLFR-LEPYNSANYLMIMSLY 691

Query: 438 VHNGLANEALELFYLMNEANVES 460
            H  + +EA  L Y M    V +
Sbjct: 692 EHEQMYDEADSLKYAMKARGVNT 714



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/428 (21%), Positives = 187/428 (43%), Gaps = 52/428 (12%)

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS-DLQIGNTLMDMYAKCCCVNYMGRV 318
           D+  T +++ A+ RL       +LH+ A++ G  + + ++   L D+ A+        R+
Sbjct: 67  DEEDTGSSLRAARRLA-----PQLHSLAVRAGHATREPRVACALSDLLARLGRGPSSRRL 121

Query: 319 FYQMT----AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
             +       +D + W   +A  A+     +A+  FR +Q  G+ AD   +  VL AC  
Sbjct: 122 LEEADESEGGKDAVLWNKQVAMLAEAGEWDEAIGAFREMQARGVAADGYALARVLHACGR 181

Query: 375 LKCMSQTKEIHGYIIRKGLSDL----------------------------------VILN 400
                + K +H + ++ GL D                                   V  +
Sbjct: 182 AAARREGKAVHAHALKAGLVDAHPLVPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWD 241

Query: 401 AIVDVYGKCGNIDYSRNVFESI----ESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           A+V    + G +D +  +   +        + +W +++S    +G   EAL +   M E 
Sbjct: 242 AVVACCVRLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQ 301

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +  D+ T+ S L + ++  +++ G E++ F +R G   +    ++LVDMYA+CG LD A
Sbjct: 302 GLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRLDCA 361

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            +VF+ ++ ++L  W S++  +   G+ + A++L  +M+     P+  T+  L+   S +
Sbjct: 362 RRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNGLITGYSLN 421

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ---IEPTAEV 633
           GL ++    L  ++    L P    +  L+         E+++ F + MQ   ++P+   
Sbjct: 422 GLSSQAMLLLRQIKA-AGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVT 480

Query: 634 WCALLGAC 641
              LL AC
Sbjct: 481 MLVLLRAC 488



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 140/309 (45%), Gaps = 33/309 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A ++FD +  R + TWN+++  +   G+    LE   RM+   +  +  T
Sbjct: 351 MYAKCGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTT 410

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +                   +GL+   GY        +++ +          RQ+    G
Sbjct: 411 W-------------------NGLI--TGYSLNGLSSQAMLLL----------RQI-KAAG 438

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              +VV W S+IS    +G+  ++   F+EMQ+ G+  +  T +  L+AC   +    G 
Sbjct: 439 LTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGLALLKKGK 498

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   ++   +  + V  ALI MY++ G +T A  +  +++NK+ V  N+MLTG   + 
Sbjct: 499 ELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHG 558

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIG 299
              +A+  F +L  +G KPD +     ++A   +G +  G E       K G V   +  
Sbjct: 559 QSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENY 618

Query: 300 NTLMDMYAK 308
             ++D+ A+
Sbjct: 619 ACMVDLLAR 627



 Score = 43.5 bits (101), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 5/154 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K GS+  A+++F ++  + +   NAML     +G+    +  +  +   G+  D+ T
Sbjct: 522 MYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSIT 581

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC  +  +  G +    +  K G   T      +V + A+     +A  L +R 
Sbjct: 582 FTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYLDEAMALIERS 641

Query: 120 GEKEDVVLWNSIISAYSASGQC----LEALGLFR 149
                  LW ++++  S  G      + A  LFR
Sbjct: 642 PVDPGASLWGALLTGCSIHGNLDLAEVAARNLFR 675


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 258/790 (32%), Positives = 439/790 (55%), Gaps = 39/790 (4%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC---YDFRKARQLFDRMG 120
           ++++CA L  +   A +H  + +   +++ F+ N L+A Y +         AR L D M 
Sbjct: 8   LLRSCAALPHV---AAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAAR-LLDEM- 62

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + + V +N +I AYS +G    +L  F   +    V + +T+ AAL AC  +     G 
Sbjct: 63  PRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGK 122

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  V  G    ++++N++ +MYARCG+M EA  V    E +D VSWN++L+G+V+  
Sbjct: 123 AVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAG 182

Query: 241 LYCKAMQFFREL--QGAGQKPDQVCTV-------NAVSASGRLGNLLNGKELHAYAIKQG 291
              + ++ F  +   G G     + ++       ++ +A+G +G     + +H   +K G
Sbjct: 183 AREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAG 242

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN---NCHLKALE 348
             +DL + + ++DMYAK   +     +F  +   + I    +IAG+ +    +   +AL 
Sbjct: 243 LDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALG 302

Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYG 407
           L+  +Q  G+        S+L AC+        K+IHG +++     D+ I +A++D+Y 
Sbjct: 303 LYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYS 362

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
             G ++     F S+  +DVV WTS+IS  V N L  EAL LF       +  D   + S
Sbjct: 363 GSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSS 422

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            ++A +SL++ + G+++    ++ GFN   ++ +S + M AR G +D A + F  ++++D
Sbjct: 423 VMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRD 482

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           ++ W+++I+++  HG  + A+ +F +M +A+   P+ ITFL++L ACSH GL++EG ++ 
Sbjct: 483 VVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYY 542

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
            IM  +Y L P  +H  C+VDLLGRA  L +A  F+R       A VW +LL +CR+H +
Sbjct: 543 GIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGD 602

Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            E G++VA K+++L+P +  +YV++ N++  + +     + R  M+  G+KK PG SWIE
Sbjct: 603 MERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIE 662

Query: 707 IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
           + + +HSF+A DKSH ES  IY+K+AE+  K+                +   E  Q L G
Sbjct: 663 LSSGVHSFVAGDKSHPESKAIYRKVAEMVSKVA--------------GISSRE--QDLAG 706

Query: 767 -HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
            HSE+LA+A+G++   + + IR+ KNLRVC DCHS  +L+S+   RE+++RDA RFH F 
Sbjct: 707 CHSEKLAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMELISKSERREIILRDAIRFHRFR 766

Query: 826 AGVCSCGDYW 835
            G CSCG YW
Sbjct: 767 DGSCSCGGYW 776



 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 168/575 (29%), Positives = 301/575 (52%), Gaps = 22/575 (3%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G+ L A +L D++ +R   ++N ++ AY   G P   L T++R R     VD FT+   +
Sbjct: 50  GAPLHAARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAAL 109

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
            AC+   D+  G  +H +V+  G  +  F+ NS+ +MYA+C +  +AR++FD   E++DV
Sbjct: 110 AACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDV 169

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE---------DSSFE 176
             WN+++S Y  +G   E L +F  M R GL  N++   + ++ C          D    
Sbjct: 170 S-WNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGG 228

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            +   +H   VK+G +  +++A+A+I MYA+ G +T A  +   + + + +  N+M+ GF
Sbjct: 229 RIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGF 288

Query: 237 VQN---DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            +    D+  +A+  + ELQ  G +P +    + + A    G    GK++H   +K  F 
Sbjct: 289 CREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQ 348

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            D+ IG+ L+D+Y+   C+    R F  +  QD + WT++I+G  QN    +AL LF+  
Sbjct: 349 GDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQES 408

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNI 412
              GL  DV  + SV+ AC+ L      ++I    ++ G +    + N+ + +  + G++
Sbjct: 409 VRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDV 468

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV-ESDSITLVSALSA 471
           D +   F+ +ES+DVVSW+++ISS+ H+G A +AL +F  M +A V   + IT +S L+A
Sbjct: 469 DAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTA 528

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSV--ASSLVDMYARCGAL-DIANKVFNCVQTKDL 528
            S   ++ +G    G I+   + L  ++   + +VD+  R G L D    + +     D 
Sbjct: 529 CSHGGLVDEGLRYYG-IMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDA 587

Query: 529 ILWTSMINANGLHG---RGKVAIDLFYKMEAESFA 560
           ++W S++ +  +HG   RG++  D    +E  S A
Sbjct: 588 VVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSA 622



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 250/517 (48%), Gaps = 49/517 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG + +A ++FD   +R   +WNA+L  YV  G     LE +S M   G+  ++F 
Sbjct: 146 MYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFA 205

Query: 61  FPCVIKACAMLKDL----DCGA-----KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
              +IK CA         D G       +HG V+K G D+  F+ ++++ MYAK      
Sbjct: 206 LGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTN 265

Query: 112 ARQLFDRMGEKEDVVLWNSIISAY---SASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
           A  LF  + +  +V++ N++I+ +    A+    EALGL+ E+Q  G+  + ++F + L+
Sbjct: 266 AVALFKSVPDP-NVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILR 324

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           AC  +     G +IH   +K      VY+ +ALI +Y+  G M +       L  +D V 
Sbjct: 325 ACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVI 384

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           W S+++G VQN+L+ +A++ F+E    G +PD     + ++A   L     G+++   A+
Sbjct: 385 WTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAV 444

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
           K GF     +GN+ + M A+   V+   R F +M ++D +SW+ +I+ +A + C   AL 
Sbjct: 445 KSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALC 504

Query: 349 LFRTVQLEGLDADV-----MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN--- 400
           +F     E LDA V     +   S+L ACS           HG ++ +GL    I+N   
Sbjct: 505 VFN----EMLDAKVAPPNEITFLSILTACS-----------HGGLVDEGLRYYGIMNDEY 549

Query: 401 ----------AIVDVYGKCGNI-DYSRNVFESIESKDVVSWTSMISS-YVHNGLANEALE 448
                      +VD+ G+ G + D    + +S    D V W S+++S  +H  +    L 
Sbjct: 550 GLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLV 609

Query: 449 LFYLMN-EANVESDSITLVSALSAASSLSILKKGKEL 484
              +M+ E    +  + L +    A  LS   K ++L
Sbjct: 610 ADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDL 646


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/703 (32%), Positives = 384/703 (54%), Gaps = 50/703 (7%)

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H    K G    +  AN L+ +Y +   +  A  +  ++ +K++ +W  +++GF +   
Sbjct: 54  LHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAG 113

Query: 242 YCK-AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
             +     FRE+Q  G  P+Q    + +    R  N+  GK +HA+ ++ G   D+ + N
Sbjct: 114 SSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLEN 173

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV------- 353
           +++D+Y KC    Y    F  M  +D +SW  +I  Y +     K+LE+FR         
Sbjct: 174 SILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVS 233

Query: 354 -------------------QL-----EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
                              QL      G +   +     L+  S L  +   +++HG ++
Sbjct: 234 WNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVL 293

Query: 390 RKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI---------------ESK-DVVSWTS 432
             GL SD  I +++V++YGKCG +D +  + + +               E K  +VSW+S
Sbjct: 294 TFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSS 353

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           M+S YV NG   + ++ F  M    +  D  T+ + +SA ++  IL+ GK+++ +I + G
Sbjct: 354 MVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIG 413

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
             ++  V SSL+DMY++ G+LD A  +F  ++  +++LWTSMI+   LHG+GK AI LF 
Sbjct: 414 LRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFE 473

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
            M      P+ +TF+ +L ACSH GLI EG ++  +M+  Y ++P  EHY  +V+L GRA
Sbjct: 474 GMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRA 533

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
            HL EA  F+    I     VW + L +CR+H N  +G+ V++ LL+  P +P  Y+L+S
Sbjct: 534 GHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLS 593

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           N+ +++ +W +   VR  M   G+KK PG SW+++ ++IHSF   D+SH +  EIY  L 
Sbjct: 594 NMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLD 653

Query: 733 EITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNL 792
            +  +L +E GY    + V+ +VEEE+   ++  HSE+LA+ + ++ ++  + IRI KNL
Sbjct: 654 SLIGRL-KEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNL 712

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           R+C DCH+F K  S+L  RE++VRD +RFHHF+   CSCG+YW
Sbjct: 713 RICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 135/550 (24%), Positives = 250/550 (45%), Gaps = 57/550 (10%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS-AS 138
           +HG   K G        N L+ +Y K  +   A +LFD +  K +   W  +IS ++ A+
Sbjct: 54  LHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK-NTQTWTILISGFARAA 112

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G       LFREMQ  G   N YT  + L+ C   +    G  IHA  +++G    V + 
Sbjct: 113 GSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLE 172

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA--- 255
           N+++ +Y +C +   A      +  KD VSWN M+  +++     K+++ FR        
Sbjct: 173 NSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVV 232

Query: 256 ----------------------------GQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
                                       G +   V    A+     L  +  G++LH   
Sbjct: 233 SWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRV 292

Query: 288 IKQGFVSDLQIGNTLMDMYAKC------------CCVNYMGRVFYQMTAQD----FISWT 331
           +  G  SD  I ++L++MY KC              +N++ +  + +T ++     +SW+
Sbjct: 293 LTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWS 352

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
           ++++GY  N  +   ++ FR++  E +  D+  + +++ AC+    +   K+IH YI + 
Sbjct: 353 SMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKI 412

Query: 392 GLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           GL  D  + ++++D+Y K G++D +  +FE I+  +VV WTSMIS    +G   EA+ LF
Sbjct: 413 GLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLF 472

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYAR 509
             M    +  + +T V  L+A S + ++++G +           N E    +S+V++Y R
Sbjct: 473 EGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGR 532

Query: 510 CGAL-DIANKVFNCVQTKDLILWTSMINANGLH---GRGKVAIDLFYKMEAESFAPDHIT 565
            G L +  N +F    +    +W S +++  LH     GK   ++   +++    PD   
Sbjct: 533 AGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEML--LQSAPSDPDAYI 590

Query: 566 FLALLYACSH 575
            L+ + + +H
Sbjct: 591 LLSNMCSSNH 600



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 222/492 (45%), Gaps = 62/492 (12%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYV-SNGEPLRVLETYSRMRVLGISVDAF 59
           +Y K  ++  A +LFD+++ +   TW  ++  +  + G    V   +  M+  G   + +
Sbjct: 76  LYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQY 135

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V+K C+   ++  G  IH  +L+ G      + NS++ +Y KC +F  A   F+ M
Sbjct: 136 TLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELM 195

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV----------GLVTNAY-------- 161
            EK DVV WN +I AY   G   ++L +FR               GL+   Y        
Sbjct: 196 IEK-DVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQL 254

Query: 162 -------------TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
                        TF  AL      S   +G ++H   +  G N   Y+ ++L+ MY +C
Sbjct: 255 YCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKC 314

Query: 209 GKMTEAAGVLYQLE----------------NKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
           G+M +A+ +L  +                     VSW+SM++G+V N  Y   M+ FR +
Sbjct: 315 GRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSM 374

Query: 253 QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCV 312
                  D       +SA    G L  GK++HAY  K G   D  +G++L+DMY+K   +
Sbjct: 375 VCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSL 434

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
           +    +F Q+   + + WT++I+G A +    +A+ LF  +   G+  + +    VL AC
Sbjct: 435 DDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNAC 494

Query: 373 SGLKCMSQTKEIHGYIIRKGLSDLVILN-------AIVDVYGKCGNIDYSRN-VFESIES 424
           S +  + +     G    + + D   +N       ++V++YG+ G++  ++N +FE+  S
Sbjct: 495 SHVGLIEE-----GCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSIS 549

Query: 425 KDVVSWTSMISS 436
                W S +SS
Sbjct: 550 HFTSVWRSFLSS 561



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 215/437 (49%), Gaps = 55/437 (12%)

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +  Q C+   + ++  +G+  + + LH +  K+G +  L   N L+ +Y K   +++  +
Sbjct: 31  RSRQPCSF--LHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHK 88

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLK-ALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           +F ++T ++  +WT +I+G+A+     +    LFR +Q +G   +   + SVL  CS   
Sbjct: 89  LFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSREN 148

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
            +   K IH +I+R G+  D+V+ N+I+D+Y KC   +Y+ + FE +  KDVVSW  MI 
Sbjct: 149 NIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIG 208

Query: 436 SYVHNGLANEALELF-------------------------------YLMNEANVESDSIT 464
           +Y+  G   ++LE+F                               Y M     E   +T
Sbjct: 209 AYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVT 268

Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF---- 520
              AL   SSLS+++ G++L+G ++  G N +G + SSLV+MY +CG +D A+ +     
Sbjct: 269 FSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVP 328

Query: 521 -----------NCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
                       C + K  ++ W+SM++    +G+ +  +  F  M  E    D  T   
Sbjct: 329 LNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVAT 388

Query: 569 LLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI 627
           ++ AC+++G++  GK+    I +   ++D +    + L+D+  ++  L++A      ++ 
Sbjct: 389 IISACANAGILEFGKQIHAYIQKIGLRIDAYVG--SSLIDMYSKSGSLDDALMIFEQIK- 445

Query: 628 EPTAEVWCALLGACRVH 644
           EP   +W +++  C +H
Sbjct: 446 EPNVVLWTSMISGCALH 462


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/699 (35%), Positives = 377/699 (53%), Gaps = 75/699 (10%)

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG-QNLQVYVANALIA 203
           L L R  +R  L+T              SSF TL   + + T +    N  V  +N LIA
Sbjct: 4   LRLLRRKKRSPLLT--------------SSFVTLSKYVSSHTHQHEFNNNNVIASNKLIA 49

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
            Y RCG +  A  V   ++ K +V+WNS+L  F +   +    ++ R+L     +P+ V 
Sbjct: 50  SYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGH---FEYARQLFEKIPQPNTVS 106

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIK--QGF-----VSDLQIGNTLMDMYAKCCCVNYMG 316
                       N++     H   +   +GF     + D+   NT++   A+   +    
Sbjct: 107 Y-----------NIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEAR 155

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           R+F  M  ++ +SW+ +++GY               V    LDA V             +
Sbjct: 156 RLFSAMPEKNCVSWSAMVSGY---------------VACGDLDAAV-------------E 187

Query: 377 CMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           C               +  ++   A++  Y K G ++ +  +F+ +  + +V+W +MI+ 
Sbjct: 188 CFYAAP----------MRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAG 237

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           YV NG A + L LF  M E  V+ ++++L S L   S+LS L+ GK+++  + +   + +
Sbjct: 238 YVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSD 297

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
            +  +SLV MY++CG L  A ++F  +  KD++ W +MI+    HG GK A+ LF +M+ 
Sbjct: 298 TTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKK 357

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
           E   PD ITF+A+L AC+H+GL++ G ++   MR D+ ++  PEHYAC+VDLLGRA  L 
Sbjct: 358 EGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLS 417

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EA   ++SM  +P   ++  LLGACR+H N  L E  AK LLELDP     YV ++NV+A
Sbjct: 418 EAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYA 477

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           A  +W  V  +R  M+ + + K PG SWIEI + +H F + D+ H E   I++KL ++ +
Sbjct: 478 AQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEK 537

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           K+ +  GYV   +FVLH+V EE K Q+L  HSE+LAIA+G+LK   G  IR+ KNLRVC 
Sbjct: 538 KM-KLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCG 596

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCHS  K +S + GRE++VRD  RFHHF+ G CSC DYW
Sbjct: 597 DCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 189/424 (44%), Gaps = 53/424 (12%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLE-ALGLFREMQRVG 155
           N L+A Y +C D   A ++F+ M  K  V  WNSI++A++      E A  LF ++ +  
Sbjct: 45  NKLIASYVRCGDIDSAVRVFEDMKVKSTVT-WNSILAAFAKKPGHFEYARQLFEKIPQPN 103

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
            V+  Y  + A        +  LG+        S     V   N +I+  A+ G M EA 
Sbjct: 104 TVS--YNIMLACH------WHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEAR 155

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            +   +  K+ VSW++M++G+V                         C           G
Sbjct: 156 RLFSAMPEKNCVSWSAMVSGYV------------------------AC-----------G 180

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +L    E    A  +  ++       ++  Y K   V    R+F +M+ +  ++W  +IA
Sbjct: 181 DLDAAVECFYAAPMRSVIT----WTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIA 236

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-S 394
           GY +N      L LFRT+   G+  + + + SVL+ CS L  +   K++H  + +  L S
Sbjct: 237 GYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSS 296

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           D     ++V +Y KCG++  +  +F  I  KDVV W +MIS Y  +G   +AL LF  M 
Sbjct: 297 DTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMK 356

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGA 512
           +  ++ D IT V+ L A +   ++  G +     +R+ F +E      + +VD+  R G 
Sbjct: 357 KEGLKPDWITFVAVLLACNHAGLVDLGVQYFN-TMRRDFGIETKPEHYACMVDLLGRAGK 415

Query: 513 LDIA 516
           L  A
Sbjct: 416 LSEA 419



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 126/236 (53%), Gaps = 4/236 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G V  AE+LF ++S RT+ TWNAM+  YV NG     L  +  M   G+  +A + 
Sbjct: 207 YMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSL 266

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+  C+ L  L  G ++H LV KC   S      SLV+MY+KC D + A +LF ++  
Sbjct: 267 TSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPR 326

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DVV WN++IS Y+  G   +AL LF EM++ GL  +  TFVA L AC  +    LG++
Sbjct: 327 K-DVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ 385

Query: 182 IHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
            +  T++    ++    +   ++ +  R GK++EA  ++  +  K   +    L G
Sbjct: 386 -YFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLG 440



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 15/271 (5%)

Query: 8   VLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKA 67
           V DA   FD +  + V +WN M+ A    G        +S M       +  ++  ++  
Sbjct: 120 VHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMP----EKNCVSWSAMVSG 175

Query: 68  CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAM---YAKCYDFRKARQLFDRMGEKED 124
                DLD         ++C Y +    V +  AM   Y K      A +LF  M  +  
Sbjct: 176 YVACGDLDAA-------VECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRT- 227

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           +V WN++I+ Y  +G+  + L LFR M   G+  NA +  + L  C + S   LG ++H 
Sbjct: 228 LVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQ 287

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
              K   +       +L++MY++CG + +A  +  Q+  KD V WN+M++G+ Q+    K
Sbjct: 288 LVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKK 347

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
           A++ F E++  G KPD +  V  + A    G
Sbjct: 348 ALRLFDEMKKEGLKPDWITFVAVLLACNHAG 378



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + DA +LF ++ ++ V  WNAM+  Y  +G   + L  +  M+  G+  D  T
Sbjct: 307 MYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWIT 366

Query: 61  FPCVIKACAMLKDLDCGAK 79
           F  V+ AC     +D G +
Sbjct: 367 FVAVLLACNHAGLVDLGVQ 385


>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
 gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
          Length = 941

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/686 (32%), Positives = 389/686 (56%), Gaps = 16/686 (2%)

Query: 1   MYGKCGSVLD-AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MYGKC    D A ++F ++S+ +V +W+A + AY   G+    ++T+  M + G+  +A 
Sbjct: 256 MYGKCSRHPDEAREVFLRISRPSVISWSAFIAAY---GQHWEAIKTFELMNLEGVKPNAT 312

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V++ACA +   + G +IH LVL   Y     ++N+  ++YAKC     A ++F  +
Sbjct: 313 TLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSI 372

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE--- 176
             K D V WN+I+SAY+  G   +A+ L R+MQ  G V +  TF+  L +C  S+     
Sbjct: 373 PCK-DAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQY 431

Query: 177 ------TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
                 T G ++H+  + +G +   Y+ N L+ MY RCG + +A      +  ++  SW 
Sbjct: 432 GNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWT 491

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
            +++  VQN    + ++  + +   G + +++  ++ + A    G+L  GK +H     +
Sbjct: 492 ILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTK 551

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G  SD+   N L++MY  C  ++    VF +M  +D +SWT II+ YA     L+AL+L+
Sbjct: 552 GLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLY 611

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKC 409
           R ++ E    D + + SVL AC+ L+ + + K IH  I+  G+ +D+ +  A+V  YGKC
Sbjct: 612 RRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKC 671

Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
             ++ +R VF+ I  KD+V W +MI +Y  N    +A  L+  M E  +  + +TL++ L
Sbjct: 672 EAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLL 731

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC-GALDIANKVFNCVQTKDL 528
            + SS   +++G  L+     +G+    SV ++L++MYA+C G L+ A   F  V +K++
Sbjct: 732 DSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNV 791

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
           + W+S++ A   +G    A +LF+ M  +   P+ +TF ++L+ACSH+GL +EG  +   
Sbjct: 792 VSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLS 851

Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           M+ D+ L+P PEHY C+V+LL ++  +++A  F+ +M ++P A  W +LLGAC VH++KE
Sbjct: 852 MQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKE 911

Query: 649 LGEIVAKKLLELDPGNPGNYVLISNV 674
            G + AK+LL+ +P N   YVL+ N+
Sbjct: 912 YGALAAKQLLDAEPRNSAAYVLLYNI 937



 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 194/654 (29%), Positives = 331/654 (50%), Gaps = 23/654 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGSV +A   FD++ +R + +WNAM+  Y  +    + ++ Y+  R+ G   D  T
Sbjct: 54  MYGKCGSVEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVT 113

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++ AC    DL  G  +H   L   + S   + N L++MY+ C     A  +F+   
Sbjct: 114 FASLLNACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFE-WS 172

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL-- 178
            + DV  W ++I+AY+  G+   A   + +M + GL +N  TF+  L  C  SS E L  
Sbjct: 173 FRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTC--SSLEVLET 230

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMT-EAAGVLYQLENKDSVSWNSMLTGFV 237
           G  +H   + SG +  + + N+LI+MY +C +   EA  V  ++     +SW++ +  + 
Sbjct: 231 GKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYG 290

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           Q   + +A++ F  +   G KP+     + + A   +G    G+ +HA  +   +  +  
Sbjct: 291 Q---HWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTT 347

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N    +YAKC  V    RVF  +  +D +SW  I++ YA+      A+ L R +Q+EG
Sbjct: 348 VLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEG 407

Query: 358 LDADVMIIGSVLMACS---------GLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYG 407
              D +   ++L +CS           K ++  +++H  +I  GL  D  + N +V +YG
Sbjct: 408 FVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYG 467

Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
           +CG++D +R  F+ I  ++V SWT +IS  V NG A+E LEL   M+    E++ IT +S
Sbjct: 468 RCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFIS 527

Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
            L A S    L  GK ++  I  KG   +   +++L++MY  C +LD A  VF  +  +D
Sbjct: 528 LLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRD 587

Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
           ++ WT +I+A    G    A+ L+ +ME E   PD +T +++L AC+    + EGK   E
Sbjct: 588 VVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHE 647

Query: 588 -IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            I+    + D +      +V   G+   +E+A Q    + ++     W A++GA
Sbjct: 648 RIVASGVETDVFVG--TAVVSFYGKCEAVEDARQVFDRI-LDKDIVCWNAMIGA 698



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 183/696 (26%), Positives = 327/696 (46%), Gaps = 25/696 (3%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD 108
           M + G+  D  T    + ACA L D   G +IH  +L  G  ++  + NSLV MY KC  
Sbjct: 1   MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQ 168
             +AR  FDRM E+ D++ WN++I+ Y+      +A+ L+   +  G   +  TF + L 
Sbjct: 61  VEEARNAFDRMPER-DLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLN 119

Query: 169 ACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
           AC  S     G  +H   + +       V N LI+MY+ CG + +A  V       D  +
Sbjct: 120 ACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCT 179

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
           W +++  + ++     A   + ++   G + +++  +  +     L  L  GK +H  A+
Sbjct: 180 WTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLAL 239

Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGR-VFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
             G    L++ N+L+ MY KC       R VF +++    ISW+  IA Y Q   H +A+
Sbjct: 240 GSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQ---HWEAI 296

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVY 406
           + F  + LEG+  +   + SVL AC+ +    Q + IH  ++    + +  +LNA   +Y
Sbjct: 297 KTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLY 356

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            KC  +  +  VF SI  KD VSW +++S+Y   GL  +A+ L   M       D IT +
Sbjct: 357 AKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFI 416

Query: 467 SALSAASSLSILKK---------GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           + L + S  ++LK+         G++++  +I  G + +  + + LV MY RCG+LD A 
Sbjct: 417 TILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDAR 476

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
             F  +  +++  WT +I+    +G     ++L   M+ E    + ITF++LL ACS +G
Sbjct: 477 AAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTG 536

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
            ++ GK   E +R    L+        L+++      L+EA      M        W  +
Sbjct: 537 DLSLGKTIHERIRTK-GLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVS-WTII 594

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS--NVFAASRKWKDVEQVRMRMRGSG 695
           + A   H+   L  +   + +E +   P    LIS     A+ R   + + +  R+  SG
Sbjct: 595 ISA-YAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASG 653

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
           ++       + +G  + SF  + ++  ++ +++ ++
Sbjct: 654 VETD-----VFVGTAVVSFYGKCEAVEDARQVFDRI 684


>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
 gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
          Length = 673

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/691 (34%), Positives = 393/691 (56%), Gaps = 26/691 (3%)

Query: 151 MQRVGLVTNAYTFVAALQACEDS---SFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           M+  G   NA  F   L+AC  S   S  +   EI    V +G +  V VA ALI+  AR
Sbjct: 1   MELDGCRPNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALAR 60

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
           CG +  A     ++  K+ VSWNSM+    ++  + +A++ +R ++  G KP  +  ++A
Sbjct: 61  CGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHA 120

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           + +   L +L  GK +H      GF + + +GN L++MY+KC  ++     F ++ ++D 
Sbjct: 121 LCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDV 180

Query: 328 ISWTTIIAGYAQNNCHLKALELFRT-VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
           +SW ++IA ++Q     +ALE +R  +  E L+   + +   L A   L+    TK +  
Sbjct: 181 VSWNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQE 240

Query: 387 YIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
             IR GL  DL++ +A+V   GKCG +D +R VF+ +E ++VVSW+ +I++   +G   +
Sbjct: 241 DAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRD 300

Query: 446 ALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVD 505
           A+ELF+ M+   ++ + +TL+S L A +S   + +G+  +  +   GF  E +VA++LV+
Sbjct: 301 AIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVN 360

Query: 506 MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHIT 565
           MY +CG L  A  VF+ +  ++++ WT+M+     HG  + A  +F  M  E   P+ IT
Sbjct: 361 MYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVIT 420

Query: 566 FLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
           F+++L+ CSH+G++++G +   IM  D+ + P  EHY C++DLLGRA  LEEA + +R+M
Sbjct: 421 FVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTM 480

Query: 626 QIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD-PGNPGNYVLISNVFAASRKWKDV 684
            +EP    W +LLGAC+VHS+ +  + +AK   +L  P     YVL+SN++    +  D 
Sbjct: 481 PVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLSNMYTDEEQQSDP 540

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLE-REGG 743
           E+ +             SS IE+  ++H F+A D SH   +EI  +L  + E++    G 
Sbjct: 541 EEDQC------------SSLIEVKGRVHEFVAGDWSHPRIEEIVAELQRLQEEMMILRGS 588

Query: 744 YVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
            + +      +V+E E       HS +LAIA+GVL S +GS I +    R+CV+CH   K
Sbjct: 589 SLCEEGGQEGSVQENE-------HSLKLAIAFGVLASLQGSSINVVNTRRICVECHDAAK 641

Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           ++S++ GR++VVRD+ RFHH E GVCSCGDY
Sbjct: 642 VISKIAGRKIVVRDSYRFHHIEQGVCSCGDY 672



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/579 (27%), Positives = 290/579 (50%), Gaps = 37/579 (6%)

Query: 49  MRVLGISVDAFTFPCVIKACAMLK---DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK 105
           M + G   +A  F  +++ACA      D    A+I   V+  G+D+   +  +L++  A+
Sbjct: 1   MELDGCRPNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALAR 60

Query: 106 CYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVA 165
           C D   AR+ FDR+  K +VV WNS+I+A +  G    AL ++R M+  G+  +  +++ 
Sbjct: 61  CGDLEGAREAFDRIPAK-NVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIH 119

Query: 166 ALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKD 225
           AL +C        G  IH      G + QV+V NAL+ MY++C ++  A     ++++KD
Sbjct: 120 ALCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKD 179

Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELH 284
            VSWNSM+    Q     +A++ +R + G  + +P ++  V+A+ A+  L +  + K L 
Sbjct: 180 VVSWNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQ 239

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
             AI+ G   DL +G+ L+    KC C++    VF +M  ++ +SW+ +IA  A++    
Sbjct: 240 EDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGR 299

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIV 403
            A+ELF  + L+G+  + + + SVL AC+    +++ +  H  +   G  ++  + NA+V
Sbjct: 300 DAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALV 359

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
           ++YGKCG++  +R VF+++  ++VVSWT+M++ Y H+G   EA  +F  M    ++ + I
Sbjct: 360 NMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVI 419

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNC 522
           T VS L   S   ++  G E    ++   G          ++D+  R G L+ A ++   
Sbjct: 420 TFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRT 479

Query: 523 VQTK-DLILWTSMINANGLHGR-------GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +  + D   W S++ A  +H          K+A DL     A  FA      L+ +Y   
Sbjct: 480 MPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDL-----ALPFASAPYVLLSNMYTDE 534

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
                            + Q DP  +  + L+++ GR +
Sbjct: 535 -----------------EQQSDPEEDQCSSLIEVKGRVH 556



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 225/452 (49%), Gaps = 35/452 (7%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           +CG +  A + FD++  + V +WN+M+ A   +G   R LE Y RM   G+     ++  
Sbjct: 60  RCGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIH 119

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
            + +C+ L+DL+ G  IH  V   G+D+  F+ N+LV MY+KC     AR+ F+R+  K 
Sbjct: 120 ALCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSK- 178

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVG---LVTNAYTFVAALQACEDSSFETLGM 180
           DVV WNS+I+A+S  G   EAL  +R M  +G   L     T V AL A    S  + G 
Sbjct: 179 DVVSWNSMIAAHSQLGGSDEALETYRRM--IGEERLEPTKITLVHALGAA--LSLRSAGD 234

Query: 181 E--IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
              +    ++ G    + V +AL++   +CG + +A  V  ++E ++ VSW+ ++    +
Sbjct: 235 TKLLQEDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAE 294

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +     A++ F  +   G +P++V  ++ + A    G +  G+  HA     GF ++  +
Sbjct: 295 HGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNV 354

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L++MY KC  +     VF  MT ++ +SWT ++AGYA +    +A  +F+ + LEG+
Sbjct: 355 ANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGI 414

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-------------NAIVDV 405
             +V+   SVL  CS           H  ++  GL    I+               ++D+
Sbjct: 415 QPNVITFVSVLFNCS-----------HAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDL 463

Query: 406 YGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
            G+ G ++ +  +  ++    D  +W S++ +
Sbjct: 464 LGRAGWLEEAEELLRTMPVEPDKAAWNSLLGA 495



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 161/350 (46%), Gaps = 16/350 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG---ISVD 57
           MY KC  +  A + F+++  + V +WN+M+ A+   G     LETY RM  +G   +   
Sbjct: 158 MYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRM--IGEERLEPT 215

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
             T    + A   L+       +    ++ G +    + ++LV+   KC    +AR +FD
Sbjct: 216 KITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFD 275

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           RM E+ +VV W+ +I+A +  G+  +A+ LF  M   G+  N  T ++ L+AC  +    
Sbjct: 276 RM-ERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIA 334

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G   HA     G   +  VANAL+ MY +CG +  A  V   +  ++ VSW +ML G+ 
Sbjct: 335 EGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYA 394

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQGFVSDL 296
            +    +A + F+ +   G +P+ +  V+ +      G + +G ++ H      G V   
Sbjct: 395 HHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIV--- 451

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
                + + Y   C ++ +GR  +   A++ +    +    A  N  L A
Sbjct: 452 ----PVTEHYG--CVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGA 495


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/569 (37%), Positives = 339/569 (59%), Gaps = 3/569 (0%)

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           ++A  +  NL   + +H++  +     D  + N+L+ MY KC  V+    VF  +  +D 
Sbjct: 69  ITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDV 128

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SWT +I GYAQN+   +AL L   +             S L A          +++H  
Sbjct: 129 VSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHAL 188

Query: 388 IIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            ++  L  D+ + +A++D+Y +C  +D +  VF+ ++SK+ VSW ++I+ +   G     
Sbjct: 189 AVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETT 248

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L  F  M      +   T  S  SA + +  L++G+ ++  +I+ G  L   VA++++ M
Sbjct: 249 LMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGM 308

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           YA+ G++  A KVF+ V  +DL+ W +M+ A   +G GK A+  F ++       + ITF
Sbjct: 309 YAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITF 368

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           L++L ACSH GL+ EGK++ ++M+ DY ++P  +HY   VDLLGRA  L+EA  FV  M 
Sbjct: 369 LSVLTACSHGGLVKEGKQYFDMMK-DYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMP 427

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           +EPTA VW ALLGACR+H N ++G+  A  + ELDP + G  VL+ N++A++ +W D  +
Sbjct: 428 MEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAAR 487

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR  M+ +G+KK P  SW+EI N +H F+A D +H +S+EIY+   E+  ++ ++ GYV 
Sbjct: 488 VRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRI-KKAGYVP 546

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
            T +VL +++E+E+   L  HSE++A+A+ ++    G+ IRI KN+R+C DCHS  + VS
Sbjct: 547 NTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVS 606

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +F RE+VVRD NRFHHF  G CSCGDYW
Sbjct: 607 EVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 177/354 (50%), Gaps = 8/354 (2%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +I ACA  K+L     IH  + +       F++NSL+ MY KC     AR +FD + 
Sbjct: 65  YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV W  +I+ Y+ +    EALGL  +M R     + +TF + L+A        +G 
Sbjct: 125 TR-DVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGE 183

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  VK   +  VYV +AL+ MYARC +M  A  V   L++K+ VSWN+++ GF +  
Sbjct: 184 QMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKG 243

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                +  F E+Q  G         +  SA  R+G L  G+ +HA+ IK G      + N
Sbjct: 244 DGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVAN 303

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           T++ MYAK   +    +VF ++  +D ++W T++  +AQ     +A+  F  ++  G+  
Sbjct: 304 TILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQL 363

Query: 361 DVMIIGSVLMACSGLKCMSQTKE----IHGYIIRKGLSDLVILNAIVDVYGKCG 410
           + +   SVL ACS    + + K+    +  Y +   +   V   + VD+ G+ G
Sbjct: 364 NQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYV---SFVDLLGRAG 414



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 142/282 (50%), Gaps = 1/282 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG+V DA  +FD +  R V +W  ++  Y  N  P   L     M         FT
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFT 165

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   +KA         G ++H L +K   D   ++ ++L+ MYA+C     A ++FD + 
Sbjct: 166 FTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD 225

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +V  WN++I+ ++  G     L  F EMQR G     +T+ +   A         G 
Sbjct: 226 SKNEVS-WNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGR 284

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KSGQ L  +VAN ++ MYA+ G M +A  V  +++ +D V+WN+MLT F Q  
Sbjct: 285 WVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYG 344

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           L  +A+  F E++  G + +Q+  ++ ++A    G +  GK+
Sbjct: 345 LGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQ 386



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 130/241 (53%), Gaps = 4/241 (1%)

Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAI 402
           L+ L+L  T +L        +  S++ AC+  K ++  + IH ++ R  L+ D  +LN++
Sbjct: 47  LRELDLLLTGELA---PTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSL 103

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           + +Y KCG +  +R+VF+ I ++DVVSWT +I+ Y  N +  EAL L   M  A      
Sbjct: 104 IHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSG 163

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
            T  S L AA +      G++++   ++   + +  V S+L+DMYARC  +D+A +VF+ 
Sbjct: 164 FTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDW 223

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           + +K+ + W ++I      G G+  +  F +M+   F   H T+ ++  A +  G + +G
Sbjct: 224 LDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQG 283

Query: 583 K 583
           +
Sbjct: 284 R 284



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 16/270 (5%)

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           S ++A +    L   + ++  + R     +G + +SL+ MY +CGA+  A  VF+ + T+
Sbjct: 67  SIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTR 126

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           D++ WT +I     +     A+ L   M    F P   TF + L A    G    G++ +
Sbjct: 127 DVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQ-M 185

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV-WCALLGACRVHS 645
             +   Y LD      + L+D+  R   ++ A +      ++   EV W AL+      +
Sbjct: 186 HALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFD--WLDSKNEVSWNALIAG---FA 240

Query: 646 NKELGEIVAKKLLELDPGNPG-NYVLISNVFAASRKWKDVEQ---VRMRMRGSGLKKTPG 701
            K  GE    K  E+     G  +   S+VF+A  +   +EQ   V   M  SG K T  
Sbjct: 241 RKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLT-- 298

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
                + N I    A+  S  ++ +++ ++
Sbjct: 299 ---AFVANTILGMYAKSGSMVDARKVFDRV 325


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/614 (37%), Positives = 351/614 (57%), Gaps = 10/614 (1%)

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQG----AGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           V W+     F      C+A++  R+L      +G   D+    + + A   LG+L   +E
Sbjct: 100 VLWSDAARLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARE 159

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           L     ++  +S     N L   Y K   +    ++F +M  ++  +W  ++AG      
Sbjct: 160 LFERIPRRNVMS----WNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGF 215

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNA 401
             ++L  F  ++ EG+  D   +GSV   C+GL+ +   +++H Y++R GL  D+ + ++
Sbjct: 216 DEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSS 275

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           +  +Y +CG +     V   + S  +VS  ++I+    NG +  ALE F +M    V +D
Sbjct: 276 LAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAAD 335

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
            +T VSA+S+ S L+ L +G++++G +++ G +    V + LV MY+RCG L  + +VF 
Sbjct: 336 VVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFF 395

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
                D  L ++MI+A G HG G+ AI+LF +M      P  +TFLALLYACSHSGL  E
Sbjct: 396 GYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEE 455

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G    E+M   Y + P  +HY C+VDLLGR+  L+EA   + SM + P   +W  LL AC
Sbjct: 456 GMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSAC 515

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           +   N ++ E +AK+++ELDP +  +YVL+SN+ A SR+W DV +VR  MR + ++K PG
Sbjct: 516 KTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPG 575

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            SW+E+   IH F   D+SH    EI + L E+  K+ R+ GY      VLH++E+EEK 
Sbjct: 576 VSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKI-RQCGYSPDMSMVLHDMEDEEKE 634

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             L  HSE+LAIA+  L   EG  IR+ KNLRVC DCH   KL+S++ GRE+VVRD +RF
Sbjct: 635 VSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRF 694

Query: 822 HHFEAGVCSCGDYW 835
           HHF+ G CSC DYW
Sbjct: 695 HHFKDGRCSCRDYW 708



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 192/407 (47%), Gaps = 20/407 (4%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN 97
            PLR L  ++     G + D FT   ++ A A L DL    ++   + +    S     N
Sbjct: 120 RPLRQLHAFAATS--GAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSW----N 173

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
            L   Y K  D   AR+LFD M E+ +V  WN++++  +  G   E+LG F +M+R G+ 
Sbjct: 174 ILFGGYIKNGDLGGARKLFDEMPER-NVATWNAMVAGLTNLGFDEESLGFFLDMRREGMH 232

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            + +   +  + C        G ++HA  V+SG +  + V ++L  MY RCG + E   V
Sbjct: 233 PDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAV 292

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
           L  L +   VS N+++ G  QN     A+++F  ++  G   D V  V+A+S+   L  L
Sbjct: 293 LRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAAL 352

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+++H   +K G    + +   L+ MY++C C+    RVF+     D    + +I+ Y
Sbjct: 353 AQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAY 412

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIR 390
             +    KA+ELF+ +   G +   +   ++L ACS       G+ C     + +G    
Sbjct: 413 GFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGM--- 469

Query: 391 KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
                +     +VD+ G+ G +D +  +  S+  + D V W +++S+
Sbjct: 470 --QPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 177/375 (47%), Gaps = 4/375 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +  A +LFD++ +R V TWNAM+    + G     L  +  MR  G+  D F  
Sbjct: 179 YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGL 238

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V + CA L+D+  G ++H  V++ G D    + +SL  MY +C   ++   +  RM  
Sbjct: 239 GSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL-RMLP 297

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
              +V  N+II+  + +G    AL  F  M+ VG+  +  TFV+A+ +C D +    G +
Sbjct: 298 SLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQ 357

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   +K+G +  V V   L+ MY+RCG + ++  V +     D+   ++M++ +  +  
Sbjct: 358 IHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGH 417

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGN 300
             KA++ F+++   G +P  V  +  + A    G    G +      K  G    ++   
Sbjct: 418 GQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYT 477

Query: 301 TLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAG-YAQNNCHLKALELFRTVQLEGL 358
            ++D+  +  C++    +   M    D + W T+++    Q N  +      R ++L+  
Sbjct: 478 CVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPH 537

Query: 359 DADVMIIGSVLMACS 373
           D+   ++ S + A S
Sbjct: 538 DSASYVLLSNIRATS 552



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 5/237 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG + + E +   +   ++ + N ++     NG+    LE +  MR +G++ D  T
Sbjct: 279 MYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVT 338

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA-RQLFDRM 119
           F   I +C+ L  L  G +IHG V+K G D    ++  LV MY++C     + R  F   
Sbjct: 339 FVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYC 398

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           G   D  L +++ISAY   G   +A+ LF++M   G   +  TF+A L AC  S  +  G
Sbjct: 399 G--SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEG 456

Query: 180 MEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
           M+      K+ G    V     ++ +  R G + EA  ++  +    D V W ++L+
Sbjct: 457 MDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLS 513


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/683 (34%), Positives = 383/683 (56%), Gaps = 7/683 (1%)

Query: 53  GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA 112
           G+ +D  TFP V+K C+   D+  G ++HG+V K G+D+  ++ N+L+ +Y  C     A
Sbjct: 5   GVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDA 64

Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGL-FREMQRVGLVTNAYTFVAALQACE 171
           R+LFD M E+ DVV WN+II   S +G   EA    F  + R  +  N  + ++ L    
Sbjct: 65  RRLFDEMPER-DVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISA 123

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
               E +   IH  +VK G + QV   NAL+  Y +CG +     V  +   K+ VSWNS
Sbjct: 124 ALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNS 183

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++ G         A+  FR +  AG +P+ V   + +     L     GKE+H ++++ G
Sbjct: 184 IINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMG 243

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
             +D+ I N+L+DMYAK         +F+ +  ++ +SW  +IA YA N   L+A+    
Sbjct: 244 TETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVI 303

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
            +Q  G   + +   +VL AC+ L  +   KEIH   +R GL SDL + N+++D+Y KCG
Sbjct: 304 QMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCG 363

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
            +  +RNVF +   KD VS+  +I  Y       ++L LF  M     + D ++ V  +S
Sbjct: 364 CLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVIS 422

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
           A ++L+ LK+GKE++G  +R        V++SL+D Y +CG +DIA ++FN +  KD+  
Sbjct: 423 ACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVAS 482

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W +MI   G+ G  + AI +F  M  ++   D ++++A+L ACSH GL+  G ++   M 
Sbjct: 483 WNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML 542

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
              +L+P   HY C+VDLLGRA  +EEA + ++ + I P A +W ALLGACR++ N ELG
Sbjct: 543 AQ-RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELG 601

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
              A+ L EL P + G Y+L+SN++A + +W +  ++R  M+  G KK PG SW++I ++
Sbjct: 602 RRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQ 661

Query: 711 IHSFIARDKSHSESDEIYKKLAE 733
           +H+F+A ++   E  E+   LAE
Sbjct: 662 VHAFVAEER--VEGFELGDWLAE 682



 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 186/597 (31%), Positives = 317/597 (53%), Gaps = 14/597 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           +YG CG + DA +LFD++ +R V +WN ++G    NG+       Y  M +   I  +  
Sbjct: 54  LYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLV 113

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +   ++   A L+D +   +IH   +K G DS     N+LV  Y KC   +   Q+F+  
Sbjct: 114 SVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNET 173

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK +V  WNSII+  +  G+C +AL  FR M   G   N+ T  + L    +      G
Sbjct: 174 VEKNEVS-WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAG 232

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            EIH  +++ G    +++AN+LI MYA+ G  TEA+ + + L+ ++ VSWN+M+  +  N
Sbjct: 233 KEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALN 292

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L  +A++F  ++Q  G+ P+ V   N + A  RLG L  GKE+HA  ++ G  SDL + 
Sbjct: 293 RLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVS 352

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L+DMYAKC C+ +  R  +  + +D +S+  +I GY++ +  L++L LF  ++L G  
Sbjct: 353 NSLIDMYAKCGCL-HSARNVFNTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKK 411

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            DV+    V+ AC+ L  + Q KE+HG  +R  L S L + N+++D Y KCG ID +  +
Sbjct: 412 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRL 471

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  I  KDV SW +MI  Y   G    A+ +F  M +  V+ D ++ ++ LSA S   ++
Sbjct: 472 FNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLV 531

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINA 537
           ++G +    ++ +         + +VD+  R G ++ A K+   +    D  +W +++ A
Sbjct: 532 ERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGA 591

Query: 538 NGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYAC-SHSGLINEGKKFLEIMR 590
             ++G    G+ A +  ++++     P H  +  LL    + +G  +E  K  E+M+
Sbjct: 592 CRIYGNVELGRRAAEHLFELK-----PQHCGYYILLSNIYAETGRWDEANKIRELMK 643



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 227/436 (52%), Gaps = 3/436 (0%)

Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
           M R G+  + +TF   L+ C DS     GME+H    K G +  VYV N L+ +Y  CG 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ-FFRELQGAGQKPDQVCTVNAVS 269
           + +A  +  ++  +D VSWN+++     N  Y +A   +F  +  +  KP+ V  ++ + 
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
            S  L +    + +H Y++K G  S +   N L+D Y KC  V  + +VF +   ++ +S
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W +II G A       AL  FR +   G   + + I S+L     L+C    KEIHG+ +
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240

Query: 390 RKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALE 448
           R G  +D+ I N+++D+Y K G+   +  +F +++ +++VSW +MI++Y  N L  EA+ 
Sbjct: 241 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR 300

Query: 449 LFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA 508
               M E     +++T  + L A + L  L  GKE++   +R G   +  V++SL+DMYA
Sbjct: 301 FVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYA 360

Query: 509 RCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLA 568
           +CG L  A  VFN    KD + +  +I           +++LF +M      PD ++F+ 
Sbjct: 361 KCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVG 419

Query: 569 LLYACSHSGLINEGKK 584
           ++ AC++   + +GK+
Sbjct: 420 VISACANLAALKQGKE 435


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/560 (38%), Positives = 339/560 (60%), Gaps = 2/560 (0%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G+ +H +           + N L+DMY KC  +    RVF  M  ++  SWT ++AG
Sbjct: 57  LEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAG 116

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SD 395
           + Q+   ++A++LF  +  EG   D + +   + +C   K +SQ +EIH      G+ SD
Sbjct: 117 FVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSD 176

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           LV  NAI+++YGKCG+I  +  VF  +  K+V+SW++MI+++  N LA+EAL  F LM +
Sbjct: 177 LVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQ 236

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
             +E D IT VS L A +S+  L+ GK L+  I+  G +    V ++LV+MY +CG+ D 
Sbjct: 237 EGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDD 296

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A  VF+ +  K+++ W +M+ A G +GR + A+ LF  M+ E   P+ ITF+ +LY CSH
Sbjct: 297 ARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSH 356

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           SG   +       MR D+ + P   H+ CL+D+LGR+  LEEA + +++M +   A +W 
Sbjct: 357 SGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWT 416

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           +LL AC  H +++     A++  + +P     Y+++SN++AA +KW +  +VR RM  +G
Sbjct: 417 SLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAG 476

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           ++K  G SWIEI  ++H F+A D  H +   I+K L  +  ++ R  GY    + V+H++
Sbjct: 477 VRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEM-RIKGYEPDRKVVIHSM 535

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           EEEEK ++L+ HSE+LA+A+G+  +   + + I KNLRVC DCHS  K +S + GR + V
Sbjct: 536 EEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITV 595

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD+NRFHHF+ G CSCGDYW
Sbjct: 596 RDSNRFHHFDRGECSCGDYW 615



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 201/383 (52%), Gaps = 14/383 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +I+ CA  K L+ G +IH  +     D   F+ N LV MY KC    +A+++FD M  K 
Sbjct: 47  LIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHK- 105

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           +V  W  +++ +  SG+ +EA+ LF  M + G + +    +  + +C  +   + G EIH
Sbjct: 106 NVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIH 165

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           +A    G +  +  ANA+I MY +CG + EA  V  ++  K+ +SW++M+  F QN+L  
Sbjct: 166 SAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELAD 225

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           +A+ FF+ +Q  G + D++  V+ + A   +G L  GK LH   +  G  + + +GNTL+
Sbjct: 226 EALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLV 285

Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           +MY KC   +    VF  M  ++ +SW  ++A Y QN    +AL LF ++ LEG+  + +
Sbjct: 286 NMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDI 345

Query: 364 IIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
              ++L  CS        +    + ++  G   R+     V    ++D+ G+ G ++ + 
Sbjct: 346 TFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPRE-----VHFGCLIDMLGRSGKLEEAE 400

Query: 417 NVFESIE-SKDVVSWTSMISSYV 438
            + +++    D V WTS++ + V
Sbjct: 401 ELIQAMPVPADAVLWTSLLCACV 423



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 170/341 (49%), Gaps = 13/341 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+++A+++FD +  + VF+W  ++  +V +G  +  ++ + RM   G   D   
Sbjct: 85  MYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVA 144

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I +C   K L  G +IH     CG DS     N+++ MY KC    +A  +F RM 
Sbjct: 145 LLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMP 204

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK +V+ W+++I+A+  +    EAL  F+ MQ+ G+  +  T+V+ L A        LG 
Sbjct: 205 EK-NVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGK 263

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   V +G +  + V N L+ MY +CG   +A  V   +  K+ VSWN+ML  + QN 
Sbjct: 264 ALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNG 323

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAV---SASGRLGNLLNGKELHAYAIKQGF---VS 294
              +A+  F  +   G +P+ +  V  +   S SG+  + ++    H   ++Q F     
Sbjct: 324 RSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVS----HFVEMRQDFGITPR 379

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII 334
           ++  G  L+DM  +   +     +   M    D + WT+++
Sbjct: 380 EVHFG-CLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLL 419



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 77/155 (49%)

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
           T  +S  +  G  +   E   L+ ++     +  L   +   +    L++G+ ++ ++  
Sbjct: 10  TKWLSPVLECGGVDAIREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDS 69

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
              +    +++ LVDMY +CG+L  A +VF+ +Q K++  WT ++      GRG  AI L
Sbjct: 70  GTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQL 129

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           F++M  E   PD +  L  + +C  +  +++G++ 
Sbjct: 130 FHRMCQEGELPDRVALLKFIDSCGAAKALSQGREI 164


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/743 (32%), Positives = 399/743 (53%), Gaps = 17/743 (2%)

Query: 102 MYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAY 161
           MY +C     AR+ FD M  + +VV W+++I+AY+  G   +AL LF  M   G+  NA 
Sbjct: 1   MYNRCGSVIHARRAFDAMVVR-NVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAI 59

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQ 220
           TFV+ L AC       LG  IH   V  G     V + N ++ MY +CG++  A  V  +
Sbjct: 60  TFVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFER 119

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +E K++V+WN+M+    ++D Y +A     E+   G +P+++  V+ + A   + ++  G
Sbjct: 120 MEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRG 179

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           + +H     +G  SD  + N L+++Y KC  +         +  +D ISWTT++A YA++
Sbjct: 180 RIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARH 239

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVIL 399
               +A+ + + +  EG+  D     ++L +C  +  ++  +EIH  +   G+  D V+ 
Sbjct: 240 GHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQ 299

Query: 400 NAIVDVYGKCGNIDYSRNVFESIES-KDVVSWTSMISSYVHNGLANEALELFYLMNEANV 458
            A+VD+YGKCGN D +R  F+ +   +DV  W +++++YV      E L +F  M+   V
Sbjct: 300 TALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGV 359

Query: 459 ESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS------SLVDMYARCGA 512
             D++T +S L A +SL+ L  G+  +  ++ +G     +VAS      S+++MYA+CG+
Sbjct: 360 APDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGS 419

Query: 513 LDIANKVF---NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
           L  A   F      +  D++ W++M+ A    G  + A+  FY M+ E   PD ++F++ 
Sbjct: 420 LADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSA 479

Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
           +  CSHSGL+ E   F   +R D+ + P   H+ACLVDLL RA  + EA   +R   +  
Sbjct: 480 IAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGA 539

Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
               W  LL ACR + + E    VA +L  L  G+   Y L+++VF  SRKW DV   R 
Sbjct: 540 HHSTWMTLLSACRTYGDLERARRVAARLASLRSGSA--YSLLASVFCLSRKWDDVRNARQ 597

Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIA-RDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
            +   G    PG SWIEI N+++ F A  D+     +EI+ +L  +  ++ R+ GY    
Sbjct: 598 SLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEI-RKAGYERDP 656

Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
              +H+  E+EK  +L  HSE++A+ +G++ + EG+ +RI KN+ VC DCH   K +S +
Sbjct: 657 IKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVKNIGVCQDCHEVIKCISEV 716

Query: 809 FGRELVVRDANRFHHFEAGVCSC 831
             R + +RD   FH F  G CSC
Sbjct: 717 ADRVITLRDDRSFHQFSHGSCSC 739



 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 160/527 (30%), Positives = 268/527 (50%), Gaps = 20/527 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGSV+ A + FD +  R V +W+AM+ AY   G P   LE + RM   G+  +A T
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ ACA L  +  G  IH  ++  G    D I+ N++V MY KC +   AR++F+RM
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E ++ V WN++I+A S   +  EA  L  EM   GL  N  T V+ + AC      + G
Sbjct: 121 -EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRG 179

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H      G      VANAL+ +Y +CGK+  A   L  +E +D +SW ++L  + ++
Sbjct: 180 RIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARH 239

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+   + +   G K D    VN + +   +  L  G+E+H    + G   D  + 
Sbjct: 240 GHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQ 299

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             L+DMY KC   +   R F +M   +D   W  ++A Y   +   + L +F  + L+G+
Sbjct: 300 TALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGV 359

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-------VILNAIVDVYGKCGN 411
             D +   S+L AC+ L  +   +  H  ++ +GL D        ++  +++++Y KCG+
Sbjct: 360 APDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGS 419

Query: 412 IDYSRNVF---ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
           +  ++  F       + DVV+W++M+++Y   GL+ EAL  FY M +  V+ DS++ VSA
Sbjct: 420 LADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSA 479

Query: 469 LSAASSLSILKKGKELNGFI--IRKGFNLEGSVA--SSLVDMYARCG 511
           ++  S   ++   +E   F   +R    +  + A  + LVD+ +R G
Sbjct: 480 IAGCSHSGLV---REAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAG 523


>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/784 (31%), Positives = 410/784 (52%), Gaps = 48/784 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVS-NGEPLRVLETYSRMRVLG-ISVDA 58
           +Y K G++    +LF ++ QR    WN +L            V+  +  M ++     ++
Sbjct: 83  LYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNS 142

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC-YDFRKARQLFD 117
            T   V+  CA L++ D G  +H  V+K G +S     N+L++MYAKC      A   F+
Sbjct: 143 VTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFN 201

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC---EDSS 174
           R+ E +DVV WN++I+ +S +    EA  LF  M +  +  N  T  + L  C   E+++
Sbjct: 202 RI-EFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENA 260

Query: 175 FETLGMEIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
               G E+H   ++  + ++ V V N+L++ Y R G+M +A  +   ++++D VSWN+++
Sbjct: 261 GYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAII 320

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-G 291
            G+  N  + KA++ F E       KPD V  V+ + A   + NL   K +H Y I+  G
Sbjct: 321 AGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPG 380

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
              D  +GN L+  YAKC       + F  ++ +D ISW  I+  + ++ C    + L  
Sbjct: 381 LREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLH 440

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL----SDLVILNAIVDVYG 407
            +  EG+  D + I +++   + +  + + KE H Y IR GL    +   + N ++D Y 
Sbjct: 441 WMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYA 500

Query: 408 KCGNIDYSRNVFESIESK--------------------------------DVVSWTSMIS 435
           KCGN+ Y+ N+F S+  K                                D+ +W  M+ 
Sbjct: 501 KCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVR 560

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  N   ++AL LF+ +    ++ D +T++S L A + ++ +   ++ +G++IR  FN 
Sbjct: 561 VYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFN- 619

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  +  + +DMY++CG++  A K+F     KDL+++T+M+    +HG G+ A+ +F  M 
Sbjct: 620 DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYML 679

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
                PDH+   A+L+ACSH+GL++EG K    +   +   P  E YAC+VDLL R   +
Sbjct: 680 ELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRI 739

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           ++AY FV  M IE  A +W  LLGACR H   ELG +VA  L +++  N GNYV++SN++
Sbjct: 740 KDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLY 799

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           AA  +W  V ++R  MR   LKK  G SWIE+G + + FIA D SH +   IY+ L+ + 
Sbjct: 800 AADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLSTLD 859

Query: 736 EKLE 739
           + ++
Sbjct: 860 QLMK 863



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 183/679 (26%), Positives = 317/679 (46%), Gaps = 63/679 (9%)

Query: 52  LGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
           +G   +      ++K+C  +  +  G+ +HG  LK G+ S   +   L+ +YAK      
Sbjct: 33  VGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDY 92

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSA-SGQCLEALGLFREMQRVGLV-TNAYTFVAALQA 169
             +LF  M ++ D V+WN ++S  +       E + LFR M  V     N+ T    L  
Sbjct: 93  CNKLFGEM-DQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPV 151

Query: 170 CEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM-TEAAGVLYQLENKDSVS 228
           C     E  G  +H+  +KSG        NALI+MYA+CG + ++A     ++E KD VS
Sbjct: 152 CARLR-EDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVS 210

Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL---GNLLNGKELHA 285
           WN+++ GF +N    +A + F  +     +P+     + +     L        GKE+H 
Sbjct: 211 WNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHC 270

Query: 286 YAIKQ-GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
           + +++   V D+ + N+LM  Y +   +     +F  M ++D +SW  IIAGYA N   L
Sbjct: 271 HVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWL 330

Query: 345 KALELFRT-VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGL-SDLVILNA 401
           KALELF   + LE +  D + + SVL AC+ +  +   K IHGYIIR  GL  D  + NA
Sbjct: 331 KALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNA 390

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           ++  Y KC     +   F  I  KD++SW +++ ++  +G     + L + M    +  D
Sbjct: 391 LLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPD 450

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL----VDMYARCGAL---- 513
           SIT+++ +   +++S +KK KE + + IR G  L+G    +L    +D YA+CG +    
Sbjct: 451 SITILTIIQYYAAVSRVKKVKETHSYSIRFGL-LQGDAGPTLGNGMLDAYAKCGNMKYAV 509

Query: 514 ----------------------------DIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
                                       D A  +FN +   DL  W  M+     +    
Sbjct: 510 NIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPD 569

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF--LEIMRC--DYQLDPWPEH 601
            A+ LF++++ +   PD +T +++L AC+H   ++  ++     I  C  D +L+     
Sbjct: 570 QALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFNDVRLN----- 624

Query: 602 YACLVDLLGRANHLEEAYQ-FVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
               +D+  +   +  AY+ F+ S Q +    ++ A++G   +H   E    +   +LEL
Sbjct: 625 -GAFIDMYSKCGSVFGAYKLFLSSPQKDLV--MFTAMVGGFAMHGMGEEALRIFSYMLEL 681

Query: 661 DPGNPGNYVLISNVFAASR 679
               P + ++ + +FA S 
Sbjct: 682 GV-KPDHVIITAVLFACSH 699



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 232/454 (51%), Gaps = 20/454 (4%)

Query: 134 AYSASGQCL---EALGLFREMQR--VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           A+ AS + L   EAL LF E  R  VG   N     A L++C   S    G  +H   +K
Sbjct: 8   AFCASERWLRHDEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALK 67

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY-CKAMQ 247
            G      +   L+ +YA+ G +     +  +++ +D V WN +L+G      +  + M+
Sbjct: 68  LGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMR 127

Query: 248 FFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
            FR +    + KP+ V     +    RL     GK +H+Y IK G  S    GN L+ MY
Sbjct: 128 LFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMY 186

Query: 307 AKC---CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
           AKC   C   Y    F ++  +D +SW  +IAG+++N    +A +LF  +    +  +  
Sbjct: 187 AKCGLVCSDAYAA--FNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYA 244

Query: 364 IIGSVLMACSGLK---CMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNV 418
            I S+L  C+ L+        KE+H +++R+   + D+ ++N+++  Y + G ++ +  +
Sbjct: 245 TIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFL 304

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNEANVESDSITLVSALSAASSLSI 477
           F +++S+D+VSW ++I+ Y  NG   +ALELF   ++   ++ DS+TLVS L A + +  
Sbjct: 305 FRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHN 364

Query: 478 LKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           L+  K ++G+IIR  G   + SV ++L+  YA+C     A + F  +  KDLI W ++++
Sbjct: 365 LQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILD 424

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           A    G     ++L + M  E   PD IT L ++
Sbjct: 425 AFTESGCETHLVNLLHWMLREGIRPDSITILTII 458


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/614 (37%), Positives = 351/614 (57%), Gaps = 10/614 (1%)

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQG----AGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           V W+     F      C+A++  R+L      +G   D+    + + A   LG+L   +E
Sbjct: 38  VLWSDAARLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARE 97

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           L     ++  +S     N L   Y K   +    ++F +M  ++  +W  ++AG      
Sbjct: 98  LFERIPRRNVMS----WNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGF 153

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNA 401
             ++L  F  ++ EG+  D   +GSV   C+GL+ +   +++H Y++R GL  D+ + ++
Sbjct: 154 DEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSS 213

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           +  +Y +CG +     V   + S  +VS  ++I+    NG +  ALE F +M    V +D
Sbjct: 214 LAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAAD 273

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
            +T VSA+S+ S L+ L +G++++G +++ G +    V + LV MY+RCG L  + +VF 
Sbjct: 274 VVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFF 333

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
                D  L ++MI+A G HG G+ AI+LF +M      P  +TFLALLYACSHSGL  E
Sbjct: 334 GYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEE 393

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G    E+M   Y + P  +HY C+VDLLGR+  L+EA   + SM + P   +W  LL AC
Sbjct: 394 GMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSAC 453

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           +   N ++ E +AK+++ELDP +  +YVL+SN+ A SR+W DV +VR  MR + ++K PG
Sbjct: 454 KTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPG 513

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            SW+E+   IH F   D+SH    EI + L E+  K+ R+ GY      VLH++E+EEK 
Sbjct: 514 VSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKI-RQCGYSPDMSMVLHDMEDEEKE 572

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             L  HSE+LAIA+  L   EG  IR+ KNLRVC DCH   KL+S++ GRE+VVRD +RF
Sbjct: 573 VSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRF 632

Query: 822 HHFEAGVCSCGDYW 835
           HHF+ G CSC DYW
Sbjct: 633 HHFKDGRCSCRDYW 646



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 192/407 (47%), Gaps = 20/407 (4%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN 97
            PLR L  ++     G + D FT   ++ A A L DL    ++   + +    S     N
Sbjct: 58  RPLRQLHAFAATS--GAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSW----N 111

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
            L   Y K  D   AR+LFD M E+ +V  WN++++  +  G   E+LG F +M+R G+ 
Sbjct: 112 ILFGGYIKNGDLGGARKLFDEMPER-NVATWNAMVAGLTNLGFDEESLGFFLDMRREGMH 170

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            + +   +  + C        G ++HA  V+SG +  + V ++L  MY RCG + E   V
Sbjct: 171 PDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAV 230

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
           L  L +   VS N+++ G  QN     A+++F  ++  G   D V  V+A+S+   L  L
Sbjct: 231 LRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAAL 290

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             G+++H   +K G    + +   L+ MY++C C+    RVF+     D    + +I+ Y
Sbjct: 291 AQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAY 350

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIR 390
             +    KA+ELF+ +   G +   +   ++L ACS       G+ C     + +G    
Sbjct: 351 GFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGM--- 407

Query: 391 KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
                +     +VD+ G+ G +D +  +  S+  + D V W +++S+
Sbjct: 408 --QPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 177/375 (47%), Gaps = 4/375 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +  A +LFD++ +R V TWNAM+    + G     L  +  MR  G+  D F  
Sbjct: 117 YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGL 176

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V + CA L+D+  G ++H  V++ G D    + +SL  MY +C   ++   +  RM  
Sbjct: 177 GSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL-RMLP 235

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
              +V  N+II+  + +G    AL  F  M+ VG+  +  TFV+A+ +C D +    G +
Sbjct: 236 SLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQ 295

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           IH   +K+G +  V V   L+ MY+RCG + ++  V +     D+   ++M++ +  +  
Sbjct: 296 IHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGH 355

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGN 300
             KA++ F+++   G +P  V  +  + A    G    G +      K  G    ++   
Sbjct: 356 GQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYT 415

Query: 301 TLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTII-AGYAQNNCHLKALELFRTVQLEGL 358
            ++D+  +  C++    +   M    D + W T++ A   Q N  +      R ++L+  
Sbjct: 416 CVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPH 475

Query: 359 DADVMIIGSVLMACS 373
           D+   ++ S + A S
Sbjct: 476 DSASYVLLSNIRATS 490



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 5/237 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG + + E +   +   ++ + N ++     NG+    LE +  MR +G++ D  T
Sbjct: 217 MYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVT 276

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKA-RQLFDRM 119
           F   I +C+ L  L  G +IHG V+K G D    ++  LV MY++C     + R  F   
Sbjct: 277 FVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYC 336

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           G   D  L +++ISAY   G   +A+ LF++M   G   +  TF+A L AC  S  +  G
Sbjct: 337 G--SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEG 394

Query: 180 MEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
           M+      K+ G    V     ++ +  R G + EA  ++  +    D V W ++L+
Sbjct: 395 MDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLS 451


>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/784 (31%), Positives = 410/784 (52%), Gaps = 48/784 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVS-NGEPLRVLETYSRMRVLG-ISVDA 58
           +Y K G++    +LF ++ QR    WN +L            V+  +  M ++     ++
Sbjct: 22  LYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNS 81

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC-YDFRKARQLFD 117
            T   V+  CA L++ D G  +H  V+K G +S     N+L++MYAKC      A   F+
Sbjct: 82  VTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFN 140

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC---EDSS 174
           R+ E +DVV WN++I+ +S +    EA  LF  M +  +  N  T  + L  C   E+++
Sbjct: 141 RI-EFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENA 199

Query: 175 FETLGMEIHAATVKSGQNLQ-VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
               G E+H   ++  + ++ V V N+L++ Y R G+M +A  +   ++++D VSWN+++
Sbjct: 200 GYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAII 259

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-G 291
            G+  N  + KA++ F E       KPD V  V+ + A   + NL   K +H Y I+  G
Sbjct: 260 AGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPG 319

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
              D  +GN L+  YAKC       + F  ++ +D ISW  I+  + ++ C    + L  
Sbjct: 320 LREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLH 379

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL----SDLVILNAIVDVYG 407
            +  EG+  D + I +++   + +  + + KE H Y IR GL    +   + N ++D Y 
Sbjct: 380 WMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYA 439

Query: 408 KCGNIDYSRNVFESIESK--------------------------------DVVSWTSMIS 435
           KCGN+ Y+ N+F S+  K                                D+ +W  M+ 
Sbjct: 440 KCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVR 499

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  N   ++AL LF+ +    ++ D +T++S L A + ++ +   ++ +G++IR  FN 
Sbjct: 500 VYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFN- 558

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  +  + +DMY++CG++  A K+F     KDL+++T+M+    +HG G+ A+ +F  M 
Sbjct: 559 DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYML 618

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
                PDH+   A+L+ACSH+GL++EG K    +   +   P  E YAC+VDLL R   +
Sbjct: 619 ELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRI 678

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           ++AY FV  M IE  A +W  LLGACR H   ELG +VA  L +++  N GNYV++SN++
Sbjct: 679 KDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLY 738

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           AA  +W  V ++R  MR   LKK  G SWIE+G + + FIA D SH +   IY+ L+ + 
Sbjct: 739 AADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLSTLD 798

Query: 736 EKLE 739
           + ++
Sbjct: 799 QLMK 802



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 177/643 (27%), Positives = 301/643 (46%), Gaps = 66/643 (10%)

Query: 88  GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA-SGQCLEALG 146
           GYDS   +   L+ +YAK        +LF  M ++ D V+WN ++S  +       E + 
Sbjct: 11  GYDS---LCKGLLNLYAKSGALDYCNKLFGEMDQR-DPVIWNIVLSGLAGFQSHEAEVMR 66

Query: 147 LFREMQRVGLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
           LFR M  V     N+ T    L  C     E  G  +H+  +KSG        NALI+MY
Sbjct: 67  LFRAMHMVNEAKPNSVTIAIVLPVCARLR-EDAGKSVHSYVIKSGLESHTLAGNALISMY 125

Query: 206 ARCGKM-TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           A+CG + ++A     ++E KD VSWN+++ GF +N    +A + F  +     +P+    
Sbjct: 126 AKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATI 185

Query: 265 VNAVSASGRL---GNLLNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
            + +     L        GKE+H + +++   V D+ + N+LM  Y +   +     +F 
Sbjct: 186 ASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFR 245

Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRT-VQLEGLDADVMIIGSVLMACSGLKCMS 379
            M ++D +SW  IIAGYA N   LKALELF   + LE +  D + + SVL AC+ +  + 
Sbjct: 246 NMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQ 305

Query: 380 QTKEIHGYIIR-KGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
             K IHGYIIR  GL  D  + NA++  Y KC     +   F  I  KD++SW +++ ++
Sbjct: 306 VAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAF 365

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
             +G     + L + M    +  DSIT+++ +   +++S +KK KE + + IR G  L+G
Sbjct: 366 TESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGL-LQG 424

Query: 498 SVASSL----VDMYARCGAL--------------------------------DIANKVFN 521
               +L    +D YA+CG +                                D A  +FN
Sbjct: 425 DAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFN 484

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +   DL  W  M+     +     A+ LF++++ +   PD +T +++L AC+H   ++ 
Sbjct: 485 TMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHM 544

Query: 582 GKKF--LEIMRC--DYQLDPWPEHYACLVDLLGRANHLEEAYQ-FVRSMQIEPTAEVWCA 636
            ++     I  C  D +L+         +D+  +   +  AY+ F+ S Q +    ++ A
Sbjct: 545 LRQCHGYVIRACFNDVRLN------GAFIDMYSKCGSVFGAYKLFLSSPQKDLV--MFTA 596

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASR 679
           ++G   +H   E    +   +LEL    P + ++ + +FA S 
Sbjct: 597 MVGGFAMHGMGEEALRIFSYMLELGV-KPDHVIITAVLFACSH 638



 Score = 39.3 bits (90), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA-NGLHGRGKVAID 549
           KG++   S+   L+++YA+ GALD  NK+F  +  +D ++W  +++   G        + 
Sbjct: 10  KGYD---SLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMR 66

Query: 550 LFYKMEAESFA-PDHITFLALLYACS 574
           LF  M   + A P+ +T   +L  C+
Sbjct: 67  LFRAMHMVNEAKPNSVTIAIVLPVCA 92


>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
          Length = 485

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/484 (42%), Positives = 318/484 (65%), Gaps = 1/484 (0%)

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVYGKCGN 411
            +L+ L  D + + S++ AC+ L  + + K +H Y    GL + L + NAI+D+Y KC +
Sbjct: 2   TKLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDD 61

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           I+ ++ VF  I  KDV+SWTSM+S    +G   E+L LF  M    +E D ITLV  LSA
Sbjct: 62  IESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSA 121

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
            +    L +GK ++  I +   N +  + ++LVDMYA+CG++D+A +VF  ++ +++  W
Sbjct: 122 CAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTW 181

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
            +MI    +HG G+ AI LF +ME +   PD +TF+ALL ACSH+GL++EG    + M+ 
Sbjct: 182 NAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKN 241

Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
            +Q++P  EHY C+VDLL RA  +++A  F+ +M I+  + +W  LLGACR   + +L E
Sbjct: 242 KFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAE 301

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
            + ++++EL+P + G YV++SN++A   +W    ++R +M+  G++KTPG SWIE+   I
Sbjct: 302 KIXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMI 361

Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
           H F+A D+SH ++++IY  + E+T ++  +GG+V  T  VL ++EEEEK   L+ HSE+L
Sbjct: 362 HQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKL 421

Query: 772 AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
           AIA G++ +  GS IRI KNLRVC DCHSF K+ S+++ RE+V RD +RFHHF+ G CSC
Sbjct: 422 AIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSC 481

Query: 832 GDYW 835
            D+W
Sbjct: 482 MDFW 485



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 153/287 (53%), Gaps = 11/287 (3%)

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +PD+V  V+ V A  +LGNL  GK LH+Y+ + G   +L + N ++DMY KC  +     
Sbjct: 8   RPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQE 67

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF ++  +D +SWT++++G A++    ++L LFR +QL  ++ D + +  VL AC+    
Sbjct: 68  VFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGA 127

Query: 378 MSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           + Q K IH  I +  ++ DLV+  A+VD+Y KCG+ID +  VF  +  ++V +W +MI  
Sbjct: 128 LDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGG 187

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL-----NGFIIRK 491
              +G   +A+ LF  M    +  D +T ++ L A S   ++ +G  +     N F I  
Sbjct: 188 LAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEP 247

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
                G V    VD+  R   +D A      +  K + +LW +++ A
Sbjct: 248 RMEHYGCV----VDLLCRARKVDDALAFIENMPIKANSVLWATLLGA 290



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 142/312 (45%), Gaps = 22/312 (7%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D  T   ++ ACA L +L+ G  +H    + G D    + N+++ MY KC D   A+++F
Sbjct: 10  DEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEVF 69

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           +R+ EK DV+ W S++S  + SG   E+L LFR+MQ   +  +  T V  L AC  +   
Sbjct: 70  NRIREK-DVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGAL 128

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G  IH    K   N  + +  AL+ MYA+CG +  A  V  ++  ++  +WN+M+ G 
Sbjct: 129 DQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGL 188

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             +     A+  F +++     PD V  +  + A    G +  G      A+ Q   +  
Sbjct: 189 AMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEG-----LAMFQAMKNKF 243

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAGYAQNNCHLKA 346
           QI    M+ Y   C V+ + R      A  FI           W T++ G  ++  H   
Sbjct: 244 QI-EPRMEHYG--CVVDLLCRARKVDDALAFIENMPIKANSVLWATLL-GACRSGGHFDL 299

Query: 347 LELF--RTVQLE 356
            E    R ++LE
Sbjct: 300 AEKIXRRVIELE 311



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 112/218 (51%)

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
           L  +  T V+ + AC        G  +H+ + + G +  + V NA++ MY +C  +  A 
Sbjct: 7   LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQ 66

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            V  ++  KD +SW SML+G  ++  + +++  FR++Q    +PD++  V  +SA  + G
Sbjct: 67  EVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTG 126

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
            L  GK +H    K     DL +   L+DMYAKC  ++   +VF +M  ++  +W  +I 
Sbjct: 127 ALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIG 186

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           G A +     A+ LF  ++ + L  D +   ++L ACS
Sbjct: 187 GLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACS 224



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 3/235 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  A+++F+++ ++ V +W +ML     +G     L  + +M++  I  D  T
Sbjct: 55  MYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEIT 114

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA    LD G  IH L+ K   +    +  +LV MYAKC     A Q+F RM 
Sbjct: 115 LVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR 174

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + +V  WN++I   +  G   +A+ LF +M+   L+ +  TF+A L AC  +     G+
Sbjct: 175 VR-NVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGL 233

Query: 181 EIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
            +  A     Q   ++     ++ +  R  K+ +A   +  +  K +SV W ++L
Sbjct: 234 AMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLL 288


>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/587 (36%), Positives = 359/587 (61%), Gaps = 9/587 (1%)

Query: 258 KPDQVCT--VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC--VN 313
           KP   CT  ++         ++   K+ HA  ++   + +    + L+   A      +N
Sbjct: 3   KPSSKCTKLISVDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLN 62

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
           Y  ++F QM   D     T+I GYA++    +A+ L+  +   G+  D      VL AC+
Sbjct: 63  YARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACA 122

Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L  +   +  H  +++ G  SDL ++NA++  Y  CG+   + +VF+    +DVV+W  
Sbjct: 123 RLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNI 182

Query: 433 MISSYVHNGLANEALELFYLMNEA-NVESDSITLVSALSAASSLSILKKGKELNGF---I 488
           MI+++++ GL+ +A +L   M +  N+  D +T+VS + A + L  L++GK L+ +   +
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKEL 242

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
            +   N +  + ++LVDMYA+CG++D+A +VF  ++ +++  W ++I    +HG G+ AI
Sbjct: 243 DKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAI 302

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
            LF +ME +   PD +TF+ALL ACSH+GL++EG    + M+  +Q++P  EHY C+VDL
Sbjct: 303 SLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDL 362

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
           L RA  +++A  F+ +M I+  + +W  LLGACR   + +L E + ++++EL+P + G Y
Sbjct: 363 LCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRY 422

Query: 669 VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
           V++SN++A   +W    ++R +M+  G++KTPG SWIE+   IH F+A D+SH ++++IY
Sbjct: 423 VMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIY 482

Query: 729 KKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRI 788
             + E+T ++  +GG+V  T  VL ++EEEEK   L+ HSE+LAIA G++ +  GS IRI
Sbjct: 483 AMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRI 542

Query: 789 TKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            KNLRVC DCHSF K+ S+++ RE+V RD +RFHHF+ G CSC D+W
Sbjct: 543 VKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 589



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 169/372 (45%), Gaps = 21/372 (5%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           + HA  +++        ++ LI+  A    G +  A  +  Q++N D    N+M+ G+ +
Sbjct: 29  QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYAR 88

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +    +A+  +  +   G   D       ++A  RLG +  G+  H   +K GF SDL +
Sbjct: 89  SQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFV 148

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEG 357
            N L+  Y  C        VF + T +D ++W  +I  +       KA +L     +L+ 
Sbjct: 149 INALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN 208

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS------DLVILNAIVDVYGKCGN 411
           L  D + + S++ AC+ L  + + K +H Y   K L       DLV+  A+VD+Y KCG+
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHSY--SKELDKFEINCDLVLETALVDMYAKCGS 266

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           ID +  VF  +  ++V +W ++I     +G   +A+ LF  M    +  D +T ++ L A
Sbjct: 267 IDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCA 326

Query: 472 ASSLSILKKGKEL-----NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
            S   ++ +G  +     N F I       G V    VD+  R   +D A      +  K
Sbjct: 327 CSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCV----VDLLCRARKVDDALAFIENMPIK 382

Query: 527 -DLILWTSMINA 537
            + +LW +++ A
Sbjct: 383 ANSVLWATLLGA 394



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 160/362 (44%), Gaps = 26/362 (7%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A +LF ++     F  N M+  Y  +  P   +  Y  M   G+ VD +T+P V+ ACA 
Sbjct: 64  ARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACAR 123

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L  +  G + H  VLK G+ S  F++N+L+  Y  C  F  A  +FD      DVV WN 
Sbjct: 124 LGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDE-STVRDVVTWNI 182

Query: 131 IISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           +I+A+   G   +A  L  EM ++  L  +  T V+ + AC        G  +H+ + + 
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKEL 242

Query: 190 GQ---NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAM 246
            +   N  + +  AL+ MYA+CG +  A  V  ++  ++  +WN+++ G   +     A+
Sbjct: 243 DKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAI 302

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
             F +++     PD V  +  + A    G +  G      A+ Q   +  QI    M+ Y
Sbjct: 303 SLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG-----LAMFQAMKNKFQI-EPRMEHY 356

Query: 307 AKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAGYAQNNCHLKALELF--RTVQ 354
              C V+ + R      A  FI           W T++ G  ++  H    E    R ++
Sbjct: 357 G--CVVDLLCRARKVDDALAFIENMPIKANSVLWATLL-GACRSGGHFDLAEKIGRRVIE 413

Query: 355 LE 356
           LE
Sbjct: 414 LE 415



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 7/238 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAFT 60
           Y  CGS   A  +FD+ + R V TWN M+ A+++ G   +  +    M  L  +  D  T
Sbjct: 156 YHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVT 215

Query: 61  FPCVIKACAMLKDLDCGAKIHGL---VLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
              ++ ACA L +L+ G  +H     + K   +    +  +LV MYAKC     A Q+F 
Sbjct: 216 MVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFR 275

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           RM  + +V  WN++I   +  G   +A+ LF +M+   L+ +  TF+A L AC  +    
Sbjct: 276 RMRVR-NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVD 334

Query: 178 LGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
            G+ +  A     Q   ++     ++ +  R  K+ +A   +  +  K +SV W ++L
Sbjct: 335 EGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLL 392



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 1/141 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+  A Q+F ++  R VFTWNA++G    +G     +  + +M    +  D  T
Sbjct: 260 MYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVT 319

Query: 61  FPCVIKACAMLKDLDCG-AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC+    +D G A    +  K   +        +V +  +      A    + M
Sbjct: 320 FIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENM 379

Query: 120 GEKEDVVLWNSIISAYSASGQ 140
             K + VLW +++ A  + G 
Sbjct: 380 PIKANSVLWATLLGACRSGGH 400


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/579 (37%), Positives = 351/579 (60%), Gaps = 4/579 (0%)

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +P++      ++    L  L  G+ +HA+     F  DL + N +++MYAKC  +     
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           +F +M  +D +SWT +I+GY+Q+    +AL LF  +   G   +   + S+L A      
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221

Query: 378 MSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
               +++H + ++ G   ++ + ++++D+Y +  ++  ++ +F S+ +K+VVSW ++I+ 
Sbjct: 222 DHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           +   G     + LF  M     E    T  S L+ ASS S L++GK ++  +I+ G    
Sbjct: 282 HARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGS-LEQGKWVHAHVIKSGGQPI 340

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             + ++L+DMYA+ G++  A KVF  +  +D++ W S+I+    HG G  A+ LF +M  
Sbjct: 341 AYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK 400

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
               P+ ITFL++L ACSHSGL++EG+ + E+M+  ++++    H+  +VDLLGRA  L 
Sbjct: 401 AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLN 459

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EA +F+  M I+PTA VW ALLGACR+H N +LG   A+++ ELDP + G +VL+SN++A
Sbjct: 460 EANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYA 519

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           ++ +  D  +VR  M+ SG+KK P  SW+EI N++H F+A D SH   +EI +   +I+ 
Sbjct: 520 SAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISG 579

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           K+ +E GYV  T  VL  + ++++   L  HSE+LA+A+ VLK+  G  IRI KN+R+C 
Sbjct: 580 KI-KEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICG 638

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCHS  K  SR+ GRE++VRD NRFHHF  G+CSC DYW
Sbjct: 639 DCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 227/419 (54%), Gaps = 14/419 (3%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  IHA    S     + + N ++ MYA+CG + EA  +  ++  KD VSW  +++G+ Q
Sbjct: 124 GRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQ 183

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           +    +A+  F ++   G +P++    + + ASG   +  +G++LHA+++K G+  ++ +
Sbjct: 184 SGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHV 243

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G++L+DMYA+   +     +F  + A++ +SW  +IAG+A+       + LF  +  +G 
Sbjct: 244 GSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGF 303

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRN 417
           +       SVL AC+    + Q K +H ++I+ G   +  I N ++D+Y K G+I  ++ 
Sbjct: 304 EPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKK 362

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  +  +D+VSW S+IS Y  +GL  EAL+LF  M +A V+ + IT +S L+A S   +
Sbjct: 363 VFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGL 422

Query: 478 LKKGKELNGFIIRKGFNLEGSVAS--SLVDMYARCGALDIANKVFNCVQTKDL-ILWTSM 534
           L +G+    F + K   +E  VA   ++VD+  R G L+ ANK    +  K    +W ++
Sbjct: 423 LDEGQYY--FELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGAL 480

Query: 535 INANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           + A  +H     G  A +  ++++     P H+  L+ +YA   +G +++  K  ++M+
Sbjct: 481 LGACRMHKNMDLGVYAAEQIFELDPHDSGP-HV-LLSNIYAS--AGRLSDAAKVRKMMK 535



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 204/401 (50%), Gaps = 21/401 (5%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN 97
           EP R L  YS+M               +  C  L+ L  G  IH  +    ++    ++N
Sbjct: 102 EPERTL--YSKM---------------LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLN 144

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
            ++ MYAKC    +A+ LFD+M  K D+V W  +IS YS SGQ  EAL LF +M  +G  
Sbjct: 145 FILNMYAKCGSLEEAQDLFDKMPTK-DMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            N +T  + L+A      +  G ++HA ++K G ++ V+V ++L+ MYAR   M EA  +
Sbjct: 204 PNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVI 263

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
              L  K+ VSWN+++ G  +       M+ F ++   G +P    T ++V A    G+L
Sbjct: 264 FNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHF-TYSSVLACASSGSL 322

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             GK +HA+ IK G      IGNTL+DMYAK   +    +VF ++  QD +SW +II+GY
Sbjct: 323 EQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGY 382

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV 397
           AQ+    +AL+LF  +    +  + +   SVL ACS    + + +     + +  +   V
Sbjct: 383 AQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQV 442

Query: 398 ILN-AIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
             +  +VD+ G+ G ++ +    E +  K   + W +++ +
Sbjct: 443 AHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGA 483



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 189/376 (50%), Gaps = 4/376 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A+ LFDK+  + + +W  ++  Y  +G+    L  + +M  LG   + FT
Sbjct: 149 MYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFT 208

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++KA         G ++H   LK GYD    + +SL+ MYA+    R+A+ +F+ + 
Sbjct: 209 LSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +VV WN++I+ ++  G+    + LF +M R G     +T+ + L AC  S     G 
Sbjct: 269 AK-NVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGK 326

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KSG     Y+ N LI MYA+ G + +A  V  +L  +D VSWNS+++G+ Q+ 
Sbjct: 327 WVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG 386

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A+Q F ++  A  +P+++  ++ ++A    G L  G+       K    + +    
Sbjct: 387 LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHV 446

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTII-AGYAQNNCHLKALELFRTVQLEGL 358
           T++D+  +   +N   +   +M  +   + W  ++ A     N  L      +  +L+  
Sbjct: 447 TVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPH 506

Query: 359 DADVMIIGSVLMACSG 374
           D+   ++ S + A +G
Sbjct: 507 DSGPHVLLSNIYASAG 522



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 9/283 (3%)

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           L+N  ++E +       L+  + L  LK+G+ ++  I    F  +  + + +++MYA+CG
Sbjct: 95  LINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCG 154

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
           +L+ A  +F+ + TKD++ WT +I+     G+   A+ LF KM    F P+  T  +LL 
Sbjct: 155 SLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLK 214

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           A S +G  +   + L      Y  D      + L+D+  R  H+ EA     S+  +   
Sbjct: 215 A-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 273

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLE-LDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
             W AL+     H+ K  GE V +   + L  G    +   S+V A +     +EQ +  
Sbjct: 274 S-WNALIAG---HARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASS-GSLEQGKWV 328

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
              + + K+ G     IGN +    A+  S  ++ +++++L +
Sbjct: 329 H--AHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVK 369


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/685 (33%), Positives = 384/685 (56%), Gaps = 4/685 (0%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +F  ++  C   KDL  G  IH  +L+ G  S+ ++ NSLV +YAKC    KA+ +F+ +
Sbjct: 12  SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESI 71

Query: 120 GEKEDVVLWNSIISAYSASGQCLEA--LGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
             K DVV WN +I+ YS  G    +  + LF+ M+    + N +TF     A   S    
Sbjct: 72  TNK-DVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETF 130

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
            G++ HA  +K+     V+V ++LI MY + G M +A  V   +  +++VSW ++++G+ 
Sbjct: 131 GGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYA 190

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
              +  +A + F  ++      D+    + +SA      +  GK++H  A+K G +S   
Sbjct: 191 MERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIAS 250

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +GN L+ MY KC C++   + F     +D I+W+ +I GYAQ     +AL LF  + L G
Sbjct: 251 VGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNG 310

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
                     V+ ACS +  + + K+IHGY ++ G    +  + A+VD+Y KCG++  +R
Sbjct: 311 NKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDAR 370

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
             F+ ++  D+V WTSMIS Y  NG    AL L+  M    +    +T+ S L A SSL+
Sbjct: 371 KGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLA 430

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L++GK+++   I+ GF+LE  + S+L  MYA+CG+L+  N VF  + ++D++ W +MI+
Sbjct: 431 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 490

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
               +G G  A++LF ++   +  PD++TF+ +L ACSH GL+  GK +  +M  ++ + 
Sbjct: 491 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIV 550

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHYAC+VD+L RA  L E  +F+ S  I+    +W  LLGACR + N ELG    +K
Sbjct: 551 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 610

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L+EL       Y+L+S+++ A  +  DVE+VR  M+  G+ K PG SWIE+ +++H F+ 
Sbjct: 611 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVV 670

Query: 717 RDKSHSESDEIYKKLAEITEKLERE 741
            D+ H +  +I  +L  + + ++ E
Sbjct: 671 GDQIHPQIVKICSELRRLRDHMKDE 695



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/544 (30%), Positives = 280/544 (51%), Gaps = 10/544 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEP--LRVLETYSRMRVLGISVDA 58
           +Y KCGS++ A+ +F+ ++ + V +WN ++  Y   G      V+E + RMR      + 
Sbjct: 54  LYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNG 113

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            TF  V  A +   +   G + H L +K       F+ +SL+ MY K      AR++FD 
Sbjct: 114 HTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDT 173

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           + E+ + V W +IIS Y+      EA  LF  M+R     + + + + L A         
Sbjct: 174 IPER-NTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHY 232

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G +IH   +K+G      V NAL+ MY +CG + +A        +KD ++W++M+TG+ Q
Sbjct: 233 GKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQ 292

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                +A+  F  +   G KP +   V  ++A   +G L  GK++H Y++K G+   +  
Sbjct: 293 AGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYF 352

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
              L+DMYAKC  +    + F  +   D + WT++I+GYAQN  +  AL L+  +Q+E +
Sbjct: 353 MTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERI 412

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
               + + SVL ACS L  + Q K+IH   I+ G S ++ I +A+  +Y KCG+++    
Sbjct: 413 MPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNL 472

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF  + S+D+++W +MIS    NG   +ALELF  +     + D +T V+ LSA S + +
Sbjct: 473 VFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGL 532

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD--LILWTS 533
           +++GK     ++ + F +   V   + +VD+ +R G L    K F    T D  + LW  
Sbjct: 533 VERGKVYFRMMLDE-FGIVPRVEHYACMVDILSRAGKLH-ETKEFIESATIDHGMCLWRI 590

Query: 534 MINA 537
           ++ A
Sbjct: 591 LLGA 594



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 185/356 (51%), Gaps = 11/356 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + DA + F+    +   TW+AM+  Y   G+    L  +  M + G     FT
Sbjct: 258 MYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFT 317

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VI AC+ +  L+ G +IHG  LK GY+   + + +LV MYAKC     AR+ FD + 
Sbjct: 318 FVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLK 377

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  D+VLW S+IS Y+ +G+   AL L+  MQ   ++ +  T  + L+AC   +    G 
Sbjct: 378 EP-DIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGK 436

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA T+K G +L+V + +AL  MYA+CG + +   V  ++ ++D ++WN+M++G  QN 
Sbjct: 437 QIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNG 496

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIG 299
              KA++ F EL+    KPD V  VN +SA   +G +  GK      + + G V  ++  
Sbjct: 497 EGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVE-- 554

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
                 YA  C V+ + R       ++FI   TI  G       L A   +R  +L
Sbjct: 555 -----HYA--CMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYEL 603


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/716 (33%), Positives = 405/716 (56%), Gaps = 22/716 (3%)

Query: 137 ASGQCL---EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
           +  +CL   EAL   RE  +V     +  +V  LQ C D    +   +IHA  VK+G + 
Sbjct: 47  SEARCLDFREALSFIREGTKV----ESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHK 102

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
             ++   L+ +YA+CG M  A  V  +L  ++ VSW +++TG+V +     A+Q FRE+ 
Sbjct: 103 DAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREML 162

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
            AG  P       A+SAS  L +   GK++H Y+IK     D  IGN+L  +Y+KC  + 
Sbjct: 163 EAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLE 222

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
              + F ++  ++ ISWTT+I+ +  N      L+ F  +  E ++ +   + S L  C 
Sbjct: 223 CAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCC 282

Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            ++ +    +IH   I+ G  S+L I N+I+ +Y KCG I  ++ +F+ +E+  +V+W +
Sbjct: 283 VMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNA 342

Query: 433 MIS------SYVHNGLA-----NEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           MI+       +  + LA      EAL +F  +N + ++ D  T  S LS  SSL  L++G
Sbjct: 343 MIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQG 402

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           ++++   I+ GF  +  V ++LV+MY +CG+++ A+K F  +  + LI WTSMI     +
Sbjct: 403 EQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQN 462

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G+ + A+ LF  M      P+ ITF+ +L ACSH+G+++E   + ++M+ +Y++ P  +H
Sbjct: 463 GQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDH 522

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           YACL+D+  R   L+EA+ F++ M +EP   +W  L+  CR     ELG   A++LL L 
Sbjct: 523 YACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLK 582

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
           P +   Y L+ N++ ++ KWK+V +VR  M+   L +    SWI I +KI+SF    +SH
Sbjct: 583 PKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSH 642

Query: 722 SESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG---HSERLAIAYGVL 778
           ++S E+Y+ L  + EK +  G    ++  V    E+ ++ + L     HSE+LAIA+G+L
Sbjct: 643 AQSGEMYELLGNLHEKAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLL 702

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
            ++    IR+TK++ +C DCH+F +++S L  RE+++RD+ R H F  G CSCGD+
Sbjct: 703 NTSNAVPIRVTKSISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDF 758



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 165/577 (28%), Positives = 289/577 (50%), Gaps = 29/577 (5%)

Query: 34  VSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD 93
           VS    L   E  S +R  G  V++  +  +++ C   K +    KIH  ++K G     
Sbjct: 46  VSEARCLDFREALSFIRE-GTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDA 104

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F++  LV +YAKC     AR++FD +  + +VV W ++++ Y    +   A+ +FREM  
Sbjct: 105 FLMTFLVNVYAKCGTMETARKVFDEL-PRRNVVSWTTLMTGYVHDSKPELAVQVFREMLE 163

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G     YT   AL A  D   + LG +IH  ++K        + N+L ++Y++CG +  
Sbjct: 164 AGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLEC 223

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A     ++ +K+ +SW ++++ +  N      +QFF E+     +P++    +A+S    
Sbjct: 224 AVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCV 283

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           + +L  G ++H+  IK GF S+L I N++M +Y KC  ++   ++F +M     ++W  +
Sbjct: 284 MQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAM 343

Query: 334 IAGYAQ-----------NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
           IAG+A+           + C  +AL +F  +   G+  D+    SVL  CS L  + Q +
Sbjct: 344 IAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGE 403

Query: 383 EIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
           ++H   I+ G LSD+V+  A+V++Y KCG+I+ +   F  +  + ++SWTSMI+ Y  NG
Sbjct: 404 QVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNG 463

Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA- 500
              +AL LF  M  A V  + IT V  LSA S   ++ +   L+ F + K       V  
Sbjct: 464 QPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEA--LDYFQMMKNEYKITPVMD 521

Query: 501 --SSLVDMYARCGALDIANKVFNCVQTKDL----ILWTSMINANGLHGRGKVAIDLFYKM 554
             + L+DM+ R G LD A   F+ ++  DL     +W+ +I   G   +GK+ +  +   
Sbjct: 522 HYACLIDMFVRLGRLDEA---FDFIKEMDLEPNEFIWSILI--AGCRSQGKLELGFYAAE 576

Query: 555 EAESFAP-DHITFLALLYACSHSGLINEGKKFLEIMR 590
           +  +  P D  T+  LL     +G   E  +  ++M+
Sbjct: 577 QLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMK 613



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 204/384 (53%), Gaps = 12/384 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG++  A ++FD++ +R V +W  ++  YV + +P   ++ +  M   G     +T
Sbjct: 113 VYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYT 172

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + A + L   + G +IHG  +K   +    I NSL ++Y+KC     A + F R+ 
Sbjct: 173 LGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIR 232

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K +V+ W ++ISA+  +G+    L  F EM    +  N +T  +AL  C       +G 
Sbjct: 233 DK-NVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGT 291

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG----- 235
           +IH+ T+K G    + + N+++ +Y +CG + EA  +  ++E    V+WN+M+ G     
Sbjct: 292 QIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMM 351

Query: 236 -FVQNDLYC-----KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
            F ++DL       +A+  F +L  +G KPD     + +S    L  L  G+++HA  IK
Sbjct: 352 DFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIK 411

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
            GF+SD+ +G  L++MY KC  +    + F +M+ +  ISWT++I GYAQN    +AL L
Sbjct: 412 TGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLL 471

Query: 350 FRTVQLEGLDADVMIIGSVLMACS 373
           F  ++L G+  + +    VL ACS
Sbjct: 472 FEDMRLAGVRPNKITFVGVLSACS 495



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 181/357 (50%), Gaps = 30/357 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCGS+  A + F ++  + V +W  ++ A+  NGE    L+ +  M    +  + FT
Sbjct: 214 LYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFT 273

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               +  C +++ LD G +IH L +K G++S   I NS++ +Y KC    +A++LFD M 
Sbjct: 274 LTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEM- 332

Query: 121 EKEDVVLWNSIISAYS----------ASGQC-LEALGLFREMQRVGLVTNAYTFVAALQA 169
           E   +V WN++I+ ++          A+ QC  EAL +F ++ R G+  + +TF + L  
Sbjct: 333 ETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSV 392

Query: 170 CEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSW 229
           C        G ++HA T+K+G    V V  AL+ MY +CG +  A+    ++  +  +SW
Sbjct: 393 CSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISW 452

Query: 230 NSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK 289
            SM+TG+ QN    +A+  F +++ AG +P+++  V  +SA    G +    +       
Sbjct: 453 TSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYF----- 507

Query: 290 QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAG 336
           Q   ++ +I   +MD YA  C ++   R+     A DFI           W+ +IAG
Sbjct: 508 QMMKNEYKI-TPVMDHYA--CLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAG 561


>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/554 (40%), Positives = 327/554 (59%), Gaps = 32/554 (5%)

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC- 372
           Y   +F+ +       + ++I   + +   L+AL L+ T+   GL  D M    V+ AC 
Sbjct: 118 YAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACN 177

Query: 373 -----------------SGLKCMSQ--TKEIHGYIIRKGLS------------DLVILNA 401
                            SG +C S   +  IH Y   K L             D+V  NA
Sbjct: 178 ESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNA 237

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           ++D Y K   + ++R VF+ +  +DV+SW +MI+ Y   G  NEAL LF  M    V+  
Sbjct: 238 MIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPT 297

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
             T+VS LSA + L  L KG  L+ +I      +   V ++LVDMYA+CG + +A +VFN
Sbjct: 298 EATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 357

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +++KD++ W ++I    +HG  K A  LF +M+     P+ ITF+A+L ACSH+G+++E
Sbjct: 358 AMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDE 417

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G+K L+ M   Y ++P  EHY C++DLL RA  LEEA + + +M +EP      ALLG C
Sbjct: 418 GQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGC 477

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           R+H N ELGE+V K+L+ L P + G Y+L+SN++AA++KW D  +VR  M+ +G+ K PG
Sbjct: 478 RIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPG 537

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            S IE+   +H F+A D SH ES++IY+KL EI  +L+   GY A T  VL ++EEE+K 
Sbjct: 538 VSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKE 597

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             L  HSE+LAIAYG+L       IRI KNLRVC DCH   KL+S+++GRE++VRD NRF
Sbjct: 598 HALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRF 657

Query: 822 HHFEAGVCSCGDYW 835
           HHFE G CSC D+W
Sbjct: 658 HHFEDGECSCLDFW 671



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 146/303 (48%), Gaps = 30/303 (9%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A+ +F  +       +N+++ A  S+  PL  L  Y  M   G+  D  T+P VIKAC  
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD------------- 117
                 G  +H  V+K G++   +IV+SL+ +YA   D   A+QLF+             
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238

Query: 118 --------RMGEK---------EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
                    MG            DV+ WN++I+ Y+  G+  EAL LF +M+ VG+    
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
            T V+ L AC        G+ +H     +   +   V  AL+ MYA+CGK++ A  V   
Sbjct: 299 ATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 358

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +E+KD ++WN+++ G   +    +A Q F+E++ AG +P+ +  V  +SA    G +  G
Sbjct: 359 MESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEG 418

Query: 281 KEL 283
           ++L
Sbjct: 419 QKL 421



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 153/312 (49%), Gaps = 44/312 (14%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A+ +F  + +     L+NS+I A S+S   LEAL L+  M + GL  +  T+   ++AC 
Sbjct: 119 AKTIFHHL-QNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACN 177

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL-ENKDSVSWN 230
           +SS    G+ +H   VKSG     Y+ ++LI +YA  GK   AA  L+ L   +D VSWN
Sbjct: 178 ESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYAN-GKDLGAAKQLFNLCSARDVVSWN 236

Query: 231 SMLTGFVQ-----------NDLYCK--------------------AMQFFRELQGAGQKP 259
           +M+ G+V+           + + C+                    A+  F +++  G KP
Sbjct: 237 AMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKP 296

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
            +   V+ +SA   LG L  G  LH Y        +  +G  L+DMYAKC  ++   +VF
Sbjct: 297 TEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVF 356

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG----- 374
             M ++D ++W TIIAG A +    +A +LF+ ++  G++ + +   ++L ACS      
Sbjct: 357 NAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVD 416

Query: 375 -----LKCMSQT 381
                L CMS +
Sbjct: 417 EGQKLLDCMSSS 428



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 102/216 (47%), Gaps = 24/216 (11%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +FD++  R V +WN M+  Y   G+P   L  + +MR +G+     T   ++ ACA 
Sbjct: 251 ARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAH 310

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L  LD G  +H  +     +    +  +LV MYAKC     A Q+F+ M E +DV+ WN+
Sbjct: 311 LGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAM-ESKDVLAWNT 369

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           II+  +  G   EA  LF+EM+  G+  N  TFVA L AC            HA  V  G
Sbjct: 370 IIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACS-----------HAGMVDEG 418

Query: 191 QNL------------QVYVANALIAMYARCGKMTEA 214
           Q L            +V     +I + AR G + EA
Sbjct: 419 QKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEA 454



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 39/80 (48%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A Q+F+ +  + V  WN ++     +G      + +  M+  G+  +  T
Sbjct: 342 MYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDIT 401

Query: 61  FPCVIKACAMLKDLDCGAKI 80
           F  ++ AC+    +D G K+
Sbjct: 402 FVAILSACSHAGMVDEGQKL 421


>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
 gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 247/786 (31%), Positives = 408/786 (51%), Gaps = 47/786 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-PLRVLETYSRMRVLG-ISVDA 58
           MY KCG + D  +LFD+  +     WN +L  Y  +G+    V++ +  M   G +   +
Sbjct: 81  MYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSS 140

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR-KARQLFD 117
            T   V+  CA   +L+ G  +HG V+K G++   F  N+LV+MYAKC      A  +FD
Sbjct: 141 VTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFD 200

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC---EDSS 174
            +  K DVV WN++I+  + +G   EA  LF  M +  +  N  T    L  C   +++ 
Sbjct: 201 SIIHK-DVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENI 259

Query: 175 FETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
               G +IH+  ++  + +  V V NAL++ Y + G+  EA  + + ++ +D VSWN+++
Sbjct: 260 AHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTII 319

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKP-DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
            G+  N  + K++  F  L        D V  V+ + A  +L NL  GK++HAY ++  F
Sbjct: 320 AGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPF 379

Query: 293 V-SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           +  D   GN L+  YAKC  +      F  ++ +D ISW +I+  + +   H + L L  
Sbjct: 380 LFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLH 439

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG----LSDLVILNAIVDVYG 407
            +    +  D + I +++  C+ L  + + KEIHGY IR G     +   + NAI+D Y 
Sbjct: 440 VMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYS 499

Query: 408 KCGNIDYSRNVFESIESK--------------------------------DVVSWTSMIS 435
           KCGNI+Y+  +F+++  K                                D+ +W  M+ 
Sbjct: 500 KCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVR 559

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y  N    +ALELF  +    ++ D +T++S +   + ++ +   ++ +G+IIR  F  
Sbjct: 560 VYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE- 618

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
           +  +  +L+D YA+CG +  A K+F     KDL+++T+MI    +HG  + A++ F  M 
Sbjct: 619 DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHML 678

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
                PDH+ F ++L ACSH+G I EG K  + +   + + P  E +AC+VDLL R  H+
Sbjct: 679 NMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHV 738

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
            EAY FV  + IE  A +W  LLGAC+ +   ELG IVA KL +++  + GNY+++SN++
Sbjct: 739 SEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLY 798

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           AA  +W  V +VR  MR   LKK  G SWIE+    + F+  D SH + + IY  L  + 
Sbjct: 799 AADDRWDGVMEVRKMMRNKDLKKPAGCSWIEVERTNNIFVVGDCSHPQRNLIYSTLCTLD 858

Query: 736 EKLERE 741
           ++++  
Sbjct: 859 QQVKEP 864



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 165/563 (29%), Positives = 282/563 (50%), Gaps = 46/563 (8%)

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           D      ++K+C+ L   + G  +H  V+K G+ S      +L+ MYAKC       +LF
Sbjct: 36  DHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLF 95

Query: 117 DRMGEKEDVVLWNSIISAYSASGQC-LEALGLFREMQRVG-LVTNAYTFVAALQACEDSS 174
           D+ G + D V+WN ++S YS SG+   + + +FR M   G ++ ++ T    L  C  S 
Sbjct: 96  DQFG-RCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSG 154

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT-EAAGVLYQLENKDSVSWNSML 233
               G  +H   +KSG  +  +  NAL++MYA+CG +  +A  V   + +KD VSWN+M+
Sbjct: 155 NLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMI 214

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN---GKELHAYAIKQ 290
            G  +N L  +A   F  +     KP+     N +         +    G+++H+Y ++ 
Sbjct: 215 AGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQW 274

Query: 291 GFVS-DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALEL 349
             +S D+ + N L+  Y K         +F+ M A+D +SW TIIAGYA N   LK+L +
Sbjct: 275 PELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHV 334

Query: 350 F-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVY 406
           F   V LE L  D + + S+L AC+ L  +   K++H YI+R      D    NA+V  Y
Sbjct: 335 FGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFY 394

Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
            KCG I+ + + F  I  KD++SW S++ ++      +  L L ++M + ++  DS+T++
Sbjct: 395 AKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTIL 454

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNL---EGSVASSLVDMYARCGALDIANKVFNCV 523
           + +   +SL  +KK KE++G+ IR G  L     +V ++++D Y++CG ++ ANK+F  +
Sbjct: 455 TIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNL 514

Query: 524 QTK--------------------------------DLILWTSMINANGLHGRGKVAIDLF 551
             K                                DL  W  M+     +   + A++LF
Sbjct: 515 SEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELF 574

Query: 552 YKMEAESFAPDHITFLALLYACS 574
            K++ +   PD +T ++L+  C+
Sbjct: 575 LKLQTQGMKPDVVTIMSLIPVCT 597



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 232/466 (49%), Gaps = 26/466 (5%)

Query: 128 WNSIISAYSASGQCLEALGLFREMQR--VGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
           W S I +     +  EAL  F    +       +     A L++C       LG  +H+ 
Sbjct: 3   WASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSY 62

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV---QNDLY 242
            VK G       + AL+ MYA+CG + +   +  Q    D V WN +L+G+    +ND  
Sbjct: 63  VVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKND-- 120

Query: 243 CKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
              M+ FR +  +G+  P  V     +    R GNL  GK +H Y IK GF  D   GN 
Sbjct: 121 ADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNA 180

Query: 302 LMDMYAKC---CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           L+ MYAKC    C  Y   VF  +  +D +SW  +IAG A+N    +A  LF  +    +
Sbjct: 181 LVSMYAKCGLVACDAY--AVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSV 238

Query: 359 DADVMIIGSVLMACSGL------KCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCG 410
             +   + ++L  C+        +C    ++IH Y+++  +  +D+ + NA++  Y K G
Sbjct: 239 KPNYATVANILPVCASFDENIAHRC---GRQIHSYVLQWPELSADVSVCNALLSFYLKVG 295

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSAL 469
               + ++F +++++D+VSW ++I+ Y  NG   ++L +F  L++   +  DS+T+VS L
Sbjct: 296 RTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSIL 355

Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIANKVFNCVQTKDL 528
            A + L  L+ GK+++ +I+R  F  E + A ++LV  YA+CG ++ A   F+ +  KDL
Sbjct: 356 PACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDL 415

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           I W S+++A G        + L + M      PD +T L +++ C+
Sbjct: 416 ISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCA 461



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 257/526 (48%), Gaps = 29/526 (5%)

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFREL--QGAGQKPD-QVCTVNAVSASGRLGNLLNGKEL 283
           ++W S +     +  + +A+ FF       A  KPD +V      S S  L + L GK L
Sbjct: 1   MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNL-GKCL 59

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
           H+Y +KQG VS       L++MYAKC  ++   ++F Q    D + W  +++GY+++  +
Sbjct: 60  HSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKN 119

Query: 344 -LKALELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILN 400
               +++FR +   G +    + I +VL  C+    ++  K +HGY+I+ G   D    N
Sbjct: 120 DADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGN 179

Query: 401 AIVDVYGKCGNIDY-SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
           A+V +Y KCG +   +  VF+SI  KDVVSW +MI+    NGL  EA  LF LM + +V+
Sbjct: 180 ALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVK 239

Query: 460 SDSITLVSALSAASSLS---ILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDI 515
            +  T+ + L   +S       + G++++ ++++    + + SV ++L+  Y + G    
Sbjct: 240 PNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKE 299

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA-ESFAPDHITFLALLYACS 574
           A  +F  +  +DL+ W ++I    L+G    ++ +F  + + E    D +T +++L AC+
Sbjct: 300 AESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACA 359

Query: 575 HSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
               +  GK+    I+R  +  +      A LV    +  ++EEAY    SM        
Sbjct: 360 QLDNLQAGKQVHAYILRHPFLFEDTSAGNA-LVSFYAKCGYIEEAYH-TFSMISRKDLIS 417

Query: 634 WCALLGAC--RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAAS----RKWKDVEQV 687
           W ++L A   + H ++ L  +     L++ P +     +I   F AS    +K K++   
Sbjct: 418 WNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIH--FCASLLRVKKVKEIHGY 475

Query: 688 RMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
            +R  GS L  T  +    +GN I    ++  +   ++++++ L+E
Sbjct: 476 SIR-SGSLLCATAPT----VGNAILDAYSKCGNIEYANKMFQNLSE 516


>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/726 (31%), Positives = 401/726 (55%), Gaps = 2/726 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G +  ++ +F+       F W  ++  +V +      +  Y++M    I +  F F
Sbjct: 43  YSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIF 102

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V++ACA   +LD G ++HG ++K G D    +  SL+ MY        A+++FD M  
Sbjct: 103 SSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTT 162

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D+V W+SIIS Y  +G+  E L +FR +    +  ++ T ++   AC +  F  L   
Sbjct: 163 R-DLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKS 221

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   ++     +  + +AL+ MY+RC   + A  +   + N+   SW +M++ + ++  
Sbjct: 222 VHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRW 281

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           + +A+Q F E+      P+ V  +  +S+      L  GK +H YA+K   + D  +G  
Sbjct: 282 FKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPA 341

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L++ YA+   ++Y  +V + +  ++ ISW  +I+ YA      +AL +F  +Q +G   D
Sbjct: 342 LIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPD 401

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES 421
              + S + AC+ +  +    +IHGY I++ + D  + N+++D+Y KCG++D +  +F+ 
Sbjct: 402 SFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEFVQNSLIDMYSKCGHVDLAYLIFDR 461

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           I+SK VV+W SMI  +   G + EA+ LF  M    ++ + +T ++A+ A S +  L+KG
Sbjct: 462 IQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKG 521

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           K L+  +I  G   +  + ++L+DMYA+CG L IA++VF+ +  + ++ W++MI   G+H
Sbjct: 522 KWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMH 581

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G    AI LF +M      P+ ITF+ +L ACSHSG + EGK +   M+ +++++P  EH
Sbjct: 582 GDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSMK-NFEVEPNLEH 640

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           +AC+VDLL RA  L+EAY+ + SM     A +W ALL  CR+H   ++   + + LL++ 
Sbjct: 641 FACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMR 700

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
             + G Y L+SN++A    W    +VR  M+G GLKK PG S IE+  K++ F A D SH
Sbjct: 701 TDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAGDVSH 760

Query: 722 SESDEI 727
            +  EI
Sbjct: 761 WQVKEI 766



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 158/547 (28%), Positives = 297/547 (54%), Gaps = 8/547 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYG  G + +A+++FD ++ R + +W++++  YV NGE    LE +  +    + +D+ T
Sbjct: 143 MYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVT 202

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              +  AC  L  L     +HG +++   ++   + ++LV MY++C DF  A ++F  M 
Sbjct: 203 MLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMF 262

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  +  W ++IS Y+ S    +AL +F EM    +  NA T +A L +C   +    G 
Sbjct: 263 NRS-IASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGK 321

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   VK        +  ALI  YA+ GK++    VL+ +  ++ +SWN +++ +    
Sbjct: 322 SVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQG 381

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L+ +A+  F ++Q  GQ PD     +++SA   +G L  G ++H YAIK+  + +  + N
Sbjct: 382 LFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEF-VQN 440

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +L+DMY+KC  V+    +F ++ ++  ++W ++I G++Q    L+A+ LF  + L  LD 
Sbjct: 441 SLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDM 500

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           + +   + + ACS +  + + K +H  +I  G+  DL I  A++D+Y KCG++  +  VF
Sbjct: 501 NEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVF 560

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           +S+  + VVSW++MI     +G  + A+ LF  M +  ++ + IT ++ LSA S    ++
Sbjct: 561 DSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVE 620

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
           +GK    F   K F +E ++   + +VD+ +R G LD A ++ N +    +  +W +++N
Sbjct: 621 EGKFY--FNSMKNFEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLN 678

Query: 537 ANGLHGR 543
              +H R
Sbjct: 679 GCRIHQR 685



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 165/302 (54%), Gaps = 1/302 (0%)

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           LH++ +  G   D Q    L++ Y++  C+     VF      D   W  +I  +  +N 
Sbjct: 20  LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNF 79

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNA 401
             +A+ L+  +  + +     I  SVL AC+G   +   +E+HG II+ GL  D V+  +
Sbjct: 80  CGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETS 139

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           ++ +YG  G +  ++ VF+++ ++D+VSW+S+IS YV NG ++E LE+F L+   +VE D
Sbjct: 140 LLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELD 199

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
           S+T++S   A   L  L+  K ++G IIR+     G +  +LV MY+RC     A ++F+
Sbjct: 200 SVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFS 259

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  + +  WT+MI+        K A+ +F +M     AP+ +T +A+L +C+   L+ E
Sbjct: 260 NMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLRE 319

Query: 582 GK 583
           GK
Sbjct: 320 GK 321



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 4/214 (1%)

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           +C+ L+ ++    +H +++  GL  D      +++ Y + G +  S+ VFE+ ++ D   
Sbjct: 10  SCTSLRPLTL---LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFM 66

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           W  +I  +V +    EA+ L+  M    +        S L A +    L  G+E++G II
Sbjct: 67  WAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRII 126

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           + G +++  V +SL+ MY   G L  A KVF+ + T+DL+ W+S+I+    +G     ++
Sbjct: 127 KYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLE 186

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           +F  + ++    D +T L++  AC   G +   K
Sbjct: 187 MFRLLVSQDVELDSVTMLSIAGACGELGFLRLAK 220


>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/571 (39%), Positives = 351/571 (61%), Gaps = 11/571 (1%)

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC------CVNYMGRVFYQMTAQD 326
           R  N+   K++HA  IK           +   + AKC        +NY   +F  +    
Sbjct: 40  RCNNIDEFKQVHARFIKL--SLFCSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPC 97

Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
              + T+I GY        AL  +  +   G++ D      +L AC+ LK + + K+IHG
Sbjct: 98  TFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIHG 157

Query: 387 YIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANE 445
           ++ + GL +D+ + N+++++YG+CG ++ S  VFE +E K   SW+SM S+ V  G+ +E
Sbjct: 158 HVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSE 217

Query: 446 ALELFYLM-NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
            L LF  M  E N++++   +VSALSA ++   L  G  ++GF++R    L   V +SLV
Sbjct: 218 CLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLV 277

Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
           DMY +CG +D A  +F  ++ ++ + +++MI+   LHG G+ A+ +F +M  E   PDH+
Sbjct: 278 DMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHV 337

Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
            +++LL ACSHSGL+ EG++    M  + +++P  EHY CLVDLLGRA  LEEA + ++S
Sbjct: 338 VYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQS 397

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
           + IE    VW + L  CRVH N ELG+I A++LL+L   NPG+Y+LISN+++ +  W DV
Sbjct: 398 IPIEQNDVVWRSFLSQCRVHQNIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDDV 457

Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
            + R  +   GLK+TPG S +++  K H F+++D+SH +  EIYK L ++  +L+ EG  
Sbjct: 458 ARSRTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRSHPQCKEIYKMLHQMEWQLKFEGYS 517

Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
              TQ +L NV+EEEK + L GHS+++AIA+ +L +  GS+I+I +NLR+C DCH++ K 
Sbjct: 518 PDLTQILL-NVDEEEKKERLKGHSQKVAIAFALLYTPPGSIIKIARNLRMCSDCHTYTKK 576

Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +S ++ RE+VVRD NRFH F+ G CSC DYW
Sbjct: 577 ISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 607



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 149/284 (52%), Gaps = 2/284 (0%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F  +     F +  M+  YV+       L  Y+ M   GI  D FT+PC++KAC  
Sbjct: 86  AASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTR 145

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           LK +  G +IHG V K G ++  F+ NSL+ MY +C +   +  +F+++ E +    W+S
Sbjct: 146 LKAIREGKQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKL-EFKSAASWSS 204

Query: 131 IISAYSASGQCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           + SA    G   E L LFREM R   L       V+AL AC ++    LGM IH   +++
Sbjct: 205 MFSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRN 264

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
              L + V  +L+ MY +CG +  A  +  ++E ++++++++M++GF  +     A++ F
Sbjct: 265 ISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMF 324

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            E+   G +PD V  V+ ++A    G +  G+ +    +K+G V
Sbjct: 325 SEMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKV 368



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 157/297 (52%), Gaps = 6/297 (2%)

Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
           AL  + EM   G+  + +T+   L+AC        G +IH    K G    V+V N+LI 
Sbjct: 117 ALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIHGHVFKLGLEADVFVQNSLIN 176

Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL-QGAGQKPDQV 262
           MY RCG+M  ++ V  +LE K + SW+SM +  V   ++ + +  FRE+ +    K ++ 
Sbjct: 177 MYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAEES 236

Query: 263 CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
             V+A+SA    G L  G  +H + ++     ++ +  +L+DMY KC C++    +F +M
Sbjct: 237 GMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKM 296

Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
             ++ ++++ +I+G+A +     AL +F  +  EGL+ D ++  S+L ACS    + + +
Sbjct: 297 EKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEGR 356

Query: 383 EIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYSRNVFES--IESKDVVSWTSMIS 435
            + G ++++G  +        +VD+ G+ G ++ +    +S  IE  DVV W S +S
Sbjct: 357 RVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVV-WRSFLS 412



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 195/374 (52%), Gaps = 13/374 (3%)

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           M  AA +   +++  +  + +M+ G+V    +  A+ F+ E+   G +PD       + A
Sbjct: 83  MNYAASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKA 142

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
             RL  +  GK++H +  K G  +D+ + N+L++MY +C  +     VF ++  +   SW
Sbjct: 143 CTRLKAIREGKQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASW 202

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           +++ +         + L LFR +  E  L A+   + S L AC+    ++    IHG+++
Sbjct: 203 SSMFSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLL 262

Query: 390 RKGLSDL--VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           R  +S+L  ++  ++VD+Y KCG ID + ++F+ +E ++ +++++MIS +  +G    AL
Sbjct: 263 R-NISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESAL 321

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVD 505
            +F  M +  +E D +  VS L+A S   ++K+G+ + G ++++G  +E +      LVD
Sbjct: 322 RMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEG-KVEPTAEHYGCLVD 380

Query: 506 MYARCGALDIANKVFNCVQT-KDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAP 561
           +  R G L+ A +    +   ++ ++W S ++   +H     G++A     K+ + +  P
Sbjct: 381 LLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCRVHQNIELGQIAAQELLKLCSHN--P 438

Query: 562 DHITFLALLYACSH 575
                ++ +Y+ +H
Sbjct: 439 GDYLLISNMYSQAH 452



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 11/270 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MYG+CG +  +  +F+K+  ++  +W++M  A V  G     L  +  M R   +  +  
Sbjct: 177 MYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAEES 236

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
                + ACA    L+ G  IHG +L+   +    +  SLV MY KC     A  +F +M
Sbjct: 237 GMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKM 296

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK + + ++++IS ++  G+   AL +F EM + GL  +   +V+ L AC  S     G
Sbjct: 297 -EKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEG 355

Query: 180 MEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFV 237
             +    +K G+          L+ +  R G + EA   +  +   ++ V W S L+   
Sbjct: 356 RRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLS--- 412

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
                C+  Q     Q A Q+  ++C+ N 
Sbjct: 413 ----QCRVHQNIELGQIAAQELLKLCSHNP 438


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/674 (33%), Positives = 379/674 (56%), Gaps = 6/674 (0%)

Query: 167 LQACEDSSFETLGMEIHA---ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN 223
           L+ C +SS+   G  IH     T +S +   VY  N+LI +Y +CG+   A  V   +  
Sbjct: 38  LKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMPE 97

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKE 282
           ++ VSW +M+ G+  +    + ++ F+ +  + + +P++        +    G +  GK+
Sbjct: 98  RNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGKQ 157

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
            H   +K G +S   + NTL+ MY+ C       RV   +   D   +++ ++GY +   
Sbjct: 158 FHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGA 217

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNA 401
             +  E+ R +  E L  D +   S L  CS L+ ++  ++IH  ++R G  S++    A
Sbjct: 218 FKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGA 277

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           I+++YGKCG + Y++ VF++  ++++V  T+++ +Y  +    EAL LF  M+   V  +
Sbjct: 278 IINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
             T   +L++ + LS+LK G  L+G +++ G+     V ++LV+MYA+ G+++ A K F+
Sbjct: 338 EYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFS 397

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  +D++ W +MI     HG G+  ++ F +M      P+ ITF+ +L ACSH G + +
Sbjct: 398 GMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQ 457

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G  +   +   + + P  +HY C+V LL +A   ++A  F+R+  IE     W ALL AC
Sbjct: 458 GLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNAC 517

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
            V  N  LG+ VA+  +   P + G YVL+SN+ A SR+W+ V +VR  M   G+KK PG
Sbjct: 518 YVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKEPG 577

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            SWI I N+ H F+A +  H E   IY K+ E+  K+ R  GY      V H+V+EE++ 
Sbjct: 578 VSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKI-RPLGYSPDVAGVFHDVDEEQRE 636

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             L  HSE+LA+AYG++K+ E S + +TKN+R+C DCHS  KL+S++  R +V+RD+NRF
Sbjct: 637 DNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRF 696

Query: 822 HHFEAGVCSCGDYW 835
           HHF  G CSC DYW
Sbjct: 697 HHFRDGQCSCCDYW 710



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 236/482 (48%), Gaps = 10/482 (2%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTD---FIVNSLVAMYAKCYDFRKARQLFDRMG 120
           ++K CA    L  G  IHG ++     S     + +NSL+ +Y KC +  +AR++FD M 
Sbjct: 37  LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
           E+ +VV W +++  Y  SG   E L LF+ M        N +      ++C  S     G
Sbjct: 97  ER-NVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEG 155

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            + H   +KSG     +V N L+ MY+ C    EA  VL  L   D   ++S L+G+++ 
Sbjct: 156 KQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             + +  +  R +       D +  ++ +     L +L   +++H+  ++ GF S+++  
Sbjct: 216 GAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEAS 275

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
             +++MY KC  V Y  RVF    AQ+ +  TTI+  Y Q+    +AL LF  +  + + 
Sbjct: 276 GAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNV 418
            +       L + + L  +     +HG +++ G  + V++ NA+V++Y K G+I+ +R  
Sbjct: 336 PNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKA 395

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F  +  +D+V+W +MI  + H+GL  E LE F  M  A    + IT +  L A S +  +
Sbjct: 396 FSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFV 455

Query: 479 KKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
           ++G      +++K FN++  +   + +V + ++ G    A         + D++ W +++
Sbjct: 456 EQGLYYFNQLMKK-FNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALL 514

Query: 536 NA 537
           NA
Sbjct: 515 NA 516



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 218/440 (49%), Gaps = 5/440 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS-VDAF 59
           +Y KCG  + A ++FD + +R V +W AM+  Y ++G    VL+ +  M     S  + F
Sbjct: 78  LYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEF 137

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
               V K+C+    ++ G + HG  LK G  S +F+ N+LV MY+ C    +A ++ D +
Sbjct: 138 VATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDL 197

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
               D+ +++S +S Y   G   E   + R M +  LV +  T+++ L+ C +     L 
Sbjct: 198 -PYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLA 256

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH+  V+ G N +V  + A+I MY +CGK+  A  V      ++ V   +++  + Q+
Sbjct: 257 RQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQD 316

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             + +A+  F ++      P++     ++++   L  L +G  LH   +K G+ + + +G
Sbjct: 317 KSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVG 376

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L++MYAK   +    + F  MT +D ++W T+I G++ +    + LE F  + + G  
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEI 436

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRN 417
            + +    VL ACS +  + Q       +++K     DL     IV +  K G    + +
Sbjct: 437 PNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAED 496

Query: 418 VFESIESK-DVVSWTSMISS 436
              +   + DVV+W +++++
Sbjct: 497 FMRTAPIEWDVVAWRALLNA 516


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/590 (37%), Positives = 342/590 (57%), Gaps = 35/590 (5%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           GK+LH + IK G      + N L++MY KC  +     +F Q+  +D ISW +I+    Q
Sbjct: 22  GKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQ 81

Query: 340 NNCHLKALELFRTV-QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL-V 397
            N     L +F  + + +GL  D  +   ++ AC+ L  M Q K++H   I   +SD  V
Sbjct: 82  ANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDV 141

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           + +++VD+Y KCG  D  R VF+SI SK+ +SWT+MIS Y  +G   +A++LF  M   N
Sbjct: 142 VKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKN 201

Query: 458 VES--------------------------------DSITLVSALSAASSLSILKKGKELN 485
           + S                                D   L S + A+++L++L  GK+++
Sbjct: 202 LLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIH 261

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
             +I  G+     V+++LVDMYA+C  +  A K+F  +  +D++ WTS+I     HG  +
Sbjct: 262 CLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAE 321

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A+ L+ +M +    P+ +TF+ L+YACSH GL+++G+ F   M  DY ++P  +HY CL
Sbjct: 322 EALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCL 381

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           +DLL R+ HLEEA   +++M  +P    W ALL AC  H N  +G  VA  LL L P +P
Sbjct: 382 LDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDP 441

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
             Y+L+SN++A++  W+ V +VR  M    +KK PG S I +G +   F+A + SH   +
Sbjct: 442 STYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKE 501

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
           EI+  L E+  ++++  GY+  T  VLH++E++EK + L+ HSERLA+AYG+LK   G +
Sbjct: 502 EIFGLLEELDAEMKKR-GYIPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMV 560

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + I KNLRVC DCH+  K +S +  RE+VVRDANR+HHF+ G CSC ++W
Sbjct: 561 LHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 235/518 (45%), Gaps = 80/518 (15%)

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
            V  LQAC       +G ++H   +K+G +    ++N LI MY +CG + +A  +  QL 
Sbjct: 6   LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65

Query: 223 NKDSVSWNSMLTGFVQNDLYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
           ++D +SW S+LT   Q +L    +  F  + +  G +PD       V A   LG +  GK
Sbjct: 66  HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           ++HA  I      D  + ++L+DMYAKC   +    VF  +++++ ISWT +I+GYAQ+ 
Sbjct: 126 QVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSG 185

Query: 342 CHLKALELFRTVQL-------------------------------EGLD-ADVMIIGSVL 369
             L A++LF+ + +                               +G+D  D  I+ S++
Sbjct: 186 RKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSII 245

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            A + L  +   K+IH  +I  G  S L + NA+VD+Y KC ++  ++ +F  +  +D+V
Sbjct: 246 GASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIV 305

Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGF 487
           SWTS+I     +GLA EAL L+  M    ++ + +T V  + A S + ++ KG+   N  
Sbjct: 306 SWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSM 365

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
           I   G N      + L+D+ +R G L+ A  +                            
Sbjct: 366 IKDYGINPSLQHYTCLLDLLSRSGHLEEAENL---------------------------- 397

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH---YAC 604
                 ++A  F PD  T+ ALL AC+H          + I   D+ L   PE    Y  
Sbjct: 398 ------IKAMPFKPDEATWAALLSACNH-----HRNTLIGIRVADHLLSLKPEDPSTYIL 446

Query: 605 LVDLLGRANHLEEAYQFVR---SMQIEPTAEVWCALLG 639
           L ++   A   E   +  R   +M+++      C +LG
Sbjct: 447 LSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLG 484



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 201/412 (48%), Gaps = 37/412 (8%)

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           ++ACA  +    G K+H  ++K G D    + N+L+ MY KC   + A  LF+++  + D
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHR-D 68

Query: 125 VVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            + W SI++A + +      L +F  M ++ GL  + Y F   ++AC        G ++H
Sbjct: 69  PISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVH 128

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           A  + S  +    V ++L+ MYA+CG       V   + +K+S+SW +M++G+ Q+    
Sbjct: 129 ATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKL 188

Query: 244 KAMQFFR-------------------------------ELQGAG-QKPDQVCTVNAVSAS 271
            A+Q F+                               E++  G    D     + + AS
Sbjct: 189 DAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGAS 248

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             L  L  GK++H   I  G+ S L + N L+DMYAKC  V    ++F +M  +D +SWT
Sbjct: 249 ANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWT 308

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
           +II G AQ+    +AL L+  +   GL  + +    ++ ACS +  +S+ +     +I+ 
Sbjct: 309 SIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKD 368

Query: 392 -GLSD-LVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISSYVHN 440
            G++  L     ++D+  + G+++ + N+ +++  K D  +W +++S+  H+
Sbjct: 369 YGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHH 420



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 35/342 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MYGKCG + DA  LF+++  R   +W ++L A      P   L  +  M +  G+  D +
Sbjct: 47  MYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHY 106

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
            F C++KACA+L  +  G ++H   +       D + +SLV MYAKC      R +FD +
Sbjct: 107 VFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSI 166

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFR------------------------------ 149
             K  +  W ++IS Y+ SG+ L+A+ LF+                              
Sbjct: 167 SSKNSIS-WTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLF 225

Query: 150 -EMQRVGL-VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
            EM+  G+ + + +   + + A  + +   LG +IH   +  G    ++V+NAL+ MYA+
Sbjct: 226 MEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAK 285

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
           C  +  A  +  ++  +D VSW S++ G  Q+ L  +A+  +  +   G KP++V  V  
Sbjct: 286 CSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGL 345

Query: 268 VSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAK 308
           + A   +G +  G+      IK  G    LQ    L+D+ ++
Sbjct: 346 IYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSR 387


>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
          Length = 830

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/553 (37%), Positives = 345/553 (62%), Gaps = 11/553 (1%)

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F SD  +   L++ YA    +    +VF +   ++   W  ++   A  +   +AL    
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339

Query: 352 TVQLEGLDADVMIIGSVLMAC-----SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDV 405
            +   G+  D       L AC     S L   ++ +E+H + IR+G      +   ++D 
Sbjct: 340 DMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDC 399

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM--NEANVESDSI 463
           Y K G + Y+  VF S+  +++VSW++MI  Y  N    +A+++F  M  ++A++  +SI
Sbjct: 400 YAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSI 459

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T+VS L A + ++ L +GK L+ +I+R+GF+L  SV ++L+ MY +CG L+    +FN +
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519

Query: 524 -QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
            + ++++ W S+I+  G+HG G+ ++ +F +M  E  +P+ ITF+++L ACSH GL+ +G
Sbjct: 520 GRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQG 579

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
           KK  E M  +Y + P  EHYAC+VDLLGRA  L+EA + ++SM+I+P+ +VW +LLGACR
Sbjct: 580 KKLFESM-VEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACR 638

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
           +H + E  E+    L +L+P N GNYVL+++++A ++    V+ ++  +    L+K PG 
Sbjct: 639 IHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGC 698

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQ 762
           SWIE+  K++SF++ D  + + +E+   + E   +++ E GYV  T+ VL+++EEEEK +
Sbjct: 699 SWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNE-GYVPDTRSVLYDIEEEEKER 757

Query: 763 MLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFH 822
           +L GHSE+LA+A+G++K+  G  IRITKNLR+C DCHS  K +S+   RE+VVRD NRFH
Sbjct: 758 ILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFH 817

Query: 823 HFEAGVCSCGDYW 835
           HF  GVCSC DYW
Sbjct: 818 HFRNGVCSCRDYW 830



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 187/359 (52%), Gaps = 14/359 (3%)

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           +++  LI  YA    +  A  V  +   K+   WN+ML      D   +A+    ++   
Sbjct: 285 FLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRL 344

Query: 256 GQKPDQVCTVNAVSA-----SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           G   D     + + A     +  L      +E+HA+AI++G+     +  TL+D YAK  
Sbjct: 345 GVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLG 404

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV----MIIG 366
            V+Y  RVF  M  ++ +SW+ +I  YA+N     A+++F+  ++   DAD+    + I 
Sbjct: 405 IVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQ--EMMASDADLVPNSITIV 462

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESI-ES 424
           SVL AC+G+  + Q K +H YI+R+G   LV +LNA++ +Y KCG ++  R +F  I   
Sbjct: 463 SVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRR 522

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           ++VVSW S+IS Y  +G   E+L++F  M E  +  + IT VS L A S + ++++GK+L
Sbjct: 523 RNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKL 582

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHG 542
              ++           + +VD+  R G LD A ++   ++ +    +W S++ A  +HG
Sbjct: 583 FESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHG 641



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 201/394 (51%), Gaps = 24/394 (6%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHG-LVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           T+  ++ A A  +D    A +H  L     + S  F+   L+  YA       ARQ+FD 
Sbjct: 250 TYESLLLAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSALPAARQVFDE 309

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
              K ++ +WN+++ A + +    EAL    +M R+G+  ++Y++   L+AC  +S   L
Sbjct: 310 APVK-NIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASASHL 368

Query: 179 GM-----EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                  E+HA  ++ G  L  +VA  LI  YA+ G ++ A  V   + +++ VSW++M+
Sbjct: 369 PASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMI 428

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQK--PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
             + +N+    A+Q F+E+  +     P+ +  V+ + A   +  L  GK LHAY +++G
Sbjct: 429 GCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRG 488

Query: 292 FVSDLQIGNTLMDMYAKCCCV-------NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL 344
           F   + + N LM MY KC C+       N++GR       ++ +SW ++I+GY  +    
Sbjct: 489 FDLLVSVLNALMAMYMKCGCLETGRYIFNWIGR------RRNVVSWNSLISGYGMHGFGR 542

Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-IV 403
           ++L++F  +  EG+  +++   SVL ACS +  + Q K++   ++   ++      A +V
Sbjct: 543 ESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMV 602

Query: 404 DVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
           D+ G+ G +D +  + +S+  +     W S++ +
Sbjct: 603 DLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGA 636



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 148/290 (51%), Gaps = 9/290 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y    ++  A Q+FD+   + +F WNAML A          L   + M  LG+ VD++++
Sbjct: 294 YAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSY 353

Query: 62  PCVIKAC--AMLKDLDCGAKI---HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
              +KAC  A    L   A++   H   ++ GY     +  +L+  YAK      A ++F
Sbjct: 354 AHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVF 413

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACEDSS 174
             M ++ ++V W+++I  Y+ + +  +A+ +F+EM      LV N+ T V+ L AC   +
Sbjct: 414 TSMPDR-NLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVN 472

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL-ENKDSVSWNSML 233
               G  +HA  ++ G +L V V NAL+AMY +CG +     +   +   ++ VSWNS++
Sbjct: 473 ALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLI 532

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           +G+  +    +++Q F E+   G  P+ +  V+ + A   +G +  GK+L
Sbjct: 533 SGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKL 582



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 3/235 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV--LGISVDAF 59
           Y K G V  AE++F  +  R + +W+AM+G Y  N  P   ++ +  M      +  ++ 
Sbjct: 400 YAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSI 459

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   V+ ACA +  L  G  +H  +L+ G+D    ++N+L+AMY KC      R +F+ +
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
           G + +VV WNS+IS Y   G   E+L +F EM   G+  N  TFV+ L AC        G
Sbjct: 520 GRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQG 579

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
            ++  + V+     +      ++ +  R G++ EA  ++  +  + S   W S+L
Sbjct: 580 KKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLL 634


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/580 (39%), Positives = 357/580 (61%), Gaps = 5/580 (0%)

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
           Q   Q+C  N + +  R  +L  G +LHA+ +K G  +   + + L+++Y+K     +  
Sbjct: 23  QNYRQIC--NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSL 80

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           +VF +   +   +W+++I+ +AQN   L AL+ FR +  +G+  D  I  S   AC  L+
Sbjct: 81  QVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLR 140

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
                K +H   ++ G   D+ + +++VD+Y KCG I  +R++F+ +  ++VVSW+ MI 
Sbjct: 141 RSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIY 200

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y       EAL LF      +V+ +  T  S +   SS + L+ GK ++G  ++  F+ 
Sbjct: 201 GYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDS 260

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
              V S+L+ +Y++CG ++ A +VF+ + T++L LW SM+ A   H   +    LF +M 
Sbjct: 261 SSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMG 320

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
                P+ I+FL++LYACSH+GL+ +G+++  +MR DY ++P  EHYA LVDLLGRA  L
Sbjct: 321 NVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMR-DYGIEPETEHYASLVDLLGRAGKL 379

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           +EA   ++ M + PT  VW ALL  CR+H + E+   VA ++LE+D  + G +VL+SN +
Sbjct: 380 QEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAY 439

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           AA+ ++++  ++R  +R  G+KK  G SW+E GNK+H+F A D+SH++  EIY+KL E+ 
Sbjct: 440 AAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELE 499

Query: 736 EKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVC 795
           E++E + GYVA T FVL  V+ EEK + +  HSERLAIA+G++    G  IR+ KNLRVC
Sbjct: 500 EEME-KAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVC 558

Query: 796 VDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            DCH+  K +S+  GR L+VRD NRFH FE G CSCGDYW
Sbjct: 559 GDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 195/385 (50%), Gaps = 5/385 (1%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G+++HA  +K G      V++ LI +Y++      +  V  +   K S +W+S+++ F Q
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N+    A+QFFR +   G +PD     +A  A G L     GK +H  A+K G+  D+ +
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G++L+DMYAKC  +     +F +M  ++ +SW+ +I GYAQ +  ++AL LF+   +E +
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
           D +     SV+  CS    +   K IHG  ++    S   + +A++ +Y KCG I+ +  
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ I ++++  W SM+ +   +        LF  M    ++ + I+ +S L A S   +
Sbjct: 284 VFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGL 343

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMIN 536
           ++KG+E    +   G   E    +SLVD+  R G L  A  V   +  +    +W +++ 
Sbjct: 344 VEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLT 403

Query: 537 ANGLHGRGKVA---IDLFYKMEAES 558
              +H   ++A    D   +M++ S
Sbjct: 404 GCRIHKDTEMAAFVADRILEMDSSS 428



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 185/376 (49%), Gaps = 3/376 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K    L + Q+FD+  +++  TW++++ A+  N  PL  L+ + RM   G+  D   
Sbjct: 69  LYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHI 128

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P   KAC  L+  D G  +H L +K GY    F+ +SLV MYAKC +   AR LFD M 
Sbjct: 129 YPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP 188

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +VV W+ +I  Y+     +EAL LF++     +  N +TF + ++ C  S+F  LG 
Sbjct: 189 ER-NVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGK 247

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +K   +   +V +ALI++Y++CG +  A  V  ++  ++   WNSML    Q+ 
Sbjct: 248 LIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHA 307

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +    F E+   G KP+ +  ++ + A    G +  G+E  +     G   + +   
Sbjct: 308 HTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYA 367

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAG-YAQNNCHLKALELFRTVQLEGL 358
           +L+D+  +   +     V  QM  +   S W  ++ G     +  + A    R ++++  
Sbjct: 368 SLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSS 427

Query: 359 DADVMIIGSVLMACSG 374
            + + ++ S   A +G
Sbjct: 428 SSGLHVLLSNAYAAAG 443



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 141/276 (51%), Gaps = 4/276 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + DA  LFD++ +R V +W+ M+  Y    + +  L  + +  +  + V+ FT
Sbjct: 170 MYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFT 229

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VI+ C+    L+ G  IHGL LK  +DS+ F+ ++L+++Y+KC     A Q+FD + 
Sbjct: 230 FSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIP 289

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + ++ LWNS++ A +         GLF EM  VG+  N  +F++ L AC  +     G 
Sbjct: 290 TR-NLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGR 348

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG-FVQ 238
           E  +     G   +     +L+ +  R GK+ EA  V+ Q+  + + S W ++LTG  + 
Sbjct: 349 EYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIH 408

Query: 239 NDLYCKAMQFFRELQ-GAGQKPDQVCTVNAVSASGR 273
            D    A    R L+  +      V   NA +A+GR
Sbjct: 409 KDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGR 444



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 183/368 (49%), Gaps = 7/368 (1%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           + L  G ++H  +LK G  +   + ++L+ +Y+K      + Q+FD   +K     W+S+
Sbjct: 39  RSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTT-WSSV 97

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           ISA++ +   L AL  FR M   G+  + + + +A +AC       +G  +H   VK+G 
Sbjct: 98  ISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGY 157

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
              V+V ++L+ MYA+CG++ +A  +  ++  ++ VSW+ M+ G+ Q D   +A+  F++
Sbjct: 158 YCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQ 217

Query: 252 --LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
             ++          +V  V +S     L  GK +H   +K  F S   +G+ L+ +Y+KC
Sbjct: 218 ALIEDVDVNDFTFSSVIRVCSSSTFLEL--GKLIHGLCLKMSFDSSSFVGSALISLYSKC 275

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             +    +VF ++  ++   W +++   AQ+    +   LF  +   G+  + +   SVL
Sbjct: 276 GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVL 335

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            ACS    + + +E    +   G+  +     ++VD+ G+ G +  + +V + +  +   
Sbjct: 336 YACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTE 395

Query: 429 S-WTSMIS 435
           S W ++++
Sbjct: 396 SVWGALLT 403



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/121 (20%), Positives = 59/121 (48%)

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           +N+ + E +   + + L + +    L++G +L+  I++ G      V+ +L+++Y++   
Sbjct: 16  LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
              + +VF+    K    W+S+I+A   +    +A+  F +M  +   PD   + +   A
Sbjct: 76  PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135

Query: 573 C 573
           C
Sbjct: 136 C 136


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/678 (33%), Positives = 376/678 (55%), Gaps = 15/678 (2%)

Query: 164 VAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN 223
           V  +Q+C        G  IH    + G    VYV+N L+ MY +CG + EA  V      
Sbjct: 38  VRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNG 280
           K+  SW  ++T   Q+    +A+  F E+   G +P  V     +NA SA      L  G
Sbjct: 98  KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEF--LPAG 155

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           + LHA   + GF   +    +L+ MY+KC  +    + F  MT  + +SW  +IA +A+ 
Sbjct: 156 RALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAE- 214

Query: 341 NCHLKALELFRTVQ---LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV 397
             H + LE  RT+Q   LEG+ A  +   +++ A      +   + IH  I+R G  D  
Sbjct: 215 --HRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGF-DQD 271

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           ++N I+++YGKCG +  +  +F+S+   DV++W +MI++Y  +G  +EAL  + LM E  
Sbjct: 272 VVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEG 331

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           V  D  T VS + A ++L  ++ GK+++  +  + F +   +A+SLV+MY +CG LD+A 
Sbjct: 332 VVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVT-ELANSLVNMYGKCGILDVAR 390

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            +F+    K  + W +MI A   H   + A +LF  M  +   P +ITF+++L AC+++G
Sbjct: 391 SIFDKT-AKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAG 449

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L  E   +   M+ D+ + P   HY C+V+ LG+A  L +A   ++ M  EP    W + 
Sbjct: 450 LPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSF 509

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           L  CR H + + G+  AK  + +DP     YV ++ + A +  +++  ++R  M   G++
Sbjct: 510 LANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIR 569

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K  G S I++G  ++ F A D+S+  S EI+ +L  + ++++R  GY      V H+VE 
Sbjct: 570 KNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKR-AGYDPDMTHVAHDVEA 628

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
            +K  +L+ HSERLAIA+G++ +++G+ +RI KNLRVC DCH+  KL S++  RE++VRD
Sbjct: 629 GQKEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRD 688

Query: 818 ANRFHHFEAGVCSCGDYW 835
           +NRFHHF+ G CSC D+W
Sbjct: 689 SNRFHHFKNGSCSCKDFW 706



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 266/535 (49%), Gaps = 20/535 (3%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           VI++CA L  L  G +IH L+ + G  S  ++ N LV MY KC    +AR +F+    K 
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAK- 98

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE-DSSFETLGMEI 182
           +V  W  +I+  +  G+  EAL LF EM + G+  ++ +F AA+ AC     F   G  +
Sbjct: 99  NVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRAL 158

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA   + G    V    +L++MY++CG + E+      +   ++VSWN+M+  F ++   
Sbjct: 159 HALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRG 218

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            +A++  +++   G +   V  +  +SA  +   L + + +H   ++ GF  D  + N +
Sbjct: 219 LEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGF--DQDVVNVI 276

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           ++MY KC C+     +F  M+  D I+W T+IA Y+Q+    +AL  +  +Q EG+  D 
Sbjct: 277 LNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDD 336

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
               SV+ AC+ L  M   K++H  +  +      + N++V++YGKCG +D +R++F+  
Sbjct: 337 YTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTELANSLVNMYGKCGILDVARSIFDKT 396

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
            +K  V+W +MI +Y  +    +A ELF LM     E   IT +S LSA ++  +    +
Sbjct: 397 -AKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGL---PE 452

Query: 483 ELNGFII----RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINA 537
           E + + +      G    G     +V+   + G L  A  +   +    D++ WTS +  
Sbjct: 453 EAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLAN 512

Query: 538 NGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
              HG   RGK A     +++ E+       ++AL    + +G   E  +  ++M
Sbjct: 513 CRSHGDMKRGKFAAKGAIRIDPEA----STGYVALARIHADAGDFQEASRIRKLM 563



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 227/453 (50%), Gaps = 25/453 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ +A  +F+    + VF+W  ++     +G     L  +  M   GI   + +
Sbjct: 78  MYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVS 137

Query: 61  FPCVIKACAMLKD-LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F   I AC+   + L  G  +H L+ + G+        SLV+MY+KC    ++ + F+ M
Sbjct: 138 FTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESM 197

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E  + V WN++I+A++   + LEAL   ++M   G+   + T++  + A +  S     
Sbjct: 198 TEL-NAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSA 256

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH   +++G +    V N ++ MY +CG + +A  +   +   D ++WN+M+  + Q+
Sbjct: 257 RYIHDCILRTGFDQD--VVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQH 314

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A++F+  +Q  G  PD    V+ + A   LG++  GK++H     + F    ++ 
Sbjct: 315 GHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAF-QVTELA 373

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N+L++MY KC  ++ + R  +  TA+  ++W  +I  YAQ++   +A ELF  ++L+G +
Sbjct: 374 NSLVNMYGKCGILD-VARSIFDKTAKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEE 432

Query: 360 ADVMIIGSVLMAC--SGLK--------CMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKC 409
              +   SVL AC  +GL         CM Q    HG  +R G         +V+  GK 
Sbjct: 433 PSYITFMSVLSACANAGLPEEAHSYFVCMQQD---HG--VRPGGGH---YGCMVESLGKA 484

Query: 410 GNIDYSRNVFESIE-SKDVVSWTSMISSYVHNG 441
           G +  +  + + +    DV++WTS +++   +G
Sbjct: 485 GRLSDAEALIQGMPFEPDVLTWTSFLANCRSHG 517



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 172/339 (50%), Gaps = 13/339 (3%)

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
           DAD+     V+ +C+ L  +++ + IH  I R GL SD+ + N +V +YGKCG+++ +R 
Sbjct: 31  DADLKECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARL 90

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS-LS 476
           VFE+  +K+V SWT +I+    +G + EAL LFY M +  ++  S++  +A++A S+   
Sbjct: 91  VFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPE 150

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L  G+ L+  + R GF       +SLV MY++CG+L+ + K F  +   + + W +MI 
Sbjct: 151 FLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIA 210

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQL 595
           A   H RG  A+    KM  E      +T++ L+ A      +   +   + I+R  +  
Sbjct: 211 AFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQ 270

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           D        ++++ G+   L++A    +SM  +P    W  ++ A   H +     +   
Sbjct: 271 DV----VNVILNMYGKCGCLQDAEAMFKSMS-QPDVIAWNTMIAAYSQHGHTSEA-LRFY 324

Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVE---QVRMRM 691
           +L++ +   P +Y  +S V  A     D+E   QV  R+
Sbjct: 325 ELMQEEGVVPDDYTYVS-VIDACATLGDMEVGKQVHRRL 362


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 212/579 (36%), Positives = 349/579 (60%), Gaps = 3/579 (0%)

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           +P++      ++    L  L  G+ +HA+     F  DL + N +++MYAKC  +     
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           +F +M  +D +SWT +I+GY+Q+    +AL LF  +   G   +   + S+L A      
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221

Query: 378 MSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
               +++H + ++ G   ++ + ++++D+Y +  ++  ++ +F S+ +K+VVSW ++I+ 
Sbjct: 222 DHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           +   G     + LF  M     E    T  S  +A +S   L++GK ++  +I+ G    
Sbjct: 282 HARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPI 341

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             + ++L+DMYA+ G++  A KVF  +  +D++ W S+I+    HG G  A+ LF +M  
Sbjct: 342 AYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK 401

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
               P+ ITFL++L ACSHSGL++EG+ + E+M+  ++++    H+  +VDLLGRA  L 
Sbjct: 402 AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLN 460

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EA +F+  M I+PTA VW ALLG+CR+H N +LG   A+++ ELDP + G +VL+SN++A
Sbjct: 461 EANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYA 520

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           ++ +  D  +VR  M+ SG+KK P  SW+EI N++H F+A D SH   +EI +   +I+ 
Sbjct: 521 SAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISG 580

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           K+ +E GYV  T  VL  + ++++   L  HSE+LA+A+ VLK+  G  IRI KN+R+C 
Sbjct: 581 KI-KEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICG 639

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCHS  K  SR+ GRE++VRD NRFHHF  G+CSC DYW
Sbjct: 640 DCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 202/401 (50%), Gaps = 20/401 (4%)

Query: 38  EPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN 97
           EP R L  YS+M               +  C  L+ L  G  IH  +    ++    ++N
Sbjct: 102 EPERTL--YSKM---------------LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLN 144

Query: 98  SLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
            ++ MYAKC    +A+ LFD+M  K D+V W  +IS YS SGQ  EAL LF +M  +G  
Sbjct: 145 FILNMYAKCGSLEEAQDLFDKMPTK-DMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            N +T  + L+A      +  G ++HA ++K G ++ V+V ++L+ MYAR   M EA  +
Sbjct: 204 PNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVI 263

Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNL 277
              L  K+ VSWN+++ G  +       M+ F ++   G +P      +  +A    G+L
Sbjct: 264 FNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSL 323

Query: 278 LNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
             GK +HA+ IK G      IGNTL+DMYAK   +    +VF ++  QD +SW +II+GY
Sbjct: 324 EQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGY 383

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV 397
           AQ+    +AL+LF  +    +  + +   SVL ACS    + + +     + +  +   V
Sbjct: 384 AQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQV 443

Query: 398 ILN-AIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
             +  +VD+ G+ G ++ +    E +  K   + W +++ S
Sbjct: 444 AHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGS 484



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 187/376 (49%), Gaps = 3/376 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ +A+ LFDK+  + + +W  ++  Y  +G+    L  + +M  LG   + FT
Sbjct: 149 MYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFT 208

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++KA         G ++H   LK GYD    + +SL+ MYA+    R+A+ +F+ + 
Sbjct: 209 LSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +VV WN++I+ ++  G+    + LF +M R G     +T+ +   AC  S     G 
Sbjct: 269 AK-NVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGK 327

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KSG     Y+ N LI MYA+ G + +A  V  +L  +D VSWNS+++G+ Q+ 
Sbjct: 328 WVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG 387

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  +A+Q F ++  A  +P+++  ++ ++A    G L  G+       K    + +    
Sbjct: 388 LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHV 447

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAG-YAQNNCHLKALELFRTVQLEGL 358
           T++D+  +   +N   +   +M  +   + W  ++       N  L      +  +L+  
Sbjct: 448 TVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPH 507

Query: 359 DADVMIIGSVLMACSG 374
           D+   ++ S + A +G
Sbjct: 508 DSGPHVLLSNIYASAG 523



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 8/283 (2%)

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           L+N  ++E +       L+  + L  LK+G+ ++  I    F  +  + + +++MYA+CG
Sbjct: 95  LINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCG 154

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
           +L+ A  +F+ + TKD++ WT +I+     G+   A+ LF KM    F P+  T  +LL 
Sbjct: 155 SLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLK 214

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           A S +G  +   + L      Y  D      + L+D+  R  H+ EA     S+  +   
Sbjct: 215 A-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 273

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLE-LDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
             W AL+     H+ K  GE V +  L+ L  G    +   S+VF A      +EQ +  
Sbjct: 274 S-WNALIAG---HARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWV 329

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
              + + K+ G     IGN +    A+  S  ++ +++++L +
Sbjct: 330 H--AHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVK 370


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/766 (32%), Positives = 413/766 (53%), Gaps = 83/766 (10%)

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAY----SASGQCLEALGLFREMQRVGLVTNAYTFV 164
           F  + ++F+ +    +   WN+I+ A+    ++  Q L    LF          ++YT+ 
Sbjct: 54  FHYSLRIFNHL-RNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAK---PDSYTYP 109

Query: 165 AALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
             LQ C     E  G ++HA  V SG +  VYV N L+ +YA CG +  A  V  +    
Sbjct: 110 ILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVL 169

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
           D VSWN++L G+VQ     +A + F  +      P++    N +++              
Sbjct: 170 DLVSWNTLLAGYVQAGEVEEAERVFEGM------PER----NTIAS-------------- 205

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ--DFISWTTIIAGYAQNNC 342
                          N+++ ++ +  CV    R+F  +  +  D +SW+ +++ Y QN  
Sbjct: 206 ---------------NSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEM 250

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NA 401
             +AL LF  ++  G+  D +++ S L ACS +  +   + +HG  ++ G+ D V L NA
Sbjct: 251 GEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNA 310

Query: 402 IVDVYGKCGNIDYSRNVFE--------------------------------SIESKDVVS 429
           ++ +Y  CG I  +R +F+                                S+  KDVVS
Sbjct: 311 LIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVS 370

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           W++MIS Y  +   +EAL LF  M    V  D   LVSA+SA + L+ L  GK ++ +I 
Sbjct: 371 WSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYIS 430

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           R    +   ++++L+DMY +CG ++ A +VF  ++ K +  W ++I    ++G  + +++
Sbjct: 431 RNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLN 490

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLL 609
           +F  M+     P+ ITF+ +L AC H GL+N+G+ +   M  +++++   +HY C+VDLL
Sbjct: 491 MFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLL 550

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV 669
           GRA  L+EA + + SM + P    W ALLGACR H + E+GE + +KL++L P + G +V
Sbjct: 551 GRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHV 610

Query: 670 LISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYK 729
           L+SN++A+   W +V ++R  M   G+ KTPG S IE    +H F+A DK+H + ++I  
Sbjct: 611 LLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEH 670

Query: 730 KLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRIT 789
            L  +  KL+ E GYV  T  V  +++EEEK   L+ HSE+LA+A+G++  +  + IR+T
Sbjct: 671 MLDVVAAKLKIE-GYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVT 729

Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           KNLR+C DCH+  KL+S+ F R++VVRD +RFHHF+ G CSC D+W
Sbjct: 730 KNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 152/598 (25%), Positives = 278/598 (46%), Gaps = 84/598 (14%)

Query: 13  QLFDKVSQRTVFTWNAMLGA--YVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           ++F+ +     FTWN ++ A  Y+ N  P + L  Y          D++T+P +++ CA 
Sbjct: 59  RIFNHLRNPNTFTWNTIMRAHLYLQNS-PHQALLHYKLFLASHAKPDSYTYPILLQCCAA 117

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
                 G ++H   +  G+D   ++ N+L+ +YA C     AR++F+      D+V WN+
Sbjct: 118 RVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEE-SPVLDLVSWNT 176

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +++ Y  +G+  EA  +F  M     +                                 
Sbjct: 177 LLAGYVQAGEVEEAERVFEGMPERNTIA-------------------------------- 204

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNSMLTGFVQNDLYCKAMQF 248
                  +N++IA++ R G + +A  +   +    +D VSW++M++ + QN++  +A+  
Sbjct: 205 -------SNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVL 257

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG---FVS----------- 294
           F E++G+G   D+V  V+A+SA  R+ N+  G+ +H  A+K G   +VS           
Sbjct: 258 FVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSS 317

Query: 295 ------------------DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
                             DL   N+++  Y +C  +     +FY M  +D +SW+ +I+G
Sbjct: 318 CGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISG 377

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL 396
           YAQ+ C  +AL LF+ +QL G+  D   + S + AC+ L  +   K IH YI R  L   
Sbjct: 378 YAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVN 437

Query: 397 VILN-AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           VIL+  ++D+Y KCG ++ +  VF ++E K V +W ++I     NG   ++L +F  M +
Sbjct: 438 VILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKK 497

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGAL 513
                + IT +  L A   + ++  G+     +I +   +E ++     +VD+  R G L
Sbjct: 498 TGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHE-HKIEANIKHYGCMVDLLGRAGLL 556

Query: 514 DIANKVFNCVQ-TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
             A ++ + +    D+  W +++ A   H   ++   L  K+      PDH  F  LL
Sbjct: 557 KEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKL--IQLQPDHDGFHVLL 612



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 207/462 (44%), Gaps = 83/462 (17%)

Query: 162 TFVAALQACE-DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE---AAGV 217
           T  + LQ+C+    F+    ++ + T+ +G     Y A+ LI   +    +     +  +
Sbjct: 5   TLDSLLQSCKCPRHFK----QLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRI 60

Query: 218 LYQLENKDSVSWNSMLTG--FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
              L N ++ +WN+++    ++QN  + +A+  ++    +  KPD       +       
Sbjct: 61  FNHLRNPNTFTWNTIMRAHLYLQNSPH-QALLHYKLFLASHAKPDSYTYPILLQCCAARV 119

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +   G++LHA+A+  GF  D+ + NTLM++YA C  V    RVF +    D +SW T++A
Sbjct: 120 SEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLA 179

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
           GY Q     +A  +F     EG+                                    +
Sbjct: 180 GYVQAGEVEEAERVF-----EGMPE---------------------------------RN 201

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNGLANEALELFYLM 453
            +  N+++ ++G+ G ++ +R +F  +    +D+VSW++M+S Y  N +  EAL LF  M
Sbjct: 202 TIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEM 261

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYA----- 508
             + V  D + +VSALSA S +  ++ G+ ++G  ++ G     S+ ++L+ +Y+     
Sbjct: 262 KGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEI 321

Query: 509 ---------------------------RCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
                                      RCG++  A  +F  +  KD++ W++MI+    H
Sbjct: 322 VDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQH 381

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
                A+ LF +M+     PD    ++ + AC+H   ++ GK
Sbjct: 382 ECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGK 423



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 153/315 (48%), Gaps = 33/315 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVS--QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           ++G+ G V  A ++F+ V   +R + +W+AM+  Y  N      L  +  M+  G++VD 
Sbjct: 211 LFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDE 270

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
                 + AC+ + +++ G  +HGL +K G +    + N+L+ +Y+ C +   AR++FD 
Sbjct: 271 VVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDD 330

Query: 119 MGEKEDVVLWNSIISAYSASG------------------------------QCL-EALGL 147
            GE  D++ WNS+IS Y   G                              +C  EAL L
Sbjct: 331 GGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALAL 390

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           F+EMQ  G+  +    V+A+ AC   +   LG  IHA   ++   + V ++  LI MY +
Sbjct: 391 FQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMK 450

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
           CG +  A  V Y +E K   +WN+++ G   N    +++  F +++  G  P+++  +  
Sbjct: 451 CGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGV 510

Query: 268 VSASGRLGNLLNGKE 282
           + A   +G + +G+ 
Sbjct: 511 LGACRHMGLVNDGRH 525


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/716 (31%), Positives = 390/716 (54%), Gaps = 8/716 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G + DA +LF ++    V  WN M+  +   G     +  +  ++  G+     + 
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ A A L  L+ G+ +H   +K G D   ++ ++LV MYAKC     A+Q+F+ +GE
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + ++VLWN+++  ++ +G   E +  F  M+R G   + +TF +   AC    +   G +
Sbjct: 373 R-NIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQ 431

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +K+     ++VANAL+ MYA+ G + EA      ++  D+VSWN+++ G+VQ + 
Sbjct: 432 LHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEY 491

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A   FR +   G  PD+V   + VSA   +     G++ H   +K G  +    G++
Sbjct: 492 NDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSS 551

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-ALELFRTVQLEGLDA 360
           L+DMY KC  V     VFY M  ++ +S   +IAGY  +  HL+ A+ LF+ +Q+ GL  
Sbjct: 552 LIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMS--HLEEAIHLFQEIQMVGLKP 609

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNV 418
             +    +L  C G   ++  ++IHG +++ G   S  ++  +++ +Y        S  +
Sbjct: 610 TEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETL 669

Query: 419 FESIE-SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           F  ++  K +V WT++IS Y       +AL+ +  M   N+  D  T  S L A + +S 
Sbjct: 670 FSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSS 729

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMIN 536
           L+ G+E++  I   GFN++    SSL+DMYA+CG +  + +VF+ +  ++ +I W SMI 
Sbjct: 730 LQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIV 789

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
               +G  + A+++F +ME +S  PD +TFL +L ACSH+G ++EG+K  ++M  +Y+L 
Sbjct: 790 GLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQ 849

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  +H  C+VD+LGR   L EA +F+  +  +    +W  LLGACR H ++  G+  A K
Sbjct: 850 PRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANK 909

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
           L+EL P +  +YVL+S ++A S  W   + +R  M+  G+KK PG SWIE G  + 
Sbjct: 910 LMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKLKGVKKLPGYSWIEPGRDVQ 965



 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 190/689 (27%), Positives = 332/689 (48%), Gaps = 73/689 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG+V  A++ F ++ ++ VF WN++L  Y+ +G    V++++  M   G+  + FT
Sbjct: 85  LYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFT 144

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ AC+ L+D++ G ++H  V K G+    F    L+ MYAKC + R AR +FD   
Sbjct: 145 FAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDG-A 203

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V W ++I+ Y   G  +EA+ +F +MQRVG V +    V  + A           
Sbjct: 204 LNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA----------- 252

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
                                   Y   G++ +A  +  Q+ N + V+WN M++G  +  
Sbjct: 253 ------------------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRG 288

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+ FF EL+  G K  +    + +SA   L  L  G  +HA AIK+G   ++ +G+
Sbjct: 289 FAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGS 348

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++MYAKC  ++   +VF  +  ++ + W  ++ G+AQN    + +E F  ++  G   
Sbjct: 349 ALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQP 408

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
           D     S+  AC+ L  +    ++H  +I+ K  S+L + NA+VD+Y K G +  +R  F
Sbjct: 409 DEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQF 468

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           E ++  D VSW ++I  YV     +EA  +F  M    V  D ++L S +SA +++   K
Sbjct: 469 EFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFK 528

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
           +G++ +  +++ G +      SSL+DMY +CG +  A  VF  +  ++++   ++I A  
Sbjct: 529 QGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALI-AGY 587

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK---------FL---- 586
                + AI LF +++     P  +TF  LL  C  + ++N G++         FL    
Sbjct: 588 TMSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSE 647

Query: 587 -------------------EIMRCDYQLDPWPEHYACLVDLLGRANHLEEA---YQFVRS 624
                              E +  + Q       +  L+    + NH E+A   YQ +RS
Sbjct: 648 MVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRS 707

Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIV 653
             I P    + ++L AC   S+ + G+ V
Sbjct: 708 DNILPDQATFASVLRACAGMSSLQTGQEV 736



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 180/586 (30%), Positives = 307/586 (52%), Gaps = 15/586 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC  +  A+Q+F+ + +R +  WNAMLG +  NG    V+E +S M+  G   D FT
Sbjct: 353 MYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFT 412

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +  ACA L  LD G ++H +++K  + S  F+ N+LV MYAK    ++AR+ F+ M 
Sbjct: 413 FTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFM- 471

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  D V WN+II  Y       EA  +FR M   G++ +  +  + + AC +      G 
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQ 531

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           + H   VK G +      ++LI MY +CG +  A  V Y +  ++ VS N+++ G+  + 
Sbjct: 532 QCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSH 591

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ-IG 299
           L  +A+  F+E+Q  G KP +V     +        L  G+++H   +K GF+S  + + 
Sbjct: 592 LE-EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVC 650

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            +L+ MY           +F ++   +  + WT +I+GYAQ N H KAL+ ++ ++ + +
Sbjct: 651 VSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNI 710

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D     SVL AC+G+  +   +E+H  I   G + D +  ++++D+Y KCG++  S  
Sbjct: 711 LPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQ 770

Query: 418 VFESIESKD-VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           VF  +  ++ V+SW SMI     NG A EALE+F  M + ++  D +T +  LSA S   
Sbjct: 771 VFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAG 830

Query: 477 ILKKGKELNGFIIRKGFNLEGSV--ASSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
            + +G+++   ++   + L+  V     +VD+  R G L+ A +  N +  K D +LW++
Sbjct: 831 RVSEGRKVFDLMVNN-YKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWST 889

Query: 534 MINANGLHG---RGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
           ++ A   HG   RGK A +   +++ +S        L+ LYA S +
Sbjct: 890 LLGACRKHGDEVRGKRAANKLMELKPQS--SSSYVLLSGLYAESEN 933



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 176/645 (27%), Positives = 305/645 (47%), Gaps = 49/645 (7%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KC ++ DA  +FD        +W  ++  YV +G P+  ++ + +M+ +G   D   
Sbjct: 186 MYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIA 245

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI A   L  L                                     AR+LF ++ 
Sbjct: 246 LVTVINAYVALGRL-----------------------------------ADARKLFTQI- 269

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              +VV WN +IS ++  G   EA+  F E+++ GL     +  + L A    S    G 
Sbjct: 270 PNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGS 329

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +K G +  VYV +AL+ MYA+C KM  A  V   L  ++ V WN+ML GF QN 
Sbjct: 330 MVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNG 389

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           L  + M+FF  ++  G +PD+    +  SA   L  L  G +LH   IK  F S+L + N
Sbjct: 390 LAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVAN 449

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMYAK   +    + F  M   D +SW  II GY Q   + +A  +FR +   G+  
Sbjct: 450 ALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLP 509

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D + + S++ AC+ +K   Q ++ H  +++ GL +     ++++D+Y KCG +  +R+VF
Sbjct: 510 DEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVF 569

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            S+  ++VVS  ++I+ Y  + L  EA+ LF  +    ++   +T    L       +L 
Sbjct: 570 YSMPYRNVVSINALIAGYTMSHL-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLN 628

Query: 480 KGKELNGFIIRKGFNLEGS--VASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
            G++++G +++ GF L  S  V  SL+ MY        +  +F+ +Q  K L++WT++I+
Sbjct: 629 LGRQIHGQVMKWGF-LSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALIS 687

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQL 595
                   + A+  +  M +++  PD  TF ++L AC+    +  G++    I    + +
Sbjct: 688 GYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNM 747

Query: 596 DPWPEHYAC--LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
           D       C  L+D+  +   ++ + Q    M    +   W +++
Sbjct: 748 D----EITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMI 788



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 250/520 (48%), Gaps = 37/520 (7%)

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV 125
           K  A+L+ L     IH   LK G      + N +V +Y KC +   A++ F R+ EK+DV
Sbjct: 49  KPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRL-EKKDV 107

Query: 126 VLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAA 185
             WNS++S Y   G     +  F  M   G+  N +TF   L AC        G ++H  
Sbjct: 108 FAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCG 167

Query: 186 TVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKA 245
             K G   + +    LI MYA+C  + +A  V     N D+VSW +++ G+V++    +A
Sbjct: 168 VFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEA 227

Query: 246 MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDM 305
           ++ F ++Q  G  PDQ+  V  ++A   LG L + ++L                      
Sbjct: 228 VKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKL---------------------- 265

Query: 306 YAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMII 365
                        F Q+   + ++W  +I+G+A+     +A+  F  ++  GL A    +
Sbjct: 266 -------------FTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIES 424
           GSVL A + L  ++    +H   I++GL D V + +A+V++Y KC  +D ++ VF S+  
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
           +++V W +M+  +  NGLA E +E F  M     + D  T  S  SA +SL  L  G +L
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 485 NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRG 544
           +  +I+  F     VA++LVDMYA+ GAL  A K F  ++  D + W ++I         
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 545 KVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
             A  +F +M +    PD ++  +++ AC++     +G++
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQ 532



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 12/251 (4%)

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           L+ +S  K IH   ++ G+    +L N IVD+Y KCGN+D+++  F  +E KDV +W S+
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           +S Y+ +GL    ++ F  M    V  +  T    LSA S L  +  GK+++  + + GF
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGF 173

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
                    L+DMYA+C  L  A  VF+     D + WT++I      G    A+ +F K
Sbjct: 174 GFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDK 233

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKK-FLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           M+     PD I  + ++ A    G + + +K F +I        P P   A  V + G A
Sbjct: 234 MQRVGHVPDQIALVTVINAYVALGRLADARKLFTQI--------PNPNVVAWNVMISGHA 285

Query: 613 NH--LEEAYQF 621
                EEA  F
Sbjct: 286 KRGFAEEAISF 296


>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
 gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/526 (40%), Positives = 335/526 (63%), Gaps = 3/526 (0%)

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           +NY   +F  +       + T+I GY       +AL  +  +   G + D      +L A
Sbjct: 82  MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141

Query: 372 CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           C+ LK + + K+IHG + + GL +D+ + N+++++YG+CG ++ S  VFE +ESK   SW
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201

Query: 431 TSMISSYVHNGLANEALELFYLM-NEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           +SM+S+    G+ +E L LF  M +E N++++   +VSAL A ++   L  G  ++GF++
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 261

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
           R    L   V +SLVDMY +CG LD A  +F  ++ ++ + +++MI+   LHG G+ A+ 
Sbjct: 262 RNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALR 321

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLL 609
           +F KM  E   PDH+ ++++L ACSHSGL+ EG++    M  + +++P  EHY CLVDLL
Sbjct: 322 MFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLL 381

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV 669
           GRA  LEEA + ++S+ IE    +W   L  CRV  N ELG+I A++LL+L   NPG+Y+
Sbjct: 382 GRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYL 441

Query: 670 LISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYK 729
           LISN+++  + W DV + R  +   GLK+TPG S +E+  K H F+++D+SH +  EIYK
Sbjct: 442 LISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYK 501

Query: 730 KLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRIT 789
            L ++  +L+ EG     TQ +L NV+EEEK + L GHS+++AIA+G+L +  GS+I+I 
Sbjct: 502 MLHQMEWQLKFEGYSPDLTQILL-NVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIA 560

Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +NLR+C DCH++ K +S ++ RE+VVRD NRFH F+ G CSC DYW
Sbjct: 561 RNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 158/308 (51%), Gaps = 10/308 (3%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F  +     F +N M+  YV+       L  Y+ M   G   D FT+PC++KAC  
Sbjct: 85  AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           LK +  G +IHG V K G ++  F+ NSL+ MY +C +   +  +F+++ E +    W+S
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL-ESKTAASWSS 203

Query: 131 IISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           ++SA +  G   E L LFR M     L       V+AL AC ++    LGM IH   +++
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN 263

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
              L + V  +L+ MY +CG + +A  +  ++E ++++++++M++G   +     A++ F
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
            ++   G +PD V  V+ ++A    G +  G+ + A  +K+G V          + Y   
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVE------PTAEHYG-- 375

Query: 310 CCVNYMGR 317
           C V+ +GR
Sbjct: 376 CLVDLLGR 383



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 181/332 (54%), Gaps = 8/332 (2%)

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           M  AA +   +++  +  +N+M+ G+V    + +A+ F+ E+   G +PD       + A
Sbjct: 82  MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
             RL ++  GK++H    K G  +D+ + N+L++MY +C  +     VF ++ ++   SW
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           +++++  A      + L LFR +  E  L A+   + S L+AC+    ++    IHG+++
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 261

Query: 390 RKGLSDL--VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           R  +S+L  ++  ++VD+Y KCG +D + ++F+ +E ++ +++++MIS    +G    AL
Sbjct: 262 R-NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESAL 320

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVD 505
            +F  M +  +E D +  VS L+A S   ++K+G+ +   ++++G  +E +      LVD
Sbjct: 321 RMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEG-KVEPTAEHYGCLVD 379

Query: 506 MYARCGALDIANKVFNCVQT-KDLILWTSMIN 536
           +  R G L+ A +    +   K+ ++W + ++
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 4/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
           MYG+CG +  +  +F+K+  +T  +W++M+ A    G     L  +  M     +  +  
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
                + ACA    L+ G  IHG +L+   +    +  SLV MY KC    KA  +F +M
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 295

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            EK + + ++++IS  +  G+   AL +F +M + GL  +   +V+ L AC  S     G
Sbjct: 296 -EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEG 354

Query: 180 MEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
             + A  +K G+          L+ +  R G + EA   +  +   K+ V W + L+
Sbjct: 355 RRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/612 (36%), Positives = 369/612 (60%), Gaps = 10/612 (1%)

Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVC--TVNAVSASGRLGNLLNGKELHAYAIKQ 290
           +  F  N  + +A+ FFR +  +G++PD+V    + A  A      +  G+E+H YA   
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G + ++ +G  ++ MY KC  ++     F ++  ++ ++W  ++  Y  +    +ALELF
Sbjct: 61  GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120

Query: 351 RTV--QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDV 405
           R +  +      D       + ACS L+ + Q +EIH  + R+G     D+V+  A++++
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180

Query: 406 YGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNGLANEALELFYLMNEA-NVESDSI 463
           Y KCG+++ +R VF+SI    D V W +MI++Y  +G   +AL+L+  M++  ++     
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240

Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
           T V+ +   + LS LK+G+ ++  +    F+    V+++LV MY +CG LD A  VF+ +
Sbjct: 241 TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM 300

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           + KD I W ++I++   HG    A+ L+ +M+ +   P  +TF+ LL ACSH GL+ +G 
Sbjct: 301 KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360

Query: 584 KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRV 643
            +   M+ D+++ P   H+ C++DLLGR   L EA   ++SM I+  A  W +LLGAC+ 
Sbjct: 361 DYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKT 420

Query: 644 HSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSS 703
           H + + G   A ++++  P   G YVL+SN++AA+ +WKDVE++R  M   G+KK+PG S
Sbjct: 421 HGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKS 480

Query: 704 WIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
           WIEIG+ +H F++ D+SH + +EIY +L ++ E++ +  GYV  T  V H++EEEEK  +
Sbjct: 481 WIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEM-KGLGYVPDTSSVFHDLEEEEKEDL 539

Query: 764 LYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHH 823
           L  HSE+LAI YG +     S++RI KNLRVC+DCH+  K +SR+ GR++VVRDA RFH 
Sbjct: 540 LVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHL 599

Query: 824 FEAGVCSCGDYW 835
           FE G CSC DYW
Sbjct: 600 FENGSCSCRDYW 611



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 225/433 (51%), Gaps = 16/433 (3%)

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL--GMEIHAATVKS 189
           ++A+S +G   EAL  FR M + G   +  TF   L A        +  G EIH     S
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G    V V  A+I+MY +CG++ +A     +L+ K+SV+WN+M+T +  +    +A++ F
Sbjct: 61  GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120

Query: 250 REL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG--FVSDLQIGNTLMDM 305
           RE+  +    +PD+     A+ A   L +L  G+E+H    ++G     D+ +G  L++M
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180

Query: 306 YAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQ-LEGLDADVM 363
           Y+KC  +    +VF  +    D + W  +IA YAQ+    +AL+L+R++     L     
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240

Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
              +V+  C+ L  + Q + IH  +      ++L++ NA+V +YGKCG +D + +VF S+
Sbjct: 241 TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM 300

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
           + KD +SW ++ISSY ++G +++AL L+  M+   V+   +T V  LSA S   ++  G 
Sbjct: 301 KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360

Query: 483 ELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANG 539
           +   + ++    ++ SV     ++D+  R G L  A  V   +  + + + W S++ A  
Sbjct: 361 DYF-YRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACK 419

Query: 540 LHG---RGKVAID 549
            HG   RG  A D
Sbjct: 420 THGDLKRGVRAAD 432



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 156/285 (54%), Gaps = 5/285 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM--RVLGISVDA 58
           MYGKCG + DA   F+++  +   TWNAM+  Y  +G     LE +  M  R      D 
Sbjct: 75  MYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRSARPDK 134

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYD-STDFIVNS-LVAMYAKCYDFRKARQLF 116
           F+F   I+AC+ L+DL+ G +IH ++ + G +   D +V + L+ MY+KC D  +AR++F
Sbjct: 135 FSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARKVF 194

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSF 175
           D +    D V WN++I+AY+  G+  +AL L+R M     L     TFV  +  C + S 
Sbjct: 195 DSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSA 254

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G  IHA    +  +  + V+NAL+ MY +CG + EA  V + ++ KD +SWN++++ 
Sbjct: 255 LKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISS 314

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           +  +    +A+  ++E+   G KP +V  V  +SA    G + +G
Sbjct: 315 YAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADG 359



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 197/429 (45%), Gaps = 34/429 (7%)

Query: 30  LGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD--LDCGAKIHGLVLKC 87
           + A+  NG     L  + RM   G   D  TF  ++ A A +    +D G +IH      
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 88  GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGL 147
           G      +  ++++MY KC     AR  F+ +  K  V  WN++++ Y   G+  EAL L
Sbjct: 61  GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVT-WNAMMTNYKLDGRDREALEL 119

Query: 148 FREM--QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ--VYVANALIA 203
           FREM  +      + ++F  A++AC +      G EIH    + G+ L   V V  AL+ 
Sbjct: 120 FREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLN 179

Query: 204 MYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQ 261
           MY++CG + EA  V   +  + DSV WN+M+  + Q+    +A+  +R +       P Q
Sbjct: 180 MYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQ 239

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
              V  +     L  L  G+ +HA      F ++L + N L+ MY KC C++    VF+ 
Sbjct: 240 GTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHS 299

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
           M  +D ISW TII+ YA +    +AL L++ + L+G+    +    +L ACS        
Sbjct: 300 MKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACS-------- 351

Query: 382 KEIHGYIIRKGL-------------SDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDV 427
              HG ++  GL               +     I+D+ G+ G +  +  V +S+    + 
Sbjct: 352 ---HGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANA 408

Query: 428 VSWTSMISS 436
           V W S++ +
Sbjct: 409 VQWMSLLGA 417



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 7/238 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRT-VFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDA 58
           MY KCG + +A ++FD +        WNAM+ AY  +G   + L+ Y  M     ++   
Sbjct: 180 MYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQ 239

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            TF  VI  CA L  L  G  IH  V    +D+   + N+LV MY KC    +A  +F  
Sbjct: 240 GTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHS 299

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  K+++  WN+IIS+Y+  G   +AL L++EM   G+     TFV  L AC        
Sbjct: 300 MKLKDEIS-WNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVAD 358

Query: 179 GMEIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           G++ +   ++    ++  V +   +I +  R G++ EA  VL  +    ++V W S+L
Sbjct: 359 GLD-YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLL 415


>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
 gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
 gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/701 (34%), Positives = 388/701 (55%), Gaps = 8/701 (1%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           +N+ +    S+G+  +VL T+S M    +  D FTFP ++KACA L+ L  G  IH  VL
Sbjct: 14  FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
             G+ S  +I +SLV +YAK      AR++F+ M E+ DVV W ++I  YS +G   EA 
Sbjct: 74  VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRER-DVVHWTAMIGCYSRAGIVGEAC 132

Query: 146 GLFREMQRVGLVTNAYTFVAALQAC-EDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
            L  EM+  G+     T +  L    E +  + L    H   V  G +  + V N+++ +
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCL----HDFAVIYGFDCDIAVMNSMLNL 188

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           Y +C  + +A  +  Q+E +D VSWN+M++G+       + ++    ++G G +PDQ   
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
             ++S SG + +L  G+ LH   +K GF  D+ +   L+ MY KC       RV   +  
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN 308

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D + WT +I+G  +     KAL +F  +   G D     I SV+ +C+ L        +
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV 368

Query: 385 HGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           HGY++R G + D   LN+++ +Y KCG++D S  +FE +  +D+VSW ++IS Y  N   
Sbjct: 369 HGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDL 428

Query: 444 NEALELFYLMNEANVES-DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
            +AL LF  M    V+  DS T+VS L A SS   L  GK ++  +IR        V ++
Sbjct: 429 CKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTA 488

Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
           LVDMY++CG L+ A + F+ +  KD++ W  +I   G HG+G +A++++ +       P+
Sbjct: 489 LVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPN 548

Query: 563 HITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFV 622
           H+ FLA+L +CSH+G++ +G K    M  D+ ++P  EH AC+VDLL RA  +E+A++F 
Sbjct: 549 HVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFY 608

Query: 623 RSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWK 682
           +     P+ +V   +L ACR +   E+ +I+ + ++EL PG+ G+YV + + FAA ++W 
Sbjct: 609 KENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWD 668

Query: 683 DVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
           DV +   +MR  GLKK PG S IE+  K  +F     SHS+
Sbjct: 669 DVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSD 709



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/523 (29%), Positives = 270/523 (51%), Gaps = 7/523 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G +  A ++F+++ +R V  W AM+G Y   G         + MR  GI     T
Sbjct: 90  LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT 149

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++     +  L C   +H   +  G+D    ++NS++ +Y KC     A+ LFD+M 
Sbjct: 150 LLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM- 205

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ D+V WN++IS Y++ G   E L L   M+  GL  +  TF A+L          +G 
Sbjct: 206 EQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGR 265

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H   VK+G ++ +++  ALI MY +CGK   +  VL  + NKD V W  M++G ++  
Sbjct: 266 MLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA+  F E+  +G         + V++  +LG+   G  +H Y ++ G+  D    N
Sbjct: 326 RAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN 385

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL-D 359
           +L+ MYAKC  ++    +F +M  +D +SW  II+GYAQN    KAL LF  ++ + +  
Sbjct: 386 SLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQ 445

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNV 418
            D   + S+L ACS    +   K IH  +IR  +    +++ A+VD+Y KCG ++ ++  
Sbjct: 446 VDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRC 505

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+SI  KDVVSW  +I+ Y  +G  + ALE++     + +E + +  ++ LS+ S   ++
Sbjct: 506 FDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMV 565

Query: 479 KKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVF 520
           ++G ++   ++R  G        + +VD+  R   ++ A K +
Sbjct: 566 QQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFY 608


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/681 (34%), Positives = 388/681 (56%), Gaps = 6/681 (0%)

Query: 68  CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-DVV 126
           C   K++  G  +H  +LK G  S+ ++ N+ + +YAK      A  LFD + + + D V
Sbjct: 21  CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80

Query: 127 LWNSIISAYSASGQCLE---ALGLFREMQRVG-LVTNAYTFVAALQACEDSSFETLGMEI 182
            WNS+I+A+S +        A+ LFR M R   ++ NA+T      A  + S    G + 
Sbjct: 81  SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H+  VK+G +  VYV ++L+ MY + G + +A  +  ++  +++VSW +M++G+  +D+ 
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
            KA++ F  ++   +  ++    + +SA      +  G+++H+ AIK G ++ + + N L
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANAL 260

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           + MYAKC  ++   R F     ++ I+W+ ++ GYAQ     KAL+LF  +   G+    
Sbjct: 261 VTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSE 320

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFES 421
             +  V+ ACS L  + + K++H +  + G    L +L+A+VD+Y KCG++  +R  FE 
Sbjct: 321 FTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFEC 380

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           ++  DVV WTS+I+ YV NG     L L+  M    V  + +T+ S L A SSL+ L +G
Sbjct: 381 VQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQG 440

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
           K+++  II+ GF LE  + S+L  MY +CG+LD    +F  + ++D+I W +MI+    +
Sbjct: 441 KQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQN 500

Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
           G G  A++LF KM  E   PD +TF+ LL ACSH GL++ G ++ ++M  ++ + P  EH
Sbjct: 501 GHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEH 560

Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELD 661
           YAC+VD+L RA  L EA +F+ S  ++    +W  LLGAC+ H N ELG    +KL+EL 
Sbjct: 561 YACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELG 620

Query: 662 PGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSH 721
                 YVL+S+++ A    ++VE+VR  M+  G+ K PG SWIE+   +H F+  D  H
Sbjct: 621 SPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQH 680

Query: 722 SESDEIYKKLAEITEKLEREG 742
            + DEI  +L  +T+ +  EG
Sbjct: 681 PQVDEIRLELELLTKLMIDEG 701



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 169/547 (30%), Positives = 290/547 (53%), Gaps = 12/547 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQ--RTVFTWNAMLGAYVSNGEPLR---VLETYSRM-RVLGI 54
           +Y K   +  A  LFD ++   +   +WN+++ A+  N         +  + RM R   +
Sbjct: 55  LYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNV 114

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
             +A T   V  A + L D+  G + H + +K G     ++ +SL+ MY K      AR+
Sbjct: 115 IPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARK 174

Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           LFDRM E+ + V W ++IS Y++S    +A+ +F  M+R   + N +   + L A     
Sbjct: 175 LFDRMPER-NTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDV 233

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
           F   G ++H+  +K+G    V VANAL+ MYA+CG + +A        +K+S++W++M+T
Sbjct: 234 FVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVT 293

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
           G+ Q     KA++ F ++  +G  P +   V  ++A   L  ++ GK++H++A K GF  
Sbjct: 294 GYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGL 353

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
            L + + ++DMYAKC  +    + F  +   D + WT+II GY QN  +   L L+  +Q
Sbjct: 354 QLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQ 413

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNID 413
           +E +  + + + SVL ACS L  + Q K++H  II+ G   ++ I +A+  +Y KCG++D
Sbjct: 414 MERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLD 473

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
               +F  + S+DV+SW +MIS    NG  N+ALELF  M    ++ D +T V+ LSA S
Sbjct: 474 DGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACS 533

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-LIL 530
            + ++ +G E    +  + FN+   V   + +VD+ +R G L+ A +          L L
Sbjct: 534 HMGLVDRGWEYFKMMFDE-FNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCL 592

Query: 531 WTSMINA 537
           W  ++ A
Sbjct: 593 WRILLGA 599


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/580 (39%), Positives = 356/580 (61%), Gaps = 5/580 (0%)

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
           Q   Q+C  N + +  R  +L  G +LHA+ +K G  +   + + L+++Y+K     +  
Sbjct: 23  QNYRQIC--NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSL 80

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
           +VF +   +   +W+++I+ +AQN   L AL+ FR +  +G+  D  I  S   AC  L+
Sbjct: 81  QVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLR 140

Query: 377 CMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
                K +H   ++ G   D+ + +++VD+Y KCG I  +R++F+ +  ++VVSW+ MI 
Sbjct: 141 RSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIY 200

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNL 495
            Y       EAL LF      +V+ +  T  S +   SS + L+ GK ++G  ++  F+ 
Sbjct: 201 GYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDS 260

Query: 496 EGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME 555
              V S+L+ +Y++CG ++ A +VF+ + T++L LW SM+ A   H   +    LF +M 
Sbjct: 261 SSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMG 320

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHL 615
                P+ I FL++LYACSH+GL+ +G+++  +MR DY ++P  EHYA LVDLLGRA  L
Sbjct: 321 NVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMR-DYGIEPETEHYASLVDLLGRAGKL 379

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           +EA   ++ M + PT  VW ALL  CR+H + E+   VA ++LE+D  + G +VL+SN +
Sbjct: 380 QEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAY 439

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           AA+ ++++  ++R  +R  G+KK  G SW+E GNK+H+F A D+SH++  EIY+KL E+ 
Sbjct: 440 AAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELE 499

Query: 736 EKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVC 795
           E++E + GYVA T FVL  V+ EEK + +  HSERLAIA+G++    G  IR+ KNLRVC
Sbjct: 500 EEME-KAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVC 558

Query: 796 VDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            DCH+  K +S+  GR L+VRD NRFH FE G CSCGDYW
Sbjct: 559 GDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 194/385 (50%), Gaps = 5/385 (1%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G+++HA  +K G      V++ LI +Y++      +  V  +   K S +W+S+++ F Q
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N+    A+QFFR +   G +PD     +A  A G L     GK +H  A+K G+  D+ +
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G++L+DMYAKC  +     +F +M  ++ +SW+ +I GYAQ +  ++AL LF+   +E +
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
           D +     SV+  CS    +   K IHG  ++    S   + +A++ +Y KCG I+ +  
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ I ++++  W SM+ +   +        LF  M    ++ + I  +S L A S   +
Sbjct: 284 VFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGL 343

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMIN 536
           ++KG+E    +   G   E    +SLVD+  R G L  A  V   +  +    +W +++ 
Sbjct: 344 VEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLT 403

Query: 537 ANGLHGRGKVA---IDLFYKMEAES 558
              +H   ++A    D   +M++ S
Sbjct: 404 GCRIHKDTEMAAFVADRILEMDSSS 428



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 185/376 (49%), Gaps = 3/376 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K    L + Q+FD+  +++  TW++++ A+  N  PL  L+ + RM   G+  D   
Sbjct: 69  LYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHI 128

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P   KAC  L+  D G  +H L +K GY    F+ +SLV MYAKC +   AR LFD M 
Sbjct: 129 YPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP 188

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+ +VV W+ +I  Y+     +EAL LF++     +  N +TF + ++ C  S+F  LG 
Sbjct: 189 ER-NVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGK 247

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   +K   +   +V +ALI++Y++CG +  A  V  ++  ++   WNSML    Q+ 
Sbjct: 248 LIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHA 307

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +    F E+   G KP+ +  ++ + A    G +  G+E  +     G   + +   
Sbjct: 308 HTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYA 367

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTIIAG-YAQNNCHLKALELFRTVQLEGL 358
           +L+D+  +   +     V  QM  +   S W  ++ G     +  + A    R ++++  
Sbjct: 368 SLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSS 427

Query: 359 DADVMIIGSVLMACSG 374
            + + ++ S   A +G
Sbjct: 428 SSGLHVLLSNAYAAAG 443



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 4/276 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + DA  LFD++ +R V +W+ M+  Y    + +  L  + +  +  + V+ FT
Sbjct: 170 MYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFT 229

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VI+ C+    L+ G  IHGL LK  +DS+ F+ ++L+++Y+KC     A Q+FD + 
Sbjct: 230 FSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIP 289

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + ++ LWNS++ A +         GLF EM  VG+  N   F++ L AC  +     G 
Sbjct: 290 TR-NLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGR 348

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG-FVQ 238
           E  +     G   +     +L+ +  R GK+ EA  V+ Q+  + + S W ++LTG  + 
Sbjct: 349 EYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIH 408

Query: 239 NDLYCKAMQFFRELQ-GAGQKPDQVCTVNAVSASGR 273
            D    A    R L+  +      V   NA +A+GR
Sbjct: 409 KDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGR 444



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 183/368 (49%), Gaps = 7/368 (1%)

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           + L  G ++H  +LK G  +   + ++L+ +Y+K      + Q+FD   +K     W+S+
Sbjct: 39  RSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTT-WSSV 97

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           ISA++ +   L AL  FR M   G+  + + + +A +AC       +G  +H   VK+G 
Sbjct: 98  ISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGY 157

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
              V+V ++L+ MYA+CG++ +A  +  ++  ++ VSW+ M+ G+ Q D   +A+  F++
Sbjct: 158 YCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQ 217

Query: 252 --LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
             ++          +V  V +S     L  GK +H   +K  F S   +G+ L+ +Y+KC
Sbjct: 218 ALIEDVDVNDFTFSSVIRVCSSSTFLEL--GKLIHGLCLKMSFDSSSFVGSALISLYSKC 275

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             +    +VF ++  ++   W +++   AQ+    +   LF  +   G+  + +   SVL
Sbjct: 276 GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVL 335

Query: 370 MACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            ACS    + + +E    +   G+  +     ++VD+ G+ G +  + +V + +  +   
Sbjct: 336 YACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTE 395

Query: 429 S-WTSMIS 435
           S W ++++
Sbjct: 396 SVWGALLT 403



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/121 (20%), Positives = 59/121 (48%)

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           +N+ + E +   + + L + +    L++G +L+  I++ G      V+ +L+++Y++   
Sbjct: 16  LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
              + +VF+    K    W+S+I+A   +    +A+  F +M  +   PD   + +   A
Sbjct: 76  PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135

Query: 573 C 573
           C
Sbjct: 136 C 136


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/655 (35%), Positives = 368/655 (56%), Gaps = 34/655 (5%)

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +   + N  +   N +L  F +       +  +  L+  G   D+      + A  +
Sbjct: 68  ALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSK 127

Query: 274 LGNLLNGKELHAYAIKQGFV-SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           L  L  G E+H  A K GF  +D  I + L+ MYA C  +     +F +M+ +D ++W  
Sbjct: 128 LSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNI 187

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           +I GY+QN  +   L+L+  ++  G + D +I+ +VL AC+    +S  K IH +I   G
Sbjct: 188 MIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNG 247

Query: 393 L--------------------------------SDLVILNAIVDVYGKCGNIDYSRNVFE 420
                                              +V+  A++  Y K G +  +R +F+
Sbjct: 248 FRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFD 307

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  KD+V W++MIS Y  +    EAL+LF  M    +  D IT++S +SA +++  L +
Sbjct: 308 RMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQ 367

Query: 481 GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL 540
            K ++ +  + GF     + ++L+DMYA+CG L  A +VF  +  K++I W+SMINA  +
Sbjct: 368 AKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAM 427

Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPE 600
           HG    AI LF++M+ ++  P+ +TF+ +LYACSH+GL+ EG+KF   M  ++++ P  E
Sbjct: 428 HGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQRE 487

Query: 601 HYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLEL 660
           HY C+VDL  RANHL +A + + +M   P   +W +L+ AC+ H   ELGE  A +LLEL
Sbjct: 488 HYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLEL 547

Query: 661 DPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKS 720
           +P + G  V++SN++A  ++W DV  VR  M+  G+ K    S IE+ N++H F+  D+ 
Sbjct: 548 EPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRY 607

Query: 721 HSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKS 780
           H +SDEIYKKL  +  +L +  GY   T  +L ++EEEEK +++  HSE+LA+ YG++  
Sbjct: 608 HKQSDEIYKKLDAVVSQL-KLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGE 666

Query: 781 TEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            + S IRI KNLR+C DCHSF KLVS++   E+V+RD  RFHHF  G+CSC DYW
Sbjct: 667 RKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 223/471 (47%), Gaps = 37/471 (7%)

Query: 7   SVLD-AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           S LD A  LF  +        N +L  +     P   L  Y  +R  G  +D F+FP ++
Sbjct: 63  SALDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLL 122

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           KA + L  L+ G +IHGL  K G+   D FI ++L+AMYA C     AR LFD+M  + D
Sbjct: 123 KAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHR-D 181

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           VV WN +I  YS +      L L+ EM+  G   +A      L AC  +   + G  IH 
Sbjct: 182 VVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQ 241

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF-------- 236
               +G  +  ++  +L+ MYA CG M  A  V  QL +K  V   +ML+G+        
Sbjct: 242 FIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQD 301

Query: 237 --------VQNDLYC---------------KAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
                   V+ DL C               +A+Q F E+Q     PDQ+  ++ +SA   
Sbjct: 302 ARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACAN 361

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           +G L+  K +H YA K GF   L I N L+DMYAKC  +     VF  M  ++ ISW+++
Sbjct: 362 VGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSM 421

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           I  +A +     A+ LF  ++ + ++ + +    VL ACS    + + ++    +I +  
Sbjct: 422 INAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHR 481

Query: 394 --SDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNG 441
                     +VD+Y +  ++  +  + E++    +V+ W S++S+  ++G
Sbjct: 482 ISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHG 532



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 184/397 (46%), Gaps = 42/397 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CG ++DA  LFDK+S R V TWN M+  Y  N     VL+ Y  M+  G   DA  
Sbjct: 160 MYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAII 219

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC---------YD--- 108
              V+ ACA   +L  G  IH  +   G+     I  SLV MYA C         YD   
Sbjct: 220 LCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLP 279

Query: 109 -------------------FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                               + AR +FDRM EK D+V W+++IS Y+ S Q LEAL LF 
Sbjct: 280 SKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEK-DLVCWSAMISGYAESYQPLEALQLFN 338

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EMQR  +V +  T ++ + AC +         IH    K+G    + + NALI MYA+CG
Sbjct: 339 EMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCG 398

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            + +A  V   +  K+ +SW+SM+  F  +     A+  F  ++    +P+ V  +  + 
Sbjct: 399 NLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLY 458

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIG-NTLMDMYAKCCCVNYMGRVFYQMTAQDF- 327
           A    G +  G++  +  I +  +S  +     ++D+Y   C  N++ +    +    F 
Sbjct: 459 ACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLY---CRANHLRKAMELIETMPFP 515

Query: 328 ---ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
              I W ++++   QN+  ++  E   T  LE L+ D
Sbjct: 516 PNVIIWGSLMSA-CQNHGEIELGEFAATRLLE-LEPD 550


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/681 (33%), Positives = 403/681 (59%), Gaps = 10/681 (1%)

Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
           N Y+ + A Q+    S  TL   +H   +KSG +   ++ + LI  Y +CG + EA  + 
Sbjct: 2   NFYSSLIA-QSAHTKSLTTL-RAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLF 58

Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS-ASGRLGNL 277
            +L ++  V+WNSM++  + +    +A++F+  +   G  PD   T +A+S A  +LG +
Sbjct: 59  DELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAY-TFSAISKAFSQLGLI 117

Query: 278 LNGKELHAYAIKQGF-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
            +G+  H  A+  G  V D  + + L+DMYAK   +     VF ++  +D + +T +I G
Sbjct: 118 RHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVG 177

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL 396
           YAQ+    +AL++F  +   G+  +   +  +L+ C  L  +   + IHG +++ GL  +
Sbjct: 178 YAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESV 237

Query: 397 VI-LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           V    +++ +Y +C  I+ S  VF  ++  + V+WTS +   V NG    A+ +F  M  
Sbjct: 238 VASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIR 297

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
            ++  +  TL S L A SSL++L+ G++++   ++ G +      ++L+++Y +CG +D 
Sbjct: 298 CSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDK 357

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A  VF+ +   D++   SMI A   +G G  A++LF +++     P+ +TF+++L AC++
Sbjct: 358 ARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNN 417

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           +GL+ EG +    +R ++ ++   +H+ C++DLLGR+  LEEA   +  ++  P   +W 
Sbjct: 418 AGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWR 476

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
            LL +C++H   E+ E V  K+LEL PG+ G ++L++N++A++ KW  V +++  +R   
Sbjct: 477 TLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLK 536

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           LKK+P  SW+++  ++H+F+A D SH  S EI++ L  + +K+ +  GY   T+FVL ++
Sbjct: 537 LKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKV-KTLGYNPNTRFVLQDL 595

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKST-EGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           +EE+K+  LY HSE+LAIAY + K+    + IRI KNLRVC DCHS+ K VS L GR+++
Sbjct: 596 DEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDII 655

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
            RD+ RFHHF+ G+CSC DYW
Sbjct: 656 ARDSKRFHHFKGGLCSCKDYW 676



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 269/498 (54%), Gaps = 7/498 (1%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +I   A  K L     +H  V+K G+ S  F+ + L+  Y KC    +AR+LFD + 
Sbjct: 4   YSSLIAQSAHTKSLTTLRAVHTNVIKSGF-SYSFLGHKLIDGYIKCGSLAEARKLFDELP 62

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  +V WNS+IS++ + G+  EA+  +  M   G++ +AYTF A  +A         G 
Sbjct: 63  SRH-IVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQ 121

Query: 181 EIHAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             H   V  G + L  +VA+AL+ MYA+  KM +A  V  ++  KD V + +++ G+ Q+
Sbjct: 122 RAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQH 181

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            L  +A++ F ++   G KP++      +   G LG+L+NG+ +H   +K G  S +   
Sbjct: 182 GLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQ 241

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            +L+ MY++C  +    +VF Q+   + ++WT+ + G  QN     A+ +FR +    + 
Sbjct: 242 TSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSIS 301

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            +   + S+L ACS L  +   ++IH   ++ GL  +     A++++YGKCGN+D +R+V
Sbjct: 302 PNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSV 361

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +   DVV+  SMI +Y  NG  +EALELF  +    +  + +T +S L A ++  ++
Sbjct: 362 FDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLV 421

Query: 479 KKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           ++G ++    IR   N+E ++   + ++D+  R   L+ A  +   V+  D++LW +++N
Sbjct: 422 EEGCQIFAS-IRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLN 480

Query: 537 ANGLHGRGKVAIDLFYKM 554
           +  +HG  ++A  +  K+
Sbjct: 481 SCKIHGEVEMAEKVMSKI 498



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 229/438 (52%), Gaps = 4/438 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y KCGS+ +A +LFD++  R + TWN+M+ +++S+G+    +E Y  M + G+  DA+TF
Sbjct: 45  YIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTF 104

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMG 120
             + KA + L  +  G + HGL +  G +  D F+ ++LV MYAK    R A  +F R+ 
Sbjct: 105 SAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVL 164

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK DVVL+ ++I  Y+  G   EAL +F +M   G+  N YT    L  C +      G 
Sbjct: 165 EK-DVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQ 223

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   VKSG    V    +L+ MY+RC  + ++  V  QL+  + V+W S + G VQN 
Sbjct: 224 LIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNG 283

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A+  FRE+      P+     + + A   L  L  G+++HA  +K G   +   G 
Sbjct: 284 REEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGA 343

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+++Y KC  ++    VF  +T  D ++  ++I  YAQN    +ALELF  ++  GL  
Sbjct: 344 ALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVP 403

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYSRNV 418
           + +   S+L+AC+    + +  +I   I      +L I     ++D+ G+   ++ +  +
Sbjct: 404 NGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAML 463

Query: 419 FESIESKDVVSWTSMISS 436
            E + + DVV W ++++S
Sbjct: 464 IEEVRNPDVVLWRTLLNS 481



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 167/336 (49%), Gaps = 4/336 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K   + DA  +F +V ++ V  + A++  Y  +G     L+ +  M   G+  + +T
Sbjct: 146 MYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYT 205

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
             C++  C  L DL  G  IHGLV+K G +S      SL+ MY++C     + ++F+++ 
Sbjct: 206 LACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQL- 264

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  + V W S +     +G+   A+ +FREM R  +  N +T  + LQAC   +   +G 
Sbjct: 265 DYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGE 324

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA T+K G +   Y   ALI +Y +CG M +A  V   L   D V+ NSM+  + QN 
Sbjct: 325 QIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNG 384

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ F  L+  G  P+ V  ++ + A    G +  G ++ A +I+     +L I +
Sbjct: 385 FGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFA-SIRNNHNIELTIDH 443

Query: 301 --TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
              ++D+  +   +     +  ++   D + W T++
Sbjct: 444 FTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLL 479


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/710 (32%), Positives = 381/710 (53%), Gaps = 76/710 (10%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
             +++ Y   G +T A GV  +     +D+V +N+M+TGF  N+    A+  F +++  G
Sbjct: 84  TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKE---LHAYAIKQGFVSDLQIGNTLMDMYAKCCC-- 311
            KPD     + ++    + +  + K+    HA A+K G      + N L+ +Y+KC    
Sbjct: 144 FKPDNFTFASVLAGLALVAD--DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSP 201

Query: 312 --VNYMGRVFYQMTAQDFISWTTIIAGYAQNN---------------------------- 341
             ++   +VF ++  +D  SWTT++ GY +N                             
Sbjct: 202 SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGY 261

Query: 342 ----CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV 397
                + +ALE+ R +   G++ D     SV+ AC+    +   K++H Y++R+      
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH 321

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV------------------- 438
             N++V +Y KCG  D +R +FE + +KD+VSW +++S YV                   
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381

Query: 439 ------------HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
                        NG   E L+LF  M     E        A+ + + L     G++ + 
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441

Query: 487 FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
            +++ GF+   S  ++L+ MYA+CG ++ A +VF  +   D + W ++I A G HG G  
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAE 501

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           A+D++ +M  +   PD IT L +L ACSH+GL+++G+K+ + M   Y++ P  +HYA L+
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLI 561

Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
           DLL R+    +A   + S+  +PTAE+W ALL  CRVH N ELG I A KL  L P + G
Sbjct: 562 DLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDG 621

Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
            Y+L+SN+ AA+ +W++V +VR  MR  G+KK    SWIE+  ++H+F+  D SH E++ 
Sbjct: 622 TYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEA 681

Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEE-EKVQMLYGHSERLAIAYGVLKSTEGSL 785
           +Y  L ++ +++ R  GYV  T FVLH+VE +  K  ML  HSE++A+A+G++K   G+ 
Sbjct: 682 VYIYLQDLGKEMRRL-GYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTT 740

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           IRI KNLR C DCH+F + +S +  R++++RD  RFHHF  G CSCG++W
Sbjct: 741 IRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 150/645 (23%), Positives = 279/645 (43%), Gaps = 135/645 (20%)

Query: 65  IKACAMLK--DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           ++ C  L+   L     +HG ++  G+     I+N L+ +Y K  +   ARQLFD + E 
Sbjct: 19  LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78

Query: 123 E--------------------------------DVVLWNSIISAYSASGQCLEALGLFRE 150
           +                                D V++N++I+ +S +     A+ LF +
Sbjct: 79  DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 151 MQRVGLVTNAYTF---VAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           M+  G   + +TF   +A L    D   E   ++ HAA +KSG      V+NAL+++Y++
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADD--EKQCVQFHAAALKSGAGYITSVSNALVSVYSK 196

Query: 208 CGK----MTEAAGVLYQLENKDSVSWNSMLTGFVQN---DL------------------- 241
           C      +  A  V  ++  KD  SW +M+TG+V+N   DL                   
Sbjct: 197 CASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNA 256

Query: 242 ----------YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
                     Y +A++  R +  +G + D+    + + A    G L  GK++HAY +++ 
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE 316

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY-------------- 337
             S     N+L+ +Y KC   +    +F +M A+D +SW  +++GY              
Sbjct: 317 DFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFK 375

Query: 338 -----------------AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
                            A+N    + L+LF  ++ EG +         + +C+ L     
Sbjct: 376 EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435

Query: 381 TKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVH 439
            ++ H  +++ G  S L   NA++ +Y KCG ++ +R VF ++   D VSW ++I++   
Sbjct: 436 GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQ 495

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
           +G   EA++++  M +  +  D ITL++ L+A S   ++ +G        RK F+   +V
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQG--------RKYFDSMETV 547

Query: 500 ---------ASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMINANGLHGR---GKV 546
                     + L+D+  R G    A  V   +  K    +W ++++   +HG    G +
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGII 607

Query: 547 AIDLFYKMEAESFAPDHI-TFLALLYACSHSGLINEGKKFLEIMR 590
           A D  + +      P+H  T++ L    + +G   E  +  ++MR
Sbjct: 608 AADKLFGL-----IPEHDGTYMLLSNMHAATGQWEEVARVRKLMR 647



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 228/510 (44%), Gaps = 81/510 (15%)

Query: 2   YGKCGSVLDAEQLFDK--VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           Y   G +  A  +F+K  V  R    +NAM+  +  N +    +  + +M+  G   D F
Sbjct: 90  YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149

Query: 60  TFPCVIKACAMLKDLD--CGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD----FRKAR 113
           TF  V+   A++ D +  C  + H   LK G      + N+LV++Y+KC         AR
Sbjct: 150 TFASVLAGLALVADDEKQC-VQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208

Query: 114 QLFDRMGEKED-------------------------------VVLWNSIISAYSASGQCL 142
           ++FD + EK++                               +V +N++IS Y   G   
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268

Query: 143 EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALI 202
           EAL + R M   G+  + +T+ + ++AC  +    LG ++HA  ++  ++   +  N+L+
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLV 327

Query: 203 AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ--------- 253
           ++Y +CGK  EA  +  ++  KD VSWN++L+G+V +    +A   F+E++         
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387

Query: 254 --------GAGQ--------------KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
                   G G+              +P       A+ +   LG   NG++ HA  +K G
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG 447

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F S L  GN L+ MYAKC  V    +VF  M   D +SW  +IA   Q+    +A++++ 
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYE 507

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG-----YIIRKGLSDLVILNAIVDVY 406
            +  +G+  D + + +VL ACS    + Q ++        Y I  G      L   +D+ 
Sbjct: 508 EMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL---IDLL 564

Query: 407 GKCGNIDYSRNVFESIESKDVVS-WTSMIS 435
            + G    + +V ES+  K     W +++S
Sbjct: 565 CRSGKFSDAESVIESLPFKPTAEIWEALLS 594



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 196/480 (40%), Gaps = 113/480 (23%)

Query: 273 RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTT 332
           R  +L   + +H   I  GF     I N L+D+Y K   +NY  ++F +++  D I+ TT
Sbjct: 26  RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85

Query: 333 IIAGY---------------------------------AQNNCHLKALELFRTVQLEGLD 359
           +++GY                                 + NN    A+ LF  ++ EG  
Sbjct: 86  MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145

Query: 360 ADVMIIGSVLMACSGLKCMS----QTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGN--- 411
            D     SVL   +GL  ++    Q  + H   ++ G   +  + NA+V VY KC +   
Sbjct: 146 PDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202

Query: 412 -IDYSRNVFESIESKDVVSWTSM--------------------------------ISSYV 438
            +  +R VF+ I  KD  SWT+M                                IS YV
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
           + G   EALE+   M  + +E D  T  S + A ++  +L+ GK+++ +++R+  +    
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFH 321

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTS------------------------- 533
             +SLV +Y +CG  D A  +F  +  KDL+ W +                         
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381

Query: 534 ----MINANGL--HGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-L 586
               MI  +GL  +G G+  + LF  M+ E F P    F   + +C+  G    G+++  
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
           ++++  +  D        L+ +  +   +EEA Q  R+M    +   W AL+ A   H +
Sbjct: 442 QLLKIGF--DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALIAALGQHGH 498



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 121/279 (43%), Gaps = 56/279 (20%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVS------------------------- 35
           +Y KCG   +A  +F+K+  + + +WNA+L  YVS                         
Sbjct: 329 LYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388

Query: 36  ------NGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
                 NG     L+ +S M+  G     + F   IK+CA+L     G + H  +LK G+
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF 448

Query: 90  DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
           DS+    N+L+ MYAKC    +ARQ+F  M    D V WN++I+A    G   EA+ ++ 
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEARQVFRTM-PCLDSVSWNALIAALGQHGHGAEAVDVYE 507

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL-----QVYVANA---- 200
           EM + G+  +  T +  L AC            HA  V  G+        VY        
Sbjct: 508 EMLKKGIRPDRITLLTVLTACS-----------HAGLVDQGRKYFDSMETVYRIPPGADH 556

Query: 201 ---LIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
              LI +  R GK ++A  V+  L  K +   W ++L+G
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 124/323 (38%), Gaps = 63/323 (19%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V +A Q+F  +      +WNA++ A   +G     ++ Y  M   GI  D  T
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDS--TDFIVNSLVAMYAKCYD-------FRK 111
              V+ AC+    +D G K         +DS  T + +      YA+  D       F  
Sbjct: 521 LLTVLTACSHAGLVDQGRKY--------FDSMETVYRIPPGADHYARLIDLLCRSGKFSD 572

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A  + + +  K    +W +++S     G     LG+    +  GL+              
Sbjct: 573 AESVIESLPFKPTAEIWEALLSGCRVHGNM--ELGIIAADKLFGLIPE-----------H 619

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           D ++  L   +HAAT   GQ  +V          AR  K+    GV  ++    + SW  
Sbjct: 620 DGTYMLLS-NMHAAT---GQWEEV----------ARVRKLMRDRGVKKEV----ACSWIE 661

Query: 232 MLT---GFVQND--------LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           M T    F+ +D        +Y       +E++  G  PD    ++ V + G   ++L  
Sbjct: 662 METQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLT- 720

Query: 281 KELHAYAIKQGF-VSDLQIGNTL 302
              H+  I   F +  L  G T+
Sbjct: 721 --THSEKIAVAFGLMKLPPGTTI 741


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/687 (34%), Positives = 390/687 (56%), Gaps = 8/687 (1%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           T+  +I AC+  + L  G KIH  +L   C YD+   + N +++MY KC   R AR++FD
Sbjct: 69  TYISLICACSSSRSLAQGRKIHDHILNSNCKYDT--ILNNHILSMYGKCGSLRDAREVFD 126

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            M E+ ++V + S+I+ YS +GQ  EA+ L+ +M +  LV + + F + ++AC  SS   
Sbjct: 127 FMPER-NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVG 185

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LG ++HA  +K   +  +   NALIAMY R  +M++A+ V Y +  KD +SW+S++ GF 
Sbjct: 186 LGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245

Query: 238 QNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           Q     +A+   +E+   G   P++    +++ A   L     G ++H   IK     + 
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
             G +L DMYA+C  +N   RVF Q+   D  SW  IIAG A N    +A+ +F  ++  
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYS 415
           G   D + + S+L A +    +SQ  +IH YII+ G L+DL + N+++ +Y  C ++   
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425

Query: 416 RNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
            N+FE   +  D VSW +++++ + +    E L LF LM  +  E D IT+ + L     
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVE 485

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           +S LK G +++ + ++ G   E  + + L+DMYA+CG+L  A ++F+ +  +D++ W+++
Sbjct: 486 ISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTL 545

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I      G G+ A+ LF +M++    P+H+TF+ +L ACSH GL+ EG K    M+ ++ 
Sbjct: 546 IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG 605

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  EH +C+VDLL RA  L EA +F+  M++EP   VW  LL AC+   N  L +  A
Sbjct: 606 ISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAA 665

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           + +L++DP N   +VL+ ++ A+S  W++   +R  M+   +KK PG SWIEI +KIH F
Sbjct: 666 ENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIF 725

Query: 715 IARDKSHSESDEIYKKLAEITEKLERE 741
            A D  H E D+IY  L  I  ++  E
Sbjct: 726 FAEDIFHPERDDIYTVLHNIWSQMLDE 752



 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 168/555 (30%), Positives = 295/555 (53%), Gaps = 12/555 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ DA ++FD + +R + ++ +++  Y  NG+    +  Y +M    +  D F 
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IKACA   D+  G ++H  V+K    S     N+L+AMY +      A ++F  + 
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
            K D++ W+SII+ +S  G   EAL   +EM   G+   N Y F ++L+AC        G
Sbjct: 231 MK-DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYG 289

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH   +KS          +L  MYARCG +  A  V  Q+E  D+ SWN ++ G   N
Sbjct: 290 SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANN 349

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  F +++ +G  PD +   + + A  +   L  G ++H+Y IK GF++DL + 
Sbjct: 350 GYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVC 409

Query: 300 NTLMDMYAKC----CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           N+L+ MY  C    CC N            D +SW TI+    Q+   ++ L LF+ + +
Sbjct: 410 NSLLTMYTFCSDLYCCFNLFEDF---RNNADSVSWNTILTACLQHEQPVEMLRLFKLMLV 466

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
              + D + +G++L  C  +  +    ++H Y ++ GL+ +  I N ++D+Y KCG++  
Sbjct: 467 SECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQ 526

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R +F+S++++DVVSW+++I  Y  +G   EAL LF  M  A +E + +T V  L+A S 
Sbjct: 527 ARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSH 586

Query: 475 LSILKKGKELNGFI-IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWT 532
           + ++++G +L   +    G +      S +VD+ AR G L+ A +  + ++ + D+++W 
Sbjct: 587 VGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWK 646

Query: 533 SMINANGLHGRGKVA 547
           ++++A    G   +A
Sbjct: 647 TLLSACKTQGNVHLA 661



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 189/377 (50%), Gaps = 3/377 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG +  A ++FD++ +    +WN ++    +NG     +  +S+MR  G   DA +
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ A      L  G +IH  ++K G+ +   + NSL+ MY  C D      LF+   
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D V WN+I++A     Q +E L LF+ M       +  T    L+ C + S   LG 
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H  ++K+G   + ++ N LI MYA+CG + +A  +   ++N+D VSW++++ G+ Q+ 
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA-YAIKQGFVSDLQIG 299
              +A+  F+E++ AG +P+ V  V  ++A   +G +  G +L+A    + G     +  
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC 613

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALELFRTVQLEG 357
           + ++D+ A+   +N   R   +M  + D + W T+++    Q N HL        ++++ 
Sbjct: 614 SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP 673

Query: 358 LDADVMIIGSVLMACSG 374
            ++   ++   + A SG
Sbjct: 674 FNSTAHVLLCSMHASSG 690


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/744 (33%), Positives = 395/744 (53%), Gaps = 63/744 (8%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N+ +A  A+  +   AR  F+ M  +     +N++++ Y  +     ALGLFR M    L
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRT-TASYNALLAGYFRNRLPDAALGLFRRMPSRDL 79

Query: 157 VT-NAYTFVAAL--QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            + NA     +L  Q   D++     +    + V     L+ YV + L+A         +
Sbjct: 80  ASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLA---------D 130

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +  Q+  ++ VS+  +L G +      +A + F E+       D V     +S   +
Sbjct: 131 AIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR----DVVAWTAMLSGYCQ 186

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
            G +   + L     K+  VS       ++  YA+   VN   ++F  M  ++ +SWT +
Sbjct: 187 AGRITEARALFDEMPKRNVVS----WTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAM 242

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDA-DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           + GY Q      A ELF  +    + A + M++G                          
Sbjct: 243 LVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVG-------------------------- 276

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
                        +G+ G +D ++ VFE +  +D  +W++MI +Y  N    EAL  F  
Sbjct: 277 -------------FGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFRE 323

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M    V  +  +++S L+  ++L++L  G+E++  ++R  F+++    S+L+ MY +CG 
Sbjct: 324 MLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGN 383

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           LD A +VF+  + KD+++W SMI     HG G+ A+ +F+ M     +PD IT++  L A
Sbjct: 384 LDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTA 443

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CS++G + EG++    M  +  + P  EHY+C+VDLLGR+  +EEA+  +++M +EP A 
Sbjct: 444 CSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAV 503

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           +W AL+GACR+H N E+ E+ AKKLLEL+PGN G YVL+S+++ +  +W+D  ++R  + 
Sbjct: 504 IWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFIS 563

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDK-SHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
              L K+PG SWIE   ++H F + D  +H E   I + L E  + L  E GY A   FV
Sbjct: 564 SRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRIL-EKLDGLLMESGYSADGSFV 622

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           LH+++EE+K   L  HSER A+AYG+LK  EG  IR+ KNLRVC DCHS  KL++++  R
Sbjct: 623 LHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSR 682

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E+V+RDANRFHHF+ G CSC DYW
Sbjct: 683 EIVLRDANRFHHFKDGFCSCRDYW 706



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 31/293 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLRVLETYSRMR 50
           Y + G + +A  LFD++ +R V +W AM+  Y  NGE           P R   +++ M 
Sbjct: 184 YCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML 243

Query: 51  VLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR 110
           V  I          ++  A L +    A     V  C         N+++  + +     
Sbjct: 244 VGYIQAGH------VEDAAELFN----AMPEHPVAAC---------NAMMVGFGQRGMVD 284

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
            A+ +F++M E++D   W+++I AY  +   +EAL  FREM   G+  N  + ++ L  C
Sbjct: 285 AAKTVFEKMRERDDGT-WSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVC 343

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
              +    G E+HAA ++   ++ V+  +ALI MY +CG + +A  V +  E KD V WN
Sbjct: 344 AALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWN 403

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           SM+TG+ Q+ L  +A+  F +++ AG  PD +  + A++A    G +  G+E+
Sbjct: 404 SMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREI 456



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 128/234 (54%), Gaps = 3/234 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           +G+ G V  A+ +F+K+ +R   TW+AM+ AY  N   +  L T+  M   G+  +  + 
Sbjct: 277 FGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++  CA L  LD G ++H  +L+C +D   F V++L+ MY KC +  KA+++F    E
Sbjct: 337 ISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF-E 395

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            +D+V+WNS+I+ Y+  G   +ALG+F +M+  G+  +  T++ AL AC  +     G E
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGRE 455

Query: 182 I-HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           I ++ TV S         + ++ +  R G + EA  ++  +    D+V W +++
Sbjct: 456 IFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A+++F     + +  WN+M+  Y  +G   + L  +  MR+ G+S D  T
Sbjct: 377 MYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGIT 436

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +   + AC+    +  G +I + + +           + +V +  +     +A  L   M
Sbjct: 437 YIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNM 496

Query: 120 GEKEDVVLWNSIISA 134
             + D V+W +++ A
Sbjct: 497 PVEPDAVIWGALMGA 511


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 219/659 (33%), Positives = 370/659 (56%), Gaps = 35/659 (5%)

Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
           ++ A  +   ++  + + WN+M  G   N     A++ +  +   G  P+       + +
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC-------------------- 310
             +   L+ G+++H + +K G+  D+ +  +L+ MYA+                      
Sbjct: 75  CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134

Query: 311 -----------CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
                       +N   ++F +++ +D +SW  +I+GY +     +ALEL++ +    + 
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            D   + +V+ AC+    +   +++H +I   G  S++ I+N ++D+Y KCG ++ +  +
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  KDV+SW ++I  + H  L  EAL LF  M  +    + +T++S L A + L  +
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314

Query: 479 KKGKELNGFIIR--KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
             G+ ++ +I +  KG     S+ +SL+DMYA+CG ++ A +VF+ + T+ L  W +MI 
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIF 374

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
              +HG+   A DLF KM      PD ITF+ LL ACSHSG+++ G+     M  DY++ 
Sbjct: 375 GFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKIT 434

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHY C++DLLG     +EA + +R+M +EP   +WC+LL AC++H+N ELGE  A+ 
Sbjct: 435 PKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQN 494

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L++++P NPG+YVL+SN++A + +W  V ++R  +   G+KK PG S IEI + +H FI 
Sbjct: 495 LIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFII 554

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
            DK H  + EIY+ L E+   +E   G+V  T  VL  +EEE K   L  HSE+LAIA+G
Sbjct: 555 GDKFHPRNREIYRMLEEMEMLMEET-GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 613

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++ +  G+ + I KNLRVC +CH   KL+S+++ RE++ RD  R H  + GV SC DYW
Sbjct: 614 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 259/498 (52%), Gaps = 51/498 (10%)

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ ++++WN++   ++ +   + AL L+  M  +GL+ N+Y+F   L++C  S     G 
Sbjct: 26  QEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQ 85

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY--------------------- 219
           +IH   +K G +L +YV  +LI+MYA+ G++ +A  V                       
Sbjct: 86  QIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRG 145

Query: 220 ----------QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
                     ++  KD VSWN+M++G+V+   + +A++ ++++     KPD+   V  VS
Sbjct: 146 YINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVS 205

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A  + G++  G++LH++    GF S+++I N L+D+Y+KC  V     +F  +  +D IS
Sbjct: 206 ACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVIS 265

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W T+I G+   N + +AL LF+ +   G   + + + SVL AC+ L  +   + IH YI 
Sbjct: 266 WNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIN 325

Query: 390 R--KGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           +  KG+++   +L +++D+Y KCG+I+ ++ VF+S+ ++ + SW +MI  +  +G AN A
Sbjct: 326 KRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAA 385

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL--- 503
            +LF  M +  ++ D IT V  LSA S   +L  G+      I +  + +  +   L   
Sbjct: 386 FDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRH-----IFRSMSQDYKITPKLEHY 440

Query: 504 ---VDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEA 556
              +D+   CG    A ++   +  + D ++W S++ A  +H     G+       K+E 
Sbjct: 441 GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEP 500

Query: 557 ESFAPDHITFLALLYACS 574
           E+  P     L+ +YA +
Sbjct: 501 EN--PGSYVLLSNIYATA 516



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 238/493 (48%), Gaps = 49/493 (9%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F+ + +  +  WN M   +  N + +  L+ Y  M  LG+  ++++FP ++K+CA 
Sbjct: 18  AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA---------KCYD------------- 108
            K L  G +IHG VLK GYD   ++  SL++MYA         K +D             
Sbjct: 78  SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137

Query: 109 ---------FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN 159
                       AR+LFD +  K DVV WN++IS Y  +    EAL L+++M +  +  +
Sbjct: 138 ITGYASRGYINNARKLFDEISVK-DVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPD 196

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
             T V  + AC  S    LG ++H+     G    + + N LI +Y++CG++  A G+  
Sbjct: 197 ESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQ 256

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
            L  KD +SWN+++ G    +LY +A+  F+E+  +G+ P+ V  ++ + A   LG +  
Sbjct: 257 GLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDI 316

Query: 280 GKELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGY 337
           G+ +H Y  K  +G  +   +  +L+DMYAKC  +    +VF  M  +   SW  +I G+
Sbjct: 317 GRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGF 376

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV 397
           A +     A +LF  ++  G+D D +    +L ACS     S   ++  +I R    D  
Sbjct: 377 AMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACS----HSGMLDLGRHIFRSMSQDYK 432

Query: 398 ILNAI------VDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS-YVHNGLANEALEL 449
           I   +      +D+ G CG    ++ +  ++    D V W S++ +  +HN   N  L  
Sbjct: 433 ITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHN---NVELGE 489

Query: 450 FYLMNEANVESDS 462
            Y  N   +E ++
Sbjct: 490 SYAQNLIKIEPEN 502



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 170/378 (44%), Gaps = 6/378 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G + +A +LFD++S + V +WNAM+  YV        LE Y  M    +  D  T 
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA    ++ G ++H  +   G+ S   IVN L+ +Y+KC +   A  LF  +  
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLA- 259

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K+DV+ WN++I  ++      EAL LF+EM R G   N  T ++ L AC       +G  
Sbjct: 260 KKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRW 319

Query: 182 IHAATVK--SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           IH    K   G      +  +LI MYA+CG +  A  V   +  +   SWN+M+ GF  +
Sbjct: 320 IHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMH 379

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL-HAYAIKQGFVSDLQI 298
                A   F +++  G  PD +  V  +SA    G L  G+ +  + +        L+ 
Sbjct: 380 GKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEH 439

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQLE 356
              ++D+   C        +   M  + D + W +++ A    NN  L        +++E
Sbjct: 440 YGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIE 499

Query: 357 GLDADVMIIGSVLMACSG 374
             +    ++ S + A +G
Sbjct: 500 PENPGSYVLLSNIYATAG 517



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG V  A  LF  ++++ V +WN ++G +         L  +  M   G S +  T
Sbjct: 241 LYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVT 300

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              V+ ACA L  +D G  IH  + K   G  +   ++ SL+ MYAKC D   A+Q+FD 
Sbjct: 301 MLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDS 360

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M  +  +  WN++I  ++  G+   A  LF +M++ G+  +  TFV  L AC  S    L
Sbjct: 361 MLTRS-LSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDL 419

Query: 179 GMEIH---AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           G  I    +   K    L+ Y    +I +   CG   EA  ++  +    D V W S+L
Sbjct: 420 GRHIFRSMSQDYKITPKLEHY--GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLL 476



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 13/141 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A+Q+FD +  R++ +WNAM+  +  +G+     + +S+MR  GI  D  T
Sbjct: 344 MYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDIT 403

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNS-------LVAMYAKCYDFRKAR 113
           F  ++ AC+    LD G  I   +      S D+ +         ++ +   C  F++A+
Sbjct: 404 FVGLLSACSHSGMLDLGRHIFRSM------SQDYKITPKLEHYGCMIDLLGHCGLFKEAK 457

Query: 114 QLFDRMGEKEDVVLWNSIISA 134
           ++   M  + D V+W S++ A
Sbjct: 458 EMIRTMPMEPDGVIWCSLLKA 478


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/669 (33%), Positives = 389/669 (58%), Gaps = 10/669 (1%)

Query: 80  IHGLVLKCGY------DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
           +H L+L  G+       S+ F  + LV +Y      + A   F  +  K  ++ WN+I+ 
Sbjct: 49  LHALLLVLGFFQPTCPHSSSF-ASQLVNVYVNFGSLQHAFLTFRALPHKP-IIAWNAILR 106

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
              A G   +A+  +  M + G+  + YT+   L+AC       LG  +H  T+      
Sbjct: 107 GLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKA 165

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            VYV  A+I M+A+CG + +A  +  ++ ++D  SW +++ G + N    +A+  FR+++
Sbjct: 166 NVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMR 225

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
             G  PD V   + + A GRL  +  G  L   A++ GF SDL + N ++DMY KC    
Sbjct: 226 SEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPL 285

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
              RVF  M   D +SW+T+IAGY+QN  + ++ +L+  +   GL  + ++  SVL A  
Sbjct: 286 EAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALG 345

Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
            L+ + Q KE+H +++++GL SD+V+ +A++ +Y  CG+I  + ++FE    KD++ W S
Sbjct: 346 KLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNS 405

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MI  Y   G    A   F  +  A    + IT+VS L   + +  L++GKE++G++ + G
Sbjct: 406 MIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSG 465

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
             L  SV +SL+DMY++CG L++  KVF  +  +++  + +MI+A G HG+G+  +  + 
Sbjct: 466 LGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYE 525

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
           +M+ E   P+ +TF++LL ACSH+GL++ G      M  DY ++P  EHY+C+VDL+GRA
Sbjct: 526 QMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRA 585

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
             L+ AY+F+  M + P A V+ +LLGACR+H+  EL E++A+++L+L   + G+YVL+S
Sbjct: 586 GDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLS 645

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           N++A+ ++W+D+ +VR  ++  GL+K PGSSWI++G+ I+ F A    H    +I + L 
Sbjct: 646 NLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKIEETLN 705

Query: 733 EITEKLERE 741
            +   ++ E
Sbjct: 706 SLLLVMKSE 714



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 161/546 (29%), Positives = 282/546 (51%), Gaps = 5/546 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y   GS+  A   F  +  + +  WNA+L   V+ G   + +  Y  M   G++ D +T
Sbjct: 76  VYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYT 135

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +P V+KAC+ L  L  G  +H   +     +  ++  +++ M+AKC     AR++F+ M 
Sbjct: 136 YPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMP 194

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           ++ D+  W ++I     +G+CLEAL LFR+M+  GL+ ++    + L AC       LGM
Sbjct: 195 DR-DLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGM 253

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +    V+SG    +YV+NA+I MY +CG   EA  V   +   D VSW++++ G+ QN 
Sbjct: 254 ALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNC 313

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
           LY ++ + +  +   G   + +   + + A G+L  L  GKE+H + +K+G +SD+ +G+
Sbjct: 314 LYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGS 373

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+ MYA C  +     +F   + +D + W ++I GY        A   FR +       
Sbjct: 374 ALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRP 433

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
           + + + S+L  C+ +  + Q KEIHGY+ + GL  ++ + N+++D+Y KCG ++    VF
Sbjct: 434 NFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVF 493

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           + +  ++V ++ +MIS+   +G   + L  +  M E     + +T +S LSA S   +L 
Sbjct: 494 KQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLD 553

Query: 480 KGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANK-VFNCVQTKDLILWTSMINA 537
           +G  L N  I   G        S +VD+  R G LD A K +     T D  ++ S++ A
Sbjct: 554 RGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGA 613

Query: 538 NGLHGR 543
             LH +
Sbjct: 614 CRLHNK 619


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/580 (37%), Positives = 346/580 (59%), Gaps = 25/580 (4%)

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G+ +HA+ IK  ++  + +   L+ +Y KC  +     VF +M  ++ +SWT +I+ Y+Q
Sbjct: 262 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQ 321

Query: 340 NNCHLKALELFRT---VQLEGL------------------DADVMIIGSVLMACSGLKCM 378
                +AL LF     + L G+                  + +     +VL +C+     
Sbjct: 322 RGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGF 381

Query: 379 SQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
              ++IH  II+    D V + ++++D+Y K G I  +R VFE +  +DVVS T++IS Y
Sbjct: 382 ILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGY 441

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
              GL  EALELF  +    ++S+ +T    L+A S L+ L  GK+++  ++R       
Sbjct: 442 AQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFV 501

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            + +SL+DMY++CG L  + ++F+ +  + +I W +M+     HG G+  + LF  M  E
Sbjct: 502 VLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREE 561

Query: 558 S-FAPDHITFLALLYACSHSGLINEGKKFLEIMRC-DYQLDPWPEHYACLVDLLGRANHL 615
           +   PD +T LA+L  CSH GL ++G      M     +++P  EHY C+VDLLGR+  +
Sbjct: 562 TKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRV 621

Query: 616 EEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVF 675
           EEA++F++ M  EPTA +W +LLGACRVHSN ++GE   ++LLE++PGN GNYV++SN++
Sbjct: 622 EEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLY 681

Query: 676 AASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEIT 735
           A++ +W+DV  +R  M    + K PG S IE+   +H+F A D+SH   +EI  K+ E++
Sbjct: 682 ASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELS 741

Query: 736 EKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVC 795
               +E GYV     VLH+V+EE+K ++L GHSE+LA+++G++ S     IR+ KNLR+C
Sbjct: 742 TSF-KEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRIC 800

Query: 796 VDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           VDCH+F K +S+++GRE+ +RD NRFH    G CSC DYW
Sbjct: 801 VDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 205/430 (47%), Gaps = 52/430 (12%)

Query: 21  RTVFTWNA-MLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAK 79
           R VF  N+  L  + ++   + + +   +M + G ++    +  ++  C   +    G +
Sbjct: 208 RHVFPSNSRTLSTFTTH---IHLQQPLLQMALHGFNMKFENYNAILNECVNKRAFREGQR 264

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +H  ++K  Y  + F+   L+ +Y KC     A  +FD M E+ +VV W ++ISAYS  G
Sbjct: 265 VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPER-NVVSWTAMISAYSQRG 323

Query: 140 QCLEALGLFREMQRVGLV---------------------TNAYTFVAALQACEDSSFETL 178
              +AL LF    ++ L                       N +TF   L +C  S    L
Sbjct: 324 YASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFIL 383

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G +IH+  +K      V+V ++L+ MYA+ GK+ EA  V   L  +D VS  ++++G+ Q
Sbjct: 384 GRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQ 443

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
             L  +A++ FR LQG G K + V     ++A   L  L  GK++H + ++    S + +
Sbjct: 444 LGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVL 503

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG- 357
            N+L+DMY+KC  + Y  R+F  M  +  ISW  ++ GY+++    + L+LF  ++ E  
Sbjct: 504 QNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETK 563

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA--------------IV 403
           +  D + I +VL  CS           HG +  KGL+    +++              +V
Sbjct: 564 VKPDSVTILAVLSGCS-----------HGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVV 612

Query: 404 DVYGKCGNID 413
           D+ G+ G ++
Sbjct: 613 DLLGRSGRVE 622



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 170/352 (48%), Gaps = 34/352 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY---SRMRVLGI--- 54
           +Y KC S+ DA  +FD++ +R V +W AM+ AY   G   + L  +    ++ + G+   
Sbjct: 287 LYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAI 346

Query: 55  ---------------SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSL 99
                            + FTF  V+ +C        G +IH L++K  Y+   F+ +SL
Sbjct: 347 DKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSL 406

Query: 100 VAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN 159
           + MYAK     +AR +F+ + E+ DVV   +IIS Y+  G   EAL LFR +Q  G+ +N
Sbjct: 407 LDMYAKDGKIHEARTVFECLPER-DVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSN 465

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
             T+   L A    +   LG ++H   ++S     V + N+LI MY++CG +T +  +  
Sbjct: 466 YVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFD 525

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLL 278
            +  +  +SWN+ML G+ ++    + ++ F  ++   + KPD V  +  +S     G  L
Sbjct: 526 TMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGG--L 583

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMD--MYAKCCCVNYMGRVFYQMTAQDFI 328
             K L+ +       +D+  G   ++  M    C V+ +GR      A +FI
Sbjct: 584 EDKGLNIF-------NDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFI 628



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 120/239 (50%), Gaps = 9/239 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + +A  +F+ + +R V +  A++  Y   G     LE + R++  G+  +  T
Sbjct: 409 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 468

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+ A + L  LD G ++H  VL+    S   + NSL+ MY+KC +   +R++FD M 
Sbjct: 469 YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 528

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLG 179
           E+  V+ WN+++  YS  G+  E L LF  M +   +  ++ T +A L  C     E  G
Sbjct: 529 ER-TVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKG 587

Query: 180 MEI----HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
           + I     +  ++    ++ Y    ++ +  R G++ EA   + ++  + + + W S+L
Sbjct: 588 LNIFNDMSSGKIEVEPKMEHY--GCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLL 644



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 79/159 (49%), Gaps = 14/159 (8%)

Query: 397 VILNAIVDVYGKCGN---IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
           +IL   + ++  C N   +  +R+VF S  S+ + ++T+ I  ++   L   AL  F + 
Sbjct: 186 LILTLPIIIHQGCFNSKSMFLTRHVFPS-NSRTLSTFTTHI--HLQQPLLQMALHGFNMK 242

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
            E           + L+   +    ++G+ ++  +I+  +     + + L+ +Y +C +L
Sbjct: 243 FE--------NYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSL 294

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
             A+ VF+ +  ++++ WT+MI+A    G    A++LF+
Sbjct: 295 GDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFF 333


>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
 gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
          Length = 772

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/720 (33%), Positives = 395/720 (54%), Gaps = 19/720 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G    A   F    +   F WN+++  +    + +  L  + RM         FT 
Sbjct: 54  YSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASDFVAALNAHRRMLASSARPSPFTV 113

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD----FIVNSLVAMYAKCYDFRKARQLFD 117
           P    A A L  L  GA +H   ++ G  + D     + +SLV MYA+C   R A +LF+
Sbjct: 114 PLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFE 173

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG----LVTNAYTFVAALQACEDS 173
            M E+ DVV W +++S    +G+C + L    EM R+        N+ T  + L+AC   
Sbjct: 174 EMRER-DVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVL 232

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                G  +H   VK G      V +AL +MY++C    +A  +  +L  KD VSW S++
Sbjct: 233 DELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLI 292

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
             +    L  +AM+ F+E+  +G +PD V     +S  G  GN+  GK  HA  +K+ F 
Sbjct: 293 GIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFG 352

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            ++ +GN L+ MY K   V+  GRVF  +  +D  SW  +I GY +  C +K LEL+R +
Sbjct: 353 DNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREM 412

Query: 354 QLEGL-----DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYG 407
           Q         DA+ ++  S + +CS L  +   +  H Y I+  L  D  + N ++ +YG
Sbjct: 413 QFRDTYEFLCDANSLV--SAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYG 470

Query: 408 KCGNIDYSRNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
           +CG  D++  +F   + K DVV+W ++ISSY H G +N A+ L+  M    +  +S TL+
Sbjct: 471 RCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLI 530

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           + +SA ++L  L++G++++ ++   G++ + S+ ++L+DMYA+CG L  A ++F+ +   
Sbjct: 531 TVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQH 590

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           D++ W  MI+  G+HG  K A++LF KME  S  P+ +TFLA+L AC HSGL+ EG++  
Sbjct: 591 DVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLF 650

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
             M   Y L+P  +HYAC+VDLLG++ HL+EA   V +M +EP   +W  LL AC++H +
Sbjct: 651 TRMG-KYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLSACKLHDD 709

Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            E+G  +AKK    D  N G Y+LISN + +++KW ++E++R  M+  G++K  G S ++
Sbjct: 710 FEMGLRIAKKAFASDAENEGYYILISNSYGSAKKWDEIEKLREAMKNHGVQKGAGWSAVD 769



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 174/574 (30%), Positives = 293/574 (51%), Gaps = 19/574 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE---PLRVLETYSRMRVLGIS-V 56
           MY +CG V DA +LF+++ +R V  W A++   V NGE    LR L    R+   G +  
Sbjct: 158 MYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARP 217

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           ++ T    ++AC +L +L+ G  +HG  +K G   +  ++++L +MY+KC+    A  LF
Sbjct: 218 NSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLF 277

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
             + EK DVV W S+I  Y   G   EA+ LF+EM   GL  +       L    +S   
Sbjct: 278 PELPEK-DVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNV 336

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G   HA  +K      V V NALI+MY +   +  A  V   L  +D+ SWN M+ G+
Sbjct: 337 HGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGY 396

Query: 237 VQNDLYCKAMQFFRELQGAGQKP---DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            +     K ++ +RE+Q         D    V+A+S+  RL  L  G+  H Y+IK    
Sbjct: 397 CKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLD 456

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVF-YQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            D  + N L+ MY +C   ++  ++F       D ++W T+I+ YA       A+ L+  
Sbjct: 457 EDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQ 516

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGN 411
           +  EGL  +   + +V+ AC+ L  + + ++IH Y+   G   D+ I  A++D+Y KCG 
Sbjct: 517 MLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQ 576

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           +  +R +F+S+   DVV+W  MIS Y  +G A +ALELF  M   +++ + +T ++ LSA
Sbjct: 577 LGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSA 636

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQTKDL 528
                +L++G++L  F     ++LE ++   + +VD+  + G L  A + V       D 
Sbjct: 637 CCHSGLLEEGRQL--FTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDG 694

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
            +W ++++A  LH       ++  ++  ++FA D
Sbjct: 695 GIWGTLLSACKLHDD----FEMGLRIAKKAFASD 724


>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
           [Oryza sativa Japonica Group]
 gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
          Length = 836

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/797 (30%), Positives = 399/797 (50%), Gaps = 69/797 (8%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK--EDVVLWNSIISA 134
             ++H L ++ G      +  +LV + A+        +L     E   +D VLWN  ++ 
Sbjct: 71  APQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAM 130

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
            + + +  EA+ +FREMQ  G+  + YT    L AC  +     G  +HA  +K   +  
Sbjct: 131 LAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAH 190

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQL--------------------------------- 221
             V   L  MYA    +  A  VL  +                                 
Sbjct: 191 PLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSR 250

Query: 222 --ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
                +  +WN++L+G  ++    +A+     +   G +PD     + + +    G L +
Sbjct: 251 SGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRH 310

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G E+H + ++     D+  G  L+DMYAKC  ++   +V   +  ++  +W +++AGYA 
Sbjct: 311 GMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYAN 370

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL 399
                 ALEL   ++   LD D+     +               I GY +    S  V+L
Sbjct: 371 AGRFDIALELVELMKKNRLDPDITTWNGL---------------ITGYSMNGQSSQAVLL 415

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
                           R +  +  + +VVSWTS+IS   HNG   ++    + M +  V+
Sbjct: 416 ---------------LRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQ 460

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
              +T+   L A + L++ KKGKEL+ F +R+ ++ +  V+++L+DMY++ G+L  A  +
Sbjct: 461 PSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVI 520

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  +Q K+L+L  +M+    +HG+G+ AI+LF+ M      PD ITF ALL AC   GL+
Sbjct: 521 FESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLV 580

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
            EG ++ + M   Y + P  E+YAC+VDLL R  +L+EA  F+    I+P A  W ALL 
Sbjct: 581 TEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLT 640

Query: 640 ACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
            C +H N  L E+ A+ L  L+P N  NY+L+ N++   R + + E ++  M+  G+   
Sbjct: 641 GCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSR 700

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG SWI+I   IH F    K H E+ EIY++L  +  ++ ++ GYV  T  + +NV+EEE
Sbjct: 701 PGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQI-KKAGYVPDTSCIAYNVQEEE 759

Query: 760 KVQMLYGHSERLAIAYGVLKSTEG-SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
           K ++L GH+E+LAI YG+++S    + +R+ KN R+C DCH   K +S L  R++++RDA
Sbjct: 760 KEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDA 819

Query: 819 NRFHHFEAGVCSCGDYW 835
            RFHHF  G CSC DYW
Sbjct: 820 VRFHHFVDGKCSCNDYW 836



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 237/527 (44%), Gaps = 67/527 (12%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           WN  +       E    +  +  M+  G+  D +T   V+ AC     L  G  +H   L
Sbjct: 124 WNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYAL 183

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD---------------------------- 117
           K   D+   +   L  MYA+  D   A ++ D                            
Sbjct: 184 KLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALE 243

Query: 118 ------RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
                 R G + +V  WN+++S  S  G+  EALG+   M + GL  +A T  + L++  
Sbjct: 244 LAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVA 303

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           ++     GMEIH   +++     VY   AL+ MYA+CG++  A  VL  LE+++  +WNS
Sbjct: 304 NTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNS 363

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++ G+     +  A++    ++     PD + T N +      G  +NG+   A      
Sbjct: 364 LVAGYANAGRFDIALELVELMKKNRLDPD-ITTWNGLIT----GYSMNGQSSQA------ 412

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
                               V  + ++       + +SWT++I+G   N  +  +     
Sbjct: 413 --------------------VLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCH 452

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCG 410
            +Q +G+   ++ +  +L AC+GL    + KE+H + +R+    D+V+  A++D+Y K G
Sbjct: 453 EMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGG 512

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
           ++  ++ +FESI+ K++V   +M++    +G   EA+ELF+ M  + ++ DSIT  + L+
Sbjct: 513 SLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLT 572

Query: 471 AASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           A  S+ ++ +G E  +    + G        + +VD+ ARCG LD A
Sbjct: 573 ACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEA 619



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 191/447 (42%), Gaps = 70/447 (15%)

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN---KDSVSWNSMLT 234
           L  ++H+  V++G +    V  AL+ + AR G+    A +L++      KD+V WN  + 
Sbjct: 70  LAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVA 129

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
              + + + +A+  FRE+Q  G   D       + A GR G L  G+ +HAYA+K    +
Sbjct: 130 MLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDA 189

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
              +   L  MYA+   V    RV   M A   + W  ++A  A+      ALEL   + 
Sbjct: 190 HPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMS 249

Query: 355 LEGLDADVMIIGSVLMACS------------------GLKCMSQT--------------- 381
             G + +V    +VL  CS                  GL+  + T               
Sbjct: 250 RSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLR 309

Query: 382 --KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
              EIH + +R  L  D+    A+VD+Y KCG +D ++ V +++E +++ +W S+++ Y 
Sbjct: 310 HGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYA 369

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
           + G  + ALEL  LM +  ++ D  T                    NG I     N + S
Sbjct: 370 NAGRFDIALELVELMKKNRLDPDITT-------------------WNGLITGYSMNGQSS 410

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
            A  L+      G             T +++ WTS+I+ +  +G  + +    ++M+ + 
Sbjct: 411 QAVLLLRQIKAAGV------------TPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDG 458

Query: 559 FAPDHITFLALLYACSHSGLINEGKKF 585
             P  +T   LL AC+   L  +GK+ 
Sbjct: 459 VQPSLVTMSVLLRACAGLALQKKGKEL 485



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/486 (22%), Positives = 199/486 (40%), Gaps = 79/486 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAM---------------LGAYVSNGEPLRVLET 45
           MY +   V  A ++ D +   +V  WNA+               L A +S   P   + T
Sbjct: 200 MYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVAT 259

Query: 46  Y--------------------SRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           +                    + M   G+  DA T   ++K+ A    L  G +IH   L
Sbjct: 260 WNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFL 319

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
           +   +   +   +LV MYAKC     A+++ D + E  ++  WNS+++ Y+ +G+   AL
Sbjct: 320 RNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDAL-EHRNLTTWNSLVAGYANAGRFDIAL 378

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
            L   M++  L  +  T+                                   N LI  Y
Sbjct: 379 ELVELMKKNRLDPDITTW-----------------------------------NGLITGY 403

Query: 206 ARCGKMTEAAGVLYQLE----NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           +  G+ ++A  +L Q++      + VSW S+++G   N  Y  +  F  E+Q  G +P  
Sbjct: 404 SMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSL 463

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
           V     + A   L     GKELH +A+++ +  D+ +   L+DMY+K   +     +F  
Sbjct: 464 VTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFES 523

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
           +  ++ +    ++ G A +    +A+ELF  +   GL  D +   ++L AC  +  +++ 
Sbjct: 524 IQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEG 583

Query: 382 KEIHGYIIRKGLSDLVILN--AIVDVYGKCGNIDYSRNVFE-SIESKDVVSWTSMISS-Y 437
            E    +  K        N   +VD+  +CG +D + +  E S        W ++++   
Sbjct: 584 WEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCS 643

Query: 438 VHNGLA 443
           +H  LA
Sbjct: 644 IHGNLA 649


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/716 (31%), Positives = 384/716 (53%), Gaps = 14/716 (1%)

Query: 127 LWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
           L N  + + S  G+  EA    +EM    +    +++    +AC        G  IH   
Sbjct: 54  LENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRL 113

Query: 187 VKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAM 246
            ++ +N    + N L+ MY  CG   +   V  ++  K+ VSW  +++ + +N    KA+
Sbjct: 114 RRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAI 173

Query: 247 QFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
           + F ++Q +G +P+    ++ + +      L  GK++H++ I+    +++ +   + +MY
Sbjct: 174 RLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMY 233

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
            +C  +     VF  M AQ+ ++WT ++ GY Q      ALELF  + +EG++ D  +  
Sbjct: 234 VRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFS 293

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
            VL  C GL+     ++IH +I++ G  S++ +   +VD Y KCG+I+ +   F  I   
Sbjct: 294 IVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEP 353

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           + VSW+++IS +  +G   + +++F  +    V  +S    S   A ++ + L  G + +
Sbjct: 354 NDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAH 413

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
           G  I++G        S++V MY++CG LD A + F  +   D + WT++I+    HG   
Sbjct: 414 GDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAA 473

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A+  F +M++    P+ +TF+A+L ACSHSGL+ E K++L  M  DY + P  +HY C+
Sbjct: 474 EALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCM 533

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           +D   RA  L+EA + +  M  EP A  W +LLG C  H + +LG+I A+ L  LDPG+ 
Sbjct: 534 IDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDT 593

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESD 725
             Y+L+ N+++A  KW++   VR  M    LKK    SWI +  ++H F+  D+ H +++
Sbjct: 594 AGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTE 653

Query: 726 EIYKKLAEITEKLEREGGYVAQTQFVLHNVEEE------EKVQMLYGHSERLAIAYGVLK 779
            IY KL E           V  +   L N E++       + + L  HSE+LAIA+G++ 
Sbjct: 654 AIYSKLEEFKCS-------VIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGLIS 706

Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + + + I + KNLR C DCH F K VS + GR++VVRD+ RFHHF++G CSC DYW
Sbjct: 707 TEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 271/509 (53%), Gaps = 7/509 (1%)

Query: 54  ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           +SV   ++ C+ +AC  L+ L  G  IH  + +   + +  I N L+ MY  C      +
Sbjct: 83  VSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQ 142

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           ++FD M  K ++V W  +ISAY+ +G+  +A+ LF +MQ  G+  N+  +++ LQ+C   
Sbjct: 143 KVFDEMLMK-NLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGP 201

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
           SF  LG +IH+  +++  N  + V  A+  MY RCG +  A  V   ++ +++V+W  ++
Sbjct: 202 SFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLM 261

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            G+ Q      A++ F  +   G + D+      +     L +   G+++H++ +K G  
Sbjct: 262 VGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAE 321

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           S++ +G  L+D Y KC  +    R F +++  + +SW+ +I+G++Q+      +++F ++
Sbjct: 322 SEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSL 381

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
           + EG+  +  I  SV  AC+    ++   + HG  I++GL S L   +A+V +Y KCG +
Sbjct: 382 RSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRL 441

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           DY+R  FESI+  D V+WT++IS Y ++G A EAL  F  M    V  +++T ++ L+A 
Sbjct: 442 DYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTAC 501

Query: 473 SSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLIL 530
           S   ++ + K+  G + R  G          ++D Y+R G L  A ++ N +    D + 
Sbjct: 502 SHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMS 561

Query: 531 WTSMINANGLH---GRGKVAIDLFYKMEA 556
           W S++     H     GK+A +  ++++ 
Sbjct: 562 WKSLLGGCWAHCDLKLGKIAAENLFRLDP 590



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 228/482 (47%), Gaps = 33/482 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY  CGS +D +++FD++  + + +W  ++ AY  NGE  + +  +S M+  GI  ++  
Sbjct: 131 MYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAV 190

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++++C     L+ G +IH  V++   ++   +  ++  MY +C     A+ +FD M 
Sbjct: 191 YMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGM- 249

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           + ++ V W  ++  Y+ + +   AL LF  M   G+  + + F   L+ C       +G 
Sbjct: 250 DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGR 309

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH+  VK G   +V V   L+  Y +CG +  A     ++   + VSW+++++GF Q+ 
Sbjct: 310 QIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSG 369

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                ++ F  L+  G   +     +   A     NL  G + H  AIK+G VS L   +
Sbjct: 370 RLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGES 429

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            ++ MY+KC  ++Y  R F  +   D ++WT II+GYA +    +AL  FR +Q  G+  
Sbjct: 430 AMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRP 489

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE 420
           + +   +VL ACS    +++ K+  G + R               YG    ID+      
Sbjct: 490 NAVTFIAVLTACSHSGLVAEAKQYLGSMSRD--------------YGVKPTIDH------ 529

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
                    +  MI +Y   GL  EALE   L+N    E D+++  S L    +   LK 
Sbjct: 530 ---------YDCMIDTYSRAGLLQEALE---LINRMPFEPDAMSWKSLLGGCWAHCDLKL 577

Query: 481 GK 482
           GK
Sbjct: 578 GK 579


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/558 (39%), Positives = 338/558 (60%), Gaps = 28/558 (5%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K+ H+  I+ G  +D    N  M    K C ++  G + +Q+                  
Sbjct: 37  KQYHSQIIRLGLSAD----NDAMGRVIKFCAISKSGYLRWQLA----------------R 76

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
           NC    + ++  +  + +  +      ++ AC     + + K+IH ++++ G  +D   L
Sbjct: 77  NC----IFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSL 132

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKD--VVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           N ++ +Y    +++ +R VF+++  +D   VSW +MI++YV +   +EA  LF  M   N
Sbjct: 133 NNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLEN 192

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
           V  D     S LSA + L  L++GK ++G+I + G  L+  +A++++DMY +CG L+ A+
Sbjct: 193 VVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKAS 252

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
           +VFN +  K +  W  MI    +HG+G+ AI+LF +ME E  APD ITF+ +L AC+HSG
Sbjct: 253 EVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSG 312

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L+ EGK + + M     L P  EH+ C+VDLLGRA  LEEA + +  M + P A V  AL
Sbjct: 313 LVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGAL 372

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           +GACR+H N ELGE + KK++EL+P N G YVL++N++A++ +W+DV +VR  M   G+K
Sbjct: 373 VGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVK 432

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K PG S IE  + +  FIA  ++H ++ EIY KL EI E + R  GYV  T  VLH+++E
Sbjct: 433 KAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETI-RSIGYVPDTDGVLHDIDE 491

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           EEK   LY HSE+LAIA+G+LK+  G  +RI+KNLR+C DCH   KL+S+++ RE+++RD
Sbjct: 492 EEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRD 551

Query: 818 ANRFHHFEAGVCSCGDYW 835
            NRFHHF  G CSC DYW
Sbjct: 552 RNRFHHFRMGGCSCKDYW 569



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 145/289 (50%), Gaps = 9/289 (3%)

Query: 46  YSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK 105
           YSRM    +S + FT+P +I+AC +   ++ G +IH  VLK G+ +  F +N+L+ MY  
Sbjct: 82  YSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVN 141

Query: 106 CYDFRKARQLFDRMGEKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFV 164
                +AR++FD M +++ + V WN++I+AY  S +  EA  LF  M+   +V + +   
Sbjct: 142 FQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAA 201

Query: 165 AALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
           + L AC        G  IH    KSG  L   +A  +I MY +CG + +A+ V  +L  K
Sbjct: 202 SMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK 261

Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELH 284
              SWN M+ G   +     A++ F+E++     PD +  VN +SA    G +  GK   
Sbjct: 262 GISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYF 321

Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
            Y  +   V  L+ G   M+ +   C V+ +GR      A+  I+   +
Sbjct: 322 QYMTE---VLGLKPG---MEHFG--CMVDLLGRAGLLEEARKLINEMPV 362



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 12/284 (4%)

Query: 147 LFREMQRVGLVTNAYTFVAALQAC-EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
           ++  M    +  N +T+   ++AC  D + E  G +IHA  +K G     +  N LI MY
Sbjct: 81  MYSRMLHKSVSPNKFTYPPLIRACCIDYAIEE-GKQIHAHVLKFGFGADGFSLNNLIHMY 139

Query: 206 ARCGKMTEAAGVLYQLENKD--SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
                + +A  V   +  +D  SVSWN+M+  +VQ++   +A   F  ++      D+  
Sbjct: 140 VNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFV 199

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
             + +SA   LG L  GK +H Y  K G   D ++  T++DMY KC C+     VF ++ 
Sbjct: 200 AASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELP 259

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
            +   SW  +I G A +     A+ELF+ ++ E +  D +   +VL AC+    + + K 
Sbjct: 260 QKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKH 319

Query: 384 IHGYI-----IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESI 422
              Y+     ++ G+        +VD+ G+ G ++ +R +   +
Sbjct: 320 YFQYMTEVLGLKPGMEH---FGCMVDLLGRAGLLEEARKLINEM 360



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 27/241 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQR--TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
           MY    S+  A ++FD + QR     +WNAM+ AYV +         + RMR+  + +D 
Sbjct: 138 MYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDK 197

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           F    ++ AC  L  L+ G  IHG + K G +    +  +++ MY KC    KA ++F+ 
Sbjct: 198 FVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNE 257

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           + +K  +  WN +I   +  G+   A+ LF+EM+R  +  +  TFV  L AC        
Sbjct: 258 LPQK-GISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSAC-------- 308

Query: 179 GMEIHAATVKSGQNLQVYVANAL------------IAMYARCGKMTEAAGVLYQLE-NKD 225
               H+  V+ G++   Y+   L            + +  R G + EA  ++ ++  N D
Sbjct: 309 ---AHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPD 365

Query: 226 S 226
           +
Sbjct: 366 A 366



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 116/274 (42%), Gaps = 29/274 (10%)

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
           M++ K+ H  IIR GLS      A  D  G+          F +I     + W       
Sbjct: 33  MAELKQYHSQIIRLGLS------ADNDAMGRVIK-------FCAISKSGYLRWQ------ 73

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
               LA   + ++  M   +V  +  T    + A      +++GK+++  +++ GF  +G
Sbjct: 74  ----LARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADG 129

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDL--ILWTSMINANGLHGRGKVAIDLFYKME 555
              ++L+ MY    +L+ A +VF+ +  +D   + W +MI A     R   A  LF +M 
Sbjct: 130 FSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMR 189

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANH 614
            E+   D     ++L AC+  G + +GK     I +   +LD   +    ++D+  +   
Sbjct: 190 LENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELD--SKLATTVIDMYCKCGC 247

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
           LE+A +    +  +     W  ++G   +H   E
Sbjct: 248 LEKASEVFNELP-QKGISSWNCMIGGLAMHGKGE 280


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/645 (33%), Positives = 370/645 (57%), Gaps = 38/645 (5%)

Query: 228 SWNSMLTGFVQNDLYCKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
           +W S+++G  +   +   M+ F E+  +     P+       +     LG++ +G+ +H 
Sbjct: 91  AWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHG 150

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
           + ++ G   D+ + N ++DMYAKC       R F  M  +D  SW  +I    Q+   + 
Sbjct: 151 WILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVG 210

Query: 346 ALELFRTVQLEGLDADVMIIG------------------------------SVLMACSGL 375
           A +LF    L  + +   I+                               S++ A +GL
Sbjct: 211 ATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGL 270

Query: 376 -KCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE---SIESKDVVSW 430
                  +++HG ++   L  D  +  +++D+Y KCG ++ + ++F+           +W
Sbjct: 271 LSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAW 330

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
           ++M++ YV NG   EALE F  M    V +    L S  SA ++  ++++G++++GF+ +
Sbjct: 331 STMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEK 390

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
            G   +  +AS++VDMY++ G+L+ A ++F   QTK++ LWT+M+ +   HG+G++A+++
Sbjct: 391 LGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEI 450

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLG 610
           F +M+AE   P+ IT +A+L ACSHSGL+++G  +  +M+ +Y + P  EHY C+VDL G
Sbjct: 451 FSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYG 510

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVL 670
           RA  L++A  F+   +I   A VW  LL ACR+H + E  ++ ++KL++L+  + G+YVL
Sbjct: 511 RAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVL 570

Query: 671 ISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKK 730
           +SN++A + KW D  ++R  M+   ++K PG SWI + N +H F+A D SH  S EIY  
Sbjct: 571 MSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAY 630

Query: 731 LAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITK 790
           L ++ E+L +E GY ++T  V+H++EEE++   L  HSE+LAIA+G++ +  G+ +RI K
Sbjct: 631 LEKLMERL-KEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFK 689

Query: 791 NLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           NLRVC DCH   K ++R   RE+VVRD  RFHHF+ G CSC D+W
Sbjct: 690 NLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 216/470 (45%), Gaps = 48/470 (10%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM--RVLGISVDAFTFPCVIKA 67
           +A ++FD    R++  W +++      G     +  ++ M       + +AF    V++ 
Sbjct: 76  NAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRC 135

Query: 68  CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE---- 123
           CA L D++ G +IHG +L+ G      + N+++ MYAKC D  +AR+ F  M +K+    
Sbjct: 136 CAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSW 195

Query: 124 --------------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
                                     DV  WN+I+S     G   EALG  ++M R G+ 
Sbjct: 196 NIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVT 255

Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
            + YT+          S   LG ++H   V +      +V  +L+ MY +CG+M  A  +
Sbjct: 256 FSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSI 315

Query: 218 LYQLEN---KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRL 274
             +  +       +W++M+ G+VQN    +A++FFR +   G    Q    +  SA    
Sbjct: 316 FDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANA 375

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
           G +  G+++H +  K G   D  + + ++DMY+K   +    R+F     ++   WTT++
Sbjct: 376 GMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTML 435

Query: 335 AGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGY 387
             YA +     ALE+F  ++ E +  + + + +VL ACS       G    +  +E +G 
Sbjct: 436 CSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGI 495

Query: 388 IIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
           +      +    N +VD+YG+ G +D ++N  E  + S + V W +++S+
Sbjct: 496 V-----PNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSA 540



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 177/374 (47%), Gaps = 11/374 (2%)

Query: 6   GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
           G ++ A QLFD+ S R V +WN ++   + +G     L    +M   G++   +T+  V 
Sbjct: 206 GDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVF 265

Query: 66  KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE--KE 123
               +L   D G ++HG V+    +   F+  SL+ MY KC +   A  +FDR  +  ++
Sbjct: 266 ALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTED 325

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
               W+++++ Y  +G+  EAL  FR M R G+    +   +   AC ++     G ++H
Sbjct: 326 RQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVH 385

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
               K G      +A+A++ MY++ G + +A  +    + K+   W +ML  +  +    
Sbjct: 386 GFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGR 445

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ---GFVSDLQIGN 300
            A++ F  ++     P+++  V  +SA    G + +G   H + + Q   G V + +  N
Sbjct: 446 MALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDG--YHYFNLMQEEYGIVPNTEHYN 503

Query: 301 TLMDMYAKCCCVNYMGRVFYQ-MTAQDFISWTTIIAGYAQNNCHLKALELF--RTVQLEG 357
            ++D+Y +   ++       +   + + + W T+++   + + H++  +L   + VQLE 
Sbjct: 504 CMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSA-CRLHKHIEYAQLASEKLVQLEQ 562

Query: 358 LDADVMIIGSVLMA 371
            DA   ++ S + A
Sbjct: 563 YDAGSYVLMSNMYA 576



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 20/247 (8%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRT---VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
           MY KCG +  A  +FD+ S  T    F W+ M+  YV NG     LE + RM   G+   
Sbjct: 302 MYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAG 361

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
            F    V  ACA    ++ G ++HG V K G+     + +++V MY+K      A ++F 
Sbjct: 362 QFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIF- 420

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
           R  + ++V LW +++ +Y++ GQ   AL +F  M+   ++ N  T VA L AC  S   +
Sbjct: 421 RSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVS 480

Query: 178 LG------MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK---DSVS 228
            G      M+     V + ++      N ++ +Y R G + +A   +   ENK   ++V 
Sbjct: 481 DGYHYFNLMQEEYGIVPNTEHY-----NCMVDLYGRAGLLDKAKNFIE--ENKISHEAVV 533

Query: 229 WNSMLTG 235
           W ++L+ 
Sbjct: 534 WKTLLSA 540



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 2/125 (1%)

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE--ANVESDSITLVSALSAA 472
           +  VF+   ++ + +WTS+IS     G   + +  F  M +       ++  L   L   
Sbjct: 77  AHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCC 136

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           + L  ++ G+ ++G+I+R G   +  + ++++DMYA+CG    A + F  +  KD   W 
Sbjct: 137 AGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWN 196

Query: 533 SMINA 537
            +I A
Sbjct: 197 IVIRA 201


>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 842

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/797 (30%), Positives = 399/797 (50%), Gaps = 69/797 (8%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK--EDVVLWNSIISA 134
             ++H L ++ G      +  +LV + A+        +L     E   +D VLWN  ++ 
Sbjct: 71  APQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAM 130

Query: 135 YSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ 194
            + + +  EA+ +FREMQ  G+  + YT    L AC  +     G  +HA  +K   +  
Sbjct: 131 LAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAH 190

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQL--------------------------------- 221
             V   L  MYA    +  A  VL  +                                 
Sbjct: 191 PLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSR 250

Query: 222 --ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
                +  +WN++L+G  ++    +A+     +   G +PD     + + +    G L +
Sbjct: 251 SGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRH 310

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQ 339
           G E+H + ++     D+  G  L+DMYAKC  ++   +V   +  ++  +W +++AGYA 
Sbjct: 311 GMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYAN 370

Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL 399
                 ALEL   ++   LD D+     +               I GY +    S  V+L
Sbjct: 371 AGRFDIALELVELMKKNRLDPDITTWNGL---------------ITGYSMNGQSSQAVLL 415

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
                           R +  +  + +VVSWTS+IS   HNG   ++    + M +  V+
Sbjct: 416 ---------------LRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQ 460

Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
              +T+   L A + L++ KKGKEL+ F +R+ ++ +  V+++L+DMY++ G+L  A  +
Sbjct: 461 PSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVI 520

Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
           F  +Q K+L+L  +M+    +HG+G+ AI+LF+ M      PD ITF ALL AC   GL+
Sbjct: 521 FESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLV 580

Query: 580 NEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
            EG ++ + M   Y + P  E+YAC+VDLL R  +L+EA  F+    I+P A  W ALL 
Sbjct: 581 TEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLT 640

Query: 640 ACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
            C +H N  L E+ A+ L  L+P N  NY+L+ N++   R + + E ++  M+  G+   
Sbjct: 641 GCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSR 700

Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
           PG SWI+I   IH F    K H E+ EIY++L  +  ++ ++ GYV  T  + +NV+EEE
Sbjct: 701 PGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQI-KKAGYVPDTSCIAYNVQEEE 759

Query: 760 KVQMLYGHSERLAIAYGVLKSTEG-SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDA 818
           K ++L GH+E+LAI YG+++S    + +R+ KN R+C DCH   K +S L  R++++RDA
Sbjct: 760 KEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDA 819

Query: 819 NRFHHFEAGVCSCGDYW 835
            RFHHF  G CSC DYW
Sbjct: 820 VRFHHFVDGKCSCNDYW 836



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 237/527 (44%), Gaps = 67/527 (12%)

Query: 26  WNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           WN  +       E    +  +  M+  G+  D +T   V+ AC     L  G  +H   L
Sbjct: 124 WNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYAL 183

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD---------------------------- 117
           K   D+   +   L  MYA+  D   A ++ D                            
Sbjct: 184 KLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALE 243

Query: 118 ------RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
                 R G + +V  WN+++S  S  G+  EALG+   M + GL  +A T  + L++  
Sbjct: 244 LAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVA 303

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
           ++     GMEIH   +++     VY   AL+ MYA+CG++  A  VL  LE+++  +WNS
Sbjct: 304 NTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNS 363

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++ G+     +  A++    ++     PD + T N +      G  +NG+   A      
Sbjct: 364 LVAGYANAGRFDIALELVELMKKNRLDPD-ITTWNGLIT----GYSMNGQSSQA------ 412

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
                               V  + ++       + +SWT++I+G   N  +  +     
Sbjct: 413 --------------------VLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCH 452

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCG 410
            +Q +G+   ++ +  +L AC+GL    + KE+H + +R+    D+V+  A++D+Y K G
Sbjct: 453 EMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGG 512

Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
           ++  ++ +FESI+ K++V   +M++    +G   EA+ELF+ M  + ++ DSIT  + L+
Sbjct: 513 SLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLT 572

Query: 471 AASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           A  S+ ++ +G E  +    + G        + +VD+ ARCG LD A
Sbjct: 573 ACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEA 619



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 191/447 (42%), Gaps = 70/447 (15%)

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN---KDSVSWNSMLT 234
           L  ++H+  V++G +    V  AL+ + AR G+    A +L++      KD+V WN  + 
Sbjct: 70  LAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVA 129

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
              + + + +A+  FRE+Q  G   D       + A GR G L  G+ +HAYA+K    +
Sbjct: 130 MLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDA 189

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
              +   L  MYA+   V    RV   M A   + W  ++A  A+      ALEL   + 
Sbjct: 190 HPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMS 249

Query: 355 LEGLDADVMIIGSVLMACS------------------GLKCMSQT--------------- 381
             G + +V    +VL  CS                  GL+  + T               
Sbjct: 250 RSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLR 309

Query: 382 --KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
              EIH + +R  L  D+    A+VD+Y KCG +D ++ V +++E +++ +W S+++ Y 
Sbjct: 310 HGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYA 369

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
           + G  + ALEL  LM +  ++ D  T                    NG I     N + S
Sbjct: 370 NAGRFDIALELVELMKKNRLDPDITT-------------------WNGLITGYSMNGQSS 410

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
            A  L+      G             T +++ WTS+I+ +  +G  + +    ++M+ + 
Sbjct: 411 QAVLLLRQIKAAGV------------TPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDG 458

Query: 559 FAPDHITFLALLYACSHSGLINEGKKF 585
             P  +T   LL AC+   L  +GK+ 
Sbjct: 459 VQPSLVTMSVLLRACAGLALQKKGKEL 485



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/486 (22%), Positives = 199/486 (40%), Gaps = 79/486 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAM---------------LGAYVSNGEPLRVLET 45
           MY +   V  A ++ D +   +V  WNA+               L A +S   P   + T
Sbjct: 200 MYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVAT 259

Query: 46  Y--------------------SRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           +                    + M   G+  DA T   ++K+ A    L  G +IH   L
Sbjct: 260 WNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFL 319

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
           +   +   +   +LV MYAKC     A+++ D + E  ++  WNS+++ Y+ +G+   AL
Sbjct: 320 RNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDAL-EHRNLTTWNSLVAGYANAGRFDIAL 378

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
            L   M++  L  +  T+                                   N LI  Y
Sbjct: 379 ELVELMKKNRLDPDITTW-----------------------------------NGLITGY 403

Query: 206 ARCGKMTEAAGVLYQLE----NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           +  G+ ++A  +L Q++      + VSW S+++G   N  Y  +  F  E+Q  G +P  
Sbjct: 404 SMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSL 463

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
           V     + A   L     GKELH +A+++ +  D+ +   L+DMY+K   +     +F  
Sbjct: 464 VTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFES 523

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
           +  ++ +    ++ G A +    +A+ELF  +   GL  D +   ++L AC  +  +++ 
Sbjct: 524 IQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEG 583

Query: 382 KEIHGYIIRKGLSDLVILN--AIVDVYGKCGNIDYSRNVFE-SIESKDVVSWTSMISS-Y 437
            E    +  K        N   +VD+  +CG +D + +  E S        W ++++   
Sbjct: 584 WEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCS 643

Query: 438 VHNGLA 443
           +H  LA
Sbjct: 644 IHGNLA 649


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 249/734 (33%), Positives = 408/734 (55%), Gaps = 41/734 (5%)

Query: 55  SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYD----STDFIVNSLVAMYAKCYDFR 110
           ++D F  P   K+ A L+ L     IHG  L+  +D     T  + N+L+  YA+C D  
Sbjct: 54  TLDRFALPPAAKSAAALRSLTAVRSIHGAALR--HDLLDGPTPAVSNALLTAYARCGDLT 111

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
            A  LFD M  + D V +NS+I+A     + L AL   R+M   G    ++T V+ L AC
Sbjct: 112 AALALFDAMPSR-DAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLAC 170

Query: 171 EDSSFE-TLGMEIHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS- 226
              + +  LG E HA  +K+G     + +  NAL++MYAR G + +A  +   +   D  
Sbjct: 171 SHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVP 230

Query: 227 ----VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
               V+WN+M++  VQ+    +A++   ++   G +PD V   +A+ A  +L  L  G+E
Sbjct: 231 GGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGRE 290

Query: 283 LHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA--QDFISWTTIIAGYAQ 339
           +HAY +K     ++  + + L+DMYA    V     VF  + A  +    W  +I GYAQ
Sbjct: 291 MHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQ 350

Query: 340 NNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LV 397
                 ALELF  ++ E G+      I  VL +C+  +  +  + +HGY++++G++D   
Sbjct: 351 AGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPF 410

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM---- 453
           + NA++D+Y + G++D +R +F +IE +DVVSW ++I+  V  G   +A +L   M    
Sbjct: 411 VQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQG 470

Query: 454 --------------NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSV 499
                         +E  V  ++ITL++ L   + L+   +GKE++G+ +R   + + +V
Sbjct: 471 RFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAV 530

Query: 500 ASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESF 559
            S+LVDMYA+CG L ++  VF+ +  +++I W  +I A G+HG G  AI LF +M A   
Sbjct: 531 GSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDE 590

Query: 560 A-PDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
           A P+ +TF+A L ACSHSG+++ G +    M+ ++ ++P P+ +AC VD+LGRA  L+EA
Sbjct: 591 AKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEA 650

Query: 619 YQFVRSMQI-EPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           Y+ + SM+  E     W + LGACR+H N  LGEI A++L EL+P    +YVL+ N+++A
Sbjct: 651 YRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHYVLLCNIYSA 710

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           +  W+   +VR RMR  G+ K PG SWIE+   IH F+A + +H ES  ++  +  + E+
Sbjct: 711 AGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWER 770

Query: 738 LEREGGYVAQTQFV 751
           + R+ GY   T  +
Sbjct: 771 M-RDQGYTPDTTLI 783



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 174/626 (27%), Positives = 307/626 (49%), Gaps = 41/626 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y +CG +  A  LFD +  R   T+N+++ A       L  L+    M + G  + +FT 
Sbjct: 104 YARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTL 163

Query: 62  PCVIKACAML-KDLDCGAKIHGLVLKCGYDSTD--FIVNSLVAMYAKCYDFRKARQLFDR 118
             V+ AC+ L +DL  G + H   LK G+   D  F  N+L++MYA+      A+ LF  
Sbjct: 164 VSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGS 223

Query: 119 MGEKE----DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
           +G  +     VV WN+++S    SG+C EA+ +  +M   G+  +  TF +AL AC    
Sbjct: 224 VGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLE 283

Query: 175 FETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLE--NKDSVSWNS 231
             +LG E+HA  +K        +VA+AL+ MYA   ++  A  V   +    +    WN+
Sbjct: 284 MLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNA 343

Query: 232 MLTGFVQNDLYCKAMQFFRELQG-AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           M+ G+ Q  L   A++ F  ++  AG  P +      + +  R       + +H Y +K+
Sbjct: 344 MICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKR 403

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G   +  + N LMD+YA+   ++    +F  +  +D +SW T+I G         A +L 
Sbjct: 404 GMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLV 463

Query: 351 RTVQLEGLDADV------------------MIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           R +Q +G   D                   + + ++L  C+ L   ++ KEIHGY +R  
Sbjct: 464 REMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHA 523

Query: 393 L-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
           L SD+ + +A+VD+Y KCG +  SR VF+ +  ++V++W  +I +Y  +GL +EA+ LF 
Sbjct: 524 LDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFD 583

Query: 452 LMNEAN-VESDSITLVSALSAASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYAR 509
            M  ++  + + +T ++AL+A S   ++ +G E+   + R  G      + +  VD+  R
Sbjct: 584 RMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGR 643

Query: 510 CGALDIANKVFNCVQT--KDLILWTSMINANGLH---GRGKVAIDLFYKMEAESFAPDHI 564
            G LD A ++ + ++   + +  W+S + A  LH     G++A +  +++E +  +  H 
Sbjct: 644 AGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEAS--HY 701

Query: 565 TFLALLYACSHSGLINEGKKFLEIMR 590
             L  +Y  S +GL  +  +    MR
Sbjct: 702 VLLCNIY--SAAGLWEKSSEVRSRMR 725



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 155/537 (28%), Positives = 245/537 (45%), Gaps = 52/537 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTV-----FTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS 55
           MY + G V DA+ LF  V    V      TWN M+   V +G     +E    M   G+ 
Sbjct: 207 MYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVR 266

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLK-CGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
            D  TF   + AC+ L+ L  G ++H  VLK     +  F+ ++LV MYA       AR 
Sbjct: 267 PDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARL 326

Query: 115 LFDRM--GEKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACE 171
           +FD +  GE++ + LWN++I  Y+ +G   +AL LF  M+   G+V +  T    L +C 
Sbjct: 327 VFDMVPAGERQ-LGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCA 385

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            S        +H   VK G     +V NAL+ +YAR G M  A  +   +E +D VSWN+
Sbjct: 386 RSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNT 445

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQ------------------KPDQVCTVNAVSASGR 273
           ++TG V       A Q  RE+Q  G+                   P+ +  +  +     
Sbjct: 446 LITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAM 505

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           L     GKE+H YA++    SD+ +G+ L+DMYAKC C+     VF ++  ++ I+W  +
Sbjct: 506 LAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVL 565

Query: 334 IAGYAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIH 385
           I  Y  +    +A+ LF R V  +    + +   + L ACS       GL+     K  H
Sbjct: 566 IMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNH 625

Query: 386 GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIES--KDVVSWTSMISS-YVHNGL 442
           G      L         VD+ G+ G +D +  +  S+E   + V +W+S + +  +H  +
Sbjct: 626 GVEPTPDLH-----ACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNV 680

Query: 443 A---NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           A     A  LF L  E +  S  + L +  SAA    + +K  E+   + ++G + E
Sbjct: 681 ALGEIAAERLFEL--EPDEASHYVLLCNIYSAA---GLWEKSSEVRSRMRQRGVSKE 732


>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
 gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
          Length = 917

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/678 (33%), Positives = 389/678 (57%), Gaps = 12/678 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           MYGKCGS+ DA ++F+++      +WNA++ A   +G  +  L  + RM++ G I+ D  
Sbjct: 248 MYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKV 307

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  ++ AC+    L  G  +H  +L+CGYD+   + N ++ MY+ C     A   F  M
Sbjct: 308 TFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTM 367

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            E+ D + WN+IIS ++ +G C EA+ LFR M   G+  + +TF++ +          + 
Sbjct: 368 VER-DAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKIL 426

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            E+    V+SG  L V++ +ALI M++R G + EA  +   ++++D V W S+++ +VQ+
Sbjct: 427 SEL---MVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQH 483

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A+   R ++  G   +    V A++A   L  L  GK +HA+AI++GF +   +G
Sbjct: 484 GSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVG 543

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L++MYAKC C+    RVF+Q   ++ +SW TI A Y Q +   +AL+LF+ +QLEGL 
Sbjct: 544 NALINMYAKCGCLEEADRVFHQ-CGKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLK 602

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
           AD +   +VL  CS     S+ ++IH  ++  G+ SD ++  A++++Y    ++D +  +
Sbjct: 603 ADKVSFVTVLNGCSS---ASEGRKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRI 659

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA--ASSLS 476
           F  +E +D+VSW +MI+    +GL+ EA+++F  M    V  D I+ V+ L+A   SS S
Sbjct: 660 FSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPS 719

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            LK+ + +   I  +G+  +  V +++V M+ R G L  A + F  ++ +D   W  ++ 
Sbjct: 720 SLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVT 779

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           A+  HG  + A+ LF +M+ ES  PD IT +++L ACSH GLI EG      M  ++ + 
Sbjct: 780 AHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYHHFTSMGREFGIA 839

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
              EHY C+VDLL RA  L++A + +R M +  +  +W  LL AC+V  +++  + V ++
Sbjct: 840 GSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRVGER 899

Query: 657 LLELDPGNPGNYVLISNV 674
           ++ELDP  P  YV++S+V
Sbjct: 900 VMELDPRRPAAYVVLSSV 917



 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 216/746 (28%), Positives = 397/746 (53%), Gaps = 36/746 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG V DA  +F  +   +  +WN++L A+  +G+  +  + + RM++ G++ D  T
Sbjct: 46  MYGKCGCVEDAVSVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRIT 105

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+  C+ + DL  G  +HG VL+ G +    +  SL+ MY KC     AR++FD++ 
Sbjct: 106 FVTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLA 165

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             +DVV W S+I  Y    +C+EAL LF  M+  G++ N  T+  A+ AC        G 
Sbjct: 166 -LQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGK 224

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH+  ++ G    V V+ A++ MY +CG + +A  V  ++ + ++VSWN+++    Q+ 
Sbjct: 225 LIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHG 284

Query: 241 LYCKAMQFFRELQ-GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
              +A+ +F+ +Q   G  PD+V  +  ++A      L  G+ LH   ++ G+ + L +G
Sbjct: 285 CCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVG 344

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N +M MY+ C  ++     F  M  +D ISW TII+G+AQ     +A+ LFR +  EG+ 
Sbjct: 345 NCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGIT 404

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
            D     S++    G   M + K +   ++  G+  D+ +++A+++++ + GN+  +R++
Sbjct: 405 PDKFTFISII---DGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSL 461

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ ++ +D+V WTS+ISSYV +G +++AL    LM    +  +  TLV+AL+A +SL+ L
Sbjct: 462 FDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTAL 521

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN-CVQTKDLILWTSMINA 537
            +GK ++   I +GF    +V ++L++MYA+CG L+ A++VF+ C   K+L+ W ++  A
Sbjct: 522 SEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQC--GKNLVSWNTIAAA 579

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI-----MRCD 592
                + + A+ LF +M+ E    D ++F+ +L  CS +   +EG+K   I     M  D
Sbjct: 580 YVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSA---SEGRKIHNILLETGMESD 636

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS-NKELGE 651
           + +         L+++   +  L+EA +    M+       W A++     H  ++E  +
Sbjct: 637 HIVS------TALLNMYTASKSLDEASRIFSRMEFRDIVS-WNAMIAGKAEHGLSREAIQ 689

Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE----I 707
           +  +  LE    +  ++V + N F+ S     ++Q R+      ++K       E    +
Sbjct: 690 MFQRMQLEGVAPDKISFVTVLNAFSGSSP-SSLKQARL------VEKLISDQGYETDTIV 742

Query: 708 GNKIHSFIARDKSHSESDEIYKKLAE 733
           GN I S   R    +E+   ++++ E
Sbjct: 743 GNAIVSMFGRSGRLAEARRAFERIRE 768



 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 199/683 (29%), Positives = 368/683 (53%), Gaps = 17/683 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG V DA ++FDK++ + V +W +M+  YV +   +  LE + RMR  G+  +  T
Sbjct: 147 MYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRIT 206

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +   I ACA ++ +  G  IH  VL+ G++S   +  ++V MY KC     AR++F+RM 
Sbjct: 207 YATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERM- 265

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLG 179
              + V WN+I++A +  G C+EAL  F+ MQ + G+  +  TF+  L AC   +  T G
Sbjct: 266 PHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFG 325

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   ++ G +  + V N ++ MY+ CG++  AA     +  +D++SWN++++G  Q 
Sbjct: 326 ELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQA 385

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  FR +   G  PD+   ++ +  + R+      K L    ++ G   D+ + 
Sbjct: 386 GFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQ---EAKILSELMVESGVELDVFLV 442

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           + L++M+++   V     +F  M  +D + WT+II+ Y Q+     AL   R ++LEGL 
Sbjct: 443 SALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLM 502

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            +   + + L AC+ L  +S+ K IH + I +G  +   + NA++++Y KCG ++ +  V
Sbjct: 503 GNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRV 562

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F     K++VSW ++ ++YV      EAL+LF  M    +++D ++ V+ L+  SS S  
Sbjct: 563 FHQC-GKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSAS-- 619

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            +G++++  ++  G   +  V+++L++MY    +LD A+++F+ ++ +D++ W +MI   
Sbjct: 620 -EGRKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGK 678

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN-EGKKFLEIMRCD--YQL 595
             HG  + AI +F +M+ E  APD I+F+ +L A S S   + +  + +E +  D  Y+ 
Sbjct: 679 AEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYET 738

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
           D    +   +V + GR+  L EA +    ++ E  A  W  ++ A   H   E    + +
Sbjct: 739 DTIVGN--AIVSMFGRSGRLAEARRAFERIR-ERDAASWNVIVTAHAQHGEVEQALKLFR 795

Query: 656 KLLELDPGNPGNYVLISNVFAAS 678
           + ++ +   P +  L+S + A S
Sbjct: 796 R-MQQESSRPDSITLVSVLSACS 817



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/561 (27%), Positives = 287/561 (51%), Gaps = 7/561 (1%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  ++  CA    +  G  +H  V    +   D + N+ + MY KC     A  +F  +
Sbjct: 4   TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
                V  WNS+++A++  GQ  +A  +F+ M+  GL  +  TFV  L  C      + G
Sbjct: 64  DHPSQVS-WNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRG 122

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             +H   +++G    V V  +LI MY +CG + +A  V  +L  +D VSW SM+  +VQ+
Sbjct: 123 KLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQH 182

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           D   +A++ F  ++ +G  P+++    A+SA   + ++ +GK +H+  ++ GF SD+ + 
Sbjct: 183 DRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVS 242

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GL 358
             +++MY KC  +     VF +M   + +SW  I+A   Q+ C ++AL  F+ +QL+ G+
Sbjct: 243 CAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGI 302

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D +   ++L ACS    ++  + +H  I++ G  + L++ N I+ +Y  CG ID +  
Sbjct: 303 TPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAA 362

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
            F ++  +D +SW ++IS +   G  +EA+ LF  M    +  D  T +S +   +    
Sbjct: 363 FFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTAR--- 419

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           +++ K L+  ++  G  L+  + S+L++M++R G +  A  +F+ ++ +D+++WTS+I++
Sbjct: 420 MQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISS 479

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              HG    A+     M  E    +  T +  L AC+    ++EG K +     +     
Sbjct: 480 YVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEG-KLIHAHAIERGFAA 538

Query: 598 WPEHYACLVDLLGRANHLEEA 618
            P     L+++  +   LEEA
Sbjct: 539 SPAVGNALINMYAKCGCLEEA 559


>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/545 (40%), Positives = 332/545 (60%), Gaps = 7/545 (1%)

Query: 283 LHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNC 342
           +H + +K GF  D  I N+L+ +YA    +    ++F   + +D +SW  +I GY +   
Sbjct: 22  VHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRG- 80

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI 402
               +   R V    +  DV+   +++   + +  + + K +   +  +   +LV  N++
Sbjct: 81  ---EMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPER---NLVSWNSM 134

Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
           +  + KCGN++ +  +F  +  +DVVSW SM++ Y   G  NEAL LF  M    V+   
Sbjct: 135 LSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTE 194

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
            T+VS LSA + L  L KG  L+ +I      +   V ++LVDMYA+CG + +A +VFN 
Sbjct: 195 ATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 254

Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
           +++KD++ W ++I    +HG  K A  LF +M+  S  P+ ITF+A+L ACSH+G+++EG
Sbjct: 255 MESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEG 314

Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
           +K L+ M   Y ++P  EHY C++DLL RA  LEEA + + +M +EP      ALLG CR
Sbjct: 315 QKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCR 374

Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
           +H N ELGE+V K+L+ L P + G Y+L+SN++AA++KW D  +VR  M+ +G+ K PG 
Sbjct: 375 IHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGV 434

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQ 762
           S IE+   +H F+A D SH ES++IY KL EI  +L+   GY A T  VL ++EEE+K  
Sbjct: 435 SVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEH 494

Query: 763 MLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFH 822
            L  HSE+LAIAYG+L       IRI KNLRVC DCH   KL+S+++GRE++VRD NRFH
Sbjct: 495 ALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFH 554

Query: 823 HFEAG 827
           HFE G
Sbjct: 555 HFEDG 559



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 224/496 (45%), Gaps = 62/496 (12%)

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
            T+P VIKAC        G  +H  V+K G++   +IVNSL+ +YA   D   A+QLF  
Sbjct: 1   MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLF-----REMQRVGLVTNAYTFVAALQACEDS 173
             ++ DVV WN++I  Y   G+      +F     R++     + N Y  V  +   +  
Sbjct: 61  CSDR-DVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAK-R 118

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
            F+ +            +NL  +  N++++ + +CG + EA G+  ++  +D VSWNSML
Sbjct: 119 LFDEM----------PERNLVSW--NSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSML 166

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
             + Q     +A+  F +++  G KP +   V+ +SA   LG L  G  LH Y       
Sbjct: 167 ACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIE 226

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
            +  +G  L+DMYAKC  ++   +VF  M ++D ++W TIIAG A +    +A +LF+ +
Sbjct: 227 VNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEM 286

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
           +   ++ + +   ++L ACS           H  ++ +G     +L+ +   YG      
Sbjct: 287 KEASVEPNDITFVAMLSACS-----------HAGMVDEGQK---LLDCMSSSYG------ 326

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN-EANVESDSITLVSALSAA 472
                   IE K V  +  +I      GL  EA+EL   M  E N         SAL A 
Sbjct: 327 --------IEPK-VEHYDCVIDLLARAGLLEEAMELIGTMPMEPN--------PSALGAL 369

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASS---LVDMYARCGALDIANKVFNCVQTKDL- 528
                +    EL   + ++  NL+   +     L ++YA     D A KV N ++   + 
Sbjct: 370 LGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGIS 429

Query: 529 -ILWTSMINANGLHGR 543
            +   S+I   G+  R
Sbjct: 430 KVPGVSVIELKGMVHR 445



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 140/273 (51%), Gaps = 9/273 (3%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A+QLF   S R V +WNAM+  YV  GE       + RM    +  D  ++  +I   A+
Sbjct: 54  AKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAI 109

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           +  +D   ++   + +    S     NS+++ + KC +  +A  LF  M  + DVV WNS
Sbjct: 110 VGKIDEAKRLFDEMPERNLVSW----NSMLSGFVKCGNVEEAFGLFSEMPCR-DVVSWNS 164

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +++ Y+  G+  EAL LF +M+ VG+     T V+ L AC        G+ +H     + 
Sbjct: 165 MLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNR 224

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
             +   V  AL+ MYA+CGK++ A  V   +E+KD ++WN+++ G   +    +A Q F+
Sbjct: 225 IEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFK 284

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           E++ A  +P+ +  V  +SA    G +  G++L
Sbjct: 285 EMKEASVEPNDITFVAMLSACSHAGMVDEGQKL 317



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 108/223 (48%), Gaps = 24/223 (10%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           KCG+V +A  LF ++  R V +WN+ML  Y   G+P   L  + +MR +G+     T   
Sbjct: 140 KCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVS 199

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           ++ ACA L  LD G  +H  +     +    +  +LV MYAKC     A Q+F+ M E +
Sbjct: 200 LLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAM-ESK 258

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
           DV+ WN+II+  +  G   EA  LF+EM+   +  N  TFVA L AC            H
Sbjct: 259 DVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACS-----------H 307

Query: 184 AATVKSGQNL------------QVYVANALIAMYARCGKMTEA 214
           A  V  GQ L            +V   + +I + AR G + EA
Sbjct: 308 AGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEA 350



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 38/80 (47%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A Q+F+ +  + V  WN ++     +G      + +  M+   +  +  T
Sbjct: 238 MYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDIT 297

Query: 61  FPCVIKACAMLKDLDCGAKI 80
           F  ++ AC+    +D G K+
Sbjct: 298 FVAMLSACSHAGMVDEGQKL 317



 Score = 39.3 bits (90), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 42/210 (20%), Positives = 82/210 (39%), Gaps = 37/210 (17%)

Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
           +T    + A +  S+   G  ++  +++ GF  +  + +SL+ +YA    L  A ++F+ 
Sbjct: 1   MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60

Query: 523 VQTKDLILWTSMINA-----------------------------NGLHGRGKV--AIDLF 551
              +D++ W +MI+                              NG    GK+  A  LF
Sbjct: 61  CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLF 120

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
            +M   +     +++ ++L      G + E       M C   +  W    AC     G+
Sbjct: 121 DEMPERNL----VSWNSMLSGFVKCGNVEEAFGLFSEMPC-RDVVSWNSMLACYAQ-CGK 174

Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
            N     +  +R++ ++PT     +LL AC
Sbjct: 175 PNEALALFDQMRAVGVKPTEATVVSLLSAC 204


>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g40410, mitochondrial; Flags: Precursor
 gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
 gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 608

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 213/565 (37%), Positives = 348/565 (61%), Gaps = 8/565 (1%)

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           L  LL+ K + + + + GF+ D  +G  L   +  C       ++F +M  +D +SW ++
Sbjct: 49  LCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCA-----EKLFDEMPERDLVSWNSL 103

Query: 334 IAGYAQNNCHLKALELFRTVQLE--GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
           I+GY+      K  E+   + +   G   + +   S++ AC       + + IHG +++ 
Sbjct: 104 ISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKF 163

Query: 392 G-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           G L ++ ++NA ++ YGK G++  S  +FE +  K++VSW +MI  ++ NGLA + L  F
Sbjct: 164 GVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF 223

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
            +      E D  T ++ L +   + +++  + ++G I+  GF+    + ++L+D+Y++ 
Sbjct: 224 NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKL 283

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G L+ ++ VF+ + + D + WT+M+ A   HG G+ AI  F  M     +PDH+TF  LL
Sbjct: 284 GRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLL 343

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            ACSHSGL+ EGK + E M   Y++DP  +HY+C+VDLLGR+  L++AY  ++ M +EP+
Sbjct: 344 NACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPS 403

Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
           + VW ALLGACRV+ + +LG   A++L EL+P +  NYV++SN+++AS  WKD  ++R  
Sbjct: 404 SGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNL 463

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
           M+  GL +  G S+IE GNKIH F+  D SH ES++I KKL EI +K++ E GY ++T+F
Sbjct: 464 MKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEF 523

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
           VLH+V E+ K +M+  HSE++A+A+G+L  +    I I KNLR+C DCH   K +S +  
Sbjct: 524 VLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEK 583

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           R +++RD+ RFHHF  G CSC DYW
Sbjct: 584 RRIIIRDSKRFHHFLDGSCSCSDYW 608



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 186/407 (45%), Gaps = 28/407 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV--LGISVDAF 59
           Y + G  + AE+LFD++ +R + +WN+++  Y   G   +  E  SRM +  +G   +  
Sbjct: 76  YLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEV 135

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  +I AC      + G  IHGLV+K G      +VN+ +  Y K  D   + +LF+ +
Sbjct: 136 TFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDL 195

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             K ++V WN++I  +  +G   + L  F   +RVG   +  TF+A L++CED     L 
Sbjct: 196 SIK-NLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH   +  G +    +  AL+ +Y++ G++ +++ V +++ + DS++W +ML  +  +
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH 314

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
                A++ F  +   G  PD V   + ++A    G +  GK       K+  +      
Sbjct: 315 GFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRI------ 368

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAG---YAQNNCHLKA 346
           +  +D Y+  C V+ +GR      A   I           W  ++     Y       KA
Sbjct: 369 DPRLDHYS--CMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKA 426

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
            E  R  +LE  D    ++ S + + SGL        I   + +KGL
Sbjct: 427 AE--RLFELEPRDGRNYVMLSNIYSASGL--WKDASRIRNLMKQKGL 469



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 161/336 (47%), Gaps = 7/336 (2%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +H  V+K       FI + LV  Y +      A +LFD M E+ D+V WNS+IS YS  G
Sbjct: 53  LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPER-DLVSWNSLISGYSGRG 111

Query: 140 ---QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
              +C E L     +  VG   N  TF++ + AC     +  G  IH   +K G   +V 
Sbjct: 112 YLGKCFEVLSRMM-ISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVK 170

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V NA I  Y + G +T +  +   L  K+ VSWN+M+   +QN L  K + +F   +  G
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVG 230

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            +PDQ   +  + +   +G +   + +H   +  GF  +  I   L+D+Y+K   +    
Sbjct: 231 HEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSS 290

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            VF+++T+ D ++WT ++A YA +     A++ F  +   G+  D +    +L ACS   
Sbjct: 291 TVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSG 350

Query: 377 CMSQTKEIHGYIIRKGLSD--LVILNAIVDVYGKCG 410
            + + K     + ++   D  L   + +VD+ G+ G
Sbjct: 351 LVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSG 386



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 6/137 (4%)

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
           +L   + V S    + S ++A  S   ++  + L+  +++      G +   LV  Y R 
Sbjct: 20  FLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRL 79

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA--IDLFYKMEAES--FAPDHITF 566
           G    A K+F+ +  +DL+ W S+I  +G  GRG +    ++  +M      F P+ +TF
Sbjct: 80  GHDVCAEKLFDEMPERDLVSWNSLI--SGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTF 137

Query: 567 LALLYACSHSGLINEGK 583
           L+++ AC + G   EG+
Sbjct: 138 LSMISACVYGGSKEEGR 154



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 36/69 (52%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G + D+  +F +++      W AML AY ++G     ++ +  M   GIS D  T
Sbjct: 279 LYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVT 338

Query: 61  FPCVIKACA 69
           F  ++ AC+
Sbjct: 339 FTHLLNACS 347


>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/716 (32%), Positives = 399/716 (55%), Gaps = 5/716 (0%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
           ++N+++      G   +VL+TY  M+     +DA+TFP + KAC  L     G  +H  V
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           +  G     +I +SL++ YAK       R++FD M  K +VV W +II +YS  G    A
Sbjct: 76  VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTM-LKRNVVPWTTIIGSYSREGDIDIA 134

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
             +F++M+  G+   + T ++ L      S   L + +H   +  G    + ++N+++ M
Sbjct: 135 FSMFKQMRESGIQPTSVTLLSLLPGI---SKLPLLLCLHCLIILHGFESDLALSNSMVNM 191

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           Y +CG++ +A  +   ++ +D VSWNS+L+ + +     + +Q  + ++    KPD+   
Sbjct: 192 YGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
            +A+SAS   G+L  GK +H   +K G   D  + + L+ +Y +C C++   +VF   T 
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D + WT +I+G  QN+C  KAL +F  +    +      + S L AC+ L C      I
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371

Query: 385 HGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           HGY++R+G+  D+   N++V +Y KC  +  S ++F  +  KD+VSW ++++ +  NG  
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
           ++ +  F  M ++ +  DSIT+ S L A  S   L +GK ++ F++R          ++L
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           VDMY +CG L+ A K F+C+  +DL+ W+++I   G +G+G++A+  + +       P+H
Sbjct: 492 VDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNH 551

Query: 564 ITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
           + F+++L ACSH GLI++G    E M  D+++ P  EH AC+VDLL RA  ++EAY F +
Sbjct: 552 VIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYK 611

Query: 624 SMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKD 683
            M  EP+  V   LL ACRV+   ELG+++A+ + EL P +PGN+V ++N +A+  +W  
Sbjct: 612 MMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDG 671

Query: 684 VEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLE 739
           VE+   +MR  GLKK PG S IE+     +F A   SH + ++I   +  +++ + 
Sbjct: 672 VEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKIILTVKALSKNIR 727



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 171/580 (29%), Positives = 292/580 (50%), Gaps = 18/580 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +    ++FD + +R V  W  ++G+Y   G+       + +MR  GI   + T 
Sbjct: 94  YAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTL 153

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++     +  L     +H L++  G++S   + NS+V MY KC     AR+LF  + +
Sbjct: 154 LSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQSI-D 209

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D+V WNS++SAYS  G   E L L + M+   +  +  TF +AL A        LG  
Sbjct: 210 CRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKL 269

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +K G N+  +V +AL+ +Y RC  +  A  V      KD V W +M++G VQND 
Sbjct: 270 VHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDC 329

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA+  F ++  +  KP      + ++A  +LG    G  +H Y ++QG + D+   N+
Sbjct: 330 ADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNS 389

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ MYAKC  +     +F +M  +D +SW  I+AG+A+N    K +  F  ++   L  D
Sbjct: 390 LVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPD 449

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFE 420
            + + S+L AC     + Q K IH +++R  L   ++   A+VD+Y KCGN++ ++  F+
Sbjct: 450 SITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFD 509

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  +D+V+W+++I  Y  NG    AL  +       +E + +  +S LSA S   ++ K
Sbjct: 510 CMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISK 569

Query: 481 GKELNGFI---IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKDLILWTSMIN 536
           G  +   +    R   NLE    + +VD+ +R G +D A   +  + +   +++   +++
Sbjct: 570 GLSIYESMTKDFRMSPNLEHR--ACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLD 627

Query: 537 ANGLHGR---GKV-AIDLFYKMEAESFAPDHITFLALLYA 572
           A  ++GR   GKV A D+F   E +   P +   LA  YA
Sbjct: 628 ACRVNGRVELGKVIARDMF---ELKPVDPGNFVQLANSYA 664



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 214/433 (49%), Gaps = 25/433 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + DA +LF  +  R + +WN++L AY   G    +L+    M++  I  D  T
Sbjct: 191 MYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQT 250

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   + A A+  DL  G  +HGL+LK G +    + ++LV +Y +C     A ++F    
Sbjct: 251 FCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTT 310

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK DVV+W ++IS    +    +ALG+F +M    +  +  T  + L AC       +G 
Sbjct: 311 EK-DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGA 369

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   ++ G  L +   N+L+ MYA+C K+ ++  +  ++  KD VSWN+++ G  +N 
Sbjct: 370 SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNG 429

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              K + FF E++ +  +PD +   + + A G  G L  GK +H + ++   +  +    
Sbjct: 430 YLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTET 489

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY KC  +    + F  M  +D ++W+T+I GY  N     AL  +      G++ 
Sbjct: 490 ALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEP 549

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-------------DLVILNAIVDVYG 407
           + +I  SVL ACS           HG +I KGLS             +L     +VD+  
Sbjct: 550 NHVIFISVLSACS-----------HGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLS 598

Query: 408 KCGNIDYSRNVFE 420
           + G +D + + ++
Sbjct: 599 RAGKVDEAYSFYK 611


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 251/714 (35%), Positives = 400/714 (56%), Gaps = 16/714 (2%)

Query: 1   MYGKCGSVLDAEQLFDK-VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
           MYG CG +  A   F    S + V  +N ML AY  NG   R LE Y RM   G   D  
Sbjct: 86  MYGNCGEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKI 145

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD--FIVNSLVAMYAKCYDFRKARQLFD 117
           T+  V+ +C+ +  L    +IH  +++      D   + N+LV MY KC    +AR++FD
Sbjct: 146 TYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFD 205

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            + +  D V W S+IS+Y+ +G C EAL L+++M   G+  ++ TF +AL AC       
Sbjct: 206 GI-KNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKL---V 261

Query: 178 LGMEIHAATVKSGQNLQV-YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            G  IHA  V S  N++  +V +ALI MYARCG ++ A     +++NK  V W S++T +
Sbjct: 262 DGKAIHARIVSS--NMESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAY 319

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           VQ   Y +A+  +  +   G   D V  V A+ A   LG L  GK +H+   + GF S L
Sbjct: 320 VQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQS-L 378

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQM-TAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
            +   L+ MYAKC  ++    VF ++   ++   WT +I+ YAQ     +ALEL+  +  
Sbjct: 379 VVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVA 438

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
           EG   +     +VL ACS    +    +IHG++    L S++ + NA+V +Y KCG+++ 
Sbjct: 439 EGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLEL 498

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +++ FE+   KD+VSW +MI +Y  +GL  EAL+L+  M    V  D +T+ S+LSA + 
Sbjct: 499 AKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAI 558

Query: 475 LSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
              L+ G+E++  +++ + F     V ++LV+MY RCG L+ A  +F  +  +D++ WT+
Sbjct: 559 SGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTA 618

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK-FLEIMRCD 592
           M +A    G     +DL+ +M      P+ ITF ++L  CSH+GL+  G + FLE M+ +
Sbjct: 619 MTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLE-MQSE 677

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
           +++ P  EH+ C+VDLLGR+  L +A   V SM  +P +  W  +LG+C+ HS+ +  + 
Sbjct: 678 HEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKR 737

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            A+++ ELDP N   Y L+S++F A+   ++  +V++ M+  GLKK PG S IE
Sbjct: 738 AARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 791



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 171/566 (30%), Positives = 291/566 (51%), Gaps = 9/566 (1%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           +++ C  L  L  G  +H  +L+ G+    F+ N L+ MY  C +   AR  F      +
Sbjct: 48  LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIK 107

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            V  +N ++SAY  +G    AL L+  M   G   +  T+   L +C          EIH
Sbjct: 108 AVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIH 167

Query: 184 AATVKSGQNLQ--VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           A+ +++ Q ++  + + NAL+ MY +CG + EA  V   ++N+D+VSW SM++ +  N  
Sbjct: 168 ASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGF 227

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             +A+  ++++   G +PD +   +A+ A  +   L++GK +HA  +     SD  +G+ 
Sbjct: 228 CDEALDLYQQMDADGIQPDSITFTSALLACTK---LVDGKAIHARIVSSNMESDF-VGSA 283

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-ALELFRTVQLEGLDA 360
           L++MYA+C  V+   + F ++  +  + WT+++  Y Q  CH + AL+L+  +  EG+ A
Sbjct: 284 LINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQ-TCHYREALDLYGRMDHEGVHA 342

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE 420
           D +   + L AC+ L  + + K IH  +   G   LV+  A++ +Y KCG +D +R VF 
Sbjct: 343 DGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAARAVFN 402

Query: 421 SIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
            +  K +V  WT+MIS+Y   G   EALEL+  M       +  T  + L+A SS   L+
Sbjct: 403 RVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLE 462

Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
            G +++G +         +V ++LV MYA+CG+L++A   F     KDL+ W +MI A  
Sbjct: 463 AGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYA 522

Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
            HG G+ A+DL+  M ++   PD +T  + L AC+ SG +  G++    +  +       
Sbjct: 523 QHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSL 582

Query: 600 EHYACLVDLLGRANHLEEAYQFVRSM 625
                LV++ GR   LE A      M
Sbjct: 583 MVQTALVNMYGRCGRLETARSMFEDM 608


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/539 (38%), Positives = 336/539 (62%), Gaps = 4/539 (0%)

Query: 273 RLGNLLNGKELHAYAIKQGFVSD-LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
           RLG +  G+ +HA+ +   F+ + L + N +++MYAKC C++   R+F +M  +D ++WT
Sbjct: 99  RLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWT 158

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
            +IAG++QNN    AL LF  +   GL  +   + S+L A      +    ++H + ++ 
Sbjct: 159 ALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKY 218

Query: 392 GL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
           G  S + + +A+VD+Y +CG++D ++  F+ + +K  VSW ++IS +   G    AL L 
Sbjct: 219 GYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLL 278

Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
           + M   N +    T  S  SA +S+  L++GK ++  +I+ G  L   + ++L+DMYA+ 
Sbjct: 279 WKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKA 338

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G++D A +VF+ +   D++ W +M+     HG GK  +D F +M      P+ I+FL +L
Sbjct: 339 GSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVL 398

Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
            ACSHSGL++EG  + E+M+  Y+++P   HY   VDLLGR   L+ A +F+R M IEPT
Sbjct: 399 TACSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPT 457

Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
           A VW ALLGACR+H N ELG   A++  ELDP + G  +L+SN++A++ +W+DV +VR  
Sbjct: 458 AAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKM 517

Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
           M+ SG+KK P  SW+EI N +H F+A D++H +  EI  K  EI+ K+ +E GYV  T  
Sbjct: 518 MKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKI-KEIGYVPDTSH 576

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
           VL  V+++E+ + L  HSE+LA+A+ +L +  GS IRI KN+RVC DCH+  K VS+++
Sbjct: 577 VLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKIY 635



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 207/411 (50%), Gaps = 10/411 (2%)

Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG-QNLQ 194
           S  G  L AL L   +QR  LV +   +   L+ C        G  +HA  V S   +  
Sbjct: 66  SDGGTGLYALDL---IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNH 122

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           + + N ++ MYA+CG + +A  +  ++  KD V+W +++ GF QN+    A+  F ++  
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G +P+     + + ASG    L  G +LHA+ +K G+ S + +G+ L+DMYA+C  ++ 
Sbjct: 183 LGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDA 242

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
               F  M  +  +SW  +I+G+A+      AL L   +Q +          SV  AC+ 
Sbjct: 243 AQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACAS 302

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
           +  + Q K +H ++I+ GL  +  + N ++D+Y K G+ID ++ VF+ +   DVVSW +M
Sbjct: 303 IGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTM 362

Query: 434 ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           ++    +GL  E L+ F  M    +E + I+ +  L+A S   +L +G  L  F + K +
Sbjct: 363 LTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEG--LYYFELMKKY 420

Query: 494 NLEGSVAS--SLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMINANGLH 541
            +E  V    + VD+  R G LD A +    +  +    +W +++ A  +H
Sbjct: 421 KVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMH 471



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 185/379 (48%), Gaps = 9/379 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG + DA ++FD++  + + TW A++  +  N  P   L  + +M  LG+  + FT
Sbjct: 132 MYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFT 191

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++KA      LD G ++H   LK GY S+ ++ ++LV MYA+C     A+  FD M 
Sbjct: 192 LSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP 251

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +V  WN++IS ++  G+   AL L  +MQR       +T+ +   AC        G 
Sbjct: 252 TKSEVS-WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGK 310

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KSG  L  ++ N L+ MYA+ G + +A  V  +L   D VSWN+MLTG  Q+ 
Sbjct: 311 WVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHG 370

Query: 241 LYCKAMQFFRELQGAGQKPDQV---CTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           L  + +  F ++   G +P+++   C + A S SG L   L   EL     K     D+ 
Sbjct: 371 LGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK---KYKVEPDVP 427

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTII-AGYAQNNCHLKALELFRTVQL 355
              T +D+  +   ++   R   +M  +   + W  ++ A     N  L      R  +L
Sbjct: 428 HYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFEL 487

Query: 356 EGLDADVMIIGSVLMACSG 374
           +  D+   ++ S + A +G
Sbjct: 488 DPHDSGPRMLLSNIYASAG 506



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 188/387 (48%), Gaps = 26/387 (6%)

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGY-DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           ++K C  L  ++ G  +H  ++   + D+   + N +V MYAKC     AR++FD M  K
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            D+V W ++I+ +S + +  +AL LF +M R+GL  N +T  + L+A         G ++
Sbjct: 153 -DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQL 211

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA  +K G    VYV +AL+ MYARCG M  A      +  K  VSWN++++G  +    
Sbjct: 212 HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEG 271

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
             A+    ++Q    +P      +  SA   +G L  GK +HA+ IK G      IGNTL
Sbjct: 272 EHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTL 331

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +DMYAK   ++   RVF ++   D +SW T++ G AQ+    + L+ F  +   G++ + 
Sbjct: 332 LDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNE 391

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL------------SDLVILNAIVDVYGKCG 410
           +    VL ACS           H  ++ +GL             D+      VD+ G+ G
Sbjct: 392 ISFLCVLTACS-----------HSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVG 440

Query: 411 NIDYSRNVFESIESKDVVS-WTSMISS 436
            +D +      +  +   + W +++ +
Sbjct: 441 LLDRAERFIREMPIEPTAAVWGALLGA 467


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/709 (33%), Positives = 399/709 (56%), Gaps = 10/709 (1%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           T+  +I AC+  + L  G KIH  +L   C YD+   + N +++MY KC   R AR++FD
Sbjct: 66  TYISLICACSSSRSLAQGRKIHDHILNSNCKYDT--ILNNHILSMYGKCGSLRDAREVFD 123

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            M E+ ++V + S+I+ YS +GQ  EA+ L+ +M +  LV + + F + ++AC  +    
Sbjct: 124 FMPER-NLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVV 182

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LG ++HA  +K   +  +   NALIAMY R  +M++A+ V Y +  KD +SW+S++ GF 
Sbjct: 183 LGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFS 242

Query: 238 QNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           Q     +A+   +E+   G   P++    +++ A   L     G ++H   IK     + 
Sbjct: 243 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNA 302

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
             G +L DMYA+C  ++   RVF Q+   D  SW  IIAG A N    +A+ +F  ++  
Sbjct: 303 IAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNS 362

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYS 415
           G   D + + S+L A +    + Q  +IH +II+ G L+DL + N+++ +Y  C ++   
Sbjct: 363 GFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCC 422

Query: 416 RNVFESIESK-DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
            N+FE   +K D VSW +++++ + +    E L LF LM  +  E D IT+ + L     
Sbjct: 423 FNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVE 482

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           +S LK G +++ +  + G  LE  + + L+DMYA+CG+L  A ++F+ +   D++ W+++
Sbjct: 483 ISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTL 542

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I      G G+ A+ LF +M++    P+H+TF+ +L ACSH GL+ EG K   IM+ ++ 
Sbjct: 543 IVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHG 602

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  EH +C+VDLL RA HL EA +F+  M++EP   VW  LL AC+   N +L +  A
Sbjct: 603 ISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAA 662

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
           + +L++DP N   +VL+ ++ A+S  W+D   +R  M+   +KK PG SWI++ +KIH F
Sbjct: 663 ENILKIDPFNSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIF 722

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQM 763
            A D  H E D+IY  L  I  ++  E     + +F    + E EK  +
Sbjct: 723 FAEDVLHPERDDIYTVLHNIWSQMLDECNPQHKKRFQF--IHETEKTNI 769



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 171/582 (29%), Positives = 297/582 (51%), Gaps = 16/582 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ DA ++FD + +R + ++ +++  Y  NG+    +  Y +M    +  D F 
Sbjct: 108 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFA 167

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IKACA   D+  G ++H  V+K    S     N+L+AMY +      A ++F  + 
Sbjct: 168 FGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIP 227

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
            K D++ W+SII+ +S  G   EAL   +EM   G+   N Y F ++L+AC        G
Sbjct: 228 AK-DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYG 286

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH   +K           +L  MYARCG +  A  V  Q+E  D+ SWN ++ G   N
Sbjct: 287 SQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANN 346

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+  F E++ +G  PD +   + + A  +   L  G ++H++ IK GF++DL + 
Sbjct: 347 GYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVC 406

Query: 300 NTLMDMYAKC----CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           N+L+ MY  C    CC N            D +SW  I+    Q+   ++ L LF+ + +
Sbjct: 407 NSLLTMYTFCSDLYCCFNLFEDF---RNKADSVSWNAILTACLQHEQPVEMLRLFKLMLV 463

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
              + D + +G++L  C  +  +    ++H Y  + GL  +  I N ++D+Y KCG++  
Sbjct: 464 SECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQ 523

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           +R +F+S+++ DVVSW+++I  Y  +G   EAL LF  M  + +E + +T V  L+A S 
Sbjct: 524 ARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSH 583

Query: 475 LSILKKGKELNGFI-IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWT 532
           + ++++G +L   +    G +      S +VD+ AR G L+ A +  + ++ + D+++W 
Sbjct: 584 VGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWK 643

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           ++++A    G     +DL  K        D     A +  CS
Sbjct: 644 TLLSACKTQGN----VDLAQKAAENILKIDPFNSTAHVLLCS 681



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 191/381 (50%), Gaps = 11/381 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG +  A ++F+++ +    +WN ++    +NG     +  +S MR  G   DA +
Sbjct: 311 MYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAIS 370

Query: 61  FPCVIKACAMLKDLDC--GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              ++  CA  K +    G +IH  ++KCG+ +   + NSL+ MY  C D      LF+ 
Sbjct: 371 LRSLL--CAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFED 428

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
              K D V WN+I++A     Q +E L LF+ M       +  T    L+ C + S   L
Sbjct: 429 FRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKL 488

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++H  + K+G  L+ ++ N LI MYA+CG + +A  +   ++N D VSW++++ G+ Q
Sbjct: 489 GSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQ 548

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ---GFVSD 295
           +    +A+  FRE++ +G +P+ V  V  ++A   +G +  G +L  YAI Q   G    
Sbjct: 549 SGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKL--YAIMQTEHGISPT 606

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTV 353
            +  + ++D+ A+   +N   R   +M  + D + W T++ A   Q N  L        +
Sbjct: 607 KEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENIL 666

Query: 354 QLEGLDADVMIIGSVLMACSG 374
           +++  ++   ++   + A SG
Sbjct: 667 KIDPFNSTAHVLLCSMHASSG 687


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/585 (35%), Positives = 356/585 (60%), Gaps = 13/585 (2%)

Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD-----LQIGNTLMDMYAKCCCV 312
           + D V     V    R G   +G+ +H +    G +       L + N+L  MYAK   +
Sbjct: 61  RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120

Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-ALELFRTVQLEGLDADVMIIGSVLMA 371
           +   R+F  M  ++ ++WTT++A  A  +   + AL     ++ +G+  +     SVL A
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180

Query: 372 CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
           C+    ++    +H   ++ GL SD+ + ++++D Y K G++D  R VF+ + ++D+V W
Sbjct: 181 CTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVW 237

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
            S+I+ +  +G    A+ELF  M +A   S+  TL S L A + + +L+ G++++  +++
Sbjct: 238 NSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK 297

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
             ++ +  + ++L+DMY +CG+L+ A+ +F+ +  +D+I W++M++    +G+   A+ +
Sbjct: 298 --YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRV 355

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLG 610
           F  M+++  AP+H+T + +L+ACSH+GL+ +G  +   M+  + + P  EH+ C+VDLLG
Sbjct: 356 FDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLG 415

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVL 670
           RA  L+EA +F+  M +EP + +W  LLGACR+H N  L    A+++L+L+P + G  VL
Sbjct: 416 RAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVL 475

Query: 671 ISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKK 730
           +SN +A  R+W D E+    MR  G++K PG SWIE+  ++H FIA D SH  SD I ++
Sbjct: 476 LSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQE 535

Query: 731 LAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITK 790
           L  +  ++ +  GYV QT+FVL ++  E+K  +L  HSE++AI +G + + +G  IRI K
Sbjct: 536 LNRLIGRI-KSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMK 594

Query: 791 NLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           NLR+C DCH+F KLVS+  GR +V+RD  RFHHF+ G CSCGDYW
Sbjct: 595 NLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 214/453 (47%), Gaps = 41/453 (9%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG----------------ISVD 57
           LF ++ ++ V           +   P   L T+SR+ V G                +  D
Sbjct: 4   LFKRLPRKRVAATRRSSRRVHAQPRPHPSLTTFSRLCVEGPLPAALALLSELAAAGLRAD 63

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD-----FIVNSLVAMYAKCYDFRKA 112
             +   ++K C      D G  IH  V   G    D     F+ NSL +MYAK      A
Sbjct: 64  PVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDA 123

Query: 113 RQLFDRMGEKEDVVLWNSIISAY-SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
            ++FD M  + +VV W ++++A  SA G+  EAL     M+R G+  NAYTF + L AC 
Sbjct: 124 LRMFDGMPVR-NVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACT 182

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
                T    +HA+TVK+G +  V+V ++LI  Y + G +     V  ++  +D V WNS
Sbjct: 183 TPGMLT---AVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNS 239

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++ GF Q+     A++ F  ++ AG   +Q    + + A   +  L  G+++HA+ +K  
Sbjct: 240 IIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK-- 297

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           +  DL + N L+DMY KC  +     +F++M  +D ISW+T+++G AQN   ++AL +F 
Sbjct: 298 YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFD 357

Query: 352 TVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVD 404
            ++ +G+  + + +  VL ACS       G       K + G    +        N +VD
Sbjct: 358 LMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHH-----NCMVD 412

Query: 405 VYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
           + G+ G +D +      +    D V W +++ +
Sbjct: 413 LLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGA 445



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 188/371 (50%), Gaps = 14/371 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVS-NGEPLRVLETYSRMRVLGISVDAF 59
           MY K G + DA ++FD +  R V TW  ++ A  S +G     L     MR  G++ +A+
Sbjct: 113 MYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAY 172

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           TF  V+ AC     L     +H   +K G DS  F+ +SL+  Y K  D    R++FD M
Sbjct: 173 TFSSVLGACTTPGML---TAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEM 229

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + D+V+WNSII+ ++ SG  + A+ LF  M+  G  +N  T  + L+AC        G
Sbjct: 230 VTR-DLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAG 288

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++HA  +K  ++L ++  NAL+ MY +CG + +A  + +++  +D +SW++M++G  QN
Sbjct: 289 RQVHAHVLKYDRDLILH--NALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQN 346

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY-AIKQ--GFVSDL 296
               +A++ F  ++  G  P+ V  V  + A    G + +G   H + ++K+  G   + 
Sbjct: 347 GKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDG--WHYFRSMKRLFGIQPER 404

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQ 354
           +  N ++D+  +   ++      + M+ + D + W T++ A     N  L A      ++
Sbjct: 405 EHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILK 464

Query: 355 LEGLDADVMII 365
           LE  D    ++
Sbjct: 465 LEPDDQGARVL 475


>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/439 (45%), Positives = 290/439 (66%), Gaps = 1/439 (0%)

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           ++ NA+VD+Y K G  DY+ +VFE +  KDV+SWTS+++  VHNG   EAL LF  M   
Sbjct: 3   LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +  D I + + LSA + L++L+ GK+++   ++ G     SV +SLV MYA+CG ++ A
Sbjct: 63  GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
           NKVF+ ++ +D+I WT++I     +GRG+ +++ +  M A    PD ITF+ LL+ACSH+
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           GL+  G+ + + M   Y + P PEHYAC++DLLGR+  L EA + +  M ++P A VW A
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 242

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL ACRVH N ELGE  A  L EL+P N   YVL+SN+++A+ KW++  + R  M+  G+
Sbjct: 243 LLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGV 302

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
            K PG SWIE+ +K+H F++ D+SH  + EIY K+ EI   L +E GYV    F LH+++
Sbjct: 303 SKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIM-ILIKEAGYVPDMNFALHDMD 361

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EE K   L  HSE+LA+A+G+L    G+ IRI KNLR+C DCH+  K VS +F R +++R
Sbjct: 362 EEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILR 421

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D+N FHHF  G CSC DYW
Sbjct: 422 DSNCFHHFREGACSCSDYW 440



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 160/299 (53%), Gaps = 10/299 (3%)

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N L+DMYAK    +Y   VF +MT +D ISWT+++ G   N  + +AL LF  +++ G
Sbjct: 4   VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
           +  D ++I +VL AC+ L  +   K++H   ++ GL S L + N++V +Y KCG I+ + 
Sbjct: 64  IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF+S+E +DV++WT++I  Y  NG   E+L  +  M  + V+ D IT +  L A S   
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183

Query: 477 ILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSM 534
           +++ G+          G        + ++D+  R G L  A ++ N +  + D  +W ++
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 243

Query: 535 INANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           + A  +HG    G+ A +  +++E ++  P     L+ LY  S +G   E  K   +M+
Sbjct: 244 LAACRVHGNVELGERAANNLFELEPKNAVP--YVLLSNLY--SAAGKWEEAAKTRRLMK 298



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 128/248 (51%), Gaps = 13/248 (5%)

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V NAL+ MYA+ G    A  V  ++ +KD +SW S++TG V N  Y +A++ F E++  G
Sbjct: 4   VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
             PDQ+     +SA   L  L  GK++HA  +K G  S L + N+L+ MYAKC C+    
Sbjct: 64  IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS--- 373
           +VF  M  QD I+WT +I GYAQN    ++L  +  +   G+  D +    +L ACS   
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183

Query: 374 ----GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVV 428
               G       +E++G  I+ G      +   +D+ G+ G +  ++ +   +    D  
Sbjct: 184 LVEHGRSYFQSMEEVYG--IKPGPEHYACM---IDLLGRSGKLMEAKELLNQMAVQPDAT 238

Query: 429 SWTSMISS 436
            W +++++
Sbjct: 239 VWKALLAA 246



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 25/248 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G    A  +F+K++ + V +W +++   V NG     L  +  MR++GI  D   
Sbjct: 11  MYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIV 70

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA L  L+ G ++H   LK G  S+  + NSLV+MYAKC     A ++FD M 
Sbjct: 71  IAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM- 129

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E +DV+ W ++I  Y+ +G+  E+L  + +M   G+  +  TF+  L AC          
Sbjct: 130 EIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACS--------- 180

Query: 181 EIHAATVKSGQNL-----QVYVANA-------LIAMYARCGKMTEAAGVLYQLE-NKDSV 227
             HA  V+ G++      +VY           +I +  R GK+ EA  +L Q+    D+ 
Sbjct: 181 --HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDAT 238

Query: 228 SWNSMLTG 235
            W ++L  
Sbjct: 239 VWKALLAA 246



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 128/246 (52%), Gaps = 19/246 (7%)

Query: 93  DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQ 152
           + + N+LV MYAK   F  A  +F++M +K DV+ W S+++    +G   EAL LF EM+
Sbjct: 2   ELVNNALVDMYAKXGYFDYAFDVFEKMTDK-DVISWTSLVTGCVHNGSYEEALRLFCEMR 60

Query: 153 RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMT 212
            +G+  +     A L AC + +    G ++HA  +KSG    + V N+L++MYA+CG + 
Sbjct: 61  IMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIE 120

Query: 213 EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG 272
           +A  V   +E +D ++W +++ G+ QN    +++ F+ ++  +G KPD +  +  + A  
Sbjct: 121 DANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACS 180

Query: 273 RLGNLLNGKEL-----HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
             G + +G+         Y IK G            + YA  C ++ +GR    M A++ 
Sbjct: 181 HAGLVEHGRSYFQSMEEVYGIKPG-----------PEHYA--CMIDLLGRSGKLMEAKEL 227

Query: 328 ISWTTI 333
           ++   +
Sbjct: 228 LNQMAV 233


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/548 (40%), Positives = 327/548 (59%), Gaps = 22/548 (4%)

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+  Y +   ++   +VF +M  ++ +SWT +I GY Q     +A  LF  +    + 
Sbjct: 29  NGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVV 88

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
           +  +++G       GL    +  E         + D+V    ++D     G +  +R +F
Sbjct: 89  SWTVMLG-------GLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIF 141

Query: 420 ESIESKDVVSWTSMISS-------------YVHNGLANEALELFYLMNEANVESDSITLV 466
           + +  ++VV+WTSMIS              Y   G   EAL LF LM    V     +++
Sbjct: 142 DEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVI 201

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           S LS   SL+ L  G++++  ++R  F+++  V+S L+ MY +CG L  A +VF+   +K
Sbjct: 202 SVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSK 261

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           D+++W S+I     HG G+ A+++F+ M + S APD ITF+ +L ACS++G + EG +  
Sbjct: 262 DIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIF 321

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
           E M+  YQ+DP  EHYAC+VDLLGRA  L EA   + +M +E  A VW ALLGACR H N
Sbjct: 322 ESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKN 381

Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
            +L EI AKKLL+L+P N G Y+L+SN++++  +WKDV ++R  MR   L+K+PG SWIE
Sbjct: 382 LDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIE 441

Query: 707 IGNKIHSFI-ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
           +  K+H F      SH E + I KKL ++   L RE GY     FV+H+V+EEEKV  L 
Sbjct: 442 VDKKVHIFSGGGSTSHPEHEMILKKLGKLGALL-REAGYCPDGSFVMHDVDEEEKVHSLR 500

Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
            HSE+LA+AYG+LK  EG  IR+ KNLRVC D HS  KL++++ GRE+++RD NRFHHF+
Sbjct: 501 DHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFK 560

Query: 826 AGVCSCGD 833
            G+CSC D
Sbjct: 561 DGLCSCSD 568



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 175/387 (45%), Gaps = 31/387 (8%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y + G + +A ++FDK+ +R V +W AM+  YV  G        + RM            
Sbjct: 35  YVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERN-------- 86

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR--KARQLFDRM 119
             V+    ML  L    ++              +V S   +   C + R  +AR++FD M
Sbjct: 87  --VVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEM 144

Query: 120 -------------GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
                        GEK+D   W+++I  Y   G  LEAL LF  MQR G+  +  + ++ 
Sbjct: 145 PQRNVVAWTSMISGEKDDGT-WSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISV 203

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L  C   +    G ++H+  V+S  ++ +YV++ LI MY +CG +  A  V  +  +KD 
Sbjct: 204 LSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDI 263

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           V WNS++ G+ Q+    KA++ F ++  +   PD++  +  +SA    G +  G E+   
Sbjct: 264 VMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFE- 322

Query: 287 AIKQGFVSDLQIGN--TLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNC 342
           ++K  +  D +  +   ++D+  +   +N    +   M  + D I W  ++ A     N 
Sbjct: 323 SMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNL 382

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVL 369
            L  +   + +QLE  +A   I+ S L
Sbjct: 383 DLAEIAAKKLLQLEPNNAGPYILLSNL 409



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 167/356 (46%), Gaps = 25/356 (7%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N LV+ Y +     +AR++FD+M E+ +VV W ++I  Y   G   EA  LF  M    +
Sbjct: 29  NGLVSGYVQNGMISEARKVFDKMPER-NVVSWTAMIRGYVQEGLIEEAELLFWRMPERNV 87

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           V+        +   ED   +          VK      V  +  +I      G++ EA  
Sbjct: 88  VSWTVMLGGLI---EDGRVDEARQLFDMMPVK-----DVVASTNMIDGLCSEGRLIEARE 139

Query: 217 VLYQLENKDSVSWNSMLTG-------------FVQNDLYCKAMQFFRELQGAGQKPDQVC 263
           +  ++  ++ V+W SM++G             + +     +A+  F  +Q  G +P    
Sbjct: 140 IFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPS 199

Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
            ++ +S  G L +L +G+++H+  ++  F  D+ + + L+ MY KC  +    RVF + +
Sbjct: 200 VISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFS 259

Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE 383
           ++D + W +IIAGYAQ+    KALE+F  +    +  D +    VL ACS    + +  E
Sbjct: 260 SKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLE 319

Query: 384 IHGYIIRKGLSDLVILN--AIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
           I   +  K   D    +   +VD+ G+ G ++ + N+ E++  + D + W +++ +
Sbjct: 320 IFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGA 375



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG ++ A+++FD+ S + +  WN+++  Y  +G   + LE +  M    I+ D  T
Sbjct: 241 MYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEIT 300

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC+    +  G +I   +  K   D        +V +  +     +A  L + M
Sbjct: 301 FIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENM 360

Query: 120 GEKEDVVLWNSIISA 134
             + D ++W +++ A
Sbjct: 361 PVEADAIVWGALLGA 375



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/219 (21%), Positives = 98/219 (44%), Gaps = 37/219 (16%)

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANV---------------- 458
           +R +F+ +   + +SW  ++S YV NG+ +EA ++F  M E NV                
Sbjct: 13  ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLI 72

Query: 459 -ESDSITLVSALSAASSLSILKKGKELNGFI--IRKGFNL---EGSVASS-LVDMYARCG 511
            E++ +          S +++  G   +G +   R+ F++   +  VAS+ ++D     G
Sbjct: 73  EEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEG 132

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV-------------AIDLFYKMEAES 558
            L  A ++F+ +  ++++ WTSMI+     G                 A+ LF  M+ E 
Sbjct: 133 RLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREG 192

Query: 559 FAPDHITFLALLYACSHSGLINEGKKF-LEIMRCDYQLD 596
             P   + +++L  C     ++ G++   +++R  + +D
Sbjct: 193 VRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDID 231


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/583 (38%), Positives = 329/583 (56%), Gaps = 31/583 (5%)

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           ++HA   + G      +   L   YA    ++Y   +F +        WT II G+A   
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACS---GLKCMSQTKEIHGY----IIRKGLS 394
            H +AL  +  +  +G++ +     S+L  C    G    SQ  ++ G+     +R GL 
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKL-GFDSDLYVRTGLL 166

Query: 395 D----------------------LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
           D                      LV L A++  Y K G +D +R +F+ +E +D V W  
Sbjct: 167 DVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNV 226

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           MI  Y  NG+ NEAL LF  M +A  + + +T++S LSA   L  L+ G+ ++ +I   G
Sbjct: 227 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 286

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
                 V ++LVDMY++CG+L+ A  VF+ +  KD++ W SMI    +HG  + A+ LF 
Sbjct: 287 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFK 346

Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
            M      P +ITF+ +L AC HSG + EG      M+ +Y ++P  EHY C+V+LLGRA
Sbjct: 347 SMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRA 406

Query: 613 NHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLIS 672
            H+E+AY+ V++M IEP   +W  LLGACR+H    LGE + + L++ +  N G Y+L+S
Sbjct: 407 GHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLS 466

Query: 673 NVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLA 732
           N++AA   W  V ++R  M+ SG+KK PG S IE+ NK+H F+A   +H +  EIY  L 
Sbjct: 467 NIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLE 526

Query: 733 EITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNL 792
           EI   L+   GY  QT  VLH++ E EK + L  HSE+LAIA+G++ +  G+ I+I KNL
Sbjct: 527 EINGWLKSH-GYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNL 585

Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           RVC DCH   KL+S++ GR++VVRD NRFHHF  G CSCGDYW
Sbjct: 586 RVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 198/442 (44%), Gaps = 67/442 (15%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G +  +  LF +    +VF W A++  +   G   + L  Y++M   G+  +AFTF
Sbjct: 72  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 131

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++K C     ++ G  +H   +K G+DS  ++   L+ +YA+  D   A+QLFD M E
Sbjct: 132 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 187

Query: 122 K------------------------------EDVVLWNSIISAYSASGQCLEALGLFREM 151
           K                               D V WN +I  Y+ +G   EAL LFR M
Sbjct: 188 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 247

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
            +     N  T ++ L AC        G  +H+    +G    V+V  AL+ MY++CG +
Sbjct: 248 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 307

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
            +A  V  ++++KD V+WNSM+ G+  +    +A+Q F+ +   G  P  +  +  +SA 
Sbjct: 308 EDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 367

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
           G  G +  G ++    +K  +  + +I     + Y   C VN +GR              
Sbjct: 368 GHSGWVTEGWDIFN-KMKDEYGIEPKI-----EHYG--CMVNLLGR-------------- 405

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
              AG+ +     +A EL + + +E    D ++ G++L AC     ++  ++I   ++ +
Sbjct: 406 ---AGHVE-----QAYELVKNMNIE---PDPVLWGTLLGACRLHGKIALGEKIVELLVDQ 454

Query: 392 GLSDLVILNAIVDVYGKCGNID 413
            L++      + ++Y   GN D
Sbjct: 455 NLANSGTYILLSNIYAAVGNWD 476



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 205/436 (47%), Gaps = 54/436 (12%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           +IH ++ + G D    +   L   YA       +  LF R  +   V  W +II  ++  
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRT-QNPSVFFWTAIIHGHALR 106

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G   +AL  + +M   G+  NA+TF + L+ C        G  +H+  VK G +  +YV 
Sbjct: 107 GLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEP----GKALHSQAVKLGFDSDLYVR 162

Query: 199 NALIAMYARCGKMT------------------------------EAAGVLYQ-LENKDSV 227
             L+ +YAR G +                               +AA VL+  +E +D V
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 222

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
            WN M+ G+ QN +  +A+  FR +  A  KP++V  ++ +SA G+LG L +G+ +H+Y 
Sbjct: 223 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
              G   ++ +G  L+DMY+KC  +     VF ++  +D ++W ++I GYA +    +AL
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342

Query: 348 ELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILN 400
           +LF+++   GL    +    +L AC        G    ++ K+ +G  I   +       
Sbjct: 343 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYG--IEPKIEH---YG 397

Query: 401 AIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNG---LANEALELFYLMNEA 456
            +V++ G+ G+++ +  + +++    D V W +++ +   +G   L  + +EL    N A
Sbjct: 398 CMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA 457

Query: 457 NVESDSITLVSALSAA 472
           N  S +  L+S + AA
Sbjct: 458 N--SGTYILLSNIYAA 471



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 36/240 (15%)

Query: 376 KCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           K +S   +IH  + R GL    ILN  +   Y   G +DYS  +F   ++  V  WT++I
Sbjct: 41  KTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAII 100

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
             +   GL  +AL  +  M    VE ++ T  S L     L  ++ GK L+   ++ GF+
Sbjct: 101 HGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSIL----KLCPIEPGKALHSQAVKLGFD 156

Query: 495 LEGSVASSLVDMYARC-------------------------------GALDIANKVFNCV 523
            +  V + L+D+YAR                                G LD A  +F+ +
Sbjct: 157 SDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGM 216

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           + +D + W  MI+    +G    A+ LF +M      P+ +T L++L AC   G +  G+
Sbjct: 217 EERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGR 276



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 3/147 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA  +FDK+  + V  WN+M+  Y  +G     L+ +  M  +G+     T
Sbjct: 300 MYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNIT 359

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC     +  G  I + +  + G +        +V +  +     +A +L   M
Sbjct: 360 FIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNM 419

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALG 146
             + D VLW +++ A    G+   ALG
Sbjct: 420 NIEPDPVLWGTLLGACRLHGKI--ALG 444


>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
          Length = 668

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/564 (37%), Positives = 350/564 (62%), Gaps = 10/564 (1%)

Query: 280 GKELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           G++LH  A++ G F SD    + L+ MY  C       R F ++   + +  T + +G  
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ--TKEIHGYIIRKGLSDL 396
           +NN     L +FR++   G    V    +++   +  +   +  T  IH  + + GL   
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226

Query: 397 V-ILNAIVDVYGKCGNIDY--SRNVFESIESKDVVSWTSMISSYVHNGLANEALELF--Y 451
             + N I+D Y K G  D   +R +F+ ++ +DVVSW +MI+ Y  NGL+ EAL L+   
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFDMMD-RDVVSWNTMIALYAQNGLSTEALGLYSKM 285

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
           L+   +V  +++TL + L A +    ++ GK ++  ++R G      V +S+VDMY++CG
Sbjct: 286 LIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCG 345

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            +++A K F  ++ K+++ W++MI   G+HG G+ A+ +F  M      P++ITF+ +L 
Sbjct: 346 KVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLA 405

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           ACSH+GL++EG+ +   M+ ++ ++P  EHY C+VDLLGRA  L+EAY  ++ M+++P A
Sbjct: 406 ACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 465

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
            +W ALL ACR++ N EL +I A++L ELD  N G YVL+SN++A +  WK+VE++R+ +
Sbjct: 466 ALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLV 525

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
           +  G++K PG S +E+  K H F   DKSH +  EIY  L ++ E++  + GYV  T  V
Sbjct: 526 KTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIH-DAGYVPNTGSV 584

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           LH+++ EE+  ML  HSE+LA+A+ ++ S +GS+I + KNLRVC DCH+  K++++L GR
Sbjct: 585 LHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGR 644

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E+++RD  RFHHF+ G+CSCGDYW
Sbjct: 645 EIIIRDLKRFHHFKDGLCSCGDYW 668



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 193/369 (52%), Gaps = 11/369 (2%)

Query: 179 GMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           G ++H   ++SG      Y A+AL+ MY  C +  +A     ++   + V   +M +G +
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 238 QNDLYCKAMQFFRELQGAGQKP--DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +N+L    +  FR +  +G     D+   + A+SAS R+ +      +HA   K G    
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226

Query: 296 LQIGNTLMDMYAKCCCVNY-MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
             + NT++D YAK    +    R  + M  +D +SW T+IA YAQN    +AL L+  + 
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFDMMDRDVVSWNTMIALYAQNGLSTEALGLYSKML 286

Query: 355 LEGLDA--DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGN 411
           + G D   + + + +VL+AC+    +   K IH  ++R GL D V +  ++VD+Y KCG 
Sbjct: 287 IVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGK 346

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           ++ +   F+ I+ K+++SW++MI+ Y  +G   EAL +F  M ++ ++ + IT ++ L+A
Sbjct: 347 VEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAA 406

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DL 528
            S   +L +G+      ++  F +E  V     +VD+  R G LD A  +   ++ K D 
Sbjct: 407 CSHAGLLSEGRYWYN-TMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 465

Query: 529 ILWTSMINA 537
            LW ++++A
Sbjct: 466 ALWGALLSA 474



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 8/287 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS--VDA 58
           MY  C   LDA + FD++         AM    + N      L  +  M   G +  VD 
Sbjct: 133 MYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFRSMVASGSAGVVDE 192

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC--YDFRKARQLF 116
                 + A A + D      IH LV K G D    + N+++  YAK   +D   AR+LF
Sbjct: 193 AAALVALSASARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLF 252

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG--LVTNAYTFVAALQACEDSS 174
           D M    DVV WN++I+ Y+ +G   EALGL+ +M  VG  +  NA T  A L AC  + 
Sbjct: 253 DMM--DRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAG 310

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
               G  IH   V+ G    VYV  +++ MY++CGK+  A     +++ K+ +SW++M+ 
Sbjct: 311 AIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIA 370

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
           G+  +    +A+  F +++ +G KP+ +  +  ++A    G L  G+
Sbjct: 371 GYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGR 417



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 180/376 (47%), Gaps = 24/376 (6%)

Query: 77  GAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
           G ++H L L+ G + S  +  ++L+ MY  C+    AR+ FD +     V++  ++ S  
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIV-TAMASGC 165

Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME--IHAATVKSGQNL 193
             +      L +FR M   G         A +     +     G+   IHA   K G + 
Sbjct: 166 MRNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDG 225

Query: 194 QVYVANALIAMYARCGKMT-EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
           Q  VAN +I  YA+ G     AA  L+ + ++D VSWN+M+  + QN L  +A+  + ++
Sbjct: 226 QTGVANTIIDAYAKGGGHDLGAARKLFDMMDRDVVSWNTMIALYAQNGLSTEALGLYSKM 285

Query: 253 QGAGQKPDQVCTVNAVSASGRL------GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
              G   D  C  NAV+ S  L      G +  GK +H   ++ G   ++ +G +++DMY
Sbjct: 286 LIVGG--DVRC--NAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMY 341

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
           +KC  V    + F ++  ++ +SW+ +IAGY  +    +AL +F  ++  GL  + +   
Sbjct: 342 SKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFI 401

Query: 367 SVLMACSGLKCMSQTKEIHGYI-----IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFES 421
           +VL ACS    +S+ +  +  +     I  G+        +VD+ G+ G +D +  + + 
Sbjct: 402 TVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEH---YGCMVDLLGRAGCLDEAYGLIKE 458

Query: 422 IESK-DVVSWTSMISS 436
           ++ K D   W +++S+
Sbjct: 459 MKVKPDAALWGALLSA 474


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/650 (36%), Positives = 371/650 (57%), Gaps = 12/650 (1%)

Query: 195 VYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
           V+  NALIA YA+   +  A  +  Q+   D VS+N+++  +        A+  F E++ 
Sbjct: 74  VFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMRE 133

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
            G   D       ++A      L+  ++LH+ A   GF S + + N+L+  Y+K   +  
Sbjct: 134 MGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEE 191

Query: 315 MGRVFYQM--TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMAC 372
              VF  M    +D +SW ++I  Y Q+   LKAL L+R +   G + D+  + SVL   
Sbjct: 192 AEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTF 251

Query: 373 SGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCG-NIDYSRNVFESIESKDVVSW 430
           S ++ +S   + H   I+ G + +  + + ++D+Y KCG  +  SR VFE I   D+V W
Sbjct: 252 SCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVW 311

Query: 431 TSMISSYVHNG-LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
            +MIS Y  N  L+ EALE F  M  A    D  + V A+SA S+LS   +GK+ +   +
Sbjct: 312 NTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAM 371

Query: 490 RKGF-NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           +    + + SV ++LV MY++CG L  A K+F  +   + +   S+I     HG G  ++
Sbjct: 372 KSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESL 431

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
           +LF +M A S AP  IT +++L AC+H+G + EGKK+  +M+  + ++P  EHY+C++DL
Sbjct: 432 NLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDL 491

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
           LGRA  L EA + + +M   P +  W ALLGACR + N EL E  A + L+L+P N   Y
Sbjct: 492 LGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPY 551

Query: 669 VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
           ++++++++A+RKW++  ++R  MR  G++K PG SWIE+  ++H F+A D SH    EI+
Sbjct: 552 IMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIH 611

Query: 729 KKLAEITEKLEREGGYVAQTQFVL---HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSL 785
             L E+  K++R  GYV   ++         E+EK  ML  HSE+LA+A+G+L +  G  
Sbjct: 612 MYLDEMFVKMKR-AGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEP 670

Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + + KNLR+C DCH+  K +S +  R++ VRDA RFH FE G CSCGDYW
Sbjct: 671 LLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 166/575 (28%), Positives = 289/575 (50%), Gaps = 53/575 (9%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC------------- 106
           +F  ++K+C   KDL  G  +H + LK    S+ ++ N  + +Y+KC             
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69

Query: 107 -----YDFRK-------------ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
                + F               A  LFD++  + D+V +N++I+AY+  G  L AL LF
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQI-PQPDLVSFNTLINAYADRGDTLSALSLF 128

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
            EM+ +GLV + +TF   + AC   +   L  ++H+    SG +  V V N+L+  Y++ 
Sbjct: 129 GEMREMGLVMDGFTFSGVITAC--CNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKN 186

Query: 209 GKMTEAAGVLYQL--ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVN 266
           G + EA  V   +  E +D VSWNSM+  + Q+    KA+  +R++   G + D     +
Sbjct: 187 GILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLAS 246

Query: 267 AVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC-CCVNYMGRVFYQMTAQ 325
            ++    + +L  G + HA AIK GF  +  +G+ L+DMYAKC   ++   +VF ++   
Sbjct: 247 VLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGS 306

Query: 326 DFISWTTIIAGYAQNN-CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           D + W T+I+GY+QN    ++ALE FR +Q  G   D       + ACS L   SQ K+ 
Sbjct: 307 DLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQF 366

Query: 385 HGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
           H   ++  +  + + + NA+V +Y KCGN+  +R +F+ +   + V+  S+I+ Y  +G+
Sbjct: 367 HALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGI 426

Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK---GFNLEGSV 499
             E+L LF  M  A++   SITLVS LSA +    +++GK+   F + K   G   E   
Sbjct: 427 GTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKY--FNMMKDIFGIEPEAEH 484

Query: 500 ASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKV---AIDLFYKME 555
            S ++D+  R G L  A ++ + +  +     W +++ A   +G  ++   A + F ++E
Sbjct: 485 YSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLE 544

Query: 556 AESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
             +  P     LA +Y+ +      E  +  ++MR
Sbjct: 545 PTNAVP--YIMLASMYSAARKW--EEAARIRKLMR 575



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 248/486 (51%), Gaps = 23/486 (4%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K   +  A  LFD++ Q  + ++N ++ AY   G+ L  L  +  MR +G+ +D FTF
Sbjct: 84  YAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTF 143

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             VI AC     +    ++H L    G+DS   + NSL+  Y+K     +A  +F+ MGE
Sbjct: 144 SGVITACC--NHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGE 201

Query: 122 K-EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +  D V WNS+I AY    + L+AL L+R+M   G   + +T  + L         + G+
Sbjct: 202 EVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGL 261

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGK-MTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           + HA  +K+G N   +V + LI MYA+CG  M+E+  V  ++   D V WN+M++G+ QN
Sbjct: 262 QFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQN 321

Query: 240 -DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD-LQ 297
            +L  +A++ FR++Q AG  PD    V A+SA   L +   GK+ HA A+K    S+ + 
Sbjct: 322 KELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQIS 381

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           + N L+ MY+KC  +    ++F +M   + ++  +IIAGYAQ+    ++L LF  +    
Sbjct: 382 VNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAAS 441

Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
           +    + + S+L AC+       G K  +  K+I G        +    + ++D+ G+ G
Sbjct: 442 IAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGI-----EPEAEHYSCMIDLLGRAG 496

Query: 411 NIDYSRNVFESIE-SKDVVSWTSMISS---YVHNGLANEALELFYLMNEANVESDSITLV 466
            +  +  + +++  S    +W +++ +   Y +  LA +A   F  +   N     I L 
Sbjct: 497 KLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNA-VPYIMLA 555

Query: 467 SALSAA 472
           S  SAA
Sbjct: 556 SMYSAA 561



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++ DA +LF ++ Q    T N+++  Y  +G     L  + +M    I+  + T
Sbjct: 389 MYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSIT 448

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              ++ ACA    ++ G K   ++    G +      + ++ +  +     +A +L D M
Sbjct: 449 LVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTM 508

Query: 120 GEKEDVVLWNSIISA 134
                   W +++ A
Sbjct: 509 PFSPGSAAWAALLGA 523


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/543 (37%), Positives = 337/543 (62%), Gaps = 34/543 (6%)

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           +  SW ++IA  A++   ++AL  F +++   L  +       + +CS L  +   ++ H
Sbjct: 40  NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99

Query: 386 GYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHN---- 440
              +  G   DL + +A+VD+Y KCG +  +R +F+ I  +++VSWTSMI+ YV N    
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159

Query: 441 ---------------------------GLANEALELFYLM-NEANVESDSITLVSALSAA 472
                                      G++ E++E+F+ M  +  +  +++TL + L A 
Sbjct: 160 RALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 219

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
           +     + GK ++  +I+ G      V +S++DMY +CG +++A K F+ ++ K++  W+
Sbjct: 220 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWS 279

Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
           +M+   G+HG  K A+++FY+M      P++ITF+++L ACSH+GL+ EG  + + M  +
Sbjct: 280 AMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHE 339

Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEI 652
           + ++P  EHY C+VDLLGRA +L+EA+  ++ M++ P   VW ALLGACR+H N +LGEI
Sbjct: 340 FDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEI 399

Query: 653 VAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIH 712
            A+KL ELDP N G YVL+SN++A + +W+DVE++R+ M+ SGL K PG S ++I  ++H
Sbjct: 400 SARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVH 459

Query: 713 SFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLA 772
            F+  D+ H + ++IY+ L +++ KL+ E GYV     VLH+V  EEK  +L  HSE+LA
Sbjct: 460 VFLVGDREHPQHEKIYEYLEKLSMKLQ-EVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLA 518

Query: 773 IAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCG 832
           +A+G++ +  G+ I I KNLRVC DCH+  K +S++  RE+VVRD+ RFHHF  G+CSCG
Sbjct: 519 VAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCG 578

Query: 833 DYW 835
           DYW
Sbjct: 579 DYW 581



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 183/380 (48%), Gaps = 42/380 (11%)

Query: 14  LFDK-VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
           LF+K V +  VF+WN+++     +G+ +  L  +S MR L +  +  TFPC IK+C+ L 
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90

Query: 73  DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK---------- 122
           DL  G + H   L  G++   F+ ++LV MY+KC + R AR LFD +  +          
Sbjct: 91  DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150

Query: 123 --------------------EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAY 161
                                DV+ WNSII+ Y+ +G   E++ +F  M + G +  NA 
Sbjct: 151 GYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV 210

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           T  A L AC  S  + LG  IH   +K G    V+V  ++I MY +CGK+  A     ++
Sbjct: 211 TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 270

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
             K+  SW++M+ G+  +    +A++ F E+  AG KP+ +  V+ ++A    G L  G 
Sbjct: 271 REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG- 329

Query: 282 ELHAY-AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
             H + A+   F  D++ G   ++ Y   C V+ +GR  Y   A D I    +   +   
Sbjct: 330 -WHWFKAMSHEF--DVEPG---VEHYG--CMVDLLGRAGYLKEAFDLIKGMKLRPDFVVW 381

Query: 341 NCHLKALELFRTVQLEGLDA 360
              L A  + + V L  + A
Sbjct: 382 GALLGACRMHKNVDLGEISA 401



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 186/357 (52%), Gaps = 37/357 (10%)

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
           ++  +  SWNS++    ++    +A++ F  ++    KP++     A+ +   L +L +G
Sbjct: 36  VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKC-----------------------CCVNYMG- 316
           ++ H  A+  GF  DL + + L+DMY+KC                           Y+  
Sbjct: 96  RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 155

Query: 317 -------RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSV 368
                  RVF  M  +D ISW +IIA YAQN    +++E+F  +  +G ++ + + + +V
Sbjct: 156 DDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 215

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
           L+AC+        K IH  +I+ GL S++ +  +I+D+Y KCG ++ +R  F+ +  K+V
Sbjct: 216 LLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNV 275

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
            SW++M++ Y  +G A EALE+FY MN A V+ + IT VS L+A S   +L++G      
Sbjct: 276 KSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKA 335

Query: 488 IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLH 541
           +  + F++E  V     +VD+  R G L  A  +   ++ + D ++W +++ A  +H
Sbjct: 336 MSHE-FDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 391



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 121/271 (44%), Gaps = 43/271 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVL----------------- 43
           MY KCG + DA  LFD++S R + +W +M+  YV N +  R L                 
Sbjct: 120 MYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSI 179

Query: 44  --------------ETYSRMRVLG-ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
                         E + RM   G I+ +A T   V+ ACA       G  IH  V+K G
Sbjct: 180 IAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG 239

Query: 89  YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
            +S  F+  S++ MY KC     AR+ FDRM EK +V  W+++++ Y   G   EAL +F
Sbjct: 240 LESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK-NVKSWSAMVAGYGMHGHAKEALEVF 298

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEI-----HAATVKSGQNLQVYVANALIA 203
            EM   G+  N  TFV+ L AC  +     G        H   V+ G    V     ++ 
Sbjct: 299 YEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPG----VEHYGCMVD 354

Query: 204 MYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           +  R G + EA  ++  ++   D V W ++L
Sbjct: 355 LLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 385



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 137/291 (47%), Gaps = 42/291 (14%)

Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
           ++  +V SW S+I+    +G + EAL  F  M + +++ +  T   A+ + S+L  L  G
Sbjct: 36  VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95

Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---- 537
           ++ +   +  GF  +  V+S+LVDMY++CG L  A  +F+ +  ++++ WTSMI      
Sbjct: 96  RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 155

Query: 538 ----------NGL-----------------HGRGKVAIDLFYKMEAE-SFAPDHITFLAL 569
                     +G+                 +G    ++++F++M  +     + +T  A+
Sbjct: 156 DDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 215

Query: 570 LYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE 628
           L AC+HSG    GK    ++++   + + +      ++D+  +   +E A +    M+ E
Sbjct: 216 LLACAHSGSQRLGKCIHDQVIKMGLESNVFVG--TSIIDMYCKCGKVEMARKAFDRMR-E 272

Query: 629 PTAEVWCALLGACRVHSN-KELGEIVAKKLLELD-PGNPGNYVLISNVFAA 677
              + W A++    +H + KE  E+      E++  G   NY+   +V AA
Sbjct: 273 KNVKSWSAMVAGYGMHGHAKEALEV----FYEMNMAGVKPNYITFVSVLAA 319



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  A + FD++ ++ V +W+AM+  Y  +G     LE +  M + G+  +  T
Sbjct: 253 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYIT 312

Query: 61  FPCVIKACAMLKDLDCG-----AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           F  V+ AC+    L+ G     A  H   ++ G +    +V+ L     +    ++A  L
Sbjct: 313 FVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLL----GRAGYLKEAFDL 368

Query: 116 FDRMGEKEDVVLWNSIISA 134
              M  + D V+W +++ A
Sbjct: 369 IKGMKLRPDFVVWGALLGA 387


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/739 (31%), Positives = 391/739 (52%), Gaps = 92/739 (12%)

Query: 102 MYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAY 161
           M+ +     +ARQ+FD + ++ D   W  ++S Y+ SG    A G+F  M R  L   ++
Sbjct: 1   MFGRLGCVERARQIFDAIADR-DSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSL--GSW 57

Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
           T                                     AL++ +A  G   EA  +   +
Sbjct: 58  T-------------------------------------ALLSAFALSGHHEEAKTLFDTM 80

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
           + +D ++W  MLT          A   F ++     + D V     ++A+   G + N +
Sbjct: 81  QERDLIAWTIMLTVLATFSNIEDAKYHFDQMP----ERDLVAWTAMLAANAERGQMENAR 136

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           E      ++   S      +L+  Y +   V   GRVF  M   + ++WT ++ GY+   
Sbjct: 137 ETFDQMPERNLFS----WTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYS--- 189

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA 401
                                 + G V+ A      M +              DL+   A
Sbjct: 190 ----------------------LSGDVVRAKRAFDSMPE-------------RDLIAWTA 214

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE-----A 456
           ++  Y   G++ Y+R +F+ +  +D++SW +M+++ V N L  E+ ELF  M        
Sbjct: 215 MLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSK 274

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            +  + +T ++ L A S L  L +G++++  +  +GF+ +  V+++LV+ Y RCGAL  A
Sbjct: 275 GMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDA 334

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             VF+ ++ +D+I W+SMI+A    GR   A++L+++M +E   PD I F+++L+ACS+S
Sbjct: 335 KIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNS 394

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           G++     F   +  D Q++P  EHYAC+VD+LGRA  L +A   +R M   P   ++  
Sbjct: 395 GVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMT 454

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           +L AC+++++ E GE  A+ + ELDP N   Y+ ++N+++A+++ KD  ++R  M   G+
Sbjct: 455 MLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGI 514

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           KK PG SWIE+ +++H FIA DK H + DEIY ++  +  ++ +E GY   T+ VL +VE
Sbjct: 515 KKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQM-KEAGYFQDTKVVLQDVE 573

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           E+EK  +L+ HSE+LAIA+G++ +  G+ +RI KNLRVC DCH+  K++S++ GRE++VR
Sbjct: 574 EDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVR 633

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D NRFHHF+ G+CSC DYW
Sbjct: 634 DTNRFHHFQNGMCSCNDYW 652



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 224/513 (43%), Gaps = 58/513 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS----- 55
           M+G+ G V  A Q+FD ++ R  F+W  ML  Y  +G+       + RM    +      
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTAL 60

Query: 56  VDAFTFPC----------------VIKACAMLKDLDCGAKIHGLVLKCGYDST---DFIV 96
           + AF                    +I    ML  L   + I     K  +D     D + 
Sbjct: 61  LSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIED--AKYHFDQMPERDLVA 118

Query: 97  -NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
             +++A  A+      AR+ FD+M E+ ++  W S++SAY  SG    A  +F  M    
Sbjct: 119 WTAMLAANAERGQMENARETFDQMPER-NLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWN 177

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEA 214
           LV  A+T +        + +   G  + A         +  +A  A+++ YA  G +   
Sbjct: 178 LV--AWTAML-------TGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYT 228

Query: 215 AGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ-----GAGQKPDQVCTVNAVS 269
             +  ++  +D +SW +M+   V+NDL  ++ + F  +        G  P++V  +  + 
Sbjct: 229 REIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLD 288

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A   LG L  G+++HA   ++GF +DL + N L++ Y +C  +     VF  M  +D IS
Sbjct: 289 ACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVIS 348

Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
           W+++I+ +AQ     +A+EL+  +  EG   D +I  SVL ACS     S   E  G   
Sbjct: 349 WSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSN----SGVVEASGDFF 404

Query: 390 RKGLSDLVILNAI------VDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS---YVH 439
           R  + D  +   +      VDV G+ G +  + ++   +      + + +M+S+   Y  
Sbjct: 405 RSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTD 464

Query: 440 NGLANEALELFYLMNEANVESDSITLVSALSAA 472
                 A E+ + ++  N  S  ITL +  SAA
Sbjct: 465 VERGEAAAEVVFELDPEN-SSPYITLANIYSAA 496


>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
          Length = 818

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 248/779 (31%), Positives = 401/779 (51%), Gaps = 51/779 (6%)

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK--EDVVLWNSIISA 134
             ++H L ++ G      +  +LV + A+        +L     E   +D VLWN  ++ 
Sbjct: 71  APQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAM 130

Query: 135 YSASGQCLEALGLFREMQ------RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
            + + +  EA+ +FREMQ      R G   +AY    AL A         GM    A V 
Sbjct: 131 LAEAEEWDEAIAVFREMQARGVPRRRGRAVHAYALKLALDAHPLVPGFLAGMYAENADVA 190

Query: 189 SGQNL-------QVYVANALIAMYARCGKMTEAAGVLYQL----ENKDSVSWNSMLTGFV 237
           +   +        V   NA++A  AR G + +A  +  ++       +  +WN++L+G  
Sbjct: 191 AATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCS 250

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           ++    +A+     +   G +PD     + + +    G L +G E+H + ++     D+ 
Sbjct: 251 RHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVY 310

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
            G  L+DMYAKC  ++   +VF  +  ++  +W +++AGYA       ALEL   ++   
Sbjct: 311 TGTALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNR 370

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
           LD D+     +               I GY +    S  V+L   +   G   N      
Sbjct: 371 LDPDITTWNGL---------------ITGYSMNGQSSQAVLLLRQIKAAGVTPN------ 409

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
                    VVSWTS+IS   HNG   ++    + M +  V+   +T+   L A + L++
Sbjct: 410 ---------VVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLAL 460

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
            KKGKEL+ F +R+ ++ +  V+++L+DMY++ G+L  A  +F  +Q K+L+L  +M+  
Sbjct: 461 QKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTG 520

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
             +HG+G+ AI+LF+ M      PD ITF ALL AC   GL+ EG ++ + M   Y + P
Sbjct: 521 LAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKP 580

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             E+YAC+VDLL R  +L+EA  F+    I+P A  W ALL  C +H N  L E+ A+ L
Sbjct: 581 TTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNL 640

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
             L+P N  NY+L+ N++   R + + E ++  M+  G+   PG SWI+I   IH F   
Sbjct: 641 FRLEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVD 700

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
            K H E+ EIY++L  +  ++ ++ GYV  T  + +NV+EEEK ++L GH+E+LAI YG+
Sbjct: 701 GKPHPETAEIYEELIRLVFQI-KKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGL 759

Query: 778 LKSTEG-SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++S    + +R+ KN R+C DCH   K +S L  R++++RDA RFHHF  G CSC DYW
Sbjct: 760 IRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 818



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 186/447 (41%), Gaps = 88/447 (19%)

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN---KDSVSWNSMLT 234
           L  ++H+  V++G +    V  AL+ + AR G+    A +L++      KD+V WN  + 
Sbjct: 70  LAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVA 129

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
              + + + +A+  FRE+Q  G    +                  G+ +HAYA+K    +
Sbjct: 130 MLAEAEEWDEAIAVFREMQARGVPRRR------------------GRAVHAYALKLALDA 171

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
              +   L  MYA+   V    RV   M A   + W  ++A  A+      ALEL   + 
Sbjct: 172 HPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMS 231

Query: 355 LEGLDADVMIIGSVLMACS------------------GLKCMSQT--------------- 381
             G + +V    +VL  CS                  GL+  + T               
Sbjct: 232 RSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLR 291

Query: 382 --KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
              EIH + +R  L  D+    A+VD+Y KCG +D ++ VF+++E +++ +W S+++ Y 
Sbjct: 292 HGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYA 351

Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
           + G  + ALEL  LM +  ++ D  T                    NG I     N + S
Sbjct: 352 NAGRFDIALELVELMKKNRLDPDITT-------------------WNGLITGYSMNGQSS 392

Query: 499 VASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
            A  L+      G             T +++ WTS+I+ +  +G  + +    ++M+ + 
Sbjct: 393 QAVLLLRQIKAAGV------------TPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDG 440

Query: 559 FAPDHITFLALLYACSHSGLINEGKKF 585
             P  +T   LL AC+   L  +GK+ 
Sbjct: 441 VQPSLVTMSVLLRACAGLALQKKGKEL 467



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/486 (22%), Positives = 202/486 (41%), Gaps = 79/486 (16%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAM---------------LGAYVSNGEPLRVLET 45
           MY +   V  A ++ D +   +V  WNA+               L A +S   P   + T
Sbjct: 182 MYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVAT 241

Query: 46  Y--------------------SRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
           +                    + M   G+  DA T   ++K+ A    L  G +IH   L
Sbjct: 242 WNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFL 301

Query: 86  KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEAL 145
           +   +   +   +LV MYAKC     A+++FD + E  ++  WNS+++ Y+ +G+   AL
Sbjct: 302 RNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDAL-EHRNLTTWNSLVAGYANAGRFDIAL 360

Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMY 205
            L   M++  L  +  T+                                   N LI  Y
Sbjct: 361 ELVELMKKNRLDPDITTW-----------------------------------NGLITGY 385

Query: 206 ARCGKMTEAAGVLYQLE----NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQ 261
           +  G+ ++A  +L Q++      + VSW S+++G   N  Y  +  F  E+Q  G +P  
Sbjct: 386 SMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSL 445

Query: 262 VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ 321
           V     + A   L     GKELH +A+++ +  D+ +   L+DMY+K   +     +F  
Sbjct: 446 VTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFES 505

Query: 322 MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQT 381
           +  ++ +    ++ G A +    +A+ELF  +   GL  D +   ++L AC  +  +++ 
Sbjct: 506 IQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEG 565

Query: 382 KE-IHGYIIRKGLSDLVILNA-IVDVYGKCGNIDYSRNVFE-SIESKDVVSWTSMISS-Y 437
            E   G   + G+       A +VD+  +CG +D + +  E S        W ++++   
Sbjct: 566 WEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCS 625

Query: 438 VHNGLA 443
           +H  LA
Sbjct: 626 IHGNLA 631



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 5/154 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K GS++ A+ +F+ + Q+ +   NAML     +G+    +E +  M   G+  D+ T
Sbjct: 489 MYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSIT 548

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC  +  +  G +   G+  K G   T      +V + A+C    +A    +R 
Sbjct: 549 FTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERS 608

Query: 120 GEKEDVVLWNSIISAYSASGQC----LEALGLFR 149
                   W ++++  S  G      + A  LFR
Sbjct: 609 PIDPGASHWGALLTGCSIHGNLALAEVAARNLFR 642


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/701 (34%), Positives = 396/701 (56%), Gaps = 11/701 (1%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N++++M  +  +   A ++F +M E+ DV  WN ++  Y   G   EAL L+  M   G+
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPER-DVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + YTF   L+ C       +G E+HA  ++ G   +V V NAL+ MYA+CG +  A  
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARK 253

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V   +   D +SWN+M+ G  +N      ++ F  +     +P+ +   +   ASG L  
Sbjct: 254 VFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSE 313

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           +   KE+H +A+K+GF  D+   N+L+ MY     +   G++F +M  +D +SWT +I+G
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSD 395
           Y +N    KALE++  ++L  +  D + I S L AC+ L  +    ++H     KG +  
Sbjct: 374 YEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           +V+ NA++++Y K  +ID +  VF+ +  KDVVSW+SMI+ +  N  + EAL  F  M  
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-L 492

Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
            +V+ +S+T ++ALSA ++   L+ GKE++ +++R G   EG V ++L+D+Y +CG    
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552

Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
           A   F+    KD++ W  M++    HG G +A+ LF +M      PD +TF+ALL ACS 
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612

Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
           +G++ +G +   +M   + + P  +HYAC+VDLL R   L EAY  +  M I+P A VW 
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672

Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
           ALL  CR+H + ELGE+ AK +LEL+P +   +VL+ +++  + KW  V +VR  MR  G
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732

Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
           L++  G SW+E+    H+F+  D+SH +  EI   L  I E++ +  G+          V
Sbjct: 733 LEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERM-KACGFAPVESLEDKEV 791

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEG----SLIRITKNL 792
            E++   +L GHSERLA+A+G++ +T G    S   +TKN+
Sbjct: 792 SEDD---ILCGHSERLAVAFGLINTTPGLCKYSAWYMTKNV 829



 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 184/577 (31%), Positives = 305/577 (52%), Gaps = 15/577 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           M  + G +  A ++F K+ +R VF+WN M+G Y   G     L+ Y RM   G+  D +T
Sbjct: 140 MLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYT 199

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           FPCV++ C  + D   G ++H  VL+ G+     ++N+LV MYAKC D   AR++FD M 
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D + WN++I+ +  + +C   L LF  M    +  N  T  +   A    S      
Sbjct: 260 -VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAK 318

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           E+H   VK G  + V   N+LI MY   G+M +A  +  ++E KD++SW +M++G+ +N 
Sbjct: 319 EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              KA++ +  ++     PD V   +A++A   LG L  G +LH  A  +GF+  + + N
Sbjct: 379 FPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++MYAK   ++    VF  M  +D +SW+++IAG+  N+   +AL  FR + L  +  
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKP 497

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           + +   + L AC+    +   KEIH Y++R G+ S+  + NA++D+Y KCG   Y+   F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
                KDVVSW  M+S +V +GL + AL LF  M E     D +T V+ L A S   ++ 
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVI 617

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           +G EL   +  K F++  ++   + +VD+ +R G L  A  + N +  K D  +W +++N
Sbjct: 618 QGWELFHMMTEK-FSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLN 676

Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALL 570
              +H     G++A  +  ++E     P+ + +  LL
Sbjct: 677 GCRIHRHVELGELAAKVILELE-----PNDVAYHVLL 708



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 242/465 (52%), Gaps = 6/465 (1%)

Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
           ++ + A  + GQ  +AL L           +   +VA  + CE       GM   A    
Sbjct: 68  SAALRALCSHGQLAQALWLLESSPEP---PDEGAYVALFRLCEWRRAVDAGMRACARADA 124

Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
              +  + + NA+++M  R G++  A  V  ++  +D  SWN M+ G+ +     +A+  
Sbjct: 125 EHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDL 184

Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
           +  +  AG +PD       +   G + +   G+E+HA+ ++ GF  ++ + N L+ MYAK
Sbjct: 185 YYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAK 244

Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
           C  +    +VF  M   D ISW  +IAG+ +N+     LELF T+    +  ++M I SV
Sbjct: 245 CGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSV 304

Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
            +A   L  +   KE+HG+ +++G + D+   N+++ +Y   G +  +  +F  +E+KD 
Sbjct: 305 TVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDA 364

Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           +SWT+MIS Y  NG  ++ALE++ LM   NV  D +T+ SAL+A + L  L  G +L+  
Sbjct: 365 MSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHEL 424

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVA 547
              KGF     VA++L++MYA+   +D A +VF  +  KD++ W+SMI     + R   A
Sbjct: 425 AQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEA 484

Query: 548 IDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRC 591
           +  F  M      P+ +TF+A L AC+ +G +  GK+    ++RC
Sbjct: 485 LYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 528


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/695 (32%), Positives = 387/695 (55%), Gaps = 4/695 (0%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T+  ++ ACA  + LD   KIH  VLK  Y  +  + N ++ MY KC   + AR++FD M
Sbjct: 161 TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTM 220

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
            +  +VV W S+IS YS +GQ  +A+ ++ +M R G   +  TF + ++AC  +    LG
Sbjct: 221 -QLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLG 279

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++HA  +KS     +   NALI+MY   G++  A+ V  ++  KD +SW +M+TG++Q 
Sbjct: 280 RQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQL 339

Query: 240 DLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
               +A+  FR+L   G  +P++    +  SA   L  L  GK++H   +K G   ++  
Sbjct: 340 GYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFA 399

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           G +L DMYAK   +      F Q+   D +SW  IIA +A N    +A++ FR +   GL
Sbjct: 400 GCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGL 459

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D +   S+L  C     ++Q ++IH YI++ G   ++ + N+++ +Y KC ++  + N
Sbjct: 460 TPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALN 519

Query: 418 VFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           VF  I  + ++VSW +++S+ +      E   L+  M+ +  + DSIT+ + L   + L+
Sbjct: 520 VFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELT 579

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
            L  G +++ + I+ G  L+ SV + L+DMYA+CG+L  A  VF+  Q  D++ W+S+I 
Sbjct: 580 SLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIV 639

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
                G G  A++LF  M      P+ +T+L  L ACSH GL+ EG +  + M  ++ + 
Sbjct: 640 GYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIP 699

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EH++C+VDLL RA  L EA  F++   ++     W  LL AC+ H+N ++ E  A  
Sbjct: 700 PTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGN 759

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           +L+LDP N    V++ N+ A++  W++V ++R  M+  G++K PG SWIE+ +K H F +
Sbjct: 760 ILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFS 819

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
            D SH + + IY  L E+  ++  +G    Q+ ++
Sbjct: 820 EDSSHPQRNLIYTMLEELWSQVLDDGYDPCQSCYI 854



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 168/552 (30%), Positives = 282/552 (51%), Gaps = 6/552 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ DA ++FD +    V +W +M+  Y  NG+    +  Y +M   G   D  T
Sbjct: 203 MYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLT 262

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  VIKAC +  D+D G ++H  V+K  +       N+L++MY        A  +F R+ 
Sbjct: 263 FGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIP 322

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
            K D++ W ++I+ Y   G  +EAL LFR++ R G    N + F +   AC        G
Sbjct: 323 TK-DLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYG 381

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            ++H   VK G    V+   +L  MYA+ G +  A     Q++N D VSWN+++  F  N
Sbjct: 382 KQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADN 441

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+ FFR++   G  PD +  ++ +   G    L  G+++H+Y +K GF  ++ + 
Sbjct: 442 GDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVC 501

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           N+L+ MY KC  ++    VF  ++   + +SW  I++   Q     +   L++ +   G 
Sbjct: 502 NSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGN 561

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D + I ++L  C+ L  +    ++H Y I+ GL  D+ + N ++D+Y KCG++ ++R+
Sbjct: 562 KPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARD 621

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+S ++ D+VSW+S+I  Y   GL +EAL LF +M    V+ + +T + ALSA S + +
Sbjct: 622 VFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGL 681

Query: 478 LKKGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN-CVQTKDLILWTSMI 535
           +++G  L        G        S +VD+ AR G L  A           D+  W +++
Sbjct: 682 VEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLL 741

Query: 536 NANGLHGRGKVA 547
            A   H    +A
Sbjct: 742 AACKTHNNVDIA 753



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 79/142 (55%), Gaps = 1/142 (0%)

Query: 445 EALELF-YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
           EALE F + +  +N   +  T  S + A ++   L   K+++  +++  +     + + +
Sbjct: 141 EALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHM 200

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           ++MY +CG++  A KVF+ +Q  +++ WTSMI+    +G+   AI ++ +M      PD 
Sbjct: 201 INMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQ 260

Query: 564 ITFLALLYACSHSGLINEGKKF 585
           +TF +++ AC  +G I+ G++ 
Sbjct: 261 LTFGSVIKACYIAGDIDLGRQL 282


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/726 (33%), Positives = 386/726 (53%), Gaps = 72/726 (9%)

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
           AY  +     A  L++ M    L  + YT+   +QAC     E    ++H   +K G + 
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246

Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
            VYV N LI  ++ C  MT+A  V  +    DSVSWNS+L G+++               
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIE--------------- 291

Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
                               +GN+   K ++    ++  ++     N+++ ++     V 
Sbjct: 292 --------------------IGNVEEAKHIYHQMPERSIIA----SNSMIVLFGMRGLVV 327

Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
              ++F +M  +D ++W+ +IA + QN  + +A+  F  +   G+  D ++  S L AC+
Sbjct: 328 EACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACA 387

Query: 374 GLKCMSQTKEIHGYIIRKG--------------------------------LSDLVILNA 401
            L  ++  K IH   ++ G                                L DL+  N+
Sbjct: 388 NLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNS 447

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           ++  Y KC  +D ++ +F+S+  KDVVSW+SMIS Y  N L +E L LF  M  +  + D
Sbjct: 448 MISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPD 507

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
             TLVS +SA + L+ L++GK ++ +I R G  +   + ++L+DMY +CG ++ A +VF 
Sbjct: 508 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 567

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  K +  W ++I    ++G  + ++D+F  M+     P+ ITF+ +L AC H GL++E
Sbjct: 568 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 627

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G+     M  D+++ P  +HY C+VDLLGRA  L+EA + +  M + P    W ALLGAC
Sbjct: 628 GQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 687

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
           + H + E+G  V +KL+EL P + G +VL+SN++A+  KW DV ++R  M    + K PG
Sbjct: 688 KKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPG 747

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
            S IE    IH F+A DK+H + D I   L E+  KL+ E GY      VL +V+EEEK 
Sbjct: 748 CSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLE-GYTPDINEVLLDVDEEEKE 806

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             L+ HSE+LAIA+G++  +  + IRI KNLR+C DCH+  KL+S+ F R++VVRD +RF
Sbjct: 807 STLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRF 866

Query: 822 HHFEAG 827
           HHFE G
Sbjct: 867 HHFEQG 872



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/574 (25%), Positives = 266/574 (46%), Gaps = 78/574 (13%)

Query: 32  AYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDS 91
           AY+    P      Y  M    +  D +T+P +I+AC++ +      ++H  VLK G+DS
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246

Query: 92  TDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
             ++ N+L+  ++ C +   A ++F+      D V WNSI++ Y   G   EA  ++ +M
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNE-SSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305

Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
               ++                                        +N++I ++   G +
Sbjct: 306 PERSIIA---------------------------------------SNSMIVLFGMRGLV 326

Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
            EA  +  ++  KD V+W++++  F QN++Y +A++ F  +   G   D+V  V+A+SA 
Sbjct: 327 VEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSAC 386

Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
             L  +  GK +H+ ++K G  S + + N L+ MY+KC  +    ++F +    D ISW 
Sbjct: 387 ANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWN 446

Query: 332 T-------------------------------IIAGYAQNNCHLKALELFRTVQLEGLDA 360
           +                               +I+GYAQN+   + L LF+ +Q+ G   
Sbjct: 447 SMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKP 506

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVF 419
           D   + SV+ AC+ L  + Q K +H YI R GL+  VIL   ++D+Y KCG ++ +  VF
Sbjct: 507 DETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 566

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  K + +W ++I     NGL   +L++F  M + +V  + IT +  L A   + ++ 
Sbjct: 567 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVD 626

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
           +G+  + + +     ++ +V     +VD+  R G L  A ++ N +  T D+  W +++ 
Sbjct: 627 EGQH-HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLG 685

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           A   HG  ++   +  K+      PDH  F  LL
Sbjct: 686 ACKKHGDSEMGRRVGRKL--IELQPDHDGFHVLL 717



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 212/477 (44%), Gaps = 80/477 (16%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           +  C ++ DA ++F++ S     +WN++L  Y+  G        Y +M    I       
Sbjct: 258 FSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIAS---- 313

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
                                              NS++ ++       +A +LFD M E
Sbjct: 314 -----------------------------------NSMIVLFGMRGLVVEACKLFDEMLE 338

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D+V W+++I+ +  +    EA+  F  M ++G++ +    V+AL AC +     +G  
Sbjct: 339 K-DMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKL 397

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMT----------------------------- 212
           IH+ ++K G    + + NALI MY++CG +                              
Sbjct: 398 IHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNL 457

Query: 213 --EAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
              A  +   +  KD VSW+SM++G+ QNDL+ + +  F+E+Q +G KPD+   V+ +SA
Sbjct: 458 VDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISA 517

Query: 271 SGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISW 330
             RL  L  GK +HAY  + G   ++ +G TL+DMY KC CV     VFY M  +   +W
Sbjct: 518 CARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTW 577

Query: 331 TTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKE-----IH 385
             +I G A N     +L++F  ++   +  + +    VL AC  +  + + +      IH
Sbjct: 578 NALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIH 637

Query: 386 GYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNG 441
            + I+  +        +VD+ G+ G +  +  +   +  + DV +W +++ +   +G
Sbjct: 638 DHKIQPNVKH---YGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHG 691



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 170/360 (47%), Gaps = 40/360 (11%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           ++G  G V++A +LFD++ ++ + TW+A++  +  N      + T+  M  +G+ VD   
Sbjct: 319 LFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVV 378

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR-- 118
               + ACA L  ++ G  IH L LK G +S   + N+L+ MY+KC D   AR+LFD   
Sbjct: 379 AVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAY 438

Query: 119 -----------------------------MGEKEDVVLWNSIISAYSASGQCLEALGLFR 149
                                        M EK DVV W+S+IS Y+ +    E L LF+
Sbjct: 439 LLDLISWNSMISGYLKCNLVDNAKAIFDSMPEK-DVVSWSSMISGYAQNDLFDETLALFQ 497

Query: 150 EMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCG 209
           EMQ  G   +  T V+ + AC   +    G  +HA   ++G  + V +   LI MY +CG
Sbjct: 498 EMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCG 557

Query: 210 KMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
            +  A  V Y +  K   +WN+++ G   N L   ++  F  ++     P+++  +  + 
Sbjct: 558 CVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLG 617

Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           A   +G L++  + H Y++    + D +I   +   Y   C V+ +GR      A++ ++
Sbjct: 618 ACRHMG-LVDEGQHHFYSM----IHDHKIQPNV-KHYG--CMVDLLGRAGKLQEAEELLN 669


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/710 (31%), Positives = 382/710 (53%), Gaps = 8/710 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS------ 55
           Y K G + DA +LFD +  R + +W + +  Y  +G     L  ++     G +      
Sbjct: 75  YSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEP 134

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            + F     ++ACA  +    G ++HG+  K G D+  F+  +LV +YAK      A  +
Sbjct: 135 PNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSV 194

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD +  +  V  W ++I+ YS +GQ   AL LF  M   G+  + +   +A  AC    F
Sbjct: 195 FDALPARNPVT-WTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGF 253

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G +IH    ++       V NALI +Y +C ++  A  +   +EN++ VSW +M+ G
Sbjct: 254 VEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAG 313

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           ++QN L  +AM  F +L  AG +PD     + +++ G L  +  G+++HA+ IK    SD
Sbjct: 314 YMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESD 373

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             + N L+DMYAKC  +     VF  +   D IS+  +I GYA+      A+E+F  ++ 
Sbjct: 374 EYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRY 433

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
             L   ++   S+L   S    +  +K+IHG I++ G S DL   +A++DVY K   +D 
Sbjct: 434 CSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDD 493

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           ++ VF  ++++D+V W +MI     N    EA++LF  +  + +  +  T V+ ++ AS+
Sbjct: 494 AKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVAST 553

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L+ +  G++ +  II+ G + +  ++++L+DMYA+CG ++    +F     KD+I W SM
Sbjct: 554 LASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSM 613

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           I+    HG  + A+ +F  ME     P+++TF+++L AC+H+GL++EG      M+  Y 
Sbjct: 614 ISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYA 673

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           ++P  EHYA +V+L GR+  L  A +F+  M IEP A +W +LL AC +  N E+G    
Sbjct: 674 VEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYAT 733

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSW 704
           +  L  DP + G  VL+SN++A+   W D +++R  M  +G+ K PG SW
Sbjct: 734 EMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYSW 783



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 166/533 (31%), Positives = 288/533 (54%), Gaps = 13/533 (2%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F+ N L+  Y+K      AR+LFD M  + ++V W S IS Y+  G+  +AL LF     
Sbjct: 66  FLANLLLRGYSKLGRLGDARRLFDSMPSR-NLVSWGSAISMYAQHGREDDALLLFAAFPS 124

Query: 154 VGLVT------NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
            G  +      N +   +AL+AC  S     G ++H    K G +  V+V  AL+ +YA+
Sbjct: 125 AGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAK 184

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
            G++  A  V   L  ++ V+W +++TG+ Q      A++ F  +   G +PD+    +A
Sbjct: 185 AGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASA 244

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
            SA   LG +  G+++H YA +    SD  + N L+D+Y KC  +    R+F  M  ++ 
Sbjct: 245 ASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNL 304

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SWTT+IAGY QN+   +A+ +F  +   G   DV    S+L +C  L  + Q +++H +
Sbjct: 305 VSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAH 364

Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
           +I+  L SD  + NA++D+Y KC ++  +R VFE++   D +S+ +MI  Y   G    A
Sbjct: 365 VIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGA 424

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           +E+F  M   +++   +T VS L  +SS S L+  K+++G I++ G +L+    S+L+D+
Sbjct: 425 VEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDV 484

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           Y++   +D A  VF+ +Q +D+++W +MI     + RG+ A+ LF ++      P+  TF
Sbjct: 485 YSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTF 544

Query: 567 LALLYACSHSGLINEGKKF-LEIMRCDYQLDPWPEHYA-CLVDLLGRANHLEE 617
           +AL+   S    I  G++F  +I++     DP   H +  L+D+  +   +EE
Sbjct: 545 VALVTVASTLASIFHGQQFHAQIIKAGADSDP---HISNALIDMYAKCGFIEE 594



 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 177/597 (29%), Positives = 301/597 (50%), Gaps = 11/597 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y K G +  A  +FD +  R   TW A++  Y   G+    LE + RM + G+  D F 
Sbjct: 181 LYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFV 240

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
                 AC+ L  ++ G +IHG   +   +S   +VN+L+ +Y KC     AR+LFD M 
Sbjct: 241 LASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSM- 299

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  ++V W ++I+ Y  +    EA+ +F ++ + G   + +   + L +C   +    G 
Sbjct: 300 ENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGR 359

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +K+      YV NALI MYA+C  +TEA  V   L   D++S+N+M+ G+ +  
Sbjct: 360 QVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLG 419

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
               A++ F +++    KP  +  V+ +  S    +L   K++H   +K G   DL  G+
Sbjct: 420 DLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGS 479

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+D+Y+K   V+    VF  M  +D + W  +I G AQN    +A++LF  +++ GL  
Sbjct: 480 ALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTP 539

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           +     +++   S L  +   ++ H  II+ G  SD  I NA++D+Y KCG I+  R +F
Sbjct: 540 NEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLF 599

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
           ES   KDV+ W SMIS+Y  +G A EAL +F +M  A VE + +T VS LSA +   ++ 
Sbjct: 600 ESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVD 659

Query: 480 KG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL-ILWTSMINA 537
           +G    N    +          +S+V+++ R G L  A +    +  + +  +W S+++A
Sbjct: 660 EGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSA 719

Query: 538 NGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
             L G    G+ A ++    +     P     ++ +YA    GL  + +K  + M C
Sbjct: 720 CHLFGNVEIGRYATEMALLADPADSGPS--VLMSNIYAS--KGLWADAQKLRQGMDC 772



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 263/510 (51%), Gaps = 25/510 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  +L A +LFD +  R + +W  M+  Y+ N      +  + ++   G   D F 
Sbjct: 282 LYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFA 341

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ +C  L  +  G ++H  V+K   +S +++ N+L+ MYAKC    +AR +F+ + 
Sbjct: 342 CTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALA 401

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E +D + +N++I  Y+  G    A+ +F +M+   L  +  TFV+ L      S   L  
Sbjct: 402 E-DDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSK 460

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH   VKSG +L +Y  +ALI +Y++   + +A  V   ++N+D V WN+M+ G  QN+
Sbjct: 461 QIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNE 520

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ F  L+ +G  P++   V  V+ +  L ++ +G++ HA  IK G  SD  I N
Sbjct: 521 RGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISN 580

Query: 301 TLMDMYAKCCCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
            L+DMYAKC  +   GR+ ++ T  +D I W ++I+ YAQ+    +AL +F  ++  G++
Sbjct: 581 ALIDMYAKCGFIEE-GRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVE 639

Query: 360 ADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
            + +   SVL AC+       GL   +  K    Y +  G        ++V+++G+ G +
Sbjct: 640 PNYVTFVSVLSACAHAGLVDEGLHHFNSMKT--KYAVEPGTEHYA---SVVNLFGRSGKL 694

Query: 413 DYSRNVFESIESKDVVS-WTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSA 468
             ++   E +  + V + W S++S+   + +  +   A E+  L + A  +S    L+S 
Sbjct: 695 HAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPA--DSGPSVLMSN 752

Query: 469 LSAASSL----SILKKGKELNGFIIRKGFN 494
           + A+  L      L++G +  G +   G++
Sbjct: 753 IYASKGLWADAQKLRQGMDCAGVVKEPGYS 782



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 267/505 (52%), Gaps = 14/505 (2%)

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA  V SG    +++AN L+  Y++ G++ +A  +   + +++ VSW S ++ + Q+   
Sbjct: 53  HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112

Query: 243 CKAMQFFRELQGA------GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             A+  F     A      G+ P++    +A+ A  +      G+++H  A K G  +++
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANV 172

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +G  L+++YAK   ++    VF  + A++ ++WT +I GY+Q      ALELF  + L+
Sbjct: 173 FVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLD 232

Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYS 415
           G+  D  ++ S   ACSGL  +   ++IHGY  R    SD  ++NA++D+Y KC  +  +
Sbjct: 233 GVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLA 292

Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           R +F+S+E++++VSWT+MI+ Y+ N L  EA+ +F+ +++A  + D     S L++  SL
Sbjct: 293 RRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSL 352

Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
           + + +G++++  +I+     +  V ++L+DMYA+C  L  A  VF  +   D I + +MI
Sbjct: 353 AAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMI 412

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQ 594
                 G    A+++F KM   S  P  +TF++LL   S    +   K+    I++    
Sbjct: 413 EGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTS 472

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL-GACRVHSNKELGEIV 653
           LD +    + L+D+  + + +++A + V S+       +W A++ G  +    +E  ++ 
Sbjct: 473 LDLYAG--SALIDVYSKFSLVDDA-KLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLF 529

Query: 654 AKKLLELDPGNPGNYVLISNVFAAS 678
           A+  L +    P  +  ++ V  AS
Sbjct: 530 AR--LRVSGLTPNEFTFVALVTVAS 552



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 116/228 (50%), Gaps = 8/228 (3%)

Query: 365 IGSVLMAC-SGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
           +  +L++C +G +        H   +  GL  DL + N ++  Y K G +  +R +F+S+
Sbjct: 32  LAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSM 91

Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES------DSITLVSALSAASSLS 476
            S+++VSW S IS Y  +G  ++AL LF     A   S      +   L SAL A +   
Sbjct: 92  PSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSR 151

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
             + G++++G   + G +    V ++LV++YA+ G +D A  VF+ +  ++ + WT++I 
Sbjct: 152 AARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVIT 211

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
                G+  VA++LF +M  +   PD     +   ACS  G +  G++
Sbjct: 212 GYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQ 259


>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
 gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/682 (34%), Positives = 392/682 (57%), Gaps = 8/682 (1%)

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
           +T  + F   L+ C D    +    I A  +KSG   ++   + L+    +CG +  A  
Sbjct: 62  LTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQ 120

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           V   +  +  V+WNS++   +++    +A++ +R +      PD+    +   A   L  
Sbjct: 121 VFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSL 180

Query: 277 LLNGKELHAYAIKQGF-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
               +  H  A+  G  VS++ +G+ L+DMY K         V  ++  +D +  T +I 
Sbjct: 181 EKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIV 240

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-S 394
           GY+Q     +A++ F+++ +E +  +     SVL++C  LK +   K IHG +++ G  S
Sbjct: 241 GYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFES 300

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
            L    +++ +Y +C  +D S  VF+ IE  + VSWTS+IS  V NG    AL  F  M 
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMM 360

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
             +++ +S TL SAL   S+L++ ++G++++G + + GF+ +    S L+D+Y +CG  D
Sbjct: 361 RDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
           +A  VF+ +   D+I   +MI +   +G G+ A+DLF +M      P+ +T L++L AC+
Sbjct: 421 MARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           +S L+ EG +  +  R D ++    +HYAC+VDLLGRA  LEEA + + +  I P   +W
Sbjct: 481 NSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLW 538

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
             LL AC+VH   E+ E + +K+LE++PG+ G  +L+SN++A++ KW  V +++ +M+  
Sbjct: 539 RTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDM 598

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDK-SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
            LKK P  SW+EI  + H+F+A D  SH  S++I + L E+ +K  ++ GYV     V  
Sbjct: 599 KLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKK-SKDLGYVEDKSCVFQ 657

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           ++EE  K + L+ HSE+LAIA+ V ++  GS IRI KNLRVCVDCHS+ K+VSR+  RE+
Sbjct: 658 DMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKREI 716

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
           + RD+ RFHHF  G CSCGDYW
Sbjct: 717 ICRDSKRFHHFRDGSCSCGDYW 738



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 273/535 (51%), Gaps = 9/535 (1%)

Query: 47  SRMRVLGISVDAFT----FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAM 102
           ++ R+L I+ D  T    F  +++ C   + +     I   +LK G+ + +   + LV  
Sbjct: 50  NQFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPA-EISGSKLVDA 108

Query: 103 YAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYT 162
             KC D   ARQ+FD M E+  +V WNS+I+      +  EA+ ++R M    ++ + YT
Sbjct: 109 SLKCGDIDYARQVFDGMSERH-IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYT 167

Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNL-QVYVANALIAMYARCGKMTEAAGVLYQL 221
             +  +A  D S E      H   V  G  +  V+V +AL+ MY + GK  EA  VL ++
Sbjct: 168 LSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV 227

Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
           E KD V   +++ G+ Q     +A++ F+ +     +P++    + + + G L ++ NGK
Sbjct: 228 EEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGK 287

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
            +H   +K GF S L    +L+ MY +C  V+   RVF  +   + +SWT++I+G  QN 
Sbjct: 288 LIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNG 347

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILN 400
               AL  FR +  + +  +   + S L  CS L    + ++IHG + + G   D    +
Sbjct: 348 REEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGS 407

Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
            ++D+YGKCG  D +R VF+++   DV+S  +MI SY  NG   EAL+LF  M    ++ 
Sbjct: 408 GLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQP 467

Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
           + +T++S L A ++  ++++G EL     +    L     + +VD+  R G L+ A  + 
Sbjct: 468 NDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLT 527

Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYK-MEAESFAPDHITFLALLYACS 574
             V   DL+LW ++++A  +H + ++A  +  K +E E      +  ++ LYA +
Sbjct: 528 TEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYAST 582



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 222/439 (50%), Gaps = 11/439 (2%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           KCG +  A Q+FD +S+R + TWN+++   + +      +E Y  M    +  D +T   
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTD-FIVNSLVAMYAKCYDFRKARQLFDRMGEK 122
           V KA + L       + HGL +  G + ++ F+ ++LV MY K    R+A+ + DR+ EK
Sbjct: 171 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230

Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
            DVVL  ++I  YS  G+  EA+  F+ M    +  N YT+ + L +C +      G  I
Sbjct: 231 -DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLI 289

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           H   VKSG    +    +L+ MY RC  + ++  V   +E  + VSW S+++G VQN   
Sbjct: 290 HGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGRE 349

Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
             A+  FR++     KP+     +A+     L     G+++H    K GF  D   G+ L
Sbjct: 350 EMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGL 409

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
           +D+Y KC C +    VF  ++  D IS  T+I  YAQN    +AL+LF  +   GL  + 
Sbjct: 410 IDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPND 469

Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-----AIVDVYGKCGNIDYSRN 417
           + + SVL+AC+  + + +  E+     RK   D ++L       +VD+ G+ G ++ +  
Sbjct: 470 VTVLSVLLACNNSRLVEEGCELFDS-FRK---DKIMLTNDHYACMVDLLGRAGRLEEAEM 525

Query: 418 VFESIESKDVVSWTSMISS 436
           +   + + D+V W +++S+
Sbjct: 526 LTTEVINPDLVLWRTLLSA 544



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 180/385 (46%), Gaps = 22/385 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G   +A+ + D+V ++ V    A++  Y   GE    ++ +  M V  +  + +T
Sbjct: 210 MYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYT 269

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V+ +C  LKD+  G  IHGL++K G++S      SL+ MY +C     + ++F +  
Sbjct: 270 YASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF-KCI 328

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E  + V W S+IS    +G+   AL  FR+M R  +  N++T  +AL+ C + +    G 
Sbjct: 329 EYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGR 388

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IH    K G +   Y  + LI +Y +CG    A  V   L   D +S N+M+  + QN 
Sbjct: 389 QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNG 448

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD-LQIG 299
              +A+  F  +   G +P+ V  ++ + A      +  G EL        F  D + + 
Sbjct: 449 FGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELF-----DSFRKDKIMLT 503

Query: 300 NTLMDMYAKCCCVNYMGR---------VFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           N   D YA  C V+ +GR         +  ++   D + W T+++    +     A  + 
Sbjct: 504 N---DHYA--CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERIT 558

Query: 351 RTV-QLEGLDADVMIIGSVLMACSG 374
           R + ++E  D   +I+ S L A +G
Sbjct: 559 RKILEIEPGDEGTLILMSNLYASTG 583


>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/598 (37%), Positives = 342/598 (57%), Gaps = 10/598 (1%)

Query: 243 CKAMQFFRELQGAGQKP----DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           C+A+   R+L           D+  T N + A   LG+L   + L     K+  +S    
Sbjct: 55  CRAIPLLRQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMS---- 110

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+    K   +     +F +M  ++  +W  ++AG         +L+ F  ++ EG+
Sbjct: 111 WNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGM 170

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D   +GSV   C+GL  +   +++H Y++R G+ SD+ + N++  +Y +CG +     
Sbjct: 171 HPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEA 230

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           V  ++ S  +VS+ + I+    NG +  ALE F +M    V  D +T VSA+S  S L+ 
Sbjct: 231 VLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAA 290

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L +G++++  +I+ G +    V +SLV MY+RCG L  + +V++     DL L ++MI+A
Sbjct: 291 LAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISA 350

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
            G HG+G  A++LF +M      P+ +TFLALLYACSHSGL +EG +F E+M   Y   P
Sbjct: 351 CGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQP 410

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             +HY C+VDLLGR+  L+EA   + SM +     +W  LL AC+   N ++ E +A+++
Sbjct: 411 SVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERV 470

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           +E DP +   YVL+SN+ A S++W DV +VR  MR   ++K PG SW+E   ++H F   
Sbjct: 471 IESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTG 530

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
           DKSH    EI + L E+  K+ R+ GY      V H++E+EEK   L  HSE+LAIA+  
Sbjct: 531 DKSHPRQGEIDEYLKEMMGKI-RQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAF 589

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           L   EG  IR+ KNLRVC DCH   KL+S++ GRE+VVRD +RFHHF  G CSCGDYW
Sbjct: 590 LNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 170/348 (48%), Gaps = 14/348 (4%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N L+    K  D   AR+LFD+M  + +V  WN++++  +  G   ++L  F  M+R G+
Sbjct: 112 NILIGGCIKNGDLGSARELFDKMPTR-NVATWNAMVAGLTNVGLDEDSLQFFLAMRREGM 170

Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
             + +   +  + C        G ++HA  V+SG +  + V N+L  MY RCG + E   
Sbjct: 171 HPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEA 230

Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
           VL  L +   VS+N+ + G  QN     A+++F  ++G    PD V  V+A+S    L  
Sbjct: 231 VLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAA 290

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G+++HA  IK G    + +  +L+ MY++C C+    RV+      D    + +I+ 
Sbjct: 291 LAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISA 350

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYII 389
              +    KA+ELF+ +   G + + +   ++L ACS       GL+      + +G+  
Sbjct: 351 CGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGF-- 408

Query: 390 RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS 436
                 +   N IVD+ G+ G +D +  +  S+  + D V W +++S+
Sbjct: 409 ---QPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSA 453



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 175/373 (46%), Gaps = 4/373 (1%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           K G +  A +LFDK+  R V TWNAM+    + G     L+ +  MR  G+  D F    
Sbjct: 120 KNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGS 179

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           V + CA L D+  G ++H  V++ G DS   + NSL  MY +C    +   +  R     
Sbjct: 180 VFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVL-RALPSL 238

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            +V +N+ I+  + +G    AL  F  M+ V +  +  TFV+A+  C D +    G ++H
Sbjct: 239 TIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVH 298

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           A  +K+G +  V V  +L+ MY+RCG + ++  V       D    ++M++    +    
Sbjct: 299 AQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGH 358

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTL 302
           KA++ F+++   G +P++V  +  + A    G    G E      K  GF   ++  N +
Sbjct: 359 KAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCI 418

Query: 303 MDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALELFRTVQLEGLDA 360
           +D+  +  C++    +   M  + D + W T+++    Q N  +      R ++ +  D+
Sbjct: 419 VDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDS 478

Query: 361 DVMIIGSVLMACS 373
              ++ S + A S
Sbjct: 479 APYVLLSNIRATS 491



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 3/236 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG + + E +   +   T+ ++N  +     NG+    LE +S MR + ++ D  T
Sbjct: 218 MYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVT 277

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   I  C+ L  L  G ++H  V+K G D    ++ SLV MY++C     + +++D   
Sbjct: 278 FVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYC 337

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D+ L +++ISA    GQ  +A+ LF++M   G   N  TF+A L AC  S  +  G+
Sbjct: 338 -GLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGL 396

Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLT 234
           E      K+ G    V   N ++ +  R G + EA  ++  +  + D V W ++L+
Sbjct: 397 EFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLS 452


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 247/745 (33%), Positives = 395/745 (53%), Gaps = 65/745 (8%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N+ +A  A+  +   AR  F+ M  +     +N++++ Y  +     ALGLFR M    L
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRT-TASYNALLAGYFRNRLPDAALGLFRRMPSRDL 79

Query: 157 VT-NAYTFVAAL--QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            + NA     +L  Q   D++     +    + V     L+ YV + L+A         +
Sbjct: 80  ASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLA---------D 130

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASG- 272
           A  +  Q+  ++ VS+  +L G +      +A + F E+      PD+         SG 
Sbjct: 131 AIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM------PDRDVVAWTAMLSGY 184

Query: 273 -RLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
            + G +   + L     K+  VS       ++  YA+   VN   ++F  M  ++ +SWT
Sbjct: 185 CQAGRITEARALFDEMPKRNVVS----WTAMISGYAQNGEVNLARKLFEVMPERNEVSWT 240

Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
            ++ GY Q      A ELF  +    +            AC                   
Sbjct: 241 AMLVGYIQAGHVEDAAELFNAMPEHPV-----------AAC------------------- 270

Query: 392 GLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
                   NA++  +G+ G +D ++ VFE +  +D  +W++MI +Y  N    EAL  F 
Sbjct: 271 --------NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFR 322

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCG 511
            M    V  +  +++S L+  ++L++L  G+E++  ++R  F+++    S+L+ MY +CG
Sbjct: 323 EMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCG 382

Query: 512 ALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLY 571
            LD A +VF+  + KD+++W SMI     HG G+ A+ +F+ M     +PD IT++  L 
Sbjct: 383 NLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALT 442

Query: 572 ACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTA 631
           ACS++G + EG++    M  +  + P  EHY+C+VDLLGR+  +EEA+  +++M +EP A
Sbjct: 443 ACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDA 502

Query: 632 EVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRM 691
            +W AL+GACR+H N E+ E  AKKLLEL+PGN G YVL+S+++ +  +W+D  ++R  +
Sbjct: 503 VIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFI 562

Query: 692 RGSGLKKTPGSSWIEIGNKIHSFIARDK-SHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
               L K+PG SWIE   ++H F + D  +H E   I + L E  + L  E GY A   F
Sbjct: 563 SSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRIL-EKLDGLLMESGYSADGSF 621

Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
           VLH+++EE+K   L  HSER A+AYG+LK  EG  IR+ KNLRVC DCHS  KL++++  
Sbjct: 622 VLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITS 681

Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
           RE+++RDANRFHHF+ G CSC DYW
Sbjct: 682 REIILRDANRFHHFKDGFCSCRDYW 706



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 141/288 (48%), Gaps = 21/288 (7%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEP------LRVLETYSRMRVLGIS 55
           Y + G + +A  LFD++ +R V +W AM+  Y  NGE         V+   + +    + 
Sbjct: 184 YCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML 243

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           V       V  A  +       A     V  C         N+++  + +      A+ +
Sbjct: 244 VGYIQAGHVEDAAELFN-----AMPEHPVAAC---------NAMMVGFGQRGMVDAAKTV 289

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           F++M E++D   W+++I AY  +   +EAL  FREM   G+  N  + ++ L  C   + 
Sbjct: 290 FEKMCERDDGT-WSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAV 348

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
              G E+HAA ++   ++ V+  +ALI MY +CG + +A  V +  E KD V WNSM+TG
Sbjct: 349 LDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITG 408

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           + Q+ L  +A+  F +++ AG  PD +  + A++A    G +  G+E+
Sbjct: 409 YAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREI 456



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 128/234 (54%), Gaps = 3/234 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           +G+ G V  A+ +F+K+ +R   TW+AM+ AY  N   +  L T+  M   G+  +  + 
Sbjct: 277 FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++  CA L  LD G ++H  +L+C +D   F V++L+ MY KC +  KA+++F    E
Sbjct: 337 ISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF-E 395

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            +D+V+WNS+I+ Y+  G   +ALG+F +M+  G+  +  T++ AL AC  +     G E
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGRE 455

Query: 182 I-HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           I ++ TV S         + ++ +  R G + EA  ++  +    D+V W +++
Sbjct: 456 IFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A+++F     + +  WN+M+  Y  +G   + L  +  MR+ G+S D  T
Sbjct: 377 MYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGIT 436

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +   + AC+    +  G +I + + +           + +V +  +     +A  L   M
Sbjct: 437 YIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNM 496

Query: 120 GEKEDVVLWNSIISA 134
             + D V+W +++ A
Sbjct: 497 PVEPDAVIWGALMGA 511


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/562 (36%), Positives = 343/562 (61%), Gaps = 5/562 (0%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G+++HA  +  G+   L +   L+ MYA+C  +     V   M  ++ +SWT +I+G
Sbjct: 51  LREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMISG 110

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ--TKEIHGYIIRKGLS 394
           Y+QN    +A +LF  +   G + +   + SVL +C+G + + Q   K++H + I+K   
Sbjct: 111 YSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFE 170

Query: 395 -DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
             + + ++++D+Y +  NI  +R VF+ + ++DVVS+T+++S Y   GL  EAL LF  +
Sbjct: 171 LHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQL 230

Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
               ++ + +T    L+A S LS +  GK+++G I+R+      ++ +SL+DMY++CG L
Sbjct: 231 YNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKL 290

Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
             + +VF+ +  + ++ W +M+   G HG     + LF  M  +   PD +T LA+L   
Sbjct: 291 LYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFM-CDKVKPDSVTLLAVLLGY 349

Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
           SH GL++EG    + +  +       +HY C++DLLGR+  LE+A   ++ M  +PT  +
Sbjct: 350 SHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAI 409

Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRG 693
           W +LLGACRVH+N  +GE VA+KL +++P N GNYV++SN++AA+R WKDV ++R  M  
Sbjct: 410 WGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRLRKLMLK 469

Query: 694 SGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH 753
             + K PG SW+ +   IH+F + ++ H   ++I  K+ EI   + +  G+V     VLH
Sbjct: 470 KTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAI-KAAGFVPDLSCVLH 528

Query: 754 NVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
           +V++E+K +ML GHSE+LAI +G++ +     I++ KNLR+CVDCH+F K VS+++GRE+
Sbjct: 529 DVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREI 588

Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
            +RD NRFH    G C+CGDYW
Sbjct: 589 SLRDKNRFHLITEGACTCGDYW 610



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 225/406 (55%), Gaps = 9/406 (2%)

Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
           + + AA+  C        G ++HA  V +G    +Y+A  L+ MYARCG + +A  VL  
Sbjct: 36  HDYDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDG 95

Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV-SASGRLG-NLL 278
           +  ++ VSW +M++G+ QN+   +A   F  +  AG +P++    + + S +G  G +  
Sbjct: 96  MPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQH 155

Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
             K++HA+AIK+ F   + +G++L+DMYA+   +    RVF  + A+D +S+TTI++GY 
Sbjct: 156 QIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYT 215

Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
           +     +AL LFR +  EG+  + +    +L A SGL  M   K++HG I+R+ L   + 
Sbjct: 216 RLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMA 275

Query: 399 L-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           L N+++D+Y KCG + YSR VF+++  + VVSW +M+  Y  +G+A E ++LF  M +  
Sbjct: 276 LQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCD-K 334

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIA 516
           V+ DS+TL++ L   S   ++ +G ++   I+++   L  +     ++D+  R G L+ A
Sbjct: 335 VKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKA 394

Query: 517 NKVFNCVQTKDL-ILWTSMINANGLHGR---GKVAIDLFYKMEAES 558
             +   +  +    +W S++ A  +H     G+      + +E E+
Sbjct: 395 LLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPEN 440



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 196/384 (51%), Gaps = 13/384 (3%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +   I  C   + L  G ++H  ++  GY    ++   LV MYA+C     A  + D M 
Sbjct: 38  YDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMP 97

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS--FETL 178
           E+ +VV W ++IS YS + +  EA  LF  M R G   N +T  + L +C  S    +  
Sbjct: 98  ER-NVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQ 156

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
             ++HA  +K    L ++V ++L+ MYAR   + EA  V   L  +D VS+ ++L+G+ +
Sbjct: 157 IKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTR 216

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
             L  +A+  FR+L   G + +QV     ++A   L ++  GK++H   +++     + +
Sbjct: 217 LGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMAL 276

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N+L+DMY+KC  + Y  RVF  M  +  +SW  ++ GY ++    + ++LFR +  + +
Sbjct: 277 QNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFM-CDKV 335

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNA-----IVDVYGKCGNID 413
             D + + +VL+  S    + +  ++  +I+++  +   +LN      ++D+ G+ G ++
Sbjct: 336 KPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQST---LLNTQHYGCVIDLLGRSGQLE 392

Query: 414 YSRNVFESIESKDVVS-WTSMISS 436
            +  + + +  +   + W S++ +
Sbjct: 393 KALLLIQKMPFQPTRAIWGSLLGA 416



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 157/319 (49%), Gaps = 12/319 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CG++ DA  + D + +R V +W AM+  Y  N  P    + +  M   G   + FT
Sbjct: 79  MYARCGALEDAHNVLDGMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFT 138

Query: 61  FPCVIKACAMLKDLDCG--AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
              V+ +C   + +      ++H   +K  ++   F+ +SL+ MYA+  + ++AR++FD 
Sbjct: 139 LASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFD- 197

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M    DVV + +I+S Y+  G   EAL LFR++   G+  N  TF   L A    S    
Sbjct: 198 MLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDY 257

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++H   ++      + + N+LI MY++CGK+  +  V   +  +  VSWN+ML G+ +
Sbjct: 258 GKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGR 317

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           + +  + +Q FR       KPD V  +  +      G +  G ++  + +K+        
Sbjct: 318 HGMAYEVVQLFR-FMCDKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKE-------- 368

Query: 299 GNTLMDMYAKCCCVNYMGR 317
            +TL++     C ++ +GR
Sbjct: 369 QSTLLNTQHYGCVIDLLGR 387


>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
 gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
          Length = 703

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/679 (35%), Positives = 391/679 (57%), Gaps = 10/679 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGSV DA Q+F  + +R++F+WN ++ A+  N    + +E +  M   GI  D+ T
Sbjct: 30  MYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSAT 89

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ AC+ L+DL+ G KIH   L  G  S+  + N+LV+MYA+C     AR +FD++ 
Sbjct: 90  LSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARCSRLDVARVVFDKI- 148

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED-SSFETLG 179
           E + VV WN++I+A +  G+  +AL LF+ M+   L  N  TF +   AC        +G
Sbjct: 149 ESKSVVSWNAMIAACARQGEAEQALQLFKRME---LEPNEVTFASVFNACSLLPDHREVG 205

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
             IH     S     V VA A++ MY + GK+  A  V   +++K+ VSWN+ML  + QN
Sbjct: 206 KRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQN 265

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
           +L  +A++ + E+     + D+V  V A+  S  L  L  G ELH  ++  G+ S++++ 
Sbjct: 266 NLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHGYDSNIKVQ 325

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L+ MY KC  ++   RVF ++ A D +SWT +I  Y Q+  + +ALEL++ ++ EG++
Sbjct: 326 NALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGME 385

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKCGNIDYSRN 417
            D +   SVL ACS    +   + +H  ++  + G SD V++ A++++Y KCG +D S  
Sbjct: 386 PDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSE 445

Query: 418 VFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           +F+S  ++K VV W +MI++Y   G +  A++L+ +M +  ++ D  TL S LSA + L 
Sbjct: 446 IFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQ 505

Query: 477 ILKKGKELNGFII-RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
            L+KG++L+  II  +  +    V ++L+ MYA CG +  A  VF  ++ +D++ WT +I
Sbjct: 506 DLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILI 565

Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
           +A    G  + A+ L+ +M  E   P   TFL +  AC H+GL++E K + + M  D ++
Sbjct: 566 SAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGLVDECKWYFQSMIED-RI 624

Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
            P  +HY+C+V +L RA  LEEA   + SM   P +  W +LLGACR H + +     A 
Sbjct: 625 TPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGACRTHGDLKRARRAAD 684

Query: 656 KLLELDPGNPGNYVLISNV 674
           + +ELD  +   YVL+SNV
Sbjct: 685 EAMELDRQDSAPYVLLSNV 703



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 153/519 (29%), Positives = 280/519 (53%), Gaps = 14/519 (2%)

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
           L  G +IH  ++  G  S  F+ + L+ MY KC     A Q+F  +  +  +  WN II+
Sbjct: 2   LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSL-PRRSLFSWNFIIA 60

Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL--GMEIHAATVKSGQ 191
           A++ +    +A+ +FR M   G+  ++ T  + L AC  SS   L  G +IH+  +  G 
Sbjct: 61  AFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGAC--SSLRDLEEGKKIHSRALARGL 118

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
           +  + V NAL++MYARC ++  A  V  ++E+K  VSWN+M+    +     +A+Q F+ 
Sbjct: 119 SSSIIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKR 178

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           ++    +P++V   +  +A   L +    GK +H         +++ +   ++ MY K  
Sbjct: 179 ME---LEPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFG 235

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            V    +VF  +  ++ +SW  ++  Y QNN   +ALE++  +  + +  D + +   L 
Sbjct: 236 KVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALG 295

Query: 371 ACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
             + L+ +    E+H   +  G  S++ + NA++ +YGKC  +D +R VF  + + DVVS
Sbjct: 296 ISASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVS 355

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           WT++I +Y  +G   EALEL+  M    +E D +T  S LSA S+ S L+ G+ L+  ++
Sbjct: 356 WTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLL 415

Query: 490 --RKGFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMINANGLHGRGKV 546
             + GF+ +G + ++L++MY +CG LD+++++F +C  TK +++W +MI A    G  + 
Sbjct: 416 ARKDGFS-DGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRA 474

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
           A+DL+  M+     PD  T  ++L AC+    + +G++ 
Sbjct: 475 AVDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQL 513



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 150/466 (32%), Positives = 256/466 (54%), Gaps = 9/466 (1%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G  IHA  V SG     ++ + L+ MY +CG + +A  V + L  +   SWN ++  F +
Sbjct: 5   GRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAK 64

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N    KA++ FR +  AG KPD     + + A   L +L  GK++H+ A+ +G  S + +
Sbjct: 65  NRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIV 124

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N L+ MYA+C  ++    VF ++ ++  +SW  +IA  A+     +AL+LF+ ++LE  
Sbjct: 125 QNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRMELE-- 182

Query: 359 DADVMIIGSVLMACSGLKCMSQT-KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSR 416
             + +   SV  ACS L    +  K IH  I    L +++ +  AIV +YGK G +  +R
Sbjct: 183 -PNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMAR 241

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
            VF  I+ K+VVSW +M+ +Y  N L  EALE+++ M    V+ D +T+V AL  ++SL 
Sbjct: 242 QVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLR 301

Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
           +LK G EL+   +  G++    V ++L+ MY +C  LD A +VF+ V+  D++ WT++I 
Sbjct: 302 LLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIV 361

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           A   HGR + A++L+ +ME E   PD +TF ++L ACS++  +  G+      R   + D
Sbjct: 362 AYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALH--ARLLARKD 419

Query: 597 PWPEH--YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
            + +    A L+++  +   L+ + +  +S +      VW A++ A
Sbjct: 420 GFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITA 465



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 225/414 (54%), Gaps = 15/414 (3%)

Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
           L  G+ +HA+ +  G  SD  +G+ L+ MY KC  V+   +VF+ +  +   SW  IIA 
Sbjct: 2   LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAA 61

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL 396
           +A+N    KA+E+FR++   G+  D   + SVL ACS L+ + + K+IH   + +GLS  
Sbjct: 62  FAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSS 121

Query: 397 VIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
           +I+ NA+V +Y +C  +D +R VF+ IESK VVSW +MI++    G A +AL+LF  M  
Sbjct: 122 IIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM-- 179

Query: 456 ANVESDSITLVSALSAASSLSILKK-GKELNGFIIRKGFNLEG--SVASSLVDMYARCGA 512
             +E + +T  S  +A S L   ++ GK ++  I  +G +LE   +VA+++V MY + G 
Sbjct: 180 -ELEPNEVTFASVFNACSLLPDHREVGKRIHDRI--RGSHLEANVTVATAIVTMYGKFGK 236

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           + +A +VFN +Q K+++ W +M+ A   +   + A++++++M A+    D +T +  L  
Sbjct: 237 VGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGI 296

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
            +   L+  G +  E +   +  D   +    L+ + G+ N L+ A +    ++      
Sbjct: 297 SASLRLLKLGIELHE-LSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVS 355

Query: 633 VWCALLGACRVHS-NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVE 685
            W AL+ A   H  N+E  E+   K +E +   P + V  ++V +A     D+E
Sbjct: 356 -WTALIVAYTQHGRNREALELY--KQMEGEGMEP-DKVTFTSVLSACSNTSDLE 405


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/700 (34%), Positives = 387/700 (55%), Gaps = 11/700 (1%)

Query: 10  DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
           DA ++F       V+ WN ++   + N     V + +  M       D++T+  V+ ACA
Sbjct: 25  DAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQKPDSYTYSSVLAACA 84

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
            L++L  G  +   V+KCG +   F+  S+V +YAKC    +AR++F R+     VV W 
Sbjct: 85  SLEELRFGKVVQARVIKCGAEDV-FVCTSIVDLYAKCGHMAEAREVFSRI-SNPSVVSWT 142

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
            ++S Y+ S     AL +FREM+  G+  N+ T  + + AC   S      ++HA   KS
Sbjct: 143 VMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKS 202

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN-KDSVSWNSMLTGFVQNDLYCKAMQF 248
           G  L   VA ALI+M ++ G +  +  V   L++ +     N M+T F QN    KA++ 
Sbjct: 203 GFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQNKKPGKAIRL 262

Query: 249 FRELQGAGQKPDQ--VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMY 306
           F  +   G  PD+  VC++ +V     L  L  GK++H+Y +K G + DL +G++L  MY
Sbjct: 263 FTRMLQEGLNPDEFSVCSLLSV-----LDCLNLGKQVHSYTLKSGLILDLTVGSSLFTMY 317

Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
           +KC  +     +F ++  +D   W ++I+G+ +     +A+ LF  +  EG   D   + 
Sbjct: 318 SKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLA 377

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESK 425
           +VL  CS L  + ++KEIHGY +R G+   + L +A+V+ Y KCG++  +R V++ +   
Sbjct: 378 AVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEM 437

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           D VS +S+IS Y  +GL  +   LF  M  +    DS  + S L AA      + G +++
Sbjct: 438 DPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVH 497

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
            +I + G   E SV SSL+ MY++ G+++   K F+ +   DLI WT++I +   HG+  
Sbjct: 498 AYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIASYAQHGKAN 557

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACL 605
            A+ ++  M+ + F PD +TF+ +L ACSH GL+ EG   L  M  DY ++P   HY C+
Sbjct: 558 EALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCM 617

Query: 606 VDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNP 665
           VD LGR+  L EA  F+ +  I+P A VW  LL AC+++ + ELG++ AKK +EL+P + 
Sbjct: 618 VDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIELEPSDA 677

Query: 666 GNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
           G YV +SN+ A   +W +VE+ R  M+G+G++K PG S +
Sbjct: 678 GAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 717



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 286/553 (51%), Gaps = 9/553 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG + +A ++F ++S  +V +W  ML  Y  + +    LE +  MR  G+ +++ T
Sbjct: 116 LYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCT 175

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI AC     +   +++H  V K G+     +  +L++M +K  D   + ++F+ + 
Sbjct: 176 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLD 235

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +     + N +++++S + +  +A+ LF  M + GL  + ++  + L   +      LG 
Sbjct: 236 DIRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLD---CLNLGK 292

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H+ T+KSG  L + V ++L  MY++CG + E+  +  ++  KD+  W SM++GF +  
Sbjct: 293 QVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYG 352

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A+  F E+   G  PD+      ++    L +L   KE+H Y ++ G    + +G+
Sbjct: 353 YLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGS 412

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L++ Y+KC  +    +V+ ++   D +S +++I+GY+Q+        LFR + + G   
Sbjct: 413 ALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSM 472

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
           D   I S+L A    +      ++H YI + GL ++  + ++++ +Y K G+I+     F
Sbjct: 473 DSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAF 532

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             I   D+++WT++I+SY  +G ANEAL+++ LM E   + D +T V  LSA S   +++
Sbjct: 533 SQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVE 592

Query: 480 KGK-ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINA 537
           +G   LN  +   G   E      +VD   R G L  A    N    K D ++W +++ A
Sbjct: 593 EGYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAA 652

Query: 538 NGLHGR---GKVA 547
             ++G    GK+A
Sbjct: 653 CKIYGDVELGKLA 665



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 199/382 (52%), Gaps = 10/382 (2%)

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           V ++LI  +++  +  +A  V     + +   WN+++ G ++N  Y      F E+    
Sbjct: 9   VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGF 68

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
           QKPD     + ++A   L  L  GK + A  IK G   D+ +  +++D+YAKC  +    
Sbjct: 69  QKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKCGHMAEAR 127

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
            VF +++    +SWT +++GY ++N    ALE+FR ++  G++ +   + SV+ AC    
Sbjct: 128 EVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPS 187

Query: 377 CMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFE---SIESKDVVSWTS 432
            + +  ++H ++ + G   D  +  A++ +  K G+I+ S  VFE    I  +++V+   
Sbjct: 188 MVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN--V 245

Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
           M++S+  N    +A+ LF  M +  +  D  ++ S LS    L  L  GK+++ + ++ G
Sbjct: 246 MVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSV---LDCLNLGKQVHSYTLKSG 302

Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
             L+ +V SSL  MY++CG+L+ +  +F  +  KD   W SMI+    +G  + AI LF 
Sbjct: 303 LILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFS 362

Query: 553 KMEAESFAPDHITFLALLYACS 574
           +M  E  +PD  T  A+L  CS
Sbjct: 363 EMLDEGTSPDESTLAAVLTVCS 384



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 1/188 (0%)

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
           V+ ++++D + K    + +  VF    S +V  W ++I+  + N       +LF+ M   
Sbjct: 8   VVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNG 67

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
             + DS T  S L+A +SL  L+ GK +   +I+ G   +  V +S+VD+YA+CG +  A
Sbjct: 68  FQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEA 126

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            +VF+ +    ++ WT M++          A+++F +M       +  T  +++ AC   
Sbjct: 127 REVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRP 186

Query: 577 GLINEGKK 584
            ++ E  +
Sbjct: 187 SMVCEASQ 194


>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
 gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/587 (36%), Positives = 333/587 (56%), Gaps = 33/587 (5%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
           K +HA+ I+   + D+   + L+ +      ++Y  +VFYQ+   +   + + I G++ +
Sbjct: 32  KIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGS 91

Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
               K+   +   +  GL  D +    ++ AC+    +    + HG IIR G  SD+ + 
Sbjct: 92  KDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQ 151

Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM-------------------------- 433
           N++V +Y   G+I  +  VF  I   DVVSWTSM                          
Sbjct: 152 NSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLV 211

Query: 434 -----ISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
                IS Y  N   ++A+EL++L+    V ++   +VS +++ + L  L+ G+  + +I
Sbjct: 212 TWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYI 271

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
           +R    +   + ++LVDMYARCG++D A  VF+ +  +D + WT++I    +HG  + A+
Sbjct: 272 LRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKAL 331

Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
           + F +ME     P  ITF A+L ACSH GL+  G +  E M+ DY+++P  EHY C+VDL
Sbjct: 332 EYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDL 391

Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNY 668
           LGRA  L EA +FV  M ++P A +W ALLGACR+H N E+ E   K L+EL P + G Y
Sbjct: 392 LGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYY 451

Query: 669 VLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIY 728
           VL+SN++A + KW++VE +R  M+  G+ K PG +  E+  K+H F   DK+H E  +I 
Sbjct: 452 VLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIE 511

Query: 729 KKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRI 788
           +   EI  K+ R  GY       L +++EEEK   ++ HSE+LAIAY ++++     IRI
Sbjct: 512 RMWEEILGKI-RLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRI 570

Query: 789 TKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            KNLRVC DCH+  KL+S+++ REL+VRD NRFHHF+ G CSC DYW
Sbjct: 571 VKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 168/350 (48%), Gaps = 40/350 (11%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A Q+F ++    +F +N+ +  +  + +P +    Y + +  G+  D  T+P ++KAC  
Sbjct: 66  AAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQ 125

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK-------CYDFRK------------ 111
              LD G + HG +++ G+DS  ++ NSLV MY+         Y FR+            
Sbjct: 126 KGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSM 185

Query: 112 ------------ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN 159
                       AR+LFD+M EK ++V W+ +IS Y+ +    +A+ L+  +Q  G+  N
Sbjct: 186 VAGYIKSGDVTSARKLFDKMPEK-NLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHAN 244

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY 219
               V+ + +C       LG   H   +++   + + +  AL+ MYARCG + +A  V  
Sbjct: 245 ETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFD 304

Query: 220 QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN 279
           QL  +D++SW +++ GF  +    KA+++F  ++ AG  P ++     +SA    G +  
Sbjct: 305 QLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVER 364

Query: 280 GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
           G EL      +    D +I   L + Y   C V+ +GR      A+ F++
Sbjct: 365 GLELF-----ESMKRDYRIEPRL-EHYG--CMVDLLGRAGKLAEAEKFVN 406



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 170/360 (47%), Gaps = 46/360 (12%)

Query: 65  IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           +++C  L  L     IH  +++       F  + L+++         A Q+F ++ +  +
Sbjct: 22  LESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQI-QNPN 77

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
           + ++NS I  +S S    ++   + + +R GLV +  T+   ++AC       +G++ H 
Sbjct: 78  LFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHG 137

Query: 185 ATVKSGQNLQVYVANALIAMYA-------------------------------RCGKMTE 213
             ++ G +  VYV N+L+ MY+                               + G +T 
Sbjct: 138 QIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTS 197

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +  ++  K+ V+W+ M++G+ +N  + KA++ +  LQ  G   ++   V+ +++   
Sbjct: 198 ARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAH 257

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           LG L  G+  H Y ++     +L +G  L+DMYA+C  ++    VF Q+  +D +SWTT+
Sbjct: 258 LGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTL 317

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
           IAG+A +    KALE F  ++  GL    +   +VL ACS           HG ++ +GL
Sbjct: 318 IAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACS-----------HGGLVERGL 366



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 7/236 (2%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G V  A +LFDK+ ++ + TW+ M+  Y  N    + +E Y  ++  G+  +    
Sbjct: 189 YIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVM 248

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             VI +CA L  L+ G + H  +L+        +  +LV MYA+C    KA  +FD++  
Sbjct: 249 VSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPG 308

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D + W ++I+ ++  G   +AL  F  M++ GL     TF A L AC        G+E
Sbjct: 309 R-DALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLE 367

Query: 182 IHAATVKSGQ---NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
           +  +  +  +    L+ Y    ++ +  R GK+ EA   + ++  K +   W ++L
Sbjct: 368 LFESMKRDYRIEPRLEHY--GCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALL 421



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 4/194 (2%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           S L +C+ L   S  K IH ++IR   + D+   + ++ +      +DY+  VF  I++ 
Sbjct: 20  SFLESCTTL---SHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNP 76

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           ++  + S I  +  +   +++   +       +  D++T    + A +    L  G + +
Sbjct: 77  NLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAH 136

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
           G IIR GF+ +  V +SLV MY+  G +  A+ VF  +   D++ WTSM+      G   
Sbjct: 137 GQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVT 196

Query: 546 VAIDLFYKMEAESF 559
            A  LF KM  ++ 
Sbjct: 197 SARKLFDKMPEKNL 210



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 23/146 (15%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGS+  A  +FD++  R   +W  ++  +  +G   + LE +SRM   G++    T
Sbjct: 289 MYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREIT 348

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYD-----STDFIVNS-------LVAMYAKCYD 108
           F  V+ AC+           HG +++ G +       D+ +         +V +  +   
Sbjct: 349 FTAVLSACS-----------HGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGK 397

Query: 109 FRKARQLFDRMGEKEDVVLWNSIISA 134
             +A +  + M  K +  +W +++ A
Sbjct: 398 LAEAEKFVNEMPMKPNAPIWGALLGA 423



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 50/114 (43%)

Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
           LS   S + L   K ++  +IR     +   AS L+ +      LD A +VF  +Q  +L
Sbjct: 19  LSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNL 78

Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
            ++ S I           +   + + +     PD++T+  L+ AC+  G ++ G
Sbjct: 79  FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMG 132


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/692 (33%), Positives = 387/692 (55%), Gaps = 4/692 (0%)

Query: 54  ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
           I +++ T+  +I AC  ++ L  G KIH  +LK        + N ++ MY KC   + AR
Sbjct: 153 IQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDAR 212

Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
           + FD M +  +VV W  +IS YS +GQ  +A+ ++ +M + G   +  TF + ++AC  +
Sbjct: 213 KAFDTM-QLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIA 271

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
               LG ++H   +KSG +  +   NALI+MY R G++  A+ V   +  KD +SW SM+
Sbjct: 272 GDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMI 331

Query: 234 TGFVQNDLYCKAMQFFRELQGAG-QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
           TGF Q     +A+  FR++   G  +P++    +  SA   L     G+++H    K G 
Sbjct: 332 TGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGL 391

Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
             ++  G +L DMYAK   +    R FYQ+ + D +SW  IIA ++ +    +A+  F  
Sbjct: 392 GRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQ 451

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGN 411
           +   GL  D +   S+L AC     ++Q  +IH YII+ GL  +  + N+++ +Y KC N
Sbjct: 452 MMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSN 511

Query: 412 IDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
           +  + NVF+ + E+ ++VSW +++S+ + +  A E   LF LM  +  + D+IT+ + L 
Sbjct: 512 LHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILG 571

Query: 471 AASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLIL 530
             + L+ L+ G +++ F ++ G  ++ SV++ L+DMYA+CG+L  A  VF   Q  D++ 
Sbjct: 572 TCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVS 631

Query: 531 WTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
           W+S+I      G G  A++LF  M+     P+ +T+L +L ACSH GL+ EG  F   M 
Sbjct: 632 WSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTME 691

Query: 591 CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELG 650
            +  + P  EH +C+VDLL RA  L EA  F++ M   P   +W  LL +C+ H N ++ 
Sbjct: 692 IELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIA 751

Query: 651 EIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNK 710
           E  A+ +L+LDP N    VL+SN+ A+   WK+V ++R  M+  G++K PG SWI + ++
Sbjct: 752 ERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQ 811

Query: 711 IHSFIARDKSHSESDEIYKKLAEITEKLEREG 742
           IH F + D SH +  +IY  L ++  ++  +G
Sbjct: 812 IHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDG 843



 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 169/552 (30%), Positives = 285/552 (51%), Gaps = 6/552 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCGS+ DA + FD +  R V +W  M+  Y  NG+    +  Y +M   G   D  T
Sbjct: 201 MYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLT 260

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  +IKAC +  D+D G ++HG V+K GYD      N+L++MY +      A  +F  + 
Sbjct: 261 FGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMIS 320

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLG 179
            K D++ W S+I+ ++  G  +EAL LFR+M R G    N + F +   AC        G
Sbjct: 321 TK-DLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFG 379

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
            +IH    K G    V+   +L  MYA+ G +  A    YQ+E+ D VSWN+++  F  +
Sbjct: 380 RQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDS 439

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
               +A+ FF ++   G  PD +  ++ + A G    +  G ++H+Y IK G   +  + 
Sbjct: 440 GDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVC 499

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
           N+L+ MY KC  ++    VF  ++   + +SW  I++   Q+    +   LF+ +     
Sbjct: 500 NSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSEN 559

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             D + I ++L  C+ L  +    ++H + ++ GL  D+ + N ++D+Y KCG++ ++R+
Sbjct: 560 KPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARD 619

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF S ++ D+VSW+S+I  Y   GL +EAL LF +M    V+ + +T +  LSA S + +
Sbjct: 620 VFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGL 679

Query: 478 LKKGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDLILWTSMI 535
           +++G    N   I  G        S +VD+ AR G L +  N +       D+ +W +++
Sbjct: 680 VEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLL 739

Query: 536 NANGLHGRGKVA 547
            +   HG   +A
Sbjct: 740 ASCKTHGNVDIA 751



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 445 EALELF-YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
           EAL+ F +    ++++ +S T  + + A +S+  LK GK+++  I++     +  + + +
Sbjct: 139 EALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHI 198

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           ++MY +CG+L  A K F+ +Q ++++ WT MI+    +G+   AI ++ +M    + PD 
Sbjct: 199 LNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDP 258

Query: 564 ITFLALLYACSHSGLINEGKKF 585
           +TF +++ AC  +G I+ G++ 
Sbjct: 259 LTFGSIIKACCIAGDIDLGRQL 280


>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 558

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/561 (39%), Positives = 343/561 (61%), Gaps = 9/561 (1%)

Query: 279 NGKELHAYAIKQGFVSD-LQIGNTLMDMYAKCC-CVNYMGRVFYQMTAQDFISWTTIIAG 336
           N   LH Y IK    +D L +   L+   A     ++Y   VF ++ + D I++ TII  
Sbjct: 3   NVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRS 62

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SD 395
           +++      +L  F +++  G+  D      VL ACS L+       +H  I++ GL SD
Sbjct: 63  HSRFFPS-HSLSYFFSMRSNGIPLDNFTFPFVLKACSRLQI---NLHLHSLIVKYGLGSD 118

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN- 454
           + + NA++ VYG CG+++ +  VF+ +  +D VSW+++I+S+++NG A+EAL+LF  M  
Sbjct: 119 IFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQL 178

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
           E  V  D +T++S +SA S L  L+ G+ +  FI R GF +  ++ ++L+DM++RCG++D
Sbjct: 179 EDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSID 238

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            +  VF  +  ++++ WT++IN  G+HGR   A+ +F+ M      PD++TF  +L ACS
Sbjct: 239 ESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACS 298

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           H GL+ EG    E +R  Y +DP  +HY C+VD+LGRA  L EAY FV  M ++P + +W
Sbjct: 299 HGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIW 358

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
             LLGAC  H+N  L E V  K+ ++     G+ VL+SNV+ A+ +W +   +R +MR  
Sbjct: 359 RTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREK 418

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
            + K PG S I +   IH F++ D SH +S++I K L+ I   L R  GY+ QT+ VLH+
Sbjct: 419 RIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDL-RNRGYMMQTKNVLHD 477

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           +EEEE+   L  HSE+LA+A+ +L   +   IRI KNLR+C DCHSF K +S  F R+++
Sbjct: 478 IEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKII 537

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RD NRFHHFE G+CSC DYW
Sbjct: 538 IRDRNRFHHFEKGLCSCHDYW 558



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 180/338 (53%), Gaps = 12/338 (3%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           AR +F R+    D + +N+II ++S       +L  F  M+  G+  + +TF   L+AC 
Sbjct: 41  ARYVFSRI-PSPDTIAYNTIIRSHSRFFPS-HSLSYFFSMRSNGIPLDNFTFPFVLKAC- 97

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
             S   + + +H+  VK G    ++V NALI +Y  CG +  A  V  ++  +DSVSW++
Sbjct: 98  --SRLQINLHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWST 155

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQK-PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           ++  F+ N    +A+  F ++Q   +  PD+V  ++ +SA   LG+L  G+ + A+  + 
Sbjct: 156 VIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRL 215

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           GF   + +G  L+DM+++C  ++    VF +M  ++ ++WT +I G   +   ++AL +F
Sbjct: 216 GFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMF 275

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK--GLSDLV-ILNAIVDVYG 407
            +++  G+  D +    VL+ACS    + +  +I    IRK  G+  L+     +VD+ G
Sbjct: 276 HSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFES-IRKVYGMDPLLDHYGCMVDILG 334

Query: 408 KCGNIDYSRNVFESIESK-DVVSWTSMISSYV-HNGLA 443
           + G ++ + +  E +  K + + W +++ + V HN L 
Sbjct: 335 RAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLG 372



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 165/342 (48%), Gaps = 24/342 (7%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F ++       +N ++ ++ S   P   L  +  MR  GI +D FTFP V+KAC+ 
Sbjct: 41  ARYVFSRIPSPDTIAYNTIIRSH-SRFFPSHSLSYFFSMRSNGIPLDNFTFPFVLKACSR 99

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L+       +H L++K G  S  F+ N+L+ +Y  C     A ++FD M E+ D V W++
Sbjct: 100 LQ---INLHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSER-DSVSWST 155

Query: 131 IISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           +I+++  +G   EAL LF +MQ    +V +  T ++ + A        LG  + A   + 
Sbjct: 156 VIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRL 215

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G  + V +  ALI M++RCG + E+  V  ++  ++ ++W +++ G   +    +A+  F
Sbjct: 216 GFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMF 275

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
             ++ +G +PD V     + A    G +  G ++   +I++ +  D      L+D Y   
Sbjct: 276 HSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFE-SIRKVYGMD-----PLLDHYG-- 327

Query: 310 CCVNYMGRVFYQMTAQDFIS----------WTTIIAGYAQNN 341
           C V+ +GR      A DF+           W T++     +N
Sbjct: 328 CMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHN 369



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 140/278 (50%), Gaps = 6/278 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           +YG CGS+  A ++FD++S+R   +W+ ++ ++++NG     L+ + +M++   +  D  
Sbjct: 128 VYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEV 187

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   VI A + L DL+ G  +   + + G+  +  +  +L+ M+++C    ++  +F++M
Sbjct: 188 TMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKM 247

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + +V+ W ++I+     G+ +EAL +F  M++ G+  +  TF   L AC        G
Sbjct: 248 AVR-NVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEG 306

Query: 180 MEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLTGFV 237
            +I  +  K  G +  +     ++ +  R G + EA   + ++  K +S+ W ++L   V
Sbjct: 307 WDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACV 366

Query: 238 QNDLYCKAMQFFRELQ--GAGQKPDQVCTVNAVSASGR 273
            ++    A +   ++    + Q  D V   N   A+GR
Sbjct: 367 NHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGR 404


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/705 (33%), Positives = 379/705 (53%), Gaps = 16/705 (2%)

Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
           S  G+  EA   F+EM + G+  + Y++    +AC +    + G  +H       +N  V
Sbjct: 57  SKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSV 116

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
            + N ++ MY  CG + +A  +  ++ + ++VS  +M++ + +  L  KA+  F  +  +
Sbjct: 117 LLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLES 176

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           G KP        + +      L  G+++HA+ I+ G  S+  I   +++MY KC  +   
Sbjct: 177 GDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGA 236

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
            RVF QM  +  ++WT ++ GY Q      AL+LF  +  EG++ D  +   VL AC+ L
Sbjct: 237 KRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASL 296

Query: 376 KCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           + +   K+IH  + + GL  ++ +   +VD Y KC + + +   F+ I   + VSW+++I
Sbjct: 297 EELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 356

Query: 435 SSYVHNGLANEALELFYLMNEAN-VESDSITLVSALSAASSLSILKKGKELNGFIIRKGF 493
           S Y       EA++ F  +   N V  +S T  S   A S L+    G +++   I++  
Sbjct: 357 SGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 416

Query: 494 NLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYK 553
                  S+L+ MY++CG LD A++VF  +   D++ WT+ I+ +  +G    A+ LF K
Sbjct: 417 IGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEK 476

Query: 554 MEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRAN 613
           M +    P+ +TF+A+L ACSH+GL+ +GK +L+ M   Y + P  +HY C++D+  R+ 
Sbjct: 477 MVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSG 536

Query: 614 HLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISN 673
            L+EA +F+++M  EP A  W   L  C  H N ELG+I  ++L +LDP +   YVL  N
Sbjct: 537 LLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFN 596

Query: 674 VFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAE 733
           ++  + KW++  +V   M    LKK    SWI+   KIH FI  DK H +S EIY+KL E
Sbjct: 597 LYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKE 656

Query: 734 ITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG---SLIRITK 790
                    G++    F     E  E+   L  HSERLAIA+G++ S  G   + I++ K
Sbjct: 657 FD-------GFMEGDMFQCSMTERREQ---LLDHSERLAIAFGLI-SVNGNARAPIKVFK 705

Query: 791 NLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           NLR C DCH F K VS + G E+V+RD+ RFHHF+ G CSC DYW
Sbjct: 706 NLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 273/552 (49%), Gaps = 10/552 (1%)

Query: 17  KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDC 76
           K+S +     N  L +   +G+     E +  M   G+SV  +++ C+ +AC  L+ L  
Sbjct: 40  KISHKQGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSH 99

Query: 77  GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYS 136
           G  +H  +     + +  + N ++ MY +C     A +LFD M +  + V   ++ISAY+
Sbjct: 100 GRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDL-NAVSRTTMISAYA 158

Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
             G   +A+GLF  M   G    +  +   L++  +     +G +IHA  +++G      
Sbjct: 159 EQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNAS 218

Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
           +   ++ MY +CG +  A  V  Q+  K  V+W  ++ G+ Q      A++ F +L   G
Sbjct: 219 IETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEG 278

Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
            + D       + A   L  L  GK++HA   K G   ++ +G  L+D Y KC       
Sbjct: 279 VEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESAC 338

Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGL 375
           R F ++   + +SW+ II+GY Q +   +A++ F++++ +  +  +     S+  ACS L
Sbjct: 339 RAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVL 398

Query: 376 KCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
              +   ++H   I++ L       +A++ +Y KCG +D +  VFES+++ D+V+WT+ I
Sbjct: 399 ADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFI 458

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
           S + + G A+EAL LF  M    ++ +S+T ++ L+A S   ++++GK     ++RK +N
Sbjct: 459 SGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRK-YN 517

Query: 495 LEGSVA--SSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMINANGLHGR---GKVAI 548
           +  ++     ++D+YAR G LD A +   N     D + W   ++    H     GK+A 
Sbjct: 518 VAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAG 577

Query: 549 DLFYKMEAESFA 560
           +   +++ E  A
Sbjct: 578 EELRQLDPEDTA 589



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 217/447 (48%), Gaps = 6/447 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +CGS+ DA++LFD++S     +   M+ AY   G   + +  +SRM   G    +  
Sbjct: 125 MYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSM 184

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  ++K+    + LD G +IH  V++ G  S   I   +V MY KC     A+++FD+M 
Sbjct: 185 YTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMA 244

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K+ V  W  ++  Y+ +G+  +AL LF ++   G+  +++ F   L+AC        G 
Sbjct: 245 VKKPVA-WTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGK 303

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           +IHA   K G   +V V   L+  Y +C     A     ++   + VSW+++++G+ Q  
Sbjct: 304 QIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMS 363

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAV-SASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
            + +A++ F+ L+          T  ++  A   L +   G ++HA AIK+  +      
Sbjct: 364 QFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE 423

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           + L+ MY+KC C++    VF  M   D ++WT  I+G+A      +AL LF  +   G+ 
Sbjct: 424 SALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMK 483

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYSRN 417
            + +   +VL ACS    + Q K     ++RK      I   + ++D+Y + G +D +  
Sbjct: 484 PNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALR 543

Query: 418 VFESIE-SKDVVSWTSMISS-YVHNGL 442
             +++    D +SW   +S  + H  L
Sbjct: 544 FMKNMPFEPDAMSWKCFLSGCWTHKNL 570


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/537 (39%), Positives = 335/537 (62%), Gaps = 7/537 (1%)

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
           N L++MY K   ++    VF +M  ++ +SWTT+I+ Y+    + KALE    +  EG+ 
Sbjct: 4   NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
            ++    SVL AC GL  + Q   +H  II+ GL SD+ + +A++DVY + G ++ +  V
Sbjct: 64  PNMFTYSSVLRACDGLFNLRQ---LHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ + + D+V W+S+I+ +  N   +EAL LF  M  A   +   TL S L A + L++L
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
           + G++++  +++  ++ +  + ++L+DMY +CG+L+ AN VF  +  KD+I W++MI   
Sbjct: 181 ELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGL 238

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             +G  K A+ LF  M+     P+++T + +L+ACSH+GL+ EG  +   M+  + +DP 
Sbjct: 239 AQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPG 298

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY C++DLLGRA  L EA   +  M+ EP A  W ALL ACRVH N ++    AK++L
Sbjct: 299 REHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQIL 358

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
            LDP + G YVL+SN++A +++W DV +VR  M   G+KK PG SWIE+  +IH+FI  D
Sbjct: 359 RLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGD 418

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           +SH +  EI  +L ++  KL    GYV  T FVL ++E E+    L  HSE+LAI +G++
Sbjct: 419 RSHPQIREINIQLNQLIYKL-MGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLM 477

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
               G  IRI KNLR+C DCH F KL++++  R +V+RD  R+HHF+ G+CSCGD+W
Sbjct: 478 SLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 200/361 (55%), Gaps = 18/361 (4%)

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGA 255
           ++ N LI MY + G + +A  V  ++ +++ VSW +M++ +    L  KA++F   +   
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 256 GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
           G +P+     + + A   L NL   ++LH   IK G  SD+ + + L+D+Y++   +   
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
            RVF +M   D + W++IIAG+AQN+   +AL LF+ ++  G  A    + SVL AC+GL
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 376 KCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
             +   +++H ++++    DL++ NA++D+Y KCG+++ +  VF  +  KDV+SW++MI+
Sbjct: 178 ALLELGRQVHVHVLKYD-QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236

Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-------KELNGFI 488
               NG + EAL+LF  M    ++ + +T+V  L A S   ++++G       KEL G  
Sbjct: 237 GLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFG-- 294

Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVA 547
           I  G    G     ++D+  R G L  A  + N ++ + D + W +++NA  +H    VA
Sbjct: 295 IDPGREHYG----CMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVA 350

Query: 548 I 548
           I
Sbjct: 351 I 351



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 190/351 (54%), Gaps = 19/351 (5%)

Query: 94  FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR 153
           F++N L+ MY K      A+ +FD+M ++ +VV W ++ISAYSA+    +AL     M R
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDR-NVVSWTTMISAYSAAKLNDKALEFLVLMLR 59

Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            G+  N +T+ + L+AC D  F     ++H   +K G +  V+V +ALI +Y+R G++  
Sbjct: 60  EGVRPNMFTYSSVLRAC-DGLFNL--RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  V  ++   D V W+S++ GF QN    +A++ F+ ++ AG    Q    + + A   
Sbjct: 117 ALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTG 176

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
           L  L  G+++H + +K  +  DL + N L+DMY KC  +     VF +M  +D ISW+T+
Sbjct: 177 LALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHG 386
           IAG AQN    +AL+LF ++++ G+  + + I  VL ACS       GL      KE+ G
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFG 294

Query: 387 YIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
             I  G         ++D+ G+ G +  + ++   +E   D V+W +++++
Sbjct: 295 --IDPGREH---YGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA 340



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 151/275 (54%), Gaps = 6/275 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY K G + DA+ +FDK+  R V +W  M+ AY +     + LE    M   G+  + FT
Sbjct: 9   MYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFT 68

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  V++AC  L +L    ++H  ++K G DS  F+ ++L+ +Y++  +   A ++FD M 
Sbjct: 69  YSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEM- 124

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
              D+V+W+SII+ ++ +    EAL LF+ M+R G +    T  + L+AC   +   LG 
Sbjct: 125 VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGR 184

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H   +K  Q+L   + NAL+ MY +CG + +A  V  ++  KD +SW++M+ G  QN 
Sbjct: 185 QVHVHVLKYDQDL--ILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNG 242

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
              +A++ F  ++  G KP+ V  V  + A    G
Sbjct: 243 YSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAG 277



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 120/237 (50%), Gaps = 5/237 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y + G + +A ++FD++    +  W++++  +  N +    L  + RM+  G      T
Sbjct: 107 VYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTT 166

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V++AC  L  L+ G ++H  VLK  YD    + N+L+ MY KC     A  +F RM 
Sbjct: 167 LTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMV 224

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK DV+ W+++I+  + +G   EAL LF  M+ +G+  N  T V  L AC  +     G+
Sbjct: 225 EK-DVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGL 283

Query: 181 -EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
              H+     G +        +I +  R G+++EA  ++ ++E   D+V+W ++L  
Sbjct: 284 YYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA 340


>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/716 (32%), Positives = 398/716 (55%), Gaps = 5/716 (0%)

Query: 25  TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
           ++N+++      G   +VL+TY  M+     +DA+TFP + KAC  L     G  +H  V
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 85  LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
           +  G     +I +SL++ YAK       R++FD M  K +VV W +II +YS  G    A
Sbjct: 76  VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTM-LKRNVVPWTTIIGSYSREGDIDIA 134

Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
             +F++M+  G+   + T ++ L      S   L + +H   +  G    + ++N+++ M
Sbjct: 135 FSMFKQMRESGIQPTSVTLLSLLPGI---SKLPLLLCLHCLIILHGFESDLALSNSMVNM 191

Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCT 264
           Y +CG++ +A  +   +  +D VSWNS+L+ + +     + +Q  + ++    KPD+   
Sbjct: 192 YGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251

Query: 265 VNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTA 324
            +A+SAS   G+L  GK +H   +K G   D  + + L+ +Y +C C++   +VF   T 
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311

Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
           +D + WT +I+G  QN+C  KAL +F  +    +      + S L AC+ L C      I
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371

Query: 385 HGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
           HGY++R+G+  D+   N++V +Y KC  +  S ++F  +  KD+VSW ++++ +  NG  
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431

Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
           ++ +  F  M ++ +  DSIT+ S L A  S   L +GK ++ F++R          ++L
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491

Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
           VDMY +CG L+ A K F+C+  +DL+ W+++I   G +G+G++A+  + +       P+H
Sbjct: 492 VDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNH 551

Query: 564 ITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
           + F+++L ACSH GLI++G    E M  D+++ P  EH AC+VDLL RA  ++EAY F +
Sbjct: 552 VIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYK 611

Query: 624 SMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKD 683
            M  EP+  V   LL ACRV+   ELG+++A+ + EL P +PGN+V ++N +A+  +W  
Sbjct: 612 MMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDG 671

Query: 684 VEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLE 739
           VE+   +MR  GLKK PG S IE+     +F A   SH + ++I   +  +++ + 
Sbjct: 672 VEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKIILTVKALSKNIR 727



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 172/580 (29%), Positives = 294/580 (50%), Gaps = 18/580 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +    ++FD + +R V  W  ++G+Y   G+       + +MR  GI   + T 
Sbjct: 94  YAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTL 153

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++     +  L     +H L++  G++S   + NS+V MY KC     AR+LF+ +G 
Sbjct: 154 LSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGC 210

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + D+V WNS++SAYS  G   E L L + M+   +  +  TF +AL A        LG  
Sbjct: 211 R-DIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKL 269

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H   +K G N+  +V +AL+ +Y RC  +  A  V      KD V W +M++G VQND 
Sbjct: 270 VHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDC 329

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
             KA+  F ++  +  KP      + ++A  +LG    G  +H Y ++QG + D+   N+
Sbjct: 330 ADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNS 389

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ MYAKC  +     +F +M  +D +SW  I+AG+A+N    K +  F  ++   L  D
Sbjct: 390 LVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPD 449

Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFE 420
            + + S+L AC     + Q K IH +++R  L   ++   A+VD+Y KCGN++ ++  F+
Sbjct: 450 SITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFD 509

Query: 421 SIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKK 480
            +  +D+V+W+++I  Y  NG    AL  +       +E + +  +S LSA S   ++ K
Sbjct: 510 CMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISK 569

Query: 481 GKELNGFI---IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV-QTKDLILWTSMIN 536
           G  +   +    R   NLE    + +VD+ +R G +D A   +  + +   +++   +++
Sbjct: 570 GLSIYESMTKDFRMSPNLEHR--ACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLD 627

Query: 537 ANGLHGR---GKV-AIDLFYKMEAESFAPDHITFLALLYA 572
           A  ++GR   GKV A D+F   E +   P +   LA  YA
Sbjct: 628 ACRVNGRVELGKVIARDMF---ELKPVDPGNFVQLANSYA 664



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 215/433 (49%), Gaps = 25/433 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + DA +LF+ +  R + +WN++L AY   G    +L+    M++  I  D  T
Sbjct: 191 MYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQT 250

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F   + A A+  DL  G  +HGL+LK G +    + ++LV +Y +C     A ++F    
Sbjct: 251 FCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTT 310

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           EK DVV+W ++IS    +    +ALG+F +M    +  +  T  + L AC       +G 
Sbjct: 311 EK-DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGA 369

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            IH   ++ G  L +   N+L+ MYA+C K+ ++  +  ++  KD VSWN+++ G  +N 
Sbjct: 370 SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNG 429

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              K + FF E++ +  +PD +   + + A G  G L  GK +H + ++   +  +    
Sbjct: 430 YLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTET 489

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY KC  +    + F  M  +D ++W+T+I GY  N     AL  +      G++ 
Sbjct: 490 ALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEP 549

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-------------DLVILNAIVDVYG 407
           + +I  SVL ACS           HG +I KGLS             +L     +VD+  
Sbjct: 550 NHVIFISVLSACS-----------HGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLS 598

Query: 408 KCGNIDYSRNVFE 420
           + G +D + + ++
Sbjct: 599 RAGKVDEAYSFYK 611


>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Brachypodium distachyon]
          Length = 773

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 245/697 (35%), Positives = 398/697 (57%), Gaps = 15/697 (2%)

Query: 23  VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHG 82
            F WN++L ++    +    L  + RMR  G     FT P    A A L  L  G  +H 
Sbjct: 78  TFLWNSLLRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHS 137

Query: 83  LVLKCGY---DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
             +K G    D +  + +SLV MYA+C     A +LFD M E+ DVV W +++S    +G
Sbjct: 138 YSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVER-DVVAWTAVVSGCVRNG 196

Query: 140 QCLEALGLFREMQRV----GLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
           +C + +    +M R+    G   N+ T  + L+AC      + G  +H   VK G     
Sbjct: 197 ECGKGICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCA 256

Query: 196 YVANALIAMYARCGKMTEAAGVLY-QLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
            V +AL +MY++C  MTE A +L+ +L  KD VSW  ++  + +  L  +A++ F+E++ 
Sbjct: 257 LVVSALFSMYSKC-DMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQ 315

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
           +G +PD+V     +S  G   N+  GK  HA  I++ F   + I N+L+ MY K   V+ 
Sbjct: 316 SGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDV 375

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD---ADVMIIGSVLMA 371
            G VF  +  +D  SW+ ++AGY +    +K LEL+R +Q    D    D+  + S + +
Sbjct: 376 AGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISS 435

Query: 372 CSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSW 430
           CS L  +   + +H Y I+  L +  I N+++ +YG+CGN + +  +F   +  +DVV+W
Sbjct: 436 CSRLGRLRLGQSVHCYSIKCLLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTW 495

Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
            ++ISSY H G +N+AL L+  M   +V+ +S TL++ +SA ++L+ L+ G+ L+ ++  
Sbjct: 496 NALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKN 555

Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
            G   + S++++LVDMY +CG L  A  +F+ +  +D++ W  MI+  G+HG    A+ L
Sbjct: 556 MGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKL 615

Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLG 610
           F +MEA S  P+ +TFLA+L AC H+GL++EG+K   I    Y+L+P  +HYAC+VDLLG
Sbjct: 616 FSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLF-IRMGGYRLEPNLKHYACMVDLLG 674

Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVL 670
           ++  L+EA   V +M I+P   VW  LL AC+VH N E+G  VAKK    DP N G Y+L
Sbjct: 675 KSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYIL 734

Query: 671 ISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
           +SN + ++ KW ++E++R  M+  G++K  G S +++
Sbjct: 735 MSNSYGSAEKWDEIEKLRDTMKNYGVEKGVGWSAVDV 771



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 169/553 (30%), Positives = 289/553 (52%), Gaps = 16/553 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL----GISV 56
           MY +CGS+ DA +LFD++ +R V  W A++   V NGE  + +    +M  L    G   
Sbjct: 160 MYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARP 219

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           ++ T    ++AC +L +L  G  +HG  +K G      +V++L +MY+KC     A  LF
Sbjct: 220 NSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILF 279

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
             + EK DVV W  +I AY   G   EA+ LF+EM++ GL  +       L     S+  
Sbjct: 280 PELTEK-DVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANV 338

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G   HA  ++      V +AN+LI+MY +   +  A  V   L  +D  SW+ M+ G+
Sbjct: 339 NRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGY 398

Query: 237 VQNDLYCKAMQFFRELQGAGQKP---DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
            +  L  K ++ +R++Q         D    V+A+S+  RLG L  G+ +H Y+IK   +
Sbjct: 399 CKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKC-LL 457

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVF-YQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
            +  I N+L+ MY +C       ++F      +D ++W  +I+ Y+       AL L+  
Sbjct: 458 DENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQ 517

Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGN 411
           +  E +  +   + +V+ AC+ L  +   + +H Y+   GL SD+ I  A+VD+Y KCG 
Sbjct: 518 MLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQ 577

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
           +  +R +F+S+  +DVV+W  MIS Y  +G AN+AL+LF  M   +++ +S+T ++ LSA
Sbjct: 578 LGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSA 637

Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DL 528
                ++ +G++L  FI   G+ LE ++   + +VD+  + G L  A  +   +  K D 
Sbjct: 638 CCHAGLVDEGRKL--FIRMGGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDG 695

Query: 529 ILWTSMINANGLH 541
            +W ++++A  +H
Sbjct: 696 GVWGTLLSACKVH 708



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 152/559 (27%), Positives = 275/559 (49%), Gaps = 15/559 (2%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           ++H L    G  S       LV+ Y+       A   F       D  LWNS++ ++  +
Sbjct: 33  RLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFS-ASPCPDTFLWNSLLRSHHCA 91

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG---QNLQV 195
                AL   R M+  G   + +T   A  A  + +   +G  +H+ +VK G    +  V
Sbjct: 92  SDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSV 151

Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL----YCKAMQFFRE 251
            V+++L+ MYARCG + +A  +  ++  +D V+W ++++G V+N       C  +Q  R 
Sbjct: 152 AVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRL 211

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
              +G +P+     + + A G LG L  G+ LH YA+K+G      + + L  MY+KC  
Sbjct: 212 AGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDM 271

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
                 +F ++T +D +SWT +I  Y +     +A+ELF+ ++  GL  D +++  VL  
Sbjct: 272 TEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSG 331

Query: 372 CSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
                 +++ K  H  IIR+   D V++ N+++ +YGK   +D +  VF  +  +D  SW
Sbjct: 332 LGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESW 391

Query: 431 TSMISSYVHNGLANEALELFYLM---NEANVESDSITLVSALSAASSLSILKKGKELNGF 487
           + M++ Y   GL  + LEL+  M   +      D  +LVSA+S+ S L  L+ G+ ++ +
Sbjct: 392 SLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCY 451

Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKV 546
            I+   + E S+ +SL+ MY RCG  ++A K+F   +  +D++ W ++I++    GR   
Sbjct: 452 SIKCLLD-ENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSND 510

Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
           A+ L+ +M  E   P+  T + ++ AC++   +  G+     ++ +  L+        LV
Sbjct: 511 ALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVK-NMGLESDVSISTALV 569

Query: 607 DLLGRANHLEEAYQFVRSM 625
           D+  +   L  A     SM
Sbjct: 570 DMYTKCGQLGTARGIFDSM 588


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/586 (37%), Positives = 338/586 (57%), Gaps = 37/586 (6%)

Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
           ++HA  +++G   +  +   L   YA    ++    VF      +  S++ II  + Q+ 
Sbjct: 65  QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124

Query: 342 CHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILN 400
              +A   +  +   G++ +     SVL +CS    +   K +H   I+ GL SDL +  
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRT 180

Query: 401 AIVDVYG-------------------------------KCGNIDYSRNVFESIESKDVVS 429
            +VDVY                                K G +D +R++FE ++ +DVV 
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           W  MI  Y  +G+ NE+L+LF  M  A    + +T+++ LSA   L  L+ G+ ++ +I 
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300

Query: 490 RKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAID 549
            KG  +   V ++L+DMY++CG+L+ A  VF+ ++ KD++ W SMI    +HG  + A+ 
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360

Query: 550 LFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLL 609
           LF +M      P  ITF+ +L AC H GL+ EG+ F  +MR  Y ++P  EHY C+V+LL
Sbjct: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420

Query: 610 GRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYV 669
           GRA HLEEAY  V++M I     +W  LLG CR+H N +LGE +AK L++    N G YV
Sbjct: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480

Query: 670 LISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYK 729
           L+SN++AA+  W+ V ++R  M+  G++K  G S IE+ NK+H F+A ++ H +S EIY 
Sbjct: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540

Query: 730 KLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRIT 789
            L EI   L+   GY  QT  VLH++ EE+K Q L  HSE+LAIA+G++ +  G+ ++I 
Sbjct: 541 MLNEINSWLKAR-GYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIV 599

Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           KNLRVC DCH+  K++S + GR++V+RD NRFHHFE G+CSCGDYW
Sbjct: 600 KNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 204/431 (47%), Gaps = 56/431 (12%)

Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
           F+E++R   + +    VA L            ++IHA+ ++ G      +   L   YA 
Sbjct: 44  FQEVERFASLIDKSKSVAHL------------LQIHASLLRRGLYHNPILNFKLQRSYAA 91

Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
            G++  +  V    +  +  S+++++   VQ+ L+ +A  ++ ++   G +P      NA
Sbjct: 92  LGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEP------NA 145

Query: 268 VSASGRLGN--LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK----------------- 308
            + S  L +  L +GK LH  AIK G  SDL +   L+D+YA+                 
Sbjct: 146 FTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPER 205

Query: 309 --------CCCVNYMGR------VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
                     C + MG       +F  M  +D + W  +I GYAQ+    ++L+LFR + 
Sbjct: 206 SLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRML 265

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNID 413
           +     + + + +VL AC  L  +   + IH YI  KG+  ++ +  A++D+Y KCG+++
Sbjct: 266 VAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLE 325

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +R VF+ I  KDVV+W SMI  Y  +G +  AL+LF  M E   +   IT +  LSA  
Sbjct: 326 DARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACG 385

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIA-NKVFNCVQTKDLIL 530
              ++++G+     ++R  + +E  +     +V++  R G L+ A   V N     D +L
Sbjct: 386 HGGLVEEGRSFFR-LMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVL 444

Query: 531 WTSMINANGLH 541
           W +++    LH
Sbjct: 445 WGTLLGCCRLH 455



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 161/352 (45%), Gaps = 42/352 (11%)

Query: 14  LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
           +F+   +  VF+++A++ ++V +    R    YS+M   G+  +AFTF  V+K+C+    
Sbjct: 101 VFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS---- 156

Query: 74  LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK----------- 122
           L+ G  +H   +K G  S  ++   LV +YA+  D   ARQLFD+M E+           
Sbjct: 157 LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTC 216

Query: 123 -------------------EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTF 163
                               DVV WN +I  Y+ SG   E+L LFR M     + N  T 
Sbjct: 217 YSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTV 276

Query: 164 VAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN 223
           +A L AC        G  IH+     G  + V+V  ALI MY++CG + +A  V  ++ +
Sbjct: 277 LAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRD 336

Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           KD V+WNSM+ G+  +     A+Q F E+   G KP  +  +  +SA G  G +  G+  
Sbjct: 337 KDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSF 396

Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
                    + D       ++ Y   C VN +GR  +   A   +   TI A
Sbjct: 397 FR------LMRDKYGIEPKIEHYG--CMVNLLGRAGHLEEAYGLVKNMTIAA 440



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 206/444 (46%), Gaps = 68/444 (15%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
           +IH  +L+ G      +   L   YA       +  +F+   E  +V  +++II ++  S
Sbjct: 65  QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEP-NVFSFSAIIHSHVQS 123

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
                A G + +M   G+  NA+TF + L++C   S E+ G  +H   +K G    +YV 
Sbjct: 124 RLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC---SLES-GKVLHCQAIKLGLGSDLYVR 179

Query: 199 NALIAMYARCG----------KMTE---------------------AAGVLYQLENKDSV 227
             L+ +YAR G          KM E                     A  +   ++ +D V
Sbjct: 180 TGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVV 239

Query: 228 SWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
            WN M+ G+ Q+ +  ++++ FR +  A   P++V  +  +SA G+LG L +G+ +H+Y 
Sbjct: 240 CWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYI 299

Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
             +G   ++ +G  L+DMY+KC  +     VF ++  +D ++W ++I GYA +     AL
Sbjct: 300 ENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHAL 359

Query: 348 ELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN------ 400
           +LF  +   G    D+  IG +L AC            HG ++ +G S   ++       
Sbjct: 360 QLFEEMTETGHKPTDITFIG-ILSACG-----------HGGLVEEGRSFFRLMRDKYGIE 407

Query: 401 -------AIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS---YVHNGLANEALEL 449
                   +V++ G+ G+++ +  + +++  + D V W +++     +V+  L  E  + 
Sbjct: 408 PKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAK- 466

Query: 450 FYLMNEANVESDSITLVSALSAAS 473
            +L+++    S +  L+S + AA+
Sbjct: 467 -FLVDQKLANSGTYVLLSNMYAAT 489



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 110/240 (45%), Gaps = 15/240 (6%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +  A  LF+ + +R V  WN M+G Y  +G P   L+ + RM V     +  T 
Sbjct: 217 YSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTV 276

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ AC  L  L+ G  IH  +   G      +  +L+ MY+KC     AR +FDR+ +
Sbjct: 277 LAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRD 336

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC-------EDSS 174
           K DVV WNS+I  Y+  G    AL LF EM   G      TF+  L AC       E  S
Sbjct: 337 K-DVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRS 395

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           F  L  +      K G   ++     ++ +  R G + EA G++  +    D V W ++L
Sbjct: 396 FFRLMRD------KYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 449



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 36/240 (15%)

Query: 376 KCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
           K ++   +IH  ++R+GL    ILN  +   Y   G +D S  VF + +  +V S++++I
Sbjct: 58  KSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAII 117

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
            S+V + L + A   +  M    VE ++ T  S L + S    L+ GK L+   I+ G  
Sbjct: 118 HSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLG 173

Query: 495 LEGSVASSLVDMYAR-------------------------------CGALDIANKVFNCV 523
            +  V + LVD+YAR                                G LD A  +F  +
Sbjct: 174 SDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGM 233

Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
           + +D++ W  MI      G    ++ LF +M      P+ +T LA+L AC   G +  G+
Sbjct: 234 KERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGR 293



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 1/133 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGS+ DA  +FD++  + V  WN+M+  Y  +G     L+ +  M   G      T
Sbjct: 317 MYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDIT 376

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVL-KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  ++ AC     ++ G     L+  K G +        +V +  +     +A  L   M
Sbjct: 377 FIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNM 436

Query: 120 GEKEDVVLWNSII 132
               D VLW +++
Sbjct: 437 TIAADPVLWGTLL 449


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 244/798 (30%), Positives = 401/798 (50%), Gaps = 113/798 (14%)

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
           R    + L+ N Y     L + +D +  +L   +HA  + SG   + +  N L+ MY + 
Sbjct: 2   RNALDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKS 61

Query: 209 GKMTEAAGVLYQLEN---------------------------------KDSVSWNSMLTG 235
             +  A  +  ++ N                                 +DSV +N+M+TG
Sbjct: 62  SNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITG 121

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR-LGNLLNGKELHAYAIKQGF-- 292
           +  N     A++ FR ++    +PD     + +SA    +GN     ++H   +K G   
Sbjct: 122 YAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGC 181

Query: 293 VSDLQIGNTLMDMYAK--------CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN--- 341
           VS   + N L+ +Y K        C  +    ++F +M  +D ++WTT+I GY +N+   
Sbjct: 182 VSS-SVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLN 240

Query: 342 ----------------------------CHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
                                       C  +AL L R ++  G+  D +   +++ AC+
Sbjct: 241 GAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACA 300

Query: 374 GLKCMSQTKEIHGYIIRKGLSD-----LVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            +      K++H YI++  L+      L + NA++ +Y K   +D +R +F ++  ++++
Sbjct: 301 NVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNII 360

Query: 429 SWTSMISSYVH-------------------------------NGLANEALELFYLMNEAN 457
           +W +++S YV+                               NG  +E L+LF  M    
Sbjct: 361 TWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDG 420

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
            E        AL+A S L  L+ G++L+  ++  G+    SV ++++ MYA+CG ++ A 
Sbjct: 421 FEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAE 480

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            VF  + + DL+ W SMI A G HG G  AI+LF +M  E   PD ITFL +L ACSH+G
Sbjct: 481 SVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAG 540

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L+ +G+ +   M   Y + P  +HYA +VDL  RA     A   + SM  +P A VW AL
Sbjct: 541 LVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEAL 600

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           L  CR+H N +LG   A++L +L P N G YVL+SN++A   +W +V +VR  MR   ++
Sbjct: 601 LAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVR 660

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K P  SWIE+ NK+H F+  D  H E   +Y+ L ++  ++++  GY+  T+FVLH++E 
Sbjct: 661 KEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKL-GYIPDTKFVLHDMEY 719

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           E+K   L  HSE+LA+ +G++K   G+ +R+ KN+R+C DCH+  K +S++  RE++VRD
Sbjct: 720 EQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRD 779

Query: 818 ANRFHHFEAGVCSCGDYW 835
             RFHHF+ G CSC DYW
Sbjct: 780 RKRFHHFKNGDCSCRDYW 797



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 240/518 (46%), Gaps = 84/518 (16%)

Query: 21  RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML--KDLDCGA 78
           R    +NAM+  Y  NG+    LE +  MR      D FTF  V+ A  +    +  CG 
Sbjct: 110 RDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCG- 168

Query: 79  KIHGLVLKCGYDS-TDFIVNSLVAMYAK--------CYDFRKARQLFDRMGEKEDVV--- 126
           ++H  V+K G    +  ++N+L+++Y K        C     AR+LFD M +++++    
Sbjct: 169 QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTT 228

Query: 127 ---------------------------LWNSIISAYSASGQCLEALGLFREMQRVGLVTN 159
                                       WN++IS Y   G   EAL L R+M+ +G+  +
Sbjct: 229 MITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFD 288

Query: 160 AYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQ----VYVANALIAMYARCGKMTEAA 215
             T+   + AC +     +G ++HA  +K+  N      + V+NALI +Y +  K+ EA 
Sbjct: 289 DITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEAR 348

Query: 216 GVLYQLENKDSVSWNSMLTGFV-------------------------------QNDLYCK 244
            + Y +  ++ ++WN++L+G+V                               QN    +
Sbjct: 349 KIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDE 408

Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
            ++ F++++  G +P       A++A   LG L NG++LHA  +  G+ S L +GN ++ 
Sbjct: 409 GLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMIS 468

Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
           MYAKC  V     VF  M + D +SW ++IA   Q+   +KA+ELF  +  EG+  D + 
Sbjct: 469 MYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRIT 528

Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILNA-IVDVYGKCGNIDYSRNVFESI 422
             +VL ACS    + + +     ++   G++      A +VD++ + G   Y+R V +S+
Sbjct: 529 FLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSM 588

Query: 423 ESKDVVS-WTSMISSYVHNG---LANEALE-LFYLMNE 455
            SK     W ++++    +G   L  EA E LF LM +
Sbjct: 589 PSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQ 626



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 156/359 (43%), Gaps = 51/359 (14%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A ++F+ + +     WNAM+  YV  G     L    +MR LGI  D  T+  +I ACA 
Sbjct: 242 AREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACAN 301

Query: 71  LKDLDCGAKIHGLVLKCGYDSTD----FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVV 126
           +     G ++H  +LK   +        + N+L+ +Y K     +AR++F  M  + +++
Sbjct: 302 VGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NII 360

Query: 127 LWNSIISAYSASGQCLEA-------------------------------LGLFREMQRVG 155
            WN+I+S Y  +G+  EA                               L LF++M+  G
Sbjct: 361 TWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDG 420

Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
                + F  AL AC        G ++HA  V  G    + V NA+I+MYA+CG +  A 
Sbjct: 421 FEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAE 480

Query: 216 GVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
            V   + + D VSWNSM+    Q+    KA++ F ++   G  PD++  +  ++A    G
Sbjct: 481 SVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAG 540

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTII 334
            +  G+  H +             N++++ Y    C ++  R+          S+  I+
Sbjct: 541 LVEKGR--HYF-------------NSMLESYGITPCEDHYARMVDLFCRAGMFSYARIV 584



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 25/247 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G + +A+  F+++  + + T   M+     NG     L+ + +MR+ G     F F
Sbjct: 369 YVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAF 428

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              + AC++L  L+ G ++H  ++  GY+S+  + N++++MYAKC     A  +F  M  
Sbjct: 429 AGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTM-P 487

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
             D+V WNS+I+A    G  ++A+ LF +M + G+  +  TF+  L AC           
Sbjct: 488 SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACS---------- 537

Query: 182 IHAATVKSGQN-----LQVYVANA-------LIAMYARCGKMTEAAGVLYQLENKDSVS- 228
            HA  V+ G++     L+ Y           ++ ++ R G  + A  V+  + +K     
Sbjct: 538 -HAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPV 596

Query: 229 WNSMLTG 235
           W ++L G
Sbjct: 597 WEALLAG 603



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 1/141 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG V  AE +F  +    + +WN+M+ A   +G  ++ +E + +M   G+  D  T
Sbjct: 469 MYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRIT 528

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC+    ++ G      +L+  G    +     +V ++ +   F  AR + D M
Sbjct: 529 FLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSM 588

Query: 120 GEKEDVVLWNSIISAYSASGQ 140
             K    +W ++++     G 
Sbjct: 589 PSKPGAPVWEALLAGCRIHGN 609


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 244/744 (32%), Positives = 395/744 (53%), Gaps = 63/744 (8%)

Query: 97  NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
           N+ +A  A+  +   AR  F+ M  +     +N++++ Y  +     ALGLFR M    L
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRT-TASYNALLAGYFRNRLPDAALGLFRRMPSRDL 79

Query: 157 VT-NAYTFVAAL--QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
            + NA     +L  Q   D++     +    + V     L+ YV + L+A         +
Sbjct: 80  ASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLA---------D 130

Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
           A  +  Q+  ++ VS+  +L G +      +A + F E+       D V     +S   +
Sbjct: 131 AIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR----DVVAWTAMLSGYCQ 186

Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
            G +   + L     K+  VS       ++  YA+   VN   ++F  M  ++ +SWT +
Sbjct: 187 AGRITEARALFDEMPKRNVVS----WTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAM 242

Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDA-DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           + GY Q      A ELF  +    + A + M++G                          
Sbjct: 243 LVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVG-------------------------- 276

Query: 393 LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
                        +G+ G +D ++ VFE +  +D  +W++MI +Y  N    EAL  F  
Sbjct: 277 -------------FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFRE 323

Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
           M    V  +  +++S L+  ++L++L  G+E++  ++R  F+++    S+L+ MY +CG 
Sbjct: 324 MLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGN 383

Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
           LD A +VF+  + KD+++W SMI     HG G+ A+ +F+ M     +PD IT++  L A
Sbjct: 384 LDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTA 443

Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
           CS++G + EG++    M  +  + P  EHY+C+VDLLGR+  +EEA+  +++M +EP A 
Sbjct: 444 CSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAV 503

Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
           +W AL+GACR+H N E+ E  AKKLLEL+PGN G YVL+S+++ +  +W+D  ++R  + 
Sbjct: 504 IWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFIS 563

Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDK-SHSESDEIYKKLAEITEKLEREGGYVAQTQFV 751
              L K+PG SWIE   ++H F + D  +H E   I + L ++ + L  E GY A   FV
Sbjct: 564 SRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKL-DGLLMESGYSADGSFV 622

Query: 752 LHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGR 811
           LH+++EE+K   L  HSER A+AYG+LK  EG  IR+ KNLRVC DCHS  KL++++  R
Sbjct: 623 LHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSR 682

Query: 812 ELVVRDANRFHHFEAGVCSCGDYW 835
           E+++RDANRFHHF+ G CSC DYW
Sbjct: 683 EIILRDANRFHHFKDGFCSCRDYW 706



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 31/293 (10%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLRVLETYSRMR 50
           Y + G + +A  LFD++ +R V +W AM+  Y  NGE           P R   +++ M 
Sbjct: 184 YCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML 243

Query: 51  VLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR 110
           V  I          ++  A L +    A     V  C         N+++  + +     
Sbjct: 244 VGYIQAGH------VEDAAELFN----AMPEHPVAAC---------NAMMVGFGQRGMVD 284

Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
            A+ +F++M E++D   W+++I AY  +   +EAL  FREM   G+  N  + ++ L  C
Sbjct: 285 AAKTVFEKMCERDDGT-WSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVC 343

Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
              +    G E+HAA ++   ++ V+  +ALI MY +CG + +A  V +  E KD V WN
Sbjct: 344 AALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWN 403

Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
           SM+TG+ Q+ L  +A+  F +++ AG  PD +  + A++A    G +  G+E+
Sbjct: 404 SMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREI 456



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 128/234 (54%), Gaps = 3/234 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           +G+ G V  A+ +F+K+ +R   TW+AM+ AY  N   +  L T+  M   G+  +  + 
Sbjct: 277 FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             ++  CA L  LD G ++H  +L+C +D   F V++L+ MY KC +  KA+++F    E
Sbjct: 337 ISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF-E 395

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
            +D+V+WNS+I+ Y+  G   +ALG+F +M+  G+  +  T++ AL AC  +     G E
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGRE 455

Query: 182 I-HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           I ++ TV S         + ++ +  R G + EA  ++  +    D+V W +++
Sbjct: 456 IFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 1/135 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A+++F     + +  WN+M+  Y  +G   + L  +  MR+ G+S D  T
Sbjct: 377 MYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGIT 436

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           +   + AC+    +  G +I + + +           + +V +  +     +A  L   M
Sbjct: 437 YIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNM 496

Query: 120 GEKEDVVLWNSIISA 134
             + D V+W +++ A
Sbjct: 497 PVEPDAVIWGALMGA 511


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/674 (32%), Positives = 386/674 (57%), Gaps = 9/674 (1%)

Query: 170 CEDSSFETLGMEIHAATV---KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           C D  +   G  +HA  +   ++  +  +   N+L+ +Y +CG++  A  +   +  ++ 
Sbjct: 22  CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK-PDQVCTVNAVSASGRLGNLLNGKELHA 285
           VSWN ++ G++    + + +  F+ +       P++     A+SA    G +  G + H 
Sbjct: 82  VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141

Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ---DFISWTTIIAGYAQNNC 342
              K G V    + + L+ MY++C  V    +V   +  +   D  S+ +++    ++  
Sbjct: 142 LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGR 201

Query: 343 HLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNA 401
             +A+E+ R +  E +  D +    V+  C+ ++ +     +H  ++R GL  D  + + 
Sbjct: 202 GEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSM 261

Query: 402 IVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESD 461
           ++D+YGKCG +  +RNVF+ +++++VV WT+++++Y+ NG   E+L LF  M+      +
Sbjct: 262 LIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPN 321

Query: 462 SITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
             T    L+A + ++ L+ G  L+  + + GF     V ++L++MY++ G++D +  VF 
Sbjct: 322 EYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFT 381

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  +D+I W +MI     HG GK A+ +F  M +    P+++TF+ +L A SH GL+ E
Sbjct: 382 DMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKE 441

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
           G  +L  +  +++++P  EHY C+V LL RA  L+EA  F+++ Q++     W  LL AC
Sbjct: 442 GFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNAC 501

Query: 642 RVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPG 701
            VH N +LG  +A+ +L++DP + G Y L+SN++A +R+W  V  +R  MR   +KK PG
Sbjct: 502 HVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPG 561

Query: 702 SSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
           +SW++I N IH F++   +H ES +IYKK+ ++   L +  GYV     VLH+VE+E+K 
Sbjct: 562 ASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLL-ALIKPLGYVPNIASVLHDVEDEQKE 620

Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
             L  HSE+LA+AYG++K    + IRI KNLR+C DCH+  KL+S++  R ++VRDANRF
Sbjct: 621 GYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRF 680

Query: 822 HHFEAGVCSCGDYW 835
           HHF  G C+C D+W
Sbjct: 681 HHFRDGSCTCLDHW 694



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 241/485 (49%), Gaps = 13/485 (2%)

Query: 68  CAMLKDLDCGAKIHGLVL---KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
           CA +K L  G  +H   L   +    S    +NSLV +Y KC     AR LFD M  + +
Sbjct: 22  CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLR-N 80

Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLGMEIH 183
           VV WN +++ Y   G  LE L LF+ M  +     N Y F  AL AC        GM+ H
Sbjct: 81  VVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCH 140

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK---DSVSWNSMLTGFVQND 240
               K G     YV +AL+ MY+RC  +  A  VL  +  +   D  S+NS+L   V++ 
Sbjct: 141 GLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESG 200

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++  R +       D V  V  +    ++ +L  G  +HA  ++ G + D  +G+
Sbjct: 201 RGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGS 260

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
            L+DMY KC  V     VF  +  ++ + WT ++  Y QN    ++L LF  +  EG   
Sbjct: 261 MLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLP 320

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVF 419
           +      +L AC+G+  +     +H  + + G  + VI+ NA++++Y K G+ID S NVF
Sbjct: 321 NEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVF 380

Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
             +  +D+++W +MI  Y H+GL  +AL++F  M  A    + +T +  LSA S L ++K
Sbjct: 381 TDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVK 440

Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
           +G      ++R  F +E  +   + +V + +R G LD A       Q K D++ W +++N
Sbjct: 441 EGFYYLNHLMRN-FKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLN 499

Query: 537 ANGLH 541
           A  +H
Sbjct: 500 ACHVH 504



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 225/450 (50%), Gaps = 15/450 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVL-GISVDAF 59
           +Y KCG +  A  LFD +  R V +WN ++  Y+  G  L VL  +  M  L     + +
Sbjct: 59  LYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEY 118

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
            F   + AC+    +  G + HGL+ K G     ++ ++LV MY++C     A Q+ D +
Sbjct: 119 VFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTV 178

Query: 120 -GEK-EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
            GE   D+  +NS+++A   SG+  EA+ + R M    +  +  T+V  +  C       
Sbjct: 179 PGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQ 238

Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           LG+ +HA  ++ G     +V + LI MY +CG++  A  V   L+N++ V W +++T ++
Sbjct: 239 LGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYL 298

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           QN  + +++  F  +   G  P++      ++A   +  L +G  LHA   K GF + + 
Sbjct: 299 QNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVI 358

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR-TVQLE 356
           + N L++MY+K   ++    VF  M  +D I+W  +I GY+ +    +AL++F+  V  E
Sbjct: 359 VRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAE 418

Query: 357 GLDADVMIIGSVLMACSGLKCMSQ-----TKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
                V  IG VL A S L  + +        +  + I  GL     + A++    + G 
Sbjct: 419 ECPNYVTFIG-VLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALL---SRAGL 474

Query: 412 IDYSRNVFESIESK-DVVSWTSMISS-YVH 439
           +D + N  ++ + K DVV+W +++++ +VH
Sbjct: 475 LDEAENFMKTTQVKWDVVAWRTLLNACHVH 504


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/561 (38%), Positives = 340/561 (60%), Gaps = 2/561 (0%)

Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
           +LL GK  H  AI  G V+D    N L+++Y KC   +    VF  M  +  +SW T+IA
Sbjct: 72  SLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIA 131

Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-S 394
           GY  +   ++AL+LF  +  EG       + S + AC+    +++ K++H   ++  L S
Sbjct: 132 GYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDS 191

Query: 395 DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN 454
           +  +  AI+DVY KC  I  +  VFE +  + +V+W+S+ + YV NGL  EAL LF    
Sbjct: 192 NSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQ 251

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
              VE    TL + LSA +SL++  +G +L+  I++ GF+    VA+SLVD+YARCG ++
Sbjct: 252 REGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIE 311

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            A  +F  ++ K++++W +MI +   H     A+ LF KM+     P+ +T+L++L  CS
Sbjct: 312 KAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCS 371

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           H+GL+ +G+ +  ++  D  ++P   HY+C+VD+LGR+   +EA++ +  M  EPTA +W
Sbjct: 372 HAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMW 431

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
            +LLG+CR ++N  L  I A++L +L+P N GN+VL+SNV+AAS  W++V   R  ++ S
Sbjct: 432 GSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDS 491

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
           G KK  G SWIE   K+H F+  ++ H    +IY KL EI  ++ R+       +  LH+
Sbjct: 492 GAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEM-RKFARRTSIECDLHD 550

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           V  E+K ++L  HSE+LA+++G++       I I KNLR+C DCHSF K+ + +  R ++
Sbjct: 551 VHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVI 610

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           VRD NRFHHF+ G CSCGD+W
Sbjct: 611 VRDTNRFHHFKDGSCSCGDFW 631



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 207/416 (49%), Gaps = 12/416 (2%)

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           LQ C       +G   H   +  G        N LI +Y +CG+   A  V   +  +  
Sbjct: 64  LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           VSWN+M+ G+  +    +A++ F  +   G    +    + + A      +   K+LH  
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
           A+K    S+  +G  ++D+YAKC  +     VF +M  +  ++W+++ AGY QN  H +A
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDV 405
           L LFR  Q EG++     + ++L AC+ L    +  ++H  I++ G   +  +  ++VDV
Sbjct: 244 LHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDV 303

Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
           Y +CG I+ +  +F  +E K+VV W +MI+S+  +  + EA+ LF  M +  +  + +T 
Sbjct: 304 YARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTY 363

Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCV 523
           +S LS  S   +++KG+     ++     +E +V   S +VD+  R G  D A ++ N +
Sbjct: 364 LSVLSVCSHAGLVEKGRHYFSLLMSDR-TVEPNVLHYSCMVDVLGRSGKTDEAWELLNKM 422

Query: 524 QTKDLI-LWTSMI----NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
             +    +W S++    N N +    ++A +  +++E ++   +H+  L+ +YA S
Sbjct: 423 PFEPTASMWGSLLGSCRNYNNIR-LARIAAEQLFQLEPDN-GGNHV-LLSNVYAAS 475



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 172/317 (54%), Gaps = 9/317 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG    A  +FD +  R++ +WN M+  Y  +GE ++ L+ +SRM   G  +  FT
Sbjct: 101 LYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFT 160

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               I ACA    ++   ++H + LK   DS  F+  +++ +YAKC   + A  +F++M 
Sbjct: 161 LSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMP 220

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+  +V W+S+ + Y  +G   EAL LFR  QR G+    +T  A L AC   + +  G+
Sbjct: 221 ER-TLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGI 279

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  +K G +   +VA +L+ +YARCG++ +A  +   +E+K+ V WN+M+  F ++ 
Sbjct: 280 QLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHA 339

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +AM  F ++Q  G  P++V  ++ +S     G +  G+  H +++    +SD  +  
Sbjct: 340 HSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGR--HYFSL---LMSDRTVEP 394

Query: 301 TLMDMYAKCCCVNYMGR 317
            ++      C V+ +GR
Sbjct: 395 NVLHY---SCMVDVLGR 408



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 204/424 (48%), Gaps = 9/424 (2%)

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
           +D       ++ CA  K L  G   HGL +  G  +     N L+ +Y KC     AR +
Sbjct: 55  IDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLV 114

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
           FD M  +  +V WN++I+ Y+ SG+ ++AL LF  M R G   + +T  + + AC     
Sbjct: 115 FDIMHVR-SIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYA 173

Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
                ++H   +K   +   +V  A++ +YA+C  + +A  V  ++  +  V+W+S+  G
Sbjct: 174 INECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAG 233

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
           +VQN L+ +A+  FR  Q  G +  +      +SA   L   + G +LHA  +K GF  +
Sbjct: 234 YVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGN 293

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             +  +L+D+YA+C  +     +F  M  ++ + W  +IA ++++    +A+ LF  +Q 
Sbjct: 294 FFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQ 353

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVILNAIVDVYGKCGNID 413
            G+  + +   SVL  CS    + + +     ++  R    +++  + +VDV G+ G  D
Sbjct: 354 LGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTD 413

Query: 414 YSRNVFESIESKDVVS-WTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSAL 469
            +  +   +  +   S W S++ S   Y +  LA  A E  + +   N    +  L+S +
Sbjct: 414 EAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDN--GGNHVLLSNV 471

Query: 470 SAAS 473
            AAS
Sbjct: 472 YAAS 475



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 6/178 (3%)

Query: 466 VSALSAASSLSILKK----GKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN 521
           VSA+S    L   +K    GK  +G  I  G   +    + L+++Y +CG  D A  VF+
Sbjct: 57  VSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFD 116

Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
            +  + ++ W +MI      G    A+ LF +M  E       T  + + AC+    INE
Sbjct: 117 IMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINE 176

Query: 582 GKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLG 639
            K+ L  +     LD        ++D+  + N +++A      M  E T   W +L  
Sbjct: 177 CKQ-LHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMP-ERTLVTWSSLFA 232


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/663 (33%), Positives = 373/663 (56%), Gaps = 3/663 (0%)

Query: 80  IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
           +H  +L  G      +  SL+ +Y  C D   AR +F+    + DV +WNS++S YS + 
Sbjct: 26  VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85

Query: 140 QCLEALGLFREMQRVGL-VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
              + L +F+ +    + V +++TF   ++A      E LG  IH   VKSG    V VA
Sbjct: 86  MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           ++L+ MYA+      +  V  ++  +D  SWN++++ F Q+    KA++ F  ++ +G +
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           P+ V    A+SA  RL  L  GKE+H   +K+GF  D  + + L+DMY KC C+     V
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
           F +M  +  ++W ++I GY         +E+   + +EG       + S+LMACS  + +
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325

Query: 379 SQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
              K IHGY+IR  + +D+ +  +++D+Y KCG  + +  VF   +     SW  MISSY
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSY 385

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           +  G   +A+E++  M    V+ D +T  S L A S L+ L+KGK+++  I       + 
Sbjct: 386 ISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDE 445

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
            + S+L+DMY++CG    A ++FN +  KD++ WT MI+A G HG+ + A+  F +M+  
Sbjct: 446 LLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKF 505

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
              PD +T LA+L AC H+GLI+EG KF   MR  Y ++P  EHY+C++D+LGRA  L E
Sbjct: 506 GLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLE 565

Query: 618 AYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           AY+ + ++ +    AE+   L  AC +H    LG+ +A+ L+E  P +   Y+++ N++A
Sbjct: 566 AYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYA 625

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
           +   W    +VR++M+  GL+K PG SWIE+ +K+  F A D+SH  ++ +Y+ LA ++ 
Sbjct: 626 SGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSG 685

Query: 737 KLE 739
            +E
Sbjct: 686 HME 688



 Score =  282 bits (721), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 192/585 (32%), Positives = 297/585 (50%), Gaps = 12/585 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRT-VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DA 58
           +Y  C     A  +F+    R+ V+ WN+++  Y  N      LE + R+    I V D+
Sbjct: 48  VYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDS 107

Query: 59  FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
           FTFP VIKA   L     G  IH LV+K GY     + +SLV MYAK   F  + Q+FD 
Sbjct: 108 FTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDE 167

Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
           M E+ DV  WN++IS +  SG+  +AL LF  M+  G   N+ +   A+ AC    +   
Sbjct: 168 MPER-DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLER 226

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G EIH   VK G  L  YV +AL+ MY +C  +  A  V  ++  K  V+WNSM+ G+V 
Sbjct: 227 GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVA 286

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                  ++    +   G +P Q    + + A  R  NLL+GK +H Y I+    +D+ +
Sbjct: 287 KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYV 346

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
             +L+D+Y KC   N    VF +       SW  +I+ Y       KA+E++  +   G+
Sbjct: 347 NCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGV 406

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRN 417
             DV+   SVL ACS L  + + K+IH  I    L +D ++L+A++D+Y KCGN   +  
Sbjct: 407 KPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFR 466

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F SI  KDVVSWT MIS+Y  +G   EAL  F  M +  ++ D +TL++ LSA     +
Sbjct: 467 IFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGL 526

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVF-NCVQTKD-LILWTS 533
           + +G +     +R  + +E  +   S ++D+  R G L  A ++     +T D   L ++
Sbjct: 527 IDEGLKFFS-QMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLST 585

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL--LYACSHS 576
           + +A  LH    +  D   ++  E++  D  T++ L  LYA   S
Sbjct: 586 LFSACCLHLEHSLG-DRIARLLVENYPDDASTYMVLFNLYASGES 629


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 240/684 (35%), Positives = 390/684 (57%), Gaps = 11/684 (1%)

Query: 68  CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVL 127
           C   K L  G  +H  +L  G  S+  I NSL+ +YAKC  F KA  +FD +  K DVV 
Sbjct: 20  CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNK-DVVS 78

Query: 128 WNSIISAYS---ASGQCLEALGLFRE--MQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
           WN +I+A+S   A    L  + LFR+  M    +V NA+T      A    S    G + 
Sbjct: 79  WNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQA 138

Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
           HA  VK+  +  V+ A++L+ MY + G + EA  +  ++  +++VSW +M++G+   +L 
Sbjct: 139 HALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELA 198

Query: 243 CKAMQFFREL--QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
            +A + F+ +  +  G+  ++    + +SA      +  G+++H+ A+K G V  + + N
Sbjct: 199 DEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVAN 258

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LD 359
            L+ MY KC  +    + F     ++ I+W+ ++ G+AQ     KAL+LF  +   G L 
Sbjct: 259 ALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELP 318

Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
           ++  ++G V+ ACS    + + +++HGY ++ G    L +L+A+VD+Y KCG+I  +R  
Sbjct: 319 SEFTLVG-VINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKG 377

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           FE I+  DVV WTS+I+ YV NG    AL L+  M    V  + +T+ S L A S+L+ L
Sbjct: 378 FECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAAL 437

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            +GK+++  II+  F+LE  + S+L  MYA+CG+LD   ++F  +  +D+I W +MI+  
Sbjct: 438 DQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGL 497

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
             +GRG   ++LF KM  E   PD++TF+ LL ACSH GL++ G  + ++M  ++ + P 
Sbjct: 498 SQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPT 557

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHYAC+VD+L RA  L EA +F+ S  ++    +W  LL A + H + +LG    +KL+
Sbjct: 558 VEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLM 617

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           EL       YVL+S+++ A  KW+DVE+VR  M+  G+ K PG SWIE+ +  H F+  D
Sbjct: 618 ELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVGD 677

Query: 719 KSHSESDEIYKKLAEITEKLEREG 742
             H + DEI   L  +T+ ++ EG
Sbjct: 678 NMHPQIDEIRLGLKLLTKLMKDEG 701



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 286/552 (51%), Gaps = 13/552 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYV---SNGEPLRVLETYSR--MRVLGIS 55
           +Y KC     A  +FD ++ + V +WN ++ A+    ++   L V+  + +  M    I 
Sbjct: 54  LYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIV 113

Query: 56  VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
            +A T   V  A + L D   G + H L +K       F  +SL+ MY K     +AR L
Sbjct: 114 PNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDL 173

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM--QRVGLVTNAYTFVAALQACEDS 173
           FD M E+ + V W ++IS Y++     EA  LF+ M  +  G   N + F + L A    
Sbjct: 174 FDEMPER-NAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCY 232

Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
                G ++H+  +K+G    V VANAL+ MY +CG + +A        NK+S++W++M+
Sbjct: 233 MLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMV 292

Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
           TGF Q     KA++ F ++  +G+ P +   V  ++A      ++ G+++H Y++K G+ 
Sbjct: 293 TGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYE 352

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
             L + + L+DMYAKC  +    + F  +   D + WT+II GY QN  +  AL L+  +
Sbjct: 353 LQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKM 412

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
           QL G+  + + + SVL ACS L  + Q K++H  II+   S ++ I +A+  +Y KCG++
Sbjct: 413 QLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSL 472

Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
           D    +F  + ++DV+SW +MIS    NG  NE LELF  M     + D++T V+ LSA 
Sbjct: 473 DDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSAC 532

Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-LI 529
           S + ++ +G      +  + FN+  +V   + +VD+ +R G L  A +          L 
Sbjct: 533 SHMGLVDRGWVYFKMMFDE-FNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLC 591

Query: 530 LWTSMINANGLH 541
           LW  ++ A+  H
Sbjct: 592 LWRILLAASKNH 603


>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
 gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/659 (35%), Positives = 361/659 (54%), Gaps = 42/659 (6%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           +IHA  +K G     ++A  L+   A      +  A  +     N D    N+++ G  +
Sbjct: 23  QIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLIRGLYE 82

Query: 239 NDLYCKAMQFFRELQ-GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           +D    ++  F E++  +   PD       V A+  L ++  G +LH  A+  G  + L 
Sbjct: 83  SDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLF 142

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           +G TL+ MY +C  V +  +VF +M   + I+W  ++    +        ELF       
Sbjct: 143 VGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELF------- 195

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
              D+M +                             +L+  N ++  Y K G ++ +R 
Sbjct: 196 ---DLMPV----------------------------RNLMSWNVMLAGYTKAGELELARE 224

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           +F  +  KD VSW++MI  + HNG   EA   F  +    +  +  +L   LSA +    
Sbjct: 225 MFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGA 284

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMIN 536
           L+ GK L+GFI + G     SV ++L+D Y++CG + +A  VF  +   ++++ WTSM+ 
Sbjct: 285 LEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMA 344

Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
           A  +HG G+ AI +F+KME     PD I F++LLYACSH+GL+ +G ++ + M+  Y ++
Sbjct: 345 ALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIE 404

Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
           P  EHY C+VDL GRA  L++AY+FV  M I  TA +W  LLGAC +H + +L E V ++
Sbjct: 405 PSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKER 464

Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
           L ELDP N  ++VL+SN +A + KWKD   VR  M    + KTPG S IE+   +++F+A
Sbjct: 465 LSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLA 524

Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYG 776
             K +  ++E YKKL EI  +L  EGGYV +   VLH++EEEEK   +  HSE+LA+A+G
Sbjct: 525 GTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFG 584

Query: 777 VLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           + +  +G  IRI KNLR+C DCH+  KL+S+++  E+VVRD +RFH F+ G CSC DYW
Sbjct: 585 IARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 240/500 (48%), Gaps = 57/500 (11%)

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA----KCYDFRKARQL 115
           T P  +    + K L    +IH  VLK G +S  FI   L+   A       D+  A +L
Sbjct: 4   TEPLCLSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDY--ACRL 61

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL-VTNAYTFVAALQACEDSS 174
           F R     DV + N++I     S +  ++L  F EM+R      ++++F   ++A  +  
Sbjct: 62  F-RYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLR 120

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
              +G+++H   +  G +  ++V   LI+MY  CG +  A  V  ++   ++++WN+M+T
Sbjct: 121 SVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVT 180

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
                                              A  R G++  G+EL         V 
Sbjct: 181 -----------------------------------ACCRGGDMKGGRELFDLMP----VR 201

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           +L   N ++  Y K   +     +F +M  +D +SW+T+I G+A N    +A   FR +Q
Sbjct: 202 NLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQ 261

Query: 355 LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNID 413
            +G+  +   +  VL AC+    +   K +HG+I + GL+ +V + NA++D Y KCGN+ 
Sbjct: 262 RKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVL 321

Query: 414 YSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
            ++ VFE I   +++VSWTSM+++   +G   EA+ +F+ M E+ +  D I  +S L A 
Sbjct: 322 MAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYAC 381

Query: 473 SSLSILKKGKELNGFIIRKG-FNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD-- 527
           S   ++++G E   F   KG +N+E S+     +VD+Y R G L  A + F C       
Sbjct: 382 SHAGLVEQGCEY--FDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYE-FVCQMPIPCT 438

Query: 528 LILWTSMINANGLHGRGKVA 547
            I+W +++ A  +HG  K+A
Sbjct: 439 AIIWRTLLGACSMHGDVKLA 458



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 213/473 (45%), Gaps = 59/473 (12%)

Query: 13  QLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV-DAFTFPCVIKACAML 71
           +LF       VF  N ++     +  P   L  +  MR    S  D+F+F  ++KA A L
Sbjct: 60  RLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANL 119

Query: 72  KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
           + +  G ++H   L  G D+  F+  +L++MY +C     AR++FD M E  + + WN++
Sbjct: 120 RSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEP-NAIAWNAM 178

Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
           ++A    G       LF  M     V N  ++                            
Sbjct: 179 VTACCRGGDMKGGRELFDLMP----VRNLMSW---------------------------- 206

Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
                  N ++A Y + G++  A  +  ++  KD VSW++M+ GF  N  + +A  FFRE
Sbjct: 207 -------NVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRE 259

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           LQ  G +P++      +SA  + G L  GK LH +  K G    + + N L+D Y+KC  
Sbjct: 260 LQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGN 319

Query: 312 VNYMGRVFYQ-MTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
           V     VF + M  ++ +SWT+++A  A +    +A+ +F  ++  G+  D +   S+L 
Sbjct: 320 VLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLY 379

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLSDLVI----LNAIVDVYGKCGNIDYSRNVFESIESKD 426
           ACS    + Q  E    +  KG+ ++         +VD+YG+ G +   +  +E +    
Sbjct: 380 ACSHAGLVEQGCEYFDKM--KGMYNIEPSIEHYGCMVDLYGRAGQL---QKAYEFVCQMP 434

Query: 427 V----VSWTSMISSYVHNG---LANEALELFYLMNEANVESDSITLVSALSAA 472
           +    + W +++ +   +G   LA +  E    ++  N  SD + L +A + A
Sbjct: 435 IPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNN-SSDHVLLSNAYAVA 486



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 117/235 (49%), Gaps = 4/235 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G +  A ++F ++  +   +W+ M+  +  NG        +  ++  G+  +  + 
Sbjct: 213 YTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSL 272

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ ACA    L+ G  +HG + K G      + N+L+  Y+KC +   A+ +F+R+  
Sbjct: 273 TGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMN 332

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           + ++V W S+++A +  G   EA+G+F +M+  G+  +   F++ L AC  +     G E
Sbjct: 333 ERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCE 392

Query: 182 IHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSML 233
            +   +K   N++  + +   ++ +Y R G++ +A   + Q+     ++ W ++L
Sbjct: 393 -YFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLL 446



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 127/287 (44%), Gaps = 20/287 (6%)

Query: 376 KCMSQTKEIHGYIIRKGL-SDLVILNAIVD--VYGKCGNIDYSRNVFESIESKDVVSWTS 432
           K ++  K+IH  +++ GL SD  I   ++         ++DY+  +F    + DV    +
Sbjct: 16  KSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNT 75

Query: 433 MISSYVHNGLANEALELFYLMNEANV-ESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
           +I     +    ++L  F  M   +    DS +    + AA++L  ++ G +L+   +  
Sbjct: 76  LIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVH 135

Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
           G +    V ++L+ MY  CG +  A KVF+ +   + I W +M+ A    G  K   +LF
Sbjct: 136 GLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELF 195

Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKK-FLEI-MRCDYQLDPWPEHYACLVDLL 609
             M   +     +++  +L   + +G +   ++ FLE+ M+ D         ++ ++   
Sbjct: 196 DLMPVRNL----MSWNVMLAGYTKAGELELAREMFLEMPMKDDVS-------WSTMIVGF 244

Query: 610 GRANHLEEAYQFVRSMQ---IEPTAEVWCALLGACRVHSNKELGEIV 653
               + EEA+ F R +Q   + P       +L AC      E G+I+
Sbjct: 245 AHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKIL 291


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/581 (37%), Positives = 337/581 (58%), Gaps = 3/581 (0%)

Query: 257  QKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
              P  +    A+ ++ RL + L  G++LHA ++K    ++  +  +L+ +YAKC  ++  
Sbjct: 521  PNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRA 580

Query: 316  GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
             RVF +M     + WT +I  Y       +A+ + R     G+  D      VL AC+ +
Sbjct: 581  QRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARI 640

Query: 376  KCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
              ++  + +     ++G++  V +  A VD+Y KCG +  +R VF+ +  KD V+W +M+
Sbjct: 641  ADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMV 700

Query: 435  SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
              Y  NG   EAL+LF  M    ++ D   +  ALSA + L  L  G++    +    F 
Sbjct: 701  GGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFL 760

Query: 495  LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
                + ++L+DMYA+CG+   A  VF  ++ KD+I+W +MI   G+ G  K+A  L  +M
Sbjct: 761  DNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQM 820

Query: 555  EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
            E      +  TF+ LL +C+H+GLI +G+++   M   Y + P  EHY C+VDLL RA  
Sbjct: 821  EKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGL 880

Query: 615  LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNV 674
            L+EA+Q V  M +   A +  ALLG C++H N EL E V K+L+ L+P N GNYV++SN+
Sbjct: 881  LQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNI 940

Query: 675  FAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
            ++   +W+D  ++R+ M+  G++K P  SW+E   K+H F   DKSH  SD+IYKKL E+
Sbjct: 941  YSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDEL 1000

Query: 735  TEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRV 794
              ++ +  GY   T+ V+ +VE+EEK   L  HSE+LAIA+ +L +  G  IR+TKNLRV
Sbjct: 1001 GLEM-KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRV 1059

Query: 795  CVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            C DCH+  KLVSR+  RE++VRD NRFH F  G CSC DYW
Sbjct: 1060 CSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 2/327 (0%)

Query: 48  RMRVLGISVDAFTFPCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC 106
           R+  L  +    T P  +K+ + L   L  G ++H   LK    +   ++ SL+++YAKC
Sbjct: 515 RVHCLLPNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKC 574

Query: 107 YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
               +A+++FD M      V W ++I+AY  +G   EA+ + R     G+  +++T V  
Sbjct: 575 GLLHRAQRVFDEM-PHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRV 633

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L AC   +    G  +  A  + G    V+VA A + +Y +CG+M +A  V  ++ +KD+
Sbjct: 634 LTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDA 693

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           V+W +M+ G+  N    +A+  F  +Q  G KPD      A+SA  RLG L  G++    
Sbjct: 694 VAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRM 753

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
                F+ +  +G  L+DMYAKC        VF QM  +D I W  +I G         A
Sbjct: 754 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIA 813

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACS 373
             L   ++  G+  +      +L +C+
Sbjct: 814 FALVGQMEKSGVKLNDNTFIGLLCSCT 840



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 171/346 (49%), Gaps = 4/346 (1%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++HA ++K   +   +V  +L+++YA+CG +  A  V  ++ +  +V W +++T ++ 
Sbjct: 545 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 604

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                +A+   R     G +PD    V  ++A  R+ +L  G+ +   A ++G    + +
Sbjct: 605 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 664

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
               +D+Y KC  +     VF +M  +D ++W  ++ GYA N    +AL+LF  +Q EG+
Sbjct: 665 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 724

Query: 359 DADVMIIGSVLMACSGLKCMSQTKE-IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
             D   +   L AC+ L  +   ++ I      + L + V+  A++D+Y KCG+   +  
Sbjct: 725 KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 784

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ +  KD++ W +MI      G    A  L   M ++ V+ +  T +  L + +   +
Sbjct: 785 VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGL 844

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFN 521
           ++ G+     +  K +++   +     +VD+ +R G L  A+++ +
Sbjct: 845 IQDGRRYFHNMT-KLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVD 889



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  A+++FD++   +   W A++ AY+  G+    +         G+  D+FT
Sbjct: 570 LYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFT 629

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA + DL  G  +     + G   + F+  + V +Y KC +  KAR++FD+M 
Sbjct: 630 AVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMR 689

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V W +++  Y+++G   EAL LF  MQ  G+  + Y    AL AC       LG 
Sbjct: 690 HK-DAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGR 748

Query: 181 EIHAATVKSGQNLQVYV-ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +     V   + L   V   ALI MYA+CG   EA  V  Q+  KD + WN+M+ G 
Sbjct: 749 QA-IRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL 804


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/579 (37%), Positives = 337/579 (58%), Gaps = 3/579 (0%)

Query: 259 PDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
           P  +    A+ ++ RL + L  G++LHA ++K    ++  +  +L+ +YAKC  ++   R
Sbjct: 68  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127

Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
           VF +M     + WT +I  Y       +A+ + R     G+  D      VL AC+ +  
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187

Query: 378 MSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
           ++  + +     ++G++  V +  A VD+Y KCG +  +R VF+ +  KD V+W +M+  
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247

Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
           Y  NG   EAL+LF  M    ++ D   +  ALSA + L  L  G++    +    F   
Sbjct: 248 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 307

Query: 497 GSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
             + ++L+DMYA+CG+   A  VF  ++ KD+I+W +MI   G+ G  K+A  L  +ME 
Sbjct: 308 PVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEK 367

Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLE 616
                +  TF+ LL +C+H+GLI +G+++   M   Y + P  EHY C+VDLL RA  L+
Sbjct: 368 SGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQ 427

Query: 617 EAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFA 676
           EA+Q V  M +   A +  ALLG C++H N EL E V K+L+ L+P N GNYV++SN+++
Sbjct: 428 EAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYS 487

Query: 677 ASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITE 736
              +W+D  ++R+ M+  G++K P  SW+E   K+H F   DKSH  SD+IYKKL E+  
Sbjct: 488 NRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGL 547

Query: 737 KLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCV 796
           ++ +  GY   T+ V+ +VE+EEK   L  HSE+LAIA+ +L +  G  IR+TKNLRVC 
Sbjct: 548 EM-KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCS 606

Query: 797 DCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           DCH+  KLVSR+  RE++VRD NRFH F  G CSC DYW
Sbjct: 607 DCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 2/327 (0%)

Query: 48  RMRVLGISVDAFTFPCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC 106
           R+  L  +    T P  +K+ + L   L  G ++H   LK    +   ++ SL+++YAKC
Sbjct: 60  RVHCLLPNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKC 119

Query: 107 YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
               +A+++FD M      V W ++I+AY  +G   EA+ + R     G+  +++T V  
Sbjct: 120 GLLHRAQRVFDEM-PHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRV 178

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L AC   +    G  +  A  + G    V+VA A + +Y +CG+M +A  V  ++ +KD+
Sbjct: 179 LTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDA 238

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           V+W +M+ G+  N    +A+  F  +Q  G KPD      A+SA  RLG L  G++    
Sbjct: 239 VAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRM 298

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
                F+ +  +G  L+DMYAKC        VF QM  +D I W  +I G         A
Sbjct: 299 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIA 358

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACS 373
             L   ++  G+  +      +L +C+
Sbjct: 359 FALVGQMEKSGVKLNDNTFIGLLCSCT 385



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 171/346 (49%), Gaps = 4/346 (1%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++HA ++K   +   +V  +L+++YA+CG +  A  V  ++ +  +V W +++T ++ 
Sbjct: 90  GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 149

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                +A+   R     G +PD    V  ++A  R+ +L  G+ +   A ++G    + +
Sbjct: 150 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 209

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
               +D+Y KC  +     VF +M  +D ++W  ++ GYA N    +AL+LF  +Q EG+
Sbjct: 210 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 269

Query: 359 DADVMIIGSVLMACSGLKCMSQTKE-IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
             D   +   L AC+ L  +   ++ I      + L + V+  A++D+Y KCG+   +  
Sbjct: 270 KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 329

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ +  KD++ W +MI      G    A  L   M ++ V+ +  T +  L + +   +
Sbjct: 330 VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGL 389

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFN 521
           ++ G+     +  K +++   +     +VD+ +R G L  A+++ +
Sbjct: 390 IQDGRRYFHNMT-KLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVD 434



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  A+++FD++   +   W A++ AY+  G+    +         G+  D+FT
Sbjct: 115 LYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFT 174

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA + DL  G  +     + G   + F+  + V +Y KC +  KAR++FD+M 
Sbjct: 175 AVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMR 234

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V W +++  Y+++G   EAL LF  MQ  G+  + Y    AL AC       LG 
Sbjct: 235 HK-DAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGR 293

Query: 181 EIHAATVKSGQNLQVYV-ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +     V   + L   V   ALI MYA+CG   EA  V  Q+  KD + WN+M+ G 
Sbjct: 294 QA-IRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL 349


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/657 (35%), Positives = 375/657 (57%), Gaps = 10/657 (1%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           ++HA ++K+       V++ L+A+YA  R   +  A  +   ++    VSWN ++  +++
Sbjct: 33  QLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIE 92

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N     A+  F +L      PD       +    RLG L  GK++H   +K GF  D  +
Sbjct: 93  NQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFV 151

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            ++L+ MY+KC  +    +VF +M  +D +SW ++I GYA+      ALE+F  +  +  
Sbjct: 152 LSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDS 211

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNV 418
            +  ++I        GL    + +       R  + + V  NA+++ Y K G+ + ++ +
Sbjct: 212 FSWTILI-------DGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKEL 264

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  + +V+W SMI+ Y  N    +AL+LF +M   ++  +  T++ A+SAAS +  L
Sbjct: 265 FDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSL 324

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
             G+ ++ +I++ GF  +G + + L++MY++CG++  A +VF  +  K L  WTS+I   
Sbjct: 325 GTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGL 384

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
           G+HG  +  ++LF +M      P  ITF+ +L ACSH+G   +  ++ ++M  DY + P 
Sbjct: 385 GMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPS 444

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY CL+D+L RA HLEEA   +  M I+    +W +LL   R H N  +GE  A+ L+
Sbjct: 445 IEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLI 504

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           +L P   G YV++SN++AA+  W+ V QVR  M+  G+KK PG S IE    IH FI  D
Sbjct: 505 DLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGD 564

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
           KSH +++EIY KL E+ +KL   G     TQ +L   E+ EK   L  HSERLAIA+G+L
Sbjct: 565 KSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLL 624

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
               GS IRI KNLR+C DCH+  KL+S ++ RE+++RD +RFHHF++G CSC D+W
Sbjct: 625 NIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 236/473 (49%), Gaps = 22/473 (4%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  LFD + + T+ +WN ++  Y+ N      +  + ++ +     D+FT PCV+K CA 
Sbjct: 68  AHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCAR 126

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L  L  G +IHGLVLK G+    F+++SLV+MY+KC +    R++FDRM E +DVV WNS
Sbjct: 127 LGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRM-EDKDVVSWNS 185

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I  Y+  G+   AL +F EM       +++++   +     S     G    A  V   
Sbjct: 186 LIDGYARCGEIELALEMFEEMPE----KDSFSWTILIDGLSKS-----GKLEAARDVFDR 236

Query: 191 QNLQVYVA-NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
             ++  V+ NA+I  Y + G    A  +  Q+  +  V+WNSM+TG+ +N  + KA++ F
Sbjct: 237 MPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLF 296

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
             +      P+    + AVSA+  + +L  G+ +H+Y +K GF +D  +G  L++MY+KC
Sbjct: 297 EVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKC 356

Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
             V    RVF  +  +    WT++I G   +    + LELF  +   GL    +    VL
Sbjct: 357 GSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVL 416

Query: 370 MACSGLKCMSQTKE-----IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIES 424
            ACS                + Y I+  +        ++DV  + G+++ +++  E +  
Sbjct: 417 NACSHAGFAEDAHRYFKMMTYDYGIKPSIEH---YGCLIDVLCRAGHLEEAKDTIERMPI 473

Query: 425 K-DVVSWTSMIS-SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
           K + V WTS++S S  H  +        +L++ A   +    ++S + AA+ L
Sbjct: 474 KANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGL 526



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 153/312 (49%), Gaps = 16/312 (5%)

Query: 275 GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA--KCCCVNYMGRVFYQMTAQDFISWTT 332
           G      +LHA +IK   ++   + + L+ +YA  +   + Y   +F  +     +SW  
Sbjct: 26  GTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNL 85

Query: 333 IIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           +I  Y +N     A+ LF  + L     D   +  VL  C+ L  + + K+IHG +++ G
Sbjct: 86  LIKCYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIG 144

Query: 393 LS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
              D  +L+++V +Y KCG I+  R VF+ +E KDVVSW S+I  Y   G    ALE+F 
Sbjct: 145 FGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFE 204

Query: 452 LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA-SSLVDMYARC 510
            M E +  S +I L+  LS +  L   +         +     +  SV+ +++++ Y + 
Sbjct: 205 EMPEKDSFSWTI-LIDGLSKSGKLEAARD--------VFDRMPIRNSVSWNAMINGYMKA 255

Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
           G  + A ++F+ +  + L+ W SMI     + +   A+ LF  M  E  +P++ T L  +
Sbjct: 256 GDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAV 315

Query: 571 YACSHSGLINEG 582
            A   SG+++ G
Sbjct: 316 SAA--SGMVSLG 325



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 9/275 (3%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +    ++FD++  + V +WN+++  Y   GE    LE +  M       D+F+
Sbjct: 158 MYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMP----EKDSFS 213

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +I   +    L+    +   +      S + ++N     Y K  D   A++LFD+M 
Sbjct: 214 WTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMING----YMKAGDSNTAKELFDQMP 269

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           E+  +V WNS+I+ Y  + Q  +AL LF  M R  +  N  T + A+ A         G 
Sbjct: 270 ER-SLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGR 328

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H+  VKSG      +   LI MY++CG +  A  V   +  K    W S++ G   + 
Sbjct: 329 WVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHG 388

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
           L  + ++ F E+   G KP  +  +  ++A    G
Sbjct: 389 LVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAG 423



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 3/236 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G    A++LFD++ +R++ TWN+M+  Y  N +  + L+ +  M    IS +  T 
Sbjct: 252 YMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTI 311

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
              + A + +  L  G  +H  ++K G+ +   +   L+ MY+KC   + A ++F R   
Sbjct: 312 LGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVF-RSIP 370

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF-ETLGM 180
           K+ +  W S+I      G   + L LF EM R GL  +A TF+  L AC  + F E    
Sbjct: 371 KKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHR 430

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK-DSVSWNSMLTG 235
                T   G    +     LI +  R G + EA   + ++  K + V W S+L+G
Sbjct: 431 YFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSG 486



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 1/141 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCGSV  A ++F  + ++ +  W +++     +G   + LE +  M   G+   A T
Sbjct: 352 MYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAIT 411

Query: 61  FPCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC+      D       +    G   +      L+ +  +     +A+   +RM
Sbjct: 412 FIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERM 471

Query: 120 GEKEDVVLWNSIISAYSASGQ 140
             K + V+W S++S     G 
Sbjct: 472 PIKANKVIWTSLLSGSRKHGN 492


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/638 (35%), Positives = 354/638 (55%), Gaps = 48/638 (7%)

Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQK 258
           N  IA + R   +  A  V  ++  + +V+WN+ML+G+ +     K      EL     +
Sbjct: 77  NKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAH---ELFDKIPE 133

Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
           PD V             N++    L +Y +K                             
Sbjct: 134 PDSVSY-----------NIMLVCYLRSYGVKAALA------------------------F 158

Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV-QLEGLDADVMIIGSVLMACSGLKC 377
           F +M  +D  SW T+I+G+AQN    KA +LF  + +  G+    MI G V         
Sbjct: 159 FNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGD----- 213

Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
           +   +E++  +   G+  +V+  A++  Y K G ++ +  +F+ +  K++V+W SMI+ Y
Sbjct: 214 LEAAEELYKNV---GMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGY 270

Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
           V N  A + L++F  M E+ V  + ++L S L   S+LS L  G++++  + +   + + 
Sbjct: 271 VENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDT 330

Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
           +  +SL+ MY +CG LD A K+F  +  KD+I W +MI+    HG G+ A+ LF KM   
Sbjct: 331 TACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNG 390

Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
           +  PD ITF+A++ AC+H+G ++ G ++ + M+ ++ ++  P HY C++DLLGRA  L+E
Sbjct: 391 TMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDE 450

Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
           A   ++ M   P A ++  LLGACR+H N +L E  A+ LL LDP +   YV ++N++AA
Sbjct: 451 AVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAA 510

Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
           + KW  V +VR  M+   + K PG SWIEI +  H F + D+ H E   I+KKL E+  K
Sbjct: 511 TNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGK 570

Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVD 797
           + +  GYV   +F LH+VEEE K ++L  HSE+LAIA+G++K+  G+ IR+ KNLRVC D
Sbjct: 571 M-KLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGD 629

Query: 798 CHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           CH   K +S +  RE++VRD  RFHHF  G CSCGDYW
Sbjct: 630 CHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 185/419 (44%), Gaps = 77/419 (18%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F+K+S RT  TWN ML  Y                +V G   +A            
Sbjct: 92  ARNVFEKMSVRTTVTWNTMLSGYT---------------KVAGKVKEA------------ 124

Query: 71  LKDLDCGAKIHGLVLKCG-YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
                     H L  K    DS  +  N ++  Y + Y  + A   F++M  K D+  WN
Sbjct: 125 ----------HELFDKIPEPDSVSY--NIMLVCYLRSYGVKAALAFFNKMPVK-DIASWN 171

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVT-----NAYTFVAALQACEDSSFETLGMEIHA 184
           ++IS ++ +GQ  +A  LF  M     V+     + Y     L+A E+  ++ +GM+   
Sbjct: 172 TLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEEL-YKNVGMK--- 227

Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
                     V V  A++  Y + GK+  A  +  ++  K+ V+WNSM+ G+V+N   C+
Sbjct: 228 ---------SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVEN---CR 275

Query: 245 A---MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
           A   ++ F+ +  +  +P+ +   + +     L  L  G+++H    K     D     +
Sbjct: 276 AEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTS 335

Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
           L+ MY KC  ++   ++F +M  +D I+W  +I+GYAQ+    KAL LF  ++   +  D
Sbjct: 336 LISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPD 395

Query: 362 VMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
            +   +V++AC+       G++     K+  G   +      V    ++D+ G+ G +D
Sbjct: 396 WITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKP-----VHYTCVIDLLGRAGRLD 449



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 2/222 (0%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y K G V  AE++F +++ + + TWN+M+  YV N      L+ +  M    +  +  + 
Sbjct: 239 YMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSL 298

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+  C+ L  L  G ++H LV K           SL++MY KC D   A +LF  M  
Sbjct: 299 SSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPR 358

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K DV+ WN++IS Y+  G   +AL LF +M+   +  +  TFVA + AC  + F  LG++
Sbjct: 359 K-DVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQ 417

Query: 182 IHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
              +  K  G   +      +I +  R G++ EA  ++ ++ 
Sbjct: 418 YFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMP 459



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 128/274 (46%), Gaps = 9/274 (3%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y +   V  A   F+K+  + + +WN ++  +  NG+  +  + +S M       +  ++
Sbjct: 146 YLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP----EKNGVSW 201

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             +I       DL+   +++  V   G  S   +  +++  Y K      A ++F RM  
Sbjct: 202 SAMISGYVEHGDLEAAEELYKNV---GMKSV-VVETAMLTGYMKFGKVELAERIFQRMAV 257

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K ++V WNS+I+ Y  + +  + L +F+ M    +  N  +  + L  C + S   LG +
Sbjct: 258 K-NLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQ 316

Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
           +H    KS  +       +LI+MY +CG +  A  +  ++  KD ++WN+M++G+ Q+  
Sbjct: 317 MHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGA 376

Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLG 275
             KA+  F +++    KPD +  V  + A    G
Sbjct: 377 GRKALHLFDKMRNGTMKPDWITFVAVILACNHAG 410



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/296 (19%), Positives = 123/296 (41%), Gaps = 45/296 (15%)

Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
           SD+   N  +  + + C +     VF +M+ +  ++W T+++GY                
Sbjct: 71  SDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYT--------------- 115

Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
                                 K   + KE H    +    D V  N ++  Y +   + 
Sbjct: 116 ----------------------KVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVK 153

Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
            +   F  +  KD+ SW ++IS +  NG   +A +LF +M E N     ++  + +S   
Sbjct: 154 AALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN----GVSWSAMISGYV 209

Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
               L+  +EL   +  K   +E    ++++  Y + G +++A ++F  +  K+L+ W S
Sbjct: 210 EHGDLEAAEELYKNVGMKSVVVE----TAMLTGYMKFGKVELAERIFQRMAVKNLVTWNS 265

Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
           MI     + R +  + +F  M      P+ ++  ++L  CS+   +  G++  +++
Sbjct: 266 MIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLV 321



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  A +LF ++ ++ V TWNAM+  Y  +G   + L  + +MR   +  D  T
Sbjct: 339 MYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWIT 398

Query: 61  FPCVIKACAMLKDLDCGAK 79
           F  VI AC     +D G +
Sbjct: 399 FVAVILACNHAGFVDLGVQ 417


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/581 (37%), Positives = 337/581 (58%), Gaps = 3/581 (0%)

Query: 257  QKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
              P  +    A+ ++ RL + L  G++LHA ++K    ++  +  +L+ +YAKC  ++  
Sbjct: 545  PNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRA 604

Query: 316  GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
             RVF +M     + WT +I  Y       +A+ + R     G+  D      VL AC+ +
Sbjct: 605  QRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARI 664

Query: 376  KCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
              ++  + +     ++G++  V +  A VD+Y KCG +  +R VF+ +  KD V+W +M+
Sbjct: 665  ADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMV 724

Query: 435  SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
              Y  NG   EAL+LF  M    ++ D   +  ALSA + L  L  G++    +    F 
Sbjct: 725  GGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFL 784

Query: 495  LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
                + ++L+DMYA+CG+   A  VF  ++ KD+I+W +MI   G+ G  K+A  L  +M
Sbjct: 785  DNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQM 844

Query: 555  EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
            E      +  TF+ LL +C+H+GLI +G+++   M   Y + P  EHY C+VDLL RA  
Sbjct: 845  EKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGL 904

Query: 615  LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNV 674
            L+EA+Q V  M +   A +  ALLG C++H N EL E V K+L+ L+P N GNYV++SN+
Sbjct: 905  LQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNI 964

Query: 675  FAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
            ++   +W+D  ++R+ M+  G++K P  SW+E   K+H F   DKSH  SD+IYKKL E+
Sbjct: 965  YSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDEL 1024

Query: 735  TEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRV 794
              ++ +  GY   T+ V+ +VE+EEK   L  HSE+LAIA+ +L +  G  IR+TKNLRV
Sbjct: 1025 GLEM-KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRV 1083

Query: 795  CVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            C DCH+  KLVSR+  RE++VRD NRFH F  G CSC DYW
Sbjct: 1084 CSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 2/327 (0%)

Query: 48  RMRVLGISVDAFTFPCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC 106
           R+  L  +    T P  +K+ + L   L  G ++H   LK    +   ++ SL+++YAKC
Sbjct: 539 RVHCLLPNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKC 598

Query: 107 YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
               +A+++FD M      V W ++I+AY  +G   EA+ + R     G+  +++T V  
Sbjct: 599 GLLHRAQRVFDEM-PHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRV 657

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS 226
           L AC   +    G  +  A  + G    V+VA A + +Y +CG+M +A  V  ++ +KD+
Sbjct: 658 LTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDA 717

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAY 286
           V+W +M+ G+  N    +A+  F  +Q  G KPD      A+SA  RLG L  G++    
Sbjct: 718 VAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRM 777

Query: 287 AIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKA 346
                F+ +  +G  L+DMYAKC        VF QM  +D I W  +I G         A
Sbjct: 778 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIA 837

Query: 347 LELFRTVQLEGLDADVMIIGSVLMACS 373
             L   ++  G+  +      +L +C+
Sbjct: 838 FALVGQMEKSGVKLNDNTFIGLLCSCT 864



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 171/346 (49%), Gaps = 4/346 (1%)

Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           G ++HA ++K   +   +V  +L+++YA+CG +  A  V  ++ +  +V W +++T ++ 
Sbjct: 569 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 628

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
                +A+   R     G +PD    V  ++A  R+ +L  G+ +   A ++G    + +
Sbjct: 629 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 688

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
               +D+Y KC  +     VF +M  +D ++W  ++ GYA N    +AL+LF  +Q EG+
Sbjct: 689 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 748

Query: 359 DADVMIIGSVLMACSGLKCMSQTKE-IHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
             D   +   L AC+ L  +   ++ I      + L + V+  A++D+Y KCG+   +  
Sbjct: 749 KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 808

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ +  KD++ W +MI      G    A  L   M ++ V+ +  T +  L + +   +
Sbjct: 809 VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGL 868

Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFN 521
           ++ G+     +  K +++   +     +VD+ +R G L  A+++ +
Sbjct: 869 IQDGRRYFHNMT-KLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVD 913



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KCG +  A+++FD++   +   W A++ AY+  G+    +         G+  D+FT
Sbjct: 594 LYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFT 653

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              V+ ACA + DL  G  +     + G   + F+  + V +Y KC +  KAR++FD+M 
Sbjct: 654 AVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMR 713

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D V W +++  Y+++G   EAL LF  MQ  G+  + Y    AL AC       LG 
Sbjct: 714 HK-DAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGR 772

Query: 181 EIHAATVKSGQNLQVYV-ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
           +     V   + L   V   ALI MYA+CG   EA  V  Q+  KD + WN+M+ G 
Sbjct: 773 QA-IRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL 828


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/658 (32%), Positives = 380/658 (57%), Gaps = 7/658 (1%)

Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
           ++T  S +   +   N+LI +Y +C K+  A  +  ++  +  VS+N ++ G++ +  + 
Sbjct: 44  SSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHL 103

Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
           + ++ F+ +  +  +P++      +SA    G +  G + H +  K G V    + ++L+
Sbjct: 104 EVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLV 163

Query: 304 DMYAKCCCVNYMGRVFYQMTAQ-----DFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            MY+KC  V+   +V            D   + +++    ++    +A+E+   +  EG+
Sbjct: 164 HMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGV 223

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
             D +   SV+  C  ++ +    ++H  +++ GL+ D+ + + +VD++GKCG++  +R 
Sbjct: 224 VWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARK 283

Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
           VF+ +++++VV WTS++++Y+ NG   E L L   M+     S+  T    L+A + ++ 
Sbjct: 284 VFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAA 343

Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
           L+ G  L+  + + G      V ++L++MY++CG +D +  VF  ++ +D+I W +MI  
Sbjct: 344 LRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICG 403

Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
              HG GK A+ LF  M +    P+H+TF+ +L AC+H  L+NEG  +L  +   ++++P
Sbjct: 404 YSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEP 463

Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
             EHY C+V +L RA  LEEA  F+R+ Q++     W  LL AC +H N  LG  +A+ +
Sbjct: 464 GLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETI 523

Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
           L++DP + G Y L+SN++A +R W  V  +R  MR   +KK PG SWIEI N +H F + 
Sbjct: 524 LQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSD 583

Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
             +H E  +IY K+  + E + ++ GYV   + VLH+VE+E+K   L  HSE+LAIAYG+
Sbjct: 584 GSNHPECIQIYNKVQLLLEMI-KQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGL 642

Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           +K    + IR+ KNLR+C DCH+  KL+S++  R ++VRDA+RFHHF  G C+C D+W
Sbjct: 643 MKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 245/491 (49%), Gaps = 21/491 (4%)

Query: 69  AMLKDLDCGAKIHGLVLKCGYDSTD--------FIVNSLVAMYAKCYDFRKARQLFDRMG 120
           A  K+L+ G  IH  +L     ST           +NSL+ +Y KC   R AR LFD M 
Sbjct: 23  ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            +  VV +N ++  Y  SG+ LE + LF+ M       N Y F   L AC  S     GM
Sbjct: 83  LRS-VVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGM 141

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLY----QLEN-KDSVSWNSMLTG 235
           + H    K G     +V ++L+ MY++C  +  A  VL      ++N  D+  +NS+L  
Sbjct: 142 QCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNA 201

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
            V++    +A++    +   G   D V  V+ +   G++ +L  G ++HA  +K G   D
Sbjct: 202 LVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFD 261

Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
           + +G+ L+DM+ KC  V    +VF  +  ++ + WT+++  Y QN    + L L   +  
Sbjct: 262 VFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDR 321

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDY 414
           EG  ++      +L A +G+  +     +H  + + G+ + VI+ NA++++Y KCG ID 
Sbjct: 322 EGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDS 381

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           S +VF  + ++D+++W +MI  Y  +GL  +AL LF  M  A    + +T V  LSA + 
Sbjct: 382 SYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAH 441

Query: 475 LSILKKG-KELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLIL 530
           L+++ +G   LN  +  K F +E  +   + +V +  R G L+ A       Q K D++ 
Sbjct: 442 LALVNEGFYYLNQLM--KHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVA 499

Query: 531 WTSMINANGLH 541
           W  ++NA  +H
Sbjct: 500 WRVLLNACNIH 510



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 228/446 (51%), Gaps = 13/446 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           +Y KC  +  A  LFD++S R+V ++N ++G Y+ +GE L V++ +  M       + + 
Sbjct: 64  LYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYV 123

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD--- 117
           F  V+ ACA    +  G + HG + K G     F+ +SLV MY+KC+    A Q+ +   
Sbjct: 124 FTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEH 183

Query: 118 -RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
             +    D   +NS+++A   SG+  EA+ +   M   G+V ++ T+V+ +  C      
Sbjct: 184 GNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDL 243

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
            LG+++HA  +K G    V+V + L+ M+ +CG +  A  V   L+N++ V W S++T +
Sbjct: 244 GLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAY 303

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
           +QN  + + +     +   G   ++      ++A   +  L +G  LHA   K G  + +
Sbjct: 304 LQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRV 363

Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
            +GN L++MY+KC C++    VF+ M  +D I+W  +I GY+Q+    +AL LF+ +   
Sbjct: 364 IVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSA 423

Query: 357 GLDADVMIIGSVLMACSGLKCMSQ-----TKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
           G   + +    VL AC+ L  +++      + +  + +  GL        +V V  + G 
Sbjct: 424 GECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYT---CVVAVLCRAGM 480

Query: 412 IDYSRNVFESIESK-DVVSWTSMISS 436
           ++ + N   + + K DVV+W  ++++
Sbjct: 481 LEEAENFMRTTQVKWDVVAWRVLLNA 506


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/569 (37%), Positives = 336/569 (59%), Gaps = 3/569 (0%)

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
           ++A  +  NL   + +HA+  +     D  + N+L+ MY KC  V+    VF +M ++D 
Sbjct: 67  IAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDV 126

Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
           +SWT +IAGYAQN    +A+ L   +       +     S+L A       S  +++H  
Sbjct: 127 VSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHAL 186

Query: 388 IIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
            ++     D+ + +A++D+Y +C  +D +  VF+ + SK+ VSW ++I+ +         
Sbjct: 187 AVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETT 246

Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDM 506
           L  F  M      +   T  S  SA + +  L++G+ ++  +I+ G  L   V ++++ M
Sbjct: 247 LMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGM 306

Query: 507 YARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITF 566
           YA+ G++  A KVF+ +  +DL+ W +M+ A   +G GK A+  F ++       + ITF
Sbjct: 307 YAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITF 366

Query: 567 LALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
           L++L ACSH GL+ EGK + ++M+ DY + P  +HY   VDLLGRA  L+EA  FV  M 
Sbjct: 367 LSVLTACSHGGLVKEGKHYFDMMK-DYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMP 425

Query: 627 IEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQ 686
           +EPTA VW ALLGACR+H N ++G+  A  + ELDP + G  VL+ N++A++ KW D  +
Sbjct: 426 MEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAAR 485

Query: 687 VRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVA 746
           VR  M+ +G+KK P  SW++I N +H F+A D +H +S +IY+   EI  ++ ++ GYV 
Sbjct: 486 VRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRI-KKAGYVP 544

Query: 747 QTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVS 806
            T  VL ++ E+E+   L  HSE++A+A+ ++    G+ IRI KN+R+C DCHS  K VS
Sbjct: 545 NTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVS 604

Query: 807 RLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           ++F RE+VVRD NRFHHF  G CSCGDYW
Sbjct: 605 KVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 170/332 (51%), Gaps = 12/332 (3%)

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           +  +I ACA  K+L     IH  + +       F++NSL+ MY KC     AR +FD+M 
Sbjct: 63  YHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMP 122

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + DVV W  +I+ Y+ +    EA+GL  +M R     N +TF + L+A       ++G 
Sbjct: 123 SR-DVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGE 181

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++HA  VK   +  VYV +AL+ MYARC +M  A  V  +L +K+ VSWN+++ GF +  
Sbjct: 182 QMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKA 241

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
                +  F E+Q  G         +  SA  R+G L  G+ +HA+ IK G      +GN
Sbjct: 242 DGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGN 301

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
           T++ MYAK   +    +VF +M  +D ++W T++   AQ     +A+  F  ++  G+  
Sbjct: 302 TMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQL 361

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
           + +   SVL ACS           HG ++++G
Sbjct: 362 NQITFLSVLTACS-----------HGGLVKEG 382



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 142/282 (50%), Gaps = 1/282 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG+V DA  +FDK+  R V +W  ++  Y  N  P   +     M       + FT
Sbjct: 104 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 163

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  ++KA         G ++H L +K  +D   ++ ++L+ MYA+C     A  +FDR+ 
Sbjct: 164 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 223

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K +V  WN++I+ ++        L  F EMQR G     +T+ +   A         G 
Sbjct: 224 SKNEVS-WNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 282

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +HA  +KSGQ L  +V N ++ MYA+ G M +A  V  +++ +D V+WN+MLT   Q  
Sbjct: 283 WVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYG 342

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
           L  +A+  F E++  G + +Q+  ++ ++A    G +  GK 
Sbjct: 343 LGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKH 384



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 120/218 (55%), Gaps = 1/218 (0%)

Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
           S++ AC+  K ++  + IH ++ R  L+ D  +LN+++ +Y KCG +  +R+VF+ + S+
Sbjct: 65  SIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSR 124

Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
           DVVSWT +I+ Y  N +  EA+ L   M  A    +  T  S L A  +      G++++
Sbjct: 125 DVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMH 184

Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
              ++  ++ +  V S+L+DMYARC  +D+A  VF+ + +K+ + W ++I        G+
Sbjct: 185 ALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGE 244

Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGK 583
             +  F +M+   F   H T+ ++  A +  G + +G+
Sbjct: 245 TTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 282



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 115/269 (42%), Gaps = 14/269 (5%)

Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
           S ++A +    L   + ++  + R     +  + +SL+ MY +CGA+  A  VF+ + ++
Sbjct: 65  SIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSR 124

Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
           D++ WT +I     +     AI L   M    F P+  TF +LL A    G  + G++ +
Sbjct: 125 DVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQ-M 183

Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
             +   Y  D      + L+D+  R   ++ A      + +      W AL+      + 
Sbjct: 184 HALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL-VSKNEVSWNALIAGF---AR 239

Query: 647 KELGEIVAKKLLELDPGNPG-NYVLISNVFAASRKWKDVEQ---VRMRMRGSGLKKTPGS 702
           K  GE    K  E+     G  +   S++F+A  +   +EQ   V   +  SG K T   
Sbjct: 240 KADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLT--- 296

Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKL 731
               +GN +    A+  S  ++ +++ ++
Sbjct: 297 --AFVGNTMLGMYAKSGSMVDARKVFDRM 323


>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 693

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/618 (35%), Positives = 353/618 (57%), Gaps = 34/618 (5%)

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC- 309
           +L G  +KP      N +    +   L  GK++H +    GFV  + I N ++ MYAKC 
Sbjct: 77  QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCG 136

Query: 310 -----------------CCVNYM-------------GRVFYQMTAQDFISWTTIIAGYAQ 339
                            C  N M               +F +M  +D  SWT ++ GY +
Sbjct: 137 SLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVK 196

Query: 340 NNCHLKALELFRTVQ-LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLV 397
            +   +AL L+  +Q +     ++  + S + A + +KC+ + KEIHG+I+R GL SD V
Sbjct: 197 KDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEV 256

Query: 398 ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
           + ++++D+YGKCG ID +RN+F+ I  KDVVSWTSMI  Y  +    E   LF  +  + 
Sbjct: 257 LWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSC 316

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
              +  T    L+A + L+  + G++++G++ R GF+     +SSL+DMY +CG ++ A 
Sbjct: 317 ERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESAR 376

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            V +     DL+  TS+I     +G+   A+  F  +      PDH+TF+ +L AC+H+G
Sbjct: 377 HVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 436

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L+ +G +F   +   + L    +HY CLVDLL R+   E+    +  M ++P+  +W ++
Sbjct: 437 LVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASV 496

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           LG C  + N +L E  A++L +++P NP  YV ++N++AA+ KW++  ++R RM+  G+ 
Sbjct: 497 LGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGIT 556

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K PGSSW EI  K H FIA D SH   ++I + L E+ +K++ E GYV  T  VLH+VE+
Sbjct: 557 KKPGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEE-GYVPATSLVLHDVED 615

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           E+K + L  HSE+LA+A+ +L + EG+ I++ KNLR CVDCHS  K +S++  R++ +RD
Sbjct: 616 EQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRD 675

Query: 818 ANRFHHFEAGVCSCGDYW 835
           + RFH FE G CSC DYW
Sbjct: 676 STRFHCFENGQCSCRDYW 693



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 170/339 (50%), Gaps = 6/339 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFT 60
           Y + G + +A  LFD++ +R  ++W AM+  YV   +P   L  YS M RV     + FT
Sbjct: 163 YAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFT 222

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
               + A A +K +  G +IHG +++ G DS + + +SL+ MY KC    +AR +FD++ 
Sbjct: 223 VSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKII 282

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
           +K DVV W S+I  Y  S +  E   LF E+       N YTF   L AC D + E LG 
Sbjct: 283 DK-DVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGR 341

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
           ++H    + G +   + +++LI MY +CG +  A  V+      D VS  S++ G+ QN 
Sbjct: 342 QVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNG 401

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE-LHAYAIKQGFVSDLQIG 299
              +A+++F  L  +G KPD V  VN +SA    G +  G E  ++   K          
Sbjct: 402 KPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHY 461

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQD--FISWTTIIAG 336
             L+D+ A+      +  V  +M  +   F+ W +++ G
Sbjct: 462 TCLVDLLARSGRFEQLKSVLSEMPMKPSKFL-WASVLGG 499



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 206/456 (45%), Gaps = 46/456 (10%)

Query: 58  AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
           A T+  +I+ C+  + L+ G K+H  +   G+     I N ++ MYAKC     AR++FD
Sbjct: 87  ASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFD 146

Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR------VGLVT---------NAYT 162
            M E+ DV  WN +++ Y+  G   EA  LF EM          +VT          A  
Sbjct: 147 EMPER-DVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALV 205

Query: 163 FVAALQACEDSSFETL-----------------GMEIHAATVKSGQNLQVYVANALIAMY 205
             + +Q   +S                      G EIH   V++G +    + ++L+ MY
Sbjct: 206 LYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY 265

Query: 206 ARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
            +CG + EA  +  ++ +KD VSW SM+  + ++  + +    F EL G+ ++P++    
Sbjct: 266 GKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFS 325

Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
             ++A   L     G+++H Y  + GF       ++L+DMY KC  +     V       
Sbjct: 326 GVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKP 385

Query: 326 DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
           D +S T++I GYAQN    +AL+ F  +   G   D +   +VL AC+    + +  E  
Sbjct: 386 DLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 445

Query: 386 GYIIRKGLSDLVILN----AIVDVYGKCGNIDYSRNVFESIESKDV-VSWTSMI---SSY 437
             I  K   DL   +     +VD+  + G  +  ++V   +  K     W S++   S+Y
Sbjct: 446 YSITEK--HDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTY 503

Query: 438 VHNGLANEAL-ELFYLMNEANVESDSITLVSALSAA 472
            +  LA EA  ELF +  E  V    +T+ +  +AA
Sbjct: 504 GNIDLAEEAAQELFKIEPENPV--TYVTMANIYAAA 537



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MYGKCG + +A  +FDK+  + V +W +M+  Y  +         +S +       + +T
Sbjct: 264 MYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYT 323

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
           F  V+ ACA L   + G ++HG + + G+D   F  +SL+ MY KC +   AR + D   
Sbjct: 324 FSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGC- 382

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            K D+V   S+I  Y+ +G+  EAL  F  + + G   +  TFV  L AC  +     G+
Sbjct: 383 PKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL 442

Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS-VSWNSMLTG 235
           E  ++ T K            L+ + AR G+  +   VL ++  K S   W S+L G
Sbjct: 443 EFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGG 499



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 8/199 (4%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG++  A  + D   +  + +  +++G Y  NG+P   L+ +  +   G   D  T
Sbjct: 365 MYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVT 424

Query: 61  FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           F  V+ AC     ++ G +  + +  K     T      LV + A+   F + + +   M
Sbjct: 425 FVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEM 484

Query: 120 GEKEDVVLWNSIISAYSASG------QCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
             K    LW S++   S  G      +  + L        V  VT A  + AA +  E+ 
Sbjct: 485 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEG 544

Query: 174 SFETLGMEIHAATVKSGQN 192
                  EI   T K G +
Sbjct: 545 KMRKRMQEI-GITKKPGSS 562


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/559 (37%), Positives = 344/559 (61%), Gaps = 5/559 (0%)

Query: 281 KELHAYAIKQGFVSDLQIGNT--LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
           K++HA++I+ G        N   +  + +    +++  ++F Q+ A +  +W T+I G+A
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111

Query: 339 QNNCHLKALELFRTVQL-EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL- 396
           ++     A+ELF  +     +  D      +  A + L  +S  + IH  ++R G   L 
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLR 171

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            + N++V +Y   G++  +  VFE +  +D V+W S+I+ +  NG+ NEAL L+  M   
Sbjct: 172 FVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSE 231

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
            VE D  T+VS LSA   L  L  G+ ++ ++++ G       +++L+D+Y++CG    A
Sbjct: 232 GVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDA 291

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
            KVF+ ++ + ++ WTS+I    ++G G  A+ LF ++E +   P  ITF+ +LYACSH 
Sbjct: 292 QKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHC 351

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           G+++EG  +   M+ +Y + P  EH+ C+VDLL RA  + +AY ++R+M + P A +W  
Sbjct: 352 GMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRT 411

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LLGAC +H + ELGE+   ++  L+  + G++VL+SN++A+ R+W DV+ VR  M   G+
Sbjct: 412 LLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGV 471

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
           KKTPG S +E+ N+++ FI  D+SH +S+E Y  LA+IT+ L+ E GYV +T  VL ++E
Sbjct: 472 KKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIE-GYVPRTVNVLADIE 530

Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
           EEEK   L  H+E++AIA+ ++ +  G+ IRI KNLRVC DCH   KL+S++F RE++VR
Sbjct: 531 EEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVR 590

Query: 817 DANRFHHFEAGVCSCGDYW 835
           D +RFHHF+ G CSC DYW
Sbjct: 591 DRSRFHHFKDGSCSCKDYW 609



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 147/271 (54%), Gaps = 2/271 (0%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFTFPCVIKACA 69
           A Q+F+++    +FTWN M+  +  +  P   +E +S+M     I  D  TFP + KA A
Sbjct: 88  AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147

Query: 70  MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
            L D+  G  IH +V++ G+DS  F+ NSLV MY+       A Q+F+ M  + D V WN
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYR-DRVAWN 206

Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           S+I+ ++ +G   EAL L+REM   G+  + +T V+ L AC +     LG  +H   VK 
Sbjct: 207 SVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKV 266

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G     + +NAL+ +Y++CG   +A  V  ++E +  VSW S++ G   N L  +A++ F
Sbjct: 267 GLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLF 326

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
            EL+  G KP ++  V  + A    G L  G
Sbjct: 327 GELERQGLKPSEITFVGVLYACSHCGMLDEG 357



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 192/393 (48%), Gaps = 30/393 (7%)

Query: 64  VIKACAMLKDLDCGA------KIHGLVLKCGYD--STDFIVNSLVAMYAKCYDFRKARQL 115
           +++ C  L  L CG+      +IH   ++ G    + DF  + + A+ +       A Q+
Sbjct: 33  ILRKCISLVQL-CGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQI 91

Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG-LVTNAYTFVAALQACEDSS 174
           F+++ +  ++  WN++I  ++ S     A+ LF +M     ++ + +TF    +A     
Sbjct: 92  FNQI-QAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLM 150

Query: 175 FETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLT 234
             +LG  IH+  V++G +   +V N+L+ MY+  G +  A  V   +  +D V+WNS++ 
Sbjct: 151 DVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVIN 210

Query: 235 GFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVS 294
           GF  N +  +A+  +RE+   G +PD    V+ +SA   LG L  G+ +H Y +K G V 
Sbjct: 211 GFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQ 270

Query: 295 DLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ 354
           +    N L+D+Y+KC       +VF +M  +  +SWT++I G A N    +AL+LF  ++
Sbjct: 271 NQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELE 330

Query: 355 LEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYG 407
            +GL    +    VL ACS       G     + KE +G + R     +     +VD+  
Sbjct: 331 RQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPR-----IEHHGCMVDLLC 385

Query: 408 KCGNI----DYSRNVFESIESKDVVSWTSMISS 436
           + G +    DY RN+       + V W +++ +
Sbjct: 386 RAGKVGDAYDYIRNM---PVPPNAVIWRTLLGA 415



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 1/170 (0%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY   GS+  A Q+F+ +S R    WN+++  +  NG P   L  Y  M   G+  D FT
Sbjct: 180 MYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFT 239

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              ++ AC  L  L  G ++H  ++K G        N+L+ +Y+KC +FR A+++FD M 
Sbjct: 240 MVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEM- 298

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
           E+  VV W S+I   + +G   EAL LF E++R GL  +  TFV  L AC
Sbjct: 299 EERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYAC 348


>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 558

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/561 (39%), Positives = 343/561 (61%), Gaps = 9/561 (1%)

Query: 279 NGKELHAYAIKQGFVSD-LQIGNTLMDMYAKCC-CVNYMGRVFYQMTAQDFISWTTIIAG 336
           N   LH Y IK    +D L +   L+   A     ++Y   VF ++ + D I++ TII  
Sbjct: 3   NVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRS 62

Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SD 395
           +++      +L  F +++  G+  D      VL ACS L+       +H  I++ GL SD
Sbjct: 63  HSRFFPS-HSLFYFFSMRSNGIPLDNFTFPFVLKACSRLQI---NLHLHSLIVKYGLDSD 118

Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN- 454
           + + NA++ VYG CG+++ +  VF+ +  +D VSW+++I+S+++NG A+EAL+LF  M  
Sbjct: 119 IFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQL 178

Query: 455 EANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALD 514
           E  V  D +T++S +SA S L  L+ G+ +  FI R G  +  ++ ++L+DM++RCG++D
Sbjct: 179 EDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSID 238

Query: 515 IANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
            +  VF  +  ++++ WT++IN  G+HGR   A+ +F+ M      PD++TF  +L ACS
Sbjct: 239 ESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACS 298

Query: 575 HSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVW 634
           H GL+ EG    E +R  Y++DP  +HY C+VD+LGRA  L EAY FV  M ++P + +W
Sbjct: 299 HGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIW 358

Query: 635 CALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGS 694
             LLGAC  H+N  L E V  K+ ++     G+ VL+SNV+ A+ +W +   +R +MR  
Sbjct: 359 RTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREK 418

Query: 695 GLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
            + K PG S I +   IH F++ D SH +S++I K L+ I   L R  GY+ QT+ VLH+
Sbjct: 419 RIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDL-RNRGYMMQTKNVLHD 477

Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
           +EEEE+   L  HSE+LA+A+ +L   +   IRI KNLR+C DCHSF K +S  F R+++
Sbjct: 478 IEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKII 537

Query: 815 VRDANRFHHFEAGVCSCGDYW 835
           +RD NRFHHFE G+CSC DYW
Sbjct: 538 IRDRNRFHHFEKGLCSCHDYW 558



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 177/337 (52%), Gaps = 10/337 (2%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           AR +F R+    D + +N+II ++S       +L  F  M+  G+  + +TF   L+AC 
Sbjct: 41  ARYVFSRI-PSPDTIAYNTIIRSHSRFFPS-HSLFYFFSMRSNGIPLDNFTFPFVLKAC- 97

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
             S   + + +H+  VK G +  ++V NALI +Y  CG +  A  V  ++  +DSVSW++
Sbjct: 98  --SRLQINLHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWST 155

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQK-PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
           ++  F+ N    +A+  F ++Q   +  PD+V  ++ +SA   LG+L  G+ + A+  + 
Sbjct: 156 VIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRL 215

Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
           G    + +G  L+DM+++C  ++    VF +M  ++ ++WT +I G   +    +AL +F
Sbjct: 216 GLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMF 275

Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGK 408
            +++  G+  D +    VL+ACS    + +  +I   I +    D ++     +VD+ G+
Sbjct: 276 HSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGR 335

Query: 409 CGNIDYSRNVFESIESK-DVVSWTSMISSYV-HNGLA 443
            G ++ + +  E +  K + + W +++ + V HN L 
Sbjct: 336 AGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLG 372



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 166/342 (48%), Gaps = 24/342 (7%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +F ++       +N ++ ++ S   P   L  +  MR  GI +D FTFP V+KAC+ 
Sbjct: 41  ARYVFSRIPSPDTIAYNTIIRSH-SRFFPSHSLFYFFSMRSNGIPLDNFTFPFVLKACSR 99

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
           L+       +H L++K G DS  F+ N+L+ +Y  C     A ++FD M E+ D V W++
Sbjct: 100 LQ---INLHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSER-DSVSWST 155

Query: 131 IISAYSASGQCLEALGLFREMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
           +I+++  +G   EAL LF +MQ    +V +  T ++ + A        LG  + A   + 
Sbjct: 156 VIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRL 215

Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
           G  + V +  ALI M++RCG + E+  V  ++  ++ ++W +++ G   +    +A+  F
Sbjct: 216 GLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMF 275

Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
             ++ +G +PD V     + A    G +  G ++   +I++ +  D      L+D Y   
Sbjct: 276 HSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFE-SIRKVYRMD-----PLLDHYG-- 327

Query: 310 CCVNYMGRVFYQMTAQDFIS----------WTTIIAGYAQNN 341
           C V+ +GR      A DF+           W T++     +N
Sbjct: 328 CMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHN 369



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 140/289 (48%), Gaps = 28/289 (9%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
           +YG CGS+  A ++FD++S+R   +W+ ++ ++++NG     L+ + +M++   +  D  
Sbjct: 128 VYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEV 187

Query: 60  TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
           T   VI A + L DL+ G  +   + + G   +  +  +L+ M+++C    ++  +F++M
Sbjct: 188 TMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKM 247

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
             + +V+ W ++I+     G+  EAL +F  M++ G+  +  TF   L AC         
Sbjct: 248 AVR-NVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACS-------- 298

Query: 180 MEIHAATVKSGQNL-----QVYVANALIAMY-------ARCGKMTEAAGVLYQLENK-DS 226
              H   VK G ++     +VY  + L+  Y        R G + EA   + ++  K +S
Sbjct: 299 ---HGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNS 355

Query: 227 VSWNSMLTGFVQNDLYCKAMQFFRELQ--GAGQKPDQVCTVNAVSASGR 273
           + W ++L   V ++    A +   ++    + Q  D V   N   A+GR
Sbjct: 356 IIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGR 404


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/657 (34%), Positives = 358/657 (54%), Gaps = 43/657 (6%)

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARC--GKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
           ++HA  ++SG     YV+ AL+  YA         A  V   + N +   WN ++ G ++
Sbjct: 51  QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
           N+   KA+ F+  +     +P++        A      +  G+++H + +K G  SD+ I
Sbjct: 111 NNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            +  + MYA    +    ++FY   + D + W T+I GY +  C                
Sbjct: 170 KSAGIQMYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLK--C---------------- 210

Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNV 418
                    VL A  GL      K I  +            N +++   K GN+  +R +
Sbjct: 211 --------GVLEAAKGLFAQMPVKNIGSW------------NVMINGLAKGGNLGDARKL 250

Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
           F+ +  +D +SW+SM+  Y+  G   EALE+F  M           L S L+A S++  +
Sbjct: 251 FDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAI 310

Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
            +G+ ++ ++ R    L+  + ++L+DMYA+CG LD+  +VF  ++ +++  W +MI   
Sbjct: 311 DQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGL 370

Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
            +HGR + A++LF K++     P+ IT + +L AC+H+G +++G +  + MR  Y +DP 
Sbjct: 371 AIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPE 430

Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
            EHY C+VDLLGR+    EA   + SM ++P A VW ALLGACR+H N +L E V K LL
Sbjct: 431 LEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILL 490

Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
           EL+P N G YVL+SN++A   ++ DV ++R  M+  G+K  PG S +++   +H F   D
Sbjct: 491 ELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGD 550

Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
            SH +  EIY+KL  I E+L+   G+   T  VL +++EEEK   +  HSE+LAIA+G++
Sbjct: 551 GSHPQMKEIYRKLKIIKERLQM-AGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLI 609

Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
            +  G  I I KNLRVC DCHS  KL+S++F RE++VRD  R+HHF+ G CSC D+W
Sbjct: 610 NTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 230/492 (46%), Gaps = 68/492 (13%)

Query: 78  AKIHGLVLKCGYDSTDFIVNSLVAMYAKCY--DFRKARQLFDRMGEKEDVVLWNSIISAY 135
            ++H LVL+ G+    ++  +L+  YA  +  +F  A ++F  +    +V +WN +I   
Sbjct: 50  TQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSI-PNPNVFIWNIVIKG- 107

Query: 136 SASGQCLEALGLFREMQRVGLV-----TNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
                CLE   LF+ +   G +      N +T+    +AC  +     G +IH   VK G
Sbjct: 108 -----CLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHG 162

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
               V++ +A I MYA  G++ +A  + Y  E+ D V WN+M+ G+++  +   A   F 
Sbjct: 163 IGSDVHIKSAGIQMYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLKCGVLEAAKGLFA 221

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           ++               V   G    ++NG               L  G  L D      
Sbjct: 222 QM--------------PVKNIGSWNVMING---------------LAKGGNLGDAR---- 248

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
                 ++F +M+ +D ISW++++ GY     + +ALE+F+ +Q E       I+ SVL 
Sbjct: 249 ------KLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLA 302

Query: 371 ACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS 429
           ACS +  + Q + +H Y+ R  +  D V+  A++D+Y KCG +D    VFE ++ +++ +
Sbjct: 303 ACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFT 362

Query: 430 WTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFII 489
           W +MI     +G A +ALELF  + E  ++ + ITLV  L+A +    + KG  L  F  
Sbjct: 363 WNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKG--LRIFQT 420

Query: 490 RK---GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR-- 543
            +   G + E      +VD+  R G    A  + N +  K +  +W +++ A  +HG   
Sbjct: 421 MREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFD 480

Query: 544 -----GKVAIDL 550
                GK+ ++L
Sbjct: 481 LAERVGKILLEL 492



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 198/434 (45%), Gaps = 55/434 (12%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A ++F  +    VF WN ++   + N +  + +  Y RM V+    + FT+P + KAC++
Sbjct: 86  ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSV 144

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
            + +  G +IHG V+K G  S   I ++ + MYA       AR++F     + DVV WN+
Sbjct: 145 AQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF--YSGESDVVCWNT 202

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I  Y   G    A GLF +M     V N  ++                           
Sbjct: 203 MIDGYLKCGVLEAAKGLFAQMP----VKNIGSW--------------------------- 231

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
                   N +I   A+ G + +A  +  ++  +D +SW+SM+ G++    Y +A++ F+
Sbjct: 232 --------NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQ 283

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           ++Q    +P +    + ++A   +G +  G+ +HAY  +     D  +G  L+DMYAKC 
Sbjct: 284 QMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCG 343

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            ++    VF +M  ++  +W  +I G A +     ALELF  +Q   +  + + +  VL 
Sbjct: 344 RLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLT 403

Query: 371 ACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
           AC+       GL+     +E +G        +L     +VD+ G+ G    + ++  S+ 
Sbjct: 404 ACAHAGFVDKGLRIFQTMREFYGVD-----PELEHYGCMVDLLGRSGLFSEAEDLINSMP 458

Query: 424 SK-DVVSWTSMISS 436
            K +   W +++ +
Sbjct: 459 MKPNAAVWGALLGA 472



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 3/232 (1%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           K G++ DA +LFD++S+R   +W++M+  Y+S G     LE + +M+        F    
Sbjct: 240 KGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSS 299

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
           V+ AC+ +  +D G  +H  + +        +  +L+ MYAKC       ++F+ M E+E
Sbjct: 300 VLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKERE 359

Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
            +  WN++I   +  G+  +AL LF ++Q   +  N  T V  L AC  + F   G+ I 
Sbjct: 360 -IFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIF 418

Query: 184 AATVK-SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
               +  G + ++     ++ +  R G  +EA  ++  +  K + + W ++L
Sbjct: 419 QTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALL 470



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 145/340 (42%), Gaps = 71/340 (20%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLET----YSRMRVLGISV 56
           MY   G + DA ++F    +  V  WN M+  Y+  G    VLE     +++M V  I  
Sbjct: 176 MYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCG----VLEAAKGLFAQMPVKNIG- 229

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
                                             S + ++N L    AK  +   AR+LF
Sbjct: 230 ----------------------------------SWNVMINGL----AKGGNLGDARKLF 251

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           D M E++++  W+S++  Y ++G+  EAL +F++MQR       +   + L AC +    
Sbjct: 252 DEMSERDEIS-WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAI 310

Query: 177 TLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
             G  +HA   ++   L   +  AL+ MYA+CG++     V  +++ ++  +WN+M+ G 
Sbjct: 311 DQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGL 370

Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
             +     A++ F +LQ    KP+ +  V  ++A             HA  + +G    L
Sbjct: 371 AIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACA-----------HAGFVDKG----L 415

Query: 297 QIGNTLMDMYA-------KCCCVNYMGRVFYQMTAQDFIS 329
           +I  T+ + Y          C V+ +GR      A+D I+
Sbjct: 416 RIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLIN 455



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 8/158 (5%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +    ++F+++ +R +FTWNAM+G    +G     LE +S+++   +  +  T
Sbjct: 338 MYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGIT 397

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
              V+ ACA    +D G +I   + +  G D        +V +  +   F +A  L + M
Sbjct: 398 LVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457

Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV 157
             K +  +W +++ A    G        F   +RVG +
Sbjct: 458 PMKPNAAVWGALLGACRIHGN-------FDLAERVGKI 488


>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/581 (38%), Positives = 352/581 (60%), Gaps = 9/581 (1%)

Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
           DQ   ++ +  S  +  +L    +HA  I+ G   D  +   L+   +KC  ++Y  R+F
Sbjct: 38  DQKQIISLLQRSRHINQVL---PIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF 94

Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
                 +   +T +I G+  +  +L+A++L+  +  E +  D  ++ S+L AC     + 
Sbjct: 95  QYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALR 154

Query: 380 QTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE----SKDVVSWTSMI 434
           + +E+H   ++ G S + ++   I+++YGKCG +  +R VFE +     +KD V WT+MI
Sbjct: 155 EGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMI 214

Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
             +V N   N ALE F  M   NV  +  T+V  LSA S L  L+ G+ ++ ++ +    
Sbjct: 215 DGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIE 274

Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
           L   V ++L++MY+RCG++D A  VF+ ++ +D+I + +MI+   ++G+ + AI+LF  M
Sbjct: 275 LNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVM 334

Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
                 P ++TF+ +L ACSH GL++ G +    M  DY+++P  EHY C+VDLLGR   
Sbjct: 335 VGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGR 394

Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNV 674
           LEEAY  +R+M++ P   +   LL AC++H N ELGE VAK+L +    + G YVL+S+V
Sbjct: 395 LEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHV 454

Query: 675 FAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
           +A+S KWK+  QVR +M+ +G++K PG S IE+ N+IH F+  D  H + + IY+KL E+
Sbjct: 455 YASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEEL 514

Query: 735 TEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRV 794
              L  E GY  + + VL ++E+ EK   L  HSERLAI YG++ +   ++IR+ KNLRV
Sbjct: 515 NRLLRLE-GYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRV 573

Query: 795 CVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
           C DCHS  KL++++  R++VVRD NRFH+FE G CSCGDYW
Sbjct: 574 CYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 614



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 216/419 (51%), Gaps = 10/419 (2%)

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           + IHA  +++G +   ++   L+   ++C  +  A+ +     N +   + +++ GFV +
Sbjct: 56  LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSS 115

Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
             Y +A+Q +  +      PD     + + A G    L  G+E+H+ A+K GF S+  + 
Sbjct: 116 GNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVR 175

Query: 300 NTLMDMYAKCCCVNYMGRVFYQMT----AQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
             +M++Y KC  +    RVF +M     A+D + WT +I G+ +N    +ALE FR +Q 
Sbjct: 176 LRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQG 235

Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
           E +  +   I  VL ACS L  +   + +H Y+ +  +  +L + NA++++Y +CG+ID 
Sbjct: 236 ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDE 295

Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
           ++ VF+ ++ +DV+++ +MIS    NG + +A+ELF +M    +   ++T V  L+A S 
Sbjct: 296 AQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSH 355

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILW 531
             ++  G E+   + R  + +E  +     +VD+  R G L+ A  +   ++ T D I+ 
Sbjct: 356 GGLVDFGFEIFHSMARD-YRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIML 414

Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMR 590
            ++++A  +H   ++   +  ++E    A D  T++ L +  + SG   E  +    M+
Sbjct: 415 GTLLSACKMHKNLELGEQVAKELEDRGQA-DSGTYVLLSHVYASSGKWKEAAQVRAKMK 472



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 205/403 (50%), Gaps = 9/403 (2%)

Query: 79  KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
            IH  +++ G+    F+V  L+   +KC+    A ++F +     +V L+ ++I  + +S
Sbjct: 57  PIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF-QYTHNPNVYLYTALIDGFVSS 115

Query: 139 GQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVA 198
           G  LEA+ L+  M    ++ + Y   + L+AC        G E+H+  +K G +    V 
Sbjct: 116 GNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVR 175

Query: 199 NALIAMYARCGKMTEAAGVLYQLEN----KDSVSWNSMLTGFVQNDLYCKAMQFFRELQG 254
             ++ +Y +CG++ +A  V  ++      KD+V W +M+ GFV+N+   +A++ FR +QG
Sbjct: 176 LRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQG 235

Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
              +P++   V  +SA  +LG L  G+ +H+Y  K     +L +GN L++MY++C  ++ 
Sbjct: 236 ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDE 295

Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
              VF +M  +D I++ T+I+G + N    +A+ELFR +    L    +    VL ACS 
Sbjct: 296 AQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSH 355

Query: 375 LKCMSQTKEIHGYIIRKGLSDLVI--LNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWT 431
              +    EI   + R    +  I     +VD+ G+ G ++ + ++  +++ + D +   
Sbjct: 356 GGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLG 415

Query: 432 SMISS-YVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
           +++S+  +H  L         L +    +S +  L+S + A+S
Sbjct: 416 TLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASS 458



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 193/410 (47%), Gaps = 36/410 (8%)

Query: 4   KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
           KC ++  A ++F       V+ + A++  +VS+G  L  ++ YSRM    I  D +    
Sbjct: 83  KCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMAS 142

Query: 64  VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEK- 122
           ++KAC     L  G ++H   LK G+ S   +   ++ +Y KC +   AR++F+ M E  
Sbjct: 143 ILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDV 202

Query: 123 --EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
             +D V W ++I  +  + +   AL  FR MQ   +  N +T V  L AC       +G 
Sbjct: 203 VAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGR 262

Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
            +H+   K    L ++V NALI MY+RCG + EA  V  +++++D +++N+M++G   N 
Sbjct: 263 WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNG 322

Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
              +A++ FR + G   +P  V  V  ++A    G +  G E+  +++ + +  + QI  
Sbjct: 323 KSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIF-HSMARDYRVEPQI-- 379

Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
              + Y   C V+ +GRV     A D I                      RT++   +  
Sbjct: 380 ---EHYG--CMVDLLGRVGRLEEAYDLI----------------------RTMK---MTP 409

Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
           D +++G++L AC   K +   +++   +  +G +D      +  VY   G
Sbjct: 410 DHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSG 459



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 7/263 (2%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTV----FTWNAMLGAYVSNGEPLRVLETYSRMRVLGISV 56
           +YGKCG + DA ++F+++ +  V      W AM+  +V N E  R LE +  M+   +  
Sbjct: 181 LYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRP 240

Query: 57  DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF 116
           + FT  CV+ AC+ L  L+ G  +H  + K   +   F+ N+L+ MY++C    +A+ +F
Sbjct: 241 NEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVF 300

Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
           D M ++ DV+ +N++IS  S +G+  +A+ LFR M    L     TFV  L AC      
Sbjct: 301 DEMKDR-DVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLV 359

Query: 177 TLGMEI-HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
             G EI H+         Q+     ++ +  R G++ EA  ++  ++   D +   ++L+
Sbjct: 360 DFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLS 419

Query: 235 GFVQNDLYCKAMQFFRELQGAGQ 257
               +       Q  +EL+  GQ
Sbjct: 420 ACKMHKNLELGEQVAKELEDRGQ 442


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/560 (37%), Positives = 341/560 (60%), Gaps = 6/560 (1%)

Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR---VFYQMTAQDFISWTTIIAGY 337
           K++ AY IK    SD+ +   L++        +YM     +F Q+  +D I +  +  GY
Sbjct: 46  KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGY 105

Query: 338 AQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DL 396
           A++N    A  LF  +   GL  D     S+L AC+  K + +   +H + ++ GL+ ++
Sbjct: 106 ARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNI 165

Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
            I   ++++Y +C +++ +R VF+ +E   +VS+ ++I+ Y  +   NEAL LF  +  +
Sbjct: 166 YICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS 225

Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
           N+E   +T++S + + + L  L  GK ++ ++ +KGF+    V ++L+DM+A+CG+L  A
Sbjct: 226 NIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDA 285

Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
             +F  ++ +D   W++MI A   HG G  AI +F +M+ E   PD ITFL LLYACSH+
Sbjct: 286 ISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHA 345

Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
           GL+ +G+ +   M   Y + P  +HY C+VDLLGRA HL+EAY FV  ++I+ T  +W  
Sbjct: 346 GLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRT 405

Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
           LL AC  H N E+ + V +++ ELD  + G+YV++SN++A   +W+DV  +R  M+  G+
Sbjct: 406 LLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGV 465

Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLH-NV 755
            K PG S +E+ N +H F + D  H  S E+ + L E+ +++ +  GYV  T  V H ++
Sbjct: 466 VKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEI-KLVGYVPDTSLVYHADM 524

Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
           EEE K  +L  HSE+LA+A+G+L +  G+ IR+ KNLR+C DCH+  KL+S +FGR++V+
Sbjct: 525 EEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVI 584

Query: 816 RDANRFHHFEAGVCSCGDYW 835
           RD  RFH FE G CSCGD+W
Sbjct: 585 RDVQRFHRFEDGKCSCGDFW 604



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 185/355 (52%), Gaps = 13/355 (3%)

Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
           A  LFD++ +K D++L+N +   Y+ S     A  LF E+   GL+ + YTF + L+AC 
Sbjct: 83  AHHLFDQILDK-DIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACA 141

Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
            S     GM +H   VK G N  +Y+   LI MYA C  M  A GV  ++E    VS+N+
Sbjct: 142 SSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNA 201

Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
           ++TG+ ++    +A+  FRELQ +  +P  V  ++ + +   LG L  GK +H Y  K+G
Sbjct: 202 IITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKG 261

Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
           F   +++   L+DM+AKC  +     +F  M  +D  +W+ +I  +A +   LKA+ +F 
Sbjct: 262 FDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFE 321

Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI-----HGYIIRKGLSDLVILNAIVDVY 406
            ++ EG+  D +    +L ACS    + Q +         Y I  G+        +VD+ 
Sbjct: 322 EMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKH---YGCMVDLL 378

Query: 407 GKCGNIDYSRNVFESIESKDV-VSWTSMISSYVHNG---LANEALELFYLMNEAN 457
           G+ G++D + N  + +E K   + W +++S+   +G   +A   +E  + +++A+
Sbjct: 379 GRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAH 433



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 192/376 (51%), Gaps = 12/376 (3%)

Query: 181 EIHAATVKSGQNLQVYVANALI---AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
           +I A T+K+     + V   LI    +      M  A  +  Q+ +KD + +N M  G+ 
Sbjct: 47  QIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYA 106

Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
           +++    A   F EL  +G  PD     + + A      L  G  LH +A+K G   ++ 
Sbjct: 107 RSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIY 166

Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
           I  TL++MYA+C  +N    VF +M     +S+  II GYA+++   +AL LFR +Q   
Sbjct: 167 ICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASN 226

Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSR 416
           ++   + + SV+M+C+ L  +   K IH Y+ +KG    V +N A++D++ KCG++  + 
Sbjct: 227 IEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAI 286

Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
           ++FE +  +D  +W++MI ++  +G   +A+ +F  M    V  D IT +  L A S   
Sbjct: 287 SIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAG 346

Query: 477 ILKKGKELNGFI--IRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILW 531
           ++++G+   G+   + K + +   +     +VD+  R G LD A    + ++ K   ILW
Sbjct: 347 LVEQGR---GYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILW 403

Query: 532 TSMINANGLHGRGKVA 547
            ++++A   HG  ++A
Sbjct: 404 RTLLSACSTHGNVEMA 419



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 211/458 (46%), Gaps = 28/458 (6%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  LFD++  + +  +N M   Y  +  P      +  +   G+  D +TF  ++KACA 
Sbjct: 83  AHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACAS 142

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
            K L  G  +H   +K G +   +I  +L+ MYA+C D   AR +FD M E+  +V +N+
Sbjct: 143 SKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEM-EQPCIVSYNA 201

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           II+ Y+ S Q  EAL LFRE+Q   +     T ++ + +C       LG  IH    K G
Sbjct: 202 IITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKG 261

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
            +  V V  ALI M+A+CG +T+A  +   +  +D+ +W++M+  F  +    KA+  F 
Sbjct: 262 FDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFE 321

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           E++  G +PD++  +  + A    G +  G+  + Y++ + +     I +     Y   C
Sbjct: 322 EMKREGVRPDEITFLGLLYACSHAGLVEQGRG-YFYSMSKTYGITPGIKH-----YG--C 373

Query: 311 CVNYMGRVFYQMTAQDFIS----------WTTIIAGYAQN-NCHLKALELFRTVQLEGLD 359
            V+ +GR  +   A +F+           W T+++  + + N  +    + R  +L+   
Sbjct: 374 MVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAH 433

Query: 360 ADVMIIGSVLMACSG----LKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYG----KCGN 411
               +I S L A  G    +  + +  +  G +   G S + + N + + +      C +
Sbjct: 434 GGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVS 493

Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
           ++  R + E ++   +V +    S   H  +  E  EL
Sbjct: 494 VELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKEL 531



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 117/237 (49%), Gaps = 3/237 (1%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY +C  +  A  +FD++ Q  + ++NA++  Y  + +P   L  +  ++   I     T
Sbjct: 174 MYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVT 233

Query: 61  FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
              VI +CA+L  LD G  IH  V K G+D    +  +L+ M+AKC     A  +F+ M 
Sbjct: 234 MLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMR 293

Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
            + D   W+++I A++  G  L+A+ +F EM+R G+  +  TF+  L AC  +     G 
Sbjct: 294 VR-DTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGR 352

Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDS-VSWNSMLTG 235
               +  K+ G    +     ++ +  R G + EA   + +LE K + + W ++L+ 
Sbjct: 353 GYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSA 409


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/601 (38%), Positives = 344/601 (57%), Gaps = 43/601 (7%)

Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN--TLMDMYAKCCCVNYMGRVFYQMTAQ 325
           +S+   L  LL   ++HA  I  GF     I +   L  ++ KC   +    VF      
Sbjct: 59  LSSCKHLNPLL---QIHAQIIVSGFKHHHSITHLINLYSLFHKC---DLARSVFDSTPNP 112

Query: 326 DFISWTTIIAGYAQNNCHLKALELFR-TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
             I W ++I  Y ++  + +ALE++   V+  GL+ DV I   ++   S +  + + +E+
Sbjct: 113 SRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREV 172

Query: 385 HGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLAN 444
              + ++   D+V  NA++    +  +   +R VF+ +  +D VSW +M++ Y HNG   
Sbjct: 173 FDKMPKR---DVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFV 229

Query: 445 EALELF----------------YLMN----EA----------NVESDSITLVSALSAASS 474
           E LELF                Y+ N    EA          N   +S+T VS L AA+ 
Sbjct: 230 EVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAY 289

Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
           L+  ++G   +  II+ GF     V +SL+DMYA+CG LD + K+FN +  KD + W +M
Sbjct: 290 LAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAM 349

Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
           ++   +HG G  AI LF  M+      D ++F+++L AC H+GL+ EG+K    M   Y 
Sbjct: 350 LSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYH 409

Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
           + P  EHYAC+VDLLGRA   +E   F++ M +EP A VW ALLG+CR+HSN +LGE+  
Sbjct: 410 IKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVAL 469

Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
             L++L+P NP ++V++S+++A S +W D  + R +M   GLKKTPG SW+E+ NK+H+F
Sbjct: 470 DHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAF 529

Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
              DKSH + + ++     + EK+E+  GYV     VL NVEEE+K   LY HSERLAI 
Sbjct: 530 RVGDKSHPQLESMHLLWNTLLEKMEKI-GYVPDRSCVLQNVEEEDKEMFLYSHSERLAIT 588

Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
           + +L +  GS I+I KNLRVC DCH+  K +S++  R ++VRDA RFHHFE G+CSC DY
Sbjct: 589 FALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDY 648

Query: 835 W 835
           W
Sbjct: 649 W 649



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 210/433 (48%), Gaps = 46/433 (10%)

Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
           ++IHA  + SG      + + LI +Y+   K   A  V     N   + WNSM+  + ++
Sbjct: 69  LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 127

Query: 240 DLYCKAMQ-FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
             Y +A++ ++  ++  G + D       V    ++G+L   +E+     K+    D+  
Sbjct: 128 KQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR----DVVA 183

Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
            N ++   ++        RVF QM  QD +SW T++AGYA N C ++ LELF  ++L  +
Sbjct: 184 WNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 243

Query: 359 DADVMIIG------------------------------SVLMACSGLKCMSQTKEIHGYI 388
             +V+I                                SVL A + L    +    H  I
Sbjct: 244 TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACI 303

Query: 389 IRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
           I+ G LS+ ++ N+++D+Y KCG +DYS  +F  ++ KD VSW +M+S Y  +G  + A+
Sbjct: 304 IQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAI 363

Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVD 505
            LF LM E+ V+ DS++ VS LSA     ++++G+++   +  K ++++  +   + +VD
Sbjct: 364 ALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDK-YHIKPDLEHYACMVD 422

Query: 506 MYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAESFAP 561
           +  R G  D        +  + D  +W +++ +  +H     G+VA+D   K+E  +  P
Sbjct: 423 LLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN--P 480

Query: 562 DHITFLALLYACS 574
            H   L+ +YA S
Sbjct: 481 AHFVVLSSIYAQS 493



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 127/559 (22%), Positives = 235/559 (42%), Gaps = 106/559 (18%)

Query: 11  AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
           A  +FD     +   WN+M+ AY  + +    LE Y                C+++   +
Sbjct: 102 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYY---------------CMVEKGGL 146

Query: 71  LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
            +D+                   FI   LV MY+K  D ++AR++FD+M  K DVV WN+
Sbjct: 147 ERDV-------------------FIGAGLVDMYSKMGDLKRAREVFDKM-PKRDVVAWNA 186

Query: 131 IISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSG 190
           +I+  S S     A  +F +M                   +D S+ T+            
Sbjct: 187 MIAGLSQSEDPYVARRVFDQMVDQ----------------DDVSWGTM------------ 218

Query: 191 QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR 250
                      +A YA  G   E   +  +++   +V+WN ++  ++QN    +A+  F 
Sbjct: 219 -----------MAGYAHNGCFVEVLELFDKMK-LGNVTWNVIIAAYMQNGHAKEAISSFH 266

Query: 251 ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCC 310
           +++     P+ V  V+ + A+  L     G   HA  I+ GF+S+  +GN+L+DMYAKC 
Sbjct: 267 QMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCG 326

Query: 311 CVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLM 370
            ++Y  ++F +M  +D +SW  +++GYA +    +A+ LF  +Q   +  D +   SVL 
Sbjct: 327 QLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLS 386

Query: 371 ACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDV 427
           AC     + + ++I   +  K     DL     +VD+ G+ G  D +    + +    D 
Sbjct: 387 ACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDA 446

Query: 428 VSWTSMISS-YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
             W +++ S  +H+ +    + L +L+           ++S++ A S       G+  + 
Sbjct: 447 GVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQS-------GRWADA 499

Query: 487 FIIRKGFN---LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
              R   N   L+ +   S V++  +  A  + +K    +++  L LW +++        
Sbjct: 500 GKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHL-LWNTLLE------- 551

Query: 544 GKVAIDLFYKMEAESFAPD 562
                    KME   + PD
Sbjct: 552 ---------KMEKIGYVPD 561



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 4/234 (1%)

Query: 2   YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
           Y   G  ++  +LFDK+    V TWN ++ AY+ NG     + ++ +MR+     ++ TF
Sbjct: 222 YAHNGCFVEVLELFDKMKLGNV-TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 280

Query: 62  PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
             V+ A A L     G   H  +++ G+ S   + NSL+ MYAKC     + +LF+ M  
Sbjct: 281 VSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDH 340

Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
           K D V WN+++S Y+  G    A+ LF  MQ   +  ++ +FV+ L AC  +     G +
Sbjct: 341 K-DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRK 399

Query: 182 I-HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
           I H+ + K      +     ++ +  R G   E  G +  +    D+  W ++L
Sbjct: 400 IFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 453



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 15/142 (10%)

Query: 1   MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
           MY KCG +  +E+LF+++  +   +WNAML  Y  +G   R +  +S M+   + +D+ +
Sbjct: 321 MYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVS 380

Query: 61  FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR- 118
           F  V+ AC     ++ G KI H +       S  + +   +  YA   D      LFD  
Sbjct: 381 FVSVLSACRHAGLVEEGRKIFHSM-------SDKYHIKPDLEHYACMVDLLGRAGLFDET 433

Query: 119 ------MGEKEDVVLWNSIISA 134
                 M  + D  +W +++ +
Sbjct: 434 LGFIKVMPVEPDAGVWGALLGS 455


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 244/798 (30%), Positives = 400/798 (50%), Gaps = 113/798 (14%)

Query: 149 REMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
           R    + L+ N Y     L + +D +  +L   +HA  + SG   + +  N L+ MY + 
Sbjct: 2   RNALDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKS 61

Query: 209 GKMTEAAGVLYQLEN---------------------------------KDSVSWNSMLTG 235
             +  A  +  ++ N                                 +DSV +N+M+TG
Sbjct: 62  SNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITG 121

Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR-LGNLLNGKELHAYAIKQGF-- 292
           +  N     A++ FR ++    +PD     + +SA    +GN     ++H   +K G   
Sbjct: 122 YAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGC 181

Query: 293 VSDLQIGNTLMDMYAK--------CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN--- 341
           VS   + N L+ +Y K        C  +    ++F +M  +D ++WTT+I GY +N+   
Sbjct: 182 VSS-SVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLN 240

Query: 342 ----------------------------CHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
                                       C  +AL L R ++  G+  D +   +++ AC+
Sbjct: 241 GAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACA 300

Query: 374 GLKCMSQTKEIHGYIIRKGLSD-----LVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
            +      K++H YI++  L+      L + NA++ +Y K   +D +R +F ++  ++++
Sbjct: 301 NVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNII 360

Query: 429 SWTSMISSYVH-------------------------------NGLANEALELFYLMNEAN 457
           +W +++S YV+                               NG  +E L+LF  M    
Sbjct: 361 TWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDG 420

Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
            E        AL+A S L  L+ G++L+  ++  G+    SV ++++ MYA+CG ++ A 
Sbjct: 421 FEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAE 480

Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
            VF  + + DL+ W SMI A G HG G  AI+LF +M  E   PD ITFL +L ACSH+G
Sbjct: 481 SVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAG 540

Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCAL 637
           L+ +G+ +   M   Y + P  +HYA +VDL  RA     A   + SM  +P A VW AL
Sbjct: 541 LVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEAL 600

Query: 638 LGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLK 697
           L  CR+H N +LG   A++L +L P N G YVL+SN++A   +W DV +VR  MR   ++
Sbjct: 601 LAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVR 660

Query: 698 KTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEE 757
           K P  SWIE+ NK+H F+  D  H E   +Y+ L ++  ++++  GY+  T+FVLH++E 
Sbjct: 661 KEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKL-GYIPDTKFVLHDMEY 719

Query: 758 EEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRD 817
           E+K   L  HSE+LA+ +G++K    + +R+ KN+R+C DCH+  K +S++  RE++VRD
Sbjct: 720 EQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRD 779

Query: 818 ANRFHHFEAGVCSCGDYW 835
             RFHHF+ G CSC DYW
Sbjct: 780 RKRFHHFKNGDCSCRDYW 797



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 149/571 (26%), Positives = 256/571 (44%), Gaps = 117/571 (20%)

Query: 1   MYGKCGSVLDAEQLF------DKVSQRTVFT---------------------------WN 27
           MY K  +V+ A QLF      D +++ T+ T                           +N
Sbjct: 57  MYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYN 116

Query: 28  AMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML--KDLDCGAKIHGLVL 85
           AM+  Y  NG+    LE +  MR      D FTF  V+ A  +    +  CG ++H  V+
Sbjct: 117 AMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCG-QMHCAVV 175

Query: 86  KCGYDS-TDFIVNSLVAMYAK--------CYDFRKARQLFDRMGEKEDVV---------- 126
           K G    +  ++N+L+++Y K        C     AR+LFD M +++++           
Sbjct: 176 KTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVR 235

Query: 127 --------------------LWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAA 166
                                WN++IS Y   G   EAL L R+M+ +G+  +  T+   
Sbjct: 236 NDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTI 295

Query: 167 LQACEDSSFETLGMEIHAATVKSGQNLQ----VYVANALIAMYARCGKMTEAAGVLYQLE 222
           + AC +     +G ++HA  +K+  N      + V+NALI +Y +  K+ EA  + Y + 
Sbjct: 296 ISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMP 355

Query: 223 NKDSVSWNSMLTGFV-------------------------------QNDLYCKAMQFFRE 251
            ++ ++WN++L+G+V                               QN    + ++ F++
Sbjct: 356 VRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQ 415

Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
           ++  G +P       A++A   LG L NG++LHA  +  G+ S L +GN ++ MYAKC  
Sbjct: 416 MRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGV 475

Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
           V     VF  M + D +SW ++IA   Q+   +KA+ELF  +  EG+  D +   +VL A
Sbjct: 476 VEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTA 535

Query: 372 CSGLKCMSQTKEIHGYIIRK-GLSDLVILNA-IVDVYGKCGNIDYSRNVFESIESKDVVS 429
           CS    + + +     ++   G++      A +VD++ + G   Y+R V +S+ SK    
Sbjct: 536 CSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAP 595

Query: 430 -WTSMISSYVHNG---LANEALE-LFYLMNE 455
            W ++++    +G   L  EA E LF LM +
Sbjct: 596 VWEALLAGCRIHGNMDLGIEAAEQLFKLMPQ 626


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.136    0.407 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,319,314,183
Number of Sequences: 23463169
Number of extensions: 499413412
Number of successful extensions: 1380804
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7739
Number of HSP's successfully gapped in prelim test: 3431
Number of HSP's that attempted gapping in prelim test: 1153342
Number of HSP's gapped (non-prelim): 72184
length of query: 835
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 684
effective length of database: 8,816,256,848
effective search space: 6030319684032
effective search space used: 6030319684032
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)