BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043955
(835 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/836 (59%), Positives = 645/836 (77%), Gaps = 1/836 (0%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MYGKCGS+ DAE++FD++ RT F WN M+GAYVSNGEP L Y MRV G+ + +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
FP ++KACA L+D+ G+++H L++K GY ST FIVN+LV+MYAK D AR+LFD
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
EK D VLWNSI+S+YS SG+ LE L LFREM G N+YT V+AL AC+ S+ LG
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 181 EIHAATVKSG-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
EIHA+ +KS + ++YV NALIAMY RCGKM +A +L Q+ N D V+WNS++ G+VQN
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
+Y +A++FF ++ AG K D+V + ++ASGRL NLL G ELHAY IK G+ S+LQ+G
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
NTL+DMY+KC YMGR F +M +D ISWTT+IAGYAQN+CH++ALELFR V + ++
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484
Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
D MI+GS+L A S LK M KEIH +I+RKGL D VI N +VDVYGKC N+ Y+ VF
Sbjct: 485 IDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVF 544
Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
ESI+ KDVVSWTSMISS NG +EA+ELF M E + +DS+ L+ LSAA+SLS L
Sbjct: 545 ESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALN 604
Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
KG+E++ +++RKGF LEGS+A ++VDMYA CG L A VF+ ++ K L+ +TSMINA G
Sbjct: 605 KGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYG 664
Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
+HG GK A++LF KM E+ +PDHI+FLALLYACSH+GL++EG+ FL+IM +Y+L+PWP
Sbjct: 665 MHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWP 724
Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
EHY CLVD+LGRAN + EA++FV+ M+ EPTAEVWCALL ACR HS KE+GEI A++LLE
Sbjct: 725 EHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE 784
Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
L+P NPGN VL+SNVFA +W DVE+VR +M+ SG++K PG SWIE+ K+H F ARDK
Sbjct: 785 LEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDK 844
Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
SH ES EIY+KL+E+T KLERE GYVA T+FVLHNV+E EKVQML+GHSER+AIAYG+L+
Sbjct: 845 SHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLR 904
Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
+ + + +RITKNLRVC DCH+FCKLVS+LF R++V+RDANRFHHFE+G+CSCGD W
Sbjct: 905 TPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 167/546 (30%), Positives = 287/546 (52%), Gaps = 6/546 (1%)
Query: 44 ETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYD-STDFIVNSLVAM 102
E + R+ V + F V++ C + + G ++H + K DF+ LV M
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125
Query: 103 YAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYT 162
Y KC A ++FD M ++ WN++I AY ++G+ AL L+ M+ G+ +
Sbjct: 126 YGKCGSLDDAEKVFDEMPDR-TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 163 FVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE 222
F A L+AC G E+H+ VK G + ++ NAL++MYA+ ++ A + +
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 223 NK-DSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
K D+V WNS+L+ + + + ++ FRE+ G P+ V+A++A GK
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 282 ELHAYAIKQG-FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
E+HA +K S+L + N L+ MY +C + R+ QM D ++W ++I GY QN
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
+ +ALE F + G +D + + S++ A L + E+H Y+I+ G S+L +
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424
Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
N ++D+Y KC Y F + KD++SWT++I+ Y N EALELF + + +E
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484
Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKV 519
D + L S L A+S L + KE++ I+RKG L+ + + LVD+Y +C + A +V
Sbjct: 485 IDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRV 543
Query: 520 FNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLI 579
F ++ KD++ WTSMI+++ L+G A++LF +M + D + L +L A + +
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSAL 603
Query: 580 NEGKKF 585
N+G++
Sbjct: 604 NKGREI 609
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 226/453 (49%), Gaps = 8/453 (1%)
Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTN---AYTFVAALQACEDSSFETLGMEIHAA 185
N + S C + + L QR+ + N F L+ C + G ++H+
Sbjct: 47 NQPVQVPSPKLACFDGV-LTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSR 105
Query: 186 TVKSGQNLQV-YVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
K+ + ++ ++A L+ MY +CG + +A V ++ ++ + +WN+M+ +V N
Sbjct: 106 IFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPAS 165
Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
A+ + ++ G + A +L ++ +G ELH+ +K G+ S I N L+
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225
Query: 305 MYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
MYAK ++ R+F + D + W +I++ Y+ + L+ LELFR + + G +
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285
Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL--SDLVILNAIVDVYGKCGNIDYSRNVFES 421
I S L AC G KEIH +++ S+L + NA++ +Y +CG + + +
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG 481
+ + DVV+W S+I YV N + EALE F M A +SD +++ S ++A+ LS L G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405
Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
EL+ ++I+ G++ V ++L+DMY++C + F + KDLI WT++I +
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
A++LF + + D + ++L A S
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 141/285 (49%), Gaps = 9/285 (3%)
Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVIL-NAIVDV 405
E F+ + + ++ V VL C + +SQ +++H I + S +L L +V +
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125
Query: 406 YGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITL 465
YGKCG++D + VF+ + + +W +MI +YV NG AL L++ M V +
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
+ L A + L ++ G EL+ +++ G++ G + ++LV MYA+ L A ++F+ Q
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 526 K-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
K D +LW S++++ G+ ++LF +M AP+ T ++ L AC GK+
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 585 F-LEIMRCDYQLDPWPEHYAC--LVDLLGRANHLEEAYQFVRSMQ 626
+++ E Y C L+ + R + +A + +R M
Sbjct: 306 IHASVLKSSTHSS---ELYVCNALIAMYTRCGKMPQAERILRQMN 347
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 610 bits (1574), Expect = e-173, Method: Compositional matrix adjust.
Identities = 323/850 (38%), Positives = 518/850 (60%), Gaps = 27/850 (3%)
Query: 7 SVLDAEQLFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
+V A +F +SQ R+ W +L + V + + TY M VLGI D + FP ++
Sbjct: 47 AVSGAPSIF--ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALL 104
Query: 66 KACAMLKDLDCGAKIHGLVLKCGY--DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
KA A L+D++ G +IH V K GY DS + N+LV +Y KC DF ++FDR+ E+
Sbjct: 105 KAVADLQDMELGKQIHAHVYKFGYGVDSVT-VANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE---TLGM 180
V WNS+IS+ + + AL FR M + +++T V+ + AC + +G
Sbjct: 164 QVS-WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
++HA ++ G+ L ++ N L+AMY + GK+ + +L +D V+WN++L+ QN+
Sbjct: 223 QVHAYGLRKGE-LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ-IG 299
+A+++ RE+ G +PD+ + + A L L GKELHAYA+K G + + +G
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GL 358
+ L+DMY C V RVF M + W +IAGY+QN +AL LF ++ GL
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
A+ + V+ AC S+ + IHG+++++GL D + N ++D+Y + G ID +
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLM-----------NEANVESDSITLV 466
+F +E +D+V+W +MI+ YV + +AL L + M + +++ +SITL+
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
+ L + ++LS L KGKE++ + I+ + +V S+LVDMYA+CG L ++ KVF+ + K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
++I W +I A G+HG G+ AIDL M + P+ +TF+++ ACSHSG+++EG +
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE-PTAEVWCALLGACRVHS 645
+M+ DY ++P +HYAC+VDLLGRA ++EAYQ + M + A W +LLGA R+H+
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701
Query: 646 NKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
N E+GEI A+ L++L+P +YVL++N+++++ W +VR M+ G++K PG SWI
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
E G+++H F+A D SH +S+++ L + E++ +E GYV T VLHNVEE+EK +L
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE-GYVPDTSCVLHNVEEDEKEILLC 820
Query: 766 GHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFE 825
GHSE+LAIA+G+L ++ G++IR+ KNLRVC DCH K +S++ RE+++RD RFH F+
Sbjct: 821 GHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFK 880
Query: 826 AGVCSCGDYW 835
G CSCGDYW
Sbjct: 881 NGTCSCGDYW 890
Score = 258 bits (658), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/615 (27%), Positives = 314/615 (51%), Gaps = 33/615 (5%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y KCG ++FD++S+R +WN+++ + S + LE + M + +FT
Sbjct: 142 LYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 201
Query: 61 FPCVIKACA---MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
V+ AC+ M + L G ++H L+ G + FI+N+LVAMY K ++ L
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLG 260
Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
G + D+V WN+++S+ + Q LEAL REM G+ + +T + L AC
Sbjct: 261 SFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319
Query: 178 LGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
G E+HA +K+G + +V +AL+ MY C ++ V + ++ WN+M+ G+
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379
Query: 237 VQNDLYCKAMQFFREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
QN+ +A+ F + + AG + V A R G + +H + +K+G D
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439
Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ- 354
+ NTLMDMY++ ++ R+F +M +D ++W T+I GY + H AL L +Q
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 355 LE----------GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIV 403
LE L + + + ++L +C+ L +++ KEIH Y I+ L +D+ + +A+V
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559
Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
D+Y KCG + SR VF+ I K+V++W +I +Y +G EA++L +M V+ + +
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619
Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFN 521
T +S +A S ++ +G + ++++ + +E S + +VD+ R G + A ++ N
Sbjct: 620 TFISVFAACSHSGMVDEGLRI-FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 678
Query: 522 CVQTKDLI---LWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
+ +D W+S++ A+ +H G++A ++E H LA +Y S
Sbjct: 679 -MMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN--VASHYVLLANIY--SS 733
Query: 576 SGLINEGKKFLEIMR 590
+GL ++ + M+
Sbjct: 734 AGLWDKATEVRRNMK 748
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 609 bits (1570), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/844 (38%), Positives = 496/844 (58%), Gaps = 11/844 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
MY CGS D+ +FD + + +F WNA++ +Y N VLET+ M + D F
Sbjct: 129 MYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHF 188
Query: 60 TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
T+PCVIKACA + D+ G +HGLV+K G F+ N+LV+ Y A QLFD M
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV----GLVTNAYTFVAALQACEDSSF 175
E+ ++V WNS+I +S +G E+ L EM + + T V L C
Sbjct: 249 PER-NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
LG +H VK + ++ + NAL+ MY++CG +T A + NK+ VSWN+M+ G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 236 FVQNDLYCKAMQFFRELQGAGQ--KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
F R++ G+ K D+V +NAV L + KELH Y++KQ FV
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
+ + N + YAKC ++Y RVF+ + ++ SW +I G+AQ+N +L+ +
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 487
Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNI 412
++ GL D + S+L ACS LK + KE+HG+IIR L DL + +++ +Y CG +
Sbjct: 488 KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 547
Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
+ +F+++E K +VSW ++I+ Y+ NG + AL +F M ++ I+++ A
Sbjct: 548 CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607
Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWT 532
S L L+ G+E + + ++ + +A SL+DMYA+ G++ ++KVFN ++ K W
Sbjct: 608 SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 667
Query: 533 SMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCD 592
+MI G+HG K AI LF +M+ PD +TFL +L AC+HSGLI+EG ++L+ M+
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727
Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFV-RSMQIEPTAEVWCALLGACRVHSNKELGE 651
+ L P +HYAC++D+LGRA L++A + V M E +W +LL +CR+H N E+GE
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787
Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
VA KL EL+P P NYVL+SN++A KW+DV +VR RM L+K G SWIE+ K+
Sbjct: 788 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKV 847
Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
SF+ ++ +EI K L I E + GY T V H++ EEEK++ L GHSE+L
Sbjct: 848 FSFVVGERFLDGFEEI-KSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKL 906
Query: 772 AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
A+ YG++K++EG+ IR+ KNLR+CVDCH+ KL+S++ RE+VVRD RFHHF+ GVCSC
Sbjct: 907 ALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSC 966
Query: 832 GDYW 835
GDYW
Sbjct: 967 GDYW 970
Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 154/534 (28%), Positives = 261/534 (48%), Gaps = 15/534 (2%)
Query: 55 SVDAF-----TFPCVIKACAMLKDLDCGAKIHGLVL-KCGYDSTDFIVNSLVAMYAKCYD 108
S DAF +++A KD++ G KIH LV + D + ++ MYA C
Sbjct: 76 SSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGS 135
Query: 109 FRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAAL 167
+R +FD + K ++ WN++IS+YS + E L F EM L+ + +T+ +
Sbjct: 136 PDDSRFVFDALRSK-NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVI 194
Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSV 227
+AC S +G+ +H VK+G V+V NAL++ Y G +T+A + + ++ V
Sbjct: 195 KACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLV 254
Query: 228 SWNSMLTGFVQNDLYCKAMQFFREL---QGAGQ-KPDQVCTVNAVSASGRLGNLLNGKEL 283
SWNSM+ F N ++ E+ G G PD V + R + GK +
Sbjct: 255 SWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 314
Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
H +A+K +L + N LMDMY+KC C+ +F ++ +SW T++ G++
Sbjct: 315 HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDT 374
Query: 344 LKALELFRTVQLEGLD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILN 400
++ R + G D AD + I + + C + KE+H Y +++ + + ++ N
Sbjct: 375 HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN 434
Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVES 460
A V Y KCG++ Y++ VF I SK V SW ++I + + +L+ M + +
Sbjct: 435 AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLP 494
Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
DS T+ S LSA S L L+ GKE++GFIIR + V S++ +Y CG L +F
Sbjct: 495 DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACS 574
+ ++ K L+ W ++I +G A+ +F +M I+ + + ACS
Sbjct: 555 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 201/392 (51%), Gaps = 8/392 (2%)
Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KP 259
+I MYA CG ++ V L +K+ WN++++ + +N+LY + ++ F E+ P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 260 DQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVF 319
D + A + ++ G +H +K G V D+ +GN L+ Y V ++F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 320 YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD----ADVMIIGSVLMACSGL 375
M ++ +SW ++I ++ N ++ L + E D DV + +VL C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 376 KCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
+ + K +HG+ ++ L +LV+ NA++D+Y KCG I ++ +F+ +K+VVSW +M+
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 435 SSYVHNGLANEALELF--YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
+ G + ++ L +V++D +T+++A+ S L KEL+ + +++
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
F VA++ V YA+CG+L A +VF+ +++K + W ++I + ++++D
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKK 584
+M+ PD T +LL ACS + GK+
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 125/250 (50%), Gaps = 16/250 (6%)
Query: 350 FRTVQL------EGLDADVMI---IGSVLMACSGLKCMSQTKEIHGYII--RKGLSDLVI 398
FRTVQ DA +++ +G +L A K + ++IH + + +D V+
Sbjct: 63 FRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL 122
Query: 399 LNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY-LMNEAN 457
I+ +Y CG+ D SR VF+++ SK++ W ++ISSY N L +E LE F +++ +
Sbjct: 123 CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTD 182
Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
+ D T + A + +S + G ++G +++ G + V ++LV Y G + A
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 242
Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE----SFAPDHITFLALLYAC 573
++F+ + ++L+ W SMI +G + + L +M E +F PD T + +L C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 574 SHSGLINEGK 583
+ I GK
Sbjct: 303 AREREIGLGK 312
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 585 bits (1508), Expect = e-166, Method: Compositional matrix adjust.
Identities = 304/836 (36%), Positives = 485/836 (58%), Gaps = 3/836 (0%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y + G V A ++FD + + +W AM+ N + + M VLGI +
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
F V+ AC ++ L+ G ++HGLVLK G+ S ++ N+LV++Y + A +F M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
++ D V +N++I+ S G +A+ LF+ M GL ++ T + + AC G
Sbjct: 351 QR-DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
++HA T K G + AL+ +YA+C + A + E ++ V WN ML + D
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
+ + FR++Q P+Q + + RLG+L G+++H+ IK F + + +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
L+DMYAK ++ + + +D +SWTT+IAGY Q N KAL FR + G+ +
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
D + + + + AC+GL+ + + ++IH G S DL NA+V +Y +CG I+ S F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
E E+ D ++W +++S + +G EAL +F MN +++++ T SA+ AAS + +K
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
+GK+++ I + G++ E V ++L+ MYA+CG++ A K F V TK+ + W ++INA
Sbjct: 710 QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 769
Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWP 599
HG G A+D F +M + P+H+T + +L ACSH GL+++G + E M +Y L P P
Sbjct: 770 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829
Query: 600 EHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLE 659
EHY C+VD+L RA L A +F++ M I+P A VW LL AC VH N E+GE A LLE
Sbjct: 830 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889
Query: 660 LDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDK 719
L+P + YVL+SN++A S+KW + R +M+ G+KK PG SWIE+ N IHSF D+
Sbjct: 890 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 949
Query: 720 SHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLK 779
+H +DEI++ ++T++ E GYV +L+ ++ E+K +++ HSE+LAI++G+L
Sbjct: 950 NHPLADEIHEYFQDLTKR-ASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1008
Query: 780 STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
I + KNLRVC DCH++ K VS++ RE++VRDA RFHHFE G CSC DYW
Sbjct: 1009 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 270 bits (689), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 170/643 (26%), Positives = 320/643 (49%), Gaps = 9/643 (1%)
Query: 6 GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
G + A ++FD++ +RT+FTWN M+ S V + RM ++ + TF V+
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 66 KAC-AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
+AC D +IH +L G + + N L+ +Y++ AR++FD + K D
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-D 252
Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
W ++IS S + EA+ LF +M +G++ Y F + L AC+ +G ++H
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
+K G + YV NAL+++Y G + A + + +D+V++N+++ G Q K
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372
Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
AM+ F+ + G +PD + V A G L G++LHAY K GF S+ +I L++
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 432
Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
+YAKC + F + ++ + W ++ Y + + +FR +Q+E + +
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIE 423
S+L C L + ++IH II+ + + + ++D+Y K G +D + ++
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
KDVVSWT+MI+ Y ++AL F M + + SD + L +A+SA + L LK+G++
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
++ GF+ + ++LV +Y+RCG ++ + F + D I W ++++ G
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM-RCDYQLDPWPEHY 602
+ A+ +F +M E ++ TF + + A S + + +GK+ ++ + Y D E
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY--DSETEVC 730
Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEV-WCALLGACRVH 644
L+ + + + +A + + +++ EV W A++ A H
Sbjct: 731 NALISMYAKCGSISDAEK--QFLEVSTKNEVSWNAIINAYSKH 771
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 203/744 (27%), Positives = 338/744 (45%), Gaps = 42/744 (5%)
Query: 17 KVSQRTVFTW--------NAMLGAYVSNGEPL---RVLETYSRMRVLGISVDAFTFPCVI 65
K+ RTVF A + Y+S E R+ +R GI + T ++
Sbjct: 36 KLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVENR----GIRPNHQTLKWLL 91
Query: 66 KACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
+ C LD G K+H +LK G DS + L Y D A ++FD M E+
Sbjct: 92 EGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT- 150
Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS--FETLGMEI 182
+ WN +I ++ E GLF M + N TF L+AC S F+ + +I
Sbjct: 151 IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE-QI 209
Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
HA + G V N LI +Y+R G + A V L KD SW +M++G +N+
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
+A++ F ++ G P + +SA ++ +L G++LH +K GF SD + N L
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADV 362
+ +Y + +F M+ +D +++ T+I G +Q KA+ELF+ + L+GL+ D
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 363 MIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFES 421
+ S+++ACS + + +++H Y + G S+ I A++++Y KC +I+ + + F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 422 IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE---SDSITLVSALSAASSLSIL 478
E ++VV W M+ +Y GL ++ F + + +E + T S L L L
Sbjct: 450 TEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
+ G++++ II+ F L V S L+DMYA+ G LD A + KD++ WT+MI
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
+ A+ F +M D + + AC+ + EG++ + C
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSD 625
Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV-WCALLGACRVHSNKELGEIVAKKL 657
LV L R +EE+Y + Q E + W AL+ + N E V ++
Sbjct: 626 LPFQNALVTLYSRCGKIEESY--LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Query: 658 LELDPGNPGNYVLISNVFAASR--KWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
N N+ S V AAS K +QV + + KT S E+ N + S
Sbjct: 684 NREGIDN-NNFTFGSAVKAASETANMKQGKQVH-----AVITKTGYDSETEVCNALISMY 737
Query: 716 ARDKSHSESDEIYKKLAEITEKLE 739
A+ S S+++ K+ E++ K E
Sbjct: 738 AKCGSISDAE---KQFLEVSTKNE 758
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 582 bits (1499), Expect = e-165, Method: Compositional matrix adjust.
Identities = 304/789 (38%), Positives = 485/789 (61%), Gaps = 18/789 (2%)
Query: 56 VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
+D T V++ CA K L G ++ + G+ + + L MY C D ++A ++
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
FD + + E + WN +++ + SG ++GLF++M G+ ++YTF +C SF
Sbjct: 152 FDEV-KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF-----SCVSKSF 205
Query: 176 ETL-----GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
+L G ++H +KSG + V N+L+A Y + ++ A V ++ +D +SWN
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 265
Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPD--QVCTVNAVSASGRLGNLLNGKELHAYAI 288
S++ G+V N L K + F ++ +G + D + +V A A RL +L G+ +H+ +
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGV 323
Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
K F + + NTL+DMY+KC ++ VF +M+ + +S+T++IAGYA+ +A++
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYG 407
LF ++ EG+ DV + +VL C+ + + + K +H +I L D+ + NA++D+Y
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443
Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLV 466
KCG++ + VF + KD++SW ++I Y N ANEAL LF L+ E D T+
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
L A +SLS KG+E++G+I+R G+ + VA+SLVDMYA+CGAL +A+ +F+ + +K
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK 563
Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
DL+ WT MI G+HG GK AI LF +M D I+F++LLYACSHSGL++EG +F
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 623
Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
IMR + +++P EHYAC+VD+L R L +AY+F+ +M I P A +W ALL CR+H +
Sbjct: 624 NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHD 683
Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
+L E VA+K+ EL+P N G YVL++N++A + KW+ V+++R R+ GL+K PG SWIE
Sbjct: 684 VKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Query: 707 IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
I +++ F+A D S+ E++ I L ++ ++ E GY T++ L + EE EK + L G
Sbjct: 744 IKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEE-GYSPLTKYALIDAEEMEKEEALCG 802
Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
HSE+LA+A G++ S G +IR+TKNLRVC DCH K +S+L RE+V+RD+NRFH F+
Sbjct: 803 HSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKD 862
Query: 827 GVCSCGDYW 835
G CSC +W
Sbjct: 863 GHCSCRGFW 871
Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/579 (33%), Positives = 312/579 (53%), Gaps = 10/579 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY CG + +A ++FD+V WN ++ +G+ + + +M G+ +D++T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
F CV K+ + L+ + G ++HG +LK G+ + + NSLVA Y K AR++FD M
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
E+ DV+ WNSII+ Y ++G + L +F +M G+ + T V+ C DS +LG
Sbjct: 258 ER-DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
+H+ VK+ + + N L+ MY++CG + A V ++ ++ VS+ SM+ G+ +
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAV-SASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
L +A++ F E++ G PD V TV AV + R L GK +H + + D+ +
Sbjct: 377 LAGEAVKLFEEMEEEGISPD-VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-L 358
N LMDMYAKC + VF +M +D ISW TII GY++N +AL LF + E
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRN 417
D + VL AC+ L + +EIHGYI+R G SD + N++VD+Y KCG + +
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 555
Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
+F+ I SKD+VSWT MI+ Y +G EA+ LF M +A +E+D I+ VS L A S +
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 615
Query: 478 LKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANK-VFNCVQTKDLILWTSM 534
+ +G I+R +E +V + +VDM AR G L A + + N D +W ++
Sbjct: 616 VDEGWRFFN-IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Query: 535 INANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYA 572
+ +H K+A + K+ E E + +A +YA
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYA 713
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 131/270 (48%), Gaps = 6/270 (2%)
Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
D D + SVL C+ K + KE+ +I G D + + + +Y CG++ +
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
VF+ ++ + + W +++ +G + ++ LF M + VE DS T + SSL
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
+ G++L+GFI++ GF SV +SLV Y + +D A KVF+ + +D+I W S+IN
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF--LEIMRCDYQL 595
+G + + +F +M D T +++ C+ S LI+ G+ + + C +
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSM 625
D + L+D+ + L+ A R M
Sbjct: 331 DRFCN---TLLDMYSKCGDLDSAKAVFREM 357
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 575 bits (1482), Expect = e-163, Method: Compositional matrix adjust.
Identities = 310/826 (37%), Positives = 508/826 (61%), Gaps = 8/826 (0%)
Query: 14 LFDKVSQ-RTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
+F +VS + V+ WN+++ A+ NG LE Y ++R +S D +TFP VIKACA L
Sbjct: 61 VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 73 DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
D + G ++ +L G++S F+ N+LV MY++ +ARQ+FD M + D+V WNS+I
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLI 179
Query: 133 SAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQN 192
S YS+ G EAL ++ E++ +V +++T + L A + G +H +KSG N
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 193 LQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL 252
V V N L+AMY + + T+A V +++ +DSVS+N+M+ G+++ ++ ++++ F L
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--L 297
Query: 253 QGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
+ Q KPD + + + A G L +L K ++ Y +K GFV + + N L+D+YAKC
Sbjct: 298 ENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357
Query: 312 VNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMA 371
+ VF M +D +SW +II+GY Q+ ++A++LF+ + + AD + ++
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 372 CSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
+ L + K +H I+ G+ DL + NA++D+Y KCG + S +F S+ + D V+W
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTW 477
Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
++IS+ V G L++ M ++ V D T + L +SL+ + GKE++ ++R
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR 537
Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDL 550
G+ E + ++L++MY++CG L+ +++VF + +D++ WT MI A G++G G+ A++
Sbjct: 538 FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALET 597
Query: 551 FYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLG 610
F ME PD + F+A++YACSHSGL++EG E M+ Y++DP EHYAC+VDLL
Sbjct: 598 FADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLS 657
Query: 611 RANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVL 670
R+ + +A +F+++M I+P A +W ++L ACR + E E V+++++EL+P +PG +L
Sbjct: 658 RSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSIL 717
Query: 671 ISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKK 730
SN +AA RKW V +R ++ + K PG SWIE+G +H F + D S +S+ IYK
Sbjct: 718 ASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKS 777
Query: 731 LAEITEKLEREGGYVAQTQFVLHNV-EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRIT 789
L EI L + GY+ + V N+ EEEEK +++ GHSERLAIA+G+L + G+ +++
Sbjct: 778 L-EILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVM 836
Query: 790 KNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
KNLRVC DCH KL+S++ GRE++VRDANRFH F+ G CSC D W
Sbjct: 837 KNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 280 bits (717), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 291/527 (55%), Gaps = 8/527 (1%)
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
P + +A + +L+ +IH LV+ G DS+DF L+ Y+ + + +F R+
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
++V LWNSII A+S +G EAL + +++ + + YTF + ++AC +G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
++ + G ++V NAL+ MY+R G +T A V ++ +D VSWNS+++G+ +
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
Y +A++ + EL+ + PD + + A G L + G+ LH +A+K G S + + N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD-- 359
L+ MY K RVF +M +D +S+ T+I GY + +++ +F LE LD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF----LENLDQF 303
Query: 360 -ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
D++ + SVL AC L+ +S K I+ Y+++ G + + N ++DVY KCG++ +R+
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
VF S+E KD VSW S+IS Y+ +G EA++LF +M ++D IT + +S ++ L+
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
LK GK L+ I+ G ++ SV+++L+DMYA+CG + + K+F+ + T D + W ++I+A
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483
Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
G + + +M PD TFL L C+ GK+
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530
Score = 244 bits (622), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 280/542 (51%), Gaps = 9/542 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY + G + A Q+FD++ R + +WN+++ Y S+G LE Y ++ I D+FT
Sbjct: 150 MYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFT 209
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
V+ A L + G +HG LK G +S + N LVAMY K AR++FD M
Sbjct: 210 VSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEM- 268
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
+ D V +N++I Y E++ +F E + T + L+AC +L
Sbjct: 269 DVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAK 327
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
I+ +K+G L+ V N LI +YA+CG M A V +E KD+VSWNS+++G++Q+
Sbjct: 328 YIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSG 387
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
+AM+ F+ + ++ D + + +S S RL +L GK LH+ IK G DL + N
Sbjct: 388 DLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN 447
Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
L+DMYAKC V ++F M D ++W T+I+ + L++ ++ +
Sbjct: 448 ALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVP 507
Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
D+ L C+ L KEIH ++R G S+L I NA++++Y KCG ++ S VF
Sbjct: 508 DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVF 567
Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
E + +DVV+WT MI +Y G +ALE F M ++ + DS+ ++ + A S ++
Sbjct: 568 ERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVD 627
Query: 480 KGKELNGF-IIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
+G L F ++ + ++ + + +VD+ +R + A + + K D +W S++
Sbjct: 628 EG--LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685
Query: 536 NA 537
A
Sbjct: 686 RA 687
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 547 bits (1409), Expect = e-154, Method: Compositional matrix adjust.
Identities = 290/745 (38%), Positives = 450/745 (60%), Gaps = 13/745 (1%)
Query: 95 IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFRE-MQR 153
I LV +Y + AR FD + + DV WN +IS Y +G E + F M
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHI-QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLS 146
Query: 154 VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
GL + TF + L+AC G +IH +K G VYVA +LI +Y+R +
Sbjct: 147 SGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGN 203
Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
A + ++ +D SWN+M++G+ Q+ +A+ L+ D V V+ +SA
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTE 259
Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
G+ G +H+Y+IK G S+L + N L+D+YA+ + +VF +M +D ISW +I
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319
Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG- 392
I Y N L+A+ LF+ ++L + D + + S+ S L + + + G+ +RKG
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 393 -LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
L D+ I NA+V +Y K G +D +R VF + + DV+SW ++IS Y NG A+EA+E++
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 452 LMNE-ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
+M E + ++ T VS L A S L++G +L+G +++ G L+ V +SL DMY +C
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499
Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
G L+ A +F + + + W ++I +G HG G+ A+ LF +M E PDHITF+ LL
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559
Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
ACSHSGL++EG+ E+M+ DY + P +HY C+VD+ GRA LE A +F++SM ++P
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619
Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
A +W ALL ACRVH N +LG+I ++ L E++P + G +VL+SN++A++ KW+ V+++R
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
G GL+KTPG S +E+ NK+ F +++H +E+Y++L + KL + GYV +F
Sbjct: 680 AHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL-KMIGYVPDHRF 738
Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
VL +VE++EK +L HSERLAIA+ ++ + + IRI KNLRVC DCHS K +S++
Sbjct: 739 VLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITE 798
Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
RE++VRD+NRFHHF+ GVCSCGDYW
Sbjct: 799 REIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 279 bits (714), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 178/580 (30%), Positives = 318/580 (54%), Gaps = 24/580 (4%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSR-MRVLGISVDAF 59
+Y G+V A FD + R V+ WN M+ Y G V+ +S M G++ D
Sbjct: 95 LYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYR 154
Query: 60 TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
TFP V+KAC + D G KIH L LK G+ ++ SL+ +Y++ AR LFD M
Sbjct: 155 TFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211
Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
+ D+ WN++IS Y SG EAL L ++ + ++ T V+ L AC ++ G
Sbjct: 212 PVR-DMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRG 266
Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
+ IH+ ++K G +++V+N LI +YA G++ + V ++ +D +SWNS++ + N
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG-FVSDLQI 298
+ +A+ F+E++ + +PD + ++ S +LG++ + + + +++G F+ D+ I
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 386
Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG- 357
GN ++ MYAK V+ VF + D ISW TII+GYAQN +A+E++ ++ EG
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 446
Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
+ A+ SVL ACS + Q ++HG +++ GL D+ ++ ++ D+YGKCG ++ +
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL 506
Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
++F I + V W ++I+ + +G +A+ LF M + V+ D IT V+ LSA S
Sbjct: 507 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566
Query: 477 ILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTS 533
++ +G+ +++ + + S+ +VDMY R G L+ A K + + D +W +
Sbjct: 567 LVDEGQWCFE-MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGA 625
Query: 534 MINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALL 570
+++A +HG GK+A + +++E P+H+ + LL
Sbjct: 626 LLSACRVHGNVDLGKIASEHLFEVE-----PEHVGYHVLL 660
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 534 bits (1376), Expect = e-150, Method: Compositional matrix adjust.
Identities = 281/786 (35%), Positives = 465/786 (59%), Gaps = 11/786 (1%)
Query: 54 ISVDAFTFPC--VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
I + + P +++ C+ LK+L +I LV K G F LV+++ + +
Sbjct: 31 IPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
A ++F+ + K +V L+++++ ++ +AL F M+ + Y F L+ C
Sbjct: 88 AARVFEPIDSKLNV-LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCG 146
Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
D + +G EIH VKSG +L ++ L MYA+C ++ EA V ++ +D VSWN+
Sbjct: 147 DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT 206
Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
++ G+ QN + A++ + + KP + V+ + A L + GKE+H YA++ G
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
F S + I L+DMYAKC + ++F M ++ +SW ++I Y QN +A+ +F+
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 352 TVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
+ EG+ DV ++G+ L AC+ L + + + IH + GL ++ ++N+++ +Y KC
Sbjct: 327 KMLDEGVKPTDVSVMGA-LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
+D + ++F ++S+ +VSW +MI + NG +AL F M V+ D+ T VS +
Sbjct: 386 KEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVI 445
Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
+A + LSI K ++G ++R + V ++LVDMYA+CGA+ IA +F+ + + +
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505
Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
W +MI+ G HG GK A++LF +M+ + P+ +TFL+++ ACSHSGL+ G K +M
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMM 565
Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
+ +Y ++ +HY +VDLLGRA L EA+ F+ M ++P V+ A+LGAC++H N
Sbjct: 566 KENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNF 625
Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
E A++L EL+P + G +VL++N++ A+ W+ V QVR+ M GL+KTPG S +EI N
Sbjct: 626 AEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKN 685
Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
++HSF + +H +S +IY L ++ + +E GYV T VL VE + K Q+L HSE
Sbjct: 686 EVHSFFSGSTAHPDSKKIYAFLEKLICHI-KEAGYVPDTNLVL-GVENDVKEQLLSTHSE 743
Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
+LAI++G+L +T G+ I + KNLRVC DCH+ K +S + GRE+VVRD RFHHF+ G C
Sbjct: 744 KLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGAC 803
Query: 830 SCGDYW 835
SCGDYW
Sbjct: 804 SCGDYW 809
Score = 278 bits (712), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/545 (29%), Positives = 294/545 (53%), Gaps = 6/545 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
++ + GSV +A ++F+ + + ++ ML + + + L+ + RMR + +
Sbjct: 78 LFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYN 137
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
F ++K C +L G +IHGL++K G+ F + L MYAKC +AR++FDRM
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
E+ D+V WN+I++ YS +G AL + + M L + T V+ L A ++G
Sbjct: 198 ER-DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGK 256
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
EIH ++SG + V ++ AL+ MYA+CG + A + + ++ VSWNSM+ +VQN+
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
+AM F+++ G KP V + A+ A LG+L G+ +H +++ G ++ + N
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
+L+ MY KC V+ +F ++ ++ +SW +I G+AQN + AL F ++ +
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP 436
Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
D SV+ A + L K IHG ++R L ++ + A+VD+Y KCG I +R +F
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
+ + + V +W +MI Y +G ALELF M + ++ + +T +S +SA S +++
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE 556
Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMIN 536
G + +++++ +++E S+ ++VD+ R G L+ A + K + ++ +M+
Sbjct: 557 AGLKC-FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 537 ANGLH 541
A +H
Sbjct: 616 ACQIH 620
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 531 bits (1369), Expect = e-150, Method: Compositional matrix adjust.
Identities = 293/840 (34%), Positives = 467/840 (55%), Gaps = 56/840 (6%)
Query: 46 YSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK 105
Y ++ + S T P I C + + IH +L G + + + + L++ Y
Sbjct: 17 YIKVSLFSTSAPEIT-PPFIHKCKTISQVKL---IHQKLLSFGILTLN-LTSHLISTYIS 71
Query: 106 CYDFRKARQLFDRMGEKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFV 164
A L R + V WNS+I +Y +G + L LF M + + YTF
Sbjct: 72 VGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFP 131
Query: 165 AALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK 224
+AC + S G HA ++ +G V+V NAL+AMY+RC +++A V ++
Sbjct: 132 FVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW 191
Query: 225 DSVSWNSMLTGFVQNDLYCKAMQFFRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKEL 283
D VSWNS++ + + A++ F + G +PD + VN + LG GK+L
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
H +A+ + ++ +GN L+DMYAKC ++ VF M+ +D +SW ++AGY+Q
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRF 311
Query: 344 LKALELFRTVQLEGLDADVMI-----------------------------------IGSV 368
A+ LF +Q E + DV+ + SV
Sbjct: 312 EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371
Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS--------DLVILNAIVDVYGKCGNIDYSRNVFE 420
L C+ + + KEIH Y I+ + + +++N ++D+Y KC +D +R +F+
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 421 SIESK--DVVSWTSMISSYVHNGLANEALELFYLMNEANVES--DSITLVSALSAASSLS 476
S+ K DVV+WT MI Y +G AN+ALEL M E + ++ ++ T+ AL A +SL+
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA 491
Query: 477 ILKKGKELNGFIIRKGFN-LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
L+ GK+++ + +R N + V++ L+DMYA+CG++ A VF+ + K+ + WTS++
Sbjct: 492 ALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLM 551
Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
G+HG G+ A+ +F +M F D +T L +LYACSHSG+I++G ++ M+ + +
Sbjct: 552 TGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGV 611
Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
P PEHYACLVDLLGRA L A + + M +EP VW A L CR+H ELGE A+
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAE 671
Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
K+ EL + G+Y L+SN++A + +WKDV ++R MR G+KK PG SW+E +F
Sbjct: 672 KITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFF 731
Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
DK+H + EIY+ L + +++ ++ GYV +T F LH+V++EEK +L+ HSE+LA+AY
Sbjct: 732 VGDKTHPHAKEIYQVLLDHMQRI-KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAY 790
Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
G+L + +G+ IRITKNLRVC DCH+ +SR+ ++++RD++RFHHF+ G CSC YW
Sbjct: 791 GILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 190/626 (30%), Positives = 307/626 (49%), Gaps = 59/626 (9%)
Query: 19 SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGA 78
S V+ WN+++ +Y NG + L + M L + D +TFP V KAC + + CG
Sbjct: 88 SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 79 KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSAS 138
H L L G+ S F+ N+LVAMY++C AR++FD M DVV WNSII +Y+
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM-SVWDVVSWNSIIESYAKL 206
Query: 139 GQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYV 197
G+ AL +F M G + T V L C +LG ++H V S ++V
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 198 ANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ---- 253
N L+ MYA+CG M EA V + KD VSWN+M+ G+ Q + A++ F ++Q
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 254 -------------------------------GAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
+G KP++V ++ +S +G L++GKE
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 283 LHAYAI-------KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ--DFISWTTI 333
+H YAI K G + + N L+DMYAKC V+ +F ++ + D ++WT +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 334 IAGYAQNNCHLKALELFRTVQLEGLD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIR- 390
I GY+Q+ KALEL + E + I L+AC+ L + K+IH Y +R
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 391 -KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
+ L + N ++D+Y KCG+I +R VF+++ +K+ V+WTS+++ Y +G EAL +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566
Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKE-LNGFIIRKGFNLEGSVASSLVDMYA 508
F M + D +TL+ L A S ++ +G E N G + + LVD+
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 509 RCGALDIANKVFNCVQTK-DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH---I 564
R G L+ A ++ + + ++W + ++ +H GKV + + + A +H
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH--GKVELGEYAAEKITELASNHDGSY 684
Query: 565 TFLALLYACSHSGLINEGKKFLEIMR 590
T L+ LYA ++G + + +MR
Sbjct: 685 TLLSNLYA--NAGRWKDVTRIRSLMR 708
Score = 189 bits (481), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 146/491 (29%), Positives = 229/491 (46%), Gaps = 62/491 (12%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAF 59
MY +C S+ DA ++FD++S V +WN+++ +Y G+P LE +SRM G D
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI 230
Query: 60 TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC------------- 106
T V+ CA L G ++H + F+ N LV MYAKC
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 107 --------------YD----FRKARQLFDRMGE---KEDVVLWNSIISAYSASGQCLEAL 145
Y F A +LF++M E K DVV W++ IS Y+ G EAL
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 146 GLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV-------KSGQNLQVYVA 198
G+ R+M G+ N T ++ L C G EIH + K+G + V
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI 410
Query: 199 NALIAMYARCGKMTEAAGVLYQLENK--DSVSWNSMLTGFVQNDLYCKAMQFFREL--QG 254
N LI MYA+C K+ A + L K D V+W M+ G+ Q+ KA++ E+ +
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIK-QGFVSDLQIGNTLMDMYAKCCCVN 313
+P+ A+ A L L GK++HAYA++ Q L + N L+DMYAKC ++
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
VF M A++ ++WT+++ GY + +AL +F ++ G D + + VL ACS
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
Query: 374 -------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE--SIES 424
G++ ++ K + G + G L VD+ G+ G ++ + + E +E
Sbjct: 591 HSGMIDQGMEYFNRMKTVFG--VSPGPEHYACL---VDLLGRAGRLNAALRLIEEMPMEP 645
Query: 425 KDVVSWTSMIS 435
VV W + +S
Sbjct: 646 PPVV-WVAFLS 655
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 6/173 (3%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KCGS+ DA +FD + + TW +++ Y +G L + MR +G +D T
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581
Query: 61 FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
V+ AC+ +D G + + + G LV + + A +L + M
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTN---AYTFVAALQA 169
+ V+W + +S G+ LG + + L +N +YT ++ L A
Sbjct: 642 PMEPPPVVWVAFLSCCRIHGKV--ELGEYAAEKITELASNHDGSYTLLSNLYA 692
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust.
Identities = 282/830 (33%), Positives = 478/830 (57%), Gaps = 10/830 (1%)
Query: 10 DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
+A LFDK R ++ ++L + +G + + LG+ +D F V+K A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 70 MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
L D G ++H +K G+ + SLV Y K +F+ R++FD M E+ +VV W
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER-NVVTWT 163
Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
++IS Y+ + E L LF MQ G N++TF AAL + G+++H VK+
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
G + + V+N+LI +Y +CG + +A + + E K V+WNSM++G+ N L +A+ F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
++ + + + + L L ++LH +K GF+ D I LM Y+KC
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 310 CCVNYMGRVFYQMT-AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSV 368
+ R+F ++ + +SWT +I+G+ QN+ +A++LF ++ +G+ + +
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 369 LMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDV 427
L A L +S + E+H +++ + A++D Y K G ++ + VF I+ KD+
Sbjct: 404 LTA---LPVISPS-EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 428 VSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILKKGKELNG 486
V+W++M++ Y G A+++F + + ++ + T S L+ A++ + + +GK+ +G
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 487 FIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKV 546
F I+ + V+S+L+ MYA+ G ++ A +VF + KDL+ W SMI+ HG+
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 547 AIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLV 606
A+D+F +M+ D +TF+ + AC+H+GL+ EG+K+ +IM D ++ P EH +C+V
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 607 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 666
DL RA LE+A + + +M + +W +L ACRVH ELG + A+K++ + P +
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSA 699
Query: 667 NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDE 726
YVL+SN++A S W++ +VR M +KK PG SWIE+ NK +SF+A D+SH D+
Sbjct: 700 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQ 759
Query: 727 IYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLI 786
IY KL +++ +L ++ GY T +VL ++++E K +L HSERLAIA+G++ + +GS +
Sbjct: 760 IYMKLEDLSTRL-KDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPL 818
Query: 787 RITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA-GVCSCGDYW 835
I KNLRVC DCH KL++++ RE+VVRD+NRFHHF + GVCSCGD+W
Sbjct: 819 LIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 272 bits (695), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 176/596 (29%), Positives = 308/596 (51%), Gaps = 17/596 (2%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y K + D ++FD++ +R V TW ++ Y N VL + RM+ G ++FTF
Sbjct: 138 YMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTF 197
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
+ A G ++H +V+K G D T + NSL+ +Y KC + RKAR LFD+ E
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKT-E 256
Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
+ VV WNS+IS Y+A+G LEALG+F M+ + + +F + ++ C + +
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQ 316
Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTGFVQND 240
+H + VK G + AL+ Y++C M +A + ++ + VSW +M++GF+QND
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
+A+ F E++ G +P++ ++A +++ E+HA +K + +G
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGT 432
Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
L+D Y K V +VF + +D ++W+ ++AGYAQ A+++F + G+
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492
Query: 361 DVMIIGSVLMACSGLKC-MSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
+ S+L C+ M Q K+ HG+ I+ L S L + +A++ +Y K GNI+ + V
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552
Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
F+ KD+VSW SMIS Y +G A +AL++F M + V+ D +T + +A + ++
Sbjct: 553 FKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLV 612
Query: 479 KKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMIN 536
++G++ ++R S +VD+Y+R G L+ A KV N +W +++
Sbjct: 613 EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILA 672
Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
A +H + G++A + M+ E A L+ +YA SG E K ++M
Sbjct: 673 ACRVHKKTELGRLAAEKIIAMKPEDSAA--YVLLSNMYA--ESGDWQERAKVRKLM 724
Score = 213 bits (541), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/429 (31%), Positives = 226/429 (52%), Gaps = 11/429 (2%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y KCG+V A LFDK ++V TWN+M+ Y +NG L L + MR+ + + +
Sbjct: 238 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS 297
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
F VIK CA LK+L ++H V+K G+ I +L+ Y+KC A +LF +G
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
+VV W ++IS + + EA+ LF EM+R G+ N +T+ L A S
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PS 413
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
E+HA VK+ V AL+ Y + GK+ EAA V +++KD V+W++ML G+ Q
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 241 LYCKAMQFFRELQGAGQKPDQVC---TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
A++ F EL G KP++ +N +A+ ++ GK+ H +AIK S L
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN--ASMGQGKQFHGFAIKSRLDSSLC 531
Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
+ + L+ MYAK + VF + +D +SW ++I+GYAQ+ +KAL++F+ ++
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591
Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSDLVILNA-IVDVYGKCGNIDYS 415
+ D + V AC+ + + ++ ++R ++ N+ +VD+Y + G ++ +
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Query: 416 RNVFESIES 424
V E++ +
Sbjct: 652 MKVIENMPN 660
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 530 bits (1364), Expect = e-149, Method: Compositional matrix adjust.
Identities = 292/837 (34%), Positives = 468/837 (55%), Gaps = 37/837 (4%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y K G V + + LF+++ R V WN ML AY+ G ++ S G++ + T
Sbjct: 189 IYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
+ A+I G D +D V +A D
Sbjct: 249 LRLL-------------ARISG-------DDSD---AGQVKSFANGNDASSV-------- 277
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
+++ N +S Y SGQ L F +M + + TF+ L LG
Sbjct: 278 --SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
++H +K G +L + V+N+LI MY + K A V + +D +SWNS++ G QN
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIKQGFVSDLQIG 299
L +A+ F +L G KPDQ + + A+ L L+ K++H +AIK VSD +
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 455
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
L+D Y++ C+ + ++ D ++W ++AGY Q++ K L+LF + +G
Sbjct: 456 TALIDAYSRNRCMKE-AEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
+D + +V C L ++Q K++H Y I+ G DL + + I+D+Y KCG++ ++
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
F+SI D V+WT+MIS + NG A +F M V D T+ + A+S L+ L
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634
Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
++G++++ ++ + V +SLVDMYA+CG++D A +F ++ ++ W +M+
Sbjct: 635 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694
Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
HG GK + LF +M++ PD +TF+ +L ACSHSGL++E K + M DY + P
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
EHY+CL D LGRA +++A + SM +E +A ++ LL ACRV + E G+ VA KLL
Sbjct: 755 IEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL 814
Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
EL+P + YVL+SN++AA+ KW +++ R M+G +KK PG SWIE+ NKIH F+ D
Sbjct: 815 ELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDD 874
Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
+S+ +++ IY+K+ ++ +++E GYV +T F L +VEEEEK + LY HSE+LA+A+G+L
Sbjct: 875 RSNRQTELIYRKVKDMIRDIKQE-GYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLL 933
Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
+ + IR+ KNLRVC DCH+ K +++++ RE+V+RDANRFH F+ G+CSCGDYW
Sbjct: 934 STPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 231 bits (588), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 169/646 (26%), Positives = 311/646 (48%), Gaps = 45/646 (6%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPL--RVLETYSRMRVLGISV-- 56
MY KCGS+ A ++FDK+ R + +WN++L AY + E + + + + R+L V
Sbjct: 83 MYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVY 142
Query: 57 -DAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
T ++K C + HG K G D +F+ +LV +Y K ++ + L
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
F+ M + DVVLWN ++ AY G EA+ L GL N T + D S
Sbjct: 203 FEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDS- 260
Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
A VKS +A + + ++++ N L+
Sbjct: 261 -------DAGQVKS---------------FANGNDASSVSEIIFR---------NKGLSE 289
Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
++ + Y ++ F ++ + + DQV + ++ + ++ +L G+++H A+K G
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
L + N+L++MY K + VF M+ +D ISW ++IAG AQN ++A+ LF +
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 356 EGLDADVMIIGSVLMACSGL-KCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNID 413
GL D + SVL A S L + +S +K++H + I+ +SD + A++D Y + +
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
+ +FE + D+V+W +M++ Y + ++ L+LF LM++ SD TL +
Sbjct: 470 EAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
L + +GK+++ + I+ G++L+ V+S ++DMY +CG + A F+ + D + WT+
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 534 MINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF-LEIMRCD 592
MI+ +G + A +F +M PD T L A S + +G++ ++ +
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 593 YQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
DP+ LVD+ + +++AY + +++ W A+L
Sbjct: 649 CTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAML 691
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/577 (23%), Positives = 257/577 (44%), Gaps = 45/577 (7%)
Query: 73 DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
DL G H +L + F++N+L++MY+KC AR++FD+M ++ D+V WNSI+
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR-DLVSWNSIL 112
Query: 133 SAYSASGQCL-----EALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
+AY+ S +C+ +A LFR +++ + T+ T L+ C S + H
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
K G + +VA AL+ +Y + GK+ E + ++ +D V WN ML +++ +A+
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
+G P+++ RL ++G + A G V GN
Sbjct: 233 LSSAFHSSGLNPNEITL--------RLLARISGDDSDA-----GQVKSFANGND------ 273
Query: 308 KCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
+ + I ++ Y + + L+ F + ++ D +
Sbjct: 274 -------------ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFIL 320
Query: 368 VLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
+L + ++ +++H ++ GL L + N+++++Y K ++R VF+++ +D
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERD 380
Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI-LKKGKELN 485
++SW S+I+ NGL EA+ LF + ++ D T+ S L AASSL L K+++
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVH 440
Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
I+ + V+++L+D Y+R + A +F DL+ W +M+ G
Sbjct: 441 VHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGH 499
Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYAC 604
+ LF M + D T + C IN+GK+ ++ Y LD W +
Sbjct: 500 KTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SG 557
Query: 605 LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGAC 641
++D+ + + A QF P W ++ C
Sbjct: 558 ILDMYVKCGDMSAA-QFAFDSIPVPDDVAWTTMISGC 593
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 188/440 (42%), Gaps = 36/440 (8%)
Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVAN 199
QCL L +++ + L+ SS LG HA + +N + ++ N
Sbjct: 19 QCLRPLRFTSAASPSSSSSSSSQWFGFLRNAITSSDLMLGKCTHARILTFEENPERFLIN 78
Query: 200 ALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN-----DLYCKAMQFFRELQG 254
LI+MY++CG +T A V ++ ++D VSWNS+L + Q+ + +A FR L+
Sbjct: 79 NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQ 138
Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
++ + G + + H YA K G D + L+++Y K V
Sbjct: 139 DVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE 198
Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
+F +M +D + W ++ Y + +A++L GL+ + +
Sbjct: 199 GKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT---------- 248
Query: 375 LKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
L +L I G + N ++ +++ +
Sbjct: 249 ---------------------LRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGL 287
Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
S Y+H+G + L+ F M E++VE D +T + L+ A + L G++++ ++ G +
Sbjct: 288 SEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLD 347
Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
L +V++SL++MY + A VF+ + +DLI W S+I +G A+ LF ++
Sbjct: 348 LMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL 407
Query: 555 EAESFAPDHITFLALLYACS 574
PD T ++L A S
Sbjct: 408 LRCGLKPDQYTMTSVLKAAS 427
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 525 bits (1352), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/692 (38%), Positives = 413/692 (59%), Gaps = 39/692 (5%)
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
++HA +++ Q+L A+ +I++Y + EA + L++ ++W S++ F
Sbjct: 26 QLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQS 84
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
L+ KA+ F E++ +G+ PD + + + + +L G+ +H + ++ G DL GN
Sbjct: 85 LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144
Query: 301 TLMDMYAKC-------------------------------CCVNYMG-----RVFYQMTA 324
LM+MYAK C+ G RVF M
Sbjct: 145 ALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR 204
Query: 325 QDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
+D +S+ TIIAGYAQ+ + AL + R + L D + SVL S + + KEI
Sbjct: 205 KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264
Query: 385 HGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA 443
HGY+IRKG+ SD+ I +++VD+Y K I+ S VF + +D +SW S+++ YV NG
Sbjct: 265 HGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRY 324
Query: 444 NEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSL 503
NEAL LF M A V+ ++ S + A + L+ L GK+L+G+++R GF +AS+L
Sbjct: 325 NEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASAL 384
Query: 504 VDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDH 563
VDMY++CG + A K+F+ + D + WT++I + LHG G A+ LF +M+ + P+
Sbjct: 385 VDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQ 444
Query: 564 ITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVR 623
+ F+A+L ACSH GL++E + M Y L+ EHYA + DLLGRA LEEAY F+
Sbjct: 445 VAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFIS 504
Query: 624 SMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKD 683
M +EPT VW LL +C VH N EL E VA+K+ +D N G YVL+ N++A++ +WK+
Sbjct: 505 KMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKE 564
Query: 684 VEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGG 743
+ ++R+RMR GL+K P SWIE+ NK H F++ D+SH D+I + L + E++E+E G
Sbjct: 565 MAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKE-G 623
Query: 744 YVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
YVA T VLH+V+EE K ++L+GHSERLA+A+G++ + G+ IR+TKN+R+C DCH K
Sbjct: 624 YVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIK 683
Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
+S++ RE++VRD +RFHHF G CSCGDYW
Sbjct: 684 FISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 228/457 (49%), Gaps = 41/457 (8%)
Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
V+ W S+I ++ +AL F EM+ G + F + L++C G +H
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 185 ATVKSGQNLQVYVANALIAMYARCGKM----------------TEAAG------------ 216
V+ G + +Y NAL+ MYA+ M T +G
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 217 --------VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
V + KD VS+N+++ G+ Q+ +Y A++ RE+ KPD + +
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
+++ GKE+H Y I++G SD+ IG++L+DMYAK + RVF ++ +D I
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
SW +++AGY QN + +AL LFR + + + SV+ AC+ L + K++HGY+
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 389 IRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
+R G S++ I +A+VD+Y KCGNI +R +F+ + D VSWT++I + +G +EA+
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDM 506
LF M V+ + + V+ L+A S + ++ + N G N E +++ D+
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489
Query: 507 YARCGALDIANKVFN--CVQTKDLILWTSMINANGLH 541
R G L+ A + CV+ + W++++++ +H
Sbjct: 490 LGRAGKLEEAYNFISKMCVEPTGSV-WSTLLSSCSVH 525
Score = 211 bits (536), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 239/492 (48%), Gaps = 55/492 (11%)
Query: 15 FDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDL 74
F + V W +++ + + L ++ MR G D FP V+K+C M+ DL
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 75 DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKC---------------------------- 106
G +HG +++ G D + N+L+ MYAK
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 107 --------YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
+ R++F+ M K DVV +N+II+ Y+ SG +AL + REM L
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRK-DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 159 NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL 218
+++T + L + G EIH ++ G + VY+ ++L+ MYA+ ++ ++ V
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 219 YQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLL 278
+L +D +SWNS++ G+VQN Y +A++ FR++ A KP V + + A L L
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 279 NGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
GK+LH Y ++ GF S++ I + L+DMY+KC + ++F +M D +SWT II G+A
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVI 398
+ +A+ LF ++ +G+ + + +VL ACS + + E GY ++ +
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD---EAWGYF--NSMTKVYG 475
Query: 399 LN-------AIVDVYGKCGNIDYSRNVFES--IESKDVVSWTSMISS-YVHNG--LANEA 446
LN A+ D+ G+ G ++ + N +E V W++++SS VH LA +
Sbjct: 476 LNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV-WSTLLSSCSVHKNLELAEKV 534
Query: 447 LELFYLMNEANV 458
E + ++ N+
Sbjct: 535 AEKIFTVDSENM 546
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 190/396 (47%), Gaps = 28/396 (7%)
Query: 12 EQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAML 71
++F+ + ++ V ++N ++ Y +G L M + D+FT V+ +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 72 KDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSI 131
D+ G +IHG V++ G DS +I +SLV MYAK + ++F R+ + D + WNS+
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR-DGISWNSL 314
Query: 132 ISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQ 191
++ Y +G+ EAL LFR+M + A F + + AC + LG ++H ++ G
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 192 NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRE 251
+++A+AL+ MY++CG + A + ++ D VSW +++ G + +A+ F E
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 252 LQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCC 311
++ G KP+QV V ++A +G + E Y V L N ++ YA
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLV---DEAWGYFNSMTKVYGL---NQELEHYA--AV 486
Query: 312 VNYMGRVFYQMTAQDFIS----------WTTIIAGYAQNNCHL-KALELFRTVQLEGLDA 360
+ +GR A +FIS W+T+++ +C + K LEL V +
Sbjct: 487 ADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS-----SCSVHKNLELAEKVAEKIFTV 541
Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIR---KGL 393
D +G+ ++ C+ + KE+ +R KGL
Sbjct: 542 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 127/238 (53%), Gaps = 7/238 (2%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY K + D+E++F ++ R +WN+++ YV NG L + +M + A
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
F VI ACA L L G ++HG VL+ G+ S FI ++LV MY+KC + + AR++FDRM
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF--ETL 178
++V W +II ++ G EA+ LF EM+R G+ N FVA L AC E
Sbjct: 406 VLDEVS-WTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL--ENKDSVSWNSMLT 234
G ++ T G N ++ A+ + R GK+ EA + ++ E SV W+++L+
Sbjct: 465 GY-FNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV-WSTLLS 520
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 124/292 (42%), Gaps = 39/292 (13%)
Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE 423
+I +++ + +K SQ K++H IR + ++ +Y + + +F++++
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLK 66
Query: 424 SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKE 483
S V++W S+I + L ++AL F M + D S L + + + L+ G+
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARC--------------------------------- 510
++GFI+R G + + ++L++MYA+
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 511 ---GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
+D +VF + KD++ + ++I G + A+ + +M PD T
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 568 ALLYACSHSGLINEGKKFLE-IMRCDYQLDPWPEHYACLVDLLGRANHLEEA 618
++L S + +GK+ ++R D + + LVD+ ++ +E++
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIG--SSLVDMYAKSARIEDS 296
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 516 bits (1329), Expect = e-145, Method: Compositional matrix adjust.
Identities = 300/851 (35%), Positives = 487/851 (57%), Gaps = 19/851 (2%)
Query: 1 MYGKC-GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
MY KC GSV A F + + +WN+++ Y G+ +S M+ G +
Sbjct: 148 MYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEY 207
Query: 60 TF-PCVIKACAMLK-DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
TF V AC++ + D+ +I + K G + F+ + LV+ +AK AR++F+
Sbjct: 208 TFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFN 267
Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF-E 176
+M E + V N ++ EA LF +M + + + ++V L + + S E
Sbjct: 268 QM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAE 325
Query: 177 TLGM----EIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
+G+ E+H + +G + V + N L+ MYA+CG + +A V Y + +KDSVSWNS
Sbjct: 326 EVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNS 385
Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
M+TG QN + +A++ ++ ++ P ++++S+ L G+++H ++K G
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHL-KALELF 350
++ + N LM +YA+ +N ++F M D +SW +II A++ L +A+ F
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKC 409
Q G + + SVL A S L K+IHG ++ ++D NA++ YGKC
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKC 565
Query: 410 GNIDYSRNVFESI-ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
G +D +F + E +D V+W SMIS Y+HN L +AL+L + M + DS +
Sbjct: 566 GEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
LSA +S++ L++G E++ +R + V S+LVDMY++CG LD A + FN + ++
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685
Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACSHSGLINEGKKFLE 587
W SMI+ HG+G+ A+ LF M+ + PDH+TF+ +L ACSH+GL+ EG K E
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 745
Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA-CRVHSN 646
M Y L P EH++C+ D+LGRA L++ F+ M ++P +W +LGA CR +
Sbjct: 746 SMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGR 805
Query: 647 K-ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWI 705
K ELG+ A+ L +L+P N NYVL+ N++AA +W+D+ + R +M+ + +KK G SW+
Sbjct: 806 KAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Query: 706 EIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLY 765
+ + +H F+A DKSH ++D IYKKL E+ K+ R+ GYV QT F L+++E+E K ++L
Sbjct: 866 TMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM-RDAGYVPQTGFALYDLEQENKEEILS 924
Query: 766 GHSERLAIAYGVLKSTEGSL-IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHF 824
HSE+LA+A+ + +L IRI KNLRVC DCHS K +S++ GR++++RD+NRFHHF
Sbjct: 925 YHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHF 984
Query: 825 EAGVCSCGDYW 835
+ G CSC D+W
Sbjct: 985 QDGACSCSDFW 995
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 192/695 (27%), Positives = 338/695 (48%), Gaps = 29/695 (4%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y + G + A ++FD++ R +W ++ Y NGE L M GI + + F
Sbjct: 46 YLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAF 105
Query: 62 PCVIKACAMLKDLDC--GAKIHGLVLKCGYDSTDFIVNSLVAMYAKCY-DFRKARQLFDR 118
V++AC + + G +IHGL+ K Y + N L++MY KC A F
Sbjct: 106 VSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGD 165
Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAAL-QACEDSSFET 177
+ E ++ V WNSIIS YS +G A +F MQ G YTF + + AC + +
Sbjct: 166 I-EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV 224
Query: 178 LGMEIHAATV-KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
+E T+ KSG ++V + L++ +A+ G ++ A V Q+E +++V+ N ++ G
Sbjct: 225 RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 237 VQNDLYCKAMQFFRELQGA-GQKPDQ----VCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
V+ +A + F ++ P+ + + S + +G L G+E+H + I G
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTG 343
Query: 292 FVSDL-QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
V + IGN L++MYAKC + RVFY MT +D +SW ++I G QN C ++A+E +
Sbjct: 344 LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERY 403
Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
++++ + + S L +C+ LK ++IHG ++ G+ ++ + NA++ +Y +
Sbjct: 404 KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463
Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLA-NEALELFYLMNEANVESDSITLVSA 468
G ++ R +F S+ D VSW S+I + + + EA+ F A + + IT S
Sbjct: 464 GYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSV 523
Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFN-CVQTKD 527
LSA SSLS + GK+++G ++ E + ++L+ Y +CG +D K+F+ + +D
Sbjct: 524 LSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRD 583
Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
+ W SMI+ + A+DL + M D + +L A + + G +E
Sbjct: 584 NVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG---ME 640
Query: 588 IMRCDYQ--LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHS 645
+ C + L+ + LVD+ + L+ A +F +M + + W +++ H
Sbjct: 641 VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHG 699
Query: 646 NKELGEIVAKKLLE---LDPGNPGNYVLISNVFAA 677
E A KL E LD P ++V V +A
Sbjct: 700 QGE----EALKLFETMKLDGQTPPDHVTFVGVLSA 730
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 253/479 (52%), Gaps = 32/479 (6%)
Query: 80 IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
H + K D ++ N+L+ Y + D AR++FD M + + V W I+S YS +G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR-NCVSWACIVSGYSRNG 81
Query: 140 QCLEALGLFREMQRVGLVTNAYTFVAALQACED--SSFETLGMEIHAATVKSGQNLQVYV 197
+ EAL R+M + G+ +N Y FV+ L+AC++ S G +IH K + V
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 198 ANALIAMYARC-GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
+N LI+MY +C G + A +E K+SVSWNS+++ + Q A + F +Q G
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 257 QKPDQVCTVNAVSASGRL--GNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
+P + + V+ + L ++ +++ K G ++DL +G+ L+ +AK ++Y
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS----VLM 370
+VF QM ++ ++ ++ G + +A +LF +D + MI S V++
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF-------MDMNSMIDVSPESYVIL 314
Query: 371 ACS----------GLKCMSQTKEIHGYIIRKGLSDLV--ILNAIVDVYGKCGNIDYSRNV 418
S GLK + +E+HG++I GL D + I N +V++Y KCG+I +R V
Sbjct: 315 LSSFPEYSLAEEVGLK---KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371
Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
F + KD VSW SMI+ NG EA+E + M ++ S TL+S+LS+ +SL
Sbjct: 372 FYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
K G++++G ++ G +L SV+++L+ +YA G L+ K+F+ + D + W S+I A
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust.
Identities = 274/795 (34%), Positives = 469/795 (58%), Gaps = 17/795 (2%)
Query: 55 SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ 114
+D+ TF ++K+C +D G +H +++ + + NSL+++Y+K D KA
Sbjct: 59 PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 115 LFDRMGE--KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
+F+ M K DVV W+++++ Y +G+ L+A+ +F E +GLV N Y + A ++AC +
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 173 SSFETLGMEIHAATVKSGQ-NLQVYVANALIAMYARCGKMTEAA-GVLYQLENKDSVSWN 230
S F +G +K+G V V +LI M+ + E A V ++ + V+W
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
M+T +Q +A++FF ++ +G + D+ + SA L NL GK+LH++AI+
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 291 GFVSDLQIGNTLMDMYAKCCC---VNYMGRVFYQMTAQDFISWTTIIAGYAQN-NCHLKA 346
G V D++ +L+DMYAKC V+ +VF +M +SWT +I GY +N N +A
Sbjct: 299 GLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA 356
Query: 347 LELFRTVQLEG-LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVD 404
+ LF + +G ++ + S AC L K++ G ++GL S+ + N+++
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS 416
Query: 405 VYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSIT 464
++ K ++ ++ FES+ K++VS+ + + N +A +L + E + + T
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 465 LVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ 524
S LS +++ ++KG++++ +++ G + V ++L+ MY++CG++D A++VFN ++
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 525 TKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKK 584
+++I WTSMI HG ++ F +M E P+ +T++A+L ACSH GL++EG +
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
Query: 585 FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
M D+++ P EHYAC+VDLL RA L +A++F+ +M + VW LGACRVH
Sbjct: 597 HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656
Query: 645 SNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSW 704
SN ELG++ A+K+LELDP P Y+ +SN++A + KW++ ++R +M+ L K G SW
Sbjct: 657 SNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSW 716
Query: 705 IEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV----EEEEK 760
IE+G+KIH F D +H + +IY +L + +++R GYV T VLH + +E EK
Sbjct: 717 IEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKR-CGYVPDTDLVLHKLEEENDEAEK 775
Query: 761 VQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANR 820
++LY HSE++A+A+G++ +++ +R+ KNLRVC DCH+ K +S + GRE+V+RD NR
Sbjct: 776 ERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNR 835
Query: 821 FHHFEAGVCSCGDYW 835
FHHF+ G CSC DYW
Sbjct: 836 FHHFKDGKCSCNDYW 850
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 158/590 (26%), Positives = 301/590 (51%), Gaps = 21/590 (3%)
Query: 1 MYGKCGSVLDAEQLFD---KVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
+Y K G AE +F+ + +R V +W+AM+ Y +NG L ++ + LG+ +
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 58 AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVN-SLVAMYAKCYD-FRKARQL 115
+ + VI+AC+ + G G ++K G+ +D V SL+ M+ K + F A ++
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
FD+M E +VV W +I+ G EA+ F +M G ++ +T + AC +
Sbjct: 226 FDKMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARC---GKMTEAAGVLYQLENKDSVSWNSM 232
+LG ++H+ ++SG L V +L+ MYA+C G + + V ++E+ +SW ++
Sbjct: 285 LSLGKQLHSWAIRSG--LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 233 LTGFVQN-DLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
+TG+++N +L +A+ F E+ G +P+ +A A G L + GK++ A K+
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
G S+ + N+++ M+ K + R F ++ ++ +S+ T + G +N +A +L
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 351 RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKC 409
+ L S+L + + + + ++IH +++ GLS + + NA++ +Y KC
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
G+ID + VF +E+++V+SWTSMI+ + +G A LE F M E V+ + +T V+ L
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAIL 582
Query: 470 SAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-D 527
SA S + ++ +G + N + + +VD+ R G L A + N + + D
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642
Query: 528 LILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
+++W + + A +H GK+A +++ P L+ +YAC+
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKILELDPNE--PAAYIQLSNIYACA 690
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 265/747 (35%), Positives = 433/747 (57%), Gaps = 10/747 (1%)
Query: 96 VNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
N++++ + K D AR LFD M ++ VV W ++ Y+ + EA LFR+M R
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRT-VVTWTILMGWYARNSHFDEAFKLFRQMCRSS 140
Query: 156 LVT--NAYTFVAALQACEDSSFETLGMEIHAATVKSG--QNLQVYVANALIAMYARCGKM 211
T + TF L C D+ + ++HA VK G N + V+N L+ Y ++
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
A + ++ KDSV++N+++TG+ ++ LY +++ F +++ +G +P + A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
L + G++LHA ++ GF D +GN ++D Y+K V +F +M DF+S+
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH-GYIIR 390
+I+ Y+Q + + +L FR +Q G D ++L + L + +++H ++
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 391 KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELF 450
S L + N++VD+Y KC + + +F+S+ + VSWT++IS YV GL L+LF
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 451 YLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS-LVDMYAR 509
M +N+ +D T + L A++S + L GK+L+ FIIR G NLE + S LVDMYA+
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAK 499
Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
CG++ A +VF + ++ + W ++I+A+ +G G+ AI F KM PD ++ L +
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559
Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
L ACSH G + +G ++ + M Y + P +HYAC++DLLGR EA + + M EP
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDP-GNPGNYVLISNVFAASRKWKDVEQVR 688
+W ++L ACR+H N+ L E A+KL ++ + YV +SN++AA+ +W+ V V+
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679
Query: 689 MRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQT 748
MR G+KK P SW+E+ +KIH F + D++H DEI +K+ E+T ++ERE GY T
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE-GYKPDT 738
Query: 749 QFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRL 808
V+ +V+E+ K++ L HSERLA+A+ ++ + EG I + KNLR C DCH+ KL+S++
Sbjct: 739 SSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKI 798
Query: 809 FGRELVVRDANRFHHFEAGVCSCGDYW 835
RE+ VRD +RFHHF GVCSCGDYW
Sbjct: 799 VKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 249 bits (636), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 157/551 (28%), Positives = 276/551 (50%), Gaps = 8/551 (1%)
Query: 4 KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISV-DAFTF 61
K G V A LFD + RTV TW ++G Y N + + +M R ++ D TF
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV--NSLVAMYAKCYDFRKARQLFDRM 119
++ C + ++H +K G+D+ F+ N L+ Y + A LF+ +
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
EK D V +N++I+ Y G E++ LF +M++ G + +TF L+A LG
Sbjct: 211 PEK-DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
++HA +V +G + V N ++ Y++ ++ E + ++ D VS+N +++ + Q
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
D Y ++ FFRE+Q G +S + L +L G++LH A+ S L +G
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
N+L+DMYAKC +F + + +SWT +I+GY Q H L+LF ++ L
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNV 418
AD +VL A + + K++H +IIR G L ++ + +VD+Y KCG+I + V
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
FE + ++ VSW ++IS++ NG A+ F M E+ ++ DS++++ L+A S +
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFV 569
Query: 479 KKGKE-LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMIN 536
++G E G + + ++D+ R G A K+ + + D I+W+S++N
Sbjct: 570 EQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLN 629
Query: 537 ANGLHGRGKVA 547
A +H +A
Sbjct: 630 ACRIHKNQSLA 640
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 232/470 (49%), Gaps = 17/470 (3%)
Query: 14 LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
LF+++ ++ T+N ++ Y +G + + +MR G FTF V+KA L D
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 74 LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
G ++H L + G+ + N ++ Y+K + R LFD M E D V +N +IS
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL-DFVSYNVVIS 324
Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
+YS + Q +L FREMQ +G + F L + S +G ++H + + +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
++V N+L+ MYA+C EA + L + +VSW ++++G+VQ L+ ++ F +++
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
G+ + DQ + AS +LL GK+LHA+ I+ G + ++ G+ L+DMYAKC +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
+VF +M ++ +SW +I+ +A N A+ F + GL D + I VL ACS
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 374 -------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SK 425
G + I+G +K ++D+ G+ G + + + +
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKH-----YACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 426 DVVSWTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
D + W+S++++ + + LA A E + M + + +++ + +AA
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAA 669
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 1/282 (0%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
Y K VL+ LFD++ + ++N ++ +Y + L + M+ +G F
Sbjct: 294 FYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP 353
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
F ++ A L L G ++H L DS + NSLV MYAKC F +A +F +
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
++ V W ++IS Y G L LF +M+ L + TF L+A + LG
Sbjct: 414 QRT-TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGK 472
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
++HA ++SG V+ + L+ MYA+CG + +A V ++ ++++VSWN++++ N
Sbjct: 473 QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNG 532
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
A+ F ++ +G +PD V + ++A G + G E
Sbjct: 533 DGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KC +AE +F + QRT +W A++ YV G L+ +++MR + D T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
F V+KA A L G ++H +++ G F + LV MYAKC + A Q+F+ M
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
++ + V WN++ISA++ +G A+G F +M GL ++ + + L AC F G
Sbjct: 515 DR-NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGT 573
Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
E A + G + ++ + R G+ EA ++ ++ D + W+S+L
Sbjct: 574 EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 169/403 (41%), Gaps = 44/403 (10%)
Query: 275 GNLLNGKELHAYAIKQGFVSD-----------LQIG--------------------NTLM 303
L+ + + A IK GF +D L+ G NT++
Sbjct: 27 ATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMI 86
Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV--QLEGLDAD 361
+ K V+ +F M + ++WT ++ YA+N+ +A +LFR + D
Sbjct: 87 SGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPD 146
Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD---LVILNAIVDVYGKCGNIDYSRNV 418
+ ++L C+ + ++H + ++ G L + N ++ Y + +D + +
Sbjct: 147 HVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVL 206
Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
FE I KD V++ ++I+ Y +GL E++ LF M ++ + T L A L
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266
Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
G++L+ + GF+ + SV + ++D Y++ + +F+ + D + + +I++
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL--- 595
+ + ++ F +M+ F + F +L ++ + G++ + C L
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ----LHCQALLATA 382
Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
D LVD+ + EEA +S+ T W AL+
Sbjct: 383 DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALI 424
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 511 bits (1315), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/761 (34%), Positives = 432/761 (56%), Gaps = 8/761 (1%)
Query: 78 AKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSA 137
A+ H ++ G+ + ++ L + AR +F + ++ DV L+N ++ +S
Sbjct: 37 AQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV-QRPDVFLFNVLMRGFSV 95
Query: 138 SGQCLEALGLFREMQR-VGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
+ +L +F +++ L N+ T+ A+ A + G IH V G + ++
Sbjct: 96 NESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155
Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
+ + ++ MY + ++ +A V ++ KD++ WN+M++G+ +N++Y +++Q FR+L
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 257 -QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYM 315
+ D ++ + A L L G ++H+ A K G S + + +Y+KC +
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 316 GRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
+F + D +++ +I GY N +L LF+ + L G + S++ L
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Query: 376 KCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMI 434
+ IHGY ++ LS + A+ VY K I+ +R +F+ K + SW +MI
Sbjct: 336 MLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392
Query: 435 SSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFN 494
S Y NGL +A+ LF M ++ + +T+ LSA + L L GK ++ + F
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452
Query: 495 LEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKM 554
V+++L+ MYA+CG++ A ++F+ + K+ + W +MI+ GLHG+G+ A+++FY+M
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512
Query: 555 EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANH 614
P +TFL +LYACSH+GL+ EG + M Y +P +HYAC+VD+LGRA H
Sbjct: 513 LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGH 572
Query: 615 LEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNV 674
L+ A QF+ +M IEP + VW LLGACR+H + L V++KL ELDP N G +VL+SN+
Sbjct: 573 LQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNI 632
Query: 675 FAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
+A R + VR + L K PG + IEIG H F + D+SH + EIY+KL ++
Sbjct: 633 HSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKL 692
Query: 735 TEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRV 794
K+ RE GY +T+ LH+VEEEE+ M+ HSERLAIA+G++ + G+ IRI KNLRV
Sbjct: 693 EGKM-REAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRV 751
Query: 795 CVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
C+DCH+ KL+S++ R +VVRDANRFHHF+ GVCSCGDYW
Sbjct: 752 CLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/570 (27%), Positives = 278/570 (48%), Gaps = 11/570 (1%)
Query: 6 GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAFTFPCV 64
G++ A +F V + VF +N ++ + N P L ++ +R + ++ T+
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 65 IKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKED 124
I A + +D G IHG + G DS + +++V MY K + AR++FDRM EK D
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK-D 184
Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGMEIH 183
+LWN++IS Y + +E++ +FR++ + T + L A + LGM+IH
Sbjct: 185 TILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIH 244
Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
+ K+G YV I++Y++CGK+ + + + D V++N+M+ G+ N
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304
Query: 244 KAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLM 303
++ F+EL +G + V+ V SG L + +H Y +K F+S + L
Sbjct: 305 LSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALT 361
Query: 304 DMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVM 363
+Y+K + ++F + + SW +I+GY QN A+ LFR +Q + +
Sbjct: 362 TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPV 421
Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESI 422
I +L AC+ L +S K +H + S + + A++ +Y KCG+I +R +F+ +
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
K+ V+W +MIS Y +G EAL +FY M + + +T + L A S ++K+G
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 483 EL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD-LILWTSMINANGL 540
E+ N I R GF + +VD+ R G L A + + + +W +++ A +
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601
Query: 541 HGRGKVAIDLFYKMEAESFAPDHITFLALL 570
H +A + K+ PD++ + LL
Sbjct: 602 HKDTNLARTVSEKL--FELDPDNVGYHVLL 629
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 224/465 (48%), Gaps = 11/465 (2%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS-VDAF 59
MY K V DA ++FD++ ++ WN M+ Y N + ++ + + + +D
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222
Query: 60 TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
T ++ A A L++L G +IH L K G S D+++ +++Y+KC + LF R
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF-RE 281
Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
K D+V +N++I Y+++G+ +L LF+E+ G + T V+ + S L
Sbjct: 282 FRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLI 338
Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
IH +KS V+ AL +Y++ ++ A + + K SWN+M++G+ QN
Sbjct: 339 YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN 398
Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
L A+ FRE+Q + P+ V +SA +LG L GK +H F S + +
Sbjct: 399 GLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVS 458
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
L+ MYAKC + R+F MT ++ ++W T+I+GY + +AL +F + G+
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518
Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYII-RKGLSDLVILNA-IVDVYGKCGNIDYSRN 417
+ VL ACS + + EI +I R G V A +VD+ G+ G++ +
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ 578
Query: 418 VFE--SIESKDVVSWTSMISSYVH--NGLANEALELFYLMNEANV 458
E SIE V T + + +H LA E + ++ NV
Sbjct: 579 FIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNV 623
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/765 (34%), Positives = 436/765 (56%), Gaps = 7/765 (0%)
Query: 1 MYGKCGSVLDAEQLFDKVSQR--TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDA 58
MY CGS D ++F ++ R ++ WN+++ ++V NG + L Y +M G+S D
Sbjct: 79 MYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDV 138
Query: 59 FTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
TFPC++KAC LK+ + V G D +F+ +SL+ Y + +LFDR
Sbjct: 139 STFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDR 198
Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
+ +K D V+WN +++ Y+ G + F M+ + NA TF L C L
Sbjct: 199 VLQK-DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL 257
Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
G+++H V SG + + + N+L++MY++CG+ +A+ + + D+V+WN M++G+VQ
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
+ L +++ FF E+ +G PD + + + + + NL K++H Y ++ D+ +
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
+ L+D Y KC V+ +F Q + D + +T +I+GY N ++ +LE+FR + +
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN-AIVDVYGKCGNIDYSRN 417
+ + + S+L L + +E+HG+II+KG + + A++D+Y KCG ++ +
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
+FE + +D+VSW SMI+ + + A+++F M + + D +++ +ALSA ++L
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557
Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
GK ++GF+I+ + S+L+DMYA+CG L A VF ++ K+++ W S+I A
Sbjct: 558 ESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAA 617
Query: 538 NGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
G HG+ K ++ LF++M E PD ITFL ++ +C H G ++EG +F M DY +
Sbjct: 618 CGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677
Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
P EHYAC+VDL GRA L EAY+ V+SM P A VW LLGACR+H N EL E+ + K
Sbjct: 678 PQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSK 737
Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
L++LDP N G YVLISN A +R+W+ V +VR M+ ++K PG SWIEI + H F++
Sbjct: 738 LMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVS 797
Query: 717 RDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKV 761
D +H ES IY L + +L E GY+ Q LH E KV
Sbjct: 798 GDVNHPESSHIYSLLNSLLGELRLE-GYIPQPYLPLHP-ESSRKV 840
Score = 262 bits (669), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 171/588 (29%), Positives = 306/588 (52%), Gaps = 14/588 (2%)
Query: 64 VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG-EK 122
+++AC+ L G ++H ++ + ++ MYA C F ++F R+ +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED-SSFETLGME 181
+ WNSIIS++ +G +AL + +M G+ + TF ++AC +F+ G++
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK--GID 158
Query: 182 IHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
+ TV S G + +VA++LI Y GK+ + + ++ KD V WN ML G+ +
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 241 LYCKAMQFFRELQGAGQKPDQVC--TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
++ F ++ P+ V V +V AS L +L G +LH + G + I
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL--GVQLHGLVVVSGVDFEGSI 276
Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
N+L+ MY+KC + ++F M+ D ++W +I+GY Q+ ++L F + G+
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
D + S+L + S + + K+IH YI+R +S D+ + +A++D Y KC + ++N
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
+F S DVV +T+MIS Y+HNGL ++LE+F + + + + ITLVS L L
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
LK G+EL+GFII+KGF+ ++ +++DMYA+CG +++A ++F + +D++ W SMI
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM-RCDYQLD 596
AID+F +M D ++ A L AC++ + GK M + D
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD 576
Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
+ E + L+D+ + +L+ A ++M+ E W +++ AC H
Sbjct: 577 VYSE--STLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/660 (37%), Positives = 411/660 (62%), Gaps = 9/660 (1%)
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
+IHA + G ++ LI + G +T A V L WN+++ G+ +N+
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
+ A+ + +Q A PD + + A L +L G+ +HA + GF +D+ + N
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 301 TLMDMYAKCCCVNYMGRVF--YQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
L+ +YAKC + VF + + +SWT I++ YAQN ++ALE+F ++ +
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYS 415
D + + SVL A + L+ + Q + IH +++ GL DL+I ++ +Y KCG + +
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATA 276
Query: 416 RNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSL 475
+ +F+ ++S +++ W +MIS Y NG A EA+++F+ M +V D+I++ SA+SA + +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 476 SILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMI 535
L++ + + ++ R + + ++S+L+DM+A+CG+++ A VF+ +D+++W++MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
GLHGR + AI L+ ME P+ +TFL LL AC+HSG++ EG F M D+++
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKI 455
Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
+P +HYAC++DLLGRA HL++AY+ ++ M ++P VW ALL AC+ H + ELGE A+
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515
Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
+L +DP N G+YV +SN++AA+R W V +VR+RM+ GL K G SW+E+ ++ +F
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575
Query: 716 ARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
DKSH +EI +++ I +L +EGG+VA LH++ +EE + L HSER+AIAY
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRL-KEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 634
Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
G++ + +G+ +RITKNLR CV+CH+ KL+S+L RE+VVRD NRFHHF+ GVCSCGDYW
Sbjct: 635 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 229 bits (584), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/530 (27%), Positives = 274/530 (51%), Gaps = 34/530 (6%)
Query: 6 GSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVI 65
G + A Q+FD + + +F WNA++ Y N L YS M++ +S D+FTFP ++
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 66 KACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-D 124
KAC+ L L G +H V + G+D+ F+ N L+A+YAKC AR +F+ + E
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
+V W +I+SAY+ +G+ +EAL +F +M+++ + + V+ L A G IHA
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
+ VK G ++ + +L MYA+CG++ A + ++++ + + WN+M++G+ +N +
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
A+ F E+ +PD + +A+SA ++G+L + ++ Y + + D+ I + L+D
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 305 MYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMI 364
M+AKC V VF + +D + W+ +I GY + +A+ L+R ++ G+ + +
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 365 IGSVLMACSGLKCMSQTKEIHGYIIRKG------LSDLVI------LNAIVDVYGKCGNI 412
+LMAC+ H ++R+G ++D I ++D+ G+ G++
Sbjct: 427 FLGLLMACN-----------HSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHL 475
Query: 413 DYSRNVFESIESKD-VVSWTSMISS---YVHNGLANEALELFYLMNEANVESDSITLVSA 468
D + V + + + V W +++S+ + H L A + + ++ +N + +S
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSN--TGHYVQLSN 533
Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANK 518
L AA+ L + E+ + KG N + V S V++ R A + +K
Sbjct: 534 LYAAARL--WDRVAEVRVRMKEKGLNKD--VGCSWVEVRGRLEAFRVGDK 579
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 269/531 (50%), Gaps = 18/531 (3%)
Query: 53 GISVDAFTFPCVIKAC--AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFR 110
GI D+F + A A LK +IH +L G + F++ L+ + D
Sbjct: 17 GIHSDSFYASLIDSATHKAQLK------QIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70
Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
ARQ+FD + + + WN+II YS + +AL ++ MQ + +++TF L+AC
Sbjct: 71 FARQVFDDL-PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVL--YQLENKDSVS 228
S +G +HA + G + V+V N LIA+YA+C ++ A V L + VS
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVS 189
Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAI 288
W ++++ + QN +A++ F +++ KPD V V+ ++A L +L G+ +HA +
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 289 KQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
K G + + +L MYAKC V +F +M + + I W +I+GYA+N +A++
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 349 LFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYG 407
+F + + + D + I S + AC+ + + Q + ++ Y+ R D+ I +A++D++
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
KCG+++ +R VF+ +DVV W++MI Y +G A EA+ L+ M V + +T +
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429
Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
L A + ++++G + N + + ++D+ R G LD A +V C+ +
Sbjct: 430 LLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 528 -LILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
+ +W ++++A H G+ A + ++ + H L+ LYA +
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTG--HYVQLSNLYAAA 538
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KCG V A+ LFDK+ + WNAM+ Y NG ++ + M + D +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
I ACA + L+ ++ V + Y FI ++L+ M+AKC AR +FDR
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
++ DVV+W+++I Y G+ EA+ L+R M+R G+ N TF+ L AC S G
Sbjct: 386 DR-DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
N Q +I + R G + +A V+ + + V+ W ++L+
Sbjct: 445 WFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 83/193 (43%), Gaps = 12/193 (6%)
Query: 452 LMNEANVESDSI--TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
L + + SDS +L+ + + + L K+++ ++ G G + + L+ +
Sbjct: 12 LYTNSGIHSDSFYASLIDSATHKAQL------KQIHARLLVLGLQFSGFLITKLIHASSS 65
Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
G + A +VF+ + + W ++I + + A+ ++ M+ +PD TF L
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125
Query: 570 LYACSHSGLINEGK-KFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQI- 627
L ACS + G+ ++ R + D + ++ L+ L + L A + +
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN--GLIALYAKCRRLGSARTVFEGLPLP 183
Query: 628 EPTAEVWCALLGA 640
E T W A++ A
Sbjct: 184 ERTIVSWTAIVSA 196
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 499 bits (1284), Expect = e-140, Method: Compositional matrix adjust.
Identities = 288/846 (34%), Positives = 453/846 (53%), Gaps = 43/846 (5%)
Query: 28 AMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKC 87
AMLG + + T ++ +L S P +K C + +L H + K
Sbjct: 2 AMLGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDEL---KMFHRSLTKQ 58
Query: 88 GYDSTDFIVNSLVAMYAKC---YDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
G D+ + LVA + A+++F+ ++NS+I Y++SG C EA
Sbjct: 59 GLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEA 118
Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
+ LF M G+ + YTF L AC S + G++IH VK G ++V N+L+
Sbjct: 119 ILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 205 YARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ-FFRELQGAGQKPDQVC 263
YA CG++ A V ++ ++ VSW SM+ G+ + D A+ FFR ++ P+ V
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQM 322
V +SA +L +L G++++A+ G V+DL + + L+DMY KC ++ R+F +
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEY 297
Query: 323 TAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTK 382
A + + + Y + +AL +F + G+ D + + S + +CS L+ + K
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 383 EIHGYIIRKGLSDL-VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNG 441
HGY++R G I NA++D+Y KC D + +F+ + +K VV+W S+++ YV NG
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 442 LANEALELFYLMNEAN--------------------------------VESDSITLVSAL 469
+ A E F M E N V +D +T++S
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
SA L L K + +I + G L+ + ++LVDM++RCG + A +FN + +D+
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
WT+ I A + G + AI+LF M + PD + F+ L ACSH GL+ +GK+ M
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
+ + P HY C+VDLLGRA LEEA Q + M +EP +W +LL ACRV N E+
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
A+K+ L P G+YVL+SNV+A++ +W D+ +VR+ M+ GL+K PG+S I+I
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
K H F + D+SH E I L E++++ G+V VL +V+E+EK+ ML HSE
Sbjct: 718 KTHEFTSGDESHPEMPNIEAMLDEVSQRASHL-GHVPDLSNVLMDVDEKEKIFMLSRHSE 776
Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
+LA+AYG++ S +G+ IRI KNLRVC DCHSF K S+++ RE+++RD NRFH+ G C
Sbjct: 777 KLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKC 836
Query: 830 SCGDYW 835
SCGD+W
Sbjct: 837 SCGDFW 842
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 173/597 (28%), Positives = 308/597 (51%), Gaps = 40/597 (6%)
Query: 11 AEQLFDKV-SQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
A+++F+ S T F +N+++ Y S+G + + RM GIS D +TFP + ACA
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 70 MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
+ G +IHGL++K GY F+ NSLV YA+C + AR++FD M E+ +VV W
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER-NVVSWT 204
Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGMEIHAATVK 188
S+I Y+ +A+ LF M R VT N+ T V + AC G +++A
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
SG + + +AL+ MY +C + A + + + N+M + +V+ L +A+
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 249 FRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAK 308
F + +G +PD++ ++A+S+ +L N+L GK H Y ++ GF S I N L+DMY K
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 309 CCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN---------------------------- 340
C + R+F +M+ + ++W +I+AGY +N
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 341 ---NCHLKALELFRTVQ-LEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-D 395
+ +A+E+F ++Q EG++AD + + S+ AC L + K I+ YI + G+ D
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
+ + +VD++ +CG+ + + ++F S+ ++DV +WT+ I + G A A+ELF M E
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIR-KGFNLEGSVASSLVDMYARCGALD 514
++ D + V AL+A S ++++GKE+ +++ G + E +VD+ R G L+
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 515 IANKVF-NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
A ++ + + ++W S++ A + G ++A K++ AP+ LL
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV--LAPERTGSYVLL 679
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 232/472 (49%), Gaps = 39/472 (8%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFT 60
Y +CG + A ++FD++S+R V +W +M+ Y ++ + RM R ++ ++ T
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
CVI ACA L+DL+ G K++ + G + D +V++LV MY KC A++LFD G
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
++ L N++ S Y G EALG+F M G+ + + ++A+ +C G
Sbjct: 299 -ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN- 239
H +++G + NALI MY +C + A + ++ NK V+WNS++ G+V+N
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 240 ------------------------------DLYCKAMQFFRELQGA-GQKPDQVCTVNAV 268
L+ +A++ F +Q G D V ++
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
Query: 269 SASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
SA G LG L K ++ Y K G D+++G TL+DM+++C +F +T +D
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
+WT I A +A+ELF + +GL D + L ACS + Q KEI +
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 389 IR-KGLS-DLVILNAIVDVYGKCGNIDYSRNVFE--SIESKDVVSWTSMISS 436
++ G+S + V +VD+ G+ G ++ + + E +E DV+ W S++++
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAA 648
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 156/351 (44%), Gaps = 45/351 (12%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KC ++ A++LFD+ + NAM YV G L ++ M G+ D +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
I +C+ L+++ G HG VL+ G++S D I N+L+ MY KC+ A ++FDRM
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 121 EKEDVVLWNSIISAYSASGQC-------------------------------LEALGLFR 149
K VV WNSI++ Y +G+ EA+ +F
Sbjct: 400 NKT-VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 150 EMQ-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC 208
MQ + G+ + T ++ AC L I+ K+G L V + L+ M++RC
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 209 GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAV 268
G A + L N+D +W + + +A++ F ++ G KPD V V A+
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 269 SASGRLGNLLNGKELHAYAIKQGFVS--DLQIGNTLMDMYAKCCCVNYMGR 317
+A G + GKE+ +K VS D+ G C V+ +GR
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG----------CMVDLLGR 619
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
M+ +CG A +F+ ++ R V W A +GA G R +E + M G+ D
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
F + AC+ + G +I +LK G D +V + + +A QL + M
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 120 GEKEDVVLWNSIISAYSASGQ 140
+ + V+WNS+++A G
Sbjct: 634 PMEPNDVIWNSLLAACRVQGN 654
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/801 (33%), Positives = 455/801 (56%), Gaps = 7/801 (0%)
Query: 35 SNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDF 94
+NG+ ++ + M+ L ++VD F +++ C + + G+K++ + L
Sbjct: 71 ANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVE 130
Query: 95 IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRV 154
+ N+ +AM+ + + A +F +M E+ ++ WN ++ Y+ G EA+ L+ M V
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSER-NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWV 189
Query: 155 GLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
G V + YTF L+ C G E+H V+ G L + V NALI MY +CG +
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249
Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
A + ++ +D +SWN+M++G+ +N + + ++ F ++G PD + + +SA
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
LG+ G+++HAY I GF D+ + N+L MY ++F +M +D +SWTT+
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
I+GY N KA++ +R + + + D + + +VL AC+ L + E+H I+ L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 394 -SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYL 452
S +++ N ++++Y KC ID + ++F +I K+V+SWTS+I+ N EAL +F
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLR 488
Query: 453 MNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGA 512
+ ++ ++ITL +AL+A + + L GKE++ ++R G L+ + ++L+DMY RCG
Sbjct: 489 QMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGR 548
Query: 513 LDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYA 572
++ A FN Q KD+ W ++ G+G + ++LF +M PD ITF++LL
Sbjct: 549 MNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCG 607
Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
CS S ++ +G + M DY + P +HYAC+VDLLGRA L+EA++F++ M + P
Sbjct: 608 CSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA 666
Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
VW ALL ACR+H +LGE+ A+ + ELD + G Y+L+ N++A KW++V +VR M+
Sbjct: 667 VWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMK 726
Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
+GL G SW+E+ K+H+F++ DK H ++ EI L EK+ E G ++
Sbjct: 727 ENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMS-EVGLTKISESSS 785
Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
+ E + ++ GHSER AIA+G++ + G I +TKNL +C +CH K +S+ RE
Sbjct: 786 MDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRRE 845
Query: 813 LVVRDANRFHHFEAGVCSCGD 833
+ VRDA FHHF+ G CSCGD
Sbjct: 846 ISVRDAEHFHHFKDGECSCGD 866
Score = 315 bits (806), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 318/578 (55%), Gaps = 11/578 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
M+ + G+++DA +F K+S+R +F+WN ++G Y G + Y RM V G+ D +
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 60 TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
TFPCV++ C + DL G ++H V++ GY+ +VN+L+ MY KC D + AR LFDRM
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
+ D++ WN++IS Y +G C E L LF M+ + + + T + + ACE LG
Sbjct: 258 -PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
+IHA + +G + + V N+L MY G EA + ++E KD VSW +M++G+ N
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
L KA+ +R + KPD++ +SA LG+L G ELH AIK +S + +
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
N L++MY+KC C++ +F+ + ++ ISWT+IIAG NN +AL R +++ L
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQ 495
Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNV 418
+ + + + L AC+ + + KEIH +++R G+ D + NA++D+Y +CG ++ + +
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
F S + KDV SW +++ Y G + +ELF M ++ V D IT +S L S ++
Sbjct: 556 FNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINA 537
++G + G + +VD+ R G L A+K + T D +W +++NA
Sbjct: 615 RQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
Query: 538 NGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYA 572
+H + G+++ ++++ +S + L LYA
Sbjct: 675 CRIHHKIDLGELSAQHIFELDKKSVG--YYILLCNLYA 710
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/669 (37%), Positives = 389/669 (58%), Gaps = 33/669 (4%)
Query: 199 NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL-QGAGQ 257
N L+ Y++ G ++E +L ++D V+WN ++ G+ + L A++ + + +
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
+V + + S G++ GK++H IK GF S L +G+ L+ MYA C++ +
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 318 VFYQM------------------------------TAQDFISWTTIIAGYAQNNCHLKAL 347
VFY + +D +SW +I G AQN +A+
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD-LVILNAIVDVY 406
E FR ++++GL D GSVL AC GL +++ K+IH IIR D + + +A++D+Y
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLV 466
KC + Y++ VF+ ++ K+VVSWT+M+ Y G A EA+++F M + ++ D TL
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 467 SALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK 526
A+SA +++S L++G + +G I G +V++SLV +Y +CG +D + ++FN + +
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 527 DLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFL 586
D + WT+M++A GR I LF KM PD +T ++ ACS +GL+ +G+++
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Query: 587 EIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSN 646
++M +Y + P HY+C++DL R+ LEEA +F+ M P A W LL ACR N
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Query: 647 KELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIE 706
E+G+ A+ L+ELDP +P Y L+S+++A+ KW V Q+R MR +KK PG SWI+
Sbjct: 556 LEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615
Query: 707 IGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
K+HSF A D+S D+IY KL E+ K+ + GY T FV H+VEE KV+ML
Sbjct: 616 WKGKLHSFSADDESSPYLDQIYAKLEELNNKI-IDNGYKPDTSFVHHDVEEAVKVKMLNY 674
Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
HSERLAIA+G++ G IR+ KNLRVCVDCH+ K +S + GRE++VRDA RFH F+
Sbjct: 675 HSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 734
Query: 827 GVCSCGDYW 835
G CSCGD+W
Sbjct: 735 GTCSCGDFW 743
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/562 (28%), Positives = 275/562 (48%), Gaps = 73/562 (12%)
Query: 80 IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASG 139
IHG +++ F+ N++V YA AR++FDR+ + ++ WN+++ AYS +G
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRI-PQPNLFSWNNLLLAYSKAG 86
Query: 140 QCLEALGLFREMQR------------------VGLVTNAY--------------TFVAAL 167
E F ++ VG AY T + L
Sbjct: 87 LISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTML 146
Query: 168 QACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN---- 223
+ + +LG +IH +K G + V + L+ MYA G +++A V Y L++
Sbjct: 147 KLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTV 206
Query: 224 --------------------------KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQ 257
KDSVSW +M+ G QN L +A++ FRE++ G
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGL 266
Query: 258 KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
K DQ + + A G LG + GK++HA I+ F + +G+ L+DMY KC C++Y
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT 326
Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
VF +M ++ +SWT ++ GY Q +A+++F +Q G+D D +G + AC+ +
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 378 MSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISS 436
+ + + HG I GL V + N++V +YGKCG+ID S +F + +D VSWT+M+S+
Sbjct: 387 LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA 446
Query: 437 YVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
Y G A E ++LF M + ++ D +TL +SA S +++KG+ + + + +
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE-YGIV 505
Query: 497 GSVA--SSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR---GKVAIDL 550
S+ S ++D+++R G L+ A + N + D I WT++++A G GK A +
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAES 565
Query: 551 FYKMEAESFAPDHITFLALLYA 572
+E + P T L+ +YA
Sbjct: 566 L--IELDPHHPAGYTLLSSIYA 585
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 250/526 (47%), Gaps = 54/526 (10%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETY-SRMRVLGISVDAFT 60
Y K G + + E F+K+ R TWN ++ Y +G ++ Y + MR ++ T
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLF---- 116
++K + + G +IHG V+K G++S + + L+ MYA A+++F
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 117 DR-------------------------MGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
DR G ++D V W ++I + +G EA+ FREM
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKM 211
+ GL + Y F + L AC G +IHA +++ +YV +ALI MY +C +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 212 TEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSAS 271
A V +++ K+ VSW +M+ G+ Q +A++ F ++Q +G PD A+SA
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
+ +L G + H AI G + + + N+L+ +Y KC ++ R+F +M +D +SWT
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK 391
+++ YAQ ++ ++LF + GL D + + V+ ACS + + + +
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMT-- 499
Query: 392 GLSDLVILNAI------VDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNGLAN 444
S+ I+ +I +D++ + G ++ + + D + WT+++S+ + G
Sbjct: 500 --SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG--- 554
Query: 445 EALELFYLMNEANVESDS-----ITLVSALSAA----SSLSILKKG 481
LE+ E+ +E D TL+S++ A+ S++ L++G
Sbjct: 555 -NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRG 599
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 175/427 (40%), Gaps = 73/427 (17%)
Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
K +H I+ + + N ++ YA Y RVF ++ + SW ++ Y++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 341 NCHLKALELFRTVQ-LEGLDADVMIIGSVLMACSG------------------------- 374
+ F + +G+ +V+I G L G
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 375 LKCMSQT------KEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIES--- 424
LK S K+IHG +I+ G S L++ + ++ +Y G I ++ VF ++
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 425 ---------------------------KDVVSWTSMISSYVHNGLANEALELFYLMNEAN 457
KD VSW +MI NGLA EA+E F M
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 458 VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIAN 517
++ D S L A L + +GK+++ IIR F V S+L+DMY +C L A
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 518 KVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSG 577
VF+ ++ K+++ WT+M+ G GR + A+ +F M+ PDH T + AC++
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 578 LINEGKKFLEIMRCDYQLDPWPEHYAC----LVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
+ EG +F + HY LV L G+ ++++ + M + A
Sbjct: 386 SLEEGSQF-----HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVS 439
Query: 634 WCALLGA 640
W A++ A
Sbjct: 440 WTAMVSA 446
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 3/236 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KC + A+ +FD++ Q+ V +W AM+ Y G ++ + M+ GI D +T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
I ACA + L+ G++ HG + G + NSLV +Y KC D + +LF+ M
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
+ D V W +++SAY+ G+ +E + LF +M + GL + T + AC + G
Sbjct: 434 VR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 181 E-IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLT 234
T + G + + +I +++R G++ EA + + D++ W ++L+
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 270/836 (32%), Positives = 458/836 (54%), Gaps = 22/836 (2%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y K + +A +LFD++S RTVF W M+ A+ + E L + M G + FT
Sbjct: 67 LYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFT 126
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
F V+++CA L+D+ G ++HG V+K G++ + +SL +Y+KC F++A +LF +
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSL- 185
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL-- 178
+ D + W +IS+ + + EAL + EM + G+ N +TFV L A SSF L
Sbjct: 186 QNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA---SSFLGLEF 242
Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
G IH+ + G L V + +L+ Y++ KM +A VL +D W S+++GFV+
Sbjct: 243 GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVR 302
Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
N +A+ F E++ G +P+ +S + +L GK++H+ IK GF +
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 299 GNTLMDMYAKCCCVNY-MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
GN L+DMY KC RVF M + + +SWTT+I G + L +
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
++ +V+ + VL ACS L+ + + EIH Y++R+ + ++V+ N++VD Y +DY+
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 417 NVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
NV S++ +D +++TS+++ + G AL + M + D ++L +SA+++L
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMIN 536
L+ GK L+ + ++ GF+ SV +SLVDMY++CG+L+ A KVF + T D++ W +++
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Query: 537 ANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLD 596
+G A+ F +M + PD +TFL LL ACS+ L + G ++ ++M+ Y ++
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIE 662
Query: 597 PWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKK 656
P EHY LV +LGRA LEEA V +M ++P A ++ LL ACR N LGE +A K
Sbjct: 663 PQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANK 722
Query: 657 LLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIA 716
L L P +P Y+L+++++ S K + ++ R M L K G S +E+ K+HSF++
Sbjct: 723 GLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVS 782
Query: 717 RDKSH-SESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAY 775
D + +++ IY ++ I E+++R G E HS + A+ Y
Sbjct: 783 EDVTRVDKTNGIYAEIESIKEEIKRFGS----------PYRGNENASF---HSAKQAVVY 829
Query: 776 GVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
G + ++ + + + KN +C DCH F +++RL +++ VRD N+ H F+ G CSC
Sbjct: 830 GFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 226/467 (48%), Gaps = 9/467 (1%)
Query: 164 VAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLEN 223
+ L CE +S +G+ IH +K G + + N L+++Y + + A + ++ +
Sbjct: 28 IRILSFCESNS-SRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
+ +W M++ F ++ + A+ F E+ +G P++ + V + L ++ G +
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146
Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
H IK GF + +G++L D+Y+KC +F + D ISWT +I+
Sbjct: 147 HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKW 206
Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAI 402
+AL+ + + G+ + +L A S L + K IH II +G+ ++V+ ++
Sbjct: 207 REALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSL 265
Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
VD Y + ++ + V S +DV WTS++S +V N A EA+ F M ++ ++
Sbjct: 266 VDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325
Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI-ANKVFN 521
T + LS S++ L GK+++ I+ GF V ++LVDMY +C A ++ A++VF
Sbjct: 326 FTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFG 385
Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
+ + +++ WT++I HG + L +M P+ +T +L ACS +
Sbjct: 386 AMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK---LRH 442
Query: 582 GKKFLEIMR--CDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
++ LEI +D LVD + ++ A+ +RSM+
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK 489
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 12/287 (4%)
Query: 384 IHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGL 442
IH +I+ GL +L + N ++ +Y K I +R +F+ + + V +WT MIS++ +
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 443 ANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS 502
AL LF M + + T S + + + L + G ++G +I+ GF V SS
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164
Query: 503 LVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPD 562
L D+Y++CG A ++F+ +Q D I WT MI++ + + A+ + +M P+
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPN 224
Query: 563 HITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY---ACLVDLLGRANHLEEAY 619
TF+ LL A S GL +F + + + + P + LVD + + +E+A
Sbjct: 225 EFTFVKLLGASSFLGL-----EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 620 QFVRSMQIEPTAEVWCALL-GACRVHSNKE-LGEIVAKKLLELDPGN 664
+ + S E +W +++ G R KE +G + + L L P N
Sbjct: 280 RVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/682 (37%), Positives = 386/682 (56%), Gaps = 8/682 (1%)
Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
V+ L+ C G ++H +KSG L + +N LI MY +C + A V +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 222 ENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
++ VSW+++++G V N ++ F E+ G P++ + A G L L G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 282 ELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNN 341
++H + +K GF +++GN+L+DMY+KC +N +VF ++ + ISW +IAG+
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 342 CHLKALELFRTVQLEGLD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDL 396
KAL+ F +Q + D + S+L ACS + K+IHG+++R G S
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
I ++VD+Y KCG + +R F+ I+ K ++SW+S+I Y G EA+ LF + E
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
N + DS L S + + ++L++GK++ ++ LE SV +S+VDMY +CG +D A
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
K F +Q KD+I WT +I G HG GK ++ +FY+M + PD + +LA+L ACSHS
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
G+I EG++ + + + P EHYAC+VDLLGRA L+EA + +M I+P +W
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
LL CRVH + ELG+ V K LL +D NP NYV++SN++ + W + R GL
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
KK G SW+EI ++H F + + SH + I + L E +L E GYV + LH+++
Sbjct: 548 KKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDID 607
Query: 757 EEEKVQMLYGHSERLAIAYGVLK---STEGSLIRITKNLRVCVDCHSFCKLVSRLFGREL 813
+E K + L HSE+LAI + + +G IR+ KNLRVCVDCH F K +S++
Sbjct: 608 DESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAY 667
Query: 814 VVRDANRFHHFEAGVCSCGDYW 835
VVRDA RFH FE G CSCGDYW
Sbjct: 668 VVRDAVRFHSFEDGCCSCGDYW 689
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/529 (29%), Positives = 281/529 (53%), Gaps = 17/529 (3%)
Query: 64 VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
+++ C D G ++H +LK G N L+ MY KC + A ++FD M E+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER- 70
Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
+VV W++++S + +G +L LF EM R G+ N +TF L+AC + G++IH
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 184 AATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYC 243
+K G + V V N+L+ MY++CG++ EA V ++ ++ +SWN+M+ GFV
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 244 KAMQFFRELQGAG--QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--VSDLQIG 299
KA+ F +Q A ++PD+ + + A G + GK++H + ++ GF S I
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
+L+D+Y KC + + F Q+ + ISW+++I GYAQ ++A+ LF+ +Q
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNIDYSRN 417
D + S++ + + Q K++ ++ GL + +LN++VD+Y KCG +D +
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL-ETSVLNSVVDMYLKCGLVDEAEK 369
Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
F ++ KDV+SWT +I+ Y +GL +++ +FY M N+E D + ++ LSA S +
Sbjct: 370 CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429
Query: 478 LKKGKEL-NGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI-LWTSMI 535
+K+G+EL + + G + +VD+ R G L A + + + K + +W +++
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Query: 536 NANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
+ +HG GK + +++A++ P + ++ LY +G NE
Sbjct: 490 SLCRVHGDIELGKEVGKILLRIDAKN--PANYVMMSNLYG--QAGYWNE 534
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 232/442 (52%), Gaps = 8/442 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KC L A ++FD + +R V +W+A++ +V NG+ L +S M GI + FT
Sbjct: 50 MYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFT 109
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
F +KAC +L L+ G +IHG LK G++ + NSLV MY+KC +A ++F R+
Sbjct: 110 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLV--TNAYTFVAALQACEDSSFETL 178
++ ++ WN++I+ + +G +AL F MQ + + +T + L+AC +
Sbjct: 170 DR-SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 228
Query: 179 GMEIHAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
G +IH V+SG + + +L+ +Y +CG + A Q++ K +SW+S++ G+
Sbjct: 229 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288
Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
Q + +AM F+ LQ + D + + L GK++ A A+K +
Sbjct: 289 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 348
Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
+ N+++DMY KC V+ + F +M +D ISWT +I GY ++ K++ +F +
Sbjct: 349 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 408
Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNA-IVDVYGKCGNIDY 414
++ D + +VL ACS + + +E+ ++ G+ V A +VD+ G+ G +
Sbjct: 409 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468
Query: 415 SRNVFESIESKDVVS-WTSMIS 435
++++ +++ K V W +++S
Sbjct: 469 AKHLIDTMPIKPNVGIWQTLLS 490
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/692 (36%), Positives = 409/692 (59%), Gaps = 38/692 (5%)
Query: 181 EIHAATVKSGQNLQVYVANALIAMYA--RCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
+ H +++G Y A+ L AM A + A V ++ +S +WN+++ +
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 239 NDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
++ F ++ Q P++ + A+ + +L G+ LH A+K SD+
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167
Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
+ N+L+ Y C ++ +VF + +D +SW ++I G+ Q KALELF+ ++ E
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSR 416
+ A + + VL AC+ ++ + +++ YI ++ +L + NA++D+Y KCG+I+ ++
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 417 NVFESIESKDVVSWTSM-------------------------------ISSYVHNGLANE 445
+F+++E KD V+WT+M IS+Y NG NE
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347
Query: 446 ALELFY-LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
AL +F+ L + N++ + ITLVS LSA + + L+ G+ ++ +I + G + V S+L+
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
MY++CG L+ + +VFN V+ +D+ +W++MI +HG G A+D+FYKM+ + P+ +
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
TF + ACSH+GL++E + M +Y + P +HYAC+VD+LGR+ +LE+A +F+ +
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527
Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
M I P+ VW ALLGAC++H+N L E+ +LLEL+P N G +VL+SN++A KW++V
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENV 587
Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
++R MR +GLKK PG S IEI IH F++ D +H S+++Y KL E+ EKL + GY
Sbjct: 588 SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKL-KSNGY 646
Query: 745 VAQTQFVLHNVEEEE-KVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCK 803
+ VL +EEEE K Q L HSE+LAI YG++ + +IR+ KNLRVC DCHS K
Sbjct: 647 EPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAK 706
Query: 804 LVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
L+S+L+ RE++VRD RFHHF G CSC D+W
Sbjct: 707 LISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 148/522 (28%), Positives = 256/522 (49%), Gaps = 42/522 (8%)
Query: 64 VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYA--KCYDFRKARQLFDRMGE 121
+I+ C L+ L + HG +++ G S + + L AM A AR++FD +
Sbjct: 36 LIERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI-P 91
Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETLGM 180
K + WN++I AY++ + ++ F +M N YTF ++A + S +LG
Sbjct: 92 KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
+H VKS V+VAN+LI Y CG + A V ++ KD VSWNSM+ GFVQ
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
KA++ F++++ K V V +SA ++ NL G+++ +Y + +L + N
Sbjct: 212 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA---------------------- 338
++DMY KC + R+F M +D ++WTT++ GYA
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 339 ---------QNNCHLKALELFRTVQLE-GLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
QN +AL +F +QL+ + + + + S L AC+ + + + IH YI
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 389 IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
+ G+ + + +A++ +Y KCG+++ SR VF S+E +DV W++MI +G NEA+
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL-NGFIIRKGFNLEGSVASSLVDM 506
++FY M EANV+ + +T + A S ++ + + L + G E + +VD+
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 507 YARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGRGKVA 547
R G L+ A K + +W +++ A +H +A
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 553
Score = 182 bits (462), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 223/464 (48%), Gaps = 41/464 (8%)
Query: 11 AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGIS---VDAFTFPCVIKA 67
A ++FD++ + F WN ++ AY S +P VL ++ + ++ S + +TFP +IKA
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDP--VLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
Query: 68 CAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVL 127
A + L G +HG+ +K S F+ NSL+ Y C D A ++F + EK DVV
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK-DVVS 199
Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
WNS+I+ + G +AL LF++M+ + + T V L AC G ++ +
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV---------- 237
++ N+ + +ANA++ MY +CG + +A + +E KD+V+W +ML G+
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319
Query: 238 ---------------------QNDLYCKAMQFFRELQ-GAGQKPDQVCTVNAVSASGRLG 275
QN +A+ F ELQ K +Q+ V+ +SA ++G
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 276 NLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIA 335
L G+ +H+Y K G + + + L+ MY+KC + VF + +D W+ +I
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 336 GYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI-HGYIIRKGL- 393
G A + C +A+++F +Q + + + +V ACS + + + + H G+
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 394 SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS 436
+ IVDV G+ G ++ + E++ S W +++ +
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 167/364 (45%), Gaps = 41/364 (11%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y CG + A ++F + ++ V +WN+M+ +V G P + LE + +M + T
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
V+ ACA +++L+ G ++ + + + + N+++ MY KC A++LFD M E
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 122 KE------------------------------DVVLWNSIISAYSASGQCLEALGLFREM 151
K+ D+V WN++ISAY +G+ EAL +F E+
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 152 Q-RVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
Q + + N T V+ L AC LG IH+ K G + +V +ALI MY++CG
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD 415
Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
+ ++ V +E +D W++M+ G + +A+ F ++Q A KP+ V N A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Query: 271 SGRLGNLLNGKEL-HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
G + + L H G V + + YA C V+ +GR Y A FI
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEK-------HYA--CIVDVLGRSGYLEKAVKFIE 526
Query: 330 WTTI 333
I
Sbjct: 527 AMPI 530
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 220/465 (47%), Gaps = 56/465 (12%)
Query: 259 PDQVCTVNA----VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA--KCCCV 312
P+Q T N +S R +L K+ H + I+ G SD + L M A +
Sbjct: 21 PNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASL 80
Query: 313 NYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-LDADVMIIGSVLMA 371
Y +VF ++ + +W T+I YA + ++ F + E + ++ A
Sbjct: 81 EYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
Query: 372 CSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSW 430
+ + +S + +HG ++ + SD+ + N+++ Y CG++D + VF +I+ KDVVSW
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSW 200
Query: 431 TSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR 490
SMI+ +V G ++ALELF M +V++ +T+V LSA + + L+ G+++ +I
Sbjct: 201 NSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE 260
Query: 491 KGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGL---------- 540
N+ ++A++++DMY +CG+++ A ++F+ ++ KD + WT+M++ +
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 541 ---------------------HGRGKVAIDLFYKMEAE-SFAPDHITFLALLYACSHSGL 578
+G+ A+ +F++++ + + + IT ++ L AC+ G
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 579 INEGKKFLEI-----MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
+ G+ +R ++ + + L+ + + LE++ + S++ + V
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVT------SALIHMYSKCGDLEKSREVFNSVE-KRDVFV 433
Query: 634 WCALLGACRVHSNKELGEIVAKKLLELDPGN-PGNYVLISNVFAA 677
W A++G +H G ++ N N V +NVF A
Sbjct: 434 WSAMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 33/202 (16%)
Query: 1 MYGKCGSVLDAEQLFD-------------------------------KVSQRTVFTWNAM 29
MY KCGS+ DA++LFD + Q+ + WNA+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 30 LGAYVSNGEPLRVLETYSRMRVL-GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCG 88
+ AY NG+P L + +++ + ++ T + ACA + L+ G IH + K G
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 89 YDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLF 148
+ ++L+ MY+KC D K+R++F+ + EK DV +W+++I + G EA+ +F
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSV-EKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 149 REMQRVGLVTNAYTFVAALQAC 170
+MQ + N TF AC
Sbjct: 455 YKMQEANVKPNGVTFTNVFCAC 476
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KCG + + ++F+ V +R VF W+AM+G +G ++ + +M+ + + T
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
Query: 61 FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
F V AC+ +D + H + G + +V + + KA + + M
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Query: 120 GEKEDVVLWNSIISA 134
+W +++ A
Sbjct: 529 PIPPSTSVWGALLGA 543
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 479 bits (1233), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/740 (36%), Positives = 421/740 (56%), Gaps = 49/740 (6%)
Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIH 183
D+ WN IS+Y +G+C EAL +F+ M R V+ L+ E L E+
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 184 AATVKS----------GQNL-------------QVYVANALIAMYARCGKMTEAAGVLYQ 220
+ S +NL V N +++ YA+ G + +A V +
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
+ K+ VSWN++L+ +VQN +A F+ + VS + LG +
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA----------LVSWNCLLGGFVKK 232
Query: 281 KELHAYAIKQGF----VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
K++ +Q F V D+ NT++ YA+ ++ ++F + QD +WT +++G
Sbjct: 233 KKI--VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 337 YAQNNCHLKALELF-RTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD 395
Y QN +A ELF + + + + M+ G V G + M KE+ + + +S
Sbjct: 291 YIQNRMVEEARELFDKMPERNEVSWNAMLAGYV----QGER-MEMAKELFDVMPCRNVS- 344
Query: 396 LVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE 455
N ++ Y +CG I ++N+F+ + +D VSW +MI+ Y +G + EAL LF M
Sbjct: 345 --TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 456 ANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDI 515
+ + SALS + + L+ GK+L+G +++ G+ V ++L+ MY +CG+++
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 516 ANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSH 575
AN +F + KD++ W +MI HG G+VA+ F M+ E PD T +A+L ACSH
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522
Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
+GL+++G+++ M DY + P +HYAC+VDLLGRA LE+A+ +++M EP A +W
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582
Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
LLGA RVH N EL E A K+ ++P N G YVL+SN++A+S +W DV ++R+RMR G
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642
Query: 696 LKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNV 755
+KK PG SWIEI NK H+F D+ H E DEI+ L E+ ++ ++ GYV++T VLH+V
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRM-KKAGYVSKTSVVLHDV 701
Query: 756 EEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVV 815
EEEEK +M+ HSERLA+AYG+++ + G IR+ KNLRVC DCH+ K ++R+ GR +++
Sbjct: 702 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIIL 761
Query: 816 RDANRFHHFEAGVCSCGDYW 835
RD NRFHHF+ G CSCGDYW
Sbjct: 762 RDNNRFHHFKDGSCSCGDYW 781
Score = 196 bits (497), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 153/589 (25%), Positives = 284/589 (48%), Gaps = 53/589 (8%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y + G +A ++F ++ + + ++N M+ Y+ NGE + + M D ++
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM----PERDLVSW 129
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLK---CGYDSTDFIVNSLVAMYAK--CYDFRKARQLF 116
+IK ++L ++ ++ + C + N++++ YA+ C D AR +F
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPERDVCSW-------NTMLSGYAQNGCVD--DARSVF 180
Query: 117 DRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFE 176
DRM EK DV WN+++SAY + + EA LF+ + LV+ C F
Sbjct: 181 DRMPEKNDVS-WNALLSAYVQNSKMEEACMLFKSRENWALVS---------WNCLLGGFV 230
Query: 177 TLGMEIHAATVKSGQNLQVYVA-NALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
+ A N++ V+ N +I YA+ GK+ EA + + +D +W +M++G
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF--- 292
++QN + +A + F D++ N VS + L + G+ + K+ F
Sbjct: 291 YIQNRMVEEARELF----------DKMPERNEVSWNAMLAGYVQGERME--MAKELFDVM 338
Query: 293 -VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
++ NT++ YA+C ++ +F +M +D +SW +IAGY+Q+ +AL LF
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 352 TVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCG 410
++ EG + S L C+ + + K++HG +++ G + + NA++ +Y KCG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 411 NIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALS 470
+I+ + ++F+ + KD+VSW +MI+ Y +G AL F M ++ D T+V+ LS
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 471 AASSLSILKKGKELNGFIIRK-GFNLEGSVASSLVDMYARCGAL-DIANKVFNCVQTKDL 528
A S ++ KG++ + + G + +VD+ R G L D N + N D
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578
Query: 529 ILWTSMINANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACS 574
+W +++ A+ +HG + A D + ME E+ L+ LYA S
Sbjct: 579 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSG--MYVLLSNLYASS 625
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 183/377 (48%), Gaps = 14/377 (3%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y + G + +A QLFD+ + VFTW AM+ Y+ N E + +M + ++
Sbjct: 260 YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSW 315
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
++ + ++ ++ V+ C ST N+++ YA+C +A+ LFD+M
Sbjct: 316 NAMLAGYVQGERMEMAKELFD-VMPCRNVST---WNTMITGYAQCGKISEAKNLFDKM-P 370
Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
K D V W ++I+ YS SG EAL LF +M+R G N +F +AL C D LG +
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
+H VK G +V NAL+ MY +CG + EA + ++ KD VSWN+M+ G+ ++
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGF 490
Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ--GFVSDLQIG 299
A++FF ++ G KPD V +SA G + G++ + Y + Q G + + Q
Sbjct: 491 GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ-YFYTMTQDYGVMPNSQHY 549
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQLEG 357
++D+ + + + M + D W T++ A N L + +E
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609
Query: 358 LDADVMIIGSVLMACSG 374
++ + ++ S L A SG
Sbjct: 610 ENSGMYVLLSNLYASSG 626
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 138/300 (46%), Gaps = 23/300 (7%)
Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
SD++ N + Y + N RVF +M +S+ +I+GY +N A +LF +
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 354 QLEGLDA-DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNI 412
L + +VMI G V + + + +E+ + + D+ N ++ Y + G +
Sbjct: 122 PERDLVSWNVMIKGYVRN-----RNLGKARELFEIMPER---DVCSWNTMLSGYAQNGCV 173
Query: 413 DYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAA 472
D +R+VF+ + K+ VSW +++S+YV N EA LF ++ LVS
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK-------SRENWALVSWNCLL 226
Query: 473 SSLSILKKGKELNGFIIRKGFNLEGSVA-SSLVDMYARCGALDIANKVFNCVQTKDLILW 531
KK E F N+ V+ ++++ YA+ G +D A ++F+ +D+ W
Sbjct: 227 GGFVKKKKIVEARQFF--DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
T+M++ + + A +LF KM + +++ A+L + K+ ++M C
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPC 340
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KCGS+ +A LF +++ + + +WN M+ Y +G L + M+ G+ D T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 61 FPCVIKACAMLKDLDCGAK-IHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
V+ AC+ +D G + + + G +V + + A L M
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 120 GEKEDVVLWNSIISAYSASG 139
+ D +W +++ A G
Sbjct: 573 PFEPDAAIWGTLLGASRVHG 592
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 20/213 (9%)
Query: 379 SQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
SQTK + ++ G SD+ N + Y + G + + VF+ + VS+ MIS Y+
Sbjct: 51 SQTKPL----LKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYL 106
Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
NG A +LF M E ++ S ++ + + + L K +EL F I E
Sbjct: 107 RNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRN----LGKAREL--FEIMP----ERD 156
Query: 499 VAS--SLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA 556
V S +++ YA+ G +D A VF+ + K+ + W ++++A + + + A LF E
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
Query: 557 ESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
+ +++ LL I E ++F + M
Sbjct: 217 WAL----VSWNCLLGGFVKKKKIVEARQFFDSM 245
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/726 (33%), Positives = 404/726 (55%), Gaps = 72/726 (9%)
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
+ HA +KSG Y++ LIA Y+ +A VL + + S++S++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
L+ +++ F + G PD N L GK++H + G D +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQD---------------------------------- 326
++ MY +C + +VF +M+ +D
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 327 -FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIH 385
+SW I++G+ ++ H +A+ +F+ + G D + + SVL + + ++ + IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 386 GYIIRKGL-SDLVILNAIVDVYGKCGNI-------------------------------D 413
GY+I++GL D +++A++D+YGK G++ D
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 414 YSRNVFESIESK----DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSAL 469
+ +FE + + +VVSWTS+I+ NG EALELF M A V+ + +T+ S L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLI 529
A +++ L G+ +GF +R V S+L+DMYA+CG ++++ VFN + TK+L+
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 530 LWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIM 589
W S++N +HG+ K + +F + PD I+F +LL AC GL +EG K+ ++M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 590 RCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKEL 649
+Y + P EHY+C+V+LLGRA L+EAY ++ M EP + VW ALL +CR+ +N +L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 650 GEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGN 709
EI A+KL L+P NPG YVL+SN++AA W +V+ +R +M GLKK PG SWI++ N
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 710 KIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSE 769
++++ +A DKSH + D+I +K+ EI++++ R+ G+ F LH+VEE+E+ QML+GHSE
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEM-RKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694
Query: 770 RLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
+LA+ +G+L + +G+ +++ KNLR+C DCH+ K +S GRE+ +RD NRFHHF+ G+C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754
Query: 830 SCGDYW 835
SCGD+W
Sbjct: 755 SCGDFW 760
Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 146/569 (25%), Positives = 265/569 (46%), Gaps = 81/569 (14%)
Query: 81 HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
H +LK G + +I L+A Y+ F A + + + + ++S+I A + +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPT-IYSFSSLIYALTKAKL 96
Query: 141 CLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANA 200
+++G+F M GL+ +++ + C + S +G +IH + SG ++ +V +
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 201 LIAMYARCGKMTEAAGVLYQLENKDS---------------------------------- 226
+ MY RCG+M +A V ++ +KD
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 227 -VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELH 284
VSWN +L+GF ++ + +A+ F+++ G PDQV TV++V S +LN G+ +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV-TVSSVLPSVGDSEMLNMGRLIH 275
Query: 285 AYAIKQGFVSDLQIGNTLMDMYAKC-------------------CCVNY----------- 314
Y IKQG + D + + ++DMY K C Y
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 315 ----MGRVFYQMTAQ-DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVL 369
M +F + T + + +SWT+IIAG AQN ++ALELFR +Q+ G+ + + I S+L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 370 MACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
AC + + + HG+ +R L D V + +A++D+Y KCG I+ S+ VF + +K++V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGF 487
W S+++ + +G A E + +F + ++ D I+ S LSA + + +G K
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 488 IIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR--- 543
G S +V++ R G L A + + D +W +++N+ L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYA 572
++A + + +E E+ P L+ +YA
Sbjct: 576 AEIAAEKLFHLEPEN--PGTYVLLSNIYA 602
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 218/504 (43%), Gaps = 82/504 (16%)
Query: 10 DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
DA+ + + T++++++++ A + + +SRM G+ D+ P + K CA
Sbjct: 68 DADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCA 127
Query: 70 MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------ 123
L G +IH + G D F+ S+ MY +C AR++FDRM +K+
Sbjct: 128 ELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSA 187
Query: 124 ----------------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVG 155
++V WN I+S ++ SG EA+ +F+++ +G
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG 247
Query: 156 LVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAA 215
+ T + L + DS +G IH +K G V +A+I MY + G +
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII 307
Query: 216 GVLYQLENKDS-----------------------------------VSWNSMLTGFVQND 240
+ Q E ++ VSW S++ G QN
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
+A++ FRE+Q AG KP+ V + + A G + L +G+ H +A++ + ++ +G+
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGS 427
Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
L+DMYAKC +N VF M ++ + W +++ G++ + + + +F ++ L
Sbjct: 428 ALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487
Query: 361 DVMIIGSVLMAC-------SGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNID 413
D + S+L AC G K E +G R L + +V++ G+ G +
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPR-----LEHYSCMVNLLGRAGKLQ 542
Query: 414 YSRNVFESIE-SKDVVSWTSMISS 436
+ ++ + + D W ++++S
Sbjct: 543 EAYDLIKEMPFEPDSCVWGALLNS 566
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 188/456 (41%), Gaps = 90/456 (19%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLE------------- 44
MY +CG + DA ++FD++S + V T +A+L AY G E +R+L
Sbjct: 160 MYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVS 219
Query: 45 -------------------TYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVL 85
+ ++ LG D T V+ + + L+ G IHG V+
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 86 KCGYDSTDFIVNSLVAMYAK---------------------CYDF----------RKARQ 114
K G ++++++ MY K C + KA +
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 115 LFDRMGEKE---DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
+F+ E+ +VV W SII+ + +G+ +EAL LFREMQ G+ N T + L AC
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACG 399
Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
+ + G H V+ V+V +ALI MYA+CG++ + V + K+ V WNS
Sbjct: 400 NIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS 459
Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQ 290
++ GF + + M F L KPD + + +SA G++G G K + +
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 519
Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS----------WTTIIAG-YAQ 339
G L+ Y+ C VN +GR A D I W ++ Q
Sbjct: 520 GIKPRLE-------HYS--CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 340 NNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGL 375
NN L + + LE + ++ S + A G+
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGM 606
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/625 (38%), Positives = 383/625 (61%), Gaps = 11/625 (1%)
Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
++ D SWNS++ ++ +A+ F ++ P + A+ A L ++ +G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
K+ H A G+ SD+ + + L+ MY+ C + +VF ++ ++ +SWT++I GY N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 341 NCHLKALELFRTVQL-EGLDADVMIIGS-----VLMACSGLKCMSQTKEIHGYIIRKGLS 394
L A+ LF+ + + E D D M + S V+ ACS + T+ IH ++I++G
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 395 DLV-ILNAIVDVYGKCGN--IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFY 451
V + N ++D Y K G + +R +F+ I KD VS+ S++S Y +G++NEA E+F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 452 -LMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARC 510
L+ V ++ITL + L A S L+ GK ++ +IR G + V +S++DMY +C
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 511 GALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALL 570
G ++ A K F+ ++ K++ WT+MI G+HG A++LF M P++ITF+++L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 571 YACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT 630
ACSH+GL EG ++ M+ + ++P EHY C+VDLLGRA L++AY ++ M+++P
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 631 AEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMR 690
+ +W +LL ACR+H N EL EI +L ELD N G Y+L+S+++A + +WKDVE+VRM
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515
Query: 691 MRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQF 750
M+ GL K PG S +E+ ++H F+ D+ H + ++IY+ LAE+ KL E GYV+ T
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL-LEAGYVSNTSS 574
Query: 751 VLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFG 810
V H+V+EEEK L HSE+LAIA+G++ + GS + + KNLRVC DCH+ KL+S++
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVD 634
Query: 811 RELVVRDANRFHHFEAGVCSCGDYW 835
RE VVRDA RFHHF+ G CSCGDYW
Sbjct: 635 REFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 253/472 (53%), Gaps = 15/472 (3%)
Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSS 174
LF+R +K DV WNS+I+ + SG EAL F M+++ L +F A++AC S
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS-SL 89
Query: 175 FETL-GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
F+ G + H G ++V++ALI MY+ CGK+ +A V ++ ++ VSW SM+
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 234 TGFVQNDLYCKAMQFFREL------QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
G+ N A+ F++L D + V+ +SA R+ + +H++
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 288 IKQGFVSDLQIGNTLMDMYAKC--CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK 345
IK+GF + +GNTL+D YAK V ++F Q+ +D +S+ +I++ YAQ+ +
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 346 ALELFRT-VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIV 403
A E+FR V+ + + + + + +VL+A S + K IH +IR GL D VI+ +I+
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
D+Y KCG ++ +R F+ +++K+V SWT+MI+ Y +G A +ALELF M ++ V + I
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 464 TLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
T VS L+A S + +G + N R G +VD+ R G L A +
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 523 VQTK-DLILWTSMINANGLHGRGKVA-IDLFYKMEAESFAPDHITFLALLYA 572
++ K D I+W+S++ A +H ++A I + E +S + L+ +YA
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA 501
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 228/446 (51%), Gaps = 34/446 (7%)
Query: 14 LFDKVSQRT-VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLK 72
LF++ +T VF+WN+++ +G+ L +S MR L + +FPC IKAC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 73 DLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSII 132
D+ G + H GY S F+ ++L+ MY+ C AR++FD + K ++V W S+I
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI-PKRNIVSWTSMI 149
Query: 133 SAYSASGQCLEALGLFREM------QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAAT 186
Y +G L+A+ LF+++ + ++ V+ + AC + L IH+
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 187 VKSGQNLQVYVANALIAMYARCGK--MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
+K G + V V N L+ YA+ G+ + A + Q+ +KD VS+NS+++ + Q+ + +
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRL------GNLLNGKELHAYAIKQGFVSDLQI 298
A + FR L ++V T NA++ S L G L GK +H I+ G D+ +
Sbjct: 270 AFEVFRRLV-----KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324
Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
G +++DMY KC V + F +M ++ SWT +IAGY + KALELF + G+
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
+ + SVL ACS G + + K G + GL +VD+ G+ G
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG--VEPGLEH---YGCMVDLLGRAGF 439
Query: 412 IDYSRNVFESIESK-DVVSWTSMISS 436
+ + ++ + ++ K D + W+S++++
Sbjct: 440 LQKAYDLIQRMKMKPDSIIWSSLLAA 465
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 205/422 (48%), Gaps = 18/422 (4%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRV------LGI 54
MY CG + DA ++FD++ +R + +W +M+ Y NG L + + + V +
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 55 SVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYD--FRKA 112
+D+ VI AC+ + IH V+K G+D + N+L+ YAK + A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACE 171
R++FD++ +K D V +NSI+S Y+ SG EA +FR + + +VT NA T L A
Sbjct: 240 RKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298
Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
S +G IH ++ G V V ++I MY +CG++ A +++NK+ SW +
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358
Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-KELHAYAIKQ 290
M+ G+ + KA++ F + +G +P+ + V+ ++A G + G + +A +
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRF 418
Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIAG-YAQNNCHLKALE 348
G L+ ++D+ + + + +M + D I W++++A N L +
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEIS 478
Query: 349 LFRTVQLEGLDADVMIIGSVLMACSG-LKCMSQTKEI---HGYIIRKGLSDLVILNAIVD 404
+ R +L+ + ++ S + A +G K + + + I G + G S L+ LN V
Sbjct: 479 VARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFS-LLELNGEVH 537
Query: 405 VY 406
V+
Sbjct: 538 VF 539
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/778 (33%), Positives = 427/778 (54%), Gaps = 107/778 (13%)
Query: 125 VVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHA 184
V L N++++ YS +G L A LF EM + A+++
Sbjct: 49 VYLMNNLMNVYSKTGYALHARKLFDEMP----LRTAFSW--------------------- 83
Query: 185 ATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCK 244
N +++ Y++ G M QL +DSVSW +M+ G+ Y K
Sbjct: 84 --------------NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHK 129
Query: 245 AMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMD 304
A++ ++ G +P Q N +++ + GK++H++ +K G ++ + N+L++
Sbjct: 130 AIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLN 189
Query: 305 MYAKC------------------CCVNYM-------GRV------FYQMTAQDFISWTTI 333
MYAKC N M G++ F QM +D ++W ++
Sbjct: 190 MYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSM 249
Query: 334 IAGYAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKG 392
I+G+ Q L+AL++F + + L D + SVL AC+ L+ + K+IH +I+ G
Sbjct: 250 ISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTG 309
Query: 393 LS-DLVILNAIVDVYGKCGNIDYSR---------------------------------NV 418
++LNA++ +Y +CG ++ +R N+
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369
Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
F S++ +DVV+WT+MI Y +G EA+ LF M +S TL + LS ASSL+ L
Sbjct: 370 FVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASL 429
Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINA 537
GK+++G ++ G SV+++L+ MYA+ G + A++ F+ ++ +D + WTSMI A
Sbjct: 430 SHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIA 489
Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
HG + A++LF M E PDHIT++ + AC+H+GL+N+G+++ ++M+ ++ P
Sbjct: 490 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIP 549
Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
HYAC+VDL GRA L+EA +F+ M IEP W +LL ACRVH N +LG++ A++L
Sbjct: 550 TLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERL 609
Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
L L+P N G Y ++N+++A KW++ ++R M+ +KK G SWIE+ +K+H F
Sbjct: 610 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVE 669
Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
D +H E +EIY + +I +++++ GYV T VLH++EEE K Q+L HSE+LAIA+G+
Sbjct: 670 DGTHPEKNEIYMTMKKIWDEIKKM-GYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGL 728
Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
+ + + + +RI KNLRVC DCH+ K +S+L GRE++VRD RFHHF+ G CSC DYW
Sbjct: 729 ISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/559 (27%), Positives = 259/559 (46%), Gaps = 102/559 (18%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGE-----------PLRVLETYSRM 49
+Y K G L A +LFD++ RT F+WN +L AY G+ P R +++ M
Sbjct: 58 VYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTM 117
Query: 50 --------------RVL------GISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGY 89
RV+ GI FT V+ + A + ++ G K+H ++K G
Sbjct: 118 IVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGL 177
Query: 90 DSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE-------------------------- 123
+ NSL+ MYAKC D A+ +FDRM ++
Sbjct: 178 RGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQ 237
Query: 124 ----DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETL 178
D+V WNS+IS ++ G L AL +F +M R L++ + +T + L AC + +
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297
Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARC------------------------------ 208
G +IH+ V +G ++ V NALI+MY+RC
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 209 ---GKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTV 265
G M +A + L+++D V+W +M+ G+ Q+ Y +A+ FR + G GQ+P+
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 266 NAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ 325
+S + L +L +GK++H A+K G + + + N L+ MYAK + R F + +
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 326 -DFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEI 384
D +SWT++I AQ+ +ALELF T+ +EGL D + V AC+ ++Q ++
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 385 HGYI--IRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS-YVHN 440
+ + K + L +VD++G+ G + ++ E + DVV+W S++S+ VH
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Query: 441 G--LANEALELFYLMNEAN 457
L A E L+ N
Sbjct: 598 NIDLGKVAAERLLLLEPEN 616
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 248/541 (45%), Gaps = 77/541 (14%)
Query: 92 TDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREM 151
T F N++++ Y+K D + FD++ ++ D V W ++I Y GQ +A+ + +M
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR-DSVSWTTMIVGYKNIGQYHKAIRVMGDM 137
Query: 152 QRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARC--- 208
+ G+ +T L + + G ++H+ VK G V V+N+L+ MYA+C
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 209 ----------------------------GKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
G+M A Q+ +D V+WNSM++GF Q
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257
Query: 241 LYCKAMQFF-RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
+A+ F + L+ + PD+ + +SA L L GK++H++ + GF +
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317
Query: 300 NTLMDMYAKCCCV---------------------------------NYMGRVFYQMTAQD 326
N L+ MY++C V N +F + +D
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 327 FISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG 386
++WT +I GY Q+ + +A+ LFR++ G + + ++L S L +S K+IHG
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 387 YIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISSYVHNGLAN 444
++ G + + + NA++ +Y K GNI + F+ I +D VSWTSMI + +G A
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 445 EALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASS-- 502
EALELF M + D IT V SA + ++ +G++ F + K + S
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYA 555
Query: 503 -LVDMYARCGALDIANKVFNCVQTK-DLILWTSMINANGLHGR---GKVAIDLFYKMEAE 557
+VD++ R G L A + + + D++ W S+++A +H GKVA + +E E
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPE 615
Query: 558 S 558
+
Sbjct: 616 N 616
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 200/447 (44%), Gaps = 67/447 (14%)
Query: 15 FDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRM-RVLGISVDAFTFPCVIKACAMLKD 73
F+++++R + TWN+M+ + G LR L+ +S+M R +S D FT V+ ACA L+
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 74 LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE---------- 123
L G +IH ++ G+D + ++N+L++MY++C AR+L ++ G K+
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 124 ----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAY 161
DVV W ++I Y G EA+ LFR M G N+Y
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414
Query: 162 TFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQL 221
T A L + + G +IH + VKSG+ V V+NALI MYA+ G +T A+ +
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLI 474
Query: 222 E-NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
+D+VSW SM+ Q+ +A++ F + G +PD + V SA G + G
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
++ + D+ + YA C V+ GR AQ+FI I
Sbjct: 535 RQYF------DMMKDVDKIIPTLSHYA--CMVDLFGRAGLLQEAQEFIEKMPI------- 579
Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN 400
+ DV+ GS+L AC K + K ++ + +
Sbjct: 580 ------------------EPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS 621
Query: 401 AIVDVYGKCGNIDYSRNVFESIESKDV 427
A+ ++Y CG + + + +S++ V
Sbjct: 622 ALANLYSACGKWEEAAKIRKSMKDGRV 648
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 127/291 (43%), Gaps = 73/291 (25%)
Query: 358 LDADVMI-IGSVLMACSGLKCMSQTKE--------IHGYIIRKGLS-DLVILNAIVDVYG 407
+DA V + + ++L C+ L S K +H +I+ GL + ++N +++VY
Sbjct: 1 MDAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYS 60
Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN---------- 457
K G ++R +F+ + + SW +++S+Y G + E F + + +
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 458 ---------------------VESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLE 496
+E TL + L++ ++ ++ GK+++ FI++ G
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 497 GSVASSLVDMYARC-------------------------------GALDIANKVFNCVQT 525
SV++SL++MYA+C G +D+A F +
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKMEAES-FAPDHITFLALLYACSH 575
+D++ W SMI+ G A+D+F KM +S +PD T ++L AC++
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/643 (37%), Positives = 376/643 (58%), Gaps = 44/643 (6%)
Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
L+ YA + A V ++ ++ + N M+ +V N Y + ++ F + G +PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 261 Q---VCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGR 317
C + A S SG ++ G+++H A K G S L +GN L+ MY KC ++
Sbjct: 140 HYTFPCVLKACSCSG---TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 318 VFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC 377
V +M+ +D +SW +++ GYAQN ALE+ R ++ + D + S+L A S
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS---- 252
Query: 378 MSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSY 437
+ T E N+ Y +++F + K +VSW MI Y
Sbjct: 253 -NTTTE---------------------------NVMYVKDMFFKMGKKSLVSWNVMIGVY 284
Query: 438 VHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEG 497
+ N + EA+EL+ M E D++++ S L A S L GK+++G+I RK
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 498 SVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAE 557
+ ++L+DMYA+CG L+ A VF ++++D++ WT+MI+A G GRG A+ LF K++
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 558 SFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
PD I F+ L ACSH+GL+ EG+ ++M Y++ P EH AC+VDLLGRA ++E
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464
Query: 618 AYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAA 677
AY+F++ M +EP VW ALLGACRVHS+ ++G + A KL +L P G YVL+SN++A
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524
Query: 678 SRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEK 737
+ +W++V +R M+ GLKK PG+S +E+ IH+F+ D+SH +SDEIY++L + +K
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKK 584
Query: 738 LEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTE-----GSLIRITKNL 792
+ +E GYV ++ LH+VEEE+K L HSE+LAI + ++ + E + IRITKNL
Sbjct: 585 M-KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNL 643
Query: 793 RVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
R+C DCH KL+S++ RE+++RD NRFH F GVCSCGDYW
Sbjct: 644 RICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 204/413 (49%), Gaps = 36/413 (8%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y V A ++FD++ +R V N M+ +YV+NG ++ + M + D +TF
Sbjct: 84 YASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTF 143
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
PCV+KAC+ + G KIHG K G ST F+ N LV+MY KC +AR + D M
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
+ DVV WNS++ Y+ + + +AL + REM+ V + +A T + L A +++ E +
Sbjct: 204 R-DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--- 259
Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
+YV + M+ + GK K VSWN M+ +++N +
Sbjct: 260 -------------MYVKD----MFFKMGK-------------KSLVSWNVMIGVYMKNAM 289
Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
+A++ + ++ G +PD V + + A G L GK++H Y ++ + +L + N
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349
Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
L+DMYAKC C+ VF M ++D +SWT +I+ Y + A+ LF +Q GL D
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409
Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNI 412
+ + L ACS + + + + K L L +VD+ G+ G +
Sbjct: 410 SIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 462
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 34/281 (12%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MYGKCG + +A + D++S+R V +WN+++ Y N LE M + IS DA T
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
++ A + +T+ + MY K +F +MG
Sbjct: 244 MASLLPAVS-------------------NTTTENV------MYVK--------DMFFKMG 270
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
+K +V WN +I Y + +EA+ L+ M+ G +A + + L AC D+S +LG
Sbjct: 271 KKS-LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
+IH + + + NALI MYA+CG + +A V ++++D VSW +M++ + +
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGK 281
C A+ F +LQ +G PD + V ++A G L G+
Sbjct: 390 RGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 8/222 (3%)
Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL---SDLVILNAIVDVYGKCGNIDYSRNV 418
V ++G VL ++ + + +H II + L S L + ++ Y ++ +R V
Sbjct: 42 VFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGV--KLMRAYASLKDVASARKV 96
Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
F+ I ++V+ MI SYV+NG E +++F M NV D T L A S +
Sbjct: 97 FDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTI 156
Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
G++++G + G + V + LV MY +CG L A V + + +D++ W S++
Sbjct: 157 VIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGY 216
Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
+ R A+++ +ME+ + D T +LL A S++ N
Sbjct: 217 AQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA---N 538
+ ++ II + S+ L+ YA + A KVF+ + +++I+ MI + N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
G +G G + +F M + PDH TF +L ACS SG I G+K
Sbjct: 119 GFYGEG---VKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 259/772 (33%), Positives = 436/772 (56%), Gaps = 15/772 (1%)
Query: 73 DLDCG-AKIHGLVLKCGYDST----DFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVL 127
+ D G +K LVL+ Y T D + + +A A QLFD M K D L
Sbjct: 39 EFDSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMN-KADAFL 97
Query: 128 WNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATV 187
WN +I +++ G +EA+ + M G+ + +T+ +++ S G +IHA +
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 188 KSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQ 247
K G VYV N+LI++Y + G +A V ++ +D VSWNSM++G++ ++
Sbjct: 158 KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLM 217
Query: 248 FFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF-VSDLQIGNTLMDMY 306
F+E+ G KPD+ T++A+ A + + GKE+H +A++ D+ + +++DMY
Sbjct: 218 LFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMY 277
Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV-QLEGLDADVMII 365
+K V+Y R+F M ++ ++W +I YA+N A F+ + + GL DV+
Sbjct: 278 SKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITS 337
Query: 366 GSVLMACSGLKCMSQTKEIHGYIIRKG-LSDLVILNAIVDVYGKCGNIDYSRNVFESIES 424
++L A + L + + IHGY +R+G L +V+ A++D+YG+CG + + +F+ +
Sbjct: 338 INLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE 393
Query: 425 KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA-ASSLSILKKGKE 483
K+V+SW S+I++YV NG ALELF + ++++ DS T+ S L A A SLS L +G+E
Sbjct: 394 KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLS-LSEGRE 452
Query: 484 LNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGR 543
++ +I++ + + +SLV MYA CG L+ A K FN + KD++ W S+I A +HG
Sbjct: 453 IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGF 512
Query: 544 GKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYA 603
G++++ LF +M A P+ TF +LL ACS SG+++EG ++ E M+ +Y +DP EHY
Sbjct: 513 GRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYG 572
Query: 604 CLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPG 663
C++DL+GR + A +F+ M PTA +W +LL A R H + + E A+++ +++
Sbjct: 573 CMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHD 632
Query: 664 NPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSE 723
N G YVL+ N++A + +W+DV ++++ M G+ +T S +E K H F D+SH
Sbjct: 633 NTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVA 692
Query: 724 SDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEG 783
+++IY+ L ++ + E YV + + + HS RLA +G++ + G
Sbjct: 693 TNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETG 752
Query: 784 SLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
+ + N R+C CH F + SRL RE+VV D+ FHHF G CSCG+YW
Sbjct: 753 RRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 289 bits (739), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 304/557 (54%), Gaps = 13/557 (2%)
Query: 10 DAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACA 69
DA QLFD++++ F WN M+ + S G + ++ YSRM G+ D FT+P VIK+ A
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 70 MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWN 129
+ L+ G KIH +V+K G+ S ++ NSL+++Y K A ++F+ M E+ D+V WN
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER-DIVSWN 200
Query: 130 SIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
S+IS Y A G +L LF+EM + G + ++ ++AL AC +G EIH V+S
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 190 G-QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
+ V V +++ MY++ G+++ A + + ++ V+WN M+ + +N A
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320
Query: 249 FREL-QGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYA 307
F+++ + G +PD + ++N + AS +L G+ +H YA+++GF+ + + L+DMY
Sbjct: 321 FQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYG 376
Query: 308 KCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGS 367
+C + +F +M ++ ISW +IIA Y QN + ALELF+ + L D I S
Sbjct: 377 ECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436
Query: 368 VLMACSGLKCMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKD 426
+L A + +S+ +EIH YI++ + S+ +ILN++V +Y CG+++ +R F I KD
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKD 496
Query: 427 VVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNG 486
VVSW S+I +Y +G ++ LF M + V + T S L+A S ++ +G E
Sbjct: 497 VVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFE 556
Query: 487 FIIRK-GFNLEGSVASSLVDMYARCGALDIANKVFNCVQ-TKDLILWTSMINANGLHGR- 543
+ R+ G + ++D+ R G A + + +W S++NA+ H
Sbjct: 557 SMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDI 616
Query: 544 --GKVAIDLFYKMEAES 558
+ A + +KME ++
Sbjct: 617 TIAEFAAEQIFKMEHDN 633
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 213/431 (49%), Gaps = 19/431 (4%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y K G DAE++F+++ +R + +WN+M+ Y++ G+ L + M G D F+
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRM 119
+ AC+ + G +IH ++ ++ D +V S++ MY+K + A ++F+ M
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293
Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREM-QRVGLVTNAYTFVAALQACEDSSFETL 178
++ ++V WN +I Y+ +G+ +A F++M ++ GL + T + L A S
Sbjct: 294 IQR-NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILE 348
Query: 179 GMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
G IH ++ G + + ALI MY CG++ A + ++ K+ +SWNS++ +VQ
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
N A++ F+EL + PD + + A +L G+E+HAY +K + S+ I
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
N+L+ MYA C + + F + +D +SW +II YA + ++ LF + +
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528
Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
+ + S+L ACS G + K +G I G+ ++D+ G+ GN
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYG--IDPGIEH---YGCMLDLIGRTGN 583
Query: 412 IDYSRNVFESI 422
++ E +
Sbjct: 584 FSAAKRFLEEM 594
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 3/237 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MYG+CG + AE +FD+++++ V +WN+++ AYV NG+ LE + + + D+ T
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
++ A A L G +IH ++K Y S I+NSLV MYA C D AR+ F+ +
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
K DVV WNSII AY+ G ++ LF EM + N TF + L AC S G
Sbjct: 494 LK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGW 552
Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTG 235
E + + G + + ++ + R G + A L ++ + W S+L
Sbjct: 553 EYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNA 609
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/571 (39%), Positives = 363/571 (63%), Gaps = 8/571 (1%)
Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
G +L + +H + + G D + L+ MY+ V+Y +VF + + W
Sbjct: 88 GHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWN 147
Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKC----MSQTKEIHGY 387
+ + L L+ + G+++D VL AC +C + + KEIH +
Sbjct: 148 ALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAH 207
Query: 388 IIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
+ R+G S V I+ +VD+Y + G +DY+ VF + ++VVSW++MI+ Y NG A EA
Sbjct: 208 LTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEA 267
Query: 447 LELFYLMNEANVES--DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLV 504
L F M +S +S+T+VS L A +SL+ L++GK ++G+I+R+G + V S+LV
Sbjct: 268 LRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALV 327
Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
MY RCG L++ +VF+ + +D++ W S+I++ G+HG GK AI +F +M A +P +
Sbjct: 328 TMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPV 387
Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
TF+++L ACSH GL+ EGK+ E M D+ + P EHYAC+VDLLGRAN L+EA + V+
Sbjct: 388 TFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQD 447
Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
M+ EP +VW +LLG+CR+H N EL E +++L L+P N GNYVL+++++A ++ W +V
Sbjct: 448 MRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEV 507
Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
++V+ + GL+K PG W+E+ K++SF++ D+ + ++I+ L ++ E + +E GY
Sbjct: 508 KRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDM-KEKGY 566
Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
+ QT+ VL+ +E EEK +++ GHSE+LA+A+G++ +++G IRITKNLR+C DCH F K
Sbjct: 567 IPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKF 626
Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
+S+ +E++VRD NRFH F+ GVCSCGDYW
Sbjct: 627 ISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 226/472 (47%), Gaps = 20/472 (4%)
Query: 31 GAYVSNGEPLRVL----ETYSRMRVLG--ISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
GA +SN + ++ L + +RVL S T+ +I C L ++H +
Sbjct: 44 GAKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHI 103
Query: 85 LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
L G D F+ L+ MY+ AR++FD+ K + +WN++ A + +G E
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT-RKRTIYVWNALFRALTLAGHGEEV 162
Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFET----LGMEIHAATVKSGQNLQVYVANA 200
LGL+ +M R+G+ ++ +T+ L+AC S G EIHA + G + VY+
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFREL--QGAGQK 258
L+ MYAR G + A+ V + ++ VSW++M+ + +N +A++ FRE+ +
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 259 PDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRV 318
P+ V V+ + A L L GK +H Y +++G S L + + L+ MY +C + RV
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 319 FYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCM 378
F +M +D +SW ++I+ Y + KA+++F + G + SVL ACS +
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402
Query: 379 SQTKEIHGYIIR-KGLSDLVILNA-IVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMIS 435
+ K + + R G+ + A +VD+ G+ +D + + + + ++ W S++
Sbjct: 403 EEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462
Query: 436 SYVHNG---LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKEL 484
S +G LA A + + N + + L + A +K+ K+L
Sbjct: 463 SCRIHGNVELAERASRRLFALEPKNA-GNYVLLADIYAEAQMWDEVKRVKKL 513
Score = 162 bits (411), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 155/291 (53%), Gaps = 11/291 (3%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY GSV A ++FDK +RT++ WNA+ A G VL Y +M +G+ D FT
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180
Query: 61 FPCVIKACA----MLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK--CYDFRKARQ 114
+ V+KAC + L G +IH + + GY S +I+ +LV MYA+ C D+ A
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDY--ASY 238
Query: 115 LFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQR--VGLVTNAYTFVAALQACED 172
+F M + +VV W+++I+ Y+ +G+ EAL FREM R N+ T V+ LQAC
Sbjct: 239 VFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACAS 297
Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
+ G IH ++ G + + V +AL+ MY RCGK+ V ++ ++D VSWNS+
Sbjct: 298 LAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSL 357
Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
++ + + KA+Q F E+ G P V V+ + A G + GK L
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/601 (37%), Positives = 367/601 (61%), Gaps = 5/601 (0%)
Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
F NDL + +L+G+ D+ + L+ G+ +HA+ ++ F D
Sbjct: 37 FPSNDLLLRTSS--NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHD 94
Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
+ +GNTL++MYAKC + +VF +M +DF++WTT+I+GY+Q++ AL F +
Sbjct: 95 IVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDY 414
G + + SV+ A + + ++HG+ ++ G S++ + +A++D+Y + G +D
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
++ VF+++ES++ VSW ++I+ + +ALELF M + S A SS
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274
Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
L++GK ++ ++I+ G L ++L+DMYA+ G++ A K+F+ + +D++ W S+
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334
Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
+ A HG GK A+ F +M P+ I+FL++L ACSHSGL++EG + E+M+ D
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-G 393
Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
+ P HY +VDLLGRA L A +F+ M IEPTA +W ALL ACR+H N ELG A
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453
Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
+ + ELDP +PG +V++ N++A+ +W D +VR +M+ SG+KK P SW+EI N IH F
Sbjct: 454 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 513
Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
+A D+ H + +EI +K E+ K+ +E GYV T V+ +V+++E+ L HSE++A+A
Sbjct: 514 VANDERHPQREEIARKWEEVLAKI-KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 572
Query: 775 YGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDY 834
+ +L + GS I I KN+RVC DCH+ KL S++ GRE++VRD NRFHHF+ G CSC DY
Sbjct: 573 FALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDY 632
Query: 835 W 835
W
Sbjct: 633 W 633
Score = 183 bits (465), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 190/376 (50%), Gaps = 3/376 (0%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KCGS+ +A ++F+K+ QR TW ++ Y + P L +++M G S + FT
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
VIKA A + CG ++HG +KCG+DS + ++L+ +Y + A+ +FD +
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
+ DV WN++I+ ++ +AL LF+ M R G + +++ + AC + F G
Sbjct: 224 SRNDVS-WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK 282
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
+HA +KSG+ L + N L+ MYA+ G + +A + +L +D VSWNS+LT + Q+
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 342
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
+A+ +F E++ G +P+++ ++ ++A G L G + K G V +
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV 402
Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFIS-WTTII-AGYAQNNCHLKALELFRTVQLEGL 358
T++D+ + +N R +M + + W ++ A N L A +L+
Sbjct: 403 TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPD 462
Query: 359 DADVMIIGSVLMACSG 374
D +I + A G
Sbjct: 463 DPGPHVILYNIYASGG 478
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 197/385 (51%), Gaps = 3/385 (0%)
Query: 54 ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKAR 113
I D + ++K C + K L G +H +L+ + + N+L+ MYAKC +AR
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDS 173
++F++M ++ D V W ++IS YS + +AL F +M R G N +T + ++A
Sbjct: 116 KVFEKMPQR-DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 174 SFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSML 233
G ++H VK G + V+V +AL+ +Y R G M +A V LE+++ VSWN+++
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
G + KA++ F+ + G +P + A G L GK +HAY IK G
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
GNTL+DMYAK ++ ++F ++ +D +SW +++ YAQ+ +A+ F +
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNI 412
+ G+ + + SVL ACS + + + + + G+ + +VD+ G+ G++
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 413 DYSRNVFESIESKDVVS-WTSMISS 436
+ + E + + + W +++++
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNA 439
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720
OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/846 (31%), Positives = 440/846 (52%), Gaps = 86/846 (10%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KCG + DA ++FD + +R +FTW+AM+GAY V + + M G+ D F
Sbjct: 124 MYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFL 183
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
FP +++ CA D++ G IH +V+K G S + NS++A+YAKC + A + F RM
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR 243
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
E+ DV+ WNS++ AY +G+ EA+ L +EM++ G+ T+
Sbjct: 244 ER-DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW----------------- 285
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLE----NKDSVSWNSMLTGF 236
N LI Y + GK A ++ ++E D +W +M++G
Sbjct: 286 ------------------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
+ N + +A+ FR++ AG P+ V ++AVSA L + G E+H+ A+K GF+ D+
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV 387
Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
+GN+L+DMY+KC + +VF + +D +W ++I GY Q KA ELF +Q
Sbjct: 388 LVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ-- 445
Query: 357 GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSR 416
DA++ +++ N ++ Y K G+ +
Sbjct: 446 --DANLR------------------------------PNIITWNTMISGYIKNGDEGEAM 473
Query: 417 NVFESIE-----SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSA 471
++F+ +E ++ +W +I+ Y+ NG +EALELF M + +S+T++S L A
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Query: 472 ASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILW 531
++L K +E++G ++R+ + +V ++L D YA+ G ++ + +F ++TKD+I W
Sbjct: 534 CANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITW 593
Query: 532 TSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
S+I LHG A+ LF +M+ + P+ T +++ A G ++EGKK +
Sbjct: 594 NSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAN 653
Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
DY + P EH + +V L GRAN LEEA QF++ M I+ +W + L CR+H + ++
Sbjct: 654 DYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAI 713
Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
A+ L L+P N ++S ++A K + R + LKK G SWIE+ N I
Sbjct: 714 HAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLI 773
Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
H+F D+S +D +Y + +++ R Y + +EEE + + HSE+
Sbjct: 774 HTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELW-----IEEEGREETCGIHSEKF 828
Query: 772 AIAYGVLKSTEGS--LIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVC 829
A+A+G++ S+ S IRI KNLR+C DCH K VS+ +G ++++ D HHF+ G C
Sbjct: 829 AMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDC 888
Query: 830 SCGDYW 835
SC DYW
Sbjct: 889 SCKDYW 894
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/530 (26%), Positives = 256/530 (48%), Gaps = 46/530 (8%)
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
+KE ++ + +G LEA + + G T++ L++C DS LG
Sbjct: 42 KKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGR 101
Query: 181 EIHAATVKSG--QNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
+HA + G V+V L++MYA+CG + +A V + ++ +W++M+ + +
Sbjct: 102 ILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSR 158
Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
+ + + + FR + G PD + G++ GK +H+ IK G S L++
Sbjct: 159 ENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRV 218
Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
N+++ +YAKC +++ + F +M +D I+W +++ Y QN H +A+EL + ++ EG+
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNV 418
LV N ++ Y + G D + ++
Sbjct: 279 SP----------------------------------GLVTWNILIGGYNQLGKCDAAMDL 304
Query: 419 FESIE----SKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
+ +E + DV +WT+MIS +HNG+ +AL++F M A V +++T++SA+SA S
Sbjct: 305 MQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSC 364
Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
L ++ +G E++ ++ GF + V +SLVDMY++CG L+ A KVF+ V+ KD+ W SM
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSM 424
Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
I G A +LF +M+ + P+ IT+ ++ +G E + M D +
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK 484
Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIE---PTAEVWCALLGAC 641
+ + ++ + +EA + R MQ P + +LL AC
Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/732 (32%), Positives = 409/732 (55%), Gaps = 10/732 (1%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y + G + DA LF ++S V WN M+ + G +E + MR + T
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
V+ A ++ +LD G +H +K G S ++ +SLV+MY+KC A ++F+ + E
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
K DV WN++I Y+ +G+ + + LF +M+ G + +TF + L C S +G +
Sbjct: 391 KNDV-FWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ 449
Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
H+ +K ++V NAL+ MYA+CG + +A + ++ ++D+V+WN+++ +VQ++
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509
Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
+A F+ + G D C + + A + L GK++H ++K G DL G++
Sbjct: 510 ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569
Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
L+DMY+KC + +VF + +S +IAGY+QNN +A+ LF+ + G++
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPS 628
Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSD----LVILNAIVDVYGKCGNIDYSRN 417
+ +++ AC + ++ + HG I ++G S L I +++ +Y + +
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI--SLLGMYMNSRGMTEACA 686
Query: 418 VFESIES-KDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLS 476
+F + S K +V WT M+S + NG EAL+ + M V D T V+ L S LS
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746
Query: 477 ILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
L++G+ ++ I +L+ +++L+DMYA+CG + +++VF+ ++ + +++ W S+I
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Query: 536 NANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQL 595
N +G + A+ +F M PD ITFL +L ACSH+G +++G+K E+M Y +
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI 866
Query: 596 DPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAK 655
+ +H AC+VDLLGR +L+EA F+ + ++P A +W +LLGACR+H + GEI A+
Sbjct: 867 EARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAE 926
Query: 656 KLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFI 715
KL+EL+P N YVL+SN++A+ W+ +R MR G+KK PG SWI++ + H F
Sbjct: 927 KLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFA 986
Query: 716 ARDKSHSESDEI 727
A DKSHSE +I
Sbjct: 987 AGDKSHSEIGKI 998
Score = 265 bits (678), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 170/586 (29%), Positives = 294/586 (50%), Gaps = 39/586 (6%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y KC V AE+ FD + ++ V WN+ML Y S G+P +VL ++ + I + FT
Sbjct: 104 LYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFT 162
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
F V+ CA +++ G +IH ++K G + + +LV MYAKC AR++F+ +
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
+ + V W + S Y +G EA+ +F M+ G + FV
Sbjct: 223 DP-NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVT--------------- 266
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
+I Y R GK+ +A + ++ + D V+WN M++G +
Sbjct: 267 --------------------VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
A+++F ++ + K + + +SA G + NL G +HA AIK G S++ +G+
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
+L+ MY+KC + +VF + ++ + W +I GYA N K +ELF ++ G +
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
D S+L C+ + + H II+K L+ +L + NA+VD+Y KCG ++ +R +F
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486
Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
E + +D V+W ++I SYV + +EA +LF MN + SD L S L A + + L
Sbjct: 487 ERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLY 546
Query: 480 KGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANG 539
+GK+++ ++ G + + SSL+DMY++CG + A KVF+ + ++ ++I A
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI-AGY 605
Query: 540 LHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKF 585
+ A+ LF +M P ITF ++ AC + G +F
Sbjct: 606 SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651
Score = 229 bits (585), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 147/553 (26%), Positives = 265/553 (47%), Gaps = 39/553 (7%)
Query: 74 LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
L G +H L G DS + N++V +YAKC A + FD + ++DV WNS++S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL--EKDVTAWNSMLS 133
Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
YS+ G+ + L F + + N +TF L C + G +IH + +K G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 194 QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQ 253
Y AL+ MYA+C ++++A V + + ++V W + +G+V+ L +A+ F ++
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 254 GAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVN 313
G +PD + V ++ RLG L + + L
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLL------------------------------ 283
Query: 314 YMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
F +M++ D ++W +I+G+ + C A+E F ++ + + +GSVL A
Sbjct: 284 -----FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 374 GLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTS 432
+ + +H I+ GL S++ + +++V +Y KC ++ + VFE++E K+ V W +
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNA 398
Query: 433 MISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKG 492
MI Y HNG +++ +ELF M + D T S LS ++ L+ G + + II+K
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458
Query: 493 FNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFY 552
V ++LVDMYA+CGAL+ A ++F + +D + W ++I + A DLF
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 553 KMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRA 612
+M D + L AC+H + +GK+ + + LD + L+D+ +
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 613 NHLEEAYQFVRSM 625
+++A + S+
Sbjct: 578 GIIKDARKVFSSL 590
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 213/463 (46%), Gaps = 37/463 (7%)
Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFV 237
+G +H+ ++ G + + + NA++ +YA+C +++ A LE KD +WNSML+ +
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYS 136
Query: 238 QNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQ 297
K ++ F L P++ +S R N+ G+++H IK G +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 298 IGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG 357
G L+DMYAKC ++ RVF + + + WT + +GY + +A+ +F ++ EG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRN 417
D + +V ++ Y + G + +R
Sbjct: 257 HRPDHLAFVTV----------------------------------INTYIRLGKLKDARL 282
Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
+F + S DVV+W MIS + G A+E F+ M +++V+S TL S LSA ++
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
L G ++ I+ G V SSLV MY++C ++ A KVF ++ K+ + W +MI
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
+G ++LF M++ + D TF +LL C+ S + G +F I+ +L
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSII-IKKKLAK 461
Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
LVD+ + LE+A Q M + W ++G+
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRT-VFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAF 59
MY KCG + + Q+FD++ +R+ V +WN+++ Y NG L+ + MR I D
Sbjct: 776 MYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEI 835
Query: 60 TFPCVIKACAMLKDLDCGAKIHGLVL-KCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
TF V+ AC+ + G KI +++ + G ++ V +V + + ++A +
Sbjct: 836 TFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEA 895
Query: 119 MGEKEDVVLWNSIISA 134
K D LW+S++ A
Sbjct: 896 QNLKPDARLWSSLLGA 911
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
L+ GK ++ + G + EG + +++VD+YA+C + A K F+ ++ KD+ W SM++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
G+ + F + P+ TF +L C+ + G++ + C
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ----IHCSMIKMG 190
Query: 598 WPEHYAC---LVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
+ C LVD+ + + + +A + V ++P W L
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARR-VFEWIVDPNTVCWTCLF 233
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/786 (32%), Positives = 418/786 (53%), Gaps = 29/786 (3%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y K + A F+ + R V +WN+ML Y+ NGE L+ +E + M GI D TF
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
++K C+ L+D G +IHG+V++ G D+ ++L+ MYAK F ++ ++F + E
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243
Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
K V W++II+ + AL F+EMQ+V + + + L++C S LG +
Sbjct: 244 KNSVS-WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQ 302
Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
+HA +KS V A + MYA+C M +A + EN + S+N+M+TG+ Q +
Sbjct: 303 LHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH 362
Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
KA+ F L +G D++ A + L G +++ AIK D+ + N
Sbjct: 363 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 422
Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
+DMY KC + RVF +M +D +SW IIA + QN + L LF ++ ++ D
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 482
Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV-- 418
GS+L AC+G + EIH I++ G+ S+ + +++D+Y KCG I+ + +
Sbjct: 483 EFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541
Query: 419 --------------FESIESKDV----VSWTSMISSYVHNGLANEALELFYLMNEANVES 460
E + +K + VSW S+IS YV + +A LF M E +
Sbjct: 542 RFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITP 601
Query: 461 DSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVF 520
D T + L ++L+ GK+++ +I+K + + S+LVDMY++CG L + +F
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661
Query: 521 NCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLIN 580
+D + W +MI HG+G+ AI LF +M E+ P+H+TF+++L AC+H GLI+
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 721
Query: 581 EGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGA 640
+G ++ +M+ DY LDP HY+ +VD+LG++ ++ A + +R M E +W LLG
Sbjct: 722 KGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGV 781
Query: 641 CRVHSNK-ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKT 699
C +H N E+ E LL LDP + Y L+SNV+A + W+ V +R MRG LKK
Sbjct: 782 CTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKE 841
Query: 700 PGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEE 759
PG SW+E+ +++H F+ DK+H +EIY++L I +++ + FV VE EE
Sbjct: 842 PGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP----FDDSSFV-RGVEVEE 896
Query: 760 KVQMLY 765
+ Q Y
Sbjct: 897 EDQWCY 902
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/565 (26%), Positives = 287/565 (50%), Gaps = 27/565 (4%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY K +++ ++F + ++ +W+A++ V N L+ + M+ + V
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
+ V+++CA L +L G ++H LK + + + + + MYAKC + + A+ LFD
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN-S 342
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
E + +N++I+ YS +AL LF + GL + + +AC + G+
Sbjct: 343 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
+I+ +KS +L V VANA I MY +C + EA V ++ +D+VSWN+++ QN
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN 300
+ + F + + +PD+ T ++ + G+L G E+H+ +K G S+ +G
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEF-TFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGC 521
Query: 301 TLMDMYAKCCCVNYMGRV---FYQM-----TAQDF------------ISWTTIIAGYAQN 340
+L+DMY+KC + ++ F+Q T ++ +SW +II+GY
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 581
Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVIL 399
A LF + G+ D +VL C+ L K+IH +I+K L SD+ I
Sbjct: 582 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 641
Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
+ +VD+Y KCG++ SR +FE +D V+W +MI Y H+G EA++LF M N++
Sbjct: 642 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 701
Query: 460 SDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIAN 517
+ +T +S L A + + ++ KG E +++++ + L+ + S++VD+ + G + A
Sbjct: 702 PNHVTFISILRACAHMGLIDKGLEY-FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 760
Query: 518 KVFNCVQTK-DLILWTSMINANGLH 541
++ + + D ++W +++ +H
Sbjct: 761 ELIREMPFEADDVIWRTLLGVCTIH 785
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 150/521 (28%), Positives = 261/521 (50%), Gaps = 35/521 (6%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KC ++ DA+ LFD ++NAM+ Y + L + R+ G+ D +
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
V +ACA++K L G +I+GL +K + N+ + MY KC +A ++FD M
Sbjct: 385 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM- 443
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
+ D V WN+II+A+ +G+ E L LF M R + + +TF + L+AC S GM
Sbjct: 444 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL-GYGM 502
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEA-------------AGVLYQLENKDS- 226
EIH++ VKSG V +LI MY++CG + EA +G + +LE +
Sbjct: 503 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNK 562
Query: 227 ------VSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
VSWNS+++G+V + A F + G PD+ + L + G
Sbjct: 563 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLG 622
Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
K++HA IK+ SD+ I +TL+DMY+KC ++ +F + +DF++W +I GYA +
Sbjct: 623 KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 682
Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRK--GL-SDLV 397
+A++LF + LE + + + S+L AC+ + + + E + Y++++ GL L
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQLP 741
Query: 398 ILNAIVDVYGKCGNIDYSRNVFESI--ESKDVVSWTSMISSYVHNG---LANEALELFYL 452
+ +VD+ GK G + + + + E+ DV+ T + +H +A EA
Sbjct: 742 HYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLR 801
Query: 453 MNEANVESDSITLVSALSAASSL--SILKKGKELNGFIIRK 491
++ +S + TL+S + A + + + + + GF ++K
Sbjct: 802 LDPQ--DSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 840
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 216/453 (47%), Gaps = 34/453 (7%)
Query: 158 TNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGV 217
T ++FV + C LG + HA + SG +V N L+ +Y A+ V
Sbjct: 48 TTNFSFV--FKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 218 LYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFR------------ELQGAGQKPDQVCTV 265
++ +D VSWN M+ G+ +++ KA FF L G Q + + ++
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 266 NAVSASGRLGNLLNGK-------------------ELHAYAIKQGFVSDLQIGNTLMDMY 306
GR G +G+ ++H ++ G +D+ + L+DMY
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 307 AKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIG 366
AK RVF + ++ +SW+ IIAG QNN AL+ F+ +Q I
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 367 SVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESK 425
SVL +C+ L + ++H + ++ +D ++ A +D+Y KC N+ ++ +F++ E+
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 426 DVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELN 485
+ S+ +MI+ Y +AL LF+ + + + D I+L A + + L +G ++
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 486 GFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGK 545
G I+ +L+ VA++ +DMY +C AL A +VF+ ++ +D + W ++I A+ +G+G
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGY 465
Query: 546 VAIDLFYKMEAESFAPDHITFLALLYACSHSGL 578
+ LF M PD TF ++L AC+ L
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL 498
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 200/434 (46%), Gaps = 45/434 (10%)
Query: 249 FRELQGAGQKPDQVCTVNAVSAS---------GRLGNLLNGKELHAYAIKQGF------- 292
+R + D + VN+VS + + G L GK+ HA+ I GF
Sbjct: 27 YRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVL 86
Query: 293 ------------------------VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
+ D+ N +++ Y+K + F M +D +
Sbjct: 87 NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
Query: 329 SWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYI 388
SW ++++GY QN LK++E+F + EG++ D +L CS L+ S +IHG +
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206
Query: 389 IRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEAL 447
+R G +D+V +A++D+Y K S VF+ I K+ VSW+++I+ V N L + AL
Sbjct: 207 VRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLAL 266
Query: 448 ELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMY 507
+ F M + N S L + ++LS L+ G +L+ ++ F +G V ++ +DMY
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 508 ARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFL 567
A+C + A +F+ + + + +MI G A+ LF+++ + D I+
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 386
Query: 568 ALLYACSHSGLINEGKKFLEI-MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQ 626
+ AC+ ++EG + + ++ LD + A +D+ G+ L EA++ M+
Sbjct: 387 GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDEMR 444
Query: 627 IEPTAEVWCALLGA 640
A W A++ A
Sbjct: 445 -RRDAVSWNAIIAA 457
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/563 (38%), Positives = 356/563 (63%), Gaps = 9/563 (1%)
Query: 281 KELHAYAIKQGF-VSDLQIGNTL---MDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTIIA 335
+++HA++I+ G +SD ++G L + ++Y +VF ++ + W T+I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 336 GYAQNNCHLKALELFRTVQLEGL-DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS 394
GYA+ + A L+R +++ GL + D ++ A + + + + IH +IR G
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 395 DLV-ILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLM 453
L+ + N+++ +Y CG++ + VF+ + KD+V+W S+I+ + NG EAL L+ M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 454 NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGAL 513
N ++ D T+VS LSA + + L GK ++ ++I+ G ++ L+D+YARCG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEA-ESFAPDHITFLALLYA 572
+ A +F+ + K+ + WTS+I ++G GK AI+LF ME+ E P ITF+ +LYA
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 573 CSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAE 632
CSH G++ EG ++ MR +Y+++P EH+ C+VDLL RA +++AY++++SM ++P
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 633 VWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMR 692
+W LLGAC VH + +L E ++L+L+P + G+YVL+SN++A+ ++W DV+++R +M
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 693 GSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVL 752
G+KK PG S +E+GN++H F+ DKSH +SD IY KL E+T +L E GYV Q V
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSE-GYVPQISNVY 512
Query: 753 HNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRE 812
+VEEEEK + HSE++AIA+ ++ + E S I + KNLRVC DCH KLVS+++ RE
Sbjct: 513 VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNRE 572
Query: 813 LVVRDANRFHHFEAGVCSCGDYW 835
+VVRD +RFHHF+ G CSC DYW
Sbjct: 573 IVVRDRSRFHHFKNGSCSCQDYW 595
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 184/353 (52%), Gaps = 9/353 (2%)
Query: 11 AEQLFDKVSQR-TVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAFTFPCVIKAC 68
A ++F K+ + VF WN ++ Y G + Y MRV G + D T+P +IKA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 69 AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLW 128
+ D+ G IH +V++ G+ S ++ NSL+ +YA C D A ++FD+M EK D+V W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK-DLVAW 190
Query: 129 NSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVK 188
NS+I+ ++ +G+ EAL L+ EM G+ + +T V+ L AC TLG +H +K
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 189 SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQF 248
G ++ +N L+ +YARCG++ EA + ++ +K+SVSW S++ G N +A++
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 249 FRELQGA-GQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGN--TLMDM 305
F+ ++ G P ++ V + A G + G E + +++ + + +I + ++D+
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDL 369
Query: 306 YAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELFRTVQLE 356
A+ V M Q + + W T++ A + L + +QLE
Sbjct: 370 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLE 422
Score = 172 bits (437), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 212/423 (50%), Gaps = 31/423 (7%)
Query: 79 KIHGLVLKCGYDSTD--------FIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNS 130
+IH ++ G +D F + SL + Y A ++F ++ + +V +WN+
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSY----AHKVFSKIEKPINVFIWNT 90
Query: 131 IISAYSASGQCLEALGLFREMQRVGLV-TNAYTFVAALQACEDSSFETLGMEIHAATVKS 189
+I Y+ G + A L+REM+ GLV + +T+ ++A + LG IH+ ++S
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 190 GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFF 249
G +YV N+L+ +YA CG + A V ++ KD V+WNS++ GF +N +A+ +
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 250 RELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKC 309
E+ G KPD V+ +SA ++G L GK +H Y IK G +L N L+D+YA+C
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 310 CCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQ-LEG-LDADVMIIGS 367
V +F +M ++ +SWT++I G A N +A+ELF+ ++ EG L ++ +G
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG- 329
Query: 368 VLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFE 420
+L ACS G + + +E Y I + +VD+ + G + + +
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMRE--EYKIEPRIEH---FGCMVDLLARAGQVKKAYEYIK 384
Query: 421 SIE-SKDVVSWTSMISSYVHNGLAN--EALELFYLMNEANVESDSITLVSALSAASSLSI 477
S+ +VV W +++ + +G ++ E + L E N D + L + ++ S
Sbjct: 385 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 444
Query: 478 LKK 480
++K
Sbjct: 445 VQK 447
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 119/237 (50%), Gaps = 6/237 (2%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y CG V A ++FDK+ ++ + WN+++ + NG+P L Y+ M GI D FT
Sbjct: 165 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
++ ACA + L G ++H ++K G N L+ +YA+C +A+ LFD M
Sbjct: 225 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRV-GLVTNAYTFVAALQACEDSSFETLG 179
+K V W S+I + +G EA+ LF+ M+ GL+ TFV L AC G
Sbjct: 285 DKNSVS-WTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 343
Query: 180 MEIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
E + ++ ++ + + ++ + AR G++ +A + + + +V W ++L
Sbjct: 344 FE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 9/277 (3%)
Query: 369 LMACSGLKCMSQTKEIHGYIIRKG--LSDLVILNAIVDV---YGKCGNIDYSRNVFESIE 423
L+ G+ +++ ++IH + IR G +SD + ++ + Y+ VF IE
Sbjct: 21 LLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIE 80
Query: 424 SK-DVVSWTSMISSYVHNGLANEALELFYLMNEAN-VESDSITLVSALSAASSLSILKKG 481
+V W ++I Y G + A L+ M + VE D+ T + A ++++ ++ G
Sbjct: 81 KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140
Query: 482 KELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLH 541
+ ++ +IR GF V +SL+ +YA CG + A KVF+ + KDL+ W S+IN +
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 542 GRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEH 601
G+ + A+ L+ +M ++ PD T ++LL AC+ G + GK+ + + L
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR-VHVYMIKVGLTRNLHS 259
Query: 602 YACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
L+DL R +EEA M ++ + W +L+
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMR-VLGISVDAF 59
+Y +CG V +A+ LFD++ + +W +++ NG +E + M G+
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 60 TFPCVIKACAMLKDLDCGAKIHGL----VLKCGYDSTDFI--VNSLVAMYAKCYDFRKAR 113
TF ++ AC+ CG G ++ Y I +V + A+ +KA
Sbjct: 326 TFVGILYACS-----HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 380
Query: 114 QLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA---YTFVAALQAC 170
+ M + +VV+W +++ A + G L F +Q + L N Y ++ + A
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGD--SDLAEFARIQILQLEPNHSGDYVLLSNMYAS 438
Query: 171 E 171
E
Sbjct: 439 E 439
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/782 (32%), Positives = 428/782 (54%), Gaps = 8/782 (1%)
Query: 56 VDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQL 115
+D+ + +++ C D IH +LK G F N L+ Y K + A L
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 116 FDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSF 175
FD M E+ +V + ++ Y+ C + +GL+ + R G N + F + L+
Sbjct: 107 FDEMPERNNVS-FVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 176 ETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTG 235
+ +H+ VK G + +V ALI Y+ CG + A V + KD V W +++
Sbjct: 162 AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 236 FVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSD 295
+V+N + +++ ++ AG P+ A+ AS LG K +H +K +V D
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLD 281
Query: 296 LQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQL 355
++G L+ +Y + ++ +VF +M D + W+ +IA + QN +A++LF ++
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
Query: 356 EGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDY 414
+ + + S+L C+ KC +++HG +++ G D+ + NA++DVY KC +D
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 415 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 474
+ +F + SK+ VSW ++I Y + G +A +F V +T SAL A +S
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 475 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSM 534
L+ + G +++G I+ + +V++SL+DMYA+CG + A VFN ++T D+ W ++
Sbjct: 462 LASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNAL 521
Query: 535 INANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQ 594
I+ HG G+ A+ + M+ P+ +TFL +L CS++GLI++G++ E M D+
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581
Query: 595 LDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVA 654
++P EHY C+V LLGR+ L++A + + + EP+ +W A+L A +N+E A
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSA 641
Query: 655 KKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
+++L+++P + YVL+SN++A +++W +V +R M+ G+KK PG SWIE +H F
Sbjct: 642 EEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYF 701
Query: 715 IARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIA 774
H + I L + K R GYV VL ++++EEK + L+ HSERLA+A
Sbjct: 702 SVGLSDHPDMKLINGMLEWLNMKATR-AGYVPDRNAVLLDMDDEEKDKRLWVHSERLALA 760
Query: 775 YGVLK-STEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGD 833
YG+++ + + I I KNLR+C DCHS K++S + R+LV+RD NRFHHF AGVCSCGD
Sbjct: 761 YGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGD 820
Query: 834 YW 835
+W
Sbjct: 821 HW 822
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 215/438 (49%), Gaps = 4/438 (0%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y CGSV A +F+ + + + W ++ YV NG L+ S MR+ G + +TF
Sbjct: 191 YSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF 250
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
+KA L D +HG +LK Y + L+ +Y + D A ++F+ M
Sbjct: 251 DTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM-P 309
Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
K DVV W+ +I+ + +G C EA+ LF M+ +V N +T + L C LG +
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
+H VK G +L +YV+NALI +YA+C KM A + +L +K+ VSWN+++ G+
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429
Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
KA FRE +V +A+ A L ++ G ++H AIK + + N+
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489
Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDAD 361
L+DMYAKC + + VF +M D SW +I+GY+ + +AL + ++ +
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPN 549
Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRK-GLSD-LVILNAIVDVYGKCGNIDYSRNVF 419
+ VL CS + Q +E +IR G+ L +V + G+ G +D + +
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI 609
Query: 420 ESIE-SKDVVSWTSMISS 436
E I V+ W +M+S+
Sbjct: 610 EGIPYEPSVMIWRAMLSA 627
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 152/282 (53%), Gaps = 1/282 (0%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y + G + DA ++F+++ + V W+ M+ + NG ++ + RMR + + FT
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
++ CA+ K G ++HGLV+K G+D ++ N+L+ +YAKC A +LF +
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
K +V WN++I Y G+ +A +FRE R + TF +AL AC + LG+
Sbjct: 411 SKNEVS-WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV 469
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
++H +K+ +V V+N+LI MYA+CG + A V ++E D SWN++++G+ +
Sbjct: 470 QVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHG 529
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKE 282
L +A++ ++ KP+ + + +S G + G+E
Sbjct: 530 LGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQE 571
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/630 (38%), Positives = 375/630 (59%), Gaps = 10/630 (1%)
Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
ARQ+F M K + WN+++ + S Q E L F M R + +T AL+AC
Sbjct: 13 ARQMFGEM-TKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 172 DSSFETLGMEIHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS 228
+ G IH K G +L YV ++LI MY +CG+M EA + +LE D V+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDL--YVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 229 WNSMLTGFVQNDLYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYA 287
W+SM++GF +N +A++FFR + A PD+V + VSA +L N G+ +H +
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 288 IKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKAL 347
I++GF +DL + N+L++ YAK +F + +D ISW+T+IA Y QN +AL
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 348 ELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVY 406
+F + +G + +V + VL AC+ + Q ++ H IRKGL +++ + A+VD+Y
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 407 GKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMN-EANVESDSITL 465
KC + + + VF I KDVVSW ++IS + NG+A+ ++E F +M E N D+I +
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 466 VSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQT 525
V L + S L L++ K + ++I+ GF+ + +SLV++Y+RCG+L A+KVFN +
Sbjct: 370 VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL 429
Query: 526 KDLILWTSMINANGLHGRGKVAIDLFYKM-EAESFAPDHITFLALLYACSHSGLINEGKK 584
KD ++WTS+I G+HG+G A++ F M ++ P+ +TFL++L ACSH+GLI+EG +
Sbjct: 430 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLR 489
Query: 585 FLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVH 644
++M DY+L P EHYA LVDLLGR L+ A + + M PT ++ LLGACR+H
Sbjct: 490 IFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIH 549
Query: 645 SNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSW 704
N E+ E VAKKL EL+ + G Y+L+SNV+ +W++VE++R ++ G+KK S
Sbjct: 550 QNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESL 609
Query: 705 IEIGNKIHSFIARDKSHSESDEIYKKLAEI 734
IEI K+H F+A D+ H E + +Y L E+
Sbjct: 610 IEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Score = 259 bits (663), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 277/524 (52%), Gaps = 11/524 (2%)
Query: 4 KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
K S +DA Q+F ++++R+++ WN +L + + VL +S M D FT P
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 64 VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIV-NSLVAMYAKCYDFRKARQLFDRMGEK 122
+KAC L++++ G IHG V K +D V +SL+ MY KC +A ++FD + EK
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL-EK 124
Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT-NAYTFVAALQACEDSSFETLGME 181
D+V W+S++S + +G +A+ FR M VT + T + + AC S LG
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 182 IHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
+H ++ G + + + N+L+ YA+ EA + + KD +SW++++ +VQN
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNT 301
+A+ F ++ G +P+ + + A +L G++ H AI++G +++++
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 302 LMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE-GLDA 360
L+DMY KC VF ++ +D +SW +I+G+ N +++E F + LE
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVF 419
D +++ VL +CS L + Q K H Y+I+ G S+ I ++V++Y +CG++ + VF
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELF-YLMNEANVESDSITLVSALSAASSLSIL 478
I KD V WTS+I+ Y +G +ALE F +++ + V+ + +T +S LSA S ++
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Query: 479 KKGKELNGFII---RKGFNLEGSVASSLVDMYARCGALDIANKV 519
+G + ++ R NLE LVD+ R G LD A ++
Sbjct: 485 HEGLRIFKLMVNDYRLAPNLEHYAV--LVDLLGRVGDLDTAIEI 526
Score = 216 bits (550), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 222/418 (53%), Gaps = 6/418 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
MY KCG +++A ++FD++ + + TW++M+ + NG P + +E + RM + ++ D
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 60 TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
T ++ AC L + G +HG V++ G+ + +VNSL+ YAK F++A LF +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
EK DV+ W+++I+ Y +G EAL +F +M G N T + LQAC + G
Sbjct: 225 AEK-DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG 283
Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
+ H ++ G +V V+ AL+ MY +C EA V ++ KD VSW ++++GF N
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 343
Query: 240 DLYCKAMQFFR-ELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
+ ++++ F L +PD + V + + LG L K H+Y IK GF S+ I
Sbjct: 344 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 403
Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF-RTVQLEG 357
G +L+++Y++C + +VF + +D + WT++I GY + KALE F V+
Sbjct: 404 GASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE 463
Query: 358 LDADVMIIGSVLMACSGLKCMSQTKEIHGYIIR--KGLSDLVILNAIVDVYGKCGNID 413
+ + + S+L ACS + + I ++ + +L +VD+ G+ G++D
Sbjct: 464 VKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 521
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/664 (35%), Positives = 382/664 (57%), Gaps = 9/664 (1%)
Query: 178 LGMEIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGF 236
LG +HA VK+ ++AN LI MY++ A VL ++ VSW S+++G
Sbjct: 24 LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83
Query: 237 VQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDL 296
QN + A+ F E++ G P+ A A L + GK++HA A+K G + D+
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 297 QIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE 356
+G + DMY K + ++F ++ ++ +W I+ + +A+E F ++
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF--IEFR 201
Query: 357 GLD--ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNID 413
+D + + + L ACS ++ ++HG ++R G +D+ + N ++D YGKC I
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 414 YSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAAS 473
S +F + +K+ VSW S++++YV N +A L+ + VE+ + S LSA +
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 474 SLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTS 533
++ L+ G+ ++ ++ V S+LVDMY +CG ++ + + F+ + K+L+ S
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381
Query: 534 MINANGLHGRGKVAIDLFYKMEAES--FAPDHITFLALLYACSHSGLINEGKKFLEIMRC 591
+I G+ +A+ LF +M P+++TF++LL ACS +G + G K + MR
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441
Query: 592 DYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGE 651
Y ++P EHY+C+VD+LGRA +E AY+F++ M I+PT VW AL ACR+H +LG
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
Query: 652 IVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKI 711
+ A+ L +LDP + GN+VL+SN FAA+ +W + VR ++G G+KK G SWI + N++
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQV 561
Query: 712 HSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERL 771
H+F A+D+SH + EI LA++ ++E GY + L+++EEEEK + HSE+L
Sbjct: 562 HAFQAKDRSHILNKEIQTTLAKLRNEME-AAGYKPDLKLSLYDLEEEEKAAEVSHHSEKL 620
Query: 772 AIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSC 831
A+A+G+L IRITKNLR+C DCHSF K VS RE++VRD NRFH F+ G+CSC
Sbjct: 621 ALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSC 680
Query: 832 GDYW 835
DYW
Sbjct: 681 KDYW 684
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 256/514 (49%), Gaps = 14/514 (2%)
Query: 54 ISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKC-GYDSTDFIVNSLVAMYAKCYDFRKA 112
+S DA ++K + G +H ++K F+ N L+ MY+K D ++
Sbjct: 4 LSADALGL--LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSK-LDHPES 60
Query: 113 RQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACED 172
+L R+ +VV W S+IS + +G AL F EM+R G+V N +TF A +A
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 120
Query: 173 SSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSM 232
G +IHA VK G+ L V+V + MY + +A + ++ ++ +WN+
Sbjct: 121 LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAF 180
Query: 233 LTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGF 292
++ V + +A++ F E + P+ + ++A +L G +LH ++ GF
Sbjct: 181 ISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF 240
Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRT 352
+D+ + N L+D Y KC + +F +M ++ +SW +++A Y QN+ KA L+
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 300
Query: 353 VQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIVDVYGKCGN 411
+ + ++ +I SVL AC+G+ + + IH + ++ + + + +A+VD+YGKCG
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360
Query: 412 IDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNE--ANVESDSITLVSAL 469
I+ S F+ + K++V+ S+I Y H G + AL LF M + +T VS L
Sbjct: 361 IEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLL 420
Query: 470 SAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTKD 527
SA S ++ G ++ +R + +E S +VDM R G ++ A + + +
Sbjct: 421 SACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQP 479
Query: 528 LI-LWTSMINANGLHGR---GKVAIDLFYKMEAE 557
I +W ++ NA +HG+ G +A + +K++ +
Sbjct: 480 TISVWGALQNACRMHGKPQLGLLAAENLFKLDPK 513
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 237/508 (46%), Gaps = 25/508 (4%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY K A + R V +W +++ NG L + MR G+ + FT
Sbjct: 51 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 110
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
FPC KA A L+ G +IH L +KCG F+ S MY K AR+LFD +
Sbjct: 111 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 170
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
E+ ++ WN+ IS G+ EA+ F E +R+ N+ TF A L AC D LGM
Sbjct: 171 ER-NLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 229
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
++H ++SG + V V N LI Y +C ++ + + ++ K++VSW S++ +VQN
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 289
Query: 241 LYCKA-MQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
KA + + R + + D + + + +SA + L G+ +HA+A+K + +G
Sbjct: 290 EDEKASVLYLRSRKDIVETSDFMIS-SVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLE--G 357
+ L+DMY KC C+ + F +M ++ ++ ++I GYA AL LF + G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 358 LDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCG 410
+ M S+L ACS G+K + +G I G + IVD+ G+ G
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG--IEPGAEH---YSCIVDMLGRAG 463
Query: 411 NIDYSRNVFESIESKDVVS-WTSMISSYVHNGLANEAL----ELFYLMNEANVESDSITL 465
++ + + + + +S W ++ ++ +G L LF L + + + L
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKL--DPKDSGNHVLL 521
Query: 466 VSALSAASSLSILKKGK-ELNGFIIRKG 492
+ +AA + + EL G I+KG
Sbjct: 522 SNTFAAAGRWAEANTVREELKGVGIKKG 549
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/566 (39%), Positives = 346/566 (61%), Gaps = 4/566 (0%)
Query: 272 GRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWT 331
R G ++ K H I+ D+ + N L++ Y+KC V +VF M + +SW
Sbjct: 72 ARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWN 131
Query: 332 TIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS-QTKEIHGYIIR 390
T+I Y +N +AL++F ++ EG I SVL AC G+ C + + K++H ++
Sbjct: 132 TMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC-GVNCDALECKKLHCLSVK 190
Query: 391 KGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALEL 449
+ +L + A++D+Y KCG I + VFES++ K V+W+SM++ YV N EAL L
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 250
Query: 450 FYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR 509
+ ++E + TL S + A S+L+ L +GK+++ I + GF VASS VDMYA+
Sbjct: 251 YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK 310
Query: 510 CGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLAL 569
CG+L + +F+ VQ K+L LW ++I+ H R K + LF KM+ + P+ +TF +L
Sbjct: 311 CGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSL 370
Query: 570 LYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEP 629
L C H+GL+ EG++F ++MR Y L P HY+C+VD+LGRA L EAY+ ++S+ +P
Sbjct: 371 LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDP 430
Query: 630 TAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRM 689
TA +W +LL +CRV+ N EL E+ A+KL EL+P N GN+VL+SN++AA+++W+++ + R
Sbjct: 431 TASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRK 490
Query: 690 RMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQ 749
+R +KK G SWI+I +K+H+F + H EI L + K R+ GY +
Sbjct: 491 LLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKF-RKFGYKPSVE 549
Query: 750 FVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLF 809
LH+VE +K ++L HSE+LA+ +G++ E S +RI KNLR+CVDCH F K S
Sbjct: 550 HELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMAT 609
Query: 810 GRELVVRDANRFHHFEAGVCSCGDYW 835
R ++VRD NRFHHF G CSCGD+W
Sbjct: 610 RRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 203/383 (53%), Gaps = 7/383 (1%)
Query: 81 HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
HG +++ + ++N L+ Y+KC ARQ+FD M E+ +V WN++I Y+ +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER-SLVSWNTMIGLYTRNRM 142
Query: 141 CLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANA 200
EAL +F EM+ G + +T + L AC + ++H +VK+ +L +YV A
Sbjct: 143 ESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTA 202
Query: 201 LIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPD 260
L+ +YA+CG + +A V +++K SV+W+SM+ G+VQN Y +A+ +R Q + +
Sbjct: 203 LLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQN 262
Query: 261 QVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFY 320
Q + + A L L+ GK++HA K GF S++ + ++ +DMYAKC + +F
Sbjct: 263 QFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFS 322
Query: 321 QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQ 380
++ ++ W TII+G+A++ + + LF +Q +G+ + + S+L C + +
Sbjct: 323 EVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEE 382
Query: 381 TKEIHGYI-IRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVS-WTSMISS- 436
+ + GLS ++V + +VD+ G+ G + + + +SI S W S+++S
Sbjct: 383 GRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASC 442
Query: 437 --YVHNGLANEALELFYLMNEAN 457
Y + LA A E + + N
Sbjct: 443 RVYKNLELAEVAAEKLFELEPEN 465
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 153/283 (54%), Gaps = 3/283 (1%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y KCG V A Q+FD + +R++ +WN M+G Y N L+ + MR G FT
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 62 PCVIKACAMLKD-LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
V+ AC + D L+C K+H L +K D ++ +L+ +YAKC + A Q+F+ M
Sbjct: 166 SSVLSACGVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
+K V W+S+++ Y + EAL L+R QR+ L N +T + + AC + + G
Sbjct: 225 DKSSVT-WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 283
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
++HA KSG V+VA++ + MYA+CG + E+ + +++ K+ WN++++GF ++
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 343
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
+ M F ++Q G P++V + +S G G + G+
Sbjct: 344 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 161/326 (49%), Gaps = 5/326 (1%)
Query: 364 IIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESI 422
++ +L C+ + + K HG IIR L D+ +LN +++ Y KCG ++ +R VF+ +
Sbjct: 63 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 423 ESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGK 482
+ +VSW +MI Y N + +EAL++F M + T+ S LSA + K
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK 182
Query: 483 ELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHG 542
+L+ ++ +L V ++L+D+YA+CG + A +VF +Q K + W+SM+ +
Sbjct: 183 KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242
Query: 543 RGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHY 602
+ A+ L+ + + S + T +++ ACS+ + EGK+ ++ C
Sbjct: 243 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI-CKSGFGSNVFVA 301
Query: 603 ACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDP 662
+ VD+ + L E+Y +Q E E+W ++ H+ + I+ +K ++ D
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEVMILFEK-MQQDG 359
Query: 663 GNPGNYVLISNVFAASRKWKDVEQVR 688
+P N V S++ + VE+ R
Sbjct: 360 MHP-NEVTFSSLLSVCGHTGLVEEGR 384
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 3/235 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y KCG + DA Q+F+ + ++ TW++M+ YV N L Y R + + + + FT
Sbjct: 206 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
VI AC+ L L G ++H ++ K G+ S F+ +S V MYAKC R++ +F +
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 325
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
EK ++ LWN+IIS ++ + E + LF +MQ+ G+ N TF + L C + G
Sbjct: 326 EK-NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGR 384
Query: 181 EIHAATVKS-GQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSML 233
+ G + V + ++ + R G ++EA ++ + + S W S+L
Sbjct: 385 RFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/650 (35%), Positives = 365/650 (56%), Gaps = 39/650 (6%)
Query: 224 KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
+S+ +N L ++ + F++ ++ G + DQ + + A ++ L G EL
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 284 HAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCH 343
H A K + D + MDMYA C +NY VF +M+ +D ++W T+I Y +
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII-------------- 389
+A +LF ++ + D MI+ +++ AC M + I+ ++I
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 390 ------------------RKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWT 431
+ + +L + A+V Y KCG +D ++ +F+ E KD+V WT
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWT 313
Query: 432 SMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
+MIS+YV + EAL +F M + ++ D +++ S +SA ++L IL K K ++ I
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN 373
Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
G E S+ ++L++MYA+CG LD VF + ++++ W+SMINA +HG A+ LF
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLF 433
Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGR 611
+M+ E+ P+ +TF+ +LY CSHSGL+ EGKK M +Y + P EHY C+VDL GR
Sbjct: 434 ARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGR 493
Query: 612 ANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLI 671
AN L EA + + SM + +W +L+ ACR+H ELG+ AK++LEL+P + G VL+
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLM 553
Query: 672 SNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKL 731
SN++A ++W+DV +R M + K G S I+ K H F+ DK H +S+EIY KL
Sbjct: 554 SNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKL 613
Query: 732 AEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGS------L 785
E+ KL + GYV VL +VEEEEK ++ HSE+LA+ +G++ + +
Sbjct: 614 DEVVSKL-KLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV 672
Query: 786 IRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
IRI KNLRVC DCH F KLVS+++ RE++VRD RFH ++ G+CSC DYW
Sbjct: 673 IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 249/498 (50%), Gaps = 46/498 (9%)
Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
A +F + + +++N + S S + + ++ ++ VG + ++F+ L+A
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
S GME+H K +V + MYA CG++ A V ++ ++D V+WN+
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
M+ + + L +A + F E++ + PD++ N VSA GR GN+ + ++ + I+
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFY------------------------------- 320
D + L+ MYA C++ M R F+
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMD-MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 321 -QMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMS 379
Q +D + WTT+I+ Y +++ +AL +F + G+ DV+ + SV+ AC+ L +
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 380 QTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYV 438
+ K +H I GL S+L I NA++++Y KCG +D +R+VFE + ++VVSW+SMI++
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 439 HNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGS 498
+G A++AL LF M + NVE + +T V L S ++++GK++ + + +N+
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDE-YNITPK 480
Query: 499 VA--SSLVDMYARCGALDIANKVFNCVQT-KDLILWTSMINANGLHGR---GKVAIDLFY 552
+ +VD++ R L A +V + ++++W S+++A +HG GK A
Sbjct: 481 LEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRIL 540
Query: 553 KMEAESFAPDHITFLALL 570
++E PDH L L+
Sbjct: 541 ELE-----PDHDGALVLM 553
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 208/449 (46%), Gaps = 41/449 (9%)
Query: 25 TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
+N L + EP + Y R+R +G +D F+F ++KA + + L G ++HG+
Sbjct: 78 VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVA 137
Query: 85 LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
K F+ + MYA C AR +FD M + DVV WN++I Y G EA
Sbjct: 138 FKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR-DVVTWNTMIERYCRFGLVDEA 196
Query: 145 LGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAM 204
LF EM+ ++ + + AC + I+ +++ + ++ AL+ M
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 205 YA-------------------------------RCGKMTEAAGVLYQLENKDSVSWNSML 233
YA +CG++ +A + Q E KD V W +M+
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
+ +V++D +A++ F E+ +G KPD V + +SA LG L K +H+ G
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
S+L I N L++MYAKC ++ VF +M ++ +SW+++I + + AL LF +
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
Query: 354 QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHG-----YIIRKGLSDLVILNAIVDVYGK 408
+ E ++ + + VL CS + + K+I Y I L +VD++G+
Sbjct: 437 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH---YGCMVDLFGR 493
Query: 409 CGNIDYSRNVFESIE-SKDVVSWTSMISS 436
+ + V ES+ + +VV W S++S+
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSA 522
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 7/238 (2%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y KCG + DA+ +FD+ ++ + W M+ AYV + P L + M GI D +
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
VI ACA L LD +H + G +S I N+L+ MYAKC R +F++M
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM-P 406
Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
+ +VV W+S+I+A S G+ +AL LF M++ + N TFV L C S G +
Sbjct: 407 RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
Query: 182 IHAATVKS---GQNLQVYVANALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSMLTG 235
I A+ L+ Y ++ ++ R + EA V+ + + V W S+++
Sbjct: 467 IFASMTDEYNITPKLEHY--GCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 153/368 (41%), Gaps = 32/368 (8%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY CG + A +FD++S R V TWN M+ Y G + + M+ + D
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
++ AC ++ I+ +++ ++ +LV MYA AR+ F +M
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 121 ------------------------------EKEDVVLWNSIISAYSASGQCLEALGLFRE 150
EK+D+V W ++ISAY S EAL +F E
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 151 MQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGK 210
M G+ + + + + AC + +H+ +G ++ + NALI MYA+CG
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 211 MTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSA 270
+ V ++ ++ VSW+SM+ + A+ F ++ +P++V V +
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 271 SGRLGNLLNGKELHAYAIKQ-GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT-AQDFI 328
G + GK++ A + L+ ++D++ + + V M A + +
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 329 SWTTIIAG 336
W ++++
Sbjct: 515 IWGSLMSA 522
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/734 (34%), Positives = 406/734 (55%), Gaps = 17/734 (2%)
Query: 11 AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG--ISVDAFTFPCVIKAC 68
A QLFD + + T WN ++ ++ N P L YSRM+ + DA+T+ +KAC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 69 AMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMY------AKCYDFRKARQLFDRMGEK 122
A K+L G +H +++C +S+ + NSL+ MY C+++ R++FD M +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNM-RR 176
Query: 123 EDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEI 182
++VV WN++IS Y +G+ EA F M R+ + + +FV A S
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVF 236
Query: 183 HAATVKSGQNL--QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
+ +K G ++V ++ I+MYA G + + V ++ WN+M+ +VQND
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 241 LYCKAMQFFRELQGAGQ-KPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
++++ F E G+ + D+V + A SA L + G++ H + K + I
Sbjct: 297 CLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIV 356
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
N+LM MY++C V+ VF M +D +SW T+I+ + QN + L L +Q +G
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVF 419
D + + ++L A S L+ K+ H ++IR+G+ + + ++D+Y K G I S+ +F
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLF 476
Query: 420 ES--IESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
E +D +W SMIS Y NG + +F M E N+ +++T+ S L A S +
Sbjct: 477 EGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGS 536
Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
+ GK+L+GF IR+ + VAS+LVDMY++ GA+ A +F+ + ++ + +T+MI
Sbjct: 537 VDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG 596
Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
G HG G+ AI LF M+ PD ITF+A+L ACS+SGLI+EG K E MR Y + P
Sbjct: 597 YGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQP 656
Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPT-AEVWCALLGACRVHSNKELGEIVAKK 656
EHY C+ D+LGR + EAY+FV+ + E AE+W +LLG+C++H EL E V+++
Sbjct: 657 SSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSER 716
Query: 657 LLELDPGN--PGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSF 714
L + D G G VL+SN++A +KWK V++VR MR GLKK G S IEI ++ F
Sbjct: 717 LAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCF 776
Query: 715 IARDKSHSESDEIY 728
++RD+ H S EIY
Sbjct: 777 VSRDQEHPHSSEIY 790
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 210/402 (52%), Gaps = 26/402 (6%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG---ISVD 57
MY + G + + ++FD +R + WN M+G YV N + +E + + +G I D
Sbjct: 260 MYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF--LEAIGSKEIVSD 317
Query: 58 AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
T+ A + L+ ++ G + HG V K + IVNSL+ MY++C K+ +F
Sbjct: 318 EVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFL 377
Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
M E+ DVV WN++ISA+ +G E L L EMQ+ G + T A L A + +
Sbjct: 378 SMRER-DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKE 436
Query: 178 LGMEIHAATVKSGQNLQVYVANA-LIAMYARCG------KMTEAAGVLYQLENKDSVSWN 230
+G + HA ++ G +Q N+ LI MY++ G K+ E +G +D +WN
Sbjct: 437 IGKQTHAFLIRQG--IQFEGMNSYLIDMYSKSGLIRISQKLFEGSG----YAERDQATWN 490
Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQ 290
SM++G+ QN K FR++ +P+ V + + A ++G++ GK+LH ++I+Q
Sbjct: 491 SMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ 550
Query: 291 GFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELF 350
++ + + L+DMY+K + Y +F Q ++ +++TT+I GY Q+ +A+ LF
Sbjct: 551 YLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLF 610
Query: 351 RTVQLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIH 385
++Q G+ D + +VL ACS GLK + +E++
Sbjct: 611 LSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVY 652
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 166/329 (50%), Gaps = 10/329 (3%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY +CGSV + +F + +R V +WN M+ A+V NG L M+ G +D T
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
++ A + L++ + G + H +++ G + + + L+ MY+K R +++LF+ G
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNSYLIDMYSKSGLIRISQKLFEGSG 480
Query: 121 EKE-DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
E D WNS+IS Y+ +G + +FR+M + NA T + L AC LG
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG 540
Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
++H +++ + V+VA+AL+ MY++ G + A + Q + ++SV++ +M+ G+ Q+
Sbjct: 541 KQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQH 600
Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
+ +A+ F +Q +G KPD + V +SA G + G ++ F ++
Sbjct: 601 GMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI--------FEEMREVY 652
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFI 328
N CC + +GRV A +F+
Sbjct: 653 NIQPSSEHYCCITDMLGRVGRVNEAYEFV 681
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 8/188 (4%)
Query: 410 GNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEAN--VESDSITLVS 467
GN +R +F++I V W ++I ++ N L +EAL + M + D+ T S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYAR------CGALDIANKVFN 521
L A + LK GK ++ +IR N V +SL++MY C D+ KVF+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 522 CVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINE 581
++ K+++ W ++I+ GR A F M P ++F+ + A S S I +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 582 GKKFLEIM 589
F +M
Sbjct: 233 ANVFYGLM 240
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/537 (40%), Positives = 344/537 (64%), Gaps = 7/537 (1%)
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLD 359
N L++MY K +N ++F QM ++ ISWTT+I+ Y++ H KALEL + + +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 360 ADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNV 418
+V SVL +C+G MS + +H II++GL SD+ + +A++DV+ K G + + +V
Sbjct: 160 PNVYTYSSVLRSCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 419 FESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSIL 478
F+ + + D + W S+I + N ++ ALELF M A ++ TL S L A + L++L
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 479 KKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINAN 538
+ G + + I++ ++ + + ++LVDMY +CG+L+ A +VFN ++ +D+I W++MI+
Sbjct: 277 ELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL 334
Query: 539 GLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPW 598
+G + A+ LF +M++ P++IT + +L+ACSH+GL+ +G + M+ Y +DP
Sbjct: 335 AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV 394
Query: 599 PEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLL 658
EHY C++DLLG+A L++A + + M+ EP A W LLGACRV N L E AKK++
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVI 454
Query: 659 ELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARD 718
LDP + G Y L+SN++A S+KW VE++R RMR G+KK PG SWIE+ +IH+FI D
Sbjct: 455 ALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGD 514
Query: 719 KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVL 778
SH + E+ KKL ++ +L GYV +T FVL ++E E+ L HSE+LA+A+G++
Sbjct: 515 NSHPQIVEVSKKLNQLIHRLT-GIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 573
Query: 779 KSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
+IRI KNLR+C DCH FCKL S+L R +V+RD R+HHF+ G CSCGDYW
Sbjct: 574 TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 204/404 (50%), Gaps = 19/404 (4%)
Query: 41 RVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLV 100
R ++ ++ G+ D+ T+ +IK C + + G I + G+ F+VN L+
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 101 AMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
MY K A QLFD+M ++ +V+ W ++ISAYS +AL L M R + N
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQR-NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNV 162
Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
YT+ + L++C S + +H +K G V+V +ALI ++A+ G+ +A V +
Sbjct: 163 YTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
+ D++ WNS++ GF QN A++ F+ ++ AG +Q + + A L L G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
+ H + +K + DL + N L+DMY KC + RVF QM +D I+W+T+I+G AQN
Sbjct: 280 MQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN 400
+AL+LF ++ G + + I VL ACS + G+ + + L ++
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED-----GWYYFRSMKKLYGID 392
Query: 401 AI-------VDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMISS 436
+ +D+ GK G +D + + +E D V+W +++ +
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 193/383 (50%), Gaps = 23/383 (6%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY K + DA QLFD++ QR V +W M+ AY + LE M + + +T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
+ V+++C + D+ +H ++K G +S F+ ++L+ ++AK + A +FD M
Sbjct: 165 YSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
D ++WNSII ++ + + AL LF+ M+R G + T + L+AC + LGM
Sbjct: 222 TG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQND 240
+ H VK Q+L + NAL+ MY +CG + +A V Q++ +D ++W++M++G QN
Sbjct: 281 QAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 241 LYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG-------KELHAY-AIKQGF 292
+A++ F ++ +G KP+ + V + A G L +G K+L+ +++ +
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 293 VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQ-DFISWTTII-AGYAQNNCHLKALELF 350
++D+ K ++ ++ +M + D ++W T++ A Q N L
Sbjct: 399 -------GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 451
Query: 351 RTVQLEGLDADVMIIGSVLMACS 373
+ + L+ DA + S + A S
Sbjct: 452 KVIALDPEDAGTYTLLSNIYANS 474
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 166/338 (49%), Gaps = 18/338 (5%)
Query: 345 KALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVIL-NAIV 403
+A++ ++Q GL AD ++ C + + + I ++ G ++ L N ++
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 404 DVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSI 463
++Y K ++ + +F+ + ++V+SWT+MIS+Y + +ALEL LM NV +
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 464 TLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCV 523
T S L + + +S ++ L+ II++G + V S+L+D++A+ G + A VF+ +
Sbjct: 164 TYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 524 QTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG- 582
T D I+W S+I + R VA++LF +M+ F + T ++L AC+ L+ G
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALL-GAC 641
+ + I++ D L LVD+ + LE+A + M+ E W ++ G
Sbjct: 281 QAHVHIVKYDQDLIL----NNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLA 335
Query: 642 RVHSNKELGEIVAKKLLEL--DPGNPGNYVLISNVFAA 677
+ ++E A KL E G NY+ I V A
Sbjct: 336 QNGYSQE-----ALKLFERMKSSGTKPNYITIVGVLFA 368
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/799 (32%), Positives = 418/799 (52%), Gaps = 76/799 (9%)
Query: 77 GAKIHGLVLKCGYDSTDF-IVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAY 135
G IHG ++K G D++D +V++ + Y +C A +LFD M +++D+ WN I+
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLA-WNEIVMVN 64
Query: 136 SASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQV 195
SG +A+ LFREMQ G T V LQ C + G +IH ++ G V
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 196 YVANALIAMYARCGKM-------------------------------TEAAGVLYQLE-- 222
+ N+LI MY+R GK+ +A G+L ++E
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 223 --NKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
D V+WNS+L+G+ L A+ + +Q AG KP + + A G+L G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 281 KELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQN 340
K +H Y ++ D+ + TL+DMY K + Y VF M A++ ++W ++++G +
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 341 NCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILN 400
C LK DA+ ++I M G+K D + N
Sbjct: 305 -CLLK-------------DAEALMI---RMEKEGIK-----------------PDAITWN 330
Query: 401 AIVDVYGKCGNIDYSRNVFESIESK----DVVSWTSMISSYVHNGLANEALELFYLMNEA 456
++ Y G + + +V ++ K +VVSWT++ S NG AL++F M E
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
V ++ T+ + L LS+L GKE++GF +RK + VA++LVDMY + G L A
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
++F ++ K L W M+ + GRG+ I F M PD ITF ++L C +S
Sbjct: 451 IEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNS 510
Query: 577 GLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCA 636
GL+ EG K+ ++MR Y + P EH +C+VDLLGR+ +L+EA+ F+++M ++P A +W A
Sbjct: 511 GLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGA 570
Query: 637 LLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGL 696
L +C++H + EL EI K+L L+P N NY+++ N+++ +W+DVE++R MR + +
Sbjct: 571 FLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRV 630
Query: 697 KKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVE 756
+ SWI+I +H F A K+H + +IY +L ++ ++++ GYV T + ++
Sbjct: 631 RVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKS-GYVPDTSCIHQDIS 689
Query: 757 EEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVR 816
+ EK ++L GH+E+LA+ YG++K + IR+ KN +C D H+ K +S L RE+V++
Sbjct: 690 DSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQ 749
Query: 817 DANRFHHFEAGVCSCGDYW 835
+ R HHF G CSC D W
Sbjct: 750 EGARVHHFRDGKCSCNDSW 768
Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 147/577 (25%), Positives = 259/577 (44%), Gaps = 68/577 (11%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
YG+C S+ A +LFD++ +R WN ++ + +G + +E + M+ G T
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM-- 119
+++ C+ + G +IHG VL+ G +S + NSL+ MY++ +R++F+ M
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152
Query: 120 --------------------------------GEKEDVVLWNSIISAYSASGQCLEALGL 147
G K D+V WNS++S Y++ G +A+ +
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 148 FREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYAR 207
+ MQ GL + + + LQA + LG IH +++ VYV LI MY +
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272
Query: 208 CGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNA 267
G + A V ++ K+ V+WNS+++G L A ++ G KPD + +
Sbjct: 273 TGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332
Query: 268 VSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDF 327
S LG ++ +G++ + A +
Sbjct: 333 ASGYATLGKPEKA-------------------------------LDVIGKMKEKGVAPNV 361
Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
+SWT I +G ++N AL++F +Q EG+ + + ++L L + KE+HG+
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
+RK L D + A+VD+YGK G++ + +F I++K + SW M+ Y G E
Sbjct: 422 CLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEG 481
Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFNLEGSVASSLVD 505
+ F +M EA +E D+IT S LS + ++++G K + R G S +VD
Sbjct: 482 IAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVD 541
Query: 506 MYARCGALDIANKVFNCVQTK-DLILWTSMINANGLH 541
+ R G LD A + K D +W + +++ +H
Sbjct: 542 LLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 578
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 206/478 (43%), Gaps = 63/478 (13%)
Query: 2 YGKCGSVLDAEQLFDKVS----QRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVD 57
Y K G V DA L D++ + + TWN++L Y S G + RM++ G+
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224
Query: 58 AFTFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFD 117
+ +++A A L G IHG +L+ ++ +L+ MY K AR +FD
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284
Query: 118 RMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFET 177
M K ++V WNS++S S + +A L M++ G+ +A T+
Sbjct: 285 MMDAK-NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW-------------- 329
Query: 178 LGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENK----DSVSWNSML 233
N+L + YA GK +A V+ +++ K + VSW ++
Sbjct: 330 ---------------------NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 368
Query: 234 TGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFV 293
+G +N + A++ F ++Q G P+ + G L L +GKE+H + +++ +
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428
Query: 294 SDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTV 353
D + L+DMY K + +F+ + + SW ++ GYA + + F +
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM 488
Query: 354 QLEGLDADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVY 406
G++ D + SVL C G K + +G I + + +VD+
Sbjct: 489 LEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGII-----PTIEHCSCMVDLL 543
Query: 407 GKCGNIDYSRNVFESIESK-DVVSWTSMISS-YVHNGL-----ANEALELFYLMNEAN 457
G+ G +D + + +++ K D W + +SS +H L A + L++ N AN
Sbjct: 544 GRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSAN 601
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/614 (36%), Positives = 359/614 (58%), Gaps = 12/614 (1%)
Query: 226 SVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHA 285
S WN L L+ +++ +R + +G PD + + L ++G++LH
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 286 YAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQ--MTAQDFISWTTIIAGYAQNNCH 343
+ K G ++ + L+ MY KC V +VF + ++Q + + +I+GY N+
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 344 LKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL-SDLVILNAI 402
A +FR ++ G+ D + + ++ C+ + + + +HG ++ GL S++ +LN+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 403 VDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDS 462
+ +Y KCG+++ R +F+ + K +++W ++IS Y NGLA + LEL+ M + V D
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 463 ITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNC 522
TLVS LS+ + L K G E+ + GF V+++ + MYARCG L A VF+
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 523 VQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEG 582
+ K L+ WT+MI G+HG G++ + LF M PD F+ +L ACSHSGL ++G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 583 KKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACR 642
+ M+ +Y+L+P PEHY+CLVDLLGRA L+EA +F+ SM +EP VW ALLGAC+
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 643 VHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGS 702
+H N ++ E+ K++E +P N G YVL+SN+++ S+ + + ++R+ MR +K PG
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497
Query: 703 SWIEIGNKIHSFIARDKSHSESDEIYKKLAEI-TEKLEREGGYVAQTQFVLHNVEEEEKV 761
S++E ++H F+A D+SH +++E+++ L E+ T +E G + EE
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGN--------MDCDRGEEVS 549
Query: 762 QMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRF 821
HSERLAIA+G+L S G+ I + KNLRVC DCH F K VS++ R+ VVRDA+RF
Sbjct: 550 STTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF 609
Query: 822 HHFEAGVCSCGDYW 835
H+F+ GVCSC DYW
Sbjct: 610 HYFKDGVCSCKDYW 623
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 200/421 (47%), Gaps = 14/421 (3%)
Query: 25 TWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKDLDCGAKIHGLV 84
WN L + Y M G S DAF+FP ++K+CA L G ++H V
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 85 LKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDV-VLWNSIISAYSASGQCLE 143
K G ++ F++ +L++MY KC AR++F+ + + V +N++IS Y+A+ + +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 144 ALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIA 203
A +FR M+ G+ ++ T + + C + LG +H VK G + +V V N+ I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 204 MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVC 263
MY +CG + + ++ K ++WN++++G+ QN L ++ + +++ +G PD
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 264 TVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMT 323
V+ +S+ LG G E+ GFV ++ + N + MYA+C + VF M
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 324 AQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS-------GLK 376
+ +SWT +I Y + L LF + G+ D + VL ACS GL+
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 377 CMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGNIDYSRNVFESIE-SKDVVSWTSMIS 435
K Y + G + +VD+ G+ G +D + ES+ D W +++
Sbjct: 380 LFRAMKR--EYKLEPGPEH---YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434
Query: 436 S 436
+
Sbjct: 435 A 435
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 118/236 (50%), Gaps = 5/236 (2%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KCGSV +LFD++ + + TWNA++ Y NG VLE Y +M+ G+ D FT
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
V+ +CA L G ++ LV G+ F+ N+ ++MYA+C + KAR +FD M
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
K +V W ++I Y G L LF +M + G+ + FV L AC S G+
Sbjct: 320 VK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 181 EIHAATVKSGQNLQVYVAN--ALIAMYARCGKMTEAAGVLYQLE-NKDSVSWNSML 233
E+ A +K L+ + L+ + R G++ EA + + D W ++L
Sbjct: 379 ELFRA-MKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/741 (34%), Positives = 398/741 (53%), Gaps = 89/741 (12%)
Query: 97 NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGL 156
NS+VA Y R AR+LFD M ++ +++ WN ++S Y +G+ EA +F M +
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDR-NIISWNGLVSGYMKNGEIDEARKVFDLMPERNV 110
Query: 157 VTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAG 216
V+ AL+ Y GK+ A
Sbjct: 111 VS---------------------------------------WTALVKGYVHNGKVDVAES 131
Query: 217 VLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGN 276
+ +++ K+ VSW ML GF+Q+ A + + + D + + + + G
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGR 187
Query: 277 LLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAG 336
+ +E+ ++ ++ T++ Y + V+ ++F M + +SWT+++ G
Sbjct: 188 VDEAREIFDEMSERSVIT----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243
Query: 337 YAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDL 396
Y QN A ELF +VM + V+ AC
Sbjct: 244 YVQNGRIEDAEELF----------EVMPVKPVI-AC------------------------ 268
Query: 397 VILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEA 456
NA++ G+ G I +R VF+S++ ++ SW ++I + NG EAL+LF LM +
Sbjct: 269 ---NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 457 NVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 516
V TL+S LS +SL+ L GK+++ ++R F+++ VAS L+ MY +CG L +
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKS 385
Query: 517 NKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKME-AESFAPDHITFLALLYACSH 575
+F+ +KD+I+W S+I+ HG G+ A+ +F +M + S P+ +TF+A L ACS+
Sbjct: 386 KLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSY 445
Query: 576 SGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWC 635
+G++ EG K E M + + P HYAC+VD+LGRA EA + + SM +EP A VW
Sbjct: 446 AGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWG 505
Query: 636 ALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSG 695
+LLGACR HS ++ E AKKL+E++P N G Y+L+SN++A+ +W DV ++R M+
Sbjct: 506 SLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRL 565
Query: 696 LKKTPGSSWIEIGNKIHSFIARD-KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHN 754
++K+PG SW E+ NK+H+F SH E + I K L E+ + L RE GY + LH+
Sbjct: 566 VRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDEL-DGLLREAGYNPDCSYALHD 624
Query: 755 VEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELV 814
V+EEEKV L HSERLA+AY +LK +EG IR+ KNLRVC DCH+ K++S++ RE++
Sbjct: 625 VDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREII 684
Query: 815 VRDANRFHHFEAGVCSCGDYW 835
+RDANRFHHF G CSC DYW
Sbjct: 685 LRDANRFHHFRNGECSCKDYW 705
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 128/552 (23%), Positives = 246/552 (44%), Gaps = 68/552 (12%)
Query: 4 KCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPC 63
+ G + +A +LFD +++ +WN+M+ Y +N P + + M
Sbjct: 29 RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP------------- 75
Query: 64 VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE 123
D N LV+ Y K + +AR++FD M E+
Sbjct: 76 --------------------------DRNIISWNGLVSGYMKNGEIDEARKVFDLMPER- 108
Query: 124 DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE-DSSFETLGMEI 182
+VV W +++ Y +G+ A LF +M V+ + LQ D + + M
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEM-- 166
Query: 183 HAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
+ N+ ++I + G++ EA + ++ + ++W +M+TG+ QN+
Sbjct: 167 ----IPDKDNI---ARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRV 219
Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRL-GNLLNGKELHAYAIKQGFVSDLQIG-N 300
A + F D + VS + L G + NG+ A + + I N
Sbjct: 220 DDARKIF----------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 269
Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
++ + + RVF M ++ SW T+I + +N L+AL+LF +Q +G+
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVF 419
+ S+L C+ L + K++H ++R D+ + + ++ +Y KCG + S+ +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMN-EANVESDSITLVSALSAASSLSIL 478
+ SKD++ W S+IS Y +GL EAL++F M + + + +T V+ LSA S ++
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMV 449
Query: 479 KKGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMI 535
++G ++ + F ++ A + +VDM R G + A ++ + + + D +W S++
Sbjct: 450 EEGLKIYES-MESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 536 NANGLHGRGKVA 547
A H + VA
Sbjct: 509 GACRTHSQLDVA 520
Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 200/446 (44%), Gaps = 35/446 (7%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y K G + +A ++FD + +R V +W A++ YV NG+ + +M +
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKV 142
Query: 62 PCVIKACAMLKD--LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
+ L+D +D K++ ++ D + S++ K +AR++FD M
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 120 GEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLG 179
E+ V+ W ++++ Y + + +A +F M V+ + +Q E L
Sbjct: 199 SER-SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL- 256
Query: 180 MEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
VK V NA+I+ + G++ +A V ++ ++ SW +++ +N
Sbjct: 257 --FEVMPVKP-----VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERN 309
Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG 299
+A+ F +Q G +P ++ +S L +L +GK++HA ++ F D+ +
Sbjct: 310 GFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA 369
Query: 300 NTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEG-L 358
+ LM MY KC + +F + ++D I W +II+GYA + +AL++F + L G
Sbjct: 370 SVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGST 429
Query: 359 DADVMIIGSVLMACS-------GLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYGKCGN 411
+ + + L ACS GLK + + G K ++ +VD+ G+ G
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGV---KPIT--AHYACMVDMLGRAGR 484
Query: 412 IDYSRNVFESIE-SKDVVSWTSMISS 436
+ + + +S+ D W S++ +
Sbjct: 485 FNEAMEMIDSMTVEPDAAVWGSLLGA 510
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 34/267 (12%)
Query: 400 NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVE 459
N + + G I +R +F+S +SK + SW SM++ Y N + +A +LF M + N+
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI- 79
Query: 460 SDSITLVSALSAASSLSILKKGKELNGFI--IRKGFNL--EGSVAS--SLVDMYARCGAL 513
S + L G NG I RK F+L E +V S +LV Y G +
Sbjct: 80 -------------ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 514 DIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYAC 573
D+A +F + K+ + WT M+ GR A L Y+M + D+I ++++
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL-YEMIPDK---DNIARTSMIHGL 182
Query: 574 SHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEV 633
G ++E ++ + M + + W +V G+ N +++A + M E T
Sbjct: 183 CKEGRVDEAREIFDEM-SERSVITW----TTMVTGYGQNNRVDDARKIFDVMP-EKTEVS 236
Query: 634 WCALLGA----CRVHSNKELGEIVAKK 656
W ++L R+ +EL E++ K
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVK 263
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 18/150 (12%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG-ISVDAF 59
MY KCG ++ ++ +FD+ + + WN+++ Y S+G L+ + M + G +
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 60 TFPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTD--FIVNSLVAMYAKCYD-------FR 110
TF + AC+ ++ G KI Y+S + F V + A YA D F
Sbjct: 435 TFVATLSACSYAGMVEEGLKI--------YESMESVFGVKPITAHYACMVDMLGRAGRFN 486
Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQ 140
+A ++ D M + D +W S++ A Q
Sbjct: 487 EAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/753 (33%), Positives = 403/753 (53%), Gaps = 12/753 (1%)
Query: 1 MYGKCGSVLDAEQLFDK-------VSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLG 53
MY KCG + A Q+FD VS R V WN+M+ Y + + RM V G
Sbjct: 104 MYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG 163
Query: 54 ISVDAFTFPCVIKACAMLKDL--DCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK 111
+ DAF+ V+ + + G +IHG +L+ D+ F+ +L+ MY K
Sbjct: 164 VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSID 223
Query: 112 ARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACE 171
A ++F + +K +VVLWN +I + SG C +L L+ + + + +F AL AC
Sbjct: 224 AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283
Query: 172 DSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNS 231
S G +IH VK G + YV +L++MY++CG + EA V + +K WN+
Sbjct: 284 QSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA 343
Query: 232 MLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQG 291
M+ + +ND A+ F ++ PD N +S LG GK +HA K+
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 292 FVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFR 351
S I + L+ +Y+KC C VF M +D ++W ++I+G +N +AL++F
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463
Query: 352 TVQLE--GLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGK 408
++ + L D I+ SV AC+GL+ + ++HG +I+ GL ++ + ++++D+Y K
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSK 523
Query: 409 CGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSA 468
CG + + VF S+ ++++V+W SMIS Y N L +++LF LM + DS+++ S
Sbjct: 524 CGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSV 583
Query: 469 LSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDL 528
L A SS + L KGK L+G+ +R G + + ++L+DMY +CG A +F +Q K L
Sbjct: 584 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 643
Query: 529 ILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEI 588
I W MI G HG A+ LF +M+ +PD +TFL+L+ AC+HSG + EGK E
Sbjct: 644 ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF 703
Query: 589 MRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKE 648
M+ DY ++P EHYA +VDLLGRA LEEAY F+++M IE + +W LL A R H N E
Sbjct: 704 MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE 763
Query: 649 LGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIG 708
LG + A+KLL ++P YV + N++ + + ++ M+ GL K PG SWIE+
Sbjct: 764 LGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVS 823
Query: 709 NKIHSFIARDKSHSESDEIYKKLAEITEKLERE 741
++ + F + S EI+ L + + E
Sbjct: 824 DRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 259 bits (663), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 171/572 (29%), Positives = 299/572 (52%), Gaps = 17/572 (2%)
Query: 27 NAMLGAYVSNGEPLRVLETYSRMRVLGIS---VDAFTFPCVIKACAMLKDLDCGAKIHGL 83
N+ + A + GE L+ L YS+ G S FTFP ++KAC+ L +L G IHG
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHD--GSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 84 VLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------DVVLWNSIISAYSA 137
V+ G+ FI SLV MY KC A Q+FD + + DV +WNS+I Y
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 138 SGQCLEALGLFREMQRVGLVTNAYTFVAALQA-CEDSSF-ETLGMEIHAATVKSGQNLQV 195
+ E +G FR M G+ +A++ + C++ +F G +IH +++ +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 196 YVANALIAMYARCGKMTEAAGVLYQLENKDSVS-WNSMLTGFVQNDLYCKAMQFFRELQG 254
++ ALI MY + G +A V ++E+K +V WN M+ GF + + ++ + +
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 255 AGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNY 314
K A+ A + N G+++H +K G +D + +L+ MY+KC V
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 315 MGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSG 374
VF + + W ++A YA+N+ AL+LF ++ + + D + +V+ CS
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385
Query: 375 LKCMSQTKEIHGYIIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSM 433
L + K +H + ++ + S I +A++ +Y KCG + VF+S+E KD+V+W S+
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSL 445
Query: 434 ISSYVHNGLANEALELFYLM--NEANVESDSITLVSALSAASSLSILKKGKELNGFIIRK 491
IS NG EAL++F M ++ +++ DS + S +A + L L+ G +++G +I+
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505
Query: 492 GFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLF 551
G L V SSL+D+Y++CG ++A KVF + T++++ W SMI+ + +++IDLF
Sbjct: 506 GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF 565
Query: 552 YKMEAESFAPDHITFLALLYACSHSGLINEGK 583
M ++ PD ++ ++L A S + + +GK
Sbjct: 566 NLMLSQGIFPDSVSITSVLVAISSTASLLKGK 597
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/658 (35%), Positives = 375/658 (56%), Gaps = 6/658 (0%)
Query: 181 EIHAATVKSGQNLQVYVANALI--AMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
+IH + + + ++ N L+ ++ R K + Q N +NS++ GFV
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPN--IFLYNSLINGFVN 88
Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
N L+ + + F ++ G + A R + G +LH+ +K GF D+
Sbjct: 89 NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148
Query: 299 GNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGL 358
+L+ +Y+ +N ++F ++ + ++WT + +GY + H +A++LF+ + G+
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 359 DADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRN 417
D I VL AC + + + I Y+ + + + +V++Y KCG ++ +R+
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 418 VFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSI 477
VF+S+ KD+V+W++MI Y N E +ELF M + N++ D ++V LS+ +SL
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 478 LKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINA 537
L G+ I R F +A++L+DMYA+CGA+ +VF ++ KD+++ + I+
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Query: 538 NGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDP 597
+G K++ +F + E +PD TFL LL C H+GLI +G +F + C Y L
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448
Query: 598 WPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKL 657
EHY C+VDL GRA L++AY+ + M + P A VW ALL CR+ + +L E V K+L
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508
Query: 658 LELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIAR 717
+ L+P N GNYV +SN+++ +W + +VR M G+KK PG SWIE+ K+H F+A
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568
Query: 718 DKSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGV 777
DKSH SD+IY KL ++ ++ R G+V T+FV +VEEEEK ++L HSE+LA+A G+
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEM-RLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGL 627
Query: 778 LKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
+ + G +IR+ KNLRVC DCH KL+S++ RE+VVRD NRFH F G CSC DYW
Sbjct: 628 ISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 217/451 (48%), Gaps = 56/451 (12%)
Query: 14 LFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAMLKD 73
LF +F +N+++ +V+N L+ + +R G+ + FTFP V+KAC
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 74 LDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIIS 133
G +H LV+KCG++ + SL+++Y+ A +LFD + ++ VV W ++ S
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS-VVTWTALFS 185
Query: 134 AYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNL 193
Y+ SG+ EA+ LF++M +G+ ++Y V L AC +H + SG+ +
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC-----------VHVGDLDSGEWI 234
Query: 194 QVY-----------VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLY 242
Y V L+ +YA+CGKM +A V + KD V+W++M+ G+ N
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 243 CKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTL 302
+ ++ F ++ KPDQ V +S+ LG L G+ + + F+++L + N L
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 303 MDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLK-ALELFRTVQLEGLDAD 361
+DMYAKC + VF +M +D + I+G A+N H+K + +F + G+ D
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNG-HVKLSFAVFGQTEKLGISPD 413
Query: 362 VMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAI----------------VDV 405
GS + GL C +H +I+ GL NAI VD+
Sbjct: 414 ----GSTFL---GLLCGC----VHAGLIQDGLR---FFNAISCVYALKRTVEHYGCMVDL 459
Query: 406 YGKCGNIDYS-RNVFESIESKDVVSWTSMIS 435
+G+ G +D + R + + + + W +++S
Sbjct: 460 WGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 227/464 (48%), Gaps = 8/464 (1%)
Query: 79 KIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQ--LFDRMGEKEDVVLWNSIISAYS 136
+IH ++ F+VN L+ + FR+ + L + ++ L+NS+I+ +
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLK---RTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFV 87
Query: 137 ASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVY 196
+ E L LF +++ GL + +TF L+AC +S LG+++H+ VK G N V
Sbjct: 88 NNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVA 147
Query: 197 VANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAG 256
+L+++Y+ G++ +A + ++ ++ V+W ++ +G+ + + +A+ F+++ G
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG 207
Query: 257 QKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMG 316
KPD V +SA +G+L +G+ + Y + + + TL+++YAKC +
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 317 RVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLK 376
VF M +D ++W+T+I GYA N+ + +ELF + E L D I L +C+ L
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 377 CMSQTKEIHGYIIR-KGLSDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMIS 435
+ + I R + L++L + NA++D+Y KCG + VF+ ++ KD+V + IS
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 436 SYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKG-KELNGFIIRKGFN 494
NG + +F + + D T + L +++ G + N
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Query: 495 LEGSVASSLVDMYARCGALDIANKVF-NCVQTKDLILWTSMINA 537
+VD++ R G LD A ++ + + I+W ++++
Sbjct: 448 RTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 135/261 (51%), Gaps = 3/261 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y G + DA +LFD++ R+V TW A+ Y ++G ++ + +M +G+ D++
Sbjct: 155 IYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYF 214
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMG 120
V+ AC + DLD G I + + F+ +LV +YAKC KAR +FD M
Sbjct: 215 IVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMV 274
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
EK D+V W+++I Y+++ E + LF +M + L + ++ V L +C LG
Sbjct: 275 EK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG- 332
Query: 181 EIHAATVKSGQNL-QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
E + + + L +++ANALI MYA+CG M V +++ KD V N+ ++G +N
Sbjct: 333 EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKN 392
Query: 240 DLYCKAMQFFRELQGAGQKPD 260
+ F + + G PD
Sbjct: 393 GHVKLSFAVFGQTEKLGISPD 413
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 133/270 (49%), Gaps = 7/270 (2%)
Query: 370 MACSGLKCMSQTKEIHGYIIRKGLS-DLVILNAIVDVYGKCGNIDYSRNVFESIESKDVV 428
+AC+ ++ K+IH +I L D ++N ++ YS +F + ++
Sbjct: 22 VACT----VNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIF 77
Query: 429 SWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFI 488
+ S+I+ +V+N L +E L+LF + + + T L A + S K G +L+ +
Sbjct: 78 LYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLV 137
Query: 489 IRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAI 548
++ GFN + + +SL+ +Y+ G L+ A+K+F+ + + ++ WT++ + GR + AI
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197
Query: 549 DLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDL 608
DLF KM PD + +L AC H G ++ G+ ++ M + ++ LV+L
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME-EMEMQKNSFVRTTLVNL 256
Query: 609 LGRANHLEEAYQFVRSMQIEPTAEVWCALL 638
+ +E+A SM +E W ++
Sbjct: 257 YAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/691 (34%), Positives = 383/691 (55%), Gaps = 38/691 (5%)
Query: 182 IHAATVKSGQNLQVYVANALIA---MYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQ 238
IHA +K G + Y + LI + + A V ++ + + WN+M G
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 239 NDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQI 298
+ A++ + + G P+ + + + G+++H + +K G DL +
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 299 GNTLMDMYAKCC----------------CVNYMG---------------RVFYQMTAQDF 327
+L+ MY + V+Y ++F ++ +D
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 328 ISWTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGY 387
+SW +I+GYA+ + +ALELF+ + + D + +V+ AC+ + +++H +
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 388 IIRKGL-SDLVILNAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
I G S+L I+NA++D+Y KCG ++ + +FE + KDV+SW ++I Y H L EA
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIR--KGFNLEGSVASSLV 504
L LF M + + +T++S L A + L + G+ ++ +I + KG S+ +SL+
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 411
Query: 505 DMYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHI 564
DMYA+CG ++ A++VFN + K L W +MI +HGR + DLF +M PD I
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471
Query: 565 TFLALLYACSHSGLINEGKKFLEIMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRS 624
TF+ LL ACSHSG+++ G+ M DY++ P EHY C++DLLG + +EA + +
Sbjct: 472 TFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 531
Query: 625 MQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDV 684
M++EP +WC+LL AC++H N ELGE A+ L++++P NPG+YVL+SN++A++ +W +V
Sbjct: 532 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 591
Query: 685 EQVRMRMRGSGLKKTPGSSWIEIGNKIHSFIARDKSHSESDEIYKKLAEITEKLEREGGY 744
+ R + G+KK PG S IEI + +H FI DK H + EIY L E+ LE+ G+
Sbjct: 592 AKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK-AGF 650
Query: 745 VAQTQFVLHNVEEEEKVQMLYGHSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKL 804
V T VL +EEE K L HSE+LAIA+G++ + G+ + I KNLRVC +CH KL
Sbjct: 651 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 710
Query: 805 VSRLFGRELVVRDANRFHHFEAGVCSCGDYW 835
+S+++ RE++ RD RFHHF GVCSC DYW
Sbjct: 711 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 219 bits (558), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 150/552 (27%), Positives = 276/552 (50%), Gaps = 50/552 (9%)
Query: 64 VIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRK---ARQLFDRMG 120
++ C L+ L IH ++K G +T++ ++ L+ F A +F +
Sbjct: 39 LLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 121 EKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGM 180
E ++++WN++ ++ S + AL L+ M +GL+ N+YTF L++C S G
Sbjct: 96 EP-NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 181 EIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ-------------------- 220
+IH +K G +L +YV +LI+MY + G++ +A V +
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 221 -LEN----------KDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVS 269
+EN KD VSWN+M++G+ + Y +A++ F+++ +PD+ V VS
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 270 ASGRLGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFIS 329
A + G++ G+++H + GF S+L+I N L+D+Y+KC + +F ++ +D IS
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 330 WTTIIAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYII 389
W T+I GY N + +AL LF+ + G + + + S+L AC+ L + + IH YI
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 390 R--KGLSDLVIL-NAIVDVYGKCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEA 446
+ KG+++ L +++D+Y KCG+I+ + VF SI K + SW +MI + +G A+ +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 447 LELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVA--SSLV 504
+LF M + ++ D IT V LSA S +L G+ + + + + + + ++
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR-TMTQDYKMTPKLEHYGCMI 513
Query: 505 DMYARCGALD-IANKVFNCVQTKDLILWTSMINANGLHGR---GKVAIDLFYKMEAESFA 560
D+ G + D ++W S++ A +HG G+ + K+E E+
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN-- 571
Query: 561 PDHITFLALLYA 572
P L+ +YA
Sbjct: 572 PGSYVLLSNIYA 583
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 198/395 (50%), Gaps = 32/395 (8%)
Query: 11 AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFPCVIKACAM 70
A +F + + + WN M + + +P+ L+ Y M LG+ +++TFP V+K+CA
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 71 LKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGEKE------- 123
K G +IHG VLK G D ++ SL++MY + A ++FD+ ++
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 124 -----------------------DVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNA 160
DVV WN++IS Y+ +G EAL LF++M + + +
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 161 YTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQ 220
T V + AC S LG ++H G + + NALI +Y++CG++ A G+ +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 221 LENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNG 280
L KD +SWN+++ G+ +LY +A+ F+E+ +G+ P+ V ++ + A LG + G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 281 KELHAYAIK--QGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYA 338
+ +H Y K +G + + +L+DMYAKC + +VF + + SW +I G+A
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 339 QNNCHLKALELFRTVQLEGLDADVMIIGSVLMACS 373
+ + +LF ++ G+ D + +L ACS
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481
Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 139/284 (48%), Gaps = 3/284 (1%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTF 61
Y G + +A++LFD++ + V +WNAM+ Y G LE + M + D T
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 62 PCVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRMGE 121
V+ ACA ++ G ++H + G+ S IVN+L+ +Y+KC + A LF+R+
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 122 KEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETLGME 181
K DV+ WN++I Y+ EAL LF+EM R G N T ++ L AC +G
Sbjct: 330 K-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 182 IHAATVK--SGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQN 239
IH K G + +LI MYA+CG + A V + +K SWN+M+ GF +
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 240 DLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKEL 283
+ F ++ G +PD + V +SA G L G+ +
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
+Y KCG + A LF+++ + V +WN ++G Y L + M G + + T
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 61 FPCVIKACAMLKDLDCGAKIHGLVLK--CGYDSTDFIVNSLVAMYAKCYDFRKARQLFDR 118
++ ACA L +D G IH + K G + + SL+ MYAKC D A Q+F+
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 119 MGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQACEDSSFETL 178
+ K + WN++I ++ G+ + LF M+++G+ + TFV L AC S L
Sbjct: 430 ILHKS-LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 179 GMEI 182
G I
Sbjct: 489 GRHI 492
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 126/290 (43%), Gaps = 23/290 (7%)
Query: 442 LANEALELFYLMNEANVESDSITLVSALSAASSLSILKKGKELNGFIIRKGFNLEGSVAS 501
+ + + +L + ++ DSI +LS + L+ + ++ +I+ G + S
Sbjct: 10 VPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALS 69
Query: 502 SLVD---MYARCGALDIANKVFNCVQTKDLILWTSMINANGLHGRGKVAIDLFYKMEAES 558
L++ + L A VF +Q +L++W +M + L A+ L+ M +
Sbjct: 70 KLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG 129
Query: 559 FAPDHITFLALLYACSHSGLINEGKKFL-EIMRCDYQLDPWPEHYACLVDLLGRANHLEE 617
P+ TF +L +C+ S EG++ +++ LD + + L+ + + LE+
Sbjct: 130 LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV--HTSLISMYVQNGRLED 187
Query: 618 AYQ-FVRSMQIEPTAEV--WCALLG--ACRVH---SNKELGEIVAKKLLELDPGNPGNYV 669
A++ F +S P +V + AL+ A R + + K EI K ++ + G Y
Sbjct: 188 AHKVFDKS----PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG-YA 242
Query: 670 LISNVFAASRKWKDVEQVRMRMRGSGL----KKTPGSSWIEIGNKIHSFI 715
N A +KD+ + +R S + S IE+G ++H +I
Sbjct: 243 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 258/729 (35%), Positives = 397/729 (54%), Gaps = 63/729 (8%)
Query: 111 KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVTNAYTFVAALQAC 170
+AR+ FD + K + WNSI+S Y ++G EA LF EM +V+
Sbjct: 35 EARKFFDSLQFKA-IGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVS------------ 81
Query: 171 EDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWN 230
N L++ Y + + EA V + ++ VSW
Sbjct: 82 ---------------------------WNGLVSGYIKNRMIVEARNVFELMPERNVVSWT 114
Query: 231 SMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLN-GKELHAYAIK 289
+M+ G++Q + +A F + P++ N VS + G L++ G+ A +
Sbjct: 115 AMVKGYMQEGMVGEAESLFWRM------PER----NEVSWTVMFGGLIDDGRIDKARKLY 164
Query: 290 QGF-VSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALE 348
V D+ ++ + V+ +F +M ++ ++WTT+I GY QNN A +
Sbjct: 165 DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARK 224
Query: 349 LFRTV-QLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLVILNAIVDVYG 407
LF + + + M++G L SG + ++ + + ++ NA++ +G
Sbjct: 225 LFEVMPEKTEVSWTSMLLGYTL---SG-----RIEDAEEFFEVMPMKPVIACNAMIVGFG 276
Query: 408 KCGNIDYSRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVS 467
+ G I +R VF+ +E +D +W MI +Y G EAL+LF M + V +L+S
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 468 ALSAASSLSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIANKVFNCVQTKD 527
LS ++L+ L+ G++++ ++R F+ + VAS L+ MY +CG L A VF+ +KD
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 528 LILWTSMINANGLHGRGKVAIDLFYKMEAESFAPDHITFLALLYACSHSGLINEGKKFLE 587
+I+W S+I+ HG G+ A+ +F++M + P+ +T +A+L ACS++G + EG + E
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 588 IMRCDYQLDPWPEHYACLVDLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNK 647
M + + P EHY+C VD+LGRA +++A + + SM I+P A VW ALLGAC+ HS
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRL 516
Query: 648 ELGEIVAKKLLELDPGNPGNYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 707
+L E+ AKKL E +P N G YVL+S++ A+ KW DV VR MR + + K PG SWIE+
Sbjct: 517 DLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEV 576
Query: 708 GNKIHSFIARD-KSHSESDEIYKKLAEITEKLEREGGYVAQTQFVLHNVEEEEKVQMLYG 766
G K+H F K+H E I L E T+ L RE GY VLH+V+EEEKV L
Sbjct: 577 GKKVHMFTRGGIKNHPEQAMILMML-EKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSR 635
Query: 767 HSERLAIAYGVLKSTEGSLIRITKNLRVCVDCHSFCKLVSRLFGRELVVRDANRFHHFEA 826
HSERLA+AYG+LK EG IR+ KNLRVC DCH+ KL+S++ RE+++RDANRFHHF
Sbjct: 636 HSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNN 695
Query: 827 GVCSCGDYW 835
G CSC DYW
Sbjct: 696 GECSCRDYW 704
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 242/523 (46%), Gaps = 51/523 (9%)
Query: 89 YDSTDFIV----NSLVAMYAKCYDFRKARQLFDRMGEKEDVVLWNSIISAYSASGQCLEA 144
+DS F NS+V+ Y ++ARQLFD M E+ +VV WN ++S Y + +EA
Sbjct: 40 FDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER-NVVSWNGLVSGYIKNRMIVEA 98
Query: 145 LGLFREMQ---------------RVGLVTNAYTFVAALQACEDSSFETL-GMEIHAATVK 188
+F M + G+V A + + + S+ + G I +
Sbjct: 99 RNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRID 158
Query: 189 SGQNL-------QVYVANALIAMYARCGKMTEAAGVLYQLENKDSVSWNSMLTGFVQNDL 241
+ L V + +I R G++ EA + ++ ++ V+W +M+TG+ QN+
Sbjct: 159 KARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNR 218
Query: 242 YCKAMQFFRELQGAGQKPDQVCTVNAVSASGRLGNLLNGKELHAYAIKQGFVSDLQIG-N 300
A + F + P++ S LG L+G+ A + I N
Sbjct: 219 VDVARKLFEVM------PEK---TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN 269
Query: 301 TLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTIIAGYAQNNCHLKALELFRTVQLEGLDA 360
++ + + ++ RVF M +D +W +I Y + L+AL+LF +Q +G+
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329
Query: 361 DVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGLSDLV-ILNAIVDVYGKCGNIDYSRNVF 419
+ S+L C+ L + +++H +++R D V + + ++ +Y KCG + ++ VF
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVF 389
Query: 420 ESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASSLSILK 479
+ SKD++ W S+IS Y +GL EAL++F+ M + + +TL++ L+A S L+
Sbjct: 390 DRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLE 449
Query: 480 KGKELNGFIIRKGFNLEGSVA--SSLVDMYARCGALDIANKVFNCVQTK-DLILWTSMIN 536
+G E+ + K F + +V S VDM R G +D A ++ + K D +W +++
Sbjct: 450 EGLEIFESMESK-FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
Query: 537 ANGLHGR---GKVAIDLFYKMEAESFAPDHITFLALLYACSHS 576
A H R +VA ++ E PD+ LL + + S
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENE-----PDNAGTYVLLSSINAS 546
Score = 132 bits (333), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 236/520 (45%), Gaps = 50/520 (9%)
Query: 2 YGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNG---EPLRVLETYSRMRVLGIS--V 56
Y G +A QLFD++S+R V +WN ++ Y+ N E V E V+ + V
Sbjct: 58 YFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMV 117
Query: 57 DAFTFPCVI-KACAMLKDLDCGAKIHGLVLKCG-------------YDSTDF--IVNSLV 100
+ ++ +A ++ + ++ V+ G YD +V S
Sbjct: 118 KGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTN 177
Query: 101 AMYAKCYDFR--KARQLFDRMGEKEDVVLWNSIISAYSASGQCLEALGLFREMQRVGLVT 158
+ C + R +AR +FD M E+ +VV W ++I+ Y + + A LF M V+
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRER-NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS 236
Query: 159 -----NAYTFVAALQACEDSSFETLGMEIHAATVKSGQNLQVYVANALIAMYARCGKMTE 213
YT ++ E+ FE + M+ V NA+I + G++++
Sbjct: 237 WTSMLLGYTLSGRIEDAEE-FFEVMPMK------------PVIACNAMIVGFGEVGEISK 283
Query: 214 AAGVLYQLENKDSVSWNSMLTGFVQNDLYCKAMQFFRELQGAGQKPDQVCTVNAVSASGR 273
A V +E++D+ +W M+ + + +A+ F ++Q G +P ++ +S
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCAT 343
Query: 274 LGNLLNGKELHAYAIKQGFVSDLQIGNTLMDMYAKCCCVNYMGRVFYQMTAQDFISWTTI 333
L +L G+++HA+ ++ F D+ + + LM MY KC + VF + +++D I W +I
Sbjct: 344 LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 334 IAGYAQNNCHLKALELFRTVQLEGLDADVMIIGSVLMACSGLKCMSQTKEIHGYIIRKGL 393
I+GYA + +AL++F + G + + + ++L ACS + + EI + K
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463
Query: 394 SDLVI--LNAIVDVYGKCGNIDYSRNVFESIESK-DVVSWTSMISS-YVHNGLANEALEL 449
+ + VD+ G+ G +D + + ES+ K D W +++ + H+ L +
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAA 523
Query: 450 FYLMNEANVESDSITLVSALSAASS----LSILKKGKELN 485
L + + L+S+++A+ S +++++K N
Sbjct: 524 KKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 1 MYGKCGSVLDAEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFT 60
MY KCG ++ A+ +FD+ S + + WN+++ Y S+G L+ + M G + T
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434
Query: 61 FPCVIKACAMLKDLDCGAKI-HGLVLKCGYDSTDFIVNSLVAMYAKCYDFRKARQLFDRM 119
++ AC+ L+ G +I + K T + V M + KA +L + M
Sbjct: 435 LIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM 494
Query: 120 GEKEDVVLWNSIISA 134
K D +W +++ A
Sbjct: 495 TIKPDATVWGALLGA 509
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 294,804,279
Number of Sequences: 539616
Number of extensions: 12089292
Number of successful extensions: 38275
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 28781
Number of HSP's gapped (non-prelim): 2587
length of query: 835
length of database: 191,569,459
effective HSP length: 126
effective length of query: 709
effective length of database: 123,577,843
effective search space: 87616690687
effective search space used: 87616690687
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)