BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043957
(584 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 177/314 (56%), Gaps = 30/314 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y+K+ K+GQGT+ V+KA R TG+ VALKKV + + REI ILQ L H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 187 VKLEGLATS------RMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQ 234
V L + + R + S+YLVF+F + DLA ++SN K T Q LL+GL
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS------PNKKRPLTSRVVTLWYR 288
+ H ILHRD+K +N+LI ++GVLK+ADFGLA FS PN+ +RVVTLWYR
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR---YXNRVVTLWYR 196
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKK 348
PELLLG DYG IDLW AGC++AEM+ PIM G TE QL I +LCGS + + W
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 349 L-------RLSTTFRPPQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNE 401
+ +L + K RL +A+ P DPA R + AL ++
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRL-KAYVRDP-YALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 402 FFFTSPLACDLSGL 415
FF++ P+ DL G+
Sbjct: 315 FFWSDPMPSDLKGM 328
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 177/314 (56%), Gaps = 30/314 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y+K+ K+GQGT+ V+KA R TG+ VALKKV + + REI ILQ L H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 187 VKLEGLATS------RMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQ 234
V L + + R + S+YLVF+F + DLA ++SN K T Q LL+GL
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS------PNKKRPLTSRVVTLWYR 288
+ H ILHRD+K +N+LI ++GVLK+ADFGLA FS PN+ +RVVTLWYR
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR---YXNRVVTLWYR 196
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKK 348
PELLLG DYG IDLW AGC++AEM+ PIM G TE QL I +LCGS + + W
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 349 L-------RLSTTFRPPQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNE 401
+ +L + K RL +A+ P DPA R + AL ++
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRL-KAYVRDP-YALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 402 FFFTSPLACDLSGL 415
FF++ P+ DL G+
Sbjct: 315 FFWSDPMPSDLKGM 328
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 177/314 (56%), Gaps = 30/314 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y+K+ K+GQGT+ V+KA R TG+ VALKKV + + REI ILQ L H N+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 187 VKLEGLATS------RMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQ 234
V L + + R + S+YLVF+F + DLA ++SN K T Q LL+GL
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 138
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS------PNKKRPLTSRVVTLWYR 288
+ H ILHRD+K +N+LI ++GVLK+ADFGLA FS PN+ +RVVTLWYR
Sbjct: 139 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR---YXNRVVTLWYR 195
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKK 348
PELLLG DYG IDLW AGC++AEM+ PIM G TE QL I +LCGS + + W
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 255
Query: 349 L-------RLSTTFRPPQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNE 401
+ +L + K RL +A+ P DPA R + AL ++
Sbjct: 256 VDNYELYEKLELVKGQKRKVKDRL-KAYVRDP-YALDLIDKLLVLDPAQRIDSDDALNHD 313
Query: 402 FFFTSPLACDLSGL 415
FF++ P+ DL G+
Sbjct: 314 FFWSDPMPSDLKGM 327
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 177/314 (56%), Gaps = 30/314 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y+K+ K+GQGT+ V+KA R TG+ VALKKV + + REI ILQ L H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 187 VKLEGLATS------RMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQ 234
V L + + R + S+YLVF+F + DLA ++SN K T Q LL+GL
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS------PNKKRPLTSRVVTLWYR 288
+ H ILHRD+K +N+LI ++GVLK+ADFGLA FS PN+ +RVVTLWYR
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR---YXNRVVTLWYR 196
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKK 348
PELLLG DYG IDLW AGC++AEM+ PIM G TE QL I +LCGS + + W
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 349 L-------RLSTTFRPPQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNE 401
+ +L + K RL +A+ P DPA R + AL ++
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRL-KAYVRDP-YALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 402 FFFTSPLACDLSGL 415
FF++ P+ DL G+
Sbjct: 315 FFWSDPMPSDLKGM 328
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 165/292 (56%), Gaps = 12/292 (4%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
P+ E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 181 LDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGL 233
L+HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 66 LNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
CH +LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+L
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEIL 182
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLST 353
LG Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W +
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 242
Query: 354 TFRP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
++P P+ + + E DP R SA +AL + FF
Sbjct: 243 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 164/292 (56%), Gaps = 12/292 (4%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
P S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 181 LDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGL 233
L+HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 61 LNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+L
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEIL 177
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLST 353
LG Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 237
Query: 354 TFRP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
++P P+ + + E DP R SA +AL + FF
Sbjct: 238 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 165/292 (56%), Gaps = 12/292 (4%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
P+ E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 181 LDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGL 233
L+HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 66 LNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
CH +LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+L
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEIL 182
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLST 353
LG Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W +
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 242
Query: 354 TFRP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
++P P+ + + E DP R SA +AL + FF
Sbjct: 243 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 164/292 (56%), Gaps = 12/292 (4%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
P S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 181 LDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGL 233
L+HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 61 LNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+L
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEIL 177
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLST 353
LG Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 237
Query: 354 TFRP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
++P P+ + + E DP R SA +AL + FF
Sbjct: 238 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 164/290 (56%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 62 HPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+LLG
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLG 178
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 164/292 (56%), Gaps = 12/292 (4%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
P S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 181 LDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGL 233
L+HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 62 LNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEIL 178
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLST 353
LG Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 354 TFRP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
++P P+ + + E DP R SA +AL + FF
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 164/292 (56%), Gaps = 12/292 (4%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
P S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 181 LDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGL 233
L+HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 61 LNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+L
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEIL 177
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLST 353
LG Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 237
Query: 354 TFRP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
++P P+ + + E DP R SA +AL + FF
Sbjct: 238 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 163/292 (55%), Gaps = 12/292 (4%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
P S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 181 LDHPNIVKLEGLATSRMQYSLYLVFEFMQTDL-----ARIISNPEGKLTEPQ--QLLSGL 233
L+HPNIVKL L + LYLVFEF+ DL A ++ L + QLL GL
Sbjct: 62 LNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEIL 178
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLST 353
LG Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 354 TFRP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
++P P+ + + E DP R SA +AL + FF
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 163/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 67 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+LLG
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 163/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 63 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 163/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 63 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 163/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 62 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 163/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 63 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 163/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 62 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 163/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 63 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 62 HPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 178
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 65 HPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 181
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 61 HPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 177
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 64 HPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 180
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 61 HPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 177
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 64 HPNIVKL--LDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 180
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 62 HPNIVKL--LDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 178
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 62 HPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 178
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 61 HPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 177
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL + + ++ + P QLL GL
Sbjct: 61 HPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 177
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 179/300 (59%), Gaps = 17/300 (5%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKF---DTSEPHSVKFMAREIM 176
V A+ Y+K+D +G+G ++ VYKA D++T +IVA+KK+K ++ + REI
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 177 ILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQL------- 229
+LQ+L HPNI+ L L + ++ LVF+FM+TDL II + LT P +
Sbjct: 65 LLQELSHPNIIGL--LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLT-PSHIKAYMLMT 121
Query: 230 LSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF-SPNKKRPLTSRVVTLWYR 288
L GL++ H ILHRD+K +NLL+D+NGVLK+ADFGLA F SPN R +VVT WYR
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN--RAYXHQVVTRWYR 179
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKK 348
APELL GA YGVG+D+W+ GC+LAE+ L P +PG ++++QL RIF+ G+P+E+ W
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD 239
Query: 349 LRLSTTFRPPQSYK-PRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFFFTSP 407
+ + +S+ L FS + +P R +A ALK ++F P
Sbjct: 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 299
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 162/290 (55%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDL-----ARIISNPEGKLTEPQ--QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL A ++ L + QLL GL
Sbjct: 61 HPNIVKL--LDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 177
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 162/290 (55%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDL-----ARIISNPEGKLTEPQ--QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL A ++ L + QLL GL
Sbjct: 63 HPNIVKL--LDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 179
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 162/290 (55%), Gaps = 12/290 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDL-----ARIISNPEGKLTEPQ--QLLSGLQH 235
HPNIVKL L + LYLVFEF+ DL A ++ L + QLL GL
Sbjct: 64 HPNIVKL--LDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLG 180
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 356 RP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+P P+ + + E DP R SA +AL + FF
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 162/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 64 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 162/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VAL K++ DT REI +L++L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 63 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 162/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VAL K++ DT REI +L++L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 62 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 162/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 62 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 163/292 (55%), Gaps = 12/292 (4%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
P S E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 181 LDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGL 233
L+HPNIVKL L + LYLVFE + DL + + ++ + P QLL GL
Sbjct: 62 LNHPNIVKL--LDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
CH +LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEIL 178
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLST 353
LG Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 354 TFRP--PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
++P P+ + + E DP R SA +AL + FF
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 162/288 (56%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCH 237
NIVKL L + LYLVFEF+ DL + + ++ + P QLL GL CH
Sbjct: 62 NIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R VVTLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 25/294 (8%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E Y K++KVG+GTY VYKA D G+IVALK+++ D + REI +L++L HP
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
NIV L + S + L LVFEFM+ DL +++ + L + Q QLL G+ HCH
Sbjct: 80 NIVSLIDVIHS--ERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
ILHRD+K NLLI+ +G LK+ADFGLA F R T VVTLWYRAP++L+G+
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFG-IPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRPP 358
Y +D+WS GC+ AEM G+P+ PG T+ +QL +IF + G+P+ W +++
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL---- 252
Query: 359 QSYKPRLFEAFSE---------FPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+K R F+ F + F + DP R SA A+ + +F
Sbjct: 253 --WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 161/288 (55%), Gaps = 12/288 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E++ K++K+G+GTY VYKA ++ TG++VALKK++ DT REI +L++L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDL-----ARIISNPEGKLTEPQ--QLLSGLQHCH 237
NIVKL L + LYLVFE + DL A ++ L + QLL GL CH
Sbjct: 62 NIVKL--LDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+LHRD+K NLLI+ G +K+ADFGLA F R T VVTLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRP 357
Y +D+WS GC+ AEM R + PG +E++QL RIF+ G+P E W + ++P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 358 --PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
P+ + + E DP R SA +AL + FF
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 25/294 (8%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E Y K++KVG+GTY VYKA D G+IVALK+++ D + REI +L++L HP
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
NIV L + S + L LVFEFM+ DL +++ + L + Q QLL G+ HCH
Sbjct: 80 NIVSLIDVIHS--ERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
ILHRD+K NLLI+ +G LK+ADFGLA F R T VVTLWYRAP++L+G+
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFG-IPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRPP 358
Y +D+WS GC+ AEM G+P+ PG T+ +QL +IF + G+P+ W +++
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL---- 252
Query: 359 QSYKPRLFEAFSE---------FPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+K R F+ F + F + DP R SA A+ + +F
Sbjct: 253 --WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 166/287 (57%), Gaps = 12/287 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E Y ++K+G+GTY VYKA + G+ ALKK++ + + REI IL++L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
NIVKL + ++ + L LVFE + DL +++ EG L QLL+G+ +CHD
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
R +LHRD+K NLLI++ G LKIADFGLA F R T VVTLWYRAP++L+G+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRPP 358
Y ID+WS GC+ AEM G P+ PG +E +QL RIF++ G+P+ W + + P
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 359 QS-YKPRLFEAFSE-FPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+ Y+P +E+F + E DP R +A AL++ +F
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 166/287 (57%), Gaps = 12/287 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E Y ++K+G+GTY VYKA + G+ ALKK++ + + REI IL++L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
NIVKL + ++ + L LVFE + DL +++ EG L QLL+G+ +CHD
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
R +LHRD+K NLLI++ G LKIADFGLA F R T VVTLWYRAP++L+G+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRPP 358
Y ID+WS GC+ AEM G P+ PG +E +QL RIF++ G+P+ W + + P
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 359 QS-YKPRLFEAFSE-FPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+ Y+P +E+F + E DP R +A AL++ +F
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 166/287 (57%), Gaps = 12/287 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E Y ++K+G+GTY VYKA + G+ ALKK++ + + REI IL++L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
NIVKL + ++ + L LVFE + DL +++ EG L QLL+G+ +CHD
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
R +LHRD+K NLLI++ G LKIADFGLA F R T +VTLWYRAP++L+G+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRPP 358
Y ID+WS GC+ AEM G P+ PG +E +QL RIF++ G+P+ W + + P
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 359 QS-YKPRLFEAFSE-FPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+ Y+P +E+F + E DP R +A AL++ +F
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 167/295 (56%), Gaps = 16/295 (5%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ Y+K++K+G+GTY V+KA +R+T +IVALK+V+ D + REI +L++L H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-------QLLSGLQHCH 237
NIV+L + S + L LVFEF DL + + G L +P+ QLL GL CH
Sbjct: 62 NIVRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGFCH 118
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
R +LHRD+K NLLI++NG LK+A+FGLA F R ++ VVTLWYR P++L GA
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFG-IPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 298 DYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFR 356
Y ID+WSAGC+ AE+ GRP+ PG +QL RIF+L G+P+E+ W + ++
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237
Query: 357 PPQSY--KPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF--FTSP 407
P Y L + +P R SA AL++ +F F P
Sbjct: 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 166/295 (56%), Gaps = 16/295 (5%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ Y+K++K+G+GTY V+KA +R+T +IVALK+V+ D + REI +L++L H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-------QLLSGLQHCH 237
NIV+L + S + L LVFEF DL + + G L +P+ QLL GL CH
Sbjct: 62 NIVRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGFCH 118
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
R +LHRD+K NLLI++NG LK+ADFGLA F R ++ VVTLWYR P++L GA
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFG-IPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 298 DYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFR 356
Y ID+WSAGC+ AE+ RP+ PG +QL RIF+L G+P+E+ W + ++
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237
Query: 357 PPQSY--KPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF--FTSP 407
P Y L + +P R SA AL++ +F F P
Sbjct: 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 151/252 (59%), Gaps = 15/252 (5%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S+ + +++K+G GTY+ VYK L++ TG VALK+VK D SE + REI ++++L
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLD-SEEGTPSTAIREISLMKELK 61
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDL-----ARIISN-PEG---KLTE--PQQLLS 231
H NIV+L + + + L LVFEFM DL +R + N P G L + QLL
Sbjct: 62 HENIVRLYDVIHT--ENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
GL CH+ ILHRD+K NLLI+K G LK+ DFGLA F +S VVTLWYRAP+
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI-PVNTFSSEVVTLWYRAPD 178
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
+L+G+ Y ID+WS GC+LAEM G+P+ PG + EQL IF + G+P+E W +
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238
Query: 352 STTFRPPQSYKP 363
+ P +P
Sbjct: 239 LPKYNPNIQQRP 250
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 163/292 (55%), Gaps = 17/292 (5%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E+Y K+DK+G+GTY+ VYK + T +VALK+++ + E + RE+ +L+ L H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHA 60
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-------QLLSGLQHCH 237
NIV L + + + SL LVFE++ DL + + + G + QLL GL +CH
Sbjct: 61 NIVTLHDIIHT--EKSLTLVFEYLDKDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCH 117
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS-PNKKRPLTSRVVTLWYRAPELLLGA 296
+ +LHRD+K NLLI++ G LK+ADFGLA S P K + VVTLWYR P++LLG+
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD--NEVVTLWYRPPDILLGS 175
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFR 356
TDY ID+W GC+ EM GRP+ PG T EQLH IF++ G+P+E+ W + + F+
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235
Query: 357 PPQSYKPRLFEAFSEFPEXX---XXXXXXXXXXDPAYRGSAASALKNEFFFT 405
K R S P + R SA A+K+ FF +
Sbjct: 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 140/234 (59%), Gaps = 13/234 (5%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S + Y +I K+G+GTY VYKA+D T + VA+K+++ + E RE+ +L++L
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIIS-NPEGKLTEPQ----QLLSGLQHCH 237
H NI++L+ + + L+L+FE+ + DL + + NP+ + + QL++G+ CH
Sbjct: 92 HRNIIELKSVI--HHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 238 DRGILHRDVKGSNLLID-----KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
R LHRD+K NLL+ + VLKI DFGLA F R T ++TLWYR PE+
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG-IPIRQFTHEIITLWYRPPEI 208
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
LLG+ Y +D+WS C+ AEM + P+ PG +E++QL +IF++ G P + W
Sbjct: 209 LLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 18/291 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD---H 183
Y+ + ++G G Y VYKA D +G VALK V+ E RE+ +L++L+ H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 184 PNIVKL-EGLATSRM--QYSLYLVFEFMQTDLARII--SNPEGKLTEP-----QQLLSGL 233
PN+V+L + ATSR + + LVFE + DL + + P G E +Q L GL
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
H I+HRD+K N+L+ G +K+ADFGLA +S + L VVTLWYRAPE+L
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALAPVVVTLWYRAPEVL 183
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW-KKLRLS 352
L +T Y +D+WS GC+ AEMF +P+ G +E +QL +IF L G P ED W + + L
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 353 TTFRPPQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
PP+ +P + E E +P R SA AL++ +
Sbjct: 243 RGAFPPRGPRP-VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 18/291 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD---H 183
Y+ + ++G G Y VYKA D +G VALK V+ E RE+ +L++L+ H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 184 PNIVKL-EGLATSRM--QYSLYLVFEFMQTDLARII--SNPEGKLTEP-----QQLLSGL 233
PN+V+L + ATSR + + LVFE + DL + + P G E +Q L GL
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
H I+HRD+K N+L+ G +K+ADFGLA +S + L VVTLWYRAPE+L
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALDPVVVTLWYRAPEVL 183
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW-KKLRLS 352
L +T Y +D+WS GC+ AEMF +P+ G +E +QL +IF L G P ED W + + L
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 353 TTFRPPQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
PP+ +P + E E +P R SA AL++ +
Sbjct: 243 RGAFPPRGPRP-VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 18/291 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD---H 183
Y+ + ++G G Y VYKA D +G VALK V+ E RE+ +L++L+ H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 184 PNIVKL-EGLATSRM--QYSLYLVFEFMQTDLARII--SNPEGKLTEP-----QQLLSGL 233
PN+V+L + ATSR + + LVFE + DL + + P G E +Q L GL
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
H I+HRD+K N+L+ G +K+ADFGLA +S + L VVTLWYRAPE+L
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALFPVVVTLWYRAPEVL 183
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW-KKLRLS 352
L +T Y +D+WS GC+ AEMF +P+ G +E +QL +IF L G P ED W + + L
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 353 TTFRPPQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
PP+ +P + E E +P R SA AL++ +
Sbjct: 243 RGAFPPRGPRP-VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 165/300 (55%), Gaps = 25/300 (8%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALD-RDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
++ + Y+ + ++G+G Y V+KA D ++ G+ VALK+V+ T E RE+ +L+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 181 LD---HPNIVKLEGLAT---SRMQYSLYLVFEFMQTDLARIISN-PE-GKLTEPQ----- 227
L+ HPN+V+L + T + + L LVFE + DL + PE G TE
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWY 287
QLL GL H ++HRD+K N+L+ +G +K+ADFGLA +S + LTS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS--FQMALTSVVVTLWY 185
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWK 347
RAPE+LL ++ Y +DLWS GC+ AEMF +P+ G ++V+QL +I + G P E+ W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 348 KLRLSTTFRPPQSYKPRLFEAFSEF----PEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+ P Q++ + + +F E +PA R SA SAL + +F
Sbjct: 245 R----DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 141/245 (57%), Gaps = 29/245 (11%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHS-VKFMAREIMILQKLD-HP 184
Y+ + K+G+G Y V+K++DR TG++VA+KK+ FD + + + REIMIL +L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIIS----NPEGKLTEPQQLLSGLQHCHDRG 240
NIV L + + +YLVF++M+TDL +I P K QL+ +++ H G
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 241 ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP---------------------LT 279
+LHRD+K SN+L++ +K+ADFGL+ F N +R LT
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFV-NIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 280 SRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCG 339
V T WYRAPE+LLG+T Y GID+WS GC+L E+ G+PI PG + + QL RI +
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVID 248
Query: 340 SPSED 344
PS +
Sbjct: 249 FPSNE 253
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 165/300 (55%), Gaps = 25/300 (8%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALD-RDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
++ + Y+ + ++G+G Y V+KA D ++ G+ VALK+V+ T E RE+ +L+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 181 LD---HPNIVKLEGLAT---SRMQYSLYLVFEFMQTDLARIISN-PE-GKLTEPQ----- 227
L+ HPN+V+L + T + + L LVFE + DL + PE G TE
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWY 287
QLL GL H ++HRD+K N+L+ +G +K+ADFGLA +S + LTS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS--FQMALTSVVVTLWY 185
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWK 347
RAPE+LL ++ Y +DLWS GC+ AEMF +P+ G ++V+QL +I + G P E+ W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 348 KLRLSTTFRPPQSYKPRLFEAFSEF----PEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+ P Q++ + + +F E +PA R SA SAL + +F
Sbjct: 245 R----DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 155/294 (52%), Gaps = 21/294 (7%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF---MAREIMILQKLD- 182
Y+ + ++G G Y VYKA D +G VALK V+ RE+ +L++L+
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 183 --HPNIVKL-EGLATSRM--QYSLYLVFEFMQTDLARII--SNPEGKLTEP-----QQLL 230
HPN+V+L + ATSR + + LVFE + DL + + P G E +Q L
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 231 SGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
GL H I+HRD+K N+L+ G +K+ADFGLA +S + LT VVTLWYRAP
Sbjct: 131 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALTPVVVTLWYRAP 188
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW-KKL 349
E+LL +T Y +D+WS GC+ AEMF +P+ G +E +QL +IF L G P ED W + +
Sbjct: 189 EVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 247
Query: 350 RLSTTFRPPQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
L PP+ +P + E E +P R SA AL++ +
Sbjct: 248 SLPRGAFPPRGPRP-VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 165/300 (55%), Gaps = 25/300 (8%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALD-RDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
++ + Y+ + ++G+G Y V+KA D ++ G+ VALK+V+ T E RE+ +L+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 181 LD---HPNIVKLEGLAT---SRMQYSLYLVFEFMQTDLARIISN-PE-GKLTEPQ----- 227
L+ HPN+V+L + T + + L LVFE + DL + PE G TE
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWY 287
QLL GL H ++HRD+K N+L+ +G +K+ADFGLA +S + LTS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS--FQMALTSVVVTLWY 185
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWK 347
RAPE+LL ++ Y +DLWS GC+ AEMF +P+ G ++V+QL +I + G P E+ W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 348 KLRLSTTFRPPQSYKPRLFEAFSEF----PEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
+ P Q++ + + +F E +PA R SA SAL + +F
Sbjct: 245 R----DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 154/292 (52%), Gaps = 13/292 (4%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
+S E Y+ + VG+G+Y V K ++DTG+IVA+KK + K REI +L++L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQ----TDLARIISNPEGKLTEPQ--QLLSGLQH 235
H N+V L L + + YLVFEF+ DL + + ++ + Q+++G+
Sbjct: 82 RHENLVNL--LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGF 139
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH I+HRD+K N+L+ ++GV+K+ DFG A + + V T WYRAPELL+G
Sbjct: 140 CHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-VYDDEVATRWYRAPELLVG 198
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP---SEDYWKKLRLS 352
YG +D+W+ GCL+ EMF+G P+ PG ++++QL+ I G+ ++ + K +
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258
Query: 353 TTFRPPQSYKPRLFE-AFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
R P+ + E + + E DP R A L ++FF
Sbjct: 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 127/222 (57%), Gaps = 9/222 (4%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E Y+KI K+G+G+Y V+K +RDTG+IVA+KK +P K REI +L++L HP
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTE------PQQLLSGLQHCHD 238
N+V L L R + L+LVFE+ + + + + E Q L + CH
Sbjct: 63 NLVNL--LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+HRDVK N+LI K+ V+K+ DFG A + V T WYR+PELL+G T
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGS 340
YG +D+W+ GC+ AE+ G P+ PG+++V+QL+ I K G
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGD 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 108
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 226
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 287 NYTEFKFPQ 295
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 110
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 228
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 288
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 289 NYTEFKFPQ 297
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 112
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 230
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 290
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 291 NYTEFKFPQ 299
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 108
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 226
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 287 NYTEFKFPQ 295
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 153
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 271
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 331
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 332 NYTEFKFPQ 340
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 102
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 220
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 280
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 281 NYTEFKFPQ 289
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 86
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 204
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 264
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 265 NYTEFKFPQ 273
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 79
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 197
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 257
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 258 NYTEFKFPQ 266
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 82
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 200
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 260
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 261 NYTEFKFPQ 269
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 93
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 211
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 271
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 272 NYTEFKFPQ 280
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 86
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 204
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 264
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 265 NYTEFKFPQ 273
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 192
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 253 NYTEFKFPQ 261
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 87
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 205
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 265
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 266 NYTEFKFPQ 274
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 78
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 196
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 256
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 257 NYTEFKFPQ 265
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 75
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 193
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 253
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 254 NYTEFKFPQ 262
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 192
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 253 NYTEFKFPQ 261
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 192
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 253 NYTEFKFPQ 261
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 141/249 (56%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV D +F RE+ I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 186 IVKLEGLATSRMQ----YSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + L LV +++ + R+ + K T P QL
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 192
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 253 NYTEFKFPQ 261
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 151/289 (52%), Gaps = 29/289 (10%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA----REIMILQKLDHPNIVK 188
VG G Y +V A+D+ +G+ VA+KK+ S P + A RE+++L+ + H N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL----SRPFQSEIFAKRAYRELLLLKHMQHENVIG 87
Query: 189 LEGLATS----RMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
L + T R Y YLV FMQTDL +I+ K +E + Q+L GL++ H
Sbjct: 88 LLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHS 144
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G++HRD+K NL ++++ LKI DFGLA + +T VVT WYRAPE++L
Sbjct: 145 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMH 200
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR----LSTT 354
Y +D+WS GC++AEM G+ + G+ ++QL +I K+ G P ++ +KL S
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 260
Query: 355 FRPPQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
PQ+ + + F D R +AA AL + FF
Sbjct: 261 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 149/286 (52%), Gaps = 23/286 (8%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA----REIMILQKLDHPNIVK 188
VG G Y +V A+D+ +G+ VA+KK+ S P + A RE+++L+ + H N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL----SRPFQSEIFAKRAYRELLLLKHMQHENVIG 105
Query: 189 LEGLATS----RMQYSLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDRGI 241
L + T R Y YLV FMQTDL +I+ + E Q+L GL++ H G+
Sbjct: 106 LLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGV 165
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
+HRD+K NL ++++ LKI DFGLA + +T VVT WYRAPE++L Y
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQ 221
Query: 302 GIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR----LSTTFRP 357
+D+WS GC++AEM G+ + G+ ++QL +I K+ G P ++ +KL S
Sbjct: 222 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSL 281
Query: 358 PQSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
PQ+ + + F D R +AA AL + FF
Sbjct: 282 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 140/249 (56%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV F RE+ I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 192
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 352 S-TTFRPPQ 359
+ T F+ PQ
Sbjct: 253 NYTEFKFPQ 261
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 139/249 (55%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV F RE+ I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 192
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 352 S-TTFRPPQ 359
+ T F PQ
Sbjct: 253 NYTEFAFPQ 261
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 139/249 (55%), Gaps = 23/249 (9%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
SY +G G++ VY+A D+G++VA+KKV F RE+ I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISN-PEGKLTEP--------QQLLSG 232
IV+L S + + L LV +++ + R+ + K T P QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L + H GI HRD+K NLL+D + VLK+ DFG A + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 192
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
L+ GATDY ID+WSAGC+LAE+ LG+PI PG + V+QL I K+ G+P+ + +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 352 S-TTFRPPQ 359
+ T F PQ
Sbjct: 253 NYTEFAFPQ 261
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 154/297 (51%), Gaps = 20/297 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKLD 182
+ Y+ I+ +G G Y V A R TG+ VA+KK+ FD + K RE+ IL+
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT--NAKRTLRELKILKHFK 111
Query: 183 HPNIVKLEGLATSRMQY----SLYLVFEFMQTDLARIISNPEGKLTEP-----QQLLSGL 233
H NI+ ++ + + Y S+Y+V + M++DL +II + + E QLL GL
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGL 171
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRP-LTSRVVTLWYRAP 290
++ H ++HRD+K SNLL+++N LKI DFG+A SP + + +T V T WYRAP
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
EL+L +Y IDLWS GC+ EM R + PG+ V QL I + G+PS + +
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 291
Query: 351 LSTTFRPPQSYKPRLFEAF-SEFP---EXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
QS PR + + +P +P+ R SAA+AL++ F
Sbjct: 292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 134/231 (58%), Gaps = 25/231 (10%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V+ A+D D K VA+KK+ ++P SVK REI I+++LDH NI
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL--TDPQSVKHALREIKIIRRLDHDNI 70
Query: 187 VKL-EGLATSRMQY-----------SLYLVFEFMQTDLARIISNPEGKLTEPQ------Q 228
VK+ E L S Q S+Y+V E+M+TDLA ++ +G L E Q
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE--QGPLLEEHARLFMYQ 128
Query: 229 LLSGLQHCHDRGILHRDVKGSNLLID-KNGVLKIADFGLANYFSPN--KKRPLTSRVVTL 285
LL GL++ H +LHRD+K +NL I+ ++ VLKI DFGLA P+ K L+ +VT
Sbjct: 129 LLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
WYR+P LLL +Y ID+W+AGC+ AEM G+ + G E+EQ+ I +
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE 239
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 154/297 (51%), Gaps = 20/297 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKLD 182
+ Y+ I+ +G G Y V A R TG+ VA+KK+ FD + K RE+ IL+
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT--NAKRTLRELKILKHFK 112
Query: 183 HPNIVKLEGLATSRMQY----SLYLVFEFMQTDLARIISNPEGKLTEP-----QQLLSGL 233
H NI+ ++ + + Y S+Y+V + M++DL +II + + E QLL GL
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGL 172
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRP-LTSRVVTLWYRAP 290
++ H ++HRD+K SNLL+++N LKI DFG+A SP + + +T V T WYRAP
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
EL+L +Y IDLWS GC+ EM R + PG+ V QL I + G+PS + +
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 292
Query: 351 LSTTFRPPQSYKPRLFEAF-SEFP---EXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
QS PR + + +P +P+ R SAA+AL++ F
Sbjct: 293 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 128/229 (55%), Gaps = 14/229 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y ++ +G+G Y V A D VA+KK+ + + + + REI IL + H N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL-REIQILLRFRHENV 103
Query: 187 VKLEGL---ATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCH 237
+ + + +T +Y+V + M+TDL +++ + +L+ Q+L GL++ H
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS--QQLSNDHICYFLYQILRGLKYIH 161
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVTLWYRAPELLLG 295
+LHRD+K SNLLI+ LKI DFGLA P LT V T WYRAPE++L
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
+ Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 20 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 78
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 138
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 139 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 258
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 127/229 (55%), Gaps = 19/229 (8%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVK-FDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G Y V A + TG+IVA+KK++ FD +P REI IL+ H NI+ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFN 76
Query: 192 L--ATSRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ----QLLSGLQHCHDRGILHR 244
+ S ++ +Y++ E MQTDL R+IS Q Q L ++ H ++HR
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYF---SPNKKRP------LTSRVVTLWYRAPELLLG 295
D+K SNLLI+ N LK+ DFGLA + + P +T V T WYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLT 196
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
+ Y +D+WS GC+LAE+FL RPI PGR QL IF + G+P D
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 133/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ LA + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 6 RQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--AKLTDDHV 123
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 179
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 240 AELLKKI 246
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 32 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 90
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 150
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 17 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 75
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 18 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 76
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 136
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 137 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 256
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 9 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 67
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 127
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 128 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 247
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 127/229 (55%), Gaps = 19/229 (8%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVK-FDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G Y V A + TG+IVA+KK++ FD +P REI IL+ H NI+ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFN 76
Query: 192 L--ATSRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ----QLLSGLQHCHDRGILHR 244
+ S ++ +Y++ E MQTDL R+IS Q Q L ++ H ++HR
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYF---SPNKKRP------LTSRVVTLWYRAPELLLG 295
D+K SNLLI+ N LK+ DFGLA + + P +T V T WYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLT 196
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
+ Y +D+WS GC+LAE+FL RPI PGR QL IF + G+P D
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 10 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 68
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 248
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 128/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 130/240 (54%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIIS----NPEGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ + +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL 134
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL-R 74
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 133/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L A Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 128/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA++K+ + + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL-R 74
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 10 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 68
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSP ++
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQE 248
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ L V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 17 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 75
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +Y+V + M+TDL +++ +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ L V T
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 16 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 75
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 133
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 189
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 250 AELLKKI 256
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 126/229 (55%), Gaps = 19/229 (8%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVK-FDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G Y V A + TG+IVA+KK++ FD +P REI IL+ H NI+ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFN 76
Query: 192 L--ATSRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ----QLLSGLQHCHDRGILHR 244
+ S ++ +Y++ E MQTDL R+IS Q Q L ++ H ++HR
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYF---SPNKKRP------LTSRVVTLWYRAPELLLG 295
D+K SNLLI+ N LK+ DFGLA + + P + V T WYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT 196
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
+ Y +D+WS GC+LAE+FL RPI PGR QL IF + G+P D
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 12 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 129
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARH----TDDEMTGYV 185
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 246 AELLKKI 252
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 29 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 88
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 146
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 202
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 263 AELLKKI 269
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 30 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 89
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 147
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 203
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 264 AELLKKI 270
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 133/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 17 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 134
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + + +T V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYV 190
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 251 AELLKKI 257
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 16 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 133
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARH----TDDEMTGYV 189
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 250 AELLKKI 256
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 126/240 (52%), Gaps = 10/240 (4%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E++ G V Y + +G+G Y V A D VA+KK+ + + + + R
Sbjct: 32 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 90
Query: 174 EIMILQKLDHPNIVKLEGLA---TSRMQYSLYLVFEFMQTDLARIISNP----EGKLTEP 226
EI IL + H NI+ + + T +YLV M DL +++ +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 150
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVVT 284
Q+L GL++ H +LHRD+K SNLL++ LKI DFGLA P+ LT V T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
WYRAPE++L + Y ID+WS GC+LAEM RPI PG+ ++QL+ I + GSPS++
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 133/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 17 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 134
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + + +T V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYV 190
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 251 AELLKKI 257
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 133/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 17 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 134
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + + +T V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYV 190
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 251 AELLKKI 257
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 16 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 133
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 189
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 250 AELLKKI 256
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 6 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 123
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 179
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 240 AELLKKI 246
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 21 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 80
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 138
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 194
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 255 AELLKKI 261
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 16 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 133
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 189
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 250 AELLKKI 256
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 22 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 81
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 139
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 195
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 256 AELLKKI 262
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 22 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 81
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 139
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 195
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 256 AELLKKI 262
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 12 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 129
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 185
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 246 AELLKKI 252
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 21 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 80
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 138
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH----TDDEMTGYV 194
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 255 AELLKKI 261
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 20 RQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 79
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 137
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 138 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 193
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 253
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 254 AELLKKI 260
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 12 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 129
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 185
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 246 AELLKKI 252
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 22 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY 81
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 139
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 195
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 256 AELLKKI 262
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 29 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 88
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 146
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 202
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 263 AELLKKI 269
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGXV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 17 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 134
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 190
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 251 AELLKKI 257
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 15 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 132
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 188
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 249 AELLKKI 255
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 9 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 68
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 126
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 127 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 182
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 242
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 243 AELLKKI 249
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 12 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 129
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 185
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 246 AELLKKI 252
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 33 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 92
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 150
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 206
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 267 AELLKKI 273
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 15 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 132
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH----TDDEMTGYV 188
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 249 AELLKKI 255
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ + KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKS--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGL + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 30 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 89
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 147
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 203
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 264 AELLKKI 270
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 7 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 66
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 124
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 180
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 241 AELLKKI 247
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 7 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 66
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 124
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 180
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 241 AELLKKI 247
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 6 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 65
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 123
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 179
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 240 AELLKKI 246
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 15 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 132
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 188
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 249 AELLKKI 255
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 8 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 67
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 125
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 126 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 181
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 241
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 242 AELLKKI 248
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + +G G Y +V A D TG VA+KK+ K
Sbjct: 15 RQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 132
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH----TDDEMTGYV 188
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 249 AELLKKI 255
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 130/239 (54%), Gaps = 16/239 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V + D +G +A+KK+ K
Sbjct: 39 RQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY 98
Query: 173 REIMILQKLDHPNIVKLEGL---ATSRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + ATS +++ +YLV M DL I+ KLT+
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 156
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + +T V
Sbjct: 157 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYV 212
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP 341
T WYRAPE++L Y + +D+WS GC++AE+ GR + PG + QL +I +L G+P
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTP 271
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 30 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 89
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 147
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + + V
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMXGXV 203
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 264 AELLKKI 270
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMAGFV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI D+GLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMAGFV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 33 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 92
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 150
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + + V
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMXGYV 206
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 267 AELLKKI 273
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 6 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 123
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DFGLA + + V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMAGFV 179
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 240 AELLKKI 246
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI DF Y + + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF----YLARHTDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI FGLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI D GLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI D GLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 113 REVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA 172
R+ L + + E Y + VG G Y +V A D TG VA+KK+ K
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 173 REIMILQKLDHPNIVKLEGLAT---SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ- 227
RE+ +L+ + H N++ L + T S +++ +YLV M DL I+ KLT+
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 228 -----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV 282
Q+L GL++ H I+HRD+K SNL ++++ LKI D GLA + +T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARH----TDDEMTGYV 183
Query: 283 VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPS 342
T WYRAPE++L Y +D+WS GC++AE+ GR + PG ++QL I +L G+P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 343 EDYWKKL 349
+ KK+
Sbjct: 244 AELLKKI 250
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 125/234 (53%), Gaps = 16/234 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + VG G Y V A+D TG VA+KK+ K RE+ +L+ + H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 187 VKLEGLATSRMQYS----LYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHC 236
+ L + T YLV FM TDL +++ + KL E + Q+L GL++
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYI 144
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H GI+HRD+K NL ++++ LKI DFGLA + VVT WYRAPE++L
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLAR----QADSEMXGXVVTRWYRAPEVILNW 200
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
Y +D+WS GC++AEM G+ + G ++QL I K+ G+P ++ ++L+
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 138/284 (48%), Gaps = 18/284 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGL 192
VG G Y +V A D + VA+KK+ + RE+ +L+ L H N++ L +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 193 ---ATSRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ----QLLSGLQHCHDRGILHR 244
ATS +S +YLV M DL I+ + Q QLL GL++ H GI+HR
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHR 155
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGID 304
D+K SN+ ++++ L+I DFGLA +T V T WYRAPE++L Y +D
Sbjct: 156 DLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 305 LWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL-----RLSTTFRPPQ 359
+WS GC++AE+ G+ + PG ++QL RI ++ G+PS + K+ R PP
Sbjct: 212 IWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPM 271
Query: 360 SYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
K L F D R SAA AL + +F
Sbjct: 272 PQKD-LSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 137/284 (48%), Gaps = 18/284 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGL 192
VG G Y +V A D + VA+KK+ + RE+ +L+ L H N++ L +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 193 ---ATSRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ----QLLSGLQHCHDRGILHR 244
ATS +S +YLV M DL I+ Q QLL GL++ H GI+HR
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHR 155
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGID 304
D+K SN+ ++++ L+I DFGLA +T V T WYRAPE++L Y +D
Sbjct: 156 DLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 305 LWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL-----RLSTTFRPPQ 359
+WS GC++AE+ G+ + PG ++QL RI ++ G+PS + K+ R PP
Sbjct: 212 IWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPM 271
Query: 360 SYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
K L F D R SAA AL + +F
Sbjct: 272 PQKD-LSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 132/239 (55%), Gaps = 25/239 (10%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+Y +G G++ V++A ++ + VA+KKV D +F RE+ I++ + HPN
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK------RFKNRELQIMRIVKHPN 93
Query: 186 IVKLEGLATS----RMQYSLYLVFEFMQTDLARIISNPEGKL--TEPQ--------QLLS 231
+V L+ S + + L LV E++ + R S KL T P QLL
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRA-SRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK-NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
L + H GI HRD+K NLL+D +GVLK+ DFG A + P S + + +YRAP
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRYYRAP 210
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL 349
EL+ GAT+Y ID+WS GC++AE+ G+P+ PG + ++QL I K+ G+PS + K +
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 137/284 (48%), Gaps = 18/284 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGL 192
VG G Y +V A D + VA+KK+ + RE+ +L+ L H N++ L +
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 193 ---ATSRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ----QLLSGLQHCHDRGILHR 244
ATS +S +YLV M DL I+ Q QLL GL++ H GI+HR
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHR 147
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGID 304
D+K SN+ ++++ L+I DFGLA +T V T WYRAPE++L Y +D
Sbjct: 148 DLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVD 203
Query: 305 LWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL-----RLSTTFRPPQ 359
+WS GC++AE+ G+ + PG ++QL RI ++ G+PS + K+ R PP
Sbjct: 204 IWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPM 263
Query: 360 SYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
K L F D R SAA AL + +F
Sbjct: 264 PQKD-LSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 323 VWYDPAEVE-APPPQIYDKQ 341
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 183
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 240
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 361 VWYDPAEVE-APPPQIYDKQ 379
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 146
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 203
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 324 VWYDPAEVE-APPPQIYDKQ 342
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 121/241 (50%), Gaps = 28/241 (11%)
Query: 134 GQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL---DHPNIVKLE 190
GQGT+ V ++ TG VA+KKV D +F RE+ I+Q L HPNIV+L+
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDP------RFRNRELQIMQDLAVLHHPNIVQLQ 85
Query: 191 GLATS-----RMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS-----------GLQ 234
+ R L +V E++ L R N + P +L G
Sbjct: 86 SYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCL 145
Query: 235 HCHDRGILHRDVKGSNLLIDK-NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
H + HRD+K N+L+++ +G LK+ DFG A SP++ P + + + +YRAPEL+
Sbjct: 146 HLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELI 203
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLST 353
G Y +D+WS GC+ AEM LG PI G QLH I ++ G PS + +KL S
Sbjct: 204 FGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSH 263
Query: 354 T 354
T
Sbjct: 264 T 264
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 144
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 145 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 201
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 202 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 261
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 262 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 322 VWYDPAEVE-APPPQIYDKQ 340
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 323 VWYDPAEVE-APPPQIYDKQ 341
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 183
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 240
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 361 VWYDPAEVE-APPPQIYDKQ 379
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 323 VWYDPAEVE-APPPQIYDKQ 341
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 162/341 (47%), Gaps = 50/341 (14%)
Query: 132 KVGQGTYSNVYKALDRDTGKI--VALKKVKFDTSEPHSVKFMA-REIMILQKLDHPNIVK 188
KVG+GTY +VYKA +D ALK++ E + A REI +L++L HPN++
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQI-----EGTGISMSACREIALLRELKHPNVIS 82
Query: 189 LEGLATSRMQYSLYLVFEFMQTDLARIISN-------------PEGKL-TEPQQLLSGLQ 234
L+ + S ++L+F++ + DL II P G + + Q+L G+
Sbjct: 83 LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 235 HCHDRGILHRDVKGSNLLI----DKNGVLKIADFGLANYF-SPNKKRP-LTSRVVTLWYR 288
+ H +LHRD+K +N+L+ + G +KIAD G A F SP K L VVT WYR
Sbjct: 143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYR 202
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTE---------VEQLHRIFKLCG 339
APELLLGA Y ID+W+ GC+ AE+ PI R E +QL RIF + G
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262
Query: 340 SPSEDYWKKLR-------LSTTFRPPQSYKPRLFEAFSEF---PEXXX-XXXXXXXXXDP 388
P++ W+ ++ L FR L + + P+ DP
Sbjct: 263 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDP 322
Query: 389 AYRGSAASALKNEFFFTSPLACD--LSGLPVIYDKEDELIE 427
R ++ A+++ +F PL +G + Y K + L E
Sbjct: 323 IKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTE 363
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 138
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 139 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 195
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 316 VWYDPAEVE-APPPQIYDKQ 334
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 139
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 196
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 317 VWYDPAEVE-APPPQIYDKQ 335
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 146
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 203
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 324 VWYDPAEVE-APPPQIYDKQ 342
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 139
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 196
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 317 VWYDPAEVE-APPPQIYDKQ 335
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 323 VWYDPAEVE-APPPQIYDKQ 341
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 146/299 (48%), Gaps = 25/299 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 138
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 139 GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 195
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF- 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 404 -FTSPLACDLSGLPVIYDKE 422
+ P + + P IYDK+
Sbjct: 316 VWYDPAEVE-APPPQIYDKQ 334
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 146/299 (48%), Gaps = 25/299 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL----RLSTTF 355
+D+WS GC++ EM + + PGR ++Q +++ + G+P ++ KKL R
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 356 RP-------PQSYKPRLFEAFSEFPEXXXXXX----XXXXXXDPAYRGSAASALKNEFF 403
RP P+ + LF A SE + DPA R S AL++ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 126/231 (54%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L+++I + E Q+L G++H H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ EM G + PG ++Q +++ + G+PS ++ KKL+
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 126/231 (54%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L+++I + E Q+L G++H H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ EM G + PG ++Q +++ + G+PS ++ KKL+
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 126/231 (54%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L+++I + E Q+L G++H H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ EM G + PG ++Q +++ + G+PS ++ KKL+
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 125/231 (54%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L ++I + E Q+L G++H H
Sbjct: 91 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 150
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 151 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 207
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+DLWS GC++ EM + + PGR ++Q +++ + G+P ++ KKL+
Sbjct: 208 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 258
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 125/231 (54%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L ++I + E Q+L G++H H
Sbjct: 80 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 139
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 196
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+DLWS GC++ EM + + PGR ++Q +++ + G+P ++ KKL+
Sbjct: 197 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 247
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 126/231 (54%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L+++I + E Q+L G++H H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ EM G + PG ++Q +++ + G+PS ++ KKL+
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 125/231 (54%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L ++I + E Q+L G++H H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ EM G + PG ++Q +++ + G+PS ++ KKL+
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 124/231 (53%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y ++ +G G V A D G VA+KK+ K RE+++L+ ++H NI
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA 143
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA S N +T VVT +YRAPE++LG Y
Sbjct: 144 GIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM--MTPYVVTRYYRAPEVILG-MGY 200
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ E+ G I G ++Q +++ + G+PS ++ L+
Sbjct: 201 KENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ 251
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 123/231 (53%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y ++ +G G V A D G VA+KK+ K RE+++L+ ++H NI
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +YLV E M +L ++I + E Q+L G++H H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA N +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ E+ G I G ++Q +++ + G+PS ++ L+
Sbjct: 203 AANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ 253
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L ++I + E Q+L G++H H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ EM G + PG ++Q +++ + G+P ++ KKL+
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 139/298 (46%), Gaps = 68/298 (22%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGL 192
+G+G+Y VY A D++T K VA+KKV + K + REI IL +L I++L L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 193 AT--SRMQYS-LYLVFEFMQTDLARIISNP-----EGKLTEPQQLLSGLQHCHDRGILHR 244
+++ LY+V E +DL ++ P E T LL G H+ GI+HR
Sbjct: 94 IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHR 153
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNK---------------------KRPLTSRVV 283
D+K +N L++++ +K+ DFGLA + K K+ LTS VV
Sbjct: 154 DLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV 213
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF----------LGR-PIMPG-------- 324
T WYRAPEL+L +Y ID+WS GC+ AE+ R P+ PG
Sbjct: 214 TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSP 273
Query: 325 ---------RTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRPPQSYKPRLFEAFSEFP 373
++ +QL+ IF + G+P+ED K + KP + + FP
Sbjct: 274 DRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNIN-----------KPEVIKYIKLFP 320
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L ++I + E Q+L G++H H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + + VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+DLWS GC++ EM + + PGR ++Q +++ + G+P ++ KKL+
Sbjct: 203 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L ++I + E Q+L G++H H
Sbjct: 87 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 146
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 203
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ EM G + PG ++Q +++ + G+P ++ KKL+
Sbjct: 204 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L ++I + E Q+L G++H H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ EM G + PG ++Q +++ + G+P ++ KKL+
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L+++I + E Q+L G++H H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS G ++ EM G + PG ++Q +++ + G+PS ++ KKL+
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 123/231 (53%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L ++I + E Q+L G++H H
Sbjct: 88 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 147
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + + VVT +YRAPE++LG Y
Sbjct: 148 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVILG-MGY 204
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ EM G + PG ++Q +++ + G+P ++ KKL+
Sbjct: 205 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 255
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 123/231 (53%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L ++I + E Q+L G++H H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + + VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS GC++ EM + + PGR ++Q +++ + G+P + KKL+
Sbjct: 203 KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQ 253
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 10/231 (4%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +G G V A D + VA+KK+ K RE+++++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 187 VKLEGLATSRMQY----SLYLVFEFMQTDLARIIS---NPEGKLTEPQQLLSGLQHCHDR 239
+ L + T + +Y+V E M +L+++I + E Q+L G++H H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA 145
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
GI+HRD+K SN+++ + LKI DFGLA + +T VVT +YRAPE++LG Y
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGY 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
+D+WS G ++ EM G + PG ++Q +++ + G+PS ++ KKL+
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 134/278 (48%), Gaps = 67/278 (24%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGL 192
+G G+Y +V +A D+ ++VA+KK+ + K + REI IL +L+H ++VK+ +
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 193 ATSRMQY---SLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILH 243
+ LY+V E +D ++ P LTE LL G+++ H GILH
Sbjct: 121 VIPKDVEKFDELYVVLEIADSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSAGILH 179
Query: 244 RDVKGSNLLIDKNGVLKIADFGLA---NY---------FSP--------------NKKRP 277
RD+K +N L++++ +K+ DFGLA +Y SP N KR
Sbjct: 180 RDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQ 239
Query: 278 LTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF----------LGR-PIMPG-- 324
LT VVT WYRAPEL+L +Y ID+WS GC+ AE+ R P+ PG
Sbjct: 240 LTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSS 299
Query: 325 ------------------RTEVEQLHRIFKLCGSPSED 344
R +QL+ IF + G+PSE+
Sbjct: 300 CFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEE 337
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 136/284 (47%), Gaps = 62/284 (21%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
K ++Y+ +G+G+Y VY A D++ K VA+KKV + K + REI IL +L
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 182 DHPNIVKLEGLAT--SRMQYS-LYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSG 232
I++L L +++ LY+V E +DL ++ P LTE LL G
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF-LTEQHVKTILYNLLLG 143
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK------------------ 274
+ H+ GI+HRD+K +N L++++ +KI DFGLA + +K
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 275 ------KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGR--------- 319
K+ LTS VVT WYRAPEL+L +Y ID+WS GC+ AE+
Sbjct: 204 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTN 263
Query: 320 --PIMPG-----------------RTEVEQLHRIFKLCGSPSED 344
P+ PG ++ +QL+ IF + G+P E+
Sbjct: 264 RFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEE 307
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 54/268 (20%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S++ Y +G G++ V + D ++GK ALKKV D ++ RE+ I++ LD
Sbjct: 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP------RYKNRELDIMKVLD 58
Query: 183 HPNIVKL------------------------------------EGLATSRMQYSLYLVFE 206
H NI+KL + L ++ E
Sbjct: 59 HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118
Query: 207 FMQTDLARII--------SNPEGKLT-EPQQLLSGLQHCHDRGILHRDVKGSNLLID-KN 256
++ L +++ S P ++ QL + H GI HRD+K NLL++ K+
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD 178
Query: 257 GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
LK+ DFG A P++ P + + + +YRAPEL+LGAT+Y IDLWS GC+ E+
Sbjct: 179 NTLKLCDFGSAKKLIPSE--PSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236
Query: 317 LGRPIMPGRTEVEQLHRIFKLCGSPSED 344
LG+P+ G T ++QL RI ++ G+P+++
Sbjct: 237 LGKPLFSGETSIDQLVRIIQIMGTPTKE 264
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA---------REIMILQKLDH 183
+ G+Y V +D + G VA+K+V S+ +V ++ REI +L H
Sbjct: 30 ISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 184 PNIVKLEGLATSRMQ---YSLYLVFEFMQTDLARIISNPEGKLTEPQQL-------LSGL 233
PNI+ L + + + LYLV E M+TDLA++I + + + PQ + L GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD-QRIVISPQHIQYFMYHILLGL 147
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA--NYFSPNKKRPLTSRVVTLWYRAPE 291
H+ G++HRD+ N+L+ N + I DF LA + NK +T R WYRAPE
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR----WYRAPE 203
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP 341
L++ + +D+WSAGC++AEMF + + G T QL++I ++ G+P
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA---------REIMILQKLDH 183
+ G+Y V +D + G VA+K+V S+ +V ++ REI +L H
Sbjct: 30 ISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 184 PNIVKLEGLATSRMQ---YSLYLVFEFMQTDLARIISNPEGKLTEPQQL-------LSGL 233
PNI+ L + + + LYLV E M+TDLA++I + + + PQ + L GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD-QRIVISPQHIQYFMYHILLGL 147
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA--NYFSPNKKRPLTSRVVTLWYRAPE 291
H+ G++HRD+ N+L+ N + I DF LA + NK +T R WYRAPE
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR----WYRAPE 203
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP 341
L++ + +D+WSAGC++AEMF + + G T QL++I ++ G+P
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 37/231 (16%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
AE Y+ + +G+G++ V K DR T + A+K + +++ + RE+ +L+KLDH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 184 PNIVKL-EGLATSRMQYSLYLVFE----------------FMQTDLARIISNPEGKLTEP 226
PNI+KL E L S S Y+V E F + D ARII
Sbjct: 81 PNIMKLFEILEDSS---SFYIVGELYTGGELFDEIIKRKRFSEHDAARII---------- 127
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVV 283
+Q+ SG+ + H I+HRD+K N+L+ +K+ +KI DFGL+ F N K + R+
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRIG 185
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
T +Y APE+L G Y D+WSAG +L + G P G+ E + L R+
Sbjct: 186 TAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ + V +K +K P + REI IL+ L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK-----PVKKNKIKREIKILENLRGG 91
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYM-YEILKALDYCHSM 150
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 208
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 37/231 (16%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
AE Y+ + +G+G++ V K DR T + A+K + +++ + RE+ +L+KLDH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 184 PNIVKL-EGLATSRMQYSLYLVFE----------------FMQTDLARIISNPEGKLTEP 226
PNI+KL E L S S Y+V E F + D ARII
Sbjct: 81 PNIMKLFEILEDSS---SFYIVGELYTGGELFDEIIKRKRFSEHDAARII---------- 127
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVV 283
+Q+ SG+ + H I+HRD+K N+L+ +K+ +KI DFGL+ F N K + R+
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRIG 185
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
T +Y APE+L G Y D+WSAG +L + G P G+ E + L R+
Sbjct: 186 TAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 37/231 (16%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
AE Y+ + +G+G++ V K DR T + A+K + +++ + RE+ +L+KLDH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 184 PNIVKL-EGLATSRMQYSLYLVFE----------------FMQTDLARIISNPEGKLTEP 226
PNI+KL E L S S Y+V E F + D ARII
Sbjct: 81 PNIMKLFEILEDSS---SFYIVGELYTGGELFDEIIKRKRFSEHDAARII---------- 127
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVV 283
+Q+ SG+ + H I+HRD+K N+L+ +K+ +KI DFGL+ F N K + R+
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRIG 185
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
T +Y APE+L G Y D+WSAG +L + G P G+ E + L R+
Sbjct: 186 TAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 123/234 (52%), Gaps = 19/234 (8%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVK-FDTSEPHSVKFMAREIMILQKLDHPNIVKLE 190
K+G+G +S VY+A G VALKKV+ FD + + +EI +L++L+HPN++K
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY- 97
Query: 191 GLATSRMQYSLYLVFEFMQT-DLARIISN--------PEGKLTEP-QQLLSGLQHCHDRG 240
A+ L +V E DL+R+I + PE + + QL S L+H H R
Sbjct: 98 -YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR 156
Query: 241 ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYG 300
++HRD+K +N+ I GV+K+ D GL +FS +K S V T +Y +PE + Y
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPE-RIHENGYN 214
Query: 301 VGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS---PSEDYWKKLR 350
D+WS GCLL EM L P + + L + + C PS+ Y ++LR
Sbjct: 215 FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 268
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 113/211 (53%), Gaps = 12/211 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL-EG 191
+G+G ++ V A TG+ VA+K + P S++ + RE+ I++ L+HPNIVKL E
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 192 LATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRD 245
+ T + +LYLV E+ G++ E + Q++S +Q+CH + I+HRD
Sbjct: 83 IETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRD 139
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+D + +KIADFG +N F+ K L + + Y APEL G G +D+
Sbjct: 140 LKAENLLLDGDMNIKIADFGFSNEFTVGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDV 197
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
WS G +L + G G+ E R+ +
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKELRERVLR 228
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 116/218 (53%), Gaps = 12/218 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+Y + +G+G ++ V A TG+ VA+K + P S++ + RE+ I++ L+HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 186 IVKL-EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
IVKL E + T + +LYL+ E+ G++ E + Q++S +Q+CH
Sbjct: 73 IVKLFEVIETEK---TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+ I+HRD+K NLL+D + +KIADFG +N F+ K L + + Y APEL G
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDTFCGSPPYAAPELFQGKKY 187
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
G +D+WS G +L + G G+ E R+ +
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 225
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 12/218 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+Y + +G+G ++ V A TG+ VA+K + P S++ + RE+ I++ L+HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 186 IVKL-EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
IVKL E + T + +LYL+ E+ G++ E + Q++S +Q+CH
Sbjct: 76 IVKLFEVIETEK---TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+ I+HRD+K NLL+D + +KIADFG +N F+ K L + Y APEL G
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPELFQGKKY 190
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
G +D+WS G +L + G G+ E R+ +
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 228
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 157/328 (47%), Gaps = 47/328 (14%)
Query: 119 LVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMIL 178
L + E +D ++K+G+G+Y +VYKA+ ++TG+IVA+K+V ++ ++ + +EI I+
Sbjct: 23 LTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIM 78
Query: 179 QKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLS 231
Q+ D P++VK G + L++V E+ ++ II LTE Q L
Sbjct: 79 QQCDSPHVVKYYG--SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLK 136
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
GL++ H +HRD+K N+L++ G K+ADFG+A + + + T ++ APE
Sbjct: 137 GLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPE 195
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRL 351
++ Y D+WS G EM G+ P ++ + IF + +P
Sbjct: 196 -VIQEIGYNCVADIWSLGITAIEMAEGK---PPYADIHPMRAIFMIPTNP---------- 241
Query: 352 STTFRPPQSYKPRLF-EAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFFFTSPLAC 410
PP KP L+ + F++F P R +A L++ F ++
Sbjct: 242 -----PPTFRKPELWSDNFTDF-------VKQCLVKSPEQRATATQLLQHPFVRSA---- 285
Query: 411 DLSGLPVIYDKEDELIEANQQRKIRRAR 438
G+ ++ D +E ++ +R+ + R
Sbjct: 286 --KGVSILRDLINEAMDVKLKRQESQQR 311
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 115/218 (52%), Gaps = 12/218 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+Y + +G+G ++ V A TGK VA+K + S++ + RE+ I++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 186 IVKL-EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
IVKL E + T + +LYLV E+ G++ E + Q++S +Q+CH
Sbjct: 75 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+ I+HRD+K NLL+D + +KIADFG +N F+ K L + + Y APEL G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKY 189
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
G +D+WS G +L + G G+ E R+ +
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 115/218 (52%), Gaps = 12/218 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+Y + +G+G ++ V A TGK VA+K + S++ + RE+ I++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 186 IVKL-EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
IVKL E + T + +LYLV E+ G++ E + Q++S +Q+CH
Sbjct: 75 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+ I+HRD+K NLL+D + +KIADFG +N F+ K L + + Y APEL G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKY 189
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
G +D+WS G +L + G G+ E R+ +
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 22/254 (8%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-- 181
A Y+ + +G+G++ V KA D + VALK V+ +E + A EI IL+ L
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRK 152
Query: 182 -DHPNIVK-LEGLATSRMQYSLYLVFEFMQTDLARIIS-NPEGKLTEP------QQLLSG 232
D N + + L + + + FE + +L +I N + P +L
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGV--LKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
L H I+H D+K N+L+ + G +K+ DFG + Y + + + + + + +YRAP
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYTXIQSRFYRAP 268
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
E++LGA YG+ ID+WS GC+LAE+ G P++PG E +QL + +L G PS+ +
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASK 327
Query: 351 LSTTFRPPQSYKPR 364
+ F + Y PR
Sbjct: 328 RAKNFVSXKGY-PR 340
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 22/254 (8%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-- 181
A Y+ + +G+G++ V KA D + VALK V+ +E + A EI IL+ L
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRK 152
Query: 182 -DHPNIVK-LEGLATSRMQYSLYLVFEFMQTDLARIIS-NPEGKLTEP------QQLLSG 232
D N + + L + + + FE + +L +I N + P +L
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGV--LKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
L H I+H D+K N+L+ + G +K+ DFG + Y + + + + + + +YRAP
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYTXIQSRFYRAP 268
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
E++LGA YG+ ID+WS GC+LAE+ G P++PG E +QL + +L G PS+ +
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASK 327
Query: 351 LSTTFRPPQSYKPR 364
+ F + Y PR
Sbjct: 328 RAKNFVSXKGY-PR 340
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 12/218 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+Y + +G+G ++ V A TGK VA+K + S++ + RE+ I++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 186 IVKL-EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
IVKL E + T + +LYLV E+ G++ E + Q++S +Q+CH
Sbjct: 75 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+ I+HRD+K NLL+D + +KIADFG +N F+ K L + Y APEL G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKKY 189
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
G +D+WS G +L + G G+ E R+ +
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
+E Y ++ K+G G Y V D+ T A+K ++ + S + E+ +L+ LDH
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 184 PNIVKLEGLATSRMQYSLYLVF------EFMQTDLARIISNPEGKLTEPQQLLSGLQHCH 237
PNI+KL + Y YLV E + R+ N +Q+LSG+ + H
Sbjct: 96 PNIMKLYDFFEDKRNY--YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH 153
Query: 238 DRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL 294
I+HRD+K NLL+ +K+ ++KI DFGL+ F KK + R+ T +Y APE+L
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK--MKERLGTAYYIAPEVL- 210
Query: 295 GATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
Y D+WS G +L + G P G+T+ E L ++ K
Sbjct: 211 -RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK 251
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 12/218 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+Y + +G+G ++ V A TGK VA++ + S++ + RE+ I++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 186 IVKL-EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
IVKL E + T + +LYLV E+ G++ E + Q++S +Q+CH
Sbjct: 75 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+ I+HRD+K NLL+D + +KIADFG +N F+ K L + + Y APEL G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKY 189
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
G +D+WS G +L + G G+ E R+ +
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 12/218 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+Y + +G+G ++ V A TGK VA++ + S++ + RE+ I++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 186 IVKL-EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
IVKL E + T + +LYLV E+ G++ E + Q++S +Q+CH
Sbjct: 75 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+ I+HRD+K NLL+D + +KIADFG +N F+ K L + Y APEL G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPELFQGKKY 189
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
G +D+WS G +L + G G+ E R+ +
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 12/218 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+Y + +G+G ++ V A TGK VA+K + S++ + RE+ I++ L+HPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 186 IVKL-EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
IVKL E + T + +LYLV E+ G + E + Q++S +Q+CH
Sbjct: 68 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+ I+HRD+K NLL+D + +KIADFG +N F+ K L + + Y APEL G
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKY 182
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
G +D+WS G +L + G G+ E R+ +
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 220
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 22/254 (8%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-- 181
A Y+ + +G+G + V KA D + VALK V+ +E + A EI IL+ L
Sbjct: 96 AYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRK 152
Query: 182 -DHPNIVK-LEGLATSRMQYSLYLVFEFMQTDLARIIS-NPEGKLTEP------QQLLSG 232
D N + + L + + + FE + +L +I N + P +L
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGV--LKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
L H I+H D+K N+L+ + G +K+ DFG + Y + SR +YRAP
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSR----FYRAP 268
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
E++LGA YG+ ID+WS GC+LAE+ G P++PG E +QL + +L G P + +
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASK 327
Query: 351 LSTTFRPPQSYKPR 364
+ F + Y PR
Sbjct: 328 RAKNFVSXKGY-PR 340
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 12/218 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+Y + +G+G ++ V A TGK VA+K + S++ + RE+ I + L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 186 IVKL-EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
IVKL E + T + +LYLV E+ G+ E + Q++S +Q+CH
Sbjct: 75 IVKLFEVIETEK---TLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+ I+HRD+K NLL+D + +KIADFG +N F+ K L + Y APEL G
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKKY 189
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
G +D+WS G +L + G G+ E R+ +
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH- 183
+ Y+ + KVG+G YS V++ ++ + + K +P K + REI ILQ L
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 106
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-----------QLLSG 232
PNIVKL + + + L+FE+ ++N + K+ P +LL
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEY--------VNNTDFKVLYPTLTDYDIRYYIYELLKA 158
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L +CH +GI+HRDVK N++ID L++ D+GLA ++ P K+ RV + +++ PE
Sbjct: 159 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPE 216
Query: 292 LLLGATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
LL+ DY +D+WS GC+ A M F P G +QL +I K+ G+
Sbjct: 217 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 266
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH- 183
+ Y+ + KVG+G YS V++ ++ + + K +P K + REI ILQ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 86
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-----------QLLSG 232
PNIVKL + + + L+FE+ ++N + K+ P +LL
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEY--------VNNTDFKVLYPTLTDYDIRYYIYELLKA 138
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L +CH +GI+HRDVK N++ID L++ D+GLA ++ P K+ RV + +++ PE
Sbjct: 139 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPE 196
Query: 292 LLLGATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
LL+ DY +D+WS GC+ A M F P G +QL +I K+ G+
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH- 183
+ Y+ + KVG+G YS V++ ++ + + K +P K + REI ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-----------QLLSG 232
PNIVKL + + + L+FE+ ++N + K+ P +LL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY--------VNNTDFKVLYPTLTDYDIRYYIYELLKA 137
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L +CH +GI+HRDVK N++ID L++ D+GLA ++ P K+ RV + +++ PE
Sbjct: 138 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPE 195
Query: 292 LLLGATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
LL+ DY +D+WS GC+ A M F P G +QL +I K+ G+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHS-VKFMAREIMILQKLD 182
++ Y ++ K+G G Y V D+ TG A+K +K + S + E+ +L++LD
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 183 HPNIVKLEGLATSRMQYSLYLVFE-------FMQTDLARIISNPEGKLTEPQQLLSGLQH 235
HPNI+KL + Y YLV E F + L + S + + +Q+LSG +
Sbjct: 80 HPNIMKLYEFFEDKRNY--YLVMEVYRGGELFDEIILRQKFSEVDAAVI-MKQVLSGTTY 136
Query: 236 CHDRGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
H I+HRD+K NLL++ ++ ++KI DFGL+ +F K + R+ T +Y APE+
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLGTAYYIAPEV 194
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
L Y D+WS G +L + G P G+T+ E L R+ K
Sbjct: 195 L--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 236
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHS-VKFMAREIMILQKLD 182
++ Y ++ K+G G Y V D+ TG A+K +K + S + E+ +L++LD
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 183 HPNIVKLEGLATSRMQYSLYLVFE-------FMQTDLARIISNPEGKLTEPQQLLSGLQH 235
HPNI+KL + Y YLV E F + L + S + + +Q+LSG +
Sbjct: 63 HPNIMKLYEFFEDKRNY--YLVMEVYRGGELFDEIILRQKFSEVDAAVI-MKQVLSGTTY 119
Query: 236 CHDRGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
H I+HRD+K NLL++ ++ ++KI DFGL+ +F K + R+ T +Y APE+
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLGTAYYIAPEV 177
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
L Y D+WS G +L + G P G+T+ E L R+ K
Sbjct: 178 L--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 219
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y+ + KVG+G YS V++ ++ + + K +P K + REI ILQ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 86
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-----------QLLSG 232
PNIVKL + + + L+FE+ ++N + K+ P +LL
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEY--------VNNTDFKVLYPTLTDYDIRYYIYELLKA 138
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L +CH +GI+HRDVK N++ID L++ D+GLA ++ P K+ RV + +++ PE
Sbjct: 139 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPE 196
Query: 292 LLLGATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
LL+ DY +D+WS GC+ A M F P G +QL +I K+ G+
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH- 183
+ Y+ + KVG+G YS V++ ++ + + K +P K + REI ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-----------QLLSG 232
PNIVKL + + + L+FE+ ++N + K+ P +LL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY--------VNNTDFKVLYPTLTDYDIRYYIYELLKA 137
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L +CH +GI+HRDVK N++ID L++ D+GLA ++ P K+ RV + +++ PE
Sbjct: 138 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPE 195
Query: 292 LLLGATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
LL+ DY +D+WS GC+ A M F P G +QL +I K+ G+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH- 183
+ Y+ + KVG+G YS V++ ++ + + K +P K + REI ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-----------QLLSG 232
PNIVKL + + + L+FE+ ++N + K+ P +LL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY--------VNNTDFKVLYPTLTDYDIRYYIYELLKA 137
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L +CH +GI+HRDVK N++ID L++ D+GLA ++ P K+ RV + +++ PE
Sbjct: 138 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPE 195
Query: 292 LLLGATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
LL+ DY +D+WS GC+ A M F P G +QL +I K+ G+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y+ + KVG+G YS V++ ++ + + K +P K + REI ILQ L
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 87
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-----------QLLSG 232
PNIVKL + + + L+FE+ ++N + K+ P +LL
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEY--------VNNTDFKVLYPTLTDYDIRYYIYELLKA 139
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L +CH +GI+HRDVK N++ID L++ D+GLA ++ P K+ RV + +++ PE
Sbjct: 140 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPE 197
Query: 292 LLLGATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
LL+ DY +D+WS GC+ A M F P G +QL +I K+ G+
Sbjct: 198 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 247
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y+ + KVG+G YS V++ ++ + + K +P K + REI ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLMGG 85
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-----------QLLSG 232
PNIVKL + + + L+FE+ ++N + K+ P +LL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY--------VNNTDFKVLYPTLTDYDIRYYIYELLKA 137
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L +CH +GI+HRDVK N++ID L++ D+GLA ++ P K+ RV + +++ PE
Sbjct: 138 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPE 195
Query: 292 LLLGATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
LL+ DY +D+WS GC+ A M F P G +QL +I K+ G+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 60
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 61 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y+ + KVG+G YS V++ ++ + + K +P K + REI ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-----------QLLSG 232
PNIVKL + + + L+FE+ ++N + K+ P +LL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY--------VNNTDFKVLYPTLTDYDIRYYIYELLKA 137
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L +CH +GI+HRDVK N++ID L++ D+GLA ++ P K+ RV + +++ PE
Sbjct: 138 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPE 195
Query: 292 LLLGATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
LL+ DY +D+WS GC+ A M F P G +QL +I K+ G+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y+ + KVG+G YS V++ ++ + + K +P K + REI ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ-----------QLLSG 232
PNIVKL + + + L+FE+ ++N + K+ P +LL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY--------VNNTDFKVLYPTLTDYDIRYYIYELLKA 137
Query: 233 LQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L +CH +GI+HRDVK N++ID L++ D+GLA ++ P K+ RV + +++ PE
Sbjct: 138 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPE 195
Query: 292 LLLGATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
LL+ DY +D+WS GC+ A M F P G +QL +I K+ G+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 126/255 (49%), Gaps = 38/255 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++ V D+ TG+ A+K + K + + + RE+ +L++LDHPNI+KL
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 192 LATSRMQYSLYLVFE----------------FMQTDLARIISNPEGKLTEPQQLLSGLQH 235
+ + YLV E F + D ARII +Q+LSG+ +
Sbjct: 117 FFEDKGYF--YLVGEVYTGGELFDEIISRKRFSEVDAARII----------RQVLSGITY 164
Query: 236 CHDRGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
H I+HRD+K NLL++ K+ ++I DFGL+ +F +KK + ++ T +Y APE+
Sbjct: 165 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEV 222
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLS 352
L G Y D+WS G +L + G P G E + L ++ K + WKK+ S
Sbjct: 223 LHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 280
Query: 353 T--TFRPPQSYKPRL 365
R +Y P +
Sbjct: 281 AKDLIRKMLTYVPSM 295
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 126/255 (49%), Gaps = 38/255 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++ V D+ TG+ A+K + K + + + RE+ +L++LDHPNI+KL
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 192 LATSRMQYSLYLVFE----------------FMQTDLARIISNPEGKLTEPQQLLSGLQH 235
+ + YLV E F + D ARII +Q+LSG+ +
Sbjct: 118 FFEDKGYF--YLVGEVYTGGELFDEIISRKRFSEVDAARII----------RQVLSGITY 165
Query: 236 CHDRGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
H I+HRD+K NLL++ K+ ++I DFGL+ +F +KK + ++ T +Y APE+
Sbjct: 166 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEV 223
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLS 352
L G Y D+WS G +L + G P G E + L ++ K + WKK+ S
Sbjct: 224 LHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 281
Query: 353 T--TFRPPQSYKPRL 365
R +Y P +
Sbjct: 282 AKDLIRKMLTYVPSM 296
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 126/255 (49%), Gaps = 38/255 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++ V D+ TG+ A+K + K + + + RE+ +L++LDHPNI+KL
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 192 LATSRMQYSLYLVFE----------------FMQTDLARIISNPEGKLTEPQQLLSGLQH 235
+ + YLV E F + D ARII +Q+LSG+ +
Sbjct: 94 FFEDKGYF--YLVGEVYTGGELFDEIISRKRFSEVDAARII----------RQVLSGITY 141
Query: 236 CHDRGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
H I+HRD+K NLL++ K+ ++I DFGL+ +F +KK + ++ T +Y APE+
Sbjct: 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEV 199
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLS 352
L G Y D+WS G +L + G P G E + L ++ K + WKK+ S
Sbjct: 200 LHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257
Query: 353 T--TFRPPQSYKPRL 365
R +Y P +
Sbjct: 258 AKDLIRKMLTYVPSM 272
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 113/220 (51%), Gaps = 15/220 (6%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKL 181
+ + +D + +G+G + NVY A ++ I+ALK + E V+ + REI I L
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFM-QTDLARIISNPEGKLTEP------QQLLSGLQ 234
HPNI+++ R + +YL+ EF + +L + + G+ E ++L L
Sbjct: 72 RHPNILRMYNYFHDRKR--IYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALH 128
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL 294
+CH+R ++HRD+K NLL+ G LKIADFG + + ++R + TL Y PE++
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG---TLDYLPPEMIE 185
Query: 295 GATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
G T + +DLW AG L E +G P + E RI
Sbjct: 186 GKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 115/219 (52%), Gaps = 13/219 (5%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKL 181
+ E +D +G+G + NVY A +R + I+ALK + E V+ + RE+ I L
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQH 235
HPNI++L G + +YL+ E+ + +L ++ E + T +L + L +
Sbjct: 70 RHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSY 127
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH + ++HRD+K NLL+ NG LKIADFG + + +P+ +R T+ TL Y PE++ G
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEMIEG 184
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
+ +DLWS G L E +G P T E RI
Sbjct: 185 RM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G Y V A++R T + VA+K V K P ++K +EI I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINAML 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
+P AE Y+ + +G G+Y K + GKI+ K++ + + + + E+ +L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQ-TDLARIIS---------NPEGKLTEPQQL 229
+L HPNIV+ R +LY+V E+ + DLA +I+ + E L QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 230 LSGLQHCHDRG-----ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVT 284
L+ CH R +LHRD+K +N+ +D +K+ DFGLA + + T V T
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF-VGT 179
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQ 330
+Y +PE + Y D+WS GCLL E+ +MP T Q
Sbjct: 180 PYYMSPE-QMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQ 221
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I ++V +P K + RE+ IL+ L
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAIN-----ITNNERVVVKILKPVKKKKIKREVKILENLRGG 92
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
NI+KL + + LVFE++ TD L +I+++ + + +LL L +CH +
Sbjct: 93 TNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYM-YELLKALDYCHSK 151
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID + L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 152 GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE--YNVRVASRYFKGPELLVDYQM 209
Query: 299 YGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M R P G+ +QL RI K+ G+
Sbjct: 210 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT 252
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
+P AE Y+ + +G G+Y K + GKI+ K++ + + + + E+ +L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQ-TDLARIIS---------NPEGKLTEPQQL 229
+L HPNIV+ R +LY+V E+ + DLA +I+ + E L QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 230 LSGLQHCHDRG-----ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVT 284
L+ CH R +LHRD+K +N+ +D +K+ DFGLA + + + V T
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA-KAFVGT 179
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQ 330
+Y +PE + Y D+WS GCLL E+ +MP T Q
Sbjct: 180 PYYMSPE-QMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQ 221
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVAVKILKPVKKKKIKREIKILENLRGG 91
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-MYEILKALDYCHSM 150
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N+LID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 151 GIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 208
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 126/255 (49%), Gaps = 38/255 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++ V D+ TG+ A+K + K + + + RE+ +L++LDHPNI+KL
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 192 LATSRMQYSLYLVFE----------------FMQTDLARIISNPEGKLTEPQQLLSGLQH 235
+ + YLV E F + D ARII +Q+LSG+ +
Sbjct: 100 FFEDKGYF--YLVGEVYTGGELFDEIISRKRFSEVDAARII----------RQVLSGITY 147
Query: 236 CHDRGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
H I+HRD+K NLL++ K+ ++I DFGL+ +F +KK + ++ T +Y APE+
Sbjct: 148 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEV 205
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLS 352
L G Y D+WS G +L + G P G E + L ++ K + WKK+ S
Sbjct: 206 LHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 263
Query: 353 T--TFRPPQSYKPRL 365
R +Y P +
Sbjct: 264 AKDLIRKMLTYVPSM 278
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I ++V +P K + RE+ IL+ L
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAIN-----ITNNERVVVKILKPVKKKKIKREVKILENLRGG 97
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
NI+KL + + LVFE++ TD L +I+++ + + +LL L +CH +
Sbjct: 98 TNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYM-YELLKALDYCHSK 156
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID + L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 157 GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE--YNVRVASRYFKGPELLVDYQM 214
Query: 299 YGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M R P G+ +QL RI K+ G+
Sbjct: 215 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT 257
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
+P AE Y+ + +G G+Y K + GKI+ K++ + + + + E+ +L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQ-TDLARIIS---------NPEGKLTEPQQL 229
+L HPNIV+ R +LY+V E+ + DLA +I+ + E L QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 230 LSGLQHCHDRG-----ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVT 284
L+ CH R +LHRD+K +N+ +D +K+ DFGLA + ++ V T
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA-KEFVGT 179
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQ 330
+Y +PE + Y D+WS GCLL E+ +MP T Q
Sbjct: 180 PYYMSPE-QMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQ 221
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 18/226 (7%)
Query: 120 VPKSAESYDKID---KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREI 175
+PK + D D +G+G + NVY A ++ I+ALK + E V+ + REI
Sbjct: 7 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 66
Query: 176 MILQKLDHPNIVKLEGLATSRMQYSLYLVFEFM-QTDLARIISNPEGKLTEP------QQ 228
I L HPNI+++ R + +YL+ EF + +L + + G+ E ++
Sbjct: 67 EIQSHLRHPNILRMYNYFHDRKR--IYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEE 123
Query: 229 LLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
L L +CH+R ++HRD+K NLL+ G LKIADFG + + ++R + TL Y
Sbjct: 124 LADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG---TLDYL 180
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
PE++ G T + +DLW AG L E +G P + E RI
Sbjct: 181 PPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 38/253 (15%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++ V D+ TG+ A+K + K + + + RE+ +L++LDHPNI KL
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 192 LATSRMQYSLYLVFE----------------FMQTDLARIISNPEGKLTEPQQLLSGLQH 235
+ + YLV E F + D ARII +Q+LSG+ +
Sbjct: 94 FFEDKGYF--YLVGEVYTGGELFDEIISRKRFSEVDAARII----------RQVLSGITY 141
Query: 236 CHDRGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
H I+HRD+K NLL++ K+ ++I DFGL+ +F +KK ++ T +Y APE+
Sbjct: 142 XHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXK--DKIGTAYYIAPEV 199
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLS 352
L G Y D+WS G +L + G P G E + L ++ K + WKK+ S
Sbjct: 200 LHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257
Query: 353 T--TFRPPQSYKP 363
R +Y P
Sbjct: 258 AKDLIRKXLTYVP 270
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 122/234 (52%), Gaps = 28/234 (11%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRD---TGKIVALKKVKFD-----TSEPHSVKF--- 170
K ESY K+ K+G G Y V +++ I +KK +FD + KF
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92
Query: 171 MAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP--- 226
+ EI +L+ LDHPNI+KL + + + YLV EF + +L I N K E
Sbjct: 93 IYNEISLLKSLDHPNIIKLFDVFEDKKYF--YLVTEFYEGGELFEQIINRH-KFDECDAA 149
Query: 227 ---QQLLSGLQHCHDRGILHRDVKGSNLLID-KNGVL--KIADFGLANYFSPNKKRPLTS 280
+Q+LSG+ + H I+HRD+K N+L++ KN +L KI DFGL+++FS + K L
Sbjct: 150 NIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK--LRD 207
Query: 281 RVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
R+ T +Y APE+L Y D+WS G ++ + G P G+ + + + ++
Sbjct: 208 RLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 18/226 (7%)
Query: 120 VPKSAESYDKID---KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREI 175
+PK + D D +G+G + NVY A ++ I+ALK + E V+ + REI
Sbjct: 6 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 176 MILQKLDHPNIVKLEGLATSRMQYSLYLVFEFM-QTDLARIISNPEGKLTEP------QQ 228
I L HPNI+++ R + +YL+ EF + +L + + G+ E ++
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKR--IYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEE 122
Query: 229 LLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
L L +CH+R ++HRD+K NLL+ G LKIADFG + + ++R + TL Y
Sbjct: 123 LADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG---TLDYL 179
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
PE++ G T + +DLW AG L E +G P + E RI
Sbjct: 180 PPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 13/219 (5%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKL 181
+ E +D +G+G + NVY A +R + I+ALK + E V+ + RE+ I L
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQH 235
HPNI++L G + +YL+ E+ + +L ++ E + T +L + L +
Sbjct: 70 RHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSY 127
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
CH + ++HRD+K NLL+ NG LKIADFG + + +++ L TL Y PE++ G
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMIEG 184
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
+ +DLWS G L E +G P T E RI
Sbjct: 185 RM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKL 181
E +D + +G+G V A++R T + VA+K V K P ++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQH 235
+H N+VK G R YL E+ P+ + EP QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLL 294
H GI HRD+K NLL+D+ LKI+DFGLA F N + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 102 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 159
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 160 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 215
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 93 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 150
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 151 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 206
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 207 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 238
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 81 YFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 194
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +K+GQG VY A+D TG+ VA++++ +P + + EI+++++ +PNI
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKK-ELIINEILVMRENKNPNI 79
Query: 187 VKLEGLATSRMQYSLYLVFEFMQ----TDLARIISNPEGKLTE-PQQLLSGLQHCHDRGI 241
V L + + L++V E++ TD+ EG++ ++ L L+ H +
Sbjct: 80 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
+HRD+K N+L+ +G +K+ DFG +P + + ++ V T ++ APE++ YG
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-STMVGTPYWMAPEVVTRKA-YGP 195
Query: 302 GIDLWSAGCLLAEMFLGRP 320
+D+WS G + EM G P
Sbjct: 196 KVDIWSLGIMAIEMIEGEP 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 104/212 (49%), Gaps = 12/212 (5%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-PHSVKFMAREIMILQKLDH 183
E Y +DK+G G S VY A D VA+K + E ++K RE+ +L H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISN-----PEGKLTEPQQLLSGLQHCH 237
NIV + + Y YLV E+++ L+ I + + + Q+L G++H H
Sbjct: 71 QNIVSMIDVDEEDDCY--YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH 128
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG-A 296
D I+HRD+K N+LID N LKI DFG+A S + T+ Y +PE G A
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEV 328
TD D++S G +L EM +G P G T V
Sbjct: 189 TDECT--DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 81 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 194
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +K+GQG VY A+D TG+ VA++++ +P + + EI+++++ +PNI
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKK-ELIINEILVMRENKNPNI 79
Query: 187 VKLEGLATSRMQYSLYLVFEFMQ----TDLARIISNPEGKLTE-PQQLLSGLQHCHDRGI 241
V L + + L++V E++ TD+ EG++ ++ L L+ H +
Sbjct: 80 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
+HRD+K N+L+ +G +K+ DFG +P + + + V T ++ APE++ YG
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVTRKA-YGP 195
Query: 302 GIDLWSAGCLLAEMFLGRP 320
+D+WS G + EM G P
Sbjct: 196 KVDIWSLGIMAIEMIEGEP 214
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +K+GQG VY A+D TG+ VA++++ +P + + EI+++++ +PNI
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKK-ELIINEILVMRENKNPNI 79
Query: 187 VKLEGLATSRMQYSLYLVFEFMQ----TDLARIISNPEGKLTE-PQQLLSGLQHCHDRGI 241
V L + + L++V E++ TD+ EG++ ++ L L+ H +
Sbjct: 80 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
+HRD+K N+L+ +G +K+ DFG +P + + + V T ++ APE++ YG
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SEMVGTPYWMAPEVVTRKA-YGP 195
Query: 302 GIDLWSAGCLLAEMFLGRP 320
+D+WS G + EM G P
Sbjct: 196 KVDIWSLGIMAIEMIEGEP 214
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 77 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 135 IKPENLLLGSAGELKIADFGWSCH-APSSRR--TTLSGTLDYLPPEMIEGRM-HDEKVDL 190
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +K+GQG VY A+D TG+ VA++++ +P + + EI+++++ +PNI
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKK-ELIINEILVMRENKNPNI 80
Query: 187 VKLEGLATSRMQYSLYLVFEFMQ----TDLARIISNPEGKLTE-PQQLLSGLQHCHDRGI 241
V L + + L++V E++ TD+ EG++ ++ L L+ H +
Sbjct: 81 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
+HRD+K N+L+ +G +K+ DFG +P + + + V T ++ APE++ YG
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVTRKA-YGP 196
Query: 302 GIDLWSAGCLLAEMFLGRP 320
+D+WS G + EM G P
Sbjct: 197 KVDIWSLGIMAIEMIEGEP 215
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 81 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T TL Y PE++ G + +DL
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TDLCGTLDYLPPEMIEGRM-HDEKVDL 194
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TELCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 77 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T TL Y PE++ G + +DL
Sbjct: 135 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TDLCGTLDYLPPEMIEGRM-HDEKVDL 190
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 81 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE + G + +DL
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEXIEGRX-HDEKVDL 194
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TDLCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 75 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 132
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 133 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 188
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 189 WSLGVLCYEFLVGKPPFEANTYQETYKRI 217
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 119/241 (49%), Gaps = 19/241 (7%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
++ I ++G G + VYKA +++T + A K + DT ++ EI IL DHPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNI 96
Query: 187 VKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDR 239
VKL L + +L+++ EF + ++ E LTE Q Q L L + HD
Sbjct: 97 VKL--LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD- 298
I+HRD+K N+L +G +K+ADFG++ + +R S + T ++ APE+++ T
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR-DSFIGTPYWMAPEVVMCETSK 213
Query: 299 ---YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y D+WS G L EM I P E+ + + K+ S + R S+ F
Sbjct: 214 DRPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 356 R 356
+
Sbjct: 271 K 271
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 80 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 138 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 193
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 194 WSLGVLCYEFLVGKPPFEANTYQETYKRI 222
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TDLCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 102 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 159
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +++ L TL Y PE++ G + +DL
Sbjct: 160 IKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG---TLDYLPPEMIEGRM-HDEKVDL 215
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 25/244 (10%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
++ I ++G G + VYKA +++T + A K + DT ++ EI IL DHPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNI 96
Query: 187 VKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDR 239
VKL L + +L+++ EF + ++ E LTE Q Q L L + HD
Sbjct: 97 VKL--LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR---VVTLWYRAPELLLGA 296
I+HRD+K N+L +G +K+ADFG+ S R + R + T ++ APE+++
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 297 TD----YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLS 352
T Y D+WS G L EM I P E+ + + K+ S + R S
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWS 267
Query: 353 TTFR 356
+ F+
Sbjct: 268 SNFK 271
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 25/244 (10%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
++ I ++G G + VYKA +++T + A K + DT ++ EI IL DHPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNI 96
Query: 187 VKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDR 239
VKL L + +L+++ EF + ++ E LTE Q Q L L + HD
Sbjct: 97 VKL--LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR---VVTLWYRAPELLLGA 296
I+HRD+K N+L +G +K+ADFG+ S R + R + T ++ APE+++
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 297 TD----YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLS 352
T Y D+WS G L EM I P E+ + + K+ S + R S
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWS 267
Query: 353 TTFR 356
+ F+
Sbjct: 268 SNFK 271
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y + +K+GQG VY A+D TG+ VA++++ +P + + EI+++++ +PNI
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKK-ELIINEILVMRENKNPNI 80
Query: 187 VKLEGLATSRMQYSLYLVFEFMQ----TDLARIISNPEGKLTE-PQQLLSGLQHCHDRGI 241
V L + + L++V E++ TD+ EG++ ++ L L+ H +
Sbjct: 81 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
+HR++K N+L+ +G +K+ DFG +P + + ++ V T ++ APE++ YG
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-STMVGTPYWMAPEVVTRKA-YGP 196
Query: 302 GIDLWSAGCLLAEMFLGRP 320
+D+WS G + EM G P
Sbjct: 197 KVDIWSLGIMAIEMIEGEP 215
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 81 YFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +++ L TL Y PE++ G + +DL
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXG---TLDYLPPEMIEGRM-HDEKVDL 194
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 78 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 135
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIA+FG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 136 IKPENLLLGSAGELKIANFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 191
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 121/226 (53%), Gaps = 21/226 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHC 236
PNI+ L + + + LVFE + TD ++ LT+ ++L L +C
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 147
Query: 237 HDRGILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
H GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVD 205
Query: 296 ATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 78 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 135
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +++ L TL Y PE++ G + +DL
Sbjct: 136 IKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM-HDEKVDL 191
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 90
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-MYEILKALDYCHSM 149
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 207
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 121/226 (53%), Gaps = 21/226 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 96
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHC 236
PNI+ L + + + LVFE + TD ++ LT+ ++L L +C
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 152
Query: 237 HDRGILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
H GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 153 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVD 210
Query: 296 ATDYGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 211 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 256
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TXLCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-MYEILKALDYCHSM 150
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 208
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-MYEILKALDYCHSM 150
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 208
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +++ L TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM-HDEKVDL 192
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
WS G L E +G+P T E RI ++
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-MYEILKALDYCHSM 150
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 208
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 90
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-MYEILKALDYCHSM 149
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 207
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-MYEILKALDYCHSM 150
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 208
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-MYEILKALDYCHSM 150
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 208
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-MYEILKALDYCHSM 150
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 208
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-MYEILKALDYCHSM 150
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 208
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 89
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TD---LARIISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD L + +++ + + ++L L +CH
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYM-YEILKALDYCHSM 148
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 206
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 249
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y + K+G+G YS V++A++ I +KV +P K + REI IL+ L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-TDLARI---ISNPEGKLTEPQQLLSGLQHCHDR 239
PNI+ L + + + LVFE + TD ++ +++ + + ++L L +CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYDIRFY-MYEILKALDYCHSM 150
Query: 240 GILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
GI+HRDVK N++ID ++ L++ D+GLA ++ P ++ RV + +++ PELL+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQM 208
Query: 299 YGVGIDLWSAGCLLAEM-FLGRPIMPGRTEVEQLHRIFKLCGS 340
Y +D+WS GC+LA M F P G +QL RI K+ G+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 77 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +++ L TL Y PE++ G + +DL
Sbjct: 135 IKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMIEGRM-HDEKVDL 190
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 73 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 130
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 131 IKPENLLLGSAGELKIADFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 186
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 187 WSLGVLCYEFLVGKPPFEANTYQETYKRI 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIA+FG + + +P+ +R T+ TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIANFGWSVH-APSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R + TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVH-APSSRR--AALCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++++ I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 76 YFHDSTR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRD 133
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R + TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVH-APSSRR--AALCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T + RI
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQDTYKRI 218
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +++ L TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM-HDEKVDL 192
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +++ L TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM-HDEKVDL 189
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + I+ALK + E V+ + RE+ I L HPNI++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
+ +YL+ E+ + +L ++ E + T +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +++ L TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG---TLDYLPPEMIEGRM-HDEKVDL 192
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
WS G L E +G+P T E RI
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 17/232 (7%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
K + Y+ +G+G++ V KA DR + VA+K +K + + + R + ++ K
Sbjct: 32 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH 91
Query: 182 DHPNIVKLEGLATSRM-QYSLYLVFEFMQTDLARIISNPEGK-----LTE--PQQLLSGL 233
D + L M + L LVFE + +L ++ N + LT QQ+ + L
Sbjct: 92 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 151
Query: 234 QHCH--DRGILHRDVKGSNLLI--DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRA 289
+ I+H D+K N+L+ K +KI DFG + + + SR +YR+
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR----FYRS 207
Query: 290 PELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP 341
PE+LLG Y + ID+WS GC+L EM G P+ G EV+Q+++I ++ G P
Sbjct: 208 PEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 17/232 (7%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
K + Y+ +G+G++ V KA DR + VA+K +K + + + R + ++ K
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH 110
Query: 182 DHPNIVKLEGLATSRM-QYSLYLVFEFMQTDLARIISNPEGK-----LTE--PQQLLSGL 233
D + L M + L LVFE + +L ++ N + LT QQ+ + L
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 234 QHCH--DRGILHRDVKGSNLLI--DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRA 289
+ I+H D+K N+L+ K +KI DFG + + + SR +YR+
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR----FYRS 226
Query: 290 PELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP 341
PE+LLG Y + ID+WS GC+L EM G P+ G EV+Q+++I ++ G P
Sbjct: 227 PEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 20/210 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV---KFDTSEPHSVKFMAREIMILQKL 181
+ Y+ + +G+G +S V + ++R+TG+ A+K V KF +S S + + RE I L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQ-TDLA-RIISNPEGKLTEPQ--------QLLS 231
HP+IV+L L T LY+VFEFM DL I+ + + Q+L
Sbjct: 84 KHPHIVEL--LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 232 GLQHCHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
L++CHD I+HRDVK N+L+ + + +K+ DFG+A + RV T +
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVA-GGRVGTPHFM 200
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLG 318
APE ++ YG +D+W G +L + G
Sbjct: 201 APE-VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
+S E Y ++ K+G+G++ + G+ +K++ + RE+ +L +
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM 80
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQLLS-------GL 233
HPNIV+ + SLY+V ++ + DL + I+ +G L + Q+L L
Sbjct: 81 KHPNIVQYR--ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL 138
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPEL 292
+H HDR ILHRD+K N+ + K+G +++ DFG+A N L + T +Y +PE+
Sbjct: 139 KHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEI 196
Query: 293 LLGATDYGVGIDLWSAGCLLAEM 315
Y D+W+ GC+L E+
Sbjct: 197 CENKP-YNNKSDIWALGCVLYEL 218
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 17/232 (7%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
K + Y+ +G+G++ V KA DR + VA+K +K + + + R + ++ K
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH 110
Query: 182 DHPNIVKLEGLATSRM-QYSLYLVFEFMQTDLARIISNPEGK-----LTE--PQQLLSGL 233
D + L M + L LVFE + +L ++ N + LT QQ+ + L
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 234 QHCH--DRGILHRDVKGSNLLI--DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRA 289
+ I+H D+K N+L+ K +KI DFG + + + SR +YR+
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSR----FYRS 226
Query: 290 PELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP 341
PE+LLG Y + ID+WS GC+L EM G P+ G EV+Q+++I ++ G P
Sbjct: 227 PEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 19/234 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
YD D +G G +S V A D+ T K+VA+K + + E M EI +L K+ HPNI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHPNI 78
Query: 187 VKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ------QLLSGLQHCHD 238
V L+ + S LYL+ + + RI+ +G TE Q+L +++ HD
Sbjct: 79 VALDDIYESGGH--LYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHD 134
Query: 239 RGILHRDVKGSNLL---IDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
GI+HRD+K NLL +D++ + I+DFGL+ P L++ T Y APE +L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPE-VLA 191
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL 349
Y +D WS G + + G P + + +I K YW +
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 19/234 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
YD D +G G +S V A D+ T K+VA+K + + E M EI +L K+ HPNI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHPNI 78
Query: 187 VKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ------QLLSGLQHCHD 238
V L+ + S LYL+ + + RI+ +G TE Q+L +++ HD
Sbjct: 79 VALDDIYESGGH--LYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHD 134
Query: 239 RGILHRDVKGSNLL---IDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
GI+HRD+K NLL +D++ + I+DFGL+ P L++ T Y APE +L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPE-VLA 191
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL 349
Y +D WS G + + G P + + +I K YW +
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 19/234 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
YD D +G G +S V A D+ T K+VA+K + + E M EI +L K+ HPNI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHPNI 78
Query: 187 VKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ------QLLSGLQHCHD 238
V L+ + S LYL+ + + RI+ +G TE Q+L +++ HD
Sbjct: 79 VALDDIYESGGH--LYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHD 134
Query: 239 RGILHRDVKGSNLL---IDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
GI+HRD+K NLL +D++ + I+DFGL+ P L++ T Y APE +L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPE-VLA 191
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL 349
Y +D WS G + + G P + + +I K YW +
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 19/234 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
YD D +G G +S V A D+ T K+VA+K + E M EI +L K+ HPNI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS-MENEIAVLHKIKHPNI 78
Query: 187 VKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ------QLLSGLQHCHD 238
V L+ + S LYL+ + + RI+ +G TE Q+L +++ HD
Sbjct: 79 VALDDIYESGGH--LYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHD 134
Query: 239 RGILHRDVKGSNLL---IDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
GI+HRD+K NLL +D++ + I+DFGL+ P L++ T Y APE +L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPE-VLA 191
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKL 349
Y +D WS G + + G P + + +I K YW +
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 15/209 (7%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQ 179
P++ + Y + +G+G ++ Y+ D DT ++ A K V K +PH + M+ EI I +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGL 233
LD+P++V G +Y+V E + + +TEP+ Q + G+
Sbjct: 98 SLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANY--FSPNKKRPLTSRVVTLWYRAPE 291
Q+ H+ ++HRD+K NL ++ + +KI DFGLA F +K+ L T Y APE
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCG---TPNYIAPE 212
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + +D+WS GC+L + +G+P
Sbjct: 213 VLC-KKGHSFEVDIWSLGCILYTLLVGKP 240
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 15/209 (7%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQ 179
P++ + Y + +G+G ++ Y+ D DT ++ A K V K +PH + M+ EI I +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGL 233
LD+P++V G +Y+V E + + +TEP+ Q + G+
Sbjct: 98 SLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANY--FSPNKKRPLTSRVVTLWYRAPE 291
Q+ H+ ++HRD+K NL ++ + +KI DFGLA F +K+ L T Y APE
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCG---TPNYIAPE 212
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + +D+WS GC+L + +G+P
Sbjct: 213 VLC-KKGHSFEVDIWSLGCILYTLLVGKP 240
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 15/209 (7%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQ 179
P++ + Y + +G+G ++ Y+ D DT ++ A K V K +PH + M+ EI I +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGL 233
LD+P++V G +Y+V E + + +TEP+ Q + G+
Sbjct: 98 SLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANY--FSPNKKRPLTSRVVTLWYRAPE 291
Q+ H+ ++HRD+K NL ++ + +KI DFGLA F +K+ L T Y APE
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG---TPNYIAPE 212
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + +D+WS GC+L + +G+P
Sbjct: 213 VLC-KKGHSFEVDIWSLGCILYTLLVGKP 240
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 15/209 (7%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQ 179
P++ + Y + +G+G ++ Y+ D DT ++ A K V K +PH + M+ EI I +
Sbjct: 22 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 81
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGL 233
LD+P++V G +Y+V E + + +TEP+ Q + G+
Sbjct: 82 SLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 139
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANY--FSPNKKRPLTSRVVTLWYRAPE 291
Q+ H+ ++HRD+K NL ++ + +KI DFGLA F +K+ L T Y APE
Sbjct: 140 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG---TPNYIAPE 196
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + +D+WS GC+L + +G+P
Sbjct: 197 VLC-KKGHSFEVDIWSLGCILYTLLVGKP 224
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 112 PREVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFM 171
PRE LA + K+G+G+ V A ++ TGK VA+KK+ + + F
Sbjct: 43 PREYLANFI-----------KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF- 90
Query: 172 AREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD-LARIIS----NPEGKLTEP 226
E++I++ H N+V + ++ + L++V EF++ L I++ N E T
Sbjct: 91 -NEVVIMRDYHHDNVVDM--YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVC 147
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TL 285
+L L + H++G++HRD+K ++L+ +G +K++DFG S K+ P +V T
Sbjct: 148 LSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS--KEVPKRKXLVGTP 205
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
++ APE ++ YG +D+WS G ++ EM G P
Sbjct: 206 YWMAPE-VISRLPYGTEVDIWSLGIMVIEMIDGEP 239
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 117/244 (47%), Gaps = 21/244 (8%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E ++ + ++G G + VYKA +++TG + A K + +T ++ EI IL DHP
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELEDYIVEIEILATCDHP 76
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCH 237
IVKL L L+++ EF + I+ + LTEPQ Q+L L H
Sbjct: 77 YIVKL--LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGL-ANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
+ I+HRD+K N+L+ G +++ADFG+ A +KR S + T ++ APE+++
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR--DSFIGTPYWMAPEVVMCE 192
Query: 297 ----TDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLS 352
T Y D+WS G L EM I P E+ + + K+ S + S
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEM---AQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS 249
Query: 353 TTFR 356
FR
Sbjct: 250 VEFR 253
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 112/232 (48%), Gaps = 18/232 (7%)
Query: 136 GTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGLATS 195
G + VYKA +++T + A K + DT ++ EI IL DHPNIVKL L
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNIVKL--LDAF 76
Query: 196 RMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRDVKG 248
+ +L+++ EF + ++ E LTE Q Q L L + HD I+HRD+K
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 249 SNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD----YGVGID 304
N+L +G +K+ADFG++ + + S + T ++ APE+++ T Y D
Sbjct: 137 GNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 196
Query: 305 LWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFR 356
+WS G L EM I P E+ + + K+ S + R S+ F+
Sbjct: 197 VWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 245
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 118/244 (48%), Gaps = 21/244 (8%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E ++ + ++G G + VYKA +++TG + A K ++ + E ++ EI IL DHP
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE--ELEDYIVEIEILATCDHP 68
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCH 237
IVKL L L+++ EF + I+ + LTEPQ Q+L L H
Sbjct: 69 YIVKL--LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGL-ANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
+ I+HRD+K N+L+ G +++ADFG+ A +KR S + T ++ APE+++
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR--DSFIGTPYWMAPEVVMCE 184
Query: 297 ----TDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLS 352
T Y D+WS G L EM I P E+ + + K+ S + S
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEM---AQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS 241
Query: 353 TTFR 356
FR
Sbjct: 242 VEFR 245
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHP 184
+Y + +G+G++ V A TG+ VALK + ++ + REI L+ L HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHD 238
+I+KL + S+ + + +V E+ +L I + K++E QQ++S +++CH
Sbjct: 74 HIIKLYDVIKSKDE--IIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 130
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
I+HRD+K NLL+D++ +KIADFGL+N + L + + Y APE++ G
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF--LKTSCGSPNYAAPEVISGKLY 188
Query: 299 YGVGIDLWSAGCLLAEMFLGR 319
G +D+WS G +L M R
Sbjct: 189 AGPEVDVWSCGVILYVMLCRR 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 12/196 (6%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKL 189
+ +G+G++ V A T + VALK + + + + REI L+ L HP+I+KL
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 190 EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDRGILH 243
+ T+ + +V E+ +L I + ++TE QQ++ +++CH I+H
Sbjct: 75 YDVITTPT--DIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKIVH 131
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+K NLL+D N +KIADFGL+N + L + + Y APE++ G G +
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIMTDGNF--LKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 304 DLWSAGCLLAEMFLGR 319
D+WS G +L M +GR
Sbjct: 190 DVWSCGIVLYVMLVGR 205
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHP 184
+Y + +G+G++ V A TG+ VALK + ++ + REI L+ L HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHD 238
+I+KL + S+ + + +V E+ +L I + K++E QQ++S +++CH
Sbjct: 75 HIIKLYDVIKSKDE--IIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 131
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
I+HRD+K NLL+D++ +KIADFGL+N + L + + Y APE++ G
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF--LKTSCGSPNYAAPEVISGKLY 189
Query: 299 YGVGIDLWSAGCLLAEMFLGR 319
G +D+WS G +L M R
Sbjct: 190 AGPEVDVWSCGVILYVMLCRR 210
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 18/241 (7%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAR 173
E + K +++YD +++G+G +S V + + + TG A K + + + R
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77
Query: 174 EIMILQKLDHPNIVKLEGLATSRMQYSLYLVF------EFMQTDLARIISNPEGKLTEPQ 227
E I +KL HPNIV+L + + + YLVF E + +AR + Q
Sbjct: 78 EARICRKLQHPNIVRLHD--SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ 135
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVT 284
Q+L + +CH GI+HR++K NLL+ K +K+ADFGLA N T
Sbjct: 136 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGT 193
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
Y +PE +L Y +D+W+ G +L + +G P E HR++ + + D
Sbjct: 194 PGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYD 248
Query: 345 Y 345
Y
Sbjct: 249 Y 249
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVK-FMAREIMILQKLDHP 184
+Y + +G+G++ V A TG+ VALK + ++ + REI L+ L HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHD 238
+I+KL + S+ + + +V E+ +L I + K++E QQ++S +++CH
Sbjct: 65 HIIKLYDVIKSKDE--IIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 121
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
I+HRD+K NLL+D++ +KIADFGL+N + L + + Y APE++ G
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF--LKTSCGSPNYAAPEVISGKLY 179
Query: 299 YGVGIDLWSAGCLLAEMFLGR 319
G +D+WS G +L M R
Sbjct: 180 AGPEVDVWSCGVILYVMLCRR 200
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 113/214 (52%), Gaps = 14/214 (6%)
Query: 116 LAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMARE 174
LA + + E + + +G+G+++ VY+A TG VA+K + K + V+ + E
Sbjct: 2 LATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 175 IMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------ 227
+ I +L HP+I++L +YLV E ++ R + N +E +
Sbjct: 62 VKIHCQLKHPSILELYNYFED--SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS-PNKKRPLTSRVVTLW 286
Q+++G+ + H GILHRD+ SNLL+ +N +KIADFGLA P++K + T
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH--YTLCGTPN 177
Query: 287 YRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
Y +PE+ + +G+ D+WS GC+ + +GRP
Sbjct: 178 YISPEIATRSA-HGLESDVWSLGCMFYTLLIGRP 210
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 126 SYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHP 184
+Y + +G+G++ V A TG+ VALK + ++ + REI L+ L HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHD 238
+I+KL + S+ + + +V E+ +L I + K++E QQ++S +++CH
Sbjct: 69 HIIKLYDVIKSKDE--IIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 125
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
I+HRD+K NLL+D++ +KIADFGL+N + L + + Y APE++ G
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF--LKTSCGSPNYAAPEVISGKLY 183
Query: 299 YGVGIDLWSAGCLLAEMFLGR 319
G +D+WS G +L M R
Sbjct: 184 AGPEVDVWSCGVILYVMLCRR 204
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 112/203 (55%), Gaps = 14/203 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E + K++K+G+G++ V+K +D T K+VA+K + + +E ++ + +EI +L + D P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSP 65
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
+ K G + L+++ E++ A + P G L E Q ++L GL + H
Sbjct: 66 YVTKYYG--SYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHS 122
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-KRPLTSRVVTLWYRAPELLLGAT 297
+HRD+K +N+L+ ++G +K+ADFG+A + + KR + V T ++ APE ++ +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAPE-VIKQS 179
Query: 298 DYGVGIDLWSAGCLLAEMFLGRP 320
Y D+WS G E+ G P
Sbjct: 180 AYDSKADIWSLGITAIELARGEP 202
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 14/203 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E + K++K+G+G++ V+K +D T K+VA+K + + +E ++ + +EI +L + D P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSP 80
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
+ K G + L+++ E++ A + P G L E Q ++L GL + H
Sbjct: 81 YVTKYYG--SYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHS 137
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-KRPLTSRVVTLWYRAPELLLGAT 297
+HRD+K +N+L+ ++G +K+ADFG+A + + KR V T ++ APE ++ +
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPE-VIKQS 194
Query: 298 DYGVGIDLWSAGCLLAEMFLGRP 320
Y D+WS G E+ G P
Sbjct: 195 AYDSKADIWSLGITAIELARGEP 217
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 111/202 (54%), Gaps = 12/202 (5%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E + K++K+G+G++ V+K +D T K+VA+K + + +E ++ + +EI +L + D P
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSP 85
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
+ K G + L+++ E++ A + P G L E Q ++L GL + H
Sbjct: 86 YVTKYYG--SYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHS 142
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+HRD+K +N+L+ ++G +K+ADFG+A + + + + V T ++ APE ++ +
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPFWMAPE-VIKQSA 200
Query: 299 YGVGIDLWSAGCLLAEMFLGRP 320
Y D+WS G E+ G P
Sbjct: 201 YDSKADIWSLGITAIELARGEP 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 18/233 (7%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
K +++YD +++G+G +S V + + + TG A K + + + RE I +KL
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVF------EFMQTDLARIISNPEGKLTEPQQLLSGLQH 235
HPNIV+L + + + YLVF E + +AR + QQ+L + +
Sbjct: 63 QHPNIVRLHD--SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 236 CHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
CH GI+HR++K NLL+ K +K+ADFGLA N T Y +PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPE- 177
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
+L Y +D+W+ G +L + +G P E HR++ + + DY
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDY 226
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 18/209 (8%)
Query: 121 PKSAESY-DKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
P SY D K+G+G+ V A R +GK+VA+KK+ + + F E++I++
Sbjct: 146 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMR 203
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD-LARIISNPEGKLTEPQ------QLLSG 232
H N+V++ + + L++V EF++ L I+++ ++ E Q +L
Sbjct: 204 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQA 259
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPE 291
L H +G++HRD+K ++L+ +G +K++DFG S K+ P +V T ++ APE
Sbjct: 260 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPE 317
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
L+ YG +D+WS G ++ EM G P
Sbjct: 318 -LISRLPYGPEVDIWSLGIMVIEMVDGEP 345
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 14/203 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E + K++K+G+G++ V+K +D T K+VA+K + + +E ++ + +EI +L + D P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSP 65
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
+ K G + L+++ E++ A + P G L E Q ++L GL + H
Sbjct: 66 YVTKYYG--SYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHS 122
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-KRPLTSRVVTLWYRAPELLLGAT 297
+HRD+K +N+L+ ++G +K+ADFG+A + + KR V T ++ APE ++ +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPE-VIKQS 179
Query: 298 DYGVGIDLWSAGCLLAEMFLGRP 320
Y D+WS G E+ G P
Sbjct: 180 AYDSKADIWSLGITAIELARGEP 202
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHS-VKFMAREIMILQKLDHPN 185
+ + ++G G++ VY A D ++VA+KK+ + + + + + +E+ LQKL HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 186 IVKLEGLATSRMQYSLYLVFEFM---QTDLARIISNPEGKL---TEPQQLLSGLQHCHDR 239
++ G +++ +LV E+ +DL + P ++ L GL + H
Sbjct: 116 TIQYRGCYLR--EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD- 298
++HRDVK N+L+ + G++K+ DFG A+ +P V T ++ APE++L +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEG 228
Query: 299 -YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
Y +D+WS G E+ +P + + L+ I
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 265
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 130 IDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
++ +G G +S V+ R TGK+ ALK +K S + EI +L+K+ H NIV L
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIK--KSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 190 EGLATSRMQYSLYLVF----EFMQTDLARIISNPEGKLTEPQQLLSGLQHCHDRGILHRD 245
E + S Y L + E L R + + QQ+LS +++ H+ GI+HRD
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 131
Query: 246 VKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVG 302
+K NLL ++N + I DFGL+ + +++ T Y APE +L Y
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPE-VLAQKPYSKA 187
Query: 303 IDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
+D WS G + + G P TE + +I
Sbjct: 188 VDCWSIGVITYILLCGYPPFYEETESKLFEKI 219
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 18/233 (7%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
K +++YD +++G+G +S V + + + TG A K + + + RE I +KL
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 182 DHPNIVKLEGLATSRMQYSLYLVF------EFMQTDLARIISNPEGKLTEPQQLLSGLQH 235
HPNIV+L + + + YLVF E + +AR + QQ+L + +
Sbjct: 62 QHPNIVRLHD--SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 236 CHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
CH GI+HR++K NLL+ K +K+ADFGLA N T Y +PE
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPE- 176
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
+L Y +D+W+ G +L + +G P E HR++ + + DY
Sbjct: 177 VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDY 225
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 18/233 (7%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
K +++YD +++G+G +S V + + + TG A K + + + RE I +KL
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVF------EFMQTDLARIISNPEGKLTEPQQLLSGLQH 235
HPNIV+L + + + YLVF E + +AR + QQ+L + +
Sbjct: 63 QHPNIVRLHD--SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 236 CHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
CH GI+HR++K NLL+ K +K+ADFGLA N T Y +PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPE- 177
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
+L Y +D+W+ G +L + +G P E HR++ + + DY
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDY 226
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 29/227 (12%)
Query: 117 AGLVPKSA---------ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV---KFDTSE 164
+GLVP+ + + Y+ + +G+G +S V + ++R+TG+ A+K V KF +S
Sbjct: 9 SGLVPRGSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP 68
Query: 165 PHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQ-TDLA-RIISNPEGK 222
S + + RE I L HP+IV+L L T LY+VFEFM DL I+ +
Sbjct: 69 GLSTEDLKREASICHMLKHPHIVEL--LETYSSDGMLYMVFEFMDGADLCFEIVKRADAG 126
Query: 223 LTEPQ--------QLLSGLQHCHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFS 271
+ Q+L L++CHD I+HRDVK +L+ + + +K+ FG+A
Sbjct: 127 FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 186
Query: 272 PNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLG 318
+ RV T + APE ++ YG +D+W G +L + G
Sbjct: 187 ESGLVA-GGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 22/245 (8%)
Query: 103 WPKWLTDNIPREVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDT 162
W K++ P EV G V + YD ++++G G + V++ +++ TG++ K + +T
Sbjct: 34 WKKYVPQ--PVEVKQGSV---YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI--NT 86
Query: 163 SEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG 221
P + EI I+ +L HP ++ L + Y + L+ EF+ +L I+ +
Sbjct: 87 PYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK--YEMVLILEFLSGGELFDRIAAEDY 144
Query: 222 KLTEPQ------QLLSGLQHCHDRGILHRDVKGSNLLID--KNGVLKIADFGLANYFSPN 273
K++E + Q GL+H H+ I+H D+K N++ + K +KI DFGLA +P+
Sbjct: 145 KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204
Query: 274 KKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHR 333
+ +T+ T + APE ++ G D+W+ G L + G G ++E L
Sbjct: 205 EIVKVTT--ATAEFAAPE-IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQN 261
Query: 334 IFKLC 338
+ K C
Sbjct: 262 V-KRC 265
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHS-VKFMAREIMILQKLDHPN 185
+ + ++G G++ VY A D ++VA+KK+ + + + + + +E+ LQKL HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 186 IVKLEGLATSRMQYSLYLVFEFM---QTDLARIISNPEGKL---TEPQQLLSGLQHCHDR 239
++ G +++ +LV E+ +DL + P ++ L GL + H
Sbjct: 77 TIQYRGCYLR--EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD- 298
++HRDVK N+L+ + G++K+ DFG A+ +P V T ++ APE++L +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEG 189
Query: 299 -YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
Y +D+WS G E+ +P + + L+ I
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 14/207 (6%)
Query: 121 PKSAESY-DKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
P SY D K+G+G+ V A R +GK+VA+KK+ + + F E++I++
Sbjct: 69 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMR 126
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD-LARIIS----NPEGKLTEPQQLLSGLQ 234
H N+V++ + + L++V EF++ L I++ N E +L L
Sbjct: 127 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 184
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELL 293
H +G++HRD+K ++L+ +G +K++DFG S K+ P +V T ++ APE L
Sbjct: 185 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPE-L 241
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+ YG +D+WS G ++ EM G P
Sbjct: 242 ISRLPYGPEVDIWSLGIMVIEMVDGEP 268
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP-N 185
++ ++ VG GTY VYK TG++ A+K + E +K +EI +L+K H N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK---QEINMLKKYSHHRN 82
Query: 186 IVKLEGLATSR----MQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ-------QLLSGL 233
I G + M L+LV EF + +I N +G + + ++L GL
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
H H ++HRD+KG N+L+ +N +K+ DFG++ R T + T ++ APE++
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF-IGTPYWMAPEVI 201
Query: 294 LGATD------YGVGIDLWSAGCLLAEMFLGRP 320
A D Y DLWS G EM G P
Sbjct: 202 --ACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 22/202 (10%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDT--SEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+GTY VY D +A+K++ + D+ S+P + EI + + L H NIV+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-----LHEEIALHKHLKHKNIVQY 84
Query: 190 EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTE--------PQQLLSGLQHCHDRGI 241
G + S + + + L+ ++ + G L + +Q+L GL++ HD I
Sbjct: 85 LG-SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 242 LHRDVKGSNLLIDK-NGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELL-LGATD 298
+HRD+KG N+LI+ +GVLKI+DFG + + P T TL Y APE++ G
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEIIDKGPRG 201
Query: 299 YGVGIDLWSAGCLLAEMFLGRP 320
YG D+WS GC + EM G+P
Sbjct: 202 YGKAADIWSLGCTIIEMATGKP 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 14/207 (6%)
Query: 121 PKSAESY-DKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
P SY D K+G+G+ V A R +GK+VA+KK+ + + F E++I++
Sbjct: 24 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMR 81
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD-LARIIS----NPEGKLTEPQQLLSGLQ 234
H N+V++ + + L++V EF++ L I++ N E +L L
Sbjct: 82 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 139
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELL 293
H +G++HRD+K ++L+ +G +K++DFG S K+ P +V T ++ APE L
Sbjct: 140 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPE-L 196
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+ YG +D+WS G ++ EM G P
Sbjct: 197 ISRLPYGPEVDIWSLGIMVIEMVDGEP 223
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 14/207 (6%)
Query: 121 PKSAESY-DKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
P SY D K+G+G+ V A R +GK+VA+KK+ + + F E++I++
Sbjct: 26 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMR 83
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD-LARIIS----NPEGKLTEPQQLLSGLQ 234
H N+V++ + + L++V EF++ L I++ N E +L L
Sbjct: 84 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 141
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELL 293
H +G++HRD+K ++L+ +G +K++DFG S K+ P +V T ++ APE L
Sbjct: 142 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPE-L 198
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+ YG +D+WS G ++ EM G P
Sbjct: 199 ISRLPYGPEVDIWSLGIMVIEMVDGEP 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+ +G+G++ V A+ + T A KK+ K+ + K +EI I++ LDHPNI++L
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK---QEIEIMKSLDHPNIIRL 88
Query: 190 EGLATSRMQYSLYLVFE----------------FMQTDLARIISNPEGKLTEPQQLLSGL 233
T +YLV E F ++D ARI+ + +LS +
Sbjct: 89 --YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD----------VLSAV 136
Query: 234 QHCHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+CH + HRD+K N L + LK+ DFGLA F P K + ++V T +Y +P
Sbjct: 137 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKVGTPYYVSP 194
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
++L G YG D WSAG ++ + G P T+ E + +I
Sbjct: 195 QVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI 236
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 14/207 (6%)
Query: 121 PKSAESY-DKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
P SY D K+G+G+ V A R +GK+VA+KK+ + + F E++I++
Sbjct: 19 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMR 76
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD-LARIIS----NPEGKLTEPQQLLSGLQ 234
H N+V++ + + L++V EF++ L I++ N E +L L
Sbjct: 77 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 134
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELL 293
H +G++HRD+K ++L+ +G +K++DFG S K+ P +V T ++ APE L
Sbjct: 135 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPE-L 191
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+ YG +D+WS G ++ EM G P
Sbjct: 192 ISRLPYGPEVDIWSLGIMVIEMVDGEP 218
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 37/223 (16%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLE 190
+ +G+G++ V A+ + T A KK+ E V +EI I++ LDHPNI++L
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNIIRL- 71
Query: 191 GLATSRMQYSLYLVFE----------------FMQTDLARIISNPEGKLTEPQQLLSGLQ 234
T +YLV E F ++D ARI+ + +LS +
Sbjct: 72 -YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD----------VLSAVA 120
Query: 235 HCHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
+CH + HRD+K N L + LK+ DFGLA F P K + ++V T +Y +P+
Sbjct: 121 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKVGTPYYVSPQ 178
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
+L G YG D WSAG ++ + G P T+ E + +I
Sbjct: 179 VLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI 219
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 14/207 (6%)
Query: 121 PKSAESY-DKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
P SY D K+G+G+ V A R +GK+VA+KK+ + + F E++I++
Sbjct: 15 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMR 72
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD-LARIIS----NPEGKLTEPQQLLSGLQ 234
H N+V++ + + L++V EF++ L I++ N E +L L
Sbjct: 73 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 130
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELL 293
H +G++HRD+K ++L+ +G +K++DFG S K+ P +V T ++ APE L
Sbjct: 131 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPE-L 187
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+ YG +D+WS G ++ EM G P
Sbjct: 188 ISRLPYGPEVDIWSLGIMVIEMVDGEP 214
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 11/163 (6%)
Query: 173 REIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEF------MQTDLARIISNPEGKLTEP 226
+EI IL+KLDHPN+VKL + + LY+VFE M+ + +S + +
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYF- 143
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW 286
Q L+ G+++ H + I+HRD+K SNLL+ ++G +KIADFG++N F + L++ V T
Sbjct: 144 QDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPA 202
Query: 287 YRAPELLLGATDY--GVGIDLWSAGCLLAEMFLGR-PIMPGRT 326
+ APE L G +D+W+ G L G+ P M R
Sbjct: 203 FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 18/221 (8%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDT---SEPHSVKFMAREIMILQKL 181
E ++ +G+G++ V+ A + T + A+K +K D + + + ++ L
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-W 76
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLA-RIISNPEGKLTEPQ----QLLSGLQH 235
+HP + + T + + +L+ V E++ DL I S + L+ +++ GLQ
Sbjct: 77 EHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 134
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLA--NYFSPNKKRPLTSRVVTLWYRAPELL 293
H +GI++RD+K N+L+DK+G +KIADFG+ N K T Y APE+L
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCG---TPDYIAPEIL 191
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
LG Y +D WS G LL EM +G+ G+ E E H I
Sbjct: 192 LGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 22/202 (10%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDT--SEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+GTY VY D +A+K++ + D+ S+P + EI + + L H NIV+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-----LHEEIALHKHLKHKNIVQY 70
Query: 190 EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTE--------PQQLLSGLQHCHDRGI 241
G + S + + + L+ ++ + G L + +Q+L GL++ HD I
Sbjct: 71 LG-SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 242 LHRDVKGSNLLIDK-NGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELL-LGATD 298
+HRD+KG N+LI+ +GVLKI+DFG + + P T TL Y APE++ G
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEIIDKGPRG 187
Query: 299 YGVGIDLWSAGCLLAEMFLGRP 320
YG D+WS GC + EM G+P
Sbjct: 188 YGKAADIWSLGCTIIEMATGKP 209
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E + K+D++G+G++ VYK +D T ++VA+K + + +E + +EI +L + D P
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSP 77
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHD 238
I + G + L+++ E++ A + P G L E +++L GL + H
Sbjct: 78 YITRYFGSYLKSTK--LWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHS 134
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+HRD+K +N+L+ + G +K+ADFG+A + + + V T ++ APE ++ +
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-NXFVGTPFWMAPE-VIKQSA 192
Query: 299 YGVGIDLWSAGCLLAEMFLGRP 320
Y D+WS G E+ G P
Sbjct: 193 YDFKADIWSLGITAIELAKGEP 214
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%), Gaps = 30/223 (13%)
Query: 118 GLVPKSAESYDKID--------KVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEP 165
GLVP+ + + + + ++G+G + +V Y L +TG++VA+KK++ T E
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE- 71
Query: 166 HSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGK--- 222
++ REI IL+ L H NIVK +G+ S + +L L+ E++ R +
Sbjct: 72 -HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 223 ----LTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK---- 274
L Q+ G+++ + +HRD+ N+L++ +KI DFGL +K
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 275 -KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
K P S + WY APE L + + V D+WS G +L E+F
Sbjct: 191 VKEPGESPI--FWY-APE-SLTESKFSVASDVWSFGVVLYELF 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 34/225 (15%)
Query: 118 GLVPKSAESYDKID--------KVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEP 165
GLVP+ + + + + ++G+G + +V Y L +TG++VA+KK++ T E
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE- 71
Query: 166 HSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFM---------QTDLARII 216
++ REI IL+ L H NIVK +G+ S + +L L+ E++ Q RI
Sbjct: 72 -HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI- 129
Query: 217 SNPEGKLTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-- 274
+ L Q+ G+++ + +HRD+ N+L++ +KI DFGL +K
Sbjct: 130 -DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 188
Query: 275 ---KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
K P S + WY APE L + + V D+WS G +L E+F
Sbjct: 189 XKVKEPGESPI--FWY-APE-SLTESKFSVASDVWSFGVVLYELF 229
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDT---SEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G++ V+ A + T + A+K +K D + + + ++ L +HP + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTHM 83
Query: 190 EGLATSRMQYSLYLVFEFMQT-DLA-RIISNPEGKLTEPQ----QLLSGLQHCHDRGILH 243
T + + +L+ V E++ DL I S + L+ +++ GLQ H +GI++
Sbjct: 84 --FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVY 141
Query: 244 RDVKGSNLLIDKNGVLKIADFGLA--NYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
RD+K N+L+DK+G +KIADFG+ N K T Y APE+LLG Y
Sbjct: 142 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCG---TPDYIAPEILLGQK-YNH 197
Query: 302 GIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
+D WS G LL EM +G+ G+ E E H I
Sbjct: 198 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 20/210 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV---KFDTSEPHSVKFMAREIMILQKL 181
+ Y+ + +G+G +S V + ++R+TG+ A+K V KF +S S + + RE I L
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQ-TDLA-RIISNPEGKLTEPQ--------QLLS 231
HP+IV+L L T LY+VFEFM DL I+ + + Q+L
Sbjct: 84 KHPHIVEL--LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 232 GLQHCHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
L++CHD I+HRDVK +L+ + + +K+ FG+A + RV T +
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA-GGRVGTPHFM 200
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLG 318
APE ++ YG +D+W G +L + G
Sbjct: 201 APE-VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 26/203 (12%)
Query: 132 KVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H NIV
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIV 77
Query: 188 KLEGLATSRMQYSLYLVFEF---------MQTDLARIISNPEGKLTEPQQLLSGLQHCHD 238
K +G+ S + +L L+ EF +Q RI + L Q+ G+++
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI--DHIKLLQYTSQICKGMEYLGT 135
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPELL 293
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE-S 191
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 192 LTESKFSVASDVWSFGVVLYELF 214
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 75
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGK-------LTEPQQLLSGLQHCHD 238
IVK +G+ S + +L L+ E++ R + L Q+ G+++
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPELL 293
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE-S 191
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 192 LTESKFSVASDVWSFGVVLYELF 214
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 74
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 133
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 134 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 192
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 193 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 239
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 11/226 (4%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 192 LATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHRD 245
T + LY + + G E +++S L++ H +GI+HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRP-LTSRVVTLWYRAPELLLGATDYGVGID 304
+K N+L++++ ++I DFG A SP K+ S V T Y +PELL + D
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA-SKSSD 216
Query: 305 LWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
LW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 75
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 134
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 135 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 193
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 194 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 240
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 72
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 131
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 132 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 190
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 191 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 237
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 73
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 132
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 133 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 191
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 192 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 238
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLD 182
AE YD + +G+G + V + + K+ A+K + KF+ + F E I+ +
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFM-QTDLARIISN---PE--GKLTEPQQLLSGLQHC 236
P +V+L + LY+V E+M DL ++SN PE K + +L+ L
Sbjct: 134 SPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLA-LDAI 190
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL-- 294
H G++HRDVK N+L+DK+G LK+ADFG + V T Y +PE+L
Sbjct: 191 HSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQ 250
Query: 295 -GATDYGVGIDLWSAGCLLAEMFLG 318
G YG D WS G L EM +G
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 98
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP-LTSRVVTLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ S V T Y +PELL +
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS- 216
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 213
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 72
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGK-------LTEPQQLLSGLQHCHD 238
IVK +G+ S + +L L+ E++ R + L Q+ G+++
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPELL 293
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE-S 188
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 189 LTESKFSVASDVWSFGVVLYELF 211
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 213
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 98
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 216
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 75
Query: 186 IVKLEGLATSRMQYSLYLVFEFM---------QTDLARIISNPEGKLTEPQQLLSGLQHC 236
IVK +G+ S + +L L+ E++ Q RI + L Q+ G+++
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL 133
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPE 291
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE 190
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 191 -SLTESKFSVASDVWSFGVVLYELF 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 71
Query: 186 IVKLEGLATSRMQYSLYLVFEFM---------QTDLARIISNPEGKLTEPQQLLSGLQHC 236
IVK +G+ S + +L L+ E++ Q RI + L Q+ G+++
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL 129
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPE 291
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE 186
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 187 -SLTESKFSVASDVWSFGVVLYELF 210
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSS- 213
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 79
Query: 186 IVKLEGLATSRMQYSLYLVFEFM---------QTDLARIISNPEGKLTEPQQLLSGLQHC 236
IVK +G+ S + +L L+ E++ Q RI + L Q+ G+++
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL 137
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPE 291
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE 194
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 195 -SLTESKFSVASDVWSFGVVLYELF 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 77
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGK-------LTEPQQLLSGLQHCHD 238
IVK +G+ S + +L L+ E++ R + L Q+ G+++
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPELL 293
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE-S 193
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 194 LTESKFSVASDVWSFGVVLYELF 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 72
Query: 186 IVKLEGLATSRMQYSLYLVFEFM---------QTDLARIISNPEGKLTEPQQLLSGLQHC 236
IVK +G+ S + +L L+ E++ Q RI + L Q+ G+++
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL 130
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPE 291
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE 187
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 188 -SLTESKFSVASDVWSFGVVLYELF 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 103
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGK-------LTEPQQLLSGLQHCHD 238
IVK +G+ S + +L L+ E++ R + L Q+ G+++
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPELL 293
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE-S 219
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 220 LTESKFSVASDVWSFGVVLYELF 242
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 70
Query: 186 IVKLEGLATSRMQYSLYLVFEFM---------QTDLARIISNPEGKLTEPQQLLSGLQHC 236
IVK +G+ S + +L L+ E++ Q RI + L Q+ G+++
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL 128
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPE 291
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE 185
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 186 -SLTESKFSVASDVWSFGVVLYELF 209
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 76
Query: 186 IVKLEGLATSRMQYSLYLVFEFM---------QTDLARIISNPEGKLTEPQQLLSGLQHC 236
IVK +G+ S + +L L+ E++ Q RI + L Q+ G+++
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL 134
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPE 291
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE 191
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 192 -SLTESKFSVASDVWSFGVVLYELF 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 78
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGK-------LTEPQQLLSGLQHCHD 238
IVK +G+ S + +L L+ E++ R + L Q+ G+++
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPELL 293
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APE-S 194
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 195 LTESKFSVASDVWSFGVVLYELF 217
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 94
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS- 212
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 72
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGK-------LTEPQQLLSGLQHCHD 238
IVK +G+ S + +L L+ E++ R + L Q+ G+++
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPELL 293
+ +HRD+ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI--FWY-APE-S 188
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 189 LTESKFSVASDVWSFGVVLYELF 211
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 79
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 138
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 139 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 197
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 244
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 94
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 212
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 111/212 (52%), Gaps = 13/212 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF-MAREIMILQKLDHPNIVKLEG 191
+G+G + NVY A ++ + IVALK + E V+ + REI I L HPNI++L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 192 LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKL-TEPQQLLSGLQHCHDRGILHRD 245
R + +YL+ E+ + +L + + E + T ++L L +CH + ++HRD
Sbjct: 91 YFYDRRR--IYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRD 148
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NLL+ G LKIADFG + + +P+ +R + TL Y PE++ G + +DL
Sbjct: 149 IKPENLLLGLKGELKIADFGWSVH-APSLRR--KTMCGTLDYLPPEMIEGRM-HNEKVDL 204
Query: 306 WSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
W G L E+ +G P + E RI K+
Sbjct: 205 WCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSS- 215
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 22/230 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALK--KVKFDTSEPHSVKFMA----REIMIL 178
+ YD D +G+G S V + + R TG A+K +V + P ++ + RE IL
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 179 QKLD-HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLS 231
+++ HP+I+ L + + ++LVF+ M+ + L+E + LL
Sbjct: 154 RQVAGHPHIITL--IDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLE 211
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
+ H I+HRD+K N+L+D N ++++DFG + + P +K L T Y APE
Sbjct: 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPE 269
Query: 292 LLLGATD-----YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
+L + D YG +DLW+ G +L + G P R ++ L I +
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME 319
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 13/214 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 100
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 159
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 160 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 218
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKL 337
DLW+ GC++ ++ G P E +I KL
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 252
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
T + LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 213
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 17/230 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ Y +++G+G +S V + + TG+ A K + + + RE I + L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 185 NIVKLEGLATSRMQYSLYLVF------EFMQTDLARIISNPEGKLTEPQQLLSGLQHCHD 238
NIV+L + + YLVF E + +AR + QQ+L + HCH
Sbjct: 64 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 239 RGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
GI+HRD+K NLL+ K +K+ADFGLA +++ T Y +PE +L
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLSPE-VLR 179
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
YG +D+W+ G +L + +G P E HR+++ + + D+
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDF 225
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 31/265 (11%)
Query: 131 DKVGQGTYSNVYKALDRDT--GKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
D +G+G+Y V + LD +T + V + K K P+ + +EI +L++L H N+++
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 189 LEGLATSRMQYSLYLVFEFMQTDLARII-SNPEGKLTEPQ------QLLSGLQHCHDRGI 241
L + + + +Y+V E+ + ++ S PE + Q QL+ GL++ H +GI
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI 130
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV--TLWYRAPELLLGATDY 299
+H+D+K NLL+ G LKI+ G+A P T R + ++ PE+ G +
Sbjct: 131 VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD-TCRTSQGSPAFQPPEIANGLDTF 189
Query: 300 -GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK-----------LCGSPSEDYWK 347
G +D+WSAG L + G + P E + ++++F+ CG P D K
Sbjct: 190 SGFKVDIWSAGVTLYNITTG--LYP--FEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLK 245
Query: 348 KLRLSTTFRPPQSYKPRLFEAFSEF 372
+ + P + + R S F
Sbjct: 246 GM---LEYEPAKRFSIRQIRQHSWF 267
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 128 DKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
D K+G+G+ V A ++ +G+ VA+K + + + F E++I++ H N+V
Sbjct: 48 DSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF--NEVVIMRDYQHFNVV 105
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----TDL-ARIISNPEGKLTEPQQLLSGLQHCHDRGIL 242
E + + L+++ EF+Q TD+ +++ N E T + +L L + H +G++
Sbjct: 106 --EMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVI 163
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLANYFSPN--KKRPLTSRVVTLWYRAPELLLGATDYG 300
HRD+K ++L+ +G +K++DFG S + K++ L T ++ APE ++ + Y
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVG---TPYWMAPE-VISRSLYA 219
Query: 301 VGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
+D+WS G ++ EM G P + V+ + R+
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL 253
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 13/227 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++S V A + T + A+K + K + + V ++ RE ++ +LDHP VKL
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 102
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHCHDRGILHR 244
+ LY + + +L + I G E +++S L++ H +GI+HR
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 161
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDYGVGI 303
D+K N+L++++ ++I DFG A SP K+ + V T Y +PELL +
Sbjct: 162 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 220
Query: 304 DLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLR 350
DLW+ GC++ ++ G P E +I KL E ++ K R
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 267
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+ ++G+G + +V Y L +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 73
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGK-------LTEPQQLLSGLQHCHD 238
IVK +G+ S + +L L+ E++ R + L Q+ G+++
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPELL 293
+ +HR++ N+L++ +KI DFGL +K K P S + WY APE
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI--FWY-APE-S 189
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
L + + V D+WS G +L E+F
Sbjct: 190 LTESKFSVASDVWSFGVVLYELF 212
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
D +G GT+ V TG VA+K + + V + REI L+ HP+I+KL
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 190 EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDRGILH 243
+ ++ +++V E++ G+L E QQ+LSG+ +CH ++H
Sbjct: 82 YQVIST--PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVH 139
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+K N+L+D + KIADFGL+N S + L + Y APE++ G G +
Sbjct: 140 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRXSCGSPNYAAPEVISGRLYAGPEV 197
Query: 304 DLWSAGCLLAEMFLG 318
D+WS+G +L + G
Sbjct: 198 DIWSSGVILYALLCG 212
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-----TDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +K+ADFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 15/237 (6%)
Query: 110 NIPREVLAGLVPKSAESYDKIDKVGQGTYSNVY---KALDRDTGKIVALKKVKFDTSEPH 166
+I V AG ++ + +GQG++ V+ K D+G + A+K +K T +
Sbjct: 13 SITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVR 72
Query: 167 SVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTE 225
E IL ++HP +VKL + + LYL+ +F++ DL +S E TE
Sbjct: 73 DRVRTKMERDILADVNHPFVVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTE 129
Query: 226 PQ------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLT 279
+L GL H H GI++RD+K N+L+D+ G +K+ DFGL+ ++K+
Sbjct: 130 EDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY- 188
Query: 280 SRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
S T+ Y APE ++ + D WS G L+ EM G G+ E + I K
Sbjct: 189 SFCGTVEYMAPE-VVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILK 244
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 17/230 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ Y +++G+G +S V + + TG+ A K + + + RE I + L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 185 NIVKLEGLATSRMQYSLYLVF------EFMQTDLARIISNPEGKLTEPQQLLSGLQHCHD 238
NIV+L + + YLVF E + +AR + QQ+L + HCH
Sbjct: 64 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 239 RGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
GI+HRD+K NLL+ K +K+ADFGLA +++ T Y +PE +L
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLSPE-VLR 179
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
YG +D+W+ G +L + +G P E HR+++ + + D+
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDF 225
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +K+ADFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLD 182
AE Y+ + +G+G + V + T K+ A+K + KF+ + F E I+ +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFM-QTDLARIISN---PE--GKLTEPQQLLSGLQHC 236
P +V+L A +Y LY+V E+M DL ++SN PE + + +L+ L
Sbjct: 133 SPWVVQL-FYAFQDDRY-LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA-LDAI 189
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL-- 294
H G +HRDVK N+L+DK+G LK+ADFG + + V T Y +PE+L
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 249
Query: 295 -GATDYGVGIDLWSAGCLLAEMFLG 318
G YG D WS G L EM +G
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQ-----TDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +K+ADFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLD 182
AE Y+ + +G+G + V + T K+ A+K + KF+ + F E I+ +
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFM-QTDLARIISN---PE--GKLTEPQQLLSGLQHC 236
P +V+L A +Y LY+V E+M DL ++SN PE + + +L+ L
Sbjct: 128 SPWVVQL-FYAFQDDRY-LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA-LDAI 184
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL-- 294
H G +HRDVK N+L+DK+G LK+ADFG + + V T Y +PE+L
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 244
Query: 295 -GATDYGVGIDLWSAGCLLAEMFLG 318
G YG D WS G L EM +G
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLD 182
AE Y+ + +G+G + V + T K+ A+K + KF+ + F E I+ +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFM-QTDLARIISN---PE--GKLTEPQQLLSGLQHC 236
P +V+L A +Y LY+V E+M DL ++SN PE + + +L+ L
Sbjct: 133 SPWVVQL-FYAFQDDRY-LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA-LDAI 189
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL-- 294
H G +HRDVK N+L+DK+G LK+ADFG + + V T Y +PE+L
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 249
Query: 295 -GATDYGVGIDLWSAGCLLAEMFLG 318
G YG D WS G L EM +G
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 136/285 (47%), Gaps = 38/285 (13%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E + K++++G+G++ V+K +D T ++VA+K + + +E + +EI +L + D
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSS 81
Query: 185 NIVKLEGLATSRMQYS-LYLVFEFM----QTDLARIISNPEGKL-TEPQQLLSGLQHCHD 238
+ K G S ++ S L+++ E++ DL R E ++ T +++L GL + H
Sbjct: 82 YVTKYYG---SYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHS 138
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+HRD+K +N+L+ + G +K+ADFG+A + + + + V T ++ APE ++ +
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-NTFVGTPFWMAPE-VIQQSA 196
Query: 299 YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRPP 358
Y D+WS G E+ G P P+ D + F P
Sbjct: 197 YDSKADIWSLGITAIELAKGEP--------------------PNSDMHP---MRVLFLIP 233
Query: 359 QSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
++ P L +F + DP++R +A LK++F
Sbjct: 234 KNNPPTL---VGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 122 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 178
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K + T Y APE++L +
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGATWTLCGTPEYLAPEIIL-S 233
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 329
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 330 VVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 386
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 445
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 487
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 192 LATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM + R N L Q+ S +++ + +H
Sbjct: 78 VCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKS 194
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 195 DVWAFGVLLWEI 206
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 75 VCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKS 191
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 192 DVWAFGVLLWEI 203
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 118 GLVPKSAESYDKID----------KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHS 167
G + S+ +YDK + K+G G Y VY+ + + VA+K +K DT E
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--- 57
Query: 168 VKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT--------DLARIISNP 219
V+ +E +++++ HPN+V+L G+ T + Y++ EFM + R N
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNA 115
Query: 220 EGKLTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLT 279
L Q+ S +++ + +HRD+ N L+ +N ++K+ADFGL+ + +
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 175
Query: 280 SRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEM 315
+ + APE L + + D+W+ G LL E+
Sbjct: 176 GAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 77 VCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 192 LATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM + R N L Q+ S +++ + +H
Sbjct: 82 VCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 198
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 199 DVWAFGVLLWEI 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 77 VCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 17/228 (7%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
Y +++G+G +S V + + G+ A K + + + RE I + L HPNI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 187 VKLEGLATSRMQYSLYLVF------EFMQTDLARIISNPEGKLTEPQQLLSGLQHCHDRG 240
V+L + + YL+F E + +AR + QQ+L + HCH G
Sbjct: 84 VRLHDSISEEGHH--YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 241 ILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
++HRD+K NLL+ K +K+ADFGLA +++ T Y +PE +L
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPE-VLRKD 199
Query: 298 DYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
YG +DLW+ G +L + +G P E HR+++ + + D+
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDF 243
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 118 GLVPKSAESYDKID----------KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHS 167
G + S+ +YDK + K+G G Y VY+ + + VA+K +K DT E
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--- 57
Query: 168 VKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQ----TDLARIISNPEGK- 222
V+ +E +++++ HPN+V+L G+ T + Y++ EFM D R + E
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSA 115
Query: 223 ---LTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLT 279
L Q+ S +++ + +HRD+ N L+ +N ++K+ADFGL+ + +
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 280 SRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEM 315
+ + APE L + + D+W+ G LL E+
Sbjct: 176 GAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 118 GLVPKSAESYDKID----------KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHS 167
G + S+ +YDK + K+G G Y VY+ + + VA+K +K DT E
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--- 57
Query: 168 VKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT--------DLARIISNP 219
V+ +E +++++ HPN+V+L G+ T + Y++ EFM + R N
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNA 115
Query: 220 EGKLTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLT 279
L Q+ S +++ + +HRD+ N L+ +N ++K+ADFGL+ + +
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 280 SRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEM 315
+ + APE L + + D+W+ G LL E+
Sbjct: 176 GAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 16 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 69
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 70 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 186
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 187 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 242
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 243 EELY-QLMRLCWKERP 257
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 80
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 81 VVSEE---PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 18 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 71
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 72 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 188
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 189 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 244
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 245 EELY-QLMRLCWKERP 259
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPEL 292
H +++RD+K NLLID+ G +++ DFG A + + R TL Y APE+
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWTLCGTPEYLAPEI 210
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 211 IL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 246
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 247 VVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKS 362
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 404
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 246
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 247 VVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKS 362
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 404
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V ++TG A+K + K + ++ E ILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NL+ID+ G +K+ DFG F+ K T Y APE++L +
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 213
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 77 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 192 LATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM + R N L Q+ S +++ + +H
Sbjct: 81 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 197
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 198 DVWAFGVLLWEI 209
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V ++TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 192 LATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM + R N L Q+ S +++ + +H
Sbjct: 82 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 198
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 199 DVWAFGVLLWEI 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 10 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 63
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 64 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 181 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 236
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 237 EELY-QLMRLCWKERP 251
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPEL 292
H +++RD+K NL+ID+ G +K+ DFGLA + + R L Y APE+
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLA--------KRVKGRTWXLCGTPEYLAPEI 209
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 19 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 72
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 73 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 190 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 245
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 246 EELY-QLMRLCWKERP 260
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 20 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 73
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 74 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 130
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 131 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 190
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 191 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 246
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 247 EELY-QLMRLCWKERP 261
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 77 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 31/212 (14%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
+ +I+ +G G + V+KA R GK +K+VK++ + RE+ L KLDH NI
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE------REVKALAKLDHVNI 66
Query: 187 VKLEGL--------ATSRMQYS------LYLVFEFM-QTDLARIISNPEGK-------LT 224
V G TS S L++ EF + L + I G+ L
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 225 EPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVT 284
+Q+ G+ + H + +++RD+K SN+ + +KI DFGL + KR + T
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKG--T 184
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
L Y +PE + + DYG +DL++ G +LAE+
Sbjct: 185 LRYMSPE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 192 LATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM + R N L Q+ S +++ + +H
Sbjct: 79 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 195
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 196 DVWAFGVLLWEI 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 192 LATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM + R N L Q+ S +++ + +H
Sbjct: 323 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
R++ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 439
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 440 DVWAFGVLLWEI 451
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 80
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 81 VVSEE---PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 112/220 (50%), Gaps = 19/220 (8%)
Query: 112 PREVLAGLVPKSAESYDKIDKV-GQGTYSNVYKALDRDTGK---IVALKKVKFDTSEPHS 167
P E + + SY KI++V G G + V + + GK VA+K +K +E
Sbjct: 2 PNEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR 61
Query: 168 VKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD-LARIISNPEGKLTEP 226
+F++ E I+ + +HPNI++LEG+ T+ M + ++ EFM+ L + +G+ T
Sbjct: 62 REFLS-EASIMGQFEHPNIIRLEGVVTNSM--PVMILTEFMENGALDSFLRLNDGQFTVI 118
Query: 227 QQ------LLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL-T 279
Q + SG+++ + +HRD+ N+L++ N V K++DFGL+ + N P T
Sbjct: 119 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 280 SRV---VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
S + + + + APE + + D WS G ++ E+
Sbjct: 179 SSLGGKIPIRWTAPE-AIAFRKFTSASDAWSYGIVMWEVM 217
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 213
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLAGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 78 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE-SLAYNKFSIKS 194
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 195 DVWAFGVLLWEI 206
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 90 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 206
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 207 DVWAFGVLLWEI 218
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V ++TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 12 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 65
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 66 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 183 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 238
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 239 EELY-QLMRLCWKERP 253
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V ++TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 79 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE-SLAYNKFSIKS 195
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 196 DVWAFGVLLWEI 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 192 LATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM + R N L Q+ S +++ + +H
Sbjct: 77 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 11 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 64
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 65 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 182 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 237
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 238 EELY-QLMRLCWKERP 252
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 79 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 195
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 196 DVWAFGVLLWEI 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 37/257 (14%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFD-TSEPHSVKFMAREIMIL- 178
P + +D + +G+G+Y+ V + T +I A+K VK + ++ + ++ E +
Sbjct: 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 179 QKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSG 232
Q +HP +V L + + + L+ V E++ + KL E ++
Sbjct: 65 QASNHPFLVGLH--SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 122
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVV-TLWYRA 289
L + H+RGI++RD+K N+L+D G +K+ D+G+ RP TS T Y A
Sbjct: 123 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTTSXFCGTPNYIA 178
Query: 290 PELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP------SE 343
PE+L G DYG +D W+ G L+ EM GR F + GS +E
Sbjct: 179 PEILRGE-DYGFSVDWWALGVLMFEMMAGR-------------SPFDIVGSSDNPDQNTE 224
Query: 344 DYWKKLRLSTTFRPPQS 360
DY ++ L R P+S
Sbjct: 225 DYLFQVILEKQIRIPRS 241
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V ++TG A+K + K + ++ E I Q ++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +K+ADFG F+ K T Y APE++L +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 213
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPEL 292
H +++RD+K NLLID+ G +++ DFG A + + R L Y APE+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXLXGTPEYLAPEI 209
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVY---KALDRDTGKIVALKKVK--FDTSEPHSVKFMAREIMILQ 179
E ++ + +G+G Y V+ K +TGKI A+K +K E IL+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGL 233
++ HP IV L + + LYL+ E++ + EG E ++ L
Sbjct: 77 EVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
H H +GI++RD+K N++++ G +K+ DFGL S + + T+ Y APE+L
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAPEIL 193
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
+ + + +D WS G L+ +M G P G + + +I K
Sbjct: 194 M-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 246
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 247 VVSEE---PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKS 362
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 404
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V ++TG A+K + K + ++ E ILQ ++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 122 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 178
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 233
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 87 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 143
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPEL 292
H +++RD+K NLLID+ G +++ DFG A + + R TL Y APE+
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWTLCGTPEYLAPEI 195
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 196 IL-SKGYNKAVDWWALGVLIYEMAAGYP 222
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 284 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
R++ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 400
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 401 DVWAFGVLLWEI 412
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 75 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE-SLAYNKFSIKS 191
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 192 DVWAFGVLLWEI 203
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V ++TG A+K + K + ++ E ILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 213
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 10 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 63
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 64 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 181 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 236
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 237 EELY-QLMRLCWKERP 251
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 77
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 78 VVSEE---PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 193
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V ++TG A+K + K + ++ E ILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 213
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 192 LATSRMQYSLYLVFEFM----QTDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T ++ Y+V E+M D R + E L Q+ S +++ + +H
Sbjct: 96 VCT--LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N V+K+ADFGL+ + + + + APE L T + +
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT-FSIKS 212
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 213 DVWAFGVLLWEI 224
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 16 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 69
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 70 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 186
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 187 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 242
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 243 EELY-QLMRLCWKERP 257
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 15 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 68
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 69 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 185
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 186 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 241
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 242 EELY-QLMRLCWKERP 256
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 19/197 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD-HPNIVKLEG 191
+G+G++S K + + + + A+K + E ++ K EI L+ + HPNIVKL
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS-KRMEANTQK----EITALKLCEGHPNIVKLHE 73
Query: 192 LATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEP----QQLLSGLQHCHDRGILHRD 245
+ ++ +LV E + RI TE ++L+S + H HD G++HRD
Sbjct: 74 VFHDQLH--TFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRD 131
Query: 246 VKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVG 302
+K NLL + N +KI DFG A P +PL + TL Y APE LL Y
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFAR-LKPPDNQPLKTPCFTLHYAAPE-LLNQNGYDES 189
Query: 303 IDLWSAGCLLAEMFLGR 319
DLWS G +L M G+
Sbjct: 190 CDLWSLGVILYTMLSGQ 206
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 77
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 78 VVSEE---PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGR-FTIKS 193
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 235
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 281 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 338
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
R++ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 397
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 398 DVWAFGVLLWEI 409
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V ++TG A+K + K + ++ E ILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 213
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G Y VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 192 LATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM + R N L Q+ S +++ + +H
Sbjct: 77 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 73
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 74 VVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 130
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 189
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 231
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 30/255 (11%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 5 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 58
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 59 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC--GSPS 342
A +YG + D+WS G LL E+ GR PG T ++ L R +++ +
Sbjct: 176 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 231
Query: 343 EDYWKKLRLSTTFRP 357
E+ ++ +RL RP
Sbjct: 232 EELYQLMRLCWKERP 246
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 17/204 (8%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
++ YD + +G G + D+ T ++VA+K ++ + +V+ REI+ + L H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ---REIINHRSLRH 75
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHC 236
PNIV+ + + + L ++ E+ +L I N G+ +E QQLLSG+ +C
Sbjct: 76 PNIVRFKEVILTPTH--LAIIMEYASGGELYERICN-AGRFSEDEARFFFQQLLSGVSYC 132
Query: 237 HDRGILHRDVKGSNLLIDKNGV--LKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL 294
H I HRD+K N L+D + LKI DFG + S +P S V T Y APE+LL
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQP-KSTVGTPAYIAPEVLL 190
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
G D+WS G L M +G
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G + V+ K VA+K +K + P + F+A E +++
Sbjct: 10 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 63
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 64 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA N+ + + APE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 181 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 236
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 237 EELY-QLMRLCWKERP 251
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 19/206 (9%)
Query: 126 SYDKIDKV-GQGTYSNVYKALDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKL 181
SY KI++V G G + V + + GK VA+K +K +E +F++ E I+ +
Sbjct: 14 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS-EASIMGQF 72
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTD-LARIISNPEGKLTEPQQ------LLSGLQ 234
+HPNI++LEG+ T+ M + ++ EFM+ L + +G+ T Q + SG++
Sbjct: 73 EHPNIIRLEGVVTNSM--PVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMR 130
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP-LTSRV---VTLWYRAP 290
+ + +HRD+ N+L++ N V K++DFGL+ + N P TS + + + + AP
Sbjct: 131 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMF 316
E + + D WS G ++ E+
Sbjct: 191 E-AIAFRKFTSASDAWSYGIVMWEVM 215
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V ++TG A+K + K + ++ E ILQ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 94 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 150
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 205
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 206 KGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 80
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 81 VVSEE---PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
D +G GT+ V + TG VA+K + + V + REI L+ HP+I+KL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 190 EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDRGILH 243
+ ++ + ++V E++ G++ E QQ+LS + +CH ++H
Sbjct: 77 YQVISTPTDF--FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVH 134
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+K N+L+D + KIADFGL+N S + L + + Y APE++ G G +
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEV 192
Query: 304 DLWSAGCLLAEMFLG 318
D+WS G +L + G
Sbjct: 193 DIWSCGVILYALLCG 207
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G + VY+ + + VA+K +K DT E V+ +E +++++ HPN+V+L G
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 192 LATSRMQYSLYLVFEFMQ----TDLARIISNPEGK----LTEPQQLLSGLQHCHDRGILH 243
+ T + Y++ EFM D R + E L Q+ S +++ + +H
Sbjct: 75 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N L+ +N ++K+ADFGL+ + + + + APE L + +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKS 191
Query: 304 DLWSAGCLLAEM 315
D+W+ G LL E+
Sbjct: 192 DVWAFGVLLWEI 203
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 17/230 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
E Y +++G+G +S V + + G+ A + + + RE I + L HP
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 185 NIVKLEGLATSRMQYSLYLVF------EFMQTDLARIISNPEGKLTEPQQLLSGLQHCHD 238
NIV+L + + YL+F E + +AR + QQ+L + HCH
Sbjct: 71 NIVRLHDSISEEGHH--YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 128
Query: 239 RGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
G++HR++K NLL+ K +K+ADFGLA +++ T Y +PE +L
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPE-VLR 186
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
YG +DLW+ G +L + +G P E HR+++ + + D+
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDF 232
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 15/223 (6%)
Query: 125 ESYDKIDKVGQGTYSNVY---KALDRDTGKIVALKKVK--FDTSEPHSVKFMAREIMILQ 179
E ++ + +G+G Y V+ K +TGKI A+K +K E IL+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGL 233
++ HP IV L + + LYL+ E++ + EG E ++ L
Sbjct: 77 EVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
H H +GI++RD+K N++++ G +K+ DFGL S + T+ Y APE+L
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHXFCGTIEYMAPEIL 193
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
+ + + +D WS G L+ +M G P G + + +I K
Sbjct: 194 M-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 88 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 144
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 145 HSLDLIYRDLKPENLLIDEQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 199
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 200 KGYNKAVDWWALGVLIYEMAAGYP 223
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NL+ID+ G +K+ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 80
Query: 192 LATSRMQYSLYLVFEFMQTD-LARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M L + GK L PQ Q+ SG+ + +H
Sbjct: 81 VVSEE---PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 80
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 81 VVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 69
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 70 VVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 185
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 227
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI + P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 71
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 72 VVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 187
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 229
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 119/253 (47%), Gaps = 37/253 (14%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFD-TSEPHSVKFMAREIMIL-QKLD 182
+ +D + +G+G+Y+ V + T +I A+K VK + ++ + ++ E + Q +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHC 236
HP +V L + + + L+ V E++ + KL E ++ L +
Sbjct: 80 HPFLVGLH--SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 137
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVV-TLWYRAPELL 293
H+RGI++RD+K N+L+D G +K+ D+G+ RP TS T Y APE+L
Sbjct: 138 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTTSXFCGTPNYIAPEIL 193
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP------SEDYWK 347
G DYG +D W+ G L+ EM GR P F + GS +EDY
Sbjct: 194 RGE-DYGFSVDWWALGVLMFEMMAGRS--P-----------FDIVGSSDNPDQNTEDYLF 239
Query: 348 KLRLSTTFRPPQS 360
++ L R P+S
Sbjct: 240 QVILEKQIRIPRS 252
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G ++ ++ D DT ++ A K V K +PH + M+ EI I + L H ++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 192 LATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRD 245
+++V E + + LTEP+ Q++ G Q+ H ++HRD
Sbjct: 89 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NL ++++ +KI DFGLA + +R T T Y APE +L + +D+
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE-VLSKKGHSFEVDV 204
Query: 306 WSAGCLLAEMFLGRP 320
WS GC++ + +G+P
Sbjct: 205 WSIGCIMYTLLVGKP 219
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
++G+G++ V++ D+ TG A+KKV+ + F A E+M L P IV L G
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-------FRAEELMACAGLTSPRIVPLYG 152
Query: 192 LATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRD 245
++++ E ++ + +G L E + Q L GL++ H R ILH D
Sbjct: 153 AVREGPWVNIFM--ELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 210
Query: 246 VKGSNLLIDKNGV-LKIADFGLANYFSPN--KKRPLTSRVV--TLWYRAPELLLGATDYG 300
VK N+L+ +G + DFG A P+ K LT + T + APE++LG +
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS-CD 269
Query: 301 VGIDLWSAGCLLAEMFLG 318
+D+WS+ C++ M G
Sbjct: 270 AKVDVWSSCCMMLHMLNG 287
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 39/247 (15%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
+ A +++I +GQG + V KA + + A+KK++ T E S + E+M+L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLST--ILSEVMLLASL 59
Query: 182 DHPNIVKLEGLATSRMQY-----------SLYLVFEFMQTDLARIISNPEGKLTEP---- 226
+H +V+ R + +L++ E+ + + + E +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 227 ---QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS------------ 271
+Q+L L + H +GI+HRD+K N+ ID++ +KI DFGLA
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 272 -PNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQ 330
P LTS + T Y A E+L G Y ID++S G + EM I P T +E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER 234
Query: 331 LHRIFKL 337
++ + KL
Sbjct: 235 VNILKKL 241
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPEL 292
H +++RD+K NL+ID+ G +++ DFGLA + + R L Y APE+
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLA--------KRVKGRTWXLCGTPEYLAPEI 209
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 26/260 (10%)
Query: 104 PKWLTDNIPREVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS 163
P + D R+ L+ +E +G+G S VY+ + T K ALK +K
Sbjct: 39 PDYWIDGSNRDALSDFFEVESE-------LGRGATSIVYRCKQKGTQKPYALKVLKKTVD 91
Query: 164 EPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKL 223
+ K + EI +L +L HPNI+KL+ + + + SL L RI+ +G
Sbjct: 92 K----KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVE--KGYY 145
Query: 224 TE------PQQLLSGLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNK 274
+E +Q+L + + H+ GI+HRD+K NLL + LKIADFGL+
Sbjct: 146 SERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EH 203
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLG-RPIMPGRTEVEQLHR 333
+ + + T Y APE+L G YG +D+WS G + + G P R + R
Sbjct: 204 QVLMKTVCGTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR 262
Query: 334 IFKLCGSPSEDYWKKLRLST 353
I +W ++ L+
Sbjct: 263 ILNCEYYFISPWWDEVSLNA 282
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ +M G P
Sbjct: 213 KGYNKAVDWWALGVLIYQMAAGYP 236
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G ++ ++ D DT ++ A K V K +PH + M+ EI I + L H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 192 LATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRD 245
+++V E + + LTEP+ Q++ G Q+ H ++HRD
Sbjct: 85 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NL ++++ +KI DFGLA + +R T T Y APE +L + +D+
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE-VLSKKGHSFEVDV 200
Query: 306 WSAGCLLAEMFLGRP 320
WS GC++ + +G+P
Sbjct: 201 WSIGCIMYTLLVGKP 215
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 39/247 (15%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
+ A +++I +GQG + V KA + + A+KK++ T E S + E+M+L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLST--ILSEVMLLASL 59
Query: 182 DHPNIVKLEGLATSRMQY-----------SLYLVFEFMQTDLARIISNPEGKLTEP---- 226
+H +V+ R + +L++ E+ + + + E +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 227 ---QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS------------ 271
+Q+L L + H +GI+HRD+K N+ ID++ +KI DFGLA
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 272 -PNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQ 330
P LTS + T Y A E+L G Y ID++S G + EM I P T +E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER 234
Query: 331 LHRIFKL 337
++ + KL
Sbjct: 235 VNILKKL 241
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G ++ ++ D DT ++ A K V K +PH + M+ EI I + L H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 192 LATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRD 245
+++V E + + LTEP+ Q++ G Q+ H ++HRD
Sbjct: 85 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 246 VKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDL 305
+K NL ++++ +KI DFGLA + +R T T Y APE +L + +D+
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE-VLSKKGHSFEVDV 200
Query: 306 WSAGCLLAEMFLGRP 320
WS GC++ + +G+P
Sbjct: 201 WSIGCIMYTLLVGKP 215
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 37/253 (14%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFD-TSEPHSVKFMAREIMIL-QKLD 182
+ +D + +G+G+Y+ V + T +I A+K VK + ++ + ++ E + Q +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHC 236
HP +V L + + + L+ V E++ + KL E ++ L +
Sbjct: 65 HPFLVGLH--SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 122
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP--LTSRVV-TLWYRAPELL 293
H+RGI++RD+K N+L+D G +K+ D+G+ RP TS T Y APE+L
Sbjct: 123 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP------SEDYWK 347
G DYG +D W+ G L+ EM M GR+ F + GS +EDY
Sbjct: 179 RGE-DYGFSVDWWALGVLMFEM------MAGRSP-------FDIVGSSDNPDQNTEDYLF 224
Query: 348 KLRLSTTFRPPQS 360
++ L R P+S
Sbjct: 225 QVILEKQIRIPRS 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
D +G GT+ V + TG VA+K + + V + REI L+ HP+I+KL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 190 EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDRGILH 243
+ ++ + ++V E++ G++ E QQ+LS + +CH ++H
Sbjct: 77 YQVISTPTDF--FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVH 134
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+K N+L+D + KIADFGL+N S + L + Y APE++ G G +
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRDSCGSPNYAAPEVISGRLYAGPEV 192
Query: 304 DLWSAGCLLAEMFLG 318
D+WS G +L + G
Sbjct: 193 DIWSCGVILYALLCG 207
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQ------QLLSG 232
P +VKLE + + +LY+V E+ M + L RI G+ EP Q++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 153
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
++ H +++RD+K NLLID+ G +++ DFG F+ K T Y APE+
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 209
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 15/197 (7%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G ++ ++ D DT ++ A K V K +PH + M+ EI I + L H ++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 192 LATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRD 245
+++V E + + LTEP+ Q++ G Q+ H ++HRD
Sbjct: 107 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 246 VKGSNLLIDKNGVLKIADFGLANY--FSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
+K NL ++++ +KI DFGLA + +K+ L T Y APE +L + +
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFEV 220
Query: 304 DLWSAGCLLAEMFLGRP 320
D+WS GC++ + +G+P
Sbjct: 221 DVWSIGCIMYTLLVGKP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 213
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 15/197 (7%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G ++ ++ D DT ++ A K V K +PH + M+ EI I + L H ++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 192 LATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRD 245
+++V E + + LTEP+ Q++ G Q+ H ++HRD
Sbjct: 109 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 246 VKGSNLLIDKNGVLKIADFGLANY--FSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
+K NL ++++ +KI DFGLA + +K+ L T Y APE +L + +
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFEV 222
Query: 304 DLWSAGCLLAEMFLGRP 320
D+WS GC++ + +G+P
Sbjct: 223 DVWSIGCIMYTLLVGKP 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQ------QLLSG 232
P +VKLE + + +LY+V E+ M + L RI G+ EP Q++
Sbjct: 122 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 174
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
++ H +++RD+K NLLID+ G +++ DFG F+ K T Y APE+
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 230
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 231 IL-SKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NL+ID+ G +++ DFG F+ K T Y APE+++ +
Sbjct: 158 HSLDLIYRDLKPENLIIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIII-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++K+ H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKIRHEKLVQLYA 80
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 81 VVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQ------QLLSG 232
P +VKLE + + +LY+V E+ M + L RI G+ EP Q++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 153
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
++ H +++RD+K NLLID+ G +++ DFG F+ K T Y APE+
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 209
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQ------QLLSG 232
P +VKLE + + +LY+V E+ M + L RI G+ EP Q++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 153
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
++ H +++RD+K NLLID+ G +++ DFG F+ K T Y APE+
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 209
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 42/271 (15%)
Query: 104 PKWLTDNIPREVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS 163
P+W +PRE L ++++G G + V+ K VA+K +K +
Sbjct: 2 PEW---EVPRETL-----------KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSM 46
Query: 164 EPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG- 221
P + F+A E ++++L H +V+L + T Q +Y++ E+M+ L + P G
Sbjct: 47 SPDA--FLA-EANLMKQLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGI 100
Query: 222 KLT------EPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKK 275
KLT Q+ G+ +R +HR+++ +N+L+ KIADFGLA N+
Sbjct: 101 KLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEY 160
Query: 276 RPLTSRVVTLWYRAPELLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---V 328
+ + APE A +YG + D+WS G LL E+ GR PG T +
Sbjct: 161 TAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
Query: 329 EQLHRIFKLC--GSPSEDYWKKLRLSTTFRP 357
+ L R +++ + E+ ++ +RL RP
Sbjct: 217 QNLERGYRMVRPDNCPEELYQLMRLCWKERP 247
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQ------QLLSG 232
P +VKLE + + +LY+V E+ M + L RI G+ EP Q++
Sbjct: 96 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 148
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
++ H +++RD+K NLLID+ G +++ DFG F+ K T Y APE+
Sbjct: 149 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 204
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 205 IL-SKGYNKAVDWWALGVLIYEMAAGYP 231
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 111/221 (50%), Gaps = 16/221 (7%)
Query: 128 DKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+ + ++G GT V+K R TG ++A+K+++ ++ + + + ++L+ D P IV
Sbjct: 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 188 KLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTE------PQQLLSGLQHCHDR-G 240
+ G T +++ E M T ++ +G + E ++ L + ++ G
Sbjct: 88 QCFG--TFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG 145
Query: 241 ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL----LGA 296
++HRDVK SN+L+D+ G +K+ DFG++ +K + ++ Y APE +
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA--YMAPERIDPPDPTK 203
Query: 297 TDYGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIFK 336
DY + D+WS G L E+ G+ P +T+ E L ++ +
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 37/253 (14%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFD-TSEPHSVKFMAREIMIL-QKLD 182
+ +D + +G+G+Y+ V + T +I A++ VK + ++ + ++ E + Q +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHC 236
HP +V L + + + L+ V E++ + KL E ++ L +
Sbjct: 112 HPFLVGLH--SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 169
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP---LTSRVVTLWYRAPELL 293
H+RGI++RD+K N+L+D G +K+ D+G+ RP ++ T Y APE+L
Sbjct: 170 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTTSTFCGTPNYIAPEIL 225
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP------SEDYWK 347
G DYG +D W+ G L+ EM GR F + GS +EDY
Sbjct: 226 RGE-DYGFSVDWWALGVLMFEMMAGR-------------SPFDIVGSSDNPDQNTEDYLF 271
Query: 348 KLRLSTTFRPPQS 360
++ L R P+S
Sbjct: 272 QVILEKQIRIPRS 284
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 15/197 (7%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G ++ ++ D DT ++ A K V K +PH + M+ EI I + L H ++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 192 LATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRD 245
+++V E + + LTEP+ Q++ G Q+ H ++HRD
Sbjct: 83 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 246 VKGSNLLIDKNGVLKIADFGLANY--FSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
+K NL ++++ +KI DFGLA + +K+ L T Y APE +L + +
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFEV 196
Query: 304 DLWSAGCLLAEMFLGRP 320
D+WS GC++ + +G+P
Sbjct: 197 DVWSIGCIMYTLLVGKP 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 80
Query: 192 LATSRMQYSLYLVFEFMQTD-LARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M L + GK L PQ Q+ SG+ + +H
Sbjct: 81 VVSEE---PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ Y + +G+G +S V + + TG A K + + + RE I + L H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 185 NIVKLEGLATSRMQYSLYLVF------EFMQTDLARIISNPEGKLTEPQQLLSGLQHCHD 238
NIV+L + + YLVF E + +AR + QQ+L + HCH
Sbjct: 64 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 239 RGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
G++HRD+K NLL+ K +K+ADFGLA +++ T Y +PE+L
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLSPEVLRK 180
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRP 320
YG +D+W+ G +L + +G P
Sbjct: 181 EA-YGKPVDIWACGVILYILLVGYP 204
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
++G+G++ V++ D+ TG A+KKV+ + F A E+M L P IV L G
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-------FRAEELMACAGLTSPRIVPLYG 133
Query: 192 LATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRD 245
++++ E ++ + +G L E + Q L GL++ H R ILH D
Sbjct: 134 AVREGPWVNIFM--ELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 191
Query: 246 VKGSNLLIDKNGV-LKIADFGLANYFSPN--KKRPLTSRVV--TLWYRAPELLLGATDYG 300
VK N+L+ +G + DFG A P+ K LT + T + APE++LG +
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS-CD 250
Query: 301 VGIDLWSAGCLLAEMFLG 318
+D+WS+ C++ M G
Sbjct: 251 AKVDVWSSCCMMLHMLNG 268
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 113/245 (46%), Gaps = 27/245 (11%)
Query: 122 KSAESYDKI----DKVGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREI 175
K AE KI + +G G +S V A ++ TGK+ A+K + K + S++ EI
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE---NEI 71
Query: 176 MILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEP------Q 227
+L+K+ H NIV LE + S LYLV + + RI+ +G TE +
Sbjct: 72 AVLRKIKHENIVALEDIYESPNH--LYLVMQLVSGGELFDRIVE--KGFYTEKDASTLIR 127
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVT 284
Q+L + + H GI+HRD+K NLL D+ + I+DFGL+ K +++ T
Sbjct: 128 QVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGT 185
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSED 344
Y APE +L Y +D WS G + + G P + + +I K
Sbjct: 186 PGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSP 244
Query: 345 YWKKL 349
YW +
Sbjct: 245 YWDDI 249
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ ++KI ++G G V+K + +G ++A K + + +P + RE+ +L + + P
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 126
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS--------GLQHC 236
IV G S + S+ + E M + G++ P+Q+L GL +
Sbjct: 127 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYL 182
Query: 237 HDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
++ I+HRDVK SN+L++ G +K+ DFG++ + S V T Y +PE L G
Sbjct: 183 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG 239
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR-PIMP 323
T Y V D+WS G L EM +GR PI P
Sbjct: 240 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 80
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 81 VVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV---KF---DTSEPHSVKFMAREIMILQKLDHPNI 186
+G G V A +R T K VA+K + KF E + EI IL+KL+HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 187 VKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ----QLLSGLQHCHDRG 240
+K++ + Y+V E M+ +++ N K + Q+L +Q+ H+ G
Sbjct: 78 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 134
Query: 241 ILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPELL 293
I+HRD+K N+L+ +++ ++KI DFG + TS + TL Y APE+L
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------TSLMRTLCGTPTYLAPEVL 188
Query: 294 --LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+G Y +D WS G +L G P
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYP 217
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++ V A + T ++ A+K +K D + V+ E +L LD P + +
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT-QL 85
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQLLS------GLQHCHDRGILHR 244
+ + LY V E++ DL I GK EPQ + GL H RGI++R
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISIGLFFLHKRGIIYR 144
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELLLGATDYGVG 302
D+K N+++D G +KIADFG+ + +T+R T Y APE ++ YG
Sbjct: 145 DLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGTPDYIAPE-IIAYQPYGKS 200
Query: 303 IDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
+D W+ G LL EM G+P G E E I +
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 29/244 (11%)
Query: 153 VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-D 211
VA+K +K +E F++ E I+ + DHPNI++LEG+ T R + ++ +V E+M+
Sbjct: 80 VAIKALKAGYTERQRRDFLS-EASIMGQFDHPNIIRLEGVVT-RGRLAM-IVTEYMENGS 136
Query: 212 LARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFG 265
L + +G+ T Q + +G+++ D G +HRD+ N+L+D N V K++DFG
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 266 LANYF--SPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFL--GRPI 321
L+ P+ T + + + APE + T + D+WS G ++ E+ RP
Sbjct: 197 LSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPY 255
Query: 322 --MPGR---TEVEQLHRIFKLCGSPSE------DYWKKLRLSTTFRPPQSYKPRLFEAFS 370
M R + VE+ +R+ G P D W K R RP S + +A
Sbjct: 256 WNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQ---RPRFSQIVSVLDALI 312
Query: 371 EFPE 374
PE
Sbjct: 313 RSPE 316
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NL+ID+ G +++ DFG F+ K T Y APE++L +
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV---KF---DTSEPHSVKFMAREIMILQKLDHPNI 186
+G G V A +R T K VA+K + KF E + EI IL+KL+HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 187 VKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ----QLLSGLQHCHDRG 240
+K++ + Y+V E M+ +++ N K + Q+L +Q+ H+ G
Sbjct: 78 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 134
Query: 241 ILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPELL 293
I+HRD+K N+L+ +++ ++KI DFG + TS + TL Y APE+L
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------TSLMRTLCGTPTYLAPEVL 188
Query: 294 --LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+G Y +D WS G +L G P
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYP 217
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFD-TSEPHSVKFMAREIMILQKL 181
S + + + +G G++ V+ R G+ A+K +K + V+ E ++L +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIIS------NPEGKLTEPQQLLSGLQ 234
HP I+++ G Q ++++ ++++ +L ++ NP K + L+ L+
Sbjct: 64 THPFIIRMWGTFQDAQQ--IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA-LE 120
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL 294
+ H + I++RD+K N+L+DKNG +KI DFG A Y P+ L T Y APE ++
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY-VPDVTYXLCG---TPDYIAPE-VV 175
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
Y ID WS G L+ EM G
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG F+ K T Y AP ++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPAIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 26/205 (12%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
I ++G+G + +V Y L +TG +VA+K+++ S P + REI IL+ L
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDF 72
Query: 186 IVKLEGLATSRMQYSLYLVFE---------FMQTDLARIISNPEGKLTEPQQLLSGLQHC 236
IVK G++ + SL LV E F+Q AR+ + L Q+ G+++
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL 130
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPE 291
R +HRD+ N+L++ +KIADFGLA +K + P S + WY APE
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI--FWY-APE 187
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMF 316
L + D+WS G +L E+F
Sbjct: 188 -SLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV---KF---DTSEPHSVKFMAREIMILQKLDHPNI 186
+G G V A +R T K VA+K + KF E + EI IL+KL+HP I
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 187 VKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ----QLLSGLQHCHDRG 240
+K++ + Y+V E M+ +++ N K + Q+L +Q+ H+ G
Sbjct: 77 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 133
Query: 241 ILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPELL 293
I+HRD+K N+L+ +++ ++KI DFG + TS + TL Y APE+L
Sbjct: 134 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------TSLMRTLCGTPTYLAPEVL 187
Query: 294 --LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+G Y +D WS G +L G P
Sbjct: 188 VSVGTAGYNRAVDCWSLGVILFICLSGYP 216
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 129 KIDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+I +G+G + V Y +TG+ VA+K +K ++ H + + +EI IL+ L H
Sbjct: 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH-IADLKKEIEILRNLYHE 83
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQLLSGLQHCH------ 237
NIVK +G+ T + L+ EF+ + L + + K+ QQL +Q C
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLT--SRVVTLWYRAPELLLG 295
R +HRD+ N+L++ +KI DFGL +K+ R +++ APE L+
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 296 ATDYGVGIDLWSAGCLLAEMF 316
+ Y + D+WS G L E+
Sbjct: 204 SKFY-IASDVWSFGVTLHELL 223
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V ++TG A+K + K + ++ E ILQ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQ------QLLSG 232
P +VKLE + + +LY+V E+ M + L RI G+ EP Q++
Sbjct: 94 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 146
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
++ H +++RD+K NLLID+ G +++ DFG F+ K T Y APE+
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 202
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 203 IL-SKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQ------QLLSG 232
P +VKLE + + +LY+V E+ M + L RI G+ EP Q++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 153
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
++ H +++RD+K NL+ID+ G +K+ DFG F+ K T Y APE+
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 209
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV---KF---DTSEPHSVKFMAREIMILQKLDHPNI 186
+G G V A +R T K VA+K + KF E + EI IL+KL+HP I
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 187 VKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ----QLLSGLQHCHDRG 240
+K++ + Y+V E M+ +++ N K + Q+L +Q+ H+ G
Sbjct: 84 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 140
Query: 241 ILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPELL 293
I+HRD+K N+L+ +++ ++KI DFG + TS + TL Y APE+L
Sbjct: 141 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------TSLMRTLCGTPTYLAPEVL 194
Query: 294 --LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+G Y +D WS G +L G P
Sbjct: 195 VSVGTAGYNRAVDCWSLGVILFICLSGYP 223
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 20/228 (8%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ +++I ++G G V K R +G I+A K + + +P + RE+ +L + + P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 74
Query: 185 NIVKLEGLATSRMQYSLYL------VFEFMQTDLARIISNPEGKLTEPQQLLSGLQHCHD 238
IV G S + S+ + + + + RI GK++ +L GL + +
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVS--IAVLRGLAYLRE 132
Query: 239 R-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+ I+HRDVK SN+L++ G +K+ DFG++ + S V T Y APE L G T
Sbjct: 133 KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMAPERLQG-T 188
Query: 298 DYGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIFKLCGSPSED 344
Y V D+WS G L E+ +GR PI P + ++L IF G P D
Sbjct: 189 HYSVQSDIWSMGLSLVELAVGRYPIPP--PDAKELEAIF---GRPVVD 231
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 26/205 (12%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
I ++G+G + +V Y L +TG +VA+K+++ S P + REI IL+ L
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDF 73
Query: 186 IVKLEGLATSRMQYSLYLVFE---------FMQTDLARIISNPEGKLTEPQQLLSGLQHC 236
IVK G++ + SL LV E F+Q AR+ + L Q+ G+++
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL 131
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPE 291
R +HRD+ N+L++ +KIADFGLA +K + P S + WY APE
Sbjct: 132 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI--FWY-APE 188
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMF 316
L + D+WS G +L E+F
Sbjct: 189 -SLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV---KF---DTSEPHSVKFMAREIMILQKLDHPNI 186
+G G V A +R T K VA+K + KF E + EI IL+KL+HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 187 VKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ----QLLSGLQHCHDRG 240
+K++ + Y+V E M+ +++ N K + Q+L +Q+ H+ G
Sbjct: 78 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 134
Query: 241 ILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPELL 293
I+HRD+K N+L+ +++ ++KI DFG + TS + TL Y APE+L
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------TSLMRTLCGTPTYLAPEVL 188
Query: 294 --LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+G Y +D WS G +L G P
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYP 217
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P + KLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 102 PFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NL+ID+ G +K+ DFG F+ K T Y APE++L +
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 213
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 112/263 (42%), Gaps = 59/263 (22%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALK---KVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+GQG+Y V A++ T I A+K K K P V+ + E+ +++KL HPNI +L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 190 EGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEP------------------ 226
+ QY + LV E + L I + GK
Sbjct: 94 YEVYEDE-QY-ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 227 -----------------------QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGV--LKI 261
+Q+ S L + H++GI HRD+K N L N +K+
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKL 211
Query: 262 ADFGLANYF---SPNKKRPLTSRVVTLWYRAPELLLGATD-YGVGIDLWSAGCLLAEMFL 317
DFGL+ F + + +T++ T ++ APE+L + YG D WSAG LL + +
Sbjct: 212 VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM 271
Query: 318 GRPIMPGRTEVEQLHRIF--KLC 338
G PG + + + ++ KLC
Sbjct: 272 GAVPFPGVNDADTISQVLNKKLC 294
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 29/244 (11%)
Query: 153 VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-D 211
VA+K +K +E F++ E I+ + DHPNI++LEG+ T R + ++ +V E+M+
Sbjct: 80 VAIKALKAGYTERQRRDFLS-EASIMGQFDHPNIIRLEGVVT-RGRLAM-IVTEYMENGS 136
Query: 212 LARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFG 265
L + +G+ T Q + +G+++ D G +HRD+ N+L+D N V K++DFG
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 266 LANYF--SPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEM--FLGRPI 321
L+ P+ T + + + APE + T + D+WS G ++ E+ + RP
Sbjct: 197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPY 255
Query: 322 --MPGR---TEVEQLHRIFKLCGSPSE------DYWKKLRLSTTFRPPQSYKPRLFEAFS 370
M R + VE+ +R+ G P D W K R RP S + +A
Sbjct: 256 WNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQ---RPRFSQIVSVLDALI 312
Query: 371 EFPE 374
PE
Sbjct: 313 RSPE 316
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 26/205 (12%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
I ++G+G + +V Y L +TG +VA+K+++ S P + REI IL+ L
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDF 85
Query: 186 IVKLEGLATSRMQYSLYLVFE---------FMQTDLARIISNPEGKLTEPQQLLSGLQHC 236
IVK G++ + SL LV E F+Q AR+ + L Q+ G+++
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL 143
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNK-----KRPLTSRVVTLWYRAPE 291
R +HRD+ N+L++ +KIADFGLA +K + P S + WY APE
Sbjct: 144 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI--FWY-APE 200
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMF 316
L + D+WS G +L E+F
Sbjct: 201 -SLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 129 KIDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+I +G+G + V Y +TG+ VA+K +K ++ H + + +EI IL+ L H
Sbjct: 13 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH-IADLKKEIEILRNLYHE 71
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQLLSGLQHCH------ 237
NIVK +G+ T + L+ EF+ + L + + K+ QQL +Q C
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLT--SRVVTLWYRAPELLLG 295
R +HRD+ N+L++ +KI DFGL +K+ R +++ APE L+
Sbjct: 132 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 296 ATDYGVGIDLWSAGCLLAEMF 316
+ Y + D+WS G L E+
Sbjct: 192 SKFY-IASDVWSFGVTLHELL 211
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 44/225 (19%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
+ +I+ +G G + V+KA R GK +++VK++ + RE+ L KLDH NI
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE------REVKALAKLDHVNI 67
Query: 187 VKLEGL--------------------------ATSRMQY-SLYLVFEFM-QTDLARIISN 218
V G +SR + L++ EF + L + I
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 219 PEGK-------LTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS 271
G+ L +Q+ G+ + H + ++HRD+K SN+ + +KI DFGL
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 272 PNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
+ KR T TL Y +PE + + DYG +DL++ G +LAE+
Sbjct: 188 NDGKR--TRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P + KLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 102 PFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NL+ID+ G +K+ DFG F+ K T Y APE++L +
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 213
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 26/204 (12%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE--PHSVKFMAREIMILQKLDHPNIVKLE 190
+G G + VY+A G VA+K + D E +++ + +E + L HPNI+ L
Sbjct: 15 IGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 191 GLATSRMQYSLYLVFEFMQTD-LARIISN----PEGKLTEPQQLLSGLQHCHDRG---IL 242
G+ + +L LV EF + L R++S P+ + Q+ G+ + HD I+
Sbjct: 73 GVCLK--EPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 243 HRDVKGSNLLIDK--------NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL 294
HRD+K SN+LI + N +LKI DFGLA + K S + APE ++
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK---MSAAGAYAWMAPE-VI 186
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
A+ + G D+WS G LL E+ G
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ ++KI ++G G V+K + +G ++A K + + +P + RE+ +L + + P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 91
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS--------GLQHC 236
IV G S + S+ + E M + G++ P+Q+L GL +
Sbjct: 92 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYL 147
Query: 237 HDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
++ I+HRDVK SN+L++ G +K+ DFG++ + S V T Y +PE L G
Sbjct: 148 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG 204
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR-PIMP 323
T Y V D+WS G L EM +GR PI P
Sbjct: 205 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 20/225 (8%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
ES I ++G G + V+ K VA+K +K T P S E I++KL H
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTK-VAIKTLKPGTMSPES---FLEEAQIMKKLKHD 64
Query: 185 NIVKLEGLATSRMQYSLYLVFEFM-QTDLARIISNPEGK-------LTEPQQLLSGLQHC 236
+V+L + + +Y+V E+M + L + + EG+ + Q+ +G+ +
Sbjct: 65 KLVQLYAVVSEE---PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 121
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
+HRD++ +N+L+ + KIADFGLA N+ + + APE L
Sbjct: 122 ERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKL 337
+ + D+WS G LL E+ GR PG R +EQ+ R +++
Sbjct: 182 R-FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM 225
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
++ Y+ + +G G + D+ + ++VA+K ++ +VK REI+ + L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVK---REIINHRSLRH 74
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHC 236
PNIV+ + + + L +V E+ +L I N G+ +E QQL+SG+ +C
Sbjct: 75 PNIVRFKEVILTPTH--LAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYC 131
Query: 237 HDRGILHRDVKGSNLLIDKNGV--LKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL 294
H + HRD+K N L+D + LKI DFG + S +P S V T Y APE+LL
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQP-KSTVGTPAYIAPEVLL 189
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
G D+WS G L M +G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+G G + +V+ +R +G +K + D S+ + A EI +L+ LDHPNI+K+
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA-EIEVLKSLDHPNIIKI-- 85
Query: 192 LATSRMQYSLYLVFEFMQTD--LARIISN-------PEGKLTE-PQQLLSGLQHCHDRGI 241
+++Y+V E + L RI+S EG + E +Q+++ L + H + +
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 242 LHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
+H+D+K N+L + +KI DFGLA F ++ T+ T Y APE+ D
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGTALYMAPEVF--KRD 201
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
D+WSAG ++ + G
Sbjct: 202 VTFKCDIWSAGVVMYFLLTG 221
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
++ Y+ + +G G + D+ + ++VA+K ++ +VK REI+ + L H
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 73
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHC 236
PNIV+ + + + L +V E+ +L I N G+ +E QQL+SG+ +C
Sbjct: 74 PNIVRFKEVILTPTH--LAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYC 130
Query: 237 HDRGILHRDVKGSNLLIDKNGV--LKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL 294
H + HRD+K N L+D + LKI DFG + S +P S V T Y APE+LL
Sbjct: 131 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQP-KSTVGTPAYIAPEVLL 188
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
G D+WS G L M +G
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQ------QLLSG 232
P +VKLE + + +LY+V E+ M + L RI G+ EP Q++
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 154
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
++ H +++RD+K NLLID+ G +++ DFG F+ K T Y APE+
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 210
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 211 IL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKL 181
+ +D + +G+GT+ V ++ TG+ A+K ++ + V E +LQ
Sbjct: 6 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 65
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFE-----FMQTDLARIISNPEGKLTEPQQLLSGLQHC 236
HP + L+ + + + + F R+ + + +++S L++
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY-GAEIVSALEYL 124
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H R +++RD+K NL++DK+G +KI DFGL + + + T Y APE +L
Sbjct: 125 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPE-VLED 182
Query: 297 TDYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQ------QLLSG 232
P +VKLE + + +LY+V E+ M + L RI G+ EP Q++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 153
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
++ H +++RD+K NLLID+ G +++ DFG F+ K T Y APE+
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 209
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQ------QLLSG 232
P +VKLE + + +LY+V E+ M + L RI G+ EP Q++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 153
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
++ H +++RD+K NLLID+ G +++ DFG F+ K T Y APE+
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 209
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 35/225 (15%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
P Y + K+G G +S V+ A D VA+K V+ D + + EI +LQ+
Sbjct: 15 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE---DEIKLLQR 71
Query: 181 LDHPNIVKLEGLATSRMQ-------------YSLYLVFEFMQTDLARIISNPEGKLTE-- 225
++ + K + + + + + +VFE + +L +I E +
Sbjct: 72 VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 226 -----PQQLLSGLQHCHDR-GILHRDVKGSNLLID-----KNGV-LKIADFGLANYFSPN 273
+QLL GL + H R GI+H D+K N+L++ +N + +KIAD G A ++ +
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 274 KKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLG 318
+ +R YR+PE+LLGA +G G D+WS CL+ E+ G
Sbjct: 192 YTNSIQTRE----YRSPEVLLGAP-WGCGADIWSTACLIFELITG 231
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +D+I +G G++ V +++G A+K + K + ++ E ILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARI--ISNPEGKLTEPQQLLSGLQHC 236
P +VKLE + + +LY+V E+ M + L RI S P + Q +L+ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +++RD+K NLLID+ G +++ DFG A + L L APE++L +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWXLCGTPEAL---APEIIL-S 212
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRP 320
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 35/225 (15%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQK 180
P Y + K+G G +S V+ A D VA+K V+ D + + EI +LQ+
Sbjct: 15 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE---DEIKLLQR 71
Query: 181 LDHPNIVKLEGLATSRMQYSL-------------YLVFEFMQTDLARIISNPEGKLTE-- 225
++ + K + + + + L +VFE + +L +I E +
Sbjct: 72 VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 226 -----PQQLLSGLQHCHDR-GILHRDVKGSNLLID-----KNGV-LKIADFGLANYFSPN 273
+QLL GL + H R GI+H D+K N+L++ +N + +KIAD G A ++ +
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 274 KKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLG 318
+ +R YR+PE+LLGA +G G D+WS CL+ E+ G
Sbjct: 192 YTNSIQTRE----YRSPEVLLGAP-WGCGADIWSTACLIFELITG 231
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKL 181
+ +D + +G+GT+ V ++ TG+ A+K ++ + V E +LQ
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFE-----FMQTDLARIISNPEGKLTEPQQLLSGLQHC 236
HP + L+ + + + + F R+ + + +++S L++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY-GAEIVSALEYL 121
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H R +++RD+K NL++DK+G +KI DFGL + + + T Y APE +L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPE-VLED 179
Query: 297 TDYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ ++KI ++G G V+K + +G ++A K + + +P + RE+ +L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 64
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS--------GLQHC 236
IV G S + S+ + E M + G++ P+Q+L GL +
Sbjct: 65 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYL 120
Query: 237 HDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
++ I+HRDVK SN+L++ G +K+ DFG++ + S V T Y +PE L G
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG 177
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR-PIMP 323
T Y V D+WS G L EM +GR PI P
Sbjct: 178 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKL 181
+ +D + +G+GT+ V ++ TG+ A+K ++ + V E +LQ
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFE-----FMQTDLARIISNPEGKLTEPQQLLSGLQHC 236
HP + L+ + + + + F R+ + + +++S L++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY-GAEIVSALEYL 121
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H R +++RD+K NL++DK+G +KI DFGL + + + T Y APE +L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPE-VLED 179
Query: 297 TDYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 42/250 (16%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALK---KVKFDTSEPHSVKFMAREIMILQKL-DHPNIVK 188
+G+G + VY DTGK+ A+K K + + ++ R ++ L D P IV
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 189 LEGLATSRMQYSLY------LVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQH 235
M Y+ + + + M DL +S G +E +++ GL+H
Sbjct: 256 --------MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEH 306
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
H+R +++RD+K +N+L+D++G ++I+D GLA FS KK+P S V T Y APE+L
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHAS-VGTHGYMAPEVLQK 363
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y D +S GC+L ++ G H F+ + + ++ L+
Sbjct: 364 GVAYDSSADWFSLGCMLFKLLRG-------------HSPFRQHKTKDKHEIDRMTLTMAV 410
Query: 356 RPPQSYKPRL 365
P S+ P L
Sbjct: 411 ELPDSFSPEL 420
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 127 YDKIDKVGQGTYSNVY---KALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
++ + +GQG++ V+ K D ++ A+K +K T + E IL +++H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHC 236
P IVKL + + LYL+ +F++ DL +S E TE +L L H
Sbjct: 86 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHL 142
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H GI++RD+K N+L+D+ G +K+ DFGL+ S + ++ S T+ Y APE ++
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPE-VVNR 200
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
+ D WS G L+ EM G G+ E + I K
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K T P + +E +++KL H +V+L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 70
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + + +V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 71 VVSEE---PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 127
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGLA N+ + + APE L + +
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR-FTIKS 186
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 228
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 42/250 (16%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALK---KVKFDTSEPHSVKFMAREIMILQKL-DHPNIVK 188
+G+G + VY DTGK+ A+K K + + ++ R ++ L D P IV
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 189 LEGLATSRMQYSLY------LVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQH 235
M Y+ + + + M DL +S G +E +++ GL+H
Sbjct: 257 --------MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEH 307
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
H+R +++RD+K +N+L+D++G ++I+D GLA FS KK+P S V T Y APE+L
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHAS-VGTHGYMAPEVLQK 364
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y D +S GC+L ++ G H F+ + + ++ L+
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRG-------------HSPFRQHKTKDKHEIDRMTLTMAV 411
Query: 356 RPPQSYKPRL 365
P S+ P L
Sbjct: 412 ELPDSFSPEL 421
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV---KF---DTSEPHSVKFMAREIMILQKLDHPNI 186
+G G V A +R T K VA++ + KF E + EI IL+KL+HP I
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 187 VKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ----QLLSGLQHCHDRG 240
+K++ + Y+V E M+ +++ N K + Q+L +Q+ H+ G
Sbjct: 203 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 259
Query: 241 ILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPELL 293
I+HRD+K N+L+ +++ ++KI DFG + TS + TL Y APE+L
Sbjct: 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------TSLMRTLCGTPTYLAPEVL 313
Query: 294 --LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+G Y +D WS G +L G P
Sbjct: 314 VSVGTAGYNRAVDCWSLGVILFICLSGYP 342
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ ++KI ++G G V+K + +G ++A K + + +P + RE+ +L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 64
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS--------GLQHC 236
IV G S + S+ + E M + G++ P+Q+L GL +
Sbjct: 65 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYL 120
Query: 237 HDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
++ I+HRDVK SN+L++ G +K+ DFG++ + S V T Y +PE L G
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG 177
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR-PIMP 323
T Y V D+WS G L EM +GR PI P
Sbjct: 178 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
K+GQG + V+ T + VA+K +K P + +E +++KL H +V+L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEA---FLQEAQVMKKLRHEKLVQLYA 247
Query: 192 LATSRMQYSLYLVFEFM-QTDLARIISNPEGK-LTEPQ------QLLSGLQHCHDRGILH 243
+ + +Y+V E+M + L + GK L PQ Q+ SG+ + +H
Sbjct: 248 VVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD++ +N+L+ +N V K+ADFGL N+ + + APE L + +
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 363
Query: 304 DLWSAGCLLAEMFL-GRPIMPG---RTEVEQLHRIFKLCGSP 341
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 405
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV---KF---DTSEPHSVKFMAREIMILQKLDHPNI 186
+G G V A +R T K VA++ + KF E + EI IL+KL+HP I
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 187 VKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ----QLLSGLQHCHDRG 240
+K++ + Y+V E M+ +++ N K + Q+L +Q+ H+ G
Sbjct: 217 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 273
Query: 241 ILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW----YRAPELL 293
I+HRD+K N+L+ +++ ++KI DFG + TS + TL Y APE+L
Sbjct: 274 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------TSLMRTLCGTPTYLAPEVL 327
Query: 294 --LGATDYGVGIDLWSAGCLLAEMFLGRP 320
+G Y +D WS G +L G P
Sbjct: 328 VSVGTAGYNRAVDCWSLGVILFICLSGYP 356
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ ++KI ++G G V+K + +G ++A K + + +P + RE+ +L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 64
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS--------GLQHC 236
IV G S + S+ + E M + G++ P+Q+L GL +
Sbjct: 65 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYL 120
Query: 237 HDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
++ I+HRDVK SN+L++ G +K+ DFG++ + S V T Y +PE L G
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG 177
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR-PIMP 323
T Y V D+WS G L EM +GR PI P
Sbjct: 178 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKLD 182
++ Y+ + +G G S V+ A D + VA+K ++ D + +P RE L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 183 HPNIVKL--EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQL------LSGLQ 234
HP IV + G A + Y+V E++ R I + EG +T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVVTLWYRAPEL 292
H GI+HRDVK +N+LI +K+ DFG+A S N + + T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEV 328
G + D++S GC+L E+ G P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ ++KI ++G G V+K + +G ++A K + + +P + RE+ +L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 64
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS--------GLQHC 236
IV G S + S+ + E M + G++ P+Q+L GL +
Sbjct: 65 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYL 120
Query: 237 HDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
++ I+HRDVK SN+L++ G +K+ DFG++ + S V T Y +PE L G
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG 177
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR-PIMP 323
T Y V D+WS G L EM +GR PI P
Sbjct: 178 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ ++KI ++G G V+K + +G ++A K + + +P + RE+ +L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 64
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS--------GLQHC 236
IV G S + S+ + E M + G++ P+Q+L GL +
Sbjct: 65 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYL 120
Query: 237 HDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
++ I+HRDVK SN+L++ G +K+ DFG++ + S V T Y +PE L G
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG 177
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR-PIMP 323
T Y V D+WS G L EM +GR PI P
Sbjct: 178 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 42/250 (16%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALK---KVKFDTSEPHSVKFMAREIMILQKL-DHPNIVK 188
+G+G + VY DTGK+ A+K K + + ++ R ++ L D P IV
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 189 LEGLATSRMQYSLY------LVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQH 235
M Y+ + + + M DL +S G +E +++ GL+H
Sbjct: 257 --------MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEH 307
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
H+R +++RD+K +N+L+D++G ++I+D GLA FS KK+P S V T Y APE+L
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHAS-VGTHGYMAPEVLQK 364
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y D +S GC+L ++ G H F+ + + ++ L+
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRG-------------HSPFRQHKTKDKHEIDRMTLTMAV 411
Query: 356 RPPQSYKPRL 365
P S+ P L
Sbjct: 412 ELPDSFSPEL 421
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 42/250 (16%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALK---KVKFDTSEPHSVKFMAREIMILQKL-DHPNIVK 188
+G+G + VY DTGK+ A+K K + + ++ R ++ L D P IV
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 189 LEGLATSRMQYSLY------LVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQH 235
M Y+ + + + M DL +S G +E +++ GL+H
Sbjct: 257 --------MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEH 307
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
H+R +++RD+K +N+L+D++G ++I+D GLA FS KK+P S V T Y APE+L
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHAS-VGTHGYMAPEVLQK 364
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTF 355
Y D +S GC+L ++ G H F+ + + ++ L+
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRG-------------HSPFRQHKTKDKHEIDRMTLTMAV 411
Query: 356 RPPQSYKPRL 365
P S+ P L
Sbjct: 412 ELPDSFSPEL 421
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKL 181
+ +D + +G+GT+ V ++ TG+ A+K ++ + V E +LQ
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFE-----FMQTDLARIISNPEGKLTEPQQLLSGLQHC 236
HP + L+ + + + + F R+ + + +++S L++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY-GAEIVSALEYL 121
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H R +++RD+K NL++DK+G +KI DFGL + + T Y APE +L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPE-VLED 179
Query: 297 TDYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKL 181
+ +D + +G+GT+ V ++ TG+ A+K ++ + V E +LQ
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFE-----FMQTDLARIISNPEGKLTEPQQLLSGLQHC 236
HP + L+ + + + + F R+ + + +++S L++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY-GAEIVSALEYL 121
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H R +++RD+K NL++DK+G +KI DFGL + + T Y APE +L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPE-VLED 179
Query: 297 TDYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ +++I +G G++ V +TG A+K + K + ++ E ILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQ------QLLSG 232
P + KLE + + +LY+V E+ M + L RI G+ EP Q++
Sbjct: 102 PFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 154
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
++ H +++RD+K NL+ID+ G +K+ DFG F+ K T Y APE+
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 210
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+L + Y +D W+ G L+ EM G P
Sbjct: 211 IL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 25/238 (10%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+AE + ++G+G Y +V K + + +G+I+A+K+++ E + + ++++ D
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD 79
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTE--PQQLLS--------G 232
P IV+ G A R + ++ E M T + L + P+++L
Sbjct: 80 CPYIVQFYG-ALFR-EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKA 137
Query: 233 LQHCHDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVVTLWYRA 289
L H + I+HRD+K SN+L+D++G +K+ DFG++ S K R R Y A
Sbjct: 138 LNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRP----YMA 193
Query: 290 PELLLGATD---YGVGIDLWSAGCLLAEMFLGRPIMPGRTEV-EQLHRIFKLCGSPSE 343
PE + + Y V D+WS G L E+ GR P V +QL ++ K G P +
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPPQ 249
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 126 SYDKIDKVGQGTYSNVYKA---LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S DK+ VG G + V L VA+K +K +E F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQ------LLSGLQH 235
HPNI++LEG+ T + +V E+M+ L + + + T Q + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELL 293
D G +HRD+ N+LI+ N V K++DFGLA + + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 127 YDKIDKVGQGTYSNVY---KALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
++ + +GQG++ V+ K D ++ A+K +K T + E IL +++H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHC 236
P IVKL + + LYL+ +F++ DL +S E TE +L L H
Sbjct: 86 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHL 142
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H GI++RD+K N+L+D+ G +K+ DFGL+ S + ++ S T+ Y APE ++
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPE-VVNR 200
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
+ D WS G L+ EM G G+ E + I K
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 127 YDKIDKVGQGTYSNVY---KALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
++ + +GQG++ V+ K D ++ A+K +K T + E IL +++H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHC 236
P IVKL + + LYL+ +F++ DL +S E TE +L L H
Sbjct: 87 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHL 143
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H GI++RD+K N+L+D+ G +K+ DFGL+ S + ++ S T+ Y APE ++
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPE-VVNR 201
Query: 297 TDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
+ D WS G L+ EM G G+ E + I K
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 241
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKL 181
+ +D + +G+GT+ V ++ TG+ A+K ++ + V E +LQ
Sbjct: 8 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFE-----FMQTDLARIISNPEGKLTEPQQLLSGLQHC 236
HP + L+ + + + + F R+ + + +++S L++
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY-GAEIVSALEYL 126
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H R +++RD+K NL++DK+G +KI DFGL + + T Y APE +L
Sbjct: 127 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPE-VLED 184
Query: 297 TDYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKL 181
+ +D + +G+GT+ V ++ TG+ A+K ++ + V E +LQ
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFE-----FMQTDLARIISNPEGKLTEPQQLLSGLQHC 236
HP + L+ + + + + F R+ + + +++S L++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY-GAEIVSALEYL 121
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H R +++RD+K NL++DK+G +KI DFGL + + T Y APE +L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPE-VLED 179
Query: 297 TDYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 21/231 (9%)
Query: 118 GLVPKSA---------ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHS 167
GLVP+ + + Y+ + +G G S V+ A D + VA+K ++ D + +P
Sbjct: 13 GLVPRGSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSF 72
Query: 168 VKFMAREIMILQKLDHPNIVKL--EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTE 225
RE L+HP IV + G A + Y+V E++ R I + EG +T
Sbjct: 73 YLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 132
Query: 226 PQQL------LSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRP 277
+ + L H GI+HRDVK +N++I +K+ DFG+A S N
Sbjct: 133 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 278 LTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEV 328
+ + T Y +PE G + D++S GC+L E+ G P G + V
Sbjct: 193 TAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ ++KI ++G G V+K + +G ++A K + + +P + RE+ +L + + P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 83
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS--------GLQHC 236
IV G S + S+ + E M + G++ P+Q+L GL +
Sbjct: 84 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYL 139
Query: 237 HDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
++ I+HRDVK SN+L++ G +K+ DFG++ + S V T Y +PE L G
Sbjct: 140 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG 196
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR-PIMPG 324
T Y V D+WS G L EM +GR PI G
Sbjct: 197 -THYSVQSDIWSMGLSLVEMAVGRYPIGSG 225
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 28/239 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
ES + K+G G + V+ ++ K VA+K +K T SV+ E +++ L H
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGT---MSVQAFLEEANLMKTLQHD 67
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQ--TDLARIISNPEGKLTEPQ------QLLSGLQHC 236
+V+L + T + +Y++ EFM + L + S+ GK+ P+ Q+ G+ +
Sbjct: 68 KLVRLYAVVTK--EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 125
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
+ +HRD++ +N+L+ ++ + KIADFGLA N+ + + APE A
Sbjct: 126 ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE----A 181
Query: 297 TDYG---VGIDLWSAGCLLAEMF-LGRPIMPGRTEVE------QLHRIFKLCGSPSEDY 345
++G + ++WS G LL E+ G+ PGRT + Q +R+ ++ P E Y
Sbjct: 182 INFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELY 240
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 32/256 (12%)
Query: 120 VPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQ 179
VP+ E+ ++++G G V+ K VA+K +K + P + F+A E +++
Sbjct: 10 VPR--ETLKLVERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 63
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEG-KLT------EPQQLLS 231
+L H +V+L + T Q +Y++ E+M+ L + P G KLT Q+
Sbjct: 64 QLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
G+ +R +HRD++ +N+L+ KIADFGLA + + + APE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE 180
Query: 292 LLLGATDYG---VGIDLWSAGCLLAEMFL-GRPIMPGRTE---VEQLHRIFKLC---GSP 341
A +YG + D+WS G LL E+ GR PG T ++ L R +++ P
Sbjct: 181 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 236
Query: 342 SEDYWKKLRLSTTFRP 357
E Y + +RL RP
Sbjct: 237 EELY-QLMRLCWKERP 251
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 130 IDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
I ++G+G + +V Y L +TG +VA+K+++ S P + REI IL+ L
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDF 69
Query: 186 IVKLEGLATSRMQYSLYLVFE---------FMQTDLARIISNPEGKLTEPQQLLSGLQHC 236
IVK G++ + L LV E F+Q AR+ + L Q+ G+++
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL 127
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLT---SRVVTLWYRAPELL 293
R +HRD+ N+L++ +KIADFGLA +K + + WY APE
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APE-S 185
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
L + D+WS G +L E+F
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELF 208
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLE 190
D +GQG +NV++ + TG + A+K V + S V RE +L+KL+H NIVKL
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIK-VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 191 GLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQ--------LLSGLQHCHDRGI 241
+ L+ EF L ++ P P+ ++ G+ H + GI
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 242 LHRDVKGSNLL--IDKNG--VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+HR++K N++ I ++G V K+ DFG A +++ S T Y P++ A
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLHPDMYERAV 191
Query: 298 -------DYGVGIDLWSAGCLLAEMFLG----RPIMPGRTEVEQLHRIFKLCGSPS 342
YG +DLWS G G RP R E +++I + G PS
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 27/223 (12%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
++ +++G G + V + + +DTG+ VA+K+ + + S P + + EI I++KL+HPN+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS-PKNRERWCLEIQIMKKLNHPNV 75
Query: 187 VK-------LEGLATSRMQYSLYLVFEFMQT-DLARIISN-------PEGKL-TEPQQLL 230
V L+ LA + + L E+ + DL + ++ EG + T +
Sbjct: 76 VSAREVPDGLQKLAPNDLPL---LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 231 SGLQHCHDRGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWY 287
S L++ H+ I+HRD+K N+++ + + KI D G A ++ T V TL Y
Sbjct: 133 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQY 190
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMFLG-RPIMPGRTEVE 329
APE LL Y V +D WS G L E G RP +P V+
Sbjct: 191 LAPE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 232
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 17/215 (7%)
Query: 111 IPREVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFD-------TS 163
+ E LA + ++ Y + +G G + V+ A+D++ K V +K +K +
Sbjct: 10 VELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIE 69
Query: 164 EPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKL 223
+P K + EI IL +++H NI+K+ + ++ + L + DL I +L
Sbjct: 70 DPKLGK-VTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR-HPRL 127
Query: 224 TEP------QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRP 277
EP +QL+S + + + I+HRD+K N++I ++ +K+ DFG A Y + +
Sbjct: 128 DEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKL 185
Query: 278 LTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLL 312
+ T+ Y APE+L+G G +++WS G L
Sbjct: 186 FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 126 SYDKIDKVGQGTYSNVYKA---LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S DK+ VG G + V L VA+K +K +E F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQ------LLSGLQH 235
HPNI++LEG+ T + +V E+M+ L + + + T Q + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELL 293
D G +HRD+ N+LI+ N V K++DFGL+ + + T+R + + + +PE
Sbjct: 163 LSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 27/223 (12%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
++ +++G G + V + + +DTG+ VA+K+ + + S P + + EI I++KL+HPN+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS-PKNRERWCLEIQIMKKLNHPNV 74
Query: 187 VK-------LEGLATSRMQYSLYLVFEFMQT-DLARIISN-------PEGKL-TEPQQLL 230
V L+ LA + + L E+ + DL + ++ EG + T +
Sbjct: 75 VSAREVPDGLQKLAPNDLPL---LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 231 SGLQHCHDRGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWY 287
S L++ H+ I+HRD+K N+++ + + KI D G A ++ T V TL Y
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQY 189
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMFLG-RPIMPGRTEVE 329
APE LL Y V +D WS G L E G RP +P V+
Sbjct: 190 LAPE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 231
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 26/242 (10%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV------KFDTSEPHSVK-FMAREIMI 177
E+Y+ + +G+G S V + + + T K A+K + F E ++ +E+ I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 178 LQKLD-HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQ------LL 230
L+K+ HPNI++L+ T +LVF+ M+ + L+E + LL
Sbjct: 77 LRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 231 SGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I+HRD+K N+L+D + +K+ DFG + P +K L S T Y AP
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAP 192
Query: 291 ELLLGATD-----YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK---LCGSPS 342
E++ + + YG +D+WS G ++ + G P R ++ L I GSP
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 343 ED 344
D
Sbjct: 253 WD 254
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 133 VGQGTYSNVYKALDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G G + V + GK VA+K +K +E F+ E I+ + DHPNI+ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPNIIHL 88
Query: 190 EGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQ------LLSGLQHCHDRGIL 242
EG+ T + +V E+M+ L + +G+ T Q + +G+++ D G +
Sbjct: 89 EGVVTK--SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELLLGATDYG 300
HRD+ N+LI+ N V K++DFGL+ + + T+R + + + APE + +
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIAFRKFT 205
Query: 301 VGIDLWSAGCLLAEM 315
D+WS G ++ E+
Sbjct: 206 SASDVWSYGIVMWEV 220
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLE 190
+++G+G + V+ R +VA+K + KF+ +E IL++ HPNIV+L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL-QEARILKQYSHPNIVRLI 178
Query: 191 GLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLL-------SGLQHCHDRGILH 243
G+ T + +Y+V E +Q EG + LL +G+++ + +H
Sbjct: 179 GVCTQKQ--PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS-RVVTLWYRAPELLLGATDYGVG 302
RD+ N L+ + VLKI+DFG++ + R V + + APE L Y
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE-ALNYGRYSSE 295
Query: 303 IDLWSAGCLLAEMF 316
D+WS G LL E F
Sbjct: 296 SDVWSFGILLWETF 309
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKLD 182
++ Y+ + +G G S V+ A D + VA+K ++ D + +P RE L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 183 HPNIVKL--EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQL------LSGLQ 234
HP IV + G A + Y+V E++ R I + EG +T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVVTLWYRAPEL 292
H GI+HRDVK +N++I +K+ DFG+A S N + + T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEV 328
G + D++S GC+L E+ G P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 112 PREVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFM 171
P E A +P+ + +K K+G G + V+ A K VA+K +K + SV+
Sbjct: 177 PWEKDAWEIPRESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGS---MSVEAF 230
Query: 172 AREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFM-QTDLARIISNPEG------KLT 224
E +++ L H +VKL + T +Y++ EFM + L + + EG KL
Sbjct: 231 LAEANVMKTLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 287
Query: 225 E-PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV 283
+ Q+ G+ R +HRD++ +N+L+ + V KIADFGLA N+
Sbjct: 288 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 347
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRI 334
+ + APE + + + D+WS G LL E+ GR PG + E + +
Sbjct: 348 PIKWTAPE-AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKLD 182
++ Y+ + +G G S V+ A D + VA+K ++ D + +P RE L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 183 HPNIVKL--EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQL------LSGLQ 234
HP IV + G A + Y+V E++ R I + EG +T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVVTLWYRAPEL 292
H GI+HRDVK +N++I +K+ DFG+A S N + + T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEV 328
G + D++S GC+L E+ G P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKLD 182
++ Y+ + +G G S V+ A D + VA+K ++ D + +P RE L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 183 HPNIVKL--EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQL------LSGLQ 234
HP IV + G A + Y+V E++ R I + EG +T + + L
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVVTLWYRAPEL 292
H GI+HRDVK +N++I +K+ DFG+A S N + + T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEV 328
G + D++S GC+L E+ G P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLE 190
+++G+G + V+ R +VA+K + KF+ +E IL++ HPNIV+L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL-QEARILKQYSHPNIVRLI 178
Query: 191 GLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLL-------SGLQHCHDRGILH 243
G+ T + +Y+V E +Q EG + LL +G+++ + +H
Sbjct: 179 GVCTQKQ--PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS-RVVTLWYRAPELLLGATDYGVG 302
RD+ N L+ + VLKI+DFG++ + R V + + APE L Y
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPE-ALNYGRYSSE 295
Query: 303 IDLWSAGCLLAEMF 316
D+WS G LL E F
Sbjct: 296 SDVWSFGILLWETF 309
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDT--SEPHSVKFMAREIMILQKLDHP 184
Y+ + +G G ++ V A TG++VA+K + +T S+ +K EI L+ L H
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIK---TEIEALKNLRHQ 68
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ------QLLSGLQHC 236
+I +L + + + +++V E+ IIS + +L+E + Q++S + +
Sbjct: 69 HICQLYHVLETANK--IFMVLEYCPGGELFDYIIS--QDRLSEEETRVVFRQIVSAVAYV 124
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +G HRD+K NLL D+ LK+ DFGL NK L + +L Y APEL+ G
Sbjct: 125 HSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 297 TDYGVGIDLWSAGCLLAEMFLG 318
+ G D+WS G LL + G
Sbjct: 185 SYLGSEADVWSMGILLYVLMCG 206
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 126 SYDKIDKVGQGTYSNVYKA---LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S DK+ VG G + V L VA+K +K +E F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQ------LLSGLQH 235
HPNI++LEG+ T + +V E+M+ L + + + T Q + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELL 293
D G +HRD+ N+LI+ N V K++DFGL+ + + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 153 VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-D 211
VA+K +K +E F+ E I+ + DHPNI++LEG+ T + +V E+M+
Sbjct: 74 VAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGS 130
Query: 212 LARIISNPEGKLTEPQQ------LLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFG 265
L + + + T Q + SG+++ D G +HRD+ N+LI+ N V K++DFG
Sbjct: 131 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 190
Query: 266 LANYFSPNKKRPLTSR--VVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
L+ + + T+R + + + +PE + + D+WS G +L E+
Sbjct: 191 LSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVM 242
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 126 SYDKIDKVGQGTYSNVYKA---LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S DK+ VG G + V L VA+K +K +E F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQ------LLSGLQH 235
HPNI++LEG+ T + +V E+M+ L + + + T Q + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELL 293
D G +HRD+ N+LI+ N V K++DFGL+ + + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 126 SYDKIDKVGQGTYSNVYKA---LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S DK+ VG G + V L VA+K +K +E F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQ------LLSGLQH 235
HPNI++LEG+ T + +V E+M+ L + + + T Q + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELL 293
D G +HRD+ N+LI+ N V K++DFGL+ + + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 112 PREVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFM 171
P E A +P+ + +K K+G G + V+ A K VA+K +K + SV+
Sbjct: 4 PWEKDAWEIPRESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGS---MSVEAF 57
Query: 172 AREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFM-QTDLARIISNPEG------KLT 224
E +++ L H +VKL + T +Y++ EFM + L + + EG KL
Sbjct: 58 LAEANVMKTLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 114
Query: 225 E-PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV 283
+ Q+ G+ R +HRD++ +N+L+ + V KIADFGLA N+
Sbjct: 115 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 174
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRI 334
+ + APE + + + D+WS G LL E+ GR PG + E + +
Sbjct: 175 PIKWTAPE-AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 225
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 153 VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-D 211
VA+K +K +E F+ E I+ + DHPNI++LEG+ T + +V E+M+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGS 132
Query: 212 LARIISNPEGKLTEPQQ------LLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFG 265
L + + + T Q + SG+++ D G +HRD+ N+LI+ N V K++DFG
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 266 LANYFSPNKKRPLTSR--VVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
L+ + + T+R + + + +PE + + D+WS G +L E+
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
++ Y+ + +G G + D+ + ++VA+K ++ +VK REI+ + L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHC 236
PNIV+ + + + L +V E+ +L I N G+ +E QQL+SG+ +C
Sbjct: 75 PNIVRFKEVILTPTH--LAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYC 131
Query: 237 HDRGILHRDVKGSNLLIDKNGV--LKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL 294
H + HRD+K N L+D + LKI FG + S +P S V T Y APE+LL
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQP-KSTVGTPAYIAPEVLL 189
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
G D+WS G L M +G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 153 VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-D 211
VA+K +K +E F+ E I+ + DHPNI++LEG+ T + +V E+M+
Sbjct: 47 VAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGS 103
Query: 212 LARIISNPEGKLTEPQQ------LLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFG 265
L + + + T Q + SG+++ D G +HRD+ N+LI+ N V K++DFG
Sbjct: 104 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 163
Query: 266 LANYFSPNKKRPLTSR--VVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
L+ + + T+R + + + +PE + + D+WS G +L E+
Sbjct: 164 LSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 28/239 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
ES + ++G G + V+ ++ K VA+K +K T SV+ E +++ L H
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGT---MSVQAFLEEANLMKTLQHD 68
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQ--TDLARIISNPEGKLTEPQ------QLLSGLQHC 236
+V+L + T + +Y++ E+M + L + S+ GK+ P+ Q+ G+ +
Sbjct: 69 KLVRLYAVVTR--EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 126
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
+ +HRD++ +N+L+ ++ + KIADFGLA N+ + + APE A
Sbjct: 127 ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE----A 182
Query: 297 TDYG---VGIDLWSAGCLLAEMF-LGRPIMPGRTEVE------QLHRIFKLCGSPSEDY 345
++G + D+WS G LL E+ G+ PGRT + Q +R+ ++ P E Y
Sbjct: 183 INFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELY 241
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKLD 182
++ Y+ + +G G S V+ A D + VA+K ++ D + +P RE L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 183 HPNIVKL--EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQL------LSGLQ 234
HP IV + G A + Y+V E++ R I + EG +T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVVTLWYRAPEL 292
H GI+HRDVK +N++I +K+ DFG+A S N + + T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRPIMPG 324
G + D++S GC+L E+ G P G
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 126 SYDKIDKVGQGTYSNVYKA---LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S DK+ VG G + V L VA+K +K +E F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQH 235
HPNI++LEG+ T + +V E+M+ L + + + T Q + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELL 293
D G +HRD+ N+LI+ N V K++DFGL + + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 153 VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-D 211
VA+K +K +E F+ E I+ + DHPNI++LEG+ T + +V E+M+
Sbjct: 64 VAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGS 120
Query: 212 LARIISNPEGKLTEPQQ------LLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFG 265
L + + + T Q + SG+++ D G +HRD+ N+LI+ N V K++DFG
Sbjct: 121 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 180
Query: 266 LANYFSPNKKRPLTSR--VVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
L+ + + T+R + + + +PE + + D+WS G +L E+
Sbjct: 181 LSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVM 232
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 23/228 (10%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN- 185
Y + ++G G S V++ L+ + +I A+K V + ++ ++ EI L KL +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 186 -IVKLEGLATSRMQYSLYLVFEFMQTDLARIIS-----NPEGKLTEPQQLLSGLQHCHDR 239
I++L + QY +Y+V E DL + +P + + + +L + H
Sbjct: 117 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL-TSRVVTLWYRAPELLLGATD 298
GI+H D+K +N LI +G+LK+ DFG+AN P+ + S+V T+ Y PE + +
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 299 ----------YGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIF 335
D+WS GC+L M G+ P ++ +LH I
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 129 KIDKV-GQGTYSNVYKALDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
KI++V G G + V + GK VA+K +K +E F+ E I+ + DHP
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLC-EASIMGQFDHP 104
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTD-LARIISNPEGKLTEPQ------QLLSGLQHCH 237
N+V LEG+ T + +V EFM+ L + +G+ T Q + +G+++
Sbjct: 105 NVVHLEGVVTR--GKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVVTLWYRAPELLLG 295
D G +HRD+ N+L++ N V K++DFGL+ P T + + + APE +
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE-AIQ 221
Query: 296 ATDYGVGIDLWSAGCLLAEMF 316
+ D+WS G ++ E+
Sbjct: 222 YRKFTSASDVWSYGIVMWEVM 242
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
++ Y+ + +G G + D+ ++VA+K ++ +VK REI+ + L H
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHC 236
PNIV+ + + + L +V E+ +L I N G+ +E QQL+SG+ +
Sbjct: 75 PNIVRFKEVILTPTH--LAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYA 131
Query: 237 HDRGILHRDVKGSNLLIDKNGV--LKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL 294
H + HRD+K N L+D + LKIADFG + S +P S V T Y APE+LL
Sbjct: 132 HAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA-SVLHSQP-KSAVGTPAYIAPEVLL 189
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
G D+WS G L M +G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 129 KIDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
KI +G+G + V Y + TG++VA+K +K D H + +EI IL+ L H
Sbjct: 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGW-KQEIDILRTLYHE 93
Query: 185 NIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQQLLSGLQHCHDR 239
+I+K +G SL LV E+ ++ L R L QQ+ G+ + H +
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR----VVTLWYRAPELLLG 295
+HRD+ N+L+D + ++KI DFGLA P R WY APE L
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEXYRVREDGDSPVFWY-APECLKE 211
Query: 296 ATDYGVGIDLWSAGCLLAEMF 316
Y D+WS G L E+
Sbjct: 212 YKFY-YASDVWSFGVTLYELL 231
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ ++KI ++G G V+K + +G ++A K + + +P + RE+ +L + + P
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 67
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS--------GLQHC 236
IV G S + S+ + E M + G++ P+Q+L GL +
Sbjct: 68 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYL 123
Query: 237 HDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
++ I+HRDVK SN+L++ G +K+ DFG++ V T Y +PE L G
Sbjct: 124 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF---VGTRSYMSPERLQG 180
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR 319
T Y V D+WS G L EM +GR
Sbjct: 181 -THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 129 KIDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
KI +G+G + V Y + TG++VA+K +K D H + +EI IL+ L H
Sbjct: 18 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGW-KQEIDILRTLYHE 76
Query: 185 NIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQQLLSGLQHCHDR 239
+I+K +G + + SL LV E+ ++ L R L QQ+ G+ + H +
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR----VVTLWYRAPELLLG 295
+HR++ N+L+D + ++KI DFGLA P R WY APE L
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKE 194
Query: 296 ATDYGVGIDLWSAGCLLAEMF 316
Y D+WS G L E+
Sbjct: 195 YKFYYAS-DVWSFGVTLYELL 214
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 23/228 (10%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN- 185
Y + ++G G S V++ L+ + +I A+K V + ++ ++ EI L KL +
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 186 -IVKLEGLATSRMQYSLYLVFEFMQTDLARIIS-----NPEGKLTEPQQLLSGLQHCHDR 239
I++L + QY +Y+V E DL + +P + + + +L + H
Sbjct: 70 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL-TSRVVTLWYRAPELLLGATD 298
GI+H D+K +N LI +G+LK+ DFG+AN P+ + S+V T+ Y PE + +
Sbjct: 128 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 299 ----------YGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIF 335
D+WS GC+L M G+ P ++ +LH I
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 234
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 23/228 (10%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN- 185
Y + ++G G S V++ L+ + +I A+K V + ++ ++ EI L KL +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 186 -IVKLEGLATSRMQYSLYLVFEFMQTDLARIIS-----NPEGKLTEPQQLLSGLQHCHDR 239
I++L + QY +Y+V E DL + +P + + + +L + H
Sbjct: 117 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL-TSRVVTLWYRAPELLLGATD 298
GI+H D+K +N LI +G+LK+ DFG+AN P+ + S+V T+ Y PE + +
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 299 ----------YGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIF 335
D+WS GC+L M G+ P ++ +LH I
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 29/236 (12%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLE 190
D +GQG +NV++ + TG + A+K V + S V RE +L+KL+H NIVKL
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIK-VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 191 GLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ--------QLLSGLQHCHDRGI 241
+ L+ EF L ++ P P+ ++ G+ H + GI
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 242 LHRDVKGSNLL--IDKNG--VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+HR++K N++ I ++G V K+ DFG A +++ T Y P++ A
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVXLYGTEEYLHPDMYERAV 191
Query: 298 -------DYGVGIDLWSAGCLLAEMFLG----RPIMPGRTEVEQLHRIFKLCGSPS 342
YG +DLWS G G RP R E +++I + G PS
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 26/242 (10%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV------KFDTSEPHSVK-FMAREIMI 177
E+Y+ + +G+G S V + + + T K A+K + F E ++ +E+ I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 178 LQKLD-HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQ------LL 230
L+K+ HPNI++L+ T +LVF+ M+ + L+E + LL
Sbjct: 77 LRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 231 SGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I+HRD+K N+L+D + +K+ DFG + P +K L T Y AP
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAP 192
Query: 291 ELLLGATD-----YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK---LCGSPS 342
E++ + + YG +D+WS G ++ + G P R ++ L I GSP
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 343 ED 344
D
Sbjct: 253 WD 254
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 17/223 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ YD +++G G + V++ +R TG A K V T + + +EI + L HP
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM--TPHESDKETVRKEIQTMSVLRHP 108
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCH 237
+V L + + +++EFM +L +++ K++E + Q+ GL H H
Sbjct: 109 TLVNLHDAFEDDNE--MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 238 DRGILHRDVKGSNLLID--KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +H D+K N++ ++ LK+ DFGL + P + +T+ T + APE+ G
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG--TAEFAAPEVAEG 224
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLC 338
G D+WS G L + G G + E L R K C
Sbjct: 225 KP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETL-RNVKSC 265
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 19/220 (8%)
Query: 112 PREVLAGLVPKSAESYDKIDKV-GQGTYSNVYKALDRDTGK---IVALKKVKFDTSEPHS 167
P E + + S KI++V G G + V + GK VA+K +K +E
Sbjct: 19 PNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR 78
Query: 168 VKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP 226
F++ E I+ + DHPN++ LEG+ T + ++ EFM+ L + +G+ T
Sbjct: 79 RDFLS-EASIMGQFDHPNVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQNDGQFTVI 135
Query: 227 QQ------LLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS 280
Q + +G+++ D +HRD+ N+L++ N V K++DFGL+ + + P +
Sbjct: 136 QLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 195
Query: 281 RV----VTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
+ + + APE + + D+WS G ++ E+
Sbjct: 196 SALGGKIPIRWTAPE-AIQYRKFTSASDVWSYGIVMWEVM 234
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 37/235 (15%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
++ I +G+G + V++A ++ A+K+++ E K M RE+ L KL+HP I
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM-REVKALAKLEHPGI 65
Query: 187 VK-----LEGLATSRMQYSLYLVFEFMQTDLAR---IISNPEGKLTEPQ----------- 227
V+ LE T ++Q S V+ ++Q L R + G+ T +
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR-----PL---- 278
Q+ ++ H +G++HRD+K SN+ + V+K+ DFGL +++ P+
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 279 --TSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQL 331
T +V T Y +PE + G + Y +D++S G +L E+ + P T++E++
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFEL-----LYPFSTQMERV 234
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 129 KIDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
KI +G+G + V Y + TG++VA+K +K D H + +EI IL+ L H
Sbjct: 18 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGW-KQEIDILRTLYHE 76
Query: 185 NIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQQLLSGLQHCHDR 239
+I+K +G + + SL LV E+ ++ L R L QQ+ G+ + H +
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR----VVTLWYRAPELLLG 295
+HR++ N+L+D + ++KI DFGLA P R WY APE L
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKE 194
Query: 296 ATDYGVGIDLWSAGCLLAEMF 316
Y D+WS G L E+
Sbjct: 195 YKFYYAS-DVWSFGVTLYELL 214
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 125 ESYDKIDKVGQGTYSNVY---KALDRDTGKIVALKKVKFDT--SEPHSVKFMAREIMILQ 179
E+++ + +G G Y V+ K DTGK+ A+K +K T + + + E +L+
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 180 KL-DHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLS 231
+ P +V L + + L+L+ +++ +L +S E + TE + +++
Sbjct: 114 HIRQSPFLVTLH--YAFQTETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVL 170
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
L+H H GI++RD+K N+L+D NG + + DFGL+ F ++ T+ Y AP+
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 292 LLLGA-TDYGVGIDLWSAGCLLAEMFLG 318
++ G + + +D WS G L+ E+ G
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 26/242 (10%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV------KFDTSEPHSVK-FMAREIMI 177
E+Y+ + +G+G S V + + + T K A+K + F E ++ +E+ I
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 178 LQKLD-HPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQ------LL 230
L+K+ HPNI++L+ T +LVF+ M+ + L+E + LL
Sbjct: 64 LRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 121
Query: 231 SGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I+HRD+K N+L+D + +K+ DFG + P +K L T Y AP
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAP 179
Query: 291 ELLLGATD-----YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK---LCGSPS 342
E++ + + YG +D+WS G ++ + G P R ++ L I GSP
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 239
Query: 343 ED 344
D
Sbjct: 240 WD 241
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 126 SYDKIDKVGQGTYSNVYKA---LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S DK+ VG G + V L VA+K +K +E F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQ------LLSGLQH 235
HPNI++LEG+ T + +V E M+ L + + + T Q + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELL 293
D G +HRD+ N+LI+ N V K++DFGL+ + + T+R + + + +PE
Sbjct: 163 LSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 126 SYDKIDKVGQGTYSNVYKA---LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S DK+ VG G + V L VA+K +K +E F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQH 235
HPNI++LEG+ T + +V E M+ L + + + T Q + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELL 293
D G +HRD+ N+LI+ N V K++DFGL+ + + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 107/208 (51%), Gaps = 28/208 (13%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKK-VKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G + K R+TG+++ +K+ ++FD + + +E+ +++ L+HPN++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEE---TQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 192 LATSRMQYSLYLVFEFMQTDLAR-IISNPEG------KLTEPQQLLSGLQHCHDRGILHR 244
+ + L + E+++ R II + + +++ + + SG+ + H I+HR
Sbjct: 75 VLYKDKR--LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR-------------VVTLWYRAPE 291
D+ N L+ +N + +ADFGLA K +P R V ++ APE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGR 319
++ G + Y +D++S G +L E+ +GR
Sbjct: 193 MINGRS-YDEKVDVFSFGIVLCEI-IGR 218
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 17/223 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ YD +++G G + V++ +R TG A K V T + + +EI + L HP
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM--TPHESDKETVRKEIQTMSVLRHP 214
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCH 237
+V L + + +++EFM +L +++ K++E + Q+ GL H H
Sbjct: 215 TLVNLHDAFEDDNE--MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 238 DRGILHRDVKGSNLLID--KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +H D+K N++ ++ LK+ DFGL + P + +T+ T + APE+ G
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG--TAEFAAPEVAEG 330
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLC 338
G D+WS G L + G G + E L + K C
Sbjct: 331 KP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV-KSC 371
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 23/228 (10%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN- 185
Y + ++G G S V++ L+ + +I A+K V + ++ ++ EI L KL +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 186 -IVKLEGLATSRMQYSLYLVFEFMQTDLARIIS-----NPEGKLTEPQQLLSGLQHCHDR 239
I++L + QY +Y+V E DL + +P + + + +L + H
Sbjct: 89 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL-TSRVVTLWYRAPELLLGATD 298
GI+H D+K +N LI +G+LK+ DFG+AN P+ + S+V T+ Y PE + +
Sbjct: 147 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 299 ----------YGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIF 335
D+WS GC+L M G+ P ++ +LH I
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 253
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 23/228 (10%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN- 185
Y + ++G G S V++ L+ + +I A+K V + ++ ++ EI L KL +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 186 -IVKLEGLATSRMQYSLYLVFEFMQTDLARIIS-----NPEGKLTEPQQLLSGLQHCHDR 239
I++L + QY +Y+V E DL + +P + + + +L + H
Sbjct: 89 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL-TSRVVTLWYRAPELLLGATD 298
GI+H D+K +N LI +G+LK+ DFG+AN P+ + S+V T+ Y PE + +
Sbjct: 147 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 299 ----------YGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIF 335
D+WS GC+L M G+ P ++ +LH I
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 253
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
++ Y+ + +G G + D+ + ++VA+K ++ +VK REI+ + L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEP------QQLLSGLQHC 236
PNIV+ + + + L +V E+ +L I N G+ +E QQL+SG+ +C
Sbjct: 75 PNIVRFKEVILTPTH--LAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYC 131
Query: 237 HDRGILHRDVKGSNLLIDKNGV--LKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL 294
H + HRD+K N L+D + LKI FG + S +P V T Y APE+LL
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQP-KDTVGTPAYIAPEVLL 189
Query: 295 GATDYGVGIDLWSAGCLLAEMFLG 318
G D+WS G L M +G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+VG+G++ V++ D+ TG A+KKV+ + F E++ L P IV L G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------FRVEELVACAGLSSPRIVPLYG 117
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISN----PEGK-LTEPQQLLSGLQHCHDRGILHRD 245
++++ E ++ L ++I PE + L Q L GL++ H R ILH D
Sbjct: 118 AVREGPWVNIFM--ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 175
Query: 246 VKGSNLLIDKNGV-LKIADFGLANYFSPN--KKRPLTSRVV--TLWYRAPELLLGATDYG 300
VK N+L+ +G + DFG A P+ K LT + T + APE+++G
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 234
Query: 301 VGIDLWSAGCLLAEMFLG 318
+D+WS+ C++ M G
Sbjct: 235 AKVDIWSSCCMMLHMLNG 252
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 14/203 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDT---SEPHSVKFMAREIMILQKL 181
++++ I +G+G++ V A ++TG + A+K +K D + + I+ L +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR- 81
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQH 235
+HP + +L + L+ V EF+ + E + +++S L
Sbjct: 82 NHPFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
HD+GI++RD+K N+L+D G K+ADFG+ N T T Y APE+L
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF-CGTPDYIAPEILQE 198
Query: 296 ATDYGVGIDLWSAGCLLAEMFLG 318
YG +D W+ G LL EM G
Sbjct: 199 ML-YGPAVDWWAMGVLLYEMLCG 220
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
+VG+G++ V++ D+ TG A+KKV+ + F E++ L P IV L G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------FRVEELVACAGLSSPRIVPLYG 133
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISN----PEGK-LTEPQQLLSGLQHCHDRGILHRD 245
++++ E ++ L ++I PE + L Q L GL++ H R ILH D
Sbjct: 134 AVREGPWVNIFM--ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 191
Query: 246 VKGSNLLIDKNGV-LKIADFGLANYFSPN--KKRPLTSRVV--TLWYRAPELLLGATDYG 300
VK N+L+ +G + DFG A P+ K LT + T + APE+++G
Sbjct: 192 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 250
Query: 301 VGIDLWSAGCLLAEMFLG 318
+D+WS+ C++ M G
Sbjct: 251 AKVDIWSSCCMMLHMLNG 268
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 23/228 (10%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN- 185
Y + ++G G S V++ L+ + +I A+K V + ++ ++ EI L KL +
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 186 -IVKLEGLATSRMQYSLYLVFEFMQTDLARIIS-----NPEGKLTEPQQLLSGLQHCHDR 239
I++L + QY +Y+V E DL + +P + + + +L + H
Sbjct: 73 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL-TSRVVTLWYRAPELLLGATD 298
GI+H D+K +N LI +G+LK+ DFG+AN P+ + S+V T+ Y PE + +
Sbjct: 131 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 299 ----------YGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIF 335
D+WS GC+L M G+ P ++ +LH I
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 237
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 153 VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-D 211
VA+K +K +E F+ E I+ + DHPNI++LEG+ T + +V E M+
Sbjct: 47 VAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEXMENGS 103
Query: 212 LARIISNPEGKLTEPQQ------LLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFG 265
L + + + T Q + SG+++ D G +HRD+ N+LI+ N V K++DFG
Sbjct: 104 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 163
Query: 266 LANYFSPNKKRPLTSR--VVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
L+ + + T+R + + + +PE + + D+WS G +L E+
Sbjct: 164 LSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 126 SYDKIDKV-GQGTYSNVYKALDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKL 181
S KI+KV G G + V + GK VA+K +K ++ F++ E I+ +
Sbjct: 29 SCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQF 87
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQ 234
DHPNI+ LEG+ T + ++ E+M+ L + +G+ T Q + SG++
Sbjct: 88 DHPNIIHLEGVVTK--CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 145
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPEL 292
+ D +HRD+ N+L++ N V K++DFG++ + + T+R + + + APE
Sbjct: 146 YLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE- 204
Query: 293 LLGATDYGVGIDLWSAGCLLAEMF 316
+ + D+WS G ++ E+
Sbjct: 205 AIAYRKFTSASDVWSYGIVMWEVM 228
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 129 KIDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
KI +G+G + V Y + TG++VA+K +K + P REI IL+ L H
Sbjct: 12 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLYHE 70
Query: 185 NIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQQLLSGLQHCHDR 239
+IVK +G + + S+ LV E+ ++ L R L QQ+ G+ + H +
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR----VVTLWYRAPELLLG 295
+HR + N+L+D + ++KI DFGLA P R WY APE L
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKE 188
Query: 296 ATDYGVGIDLWSAGCLLAEMF 316
Y D+WS G L E+
Sbjct: 189 CKFY-YASDVWSFGVTLYELL 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 126 SYDKIDKV-GQGTYSNVYKALDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKL 181
S KI+KV G G + V + GK VA+K +K ++ F++ E I+ +
Sbjct: 14 SCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQF 72
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQ 234
DHPNI+ LEG+ T + ++ E+M+ L + +G+ T Q + SG++
Sbjct: 73 DHPNIIHLEGVVTK--CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 130
Query: 235 HCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPEL 292
+ D +HRD+ N+L++ N V K++DFG++ + + T+R + + + APE
Sbjct: 131 YLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE- 189
Query: 293 LLGATDYGVGIDLWSAGCLLAEMF 316
+ + D+WS G ++ E+
Sbjct: 190 AIAYRKFTSASDVWSYGIVMWEVM 213
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 129 KIDKVGQGTYSNV----YKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
KI +G+G + V Y + TG++VA+K +K + P REI IL+ L H
Sbjct: 13 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLYHE 71
Query: 185 NIVKLEGLATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQQLLSGLQHCHDR 239
+IVK +G + + S+ LV E+ ++ L R L QQ+ G+ + H +
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR----VVTLWYRAPELLLG 295
+HR + N+L+D + ++KI DFGLA P R WY APE L
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKE 189
Query: 296 ATDYGVGIDLWSAGCLLAEMF 316
Y D+WS G L E+
Sbjct: 190 CKFY-YASDVWSFGVTLYELL 209
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 23/228 (10%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN- 185
Y + ++G G S V++ L+ + +I A+K V + ++ ++ EI L KL +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 186 -IVKLEGLATSRMQYSLYLVFEFMQTDLARIIS-----NPEGKLTEPQQLLSGLQHCHDR 239
I++L + QY +Y+V E DL + +P + + + +L + H
Sbjct: 117 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL-TSRVVTLWYRAPELLLGATD 298
GI+H D+K +N LI +G+LK+ DFG+AN P+ + S+V + Y PE + +
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 299 ----------YGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIF 335
D+WS GC+L M G+ P ++ +LH I
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 23/228 (10%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN- 185
Y + ++G G S V++ L+ + +I A+K V + ++ ++ EI L KL +
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 186 -IVKLEGLATSRMQYSLYLVFEFMQTDLARIIS-----NPEGKLTEPQQLLSGLQHCHDR 239
I++L + QY +Y+V E DL + +P + + + +L + H
Sbjct: 69 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL-TSRVVTLWYRAPELLLGATD 298
GI+H D+K +N LI +G+LK+ DFG+AN P+ + S+V T+ Y PE + +
Sbjct: 127 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 299 ----------YGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIF 335
D+WS GC+L M G+ P ++ +LH I
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 233
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 129 KIDKV-GQGTYSNVYKALDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
KI+KV G G + V + GK VA+K +K ++ F++ E I+ + DHP
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQFDHP 69
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCH 237
NI+ LEG+ T + ++ E+M+ L + +G+ T Q + SG+++
Sbjct: 70 NIIHLEGVVTK--CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELLLG 295
D +HRD+ N+L++ N V K++DFG++ + + T+R + + + APE +
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIA 186
Query: 296 ATDYGVGIDLWSAGCLLAEMF 316
+ D+WS G ++ E+
Sbjct: 187 YRKFTSASDVWSYGIVMWEVM 207
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD-HPNIVKLEG 191
+ +G ++ VY+A D +G+ ALK++ + E + + + +E+ ++KL HPNIV+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN--RAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 192 LAT------SRMQYSLYLVFEFMQTDLARIISNPEGK--------LTEPQQLLSGLQHCH 237
A+ Q L+ E + L + E + L Q +QH H
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 238 DRG--ILHRDVKGSNLLIDKNGVLKIADFGLA-------NYFSPNKKRPLT----SRVVT 284
+ I+HRD+K NLL+ G +K+ DFG A +Y ++R L +R T
Sbjct: 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 285 LWYRAPELLLGATDYGVG--IDLWSAGCLL 312
YR PE++ +++ +G D+W+ GC+L
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVK--FDTSEPHSVKFMAREIMILQKLDHPNIVK 188
+K+G+G + VYK +T VA+KK+ D + + +EI ++ K H N+V+
Sbjct: 37 NKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 189 LEGLATSRMQYSLYLVFEFM-QTDLARIISNPEG--------KLTEPQQLLSGLQHCHDR 239
L G ++ L LV+ +M L +S +G + Q +G+ H+
Sbjct: 95 LLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATD 298
+HRD+K +N+L+D+ KI+DFGLA + + SR+V T Y APE L G +
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG--E 210
Query: 299 YGVGIDLWSAGCLLAEMFLGRP 320
D++S G +L E+ G P
Sbjct: 211 ITPKSDIYSFGVVLLEIITGLP 232
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ Y+ + +G G + V A + VA+K++ + + S+ + +EI + + HP
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHP 73
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQ----TDLAR-IISNPE---GKLTEP------QQLL 230
NIV + ++ L+LV + + D+ + I++ E G L E +++L
Sbjct: 74 NIVSY--YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 231 SGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSP------NKKRPLTSRVVT 284
GL++ H G +HRDVK N+L+ ++G ++IADFG++ + + NK R + V T
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR--KTFVGT 189
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLG 318
+ APE++ Y D+WS G E+ G
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 40/225 (17%)
Query: 128 DKIDKVGQGTYSNVYKA-----LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ + +G+G + V++A L + +VA+K +K + S F RE ++ + D
Sbjct: 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ-REAALMAEFD 108
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFM---------------------QTDL---ARIIS- 217
+PNIVKL G+ + + L+FE+M +DL AR+ S
Sbjct: 109 NPNIVKLLGVCA--VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 218 -----NPEGKLTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA-NYFS 271
+ +L +Q+ +G+ + +R +HRD+ N L+ +N V+KIADFGL+ N +S
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 272 PNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
+ + + + + + PE + Y D+W+ G +L E+F
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIF 270
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 14/222 (6%)
Query: 108 TDNIPREVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHS 167
T+N+ + +A + + Y +++G+G +S V + + + + A K +
Sbjct: 15 TENLYFQXMATCT-RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD 73
Query: 168 VKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVF------EFMQTDLARIISNPEG 221
+ + RE I + L HPNIV+L + + YLVF E + +AR +
Sbjct: 74 HQKLEREARICRLLKHPNIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEAD 131
Query: 222 KLTEPQQLLSGLQHCHDRGILHRDVKGSNLLID---KNGVLKIADFGLANYFSPNKKRPL 278
Q+L + H H I+HRD+K NLL+ K +K+ADFGLA +++
Sbjct: 132 ASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-GEQQAW 190
Query: 279 TSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
T Y +PE +L YG +D+W+ G +L + +G P
Sbjct: 191 FGFAGTPGYLSPE-VLRKDPYGKPVDIWACGVILYILLVGYP 231
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
+ Y+ + +G G + V A + VA+K++ + + S+ + +EI + + HP
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHP 68
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQ----TDLAR-IISNPE---GKLTEP------QQLL 230
NIV + ++ L+LV + + D+ + I++ E G L E +++L
Sbjct: 69 NIVSY--YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 231 SGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSP------NKKRPLTSRVVT 284
GL++ H G +HRDVK N+L+ ++G ++IADFG++ + + NK R + V T
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR--KTFVGT 184
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLG 318
+ APE++ Y D+WS G E+ G
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 18/227 (7%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
A+ + I ++G+G Y V K +G+I+A+K+++ + + + + ++ +D
Sbjct: 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 109
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGK-LTEPQQLLS--------GLQ 234
P V G A R + +++ E M T L + K T P+ +L L+
Sbjct: 110 PFTVTFYG-ALFR-EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 167
Query: 235 HCHDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
H H + ++HRDVK SN+LI+ G +K+ DFG++ Y + + + + Y APE +
Sbjct: 168 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP--YMAPERI 225
Query: 294 ---LGATDYGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIFK 336
L Y V D+WS G + E+ + R P T +QL ++ +
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEG 191
++G+G++ V++ D+ TG A+KKV+ + F E++ L P IV L G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------FRVEELVACAGLSSPRIVPLYG 131
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISN----PEGK-LTEPQQLLSGLQHCHDRGILHRD 245
++++ E ++ L ++I PE + L Q L GL++ H R ILH D
Sbjct: 132 AVREGPWVNIFM--ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 189
Query: 246 VKGSNLLIDKNGV-LKIADFGLANYFSPN--KKRPLTSRVV--TLWYRAPELLLGATDYG 300
VK N+L+ +G + DFG A P+ K LT + T + APE+++G
Sbjct: 190 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 248
Query: 301 VGIDLWSAGCLLAEMFLG 318
+D+WS+ C++ M G
Sbjct: 249 AKVDIWSSCCMMLHMLNG 266
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 29/232 (12%)
Query: 112 PREVLAGLVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFM 171
P E A +P+ + +K K+G G + V+ A K VA+K +K + SV+
Sbjct: 171 PWEKDAWEIPRESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGS---MSVEAF 224
Query: 172 AREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFM-QTDLARIISNPEG------KLT 224
E +++ L H +VKL + T +Y++ EFM + L + + EG KL
Sbjct: 225 LAEANVMKTLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 281
Query: 225 E-PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV 283
+ Q+ G+ R +HRD++ +N+L+ + V KIADFGLA K P+
Sbjct: 282 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV---GAKFPIK---- 334
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRI 334
+ APE + + + D+WS G LL E+ GR PG + E + +
Sbjct: 335 ---WTAPE-AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 382
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 111 IPREVLAGLVPKSAESYDKIDKVGQGTYSNVYKA--LDRDTGKIVALKKVKFDT-SEPHS 167
+PR L ++ S ++ + ++G G + V+ L++D VA+K +K + SE
Sbjct: 15 VPRGSLHMVIDPSELTF--VQEIGSGQFGLVHLGYWLNKDK---VAIKTIKEGSMSEDDF 69
Query: 168 VKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQ----TDLARI---ISNPE 220
++ E ++ KL HP +V+L G+ Q + LVFEFM+ +D R + E
Sbjct: 70 IE----EAEVMMKLSHPKLVQLYGVCLE--QAPICLVFEFMEHGCLSDYLRTQRGLFAAE 123
Query: 221 GKLTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS 280
L + G+ + + ++HRD+ N L+ +N V+K++DFG+ + ++ T
Sbjct: 124 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 183
Query: 281 RVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
+ + +PE + + Y D+WS G L+ E+F
Sbjct: 184 TKFPVKWASPE-VFSFSRYSSKSDVWSFGVLMWEVF 218
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVK--FDTSEPHSVKFMAREIMILQKLDHPNIVK 188
+K+G+G + VYK +T VA+KK+ D + + +EI ++ K H N+V+
Sbjct: 37 NKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 189 LEGLATSRMQYSLYLVFEFM-QTDLARIISNPEG--------KLTEPQQLLSGLQHCHDR 239
L G ++ L LV+ +M L +S +G + Q +G+ H+
Sbjct: 95 LLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATD 298
+HRD+K +N+L+D+ KI+DFGLA + + R+V T Y APE L G +
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG--E 210
Query: 299 YGVGIDLWSAGCLLAEMFLGRP 320
D++S G +L E+ G P
Sbjct: 211 ITPKSDIYSFGVVLLEIITGLP 232
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 18/227 (7%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
A+ + I ++G+G Y V K +G+I+A+K+++ + + + + ++ +D
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 65
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGK-LTEPQQLLS--------GLQ 234
P V G A R + +++ E M T L + K T P+ +L L+
Sbjct: 66 PFTVTFYG-ALFR-EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 123
Query: 235 HCHDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
H H + ++HRDVK SN+LI+ G +K+ DFG++ Y + + + + Y APE +
Sbjct: 124 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP--YMAPERI 181
Query: 294 ---LGATDYGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIFK 336
L Y V D+WS G + E+ + R P T +QL ++ +
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++ + +G+GT+ V ++ TG+ A+K +K + V E +LQ HP
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 186 IVKLEGLATSRMQYSLYLVFE-------FMQTDLARIISNPEGKLTEPQQLLSGLQHCH- 237
+ L+ + + L V E F R+ S + +++S L + H
Sbjct: 210 LTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-GAEIVSALDYLHS 266
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
++ +++RD+K NL++DK+G +KI DFGL + + T Y APE +L
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKTFCGTPEYLAPE-VLEDN 324
Query: 298 DYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++ + +G+GT+ V ++ TG+ A+K +K + V E +LQ HP
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 212
Query: 186 IVKLEGLATSRMQYSLYLVFE-------FMQTDLARIISNPEGKLTEPQQLLSGLQHCH- 237
+ L+ + + L V E F R+ S + +++S L + H
Sbjct: 213 LTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-GAEIVSALDYLHS 269
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
++ +++RD+K NL++DK+G +KI DFGL + + T Y APE +L
Sbjct: 270 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKTFCGTPEYLAPE-VLEDN 327
Query: 298 DYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVK--FDTSEPHSVKFMAREIMILQKLDHPNIVK 188
+K+G+G + VYK +T VA+KK+ D + + +EI ++ K H N+V+
Sbjct: 31 NKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 88
Query: 189 LEGLATSRMQYSLYLVFEFM-QTDLARIISNPEG--------KLTEPQQLLSGLQHCHDR 239
L G ++ L LV+ +M L +S +G + Q +G+ H+
Sbjct: 89 LLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 146
Query: 240 GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATD 298
+HRD+K +N+L+D+ KI+DFGLA + + R+V T Y APE L G +
Sbjct: 147 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG--E 204
Query: 299 YGVGIDLWSAGCLLAEMFLGRP 320
D++S G +L E+ G P
Sbjct: 205 ITPKSDIYSFGVVLLEIITGLP 226
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 39/247 (15%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
+ A +++I +GQG + V KA + + A+KK++ T E S + E+ +L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLST--ILSEVXLLASL 59
Query: 182 DHPNIVKLEGLATSRMQY-----------SLYLVFEFMQTDLARIISNPEGKLTEP---- 226
+H +V+ R + +L++ E+ + + + E +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 227 ---QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS------------ 271
+Q+L L + H +GI+HR++K N+ ID++ +KI DFGLA
Sbjct: 120 RLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 272 -PNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQ 330
P LTS + T Y A E+L G Y ID +S G + E I P T E+
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEX-----IYPFSTGXER 234
Query: 331 LHRIFKL 337
++ + KL
Sbjct: 235 VNILKKL 241
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 129 KIDKV-GQGTYSNVYKALDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
KI++V G G + V + GK VA+K +K +E F++ E I+ + DHP
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLS-EASIMGQFDHP 68
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQQ------LLSGLQHCH 237
N++ LEG+ T + ++ EFM+ L + +G+ T Q + +G+++
Sbjct: 69 NVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 126
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRV----VTLWYRAPELL 293
D +HR + N+L++ N V K++DFGL+ + + P + + + + APE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE-A 185
Query: 294 LGATDYGVGIDLWSAGCLLAEMF 316
+ + D+WS G ++ E+
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVM 208
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 43/239 (17%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-------------------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+ D+ R+ PE ++T
Sbjct: 103 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRV---PEEQMTFK 157
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS--PNKKRPL 278
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA + K+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 279 TSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
R+ W APE L Y D+WS G L+ E+F LG PG VE+L ++ K
Sbjct: 218 NGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLK 273
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
++ ++D +G G + VYK + RD K VALK+ ++S+ E + +
Sbjct: 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKRRTPESSQGIEEFETEIETLSFCR- 93
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQ----------TDLARIISNPEGKLTEPQQLLS 231
HP++V L G R + + L++++M+ +DL + + E +L
Sbjct: 94 -HPHLVSLIGFCDERNE--MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAP 290
GL + H R I+HRDVK N+L+D+N V KI DFG++ + + L V TL Y P
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 291 ELLLGA--TDYGVGIDLWSAGCLLAEMFLGR 319
E + T+ D++S G +L E+ R
Sbjct: 211 EYFIKGRLTEKS---DVYSFGVVLFEVLCAR 238
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 131 DKVGQGTYSNVYKA-LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKL-DHPNIV 187
D +G+G + V KA + +D ++ A+K++K S+ F A E+ +L KL HPNI+
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF-AGELEVLCKLGHHPNII 89
Query: 188 KLEGLATSRMQYSLYLVFEF---------------MQTDLARIISNPEGKLTEPQQLLS- 231
L G R LYL E+ ++TD A I+N QQLL
Sbjct: 90 NLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 232 ------GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTL 285
G+ + + +HRD+ N+L+ +N V KIADFGL+ K+ + R+
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GRLPVR 206
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRI 334
W L + Y D+WS G LL E+ LG G T E ++
Sbjct: 207 WMAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 131 DKVGQGTYSNVYKA-LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKL-DHPNIV 187
D +G+G + V KA + +D ++ A+K++K S+ F A E+ +L KL HPNI+
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF-AGELEVLCKLGHHPNII 79
Query: 188 KLEGLATSRMQYSLYLVFEF---------------MQTDLARIISNPEGKLTEPQQLLS- 231
L G R LYL E+ ++TD A I+N QQLL
Sbjct: 80 NLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 232 ------GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTL 285
G+ + + +HRD+ N+L+ +N V KIADFGL+ K+ + R+
Sbjct: 138 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GRLPVR 196
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRI 334
W L + Y D+WS G LL E+ LG G T E ++
Sbjct: 197 WMAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 244
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 43/239 (17%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-------------------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+ D+ R+ PE ++T
Sbjct: 103 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 157
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFS--PNKKRPL 278
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA + K+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 279 TSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
R+ W APE L Y D+WS G L+ E+F LG PG VE+L ++ K
Sbjct: 218 NGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLK 273
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 51/243 (20%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-------------------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+ D+ R+ PE ++T
Sbjct: 103 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 157
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNK 274
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA +Y+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY---- 213
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHR 333
K+ R+ W APE L Y D+WS G L+ E+F LG PG VE+L +
Sbjct: 214 KKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFK 270
Query: 334 IFK 336
+ K
Sbjct: 271 LLK 273
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 51/243 (20%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-------------------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+ D+ R+ PE ++T
Sbjct: 149 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 203
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNK 274
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA +Y+
Sbjct: 204 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY---- 259
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHR 333
K+ R+ W APE L Y D+WS G L+ E+F LG PG VE+L +
Sbjct: 260 KKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFK 316
Query: 334 IFK 336
+ K
Sbjct: 317 LLK 319
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVK--FDTSEPHSVKFMAREIMILQKLDHPNIVK 188
+K G+G + VYK +T VA+KK+ D + + +EI + K H N+V+
Sbjct: 28 NKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 189 LEGLATSRMQYSLYLVFEFMQTDLARIISNPEG--------KLTEPQQLLSGLQHCHDRG 240
L G ++ L V+ + L R+ S +G + Q +G+ H+
Sbjct: 86 LLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHXRCKIAQGAANGINFLHENH 144
Query: 241 ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGATDY 299
+HRD+K +N+L+D+ KI+DFGLA + SR+V T Y APE L G +
Sbjct: 145 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG--EI 202
Query: 300 GVGIDLWSAGCLLAEMFLGRPIM 322
D++S G +L E+ G P +
Sbjct: 203 TPKSDIYSFGVVLLEIITGLPAV 225
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL 181
++ ++D +G G + VYK + RD K VALK+ ++S+ E + +
Sbjct: 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKRRTPESSQGIEEFETEIETLSFCR- 93
Query: 182 DHPNIVKLEGLATSRMQYSLYLVFEFMQ----------TDLARIISNPEGKLTEPQQLLS 231
HP++V L G R + + L++++M+ +DL + + E +L
Sbjct: 94 -HPHLVSLIGFCDERNE--MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAP 290
GL + H R I+HRDVK N+L+D+N V KI DFG++ + + L V TL Y P
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP 210
Query: 291 ELLLGA--TDYGVGIDLWSAGCLLAEMFLGR 319
E + T+ D++S G +L E+ R
Sbjct: 211 EYFIKGRLTEKS---DVYSFGVVLFEVLCAR 238
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 51/243 (20%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-------------------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+ D+ R+ PE ++T
Sbjct: 95 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 149
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNK 274
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA +Y+
Sbjct: 150 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY---- 205
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHR 333
K+ R+ W APE L Y D+WS G L+ E+F LG PG VE+L +
Sbjct: 206 KKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFK 262
Query: 334 IFK 336
+ K
Sbjct: 263 LLK 265
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 51/243 (20%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-------------------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+ D+ R+ PE ++T
Sbjct: 92 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 146
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNK 274
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA +Y+
Sbjct: 147 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY---- 202
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHR 333
K+ R+ W APE L Y D+WS G L+ E+F LG PG VE+L +
Sbjct: 203 KKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFK 259
Query: 334 IFK 336
+ K
Sbjct: 260 LLK 262
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ ++ + +G+G++ V DT K+ A+K + K E + V+ + +E+ I+Q L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 184 PNIVKL--------------EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQL 229
P +V L + L ++Y L F + + I +L
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC----------EL 124
Query: 230 LSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRA 289
+ L + ++ I+HRD+K N+L+D++G + I DF +A ++ +T+ T Y A
Sbjct: 125 VMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITTMAGTKPYMA 182
Query: 290 PELLLG--ATDYGVGIDLWSAGCLLAEMFLGR 319
PE+ Y +D WS G E+ GR
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA-REIMILQ 179
P + ++ + +G+G + V R TGK+ A KK++ + + MA E IL+
Sbjct: 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE 239
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISN------PEGK-LTEPQQLLS 231
K++ +V L + +L LV M DL I + PE + + ++
Sbjct: 240 KVNSRFVVSLA--YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
GL+ H I++RD+K N+L+D +G ++I+D GLA + + + RV T+ Y APE
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPE 355
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGR 319
++ Y D W+ GCLL EM G+
Sbjct: 356 VVKNER-YTFSPDWWALGCLLYEMIAGQ 382
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 51/243 (20%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-------------------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+ D+ R+ PE ++T
Sbjct: 90 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 144
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNK 274
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA +Y+
Sbjct: 145 DLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYY---- 200
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHR 333
K+ R+ W APE L Y D+WS G L+ E+F LG PG VE+L +
Sbjct: 201 KKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFK 257
Query: 334 IFK 336
+ K
Sbjct: 258 LLK 260
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 51/243 (20%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-------------------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+ D+ R+ PE ++T
Sbjct: 103 IITLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 157
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNK 274
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA +Y+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY---- 213
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHR 333
K+ R+ W APE L Y D+WS G L+ E+F LG PG VE+L +
Sbjct: 214 KKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFK 270
Query: 334 IFK 336
+ K
Sbjct: 271 LLK 273
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 51/243 (20%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-------------------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+ D+ R+ PE ++T
Sbjct: 103 IIHLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 157
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNK 274
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA +Y+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY---- 213
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHR 333
K+ R+ W APE L Y D+WS G L+ E+F LG PG VE+L +
Sbjct: 214 KKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFK 270
Query: 334 IFK 336
+ K
Sbjct: 271 LLK 273
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 121 PKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA-REIMILQ 179
P + ++ + +G+G + V R TGK+ A KK++ + + MA E IL+
Sbjct: 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE 239
Query: 180 KLDHPNIVKLEGLATSRMQYSLYLVFEFMQT-DLARIISN------PEGK-LTEPQQLLS 231
K++ +V L + +L LV M DL I + PE + + ++
Sbjct: 240 KVNSRFVVSLA--YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
GL+ H I++RD+K N+L+D +G ++I+D GLA + + + RV T+ Y APE
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPE 355
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGR 319
++ Y D W+ GCLL EM G+
Sbjct: 356 VVKNER-YTFSPDWWALGCLLYEMIAGQ 382
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 130 IDKVGQGTYSNVYKA--LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+ ++G G + V+ L++D VA+K ++ S + E ++ KL HP +V
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDK---VAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----TDLARI---ISNPEGKLTEPQQLLSGLQHCHDRG 240
+L G+ Q + LVFEFM+ +D R + E L + G+ + +
Sbjct: 66 QLYGVCLE--QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 241 ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYG 300
++HRD+ N L+ +N V+K++DFG+ + ++ T + + +PE + + Y
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYS 182
Query: 301 VGIDLWSAGCLLAEMF 316
D+WS G L+ E+F
Sbjct: 183 SKSDVWSFGVLMWEVF 198
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 130 IDKVGQGTYSNVYKA--LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+ ++G G + V+ L++D VA+K ++ S + E ++ KL HP +V
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDK---VAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----TDLARI---ISNPEGKLTEPQQLLSGLQHCHDRG 240
+L G+ Q + LVFEFM+ +D R + E L + G+ + +
Sbjct: 66 QLYGVCLE--QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 241 ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYG 300
++HRD+ N L+ +N V+K++DFG+ + ++ T + + +PE + + Y
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYS 182
Query: 301 VGIDLWSAGCLLAEMF 316
D+WS G L+ E+F
Sbjct: 183 SKSDVWSFGVLMWEVF 198
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 130 IDKVGQGTYSNVYKA--LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+ ++G G + V+ L++D VA+K ++ S + E ++ KL HP +V
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDK---VAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----TDLARI---ISNPEGKLTEPQQLLSGLQHCHDRG 240
+L G+ Q + LVFEFM+ +D R + E L + G+ + +
Sbjct: 69 QLYGVCLE--QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 241 ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYG 300
++HRD+ N L+ +N V+K++DFG+ + ++ T + + +PE + + Y
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYS 185
Query: 301 VGIDLWSAGCLLAEMF 316
D+WS G L+ E+F
Sbjct: 186 SKSDVWSFGVLMWEVF 201
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 130 IDKVGQGTYSNVYKA--LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+ ++G G + V+ L++D VA+K ++ S + E ++ KL HP +V
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDK---VAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----TDLARI---ISNPEGKLTEPQQLLSGLQHCHDRG 240
+L G+ Q + LVFEFM+ +D R + E L + G+ + +
Sbjct: 64 QLYGVCLE--QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 241 ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYG 300
++HRD+ N L+ +N V+K++DFG+ + ++ T + + +PE + + Y
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYS 180
Query: 301 VGIDLWSAGCLLAEMF 316
D+WS G L+ E+F
Sbjct: 181 SKSDVWSFGVLMWEVF 196
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 51/243 (20%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-------------------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+ D+ R+ PE ++T
Sbjct: 103 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 157
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNK 274
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA +Y+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY---- 213
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHR 333
K R+ W APE L Y D+WS G L+ E+F LG PG VE+L +
Sbjct: 214 KNTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFK 270
Query: 334 IFK 336
+ K
Sbjct: 271 LLK 273
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 26/200 (13%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLE 190
+K+G G++ V++A G VA+K + V RE+ I+++L HPNIV
Sbjct: 43 EKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 191 GLATSRMQYSL---YL----VFEFMQTDLARIISNPEGKLTEPQQLLSGLQHCHDRG--I 241
G T S+ YL ++ + AR + +L+ + G+ + H+R I
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGL----ANYFSPNKKRPLTSRVVTLWYRAPELLLG-- 295
+HRD+K NLL+DK +K+ DFGL A+ F +K T + APE+L
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPE-----WMAPEVLRDEP 215
Query: 296 ----ATDYGVGIDLWSAGCL 311
+ Y G+ LW L
Sbjct: 216 SNEKSDVYSFGVILWELATL 235
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 51/243 (20%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-------------------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+ D+ R+ PE ++T
Sbjct: 103 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 157
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNK 274
QL G+++ + +HRD+ N+L+ +N V++IADFGLA +Y+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYY---- 213
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHR 333
K+ R+ W APE L Y D+WS G L+ E+F LG PG VE+L +
Sbjct: 214 KKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFK 270
Query: 334 IFK 336
+ K
Sbjct: 271 LLK 273
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++ + +G+GT+ V ++ TG+ A+K +K + V E +LQ HP
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 70
Query: 186 IVKLEGLATSRMQYSLYLVFE-------FMQTDLARIISNPEGKLTEPQQLLSGLQHCH- 237
+ L+ + + L V E F R+ S + +++S L + H
Sbjct: 71 LTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-GAEIVSALDYLHS 127
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
++ +++RD+K NL++DK+G +KI DFGL + T Y APE +L
Sbjct: 128 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYLAPE-VLEDN 185
Query: 298 DYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++ + +G+GT+ V ++ TG+ A+K +K + V E +LQ HP
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 186 IVKLEGLATSRMQYSLYLVFE-------FMQTDLARIISNPEGKLTEPQQLLSGLQHCH- 237
+ L+ + + L V E F R+ S + +++S L + H
Sbjct: 72 LTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-GAEIVSALDYLHS 128
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
++ +++RD+K NL++DK+G +KI DFGL + T Y APE +L
Sbjct: 129 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYLAPE-VLEDN 186
Query: 298 DYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGR 208
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++ + +G+GT+ V ++ TG+ A+K +K + V E +LQ HP
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 186 IVKLEGLATSRMQYSLYLVFE-------FMQTDLARIISNPEGKLTEPQQLLSGLQHCH- 237
+ L+ + + L V E F R+ S + +++S L + H
Sbjct: 70 LTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-GAEIVSALDYLHS 126
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
++ +++RD+K NL++DK+G +KI DFGL + T Y APE +L
Sbjct: 127 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYLAPE-VLEDN 184
Query: 298 DYGVGIDLWSAGCLLAEMFLGR 319
DYG +D W G ++ EM GR
Sbjct: 185 DYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 118 GLVPKSA-------ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKF 170
GLVP+ + + Y + +G G+YS + + + T A+K + +P
Sbjct: 13 GLVPRGSHMNLVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP----- 67
Query: 171 MAREIMILQKL-DHPNIVKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQ 227
+ EI IL + HPNI+ L+ + +YLV E M+ L +I+ E
Sbjct: 68 -SEEIEILLRYGQHPNIITLKDVYDDGKH--VYLVTELMRGGELLDKILRQKFFSEREAS 124
Query: 228 QLLSGL----QHCHDRGILHRDVKGSNLL-IDKNG---VLKIADFGLANYFSPNKKRPLT 279
+L + ++ H +G++HRD+K SN+L +D++G L+I DFG A +T
Sbjct: 125 FVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 280 SRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLG-RPIM--PGRTEVEQLHRI-- 334
T + APE +L Y G D+WS G LL M G P P T E L RI
Sbjct: 185 P-CYTANFVAPE-VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS 242
Query: 335 --FKLCG 339
F L G
Sbjct: 243 GKFTLSG 249
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 131 DKVGQGTYSNVYKA-LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKL-DHPNIV 187
D +G+G + V KA + +D ++ A+K++K S+ F A E+ +L KL HPNI+
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF-AGELEVLCKLGHHPNII 86
Query: 188 KLEGLATSRMQYSLYLVFEF---------------MQTDLARIISNPEGKLTEPQQLLS- 231
L G R LYL E+ ++TD A I+N QQLL
Sbjct: 87 NLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 232 ------GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTL 285
G+ + + +HR++ N+L+ +N V KIADFGL+ K+ + R+
Sbjct: 145 AADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GRLPVR 203
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRI 334
W L + Y D+WS G LL E+ LG G T E ++
Sbjct: 204 WMAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 251
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 43/262 (16%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 188 KLEGLATSRMQYSLYLVFEFMQ------------------TDLARIISNPEGKLTEPQQL 229
L G A ++ L ++ EF + DL + E + Q+
Sbjct: 95 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 230 LSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSRVVTLWY 287
G++ R +HRD+ N+L+ + V+KI DFGLA Y P+ R +R+ W
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 213
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
APE + Y + D+WS G LL E+F LG PG E++
Sbjct: 214 -APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDEEFC 257
Query: 347 KKLRLSTTFRPPQSYKPRLFEA 368
++L+ T R P P +++
Sbjct: 258 RRLKEGTRMRAPDYTTPEMYQT 279
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 47/267 (17%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----------------------TDLARIISNPEGKLTE 225
L G A ++ L ++ EF + DL + E +
Sbjct: 95 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 226 PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSRVV 283
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA Y P+ R +R+
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP 213
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPS 342
W APE + Y + D+WS G LL E+F LG PG
Sbjct: 214 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 257
Query: 343 EDYWKKLRLSTTFRPPQSYKPRLFEAF 369
E++ ++L+ T R P P +++
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTM 284
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 133 VGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + +V++ + + VA+K K TS+ KF+ +E + +++ DHP+IVKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 76
Query: 190 EGLATSRMQYSLYLVFE---------FMQT-----DLARIISNPEGKLTEPQQLLSGLQH 235
G+ T + ++++ E F+Q DLA +I QL + L +
Sbjct: 77 IGVIT---ENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-------LYAYQLSTALAY 126
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +HRD+ N+L+ N +K+ DFGL+ Y + + + + + APE +
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE-SIN 185
Query: 296 ATDYGVGIDLWSAGCLLAEMFL 317
+ D+W G + E+ +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILM 207
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 133 VGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + +V++ + + VA+K K TS+ KF+ +E + +++ DHP+IVKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 456
Query: 190 EGLATSRMQYSLYLVFE---------FMQT-----DLARIISNPEGKLTEPQQLLSGLQH 235
G+ T + ++++ E F+Q DLA +I QL + L +
Sbjct: 457 IGVIT---ENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-------LYAYQLSTALAY 506
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +HRD+ N+L+ N +K+ DFGL+ Y + + + + + APE +
Sbjct: 507 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SIN 565
Query: 296 ATDYGVGIDLWSAGCLLAEMFL 317
+ D+W G + E+ +
Sbjct: 566 FRRFTSASDVWMFGVCMWEILM 587
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 173 REIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS- 231
+E + KL HP +VK G+ + +Y +Y+V E++ GK EP QLL
Sbjct: 52 QEAQTMMKLSHPKLVKFYGVCSK--EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM 109
Query: 232 ------GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTL 285
G+ +HRD+ N L+D++ +K++DFG+ Y ++ +
Sbjct: 110 CYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPV 169
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGR--------TEVEQLHRIFK 336
+ APE + Y D+W+ G L+ E+F LG+ MP +V Q HR+++
Sbjct: 170 KWSAPE-VFHYFKYSSKSDVWAFGILMWEVFSLGK--MPYDLYTNSEVVLKVSQGHRLYR 226
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 47/267 (17%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----------------------TDLARIISNPEGKLTE 225
L G A ++ L ++ EF + DL + E +
Sbjct: 97 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 226 PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSRVV 283
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA Y P+ R +R+
Sbjct: 156 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPS 342
W APE + Y + D+WS G LL E+F LG PG
Sbjct: 216 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 259
Query: 343 EDYWKKLRLSTTFRPPQSYKPRLFEAF 369
E++ ++L+ T R P P +++
Sbjct: 260 EEFCRRLKEGTRMRAPDYTTPEMYQTM 286
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 51/243 (20%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 186 IVKLEGLATSRMQYSLYLVF---------EFMQT----------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+++ D+ R+ PE ++T
Sbjct: 103 IINLLGACTQ--DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 157
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNK 274
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA +Y+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY---- 213
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHR 333
K+ R+ W APE L Y D+WS G L+ E+F LG PG VE+L +
Sbjct: 214 KKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFK 270
Query: 334 IFK 336
+ K
Sbjct: 271 LLK 273
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 45/264 (17%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 188 KLEGLATS---------------------RMQYSLYLVFEFMQTDLARIISNPEGKLTEP 226
L G T R + + ++ ++ DL + E +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSRVVT 284
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA Y P+ R +R+
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPSE 343
W APE + Y + D+WS G LL E+F LG PG E
Sbjct: 206 KWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDE 249
Query: 344 DYWKKLRLSTTFRPPQSYKPRLFE 367
++ ++L+ T R P P +++
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQ 273
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 51/243 (20%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A +D+D K VA+K +K D +E ++ M+ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 186 IVKLEGLATSRMQYSLYLVF---------EFMQT----------DLARIISNPEGKLTEP 226
I+ L G T LY++ E+++ D+ R+ PE ++T
Sbjct: 103 IINLLGACTQ--DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRV---PEEQMTFK 157
Query: 227 Q------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNK 274
QL G+++ + +HRD+ N+L+ +N V+KIADFGLA +Y+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY---- 213
Query: 275 KRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHR 333
K+ R+ W APE L Y D+WS G L+ E+F LG PG VE+L +
Sbjct: 214 KKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFK 270
Query: 334 IFK 336
+ K
Sbjct: 271 LLK 273
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 45/265 (16%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 188 KLEGLATS---------------------RMQYSLYLVFEFMQTDLARIISNPEGKLTEP 226
L G T R + + ++ ++ DL + E +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSRVVT 284
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA Y P+ R +R+
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPSE 343
W APE + Y + D+WS G LL E+F LG PG E
Sbjct: 206 KWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDE 249
Query: 344 DYWKKLRLSTTFRPPQSYKPRLFEA 368
++ ++L+ T R P P +++
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQT 274
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 47/267 (17%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----------------------TDLARIISNPEGKLTE 225
L G A ++ L ++ EF + DL + E +
Sbjct: 95 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 226 PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSRVV 283
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA Y P+ R +R+
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 213
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPS 342
W APE + Y + D+WS G LL E+F LG PG
Sbjct: 214 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 257
Query: 343 EDYWKKLRLSTTFRPPQSYKPRLFEAF 369
E++ ++L+ T R P P +++
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTM 284
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 47/267 (17%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----------------------TDLARIISNPEGKLTE 225
L G A ++ L ++ EF + DL + E +
Sbjct: 132 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 226 PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSRVV 283
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA Y P+ R +R+
Sbjct: 191 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 250
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPS 342
W APE + Y + D+WS G LL E+F LG PG
Sbjct: 251 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 294
Query: 343 EDYWKKLRLSTTFRPPQSYKPRLFEAF 369
E++ ++L+ T R P P +++
Sbjct: 295 EEFCRRLKEGTRMRAPDYTTPEMYQTM 321
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 26/200 (13%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLE 190
+K+G G++ V++A G VA+K + V RE+ I+++L HPNIV
Sbjct: 43 EKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 191 GLATSRMQYSL---YL----VFEFMQTDLARIISNPEGKLTEPQQLLSGLQHCHDRG--I 241
G T S+ YL ++ + AR + +L+ + G+ + H+R I
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGL----ANYFSPNKKRPLTSRVVTLWYRAPELLLG-- 295
+HR++K NLL+DK +K+ DFGL A+ F +K T + APE+L
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE-----WMAPEVLRDEP 215
Query: 296 ----ATDYGVGIDLWSAGCL 311
+ Y G+ LW L
Sbjct: 216 SNEKSDVYSFGVILWELATL 235
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 133 VGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + +V++ + + VA+K K TS+ KF+ +E + +++ DHP+IVKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 76
Query: 190 EGLATSRMQYSLYLVFE---------FMQT-----DLARIISNPEGKLTEPQQLLSGLQH 235
G+ T + ++++ E F+Q DLA +I QL + L +
Sbjct: 77 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-------LYAYQLSTALAY 126
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +HRD+ N+L+ N +K+ DFGL+ Y + + + + + APE +
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SIN 185
Query: 296 ATDYGVGIDLWSAGCLLAEMFL 317
+ D+W G + E+ +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILM 207
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 41/296 (13%)
Query: 129 KIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
K + +G G + V+K + TG +A K +K T + + EI ++ +LDH N+++
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIK--TRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 189 LEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTE------PQQLLSGLQHCHDRGI 241
L S+ + LV E++ +L I + LTE +Q+ G++H H I
Sbjct: 151 LYDAFESK--NDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI 208
Query: 242 LHRDVKGSNLL-IDKNG-VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDY 299
LH D+K N+L ++++ +KI DFGLA + P +K L T + APE++ D+
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVNFGTPEFLAPEVV--NYDF 264
Query: 300 -GVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRPP 358
D+WS G + + G G + E L+ I C ED
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA-CRWDLED-------------- 309
Query: 359 QSYKPRLFEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFFFTSPLACDLSG 414
E F + E + ++R SA+ ALK+ + L LS
Sbjct: 310 --------EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLSA 357
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 133 VGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + +V++ + + VA+K K TS+ KF+ +E + +++ DHP+IVKL
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 79
Query: 190 EGLATSRMQYSLYLVFE---------FMQT-----DLARIISNPEGKLTEPQQLLSGLQH 235
G+ T + ++++ E F+Q DLA +I QL + L +
Sbjct: 80 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-------LYAYQLSTALAY 129
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +HRD+ N+L+ N +K+ DFGL+ Y + + + + + APE +
Sbjct: 130 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SIN 188
Query: 296 ATDYGVGIDLWSAGCLLAEMFL 317
+ D+W G + E+ +
Sbjct: 189 FRRFTSASDVWMFGVCMWEILM 210
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A LD+D VA+K +K D +E ++ M+ H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 186 IVKLEGLATSRMQYSLYLVFEFM-QTDLARIIS---------------NPEGKLTEPQ-- 227
I+ L G T LY++ E+ + +L + NPE +L+
Sbjct: 85 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 228 ----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRP 277
Q+ G+++ + +HRD+ N+L+ ++ V+KIADFGLA +Y+ K+
Sbjct: 143 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----KKT 198
Query: 278 LTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
R+ W APE L Y D+WS G LL E+F LG PG VE+L ++ K
Sbjct: 199 TNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 255
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A LD+D VA+K +K D +E ++ M+ H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 186 IVKLEGLATSRMQYSLYLVFEFM-QTDLARIIS---------------NPEGKLTEPQ-- 227
I+ L G T LY++ E+ + +L + NPE +L+
Sbjct: 88 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 228 ----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRP 277
Q+ G+++ + +HRD+ N+L+ ++ V+KIADFGLA +Y+ K+
Sbjct: 146 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----KKT 201
Query: 278 LTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
R+ W APE L Y D+WS G LL E+F LG PG VE+L ++ K
Sbjct: 202 TNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 258
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 37/236 (15%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A LD+D VA+K +K D +E ++ M+ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 186 IVKLEGLATSRMQYSLYLVFEFM-QTDLARIIS---------------NPEGKLTEPQ-- 227
I+ L G T LY++ E+ + +L + NPE +L+
Sbjct: 96 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 228 ----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSR 281
Q+ G+++ + +HRD+ N+L+ ++ V+KIADFGLA + K+ R
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGR 213
Query: 282 VVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
+ W APE L Y D+WS G LL E+F LG PG VE+L ++ K
Sbjct: 214 LPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 133 VGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + +V++ + + VA+K K TS+ KF+ +E + +++ DHP+IVKL
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 73
Query: 190 EGLATSRMQYSLYLVFE---------FMQT-----DLARIISNPEGKLTEPQQLLSGLQH 235
G+ T + ++++ E F+Q DLA +I QL + L +
Sbjct: 74 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-------LYAYQLSTALAY 123
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +HRD+ N+L+ N +K+ DFGL+ Y + + + + + APE +
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SIN 182
Query: 296 ATDYGVGIDLWSAGCLLAEMFL 317
+ D+W G + E+ +
Sbjct: 183 FRRFTSASDVWMFGVCMWEILM 204
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 133 VGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + +V++ + + VA+K K TS+ KF+ +E + +++ DHP+IVKL
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 78
Query: 190 EGLATSRMQYSLYLVFE---------FMQT-----DLARIISNPEGKLTEPQQLLSGLQH 235
G+ T + ++++ E F+Q DLA +I QL + L +
Sbjct: 79 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-------LYAYQLSTALAY 128
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +HRD+ N+L+ N +K+ DFGL+ Y + + + + + APE +
Sbjct: 129 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SIN 187
Query: 296 ATDYGVGIDLWSAGCLLAEMFL 317
+ D+W G + E+ +
Sbjct: 188 FRRFTSASDVWMFGVCMWEILM 209
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 133 VGQGTYSNVYKA-LDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
+G G + VYK L +GK VA+K +K +E V F+ E I+ + H NI++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG-EAGIMGQFSHHNIIR 110
Query: 189 LEGLATSRMQYS-LYLVFEFMQTD-LARIISNPEGKLTEPQQ------LLSGLQHCHDRG 240
LEG+ + +Y + ++ E+M+ L + + +G+ + Q + +G+++ +
Sbjct: 111 LEGVIS---KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 241 ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSR--VVTLWYRAPELLLGATD 298
+HRD+ N+L++ N V K++DFGL+ + + T+ + + + APE +
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE-AISYRK 226
Query: 299 YGVGIDLWSAGCLLAEMF 316
+ D+WS G ++ E+
Sbjct: 227 FTSASDVWSFGIVMWEVM 244
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 133 VGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + +V++ + + VA+K K TS+ KF+ +E + +++ DHP+IVKL
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 104
Query: 190 EGLATSRMQYSLYLVFE---------FMQT-----DLARIISNPEGKLTEPQQLLSGLQH 235
G+ T + ++++ E F+Q DLA +I QL + L +
Sbjct: 105 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-------LYAYQLSTALAY 154
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +HRD+ N+L+ N +K+ DFGL+ Y + + + + + APE +
Sbjct: 155 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SIN 213
Query: 296 ATDYGVGIDLWSAGCLLAEMFL 317
+ D+W G + E+ +
Sbjct: 214 FRRFTSASDVWMFGVCMWEILM 235
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A LD+D VA+K +K D +E ++ M+ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 186 IVKLEGLATSRMQYSLYLVFEFM-QTDLARIIS---------------NPEGKLTEPQ-- 227
I+ L G T LY++ E+ + +L + NPE +L+
Sbjct: 96 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 228 ----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRP 277
Q+ G+++ + +HRD+ N+L+ ++ V+KIADFGLA +Y+ K+
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----KKT 209
Query: 278 LTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
R+ W APE L Y D+WS G LL E+F LG PG VE+L ++ K
Sbjct: 210 TNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 133 VGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + +V++ + + VA+K K TS+ KF+ +E + +++ DHP+IVKL
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 81
Query: 190 EGLATSRMQYSLYLVFE---------FMQT-----DLARIISNPEGKLTEPQQLLSGLQH 235
G+ T + ++++ E F+Q DLA +I QL + L +
Sbjct: 82 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-------LYAYQLSTALAY 131
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +HRD+ N+L+ N +K+ DFGL+ Y + + + + + APE +
Sbjct: 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SIN 190
Query: 296 ATDYGVGIDLWSAGCLLAEMFL 317
+ D+W G + E+ +
Sbjct: 191 FRRFTSASDVWMFGVCMWEILM 212
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 43/262 (16%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 188 KLEGLATSRMQYSLYLVFEFMQ------------------TDLARIISNPEGKLTEPQQL 229
L G A ++ L ++ EF + DL + E + Q+
Sbjct: 95 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 230 LSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSRVVTLWY 287
G++ R +HRD+ N+L+ + V+KI DFGLA Y P+ R +R+ W
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWM 213
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
APE + Y + D+WS G LL E+F LG PG E++
Sbjct: 214 -APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDEEFX 257
Query: 347 KKLRLSTTFRPPQSYKPRLFEA 368
++L+ T R P P +++
Sbjct: 258 RRLKEGTRMRAPDYTTPEMYQT 279
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A LD+D VA+K +K D +E ++ M+ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 186 IVKLEGLATSRMQYSLYLVFEFM-QTDLARIIS---------------NPEGKLTEPQ-- 227
I+ L G T LY++ E+ + +L + NPE +L+
Sbjct: 96 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 228 ----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRP 277
Q+ G+++ + +HRD+ N+L+ ++ V+KIADFGLA +Y+ K+
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----KKT 209
Query: 278 LTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
R+ W APE L Y D+WS G LL E+F LG PG VE+L ++ K
Sbjct: 210 TNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A LD+D VA+K +K D +E ++ M+ H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 186 IVKLEGLATSRMQYSLYLVFEFM-QTDLARIIS---------------NPEGKLTEPQ-- 227
I+ L G T LY++ E+ + +L + NPE +L+
Sbjct: 81 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 228 ----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRP 277
Q+ G+++ + +HRD+ N+L+ ++ V+KIADFGLA +Y+ K+
Sbjct: 139 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----KKT 194
Query: 278 LTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
R+ W APE L Y D+WS G LL E+F LG PG VE+L ++ K
Sbjct: 195 TNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 251
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A LD+D VA+K +K D +E ++ M+ H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 186 IVKLEGLATSRMQYSLYLVFEFM-QTDLARIIS---------------NPEGKLTEPQ-- 227
I+ L G T LY++ E+ + +L + NPE +L+
Sbjct: 89 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 228 ----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRP 277
Q+ G+++ + +HRD+ N+L+ ++ V+KIADFGLA +Y+ K+
Sbjct: 147 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----KKT 202
Query: 278 LTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
R+ W APE L Y D+WS G LL E+F LG PG VE+L ++ K
Sbjct: 203 TNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 259
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 133 VGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + +V++ + + VA+K K TS+ KF+ +E + +++ DHP+IVKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 76
Query: 190 EGLATSRMQYSLYLVFE---------FMQT-----DLARIISNPEGKLTEPQQLLSGLQH 235
G+ T + ++++ E F+Q DLA +I QL + L +
Sbjct: 77 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-------LYAYQLSTALAY 126
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +HRD+ N+L+ N +K+ DFGL+ Y + + + + + APE +
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SIN 185
Query: 296 ATDYGVGIDLWSAGCLLAEMFL 317
+ D+W G + E+ +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILM 207
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A LD+D VA+K +K D +E ++ M+ H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 186 IVKLEGLATSRMQYSLYLVFEFM-QTDLARIIS---------------NPEGKLTEPQ-- 227
I+ L G T LY++ E+ + +L + NPE +L+
Sbjct: 137 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 228 ----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRP 277
Q+ G+++ + +HRD+ N+L+ ++ V+KIADFGLA +Y+ K+
Sbjct: 195 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----KKT 250
Query: 278 LTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
R+ W APE L Y D+WS G LL E+F LG PG VE+L ++ K
Sbjct: 251 TNGRLPVKW-MAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 307
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 133 VGQGTYSNVYKA----LDRDTGK---IVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G+G + V A LD+D VA+K +K D +E ++ M+ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 186 IVKLEGLATSRMQYSLYLVFEFM-QTDLARIIS---------------NPEGKLTEPQ-- 227
I+ L G T LY++ E+ + +L + NPE +L+
Sbjct: 96 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 228 ----QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRP 277
Q+ G+++ + +HRD+ N+L+ ++ V+KIADFGLA +Y+ K+
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----KKT 209
Query: 278 LTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
R+ W APE L Y D+WS G LL E+F LG PG VE+L ++ K
Sbjct: 210 TNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 46/266 (17%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 188 KLEGLATSRMQYSLYLVFEFMQ---------------------TDLARIISNPEGKLTEP 226
L G A ++ L ++ EF + DL + E +
Sbjct: 96 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVVT 284
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA P+ R +R+
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPSE 343
W APE + Y + D+WS G LL E+F LG PG E
Sbjct: 215 KWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDE 258
Query: 344 DYWKKLRLSTTFRPPQSYKPRLFEAF 369
++ ++L+ T R P P +++
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTM 284
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 107/234 (45%), Gaps = 28/234 (11%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-D 182
++ Y + +G G+YS + + + T A+K + +P + EI IL +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP------SEEIEILLRYGQ 79
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQQLLSGL----QHC 236
HPNI+ L+ + +YLV E M+ L +I+ E +L + ++
Sbjct: 80 HPNIITLKDVYDDGKH--VYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYL 137
Query: 237 HDRGILHRDVKGSNLL-IDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
H +G++HRD+K SN+L +D++G L+I DFG A +T T + APE
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP-CYTANFVAPE- 195
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLG-RPIM--PGRTEVEQLHRI----FKLCG 339
+L Y G D+WS G LL M G P P T E L RI F L G
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSG 249
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 23/238 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVK----FDTSEPHSVKFMAREIMILQK 180
+ Y+ +++G G ++ V K + TGK A K +K + S + + RE+ IL++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 181 LDHPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSG 232
+ HPNI+ L + ++ L L +F+F LA S E + T+ +Q+L G
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDF----LAEKESLTEDEATQFLKQILDG 141
Query: 233 LQHCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+ + H + I H D+K N +L+DKN +K+ DFG+A+ + + T +
Sbjct: 142 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFV 199
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
APE ++ G+ D+WS G + + G G T+ E L I + E+Y+
Sbjct: 200 APE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYF 256
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 47/265 (17%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----------------------TDLARIISNPEGKLTE 225
L G A ++ L ++ EF + DL + E +
Sbjct: 86 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 226 PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVV 283
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA P+ R +R+
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPS 342
W APE + Y + D+WS G LL E+F LG PG
Sbjct: 205 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 248
Query: 343 EDYWKKLRLSTTFRPPQSYKPRLFE 367
E++ ++L+ T R P P +++
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQ 273
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 23/238 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVK----FDTSEPHSVKFMAREIMILQK 180
+ Y+ +++G G ++ V K + TGK A K +K + S + + RE+ IL++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 181 LDHPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSG 232
+ HPNI+ L + ++ L L +F+F LA S E + T+ +Q+L G
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDF----LAEKESLTEDEATQFLKQILDG 120
Query: 233 LQHCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+ + H + I H D+K N +L+DKN +K+ DFG+A+ + + T +
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFV 178
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
APE ++ G+ D+WS G + + G G T+ E L I + E+Y+
Sbjct: 179 APE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYF 235
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 47/267 (17%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----------------------TDLARIISNPEGKLTE 225
L G A ++ L ++ EF + DL + E +
Sbjct: 95 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 226 PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVV 283
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA P+ R +R+
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPS 342
W APE + Y + D+WS G LL E+F LG PG
Sbjct: 214 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 257
Query: 343 EDYWKKLRLSTTFRPPQSYKPRLFEAF 369
E++ ++L+ T R P P +++
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTM 284
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 45/266 (16%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 188 KLEGLATS---------------------RMQYSLYLVFEFMQTDLARIISNPEGKLTEP 226
L G T R + + ++ ++ DL + E +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 227 QQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVVT 284
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA P+ R +R+
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPSE 343
W APE + Y + D+WS G LL E+F LG PG E
Sbjct: 206 KWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDE 249
Query: 344 DYWKKLRLSTTFRPPQSYKPRLFEAF 369
++ ++L+ T R P P +++
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTM 275
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 23/238 (9%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVK----FDTSEPHSVKFMAREIMILQK 180
+ Y+ +++G G ++ V K + TGK A K +K + S + + RE+ IL++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 181 LDHPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSG 232
+ HPNI+ L + ++ L L +F+F LA S E + T+ +Q+L G
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDF----LAEKESLTEDEATQFLKQILDG 127
Query: 233 LQHCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+ + H + I H D+K N +L+DKN +K+ DFG+A+ + + T +
Sbjct: 128 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFV 185
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
APE ++ G+ D+WS G + + G G T+ E L I + E+Y+
Sbjct: 186 APE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYF 242
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 130 IDKVGQGTYSNVYKA--LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+ ++G G + V+ L++D VA+K ++ S + E ++ KL HP +V
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDK---VAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 188 KLEGLATSRMQYSLYLVFEFMQ----TDLARI---ISNPEGKLTEPQQLLSGLQHCHDRG 240
+L G+ Q + LV EFM+ +D R + E L + G+ + +
Sbjct: 67 QLYGVCLE--QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 241 ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYG 300
++HRD+ N L+ +N V+K++DFG+ + ++ T + + +PE + + Y
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYS 183
Query: 301 VGIDLWSAGCLLAEMF 316
D+WS G L+ E+F
Sbjct: 184 SKSDVWSFGVLMWEVF 199
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 45/265 (16%)
Query: 133 VGQGTYSNVYKA----LDRD-TGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V +A +D+ T + VA+K +K + M+ +++ H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 188 KLEGLATSRMQYSLYLVFEFMQ--------------------TDLARIISNPEGKLTEPQ 227
L G A ++ L ++ EF + DL + E +
Sbjct: 97 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYF--SPNKKRPLTSRVVTL 285
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA P+ R +R+
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPSED 344
W APE + Y + D+WS G LL E+F LG PG E+
Sbjct: 216 WM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDEE 259
Query: 345 YWKKLRLSTTFRPPQSYKPRLFEAF 369
+ ++L+ T R P P +++
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTM 284
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 29/202 (14%)
Query: 133 VGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + +V++ + + VA+K K TS+ KF+ +E + +++ DHP+IVKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 456
Query: 190 EGLATSRMQYSLYLVFE---------FMQT-----DLARIISNPEGKLTEPQQLLSGLQH 235
G+ T + ++++ E F+Q DLA +I QL + L +
Sbjct: 457 IGVIT---ENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-------LYAYQLSTALAY 506
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +HRD+ N+L+ +K+ DFGL+ Y + + + + + APE +
Sbjct: 507 LESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SIN 565
Query: 296 ATDYGVGIDLWSAGCLLAEMFL 317
+ D+W G + E+ +
Sbjct: 566 FRRFTSASDVWMFGVCMWEILM 587
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 16/214 (7%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++ V + + T ++ A+K +K D + V+ E +L P +
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHR 244
M LY V E++ DL I G+ EP ++ GL +GI++R
Sbjct: 409 SCFQTMD-RLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 466
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV--TLWYRAPELLLGATDYGVG 302
D+K N+++D G +KIADFG+ N +T++ T Y APE ++ YG
Sbjct: 467 DLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPE-IIAYQPYGKS 522
Query: 303 IDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFK 336
+D W+ G LL EM G+ G E E I +
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 14/222 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
E ++ I +G+G + V ++T +I A+K + K++ + E +L D
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-MQTDLARIISNPEGKLTEPQ------QLLSGLQHC 236
I L + + LYLV ++ + DL ++S E KL E +++ +
Sbjct: 150 QWITALH--YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 207
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +HRD+K N+L+D NG +++ADFG + + + V T Y +PE+L
Sbjct: 208 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 297 TD----YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
D YG D WS G + EM G + VE +I
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 309
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 14/222 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
E ++ I +G+G + V ++T +I A+K + K++ + E +L D
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-MQTDLARIISNPEGKLTEPQ------QLLSGLQHC 236
I L + + LYLV ++ + DL ++S E KL E +++ +
Sbjct: 134 QWITALH--YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 191
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H +HRD+K N+L+D NG +++ADFG + + + V T Y +PE+L
Sbjct: 192 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 297 TD----YGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
D YG D WS G + EM G + VE +I
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 29/202 (14%)
Query: 133 VGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + +V++ + + VA+K K TS+ KF+ +E + +++ DHP+IVKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 76
Query: 190 EGLATSRMQYSLYLVFE---------FMQT-----DLARIISNPEGKLTEPQQLLSGLQH 235
G+ T + ++++ E F+Q DLA +I QL + L +
Sbjct: 77 IGVIT---ENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-------LYAYQLSTALAY 126
Query: 236 CHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLG 295
+ +HRD+ N+L+ +K+ DFGL+ Y + + + + + APE +
Sbjct: 127 LESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SIN 185
Query: 296 ATDYGVGIDLWSAGCLLAEMFL 317
+ D+W G + E+ +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILM 207
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 23/243 (9%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMI 177
K + YD +++G G ++ V K ++ TG A K +K S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 178 LQKLDHPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQL 229
L+++ HPNI+ L + +R L L +F+F LA+ S E + T +Q+
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDF----LAQKESLSEEEATSFIKQI 124
Query: 230 LSGLQHCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTL 285
L G+ + H + I H D+K N +L+DKN +K+ DFGLA+ + + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTP 182
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
+ APE ++ G+ D+WS G + + G G T+ E L I + E++
Sbjct: 183 EFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF 241
Query: 346 WKK 348
+ +
Sbjct: 242 FSQ 244
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 18/227 (7%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
A+ + I ++G+G Y V K +G+I A+K+++ + + + + + +D
Sbjct: 33 ADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDC 92
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGK-LTEPQQLLS--------GLQ 234
P V G A R + +++ E T L + K T P+ +L L+
Sbjct: 93 PFTVTFYG-ALFR-EGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 150
Query: 235 HCHDR-GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
H H + ++HRDVK SN+LI+ G +K DFG++ Y + + + + Y APE +
Sbjct: 151 HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP--YXAPERI 208
Query: 294 ---LGATDYGVGIDLWSAGCLLAEMFLGR-PIMPGRTEVEQLHRIFK 336
L Y V D+WS G E+ + R P T +QL ++ +
Sbjct: 209 NPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 29/148 (19%)
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSRVVTL 285
Q+ G++ R +HRD+ N+L+ +N V+KI DFGLA Y +P+ R +R+
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK 266
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSP---- 341
W APE + Y D+WS G LL E IF L GSP
Sbjct: 267 WM-APESIFDKI-YSTKSDVWSYGVLLWE-------------------IFSLGGSPYPGV 305
Query: 342 --SEDYWKKLRLSTTFRPPQSYKPRLFE 367
ED+ +LR R P+ P +++
Sbjct: 306 QMDEDFCSRLREGMRMRAPEYSTPEIYQ 333
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+S+ ++ ++G G+Y V+K ++ G++ A+K+ P E+ +K+ H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCH 237
P V+LE LYL E L + L E Q L L H H
Sbjct: 117 PCCVRLE--QAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 238 DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
+G++H DVK +N+ + G K+ DFGL + Y APELL G+
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR--YMAPELLQGS- 231
Query: 298 DYGVGIDLWSAGCLLAEM 315
YG D++S G + E+
Sbjct: 232 -YGTAADVFSLGLTILEV 248
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTS-EPHSVKFMAREIMILQKLDHPNIVKLEG 191
+G+G++ V + + T ++ A+K +K D + V+ E +L P +
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 192 LATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHR 244
M LY V E++ DL I G+ EP ++ GL +GI++R
Sbjct: 88 SCFQTMD-RLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 145
Query: 245 DVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV--TLWYRAPELLLGATDYGVG 302
D+K N+++D G +KIADFG+ N +T++ T Y APE ++ YG
Sbjct: 146 DLKLDNVMLDSEGHIKIADFGMC---KENIWDGVTTKXFCGTPDYIAPE-IIAYQPYGKS 201
Query: 303 IDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
+D W+ G LL EM G+ G E E I
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 233
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWY 287
Q++SGL+H H R I++RD+K N+L+D +G ++I+D GLA + + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGF 355
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTE 327
APELLLG +Y +D ++ G L EM R R E
Sbjct: 356 MAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWY 287
Q++SGL+H H R I++RD+K N+L+D +G ++I+D GLA + + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGF 355
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTE 327
APELLLG +Y +D ++ G L EM R R E
Sbjct: 356 MAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWY 287
Q++SGL+H H R I++RD+K N+L+D +G ++I+D GLA + + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGF 355
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTE 327
APELLLG +Y +D ++ G L EM R R E
Sbjct: 356 MAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 24/240 (10%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-D 182
+ Y+ + +G G+YS + + + T A+K + +P EI IL +
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP------TEEIEILLRYGQ 74
Query: 183 HPNIVKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQQLL----SGLQHC 236
HPNI+ L+ + +Y +Y+V E M+ L +I+ E +L +++
Sbjct: 75 HPNIITLKDVYDDG-KY-VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYL 132
Query: 237 HDRGILHRDVKGSNLL-IDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
H +G++HRD+K SN+L +D++G ++I DFG A +T T + APE
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP-CYTANFVAPE- 190
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLG-RPIM--PGRTEVEQLHRIFKLCGSPSEDYWKKL 349
+L Y D+WS G LL M G P P T E L RI S S YW +
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWY 287
Q++SGL+H H R I++RD+K N+L+D +G ++I+D GLA + + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGF 355
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTE 327
APELLLG +Y +D ++ G L EM R R E
Sbjct: 356 MAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 130 IDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMA-REIMILQKLD----HP 184
+ K G GT ++ DR I + + + P S E+ +L K+ HP
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ------QLLSGLQHCHD 238
+++L ++ + L L DL I+ +G L E Q+++ +QHCH
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVAAIQHCHS 157
Query: 239 RGILHRDVKGSNLLID-KNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGAT 297
RG++HRD+K N+LID + G K+ DFG P T T Y PE +
Sbjct: 158 RGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSPPEWISRHQ 214
Query: 298 DYGVGIDLWSAGCLLAEMFLG 318
+ + +WS G LL +M G
Sbjct: 215 YHALPATVWSLGILLYDMVCG 235
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 18/217 (8%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKA--LDRDTGKIVALKKVKFDTSEPHSVKFM 171
EV L+P +G+G + VY +D+ +I K +E V+
Sbjct: 10 EVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAF 69
Query: 172 AREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQ---- 227
RE ++++ L+HPN++ L G+ L+ DL + I +P+ T
Sbjct: 70 LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF 129
Query: 228 --QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLT 279
Q+ G+++ ++ +HRD+ N ++D++ +K+ADFGLA Y+S + R
Sbjct: 130 GLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHR--H 187
Query: 280 SRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
+R+ W L + D+WS G LL E+
Sbjct: 188 ARLPVKWTALES--LQTYRFTTKSDVWSFGVLLWELL 222
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 74
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQ--TDLARIISNPEGKLTEP------QQLLSGLQHCH 237
+++L L S L+ E M+ DL I+ G L E Q+L ++HCH
Sbjct: 75 VIRL--LDWFERPDSFVLILERMEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCH 131
Query: 238 DRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
+ G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 188
Query: 297 TDYGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCG 210
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 127
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 185
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 186 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 240
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 24/214 (11%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMIL-QKLDHPNIVKLEG 191
+G+G Y+ V A+ GK A+K + + HS + RE+ L Q + NI++L
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKII--EKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 192 LATSRMQYSLYLVFEFMQ--TDLARIISNPEGKLTEPQQLL----SGLQHCHDRGILHRD 245
++ YLVFE +Q + LA I E +++ + L H +GI HRD
Sbjct: 79 FFEDDTRF--YLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRD 136
Query: 246 VKGSNLLI---DKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
+K N+L +K +KI DF L N +P LT+ + Y APE++
Sbjct: 137 LKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVF 196
Query: 297 TD----YGVGIDLWSAGCLLAEMFLGRPIMPGRT 326
TD Y DLWS G +L M G P G
Sbjct: 197 TDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHC 230
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 127
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 185
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 186 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 240
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPAFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 129 KIDKVGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
K+ +G G + V+K + + ++ KI KV D S S + + ++ + LDH +
Sbjct: 35 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 94
Query: 186 IVKLEGLATSRMQYSLYLVFEFM-------QTDLARIISNPEGKLTEPQQLLSGLQHCHD 238
IV+L GL SL LV +++ R P+ L Q+ G+ + +
Sbjct: 95 IVRLLGLCPGS---SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVT--LWYRAPELLLGA 296
G++HR++ N+L+ +++ADFG+A+ P+ K+ L S T W + G
Sbjct: 152 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG- 210
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 211 -KYTHQSDVWSYGVTVWELM 229
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSNL-LIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N+ L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 129 KIDKVGQGTYSNVYKAL---DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPN 185
K+ +G G + V+K + + ++ KI KV D S S + + ++ + LDH +
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 186 IVKLEGLATSRMQYSLYLVFEFM-------QTDLARIISNPEGKLTEPQQLLSGLQHCHD 238
IV+L GL SL LV +++ R P+ L Q+ G+ + +
Sbjct: 77 IVRLLGLCPGS---SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVT--LWYRAPELLLGA 296
G++HR++ N+L+ +++ADFG+A+ P+ K+ L S T W + G
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG- 192
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 193 -KYTHQSDVWSYGVTVWELM 211
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L L +F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSNL-LIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N+ L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 174 EIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLAR------IISNPEGKLTEPQ 227
E+ I+ + + + EG+ T+ + +Y+++E+M+ D + + P
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDE--VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 228 QL--------LSGLQHCH-DRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL 278
Q+ L+ + H ++ I HRDVK SN+L+DKNG +K++DFG + Y K +
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG- 209
Query: 279 TSRVVTLWYRAPELLLGATDY-GVGIDLWSAGCLLAEMF 316
SR T + PE + Y G +D+WS G L MF
Sbjct: 210 -SR-GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 138/355 (38%), Gaps = 73/355 (20%)
Query: 114 EVLAGLVPKSAESYDKIDKVGQGTYSNVYKA---LDRDTGKIVALKKVKFDTSEPHSVKF 170
E L VP+ + + DK+G+GT+S+VY A L + +ALK + TS P +
Sbjct: 10 EKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHL-IPTSHPIRIAA 68
Query: 171 MAREIMILQKLDHPNIVKLEGLATSRMQYSL-YLVFEFMQTDLARIISNPEGKLTEPQQL 229
+ + + D+ VK + ++ YL E D+ +S E + L
Sbjct: 69 ELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESF-LDILNSLSFQEVR-EYMLNL 126
Query: 230 LSGLQHCHDRGILHRDVKGSNLLIDKNGVLK---IADFGLAN------------------ 268
L+ H GI+HRDVK SN L ++ LK + DFGLA
Sbjct: 127 FKALKRIHQFGIVHRDVKPSNFLYNRR--LKKYALVDFGLAQGTHDTKIELLKFVQSEAQ 184
Query: 269 ---------YFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGR 319
++++ + R T +RAPE+L + ID+WSAG + + GR
Sbjct: 185 QERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
Query: 320 -PIMPGRTEVEQLHRIFKLCGS--------------------PSEDYWKKLRLSTTFRPP 358
P ++ L +I + GS P++D K L R
Sbjct: 245 YPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRK---LCERLRGM 301
Query: 359 QSYKPRL----------FEAFSEFPEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
S P+L E ++E P+ +PA R +A AL + FF
Sbjct: 302 DSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 28/209 (13%)
Query: 132 KVGQGTYSNVYKA----LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
++G+G + V+ A L + KI+ K D S+ ++ K RE +L L H +IV
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD-NARKDFHREAELLTNLQHEHIV 78
Query: 188 KLEGLATSRMQYSLYLVFEFMQT-DLARII------------SNPEGKLTE------PQQ 228
K G+ L +VFE+M+ DL + + NP +LT+ QQ
Sbjct: 79 KFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 229 LLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA-NYFSPNKKRPLTSRVVTLWY 287
+ +G+ + + +HRD+ N L+ +N ++KI DFG++ + +S + R ++ + +
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMF 316
PE ++ + D+WS G +L E+F
Sbjct: 197 MPPESIM-YRKFTTESDVWSLGVVLWEIF 224
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 28/204 (13%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 31 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 189 LEGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGK------LTEPQQLLSGLQHCHDRGI 241
G +T+ L +V ++ + + L + E K + +Q G+ + H + I
Sbjct: 85 FMGYSTAP---QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL--LLG 295
+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+ +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWM-APEVIRMQD 198
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 130 IDKVGQGTYSNVYKA-LDRDTGKIV--ALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++K+G G++ V + D +GK V A+K +K D S+P ++ RE+ + LDH N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 186 IVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPE-----------GKLTE-PQQLLSG 232
+++L G+ T M+ M T+LA + S + G L+ Q+ G
Sbjct: 83 LIRLYGVVLTPPMK---------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS--RVVTLWYRAP 290
+ + + +HRD+ NLL+ ++KI DFGL N + R V + AP
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
E L T + D W G L EMF G+ G + LH+I K
Sbjct: 194 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 23/243 (9%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMI 177
K + YD +++G G ++ V K ++ TG A K +K S S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 178 LQKLDHPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQL 229
L+++ H N++ L + +R L L +F+F LA+ S E + T +Q+
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDF----LAQKESLSEEEATSFIKQI 124
Query: 230 LSGLQHCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTL 285
L G+ + H + I H D+K N +L+DKN +K+ DFGLA+ + + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTP 182
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
+ APE ++ G+ D+WS G + + G G T+ E L I + E++
Sbjct: 183 EFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF 241
Query: 346 WKK 348
+ +
Sbjct: 242 FSQ 244
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 28/204 (13%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 31 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 189 LEGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGK------LTEPQQLLSGLQHCHDRGI 241
G +T + L +V ++ + + L + E K + +Q G+ + H + I
Sbjct: 85 FMGYST---KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL--LLG 295
+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+ +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWM-APEVIRMQD 198
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 28/204 (13%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 19 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 72
Query: 189 LEGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGK------LTEPQQLLSGLQHCHDRGI 241
G +T + L +V ++ + + L + E K + +Q G+ + H + I
Sbjct: 73 FMGYST---KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL--LLG 295
+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+ +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIRMQD 186
Query: 296 ATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 23/241 (9%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMI 177
K + YD +++G G ++ V K ++ TG A K +K S S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 178 LQKLDHPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQL 229
L+++ H N++ L + +R L L +F+F LA+ S E + T +Q+
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDF----LAQKESLSEEEATSFIKQI 124
Query: 230 LSGLQHCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTL 285
L G+ + H + I H D+K N +L+DKN +K+ DFGLA+ + + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTP 182
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
+ APE ++ G+ D+WS G + + G G T+ E L I + E++
Sbjct: 183 EFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 346 W 346
+
Sbjct: 242 F 242
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSRVVTL 285
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA Y P+ R +R+
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 267
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPSED 344
W APE + Y + D+WS G LL E+F LG PG E+
Sbjct: 268 WM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDEE 311
Query: 345 YWKKLRLSTTFRPPQSYKPRLFEAF 369
+ ++L+ T R P P +++
Sbjct: 312 FCRRLKEGTRMRAPDYTTPEMYQTM 336
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKKRPLTSRVVTL 285
Q+ G++ R +HRD+ N+L+ + V+KI DFGLA Y P+ R +R+
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 265
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFKLCGSPSED 344
W APE + Y + D+WS G LL E+F LG PG E+
Sbjct: 266 WM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDEE 309
Query: 345 YWKKLRLSTTFRPPQSYKPRLFEAF 369
+ ++L+ T R P P +++
Sbjct: 310 FCRRLKEGTRMRAPDYTTPEMYQTM 334
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 211 DLARIISNPEGKLTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN-- 268
DL + E + Q+ G++ R +HRD+ N+L+ + V+KI DFGLA
Sbjct: 182 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 241
Query: 269 YFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTE 327
Y P+ R +R+ W APE + Y + D+WS G LL E+F LG PG
Sbjct: 242 YKDPDYVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV-- 297
Query: 328 VEQLHRIFKLCGSPSEDYWKKLRLSTTFRPPQSYKPRLFEA 368
E++ ++L+ T R P P +++
Sbjct: 298 ------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQT 326
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 130 IDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+ +G+G + +V L G VA+K +K D + + F+A E ++ +L H N+V+L
Sbjct: 17 LQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDAT---AQAFLA-EASVMTQLRHSNLVQL 70
Query: 190 EGLATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGI 241
G+ + LY+V E+M R + + L + +++
Sbjct: 71 LGVIVEE-KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 129
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
+HRD+ N+L+ ++ V K++DFGL S + T ++ W APE L A +
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKW-TAPEALREAA-FST 184
Query: 302 GIDLWSAGCLLAEMF-LGR---PIMPGRTEVEQLHRIFKL 337
D+WS G LL E++ GR P +P + V ++ + +K+
Sbjct: 185 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 224
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 23/241 (9%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMI 177
K + YD +++G G ++ V K ++ TG A K +K S S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 178 LQKLDHPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQL 229
L+++ H N++ L + +R L L +F+F LA+ S E + T +Q+
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDF----LAQKESLSEEEATSFIKQI 124
Query: 230 LSGLQHCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTL 285
L G+ + H + I H D+K N +L+DKN +K+ DFGLA+ + + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTP 182
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
+ APE ++ G+ D+WS G + + G G T+ E L I + E++
Sbjct: 183 EFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 346 W 346
+
Sbjct: 242 F 242
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 23/243 (9%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMI 177
K + YD +++G G ++ V K ++ TG A K +K S S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 178 LQKLDHPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQL 229
L+++ H N++ L + +R L L +F+F LA+ S E + T +Q+
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDF----LAQKESLSEEEATSFIKQI 124
Query: 230 LSGLQHCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTL 285
L G+ + H + I H D+K N +L+DKN +K+ DFGLA+ + + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTP 182
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
+ APE ++ G+ D+WS G + + G G T+ E L I + E++
Sbjct: 183 EFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF 241
Query: 346 WKK 348
+ +
Sbjct: 242 FSQ 244
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 130 IDKVGQGTYSNVYKA-LDRDTGKIV--ALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++K+G G++ V + D +GK V A+K +K D S+P ++ RE+ + LDH N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 186 IVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPE-----------GKLTE-PQQLLSG 232
+++L G+ T M+ M T+LA + S + G L+ Q+ G
Sbjct: 77 LIRLYGVVLTPPMK---------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS--RVVTLWYRAP 290
+ + + +HRD+ NLL+ ++KI DFGL N + R V + AP
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
E L T + D W G L EMF G+ G + LH+I K
Sbjct: 188 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 130 IDKVGQGTYSNVYKA-LDRDTGKIV--ALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++K+G G++ V + D +GK V A+K +K D S+P ++ RE+ + LDH N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 186 IVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPE-----------GKLTE-PQQLLSG 232
+++L G+ T M+ M T+LA + S + G L+ Q+ G
Sbjct: 83 LIRLYGVVLTPPMK---------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS--RVVTLWYRAP 290
+ + + +HRD+ NLL+ ++KI DFGL N + R V + AP
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
E L T + D W G L EMF G+ G + LH+I K
Sbjct: 194 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 211 DLARIISNPEGKLTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN-- 268
DL + E + Q+ G++ R +HRD+ N+L+ + V+KI DFGLA
Sbjct: 184 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243
Query: 269 YFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTE 327
Y P+ R +R+ W APE + Y + D+WS G LL E+F LG PG
Sbjct: 244 YKDPDYVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGV-- 299
Query: 328 VEQLHRIFKLCGSPSEDYWKKLRLSTTFRPPQSYKPRLFEAF 369
E++ ++L+ T R P P +++
Sbjct: 300 ------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 329
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 23/241 (9%)
Query: 122 KSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMI 177
K + YD +++G G ++ V K ++ TG A K +K S S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 178 LQKLDHPNIVKLEGLATSRMQYSLYL-------VFEFMQTDLARIISNPEGKLTE-PQQL 229
L+++ H N++ L + +R L L +F+F LA+ S E + T +Q+
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDF----LAQKESLSEEEATSFIKQI 124
Query: 230 LSGLQHCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTL 285
L G+ + H + I H D+K N +L+DKN +K+ DFGLA+ + + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTP 182
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDY 345
+ APE ++ G+ D+WS G + + G G T+ E L I + E++
Sbjct: 183 EFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 346 W 346
+
Sbjct: 242 F 242
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 130 IDKVGQGTYSNVYKA-LDRDTGKIV--ALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++K+G G++ V + D +GK V A+K +K D S+P ++ RE+ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 186 IVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPE-----------GKLTE-PQQLLSG 232
+++L G+ T M+ M T+LA + S + G L+ Q+ G
Sbjct: 73 LIRLYGVVLTPPMK---------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS--RVVTLWYRAP 290
+ + + +HRD+ NLL+ ++KI DFGL N + R V + AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
E L T + D W G L EMF G+ G + LH+I K
Sbjct: 184 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 14/222 (6%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
E ++ + +G+G + V ++ K+ A+K + K++ + E +L D
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-MQTDLARIISNPEGKLTEPQ------QLLSGLQHC 236
I L + +LYLV ++ + DL ++S E +L E +++ +
Sbjct: 134 KWITTLH--YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 191
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLL-- 294
H +HRD+K N+L+D NG +++ADFG + + V T Y +PE+L
Sbjct: 192 HQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 295 --GATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRI 334
G YG D WS G + EM G + VE +I
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 34/207 (16%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 43 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 189 LEGLATS-----RMQY----SLYLVFEFMQTDLARIISNPEGKLTE-PQQLLSGLQHCHD 238
G +T Q+ SLY ++T I KL + +Q G+ + H
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI------KLIDIARQTAQGMDYLHA 150
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL-- 292
+ I+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWM-APEVIR 207
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 96/230 (41%), Gaps = 28/230 (12%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKF----DTSEPHSVKFMAREIMILQKL-DHPNIV 187
+G G + V +A GK A+ KV T+ + + E+ I+ L H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 188 KLEGLATS------RMQYSLY---LVF-----EFMQTDLARIISNPEGK----LTEPQQL 229
L G T +Y Y L F ++TD A I+N L Q+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 230 LSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL--TSRVVTLWY 287
G+ + +HRDV N+L+ V KI DFGLA + + +R+ W
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW- 232
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
APE + Y V D+WS G LL E+F LG PG + +++ K
Sbjct: 233 MAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 34/207 (16%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 35 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 189 LEGLATS-----RMQY----SLYLVFEFMQTDLARIISNPEGKLTE-PQQLLSGLQHCHD 238
G +T Q+ SLY ++T I KL + +Q G+ + H
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI------KLIDIARQTAQGMDYLHA 142
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL-- 292
+ I+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWM-APEVIR 199
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 90
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 149
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 207 HGRSAAVWSLGILLYDMVCG 226
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 34/207 (16%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 43 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 189 LEGLATS-----RMQY----SLYLVFEFMQTDLARIISNPEGKLTE-PQQLLSGLQHCHD 238
G +T Q+ SLY ++T I KL + +Q G+ + H
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI------KLIDIARQTAQGMDYLHA 150
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL-- 292
+ I+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIR 207
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 75
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 134
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 192 HGRSAAVWSLGILLYDMVCG 211
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 90
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 149
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 207 HGRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 89
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 148
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 205
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 206 HGRSAAVWSLGILLYDMVCG 225
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 90
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 149
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 207 HGRSAAVWSLGILLYDMVCG 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 109
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 168
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 225
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 226 HGRSAAVWSLGILLYDMVCG 245
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 89
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 148
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 205
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 206 HGRSAAVWSLGILLYDMVCG 225
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 130 IDKVGQGTYSNVYKA-LDRDTGKIV--ALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++K+G G++ V + D +GK V A+K +K D S+P ++ RE+ + LDH N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 186 IVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPE-----------GKLTE-PQQLLSG 232
+++L G+ T M+ M T+LA + S + G L+ Q+ G
Sbjct: 77 LIRLYGVVLTPPMK---------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS--RVVTLWYRAP 290
+ + + +HRD+ NLL+ ++KI DFGL N + R V + AP
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
E L T + D W G L EMF G+ G + LH+I K
Sbjct: 188 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 34/207 (16%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 42 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 95
Query: 189 LEGLATS-----RMQY----SLYLVFEFMQTDLARIISNPEGKLTE-PQQLLSGLQHCHD 238
G +T Q+ SLY ++T I KL + +Q G+ + H
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI------KLIDIARQTAQGMDYLHA 149
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL-- 292
+ I+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIR 206
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH-------PN 185
+G G V + R TG+ ALK + +D+ + AR Q++DH P+
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLL-YDSPK-------AR-----QEVDHHWQASGGPH 64
Query: 186 IVKLEGLATSRM--QYSLYLVFEFMQTD--LARIISNPEGKLTEPQ------QLLSGLQH 235
IV + + + + L ++ E M+ +RI + TE + + + +Q
Sbjct: 65 IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF 124
Query: 236 CHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
H I HRDVK NLL +K+ VLK+ DFG A + N L + T +Y APE
Sbjct: 125 LHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA---LQTPCYTPYYVAPE- 180
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+LG Y D+WS G ++ + G P
Sbjct: 181 VLGPEKYDKSCDMWSLGVIMYILLCGFP 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 34/207 (16%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 15 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 189 LEGLATS-----RMQY----SLYLVFEFMQTDLARIISNPEGKLTE-PQQLLSGLQHCHD 238
G +T+ Q+ SLY ++T I KL + +Q G+ + H
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMI------KLIDIARQTAQGMDYLHA 122
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL-- 292
+ I+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIR 179
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 24/220 (10%)
Query: 130 IDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+ +G+G + +V L G VA+K +K D + + F+A E ++ +L H N+V+L
Sbjct: 198 LQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDAT---AQAFLA-EASVMTQLRHSNLVQL 251
Query: 190 EGLATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGI 241
G+ + LY+V E+M R + + L + +++
Sbjct: 252 LGVIVEE-KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 310
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
+HRD+ N+L+ ++ V K++DFGL S + T ++ W APE L +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKW-TAPE-ALREKKFST 365
Query: 302 GIDLWSAGCLLAEMF-LGR---PIMPGRTEVEQLHRIFKL 337
D+WS G LL E++ GR P +P + V ++ + +K+
Sbjct: 366 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 405
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 130 IDKVGQGTYSNVYKA-LDRDTGKIV--ALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++K+G G++ V + D +GK V A+K +K D S+P ++ RE+ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 186 IVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPE-----------GKLTE-PQQLLSG 232
+++L G+ T M+ M T+LA + S + G L+ Q+ G
Sbjct: 73 LIRLYGVVLTPPMK---------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS--RVVTLWYRAP 290
+ + + +HRD+ NLL+ ++KI DFGL N + R V + AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
E L T + D W G L EMF G+ G + LH+I K
Sbjct: 184 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 117
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 176
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 233
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 234 HGRSAAVWSLGILLYDMVCG 253
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLE 190
+ VG+G + V KA R K VA+K+++ ++ K E+ L +++HPNIVKL
Sbjct: 15 EVVGRGAFGVVCKAKWR--AKDVAIKQIESESER----KAFIVELRQLSRVNHPNIVKLY 68
Query: 191 GLATS----RMQY----SLYLVFEFMQTDLARIISNPEGKLTEPQQLLSGLQHCHDRGIL 242
G + M+Y SLY V + ++ + Q ++ L + ++
Sbjct: 69 GACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 243 HRDVKGSNLLIDKNG-VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
HRD+K NLL+ G VLKI DFG A + + +T+ + + APE+ G ++Y
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVFEG-SNYSE 183
Query: 302 GIDLWSAGCLLAEMFLGR 319
D++S G +L E+ R
Sbjct: 184 KCDVFSWGIILWEVITRR 201
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 97/231 (41%), Gaps = 45/231 (19%)
Query: 133 VGQGTYSNVYKALDRDTGKI-----VALK--KVKFDTSEPHSVKFMAREIMILQKLDHPN 185
+G G + V A K VA+K K K D+SE ++ M+ M+ Q H N
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREAL--MSELKMMTQLGSHEN 110
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ----------------- 227
IV L G T + +YL+FE+ DL + + K +E +
Sbjct: 111 IVNLLGACT--LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 228 -----------QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR 276
Q+ G++ + +HRD+ N+L+ V+KI DFGLA +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 277 PL--TSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPG 324
+ +R+ W APE L Y + D+WS G LL E+F LG PG
Sbjct: 229 VVRGNARLPVKW-MAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH-------PN 185
+G G V + R TG+ ALK + +D+ + AR Q++DH P+
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLL-YDSPK-------AR-----QEVDHHWQASGGPH 83
Query: 186 IVKLEGLATSRM--QYSLYLVFEFMQTD--LARIISNPEGKLTEPQ------QLLSGLQH 235
IV + + + + L ++ E M+ +RI + TE + + + +Q
Sbjct: 84 IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF 143
Query: 236 CHDRGILHRDVKGSNLLI---DKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPEL 292
H I HRDVK NLL +K+ VLK+ DFG A + N L + T +Y APE
Sbjct: 144 LHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA---LQTPCYTPYYVAPE- 199
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGRP 320
+LG Y D+WS G ++ + G P
Sbjct: 200 VLGPEKYDKSCDMWSLGVIMYILLCGFP 227
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLE 190
+ VG+G + V KA R K VA+K+++ ++ K E+ L +++HPNIVKL
Sbjct: 14 EVVGRGAFGVVCKAKWR--AKDVAIKQIESESER----KAFIVELRQLSRVNHPNIVKLY 67
Query: 191 GLATS----RMQY----SLYLVFEFMQTDLARIISNPEGKLTEPQQLLSGLQHCHDRGIL 242
G + M+Y SLY V + ++ + Q ++ L + ++
Sbjct: 68 GACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 243 HRDVKGSNLLIDKNG-VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
HRD+K NLL+ G VLKI DFG A + + +T+ + + APE+ G ++Y
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVFEG-SNYSE 182
Query: 302 GIDLWSAGCLLAEMFLGR 319
D++S G +L E+ R
Sbjct: 183 KCDVFSWGIILWEVITRR 200
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 122
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 181
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 238
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 239 HGRSAAVWSLGILLYDMVCG 258
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 75
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 134
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 192 HGRSAAVWSLGILLYDMVCG 211
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 161
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 219 HGRSAAVWSLGILLYDMVCG 238
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 74
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 133
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 190
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 191 HGRSAAVWSLGILLYDMVCG 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 34/207 (16%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 20 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 189 LEGLATS-----RMQY----SLYLVFEFMQTDLARIISNPEGKLTE-PQQLLSGLQHCHD 238
G +T Q+ SLY ++T I KL + +Q G+ + H
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI------KLIDIARQTAQGMDYLHA 127
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL-- 292
+ I+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIR 184
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 75
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 134
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 192 HGRSAAVWSLGILLYDMVCG 211
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 130 IDKVGQGTYSNVYKA-LDRDTGKIV--ALKKVKFDT-SEPHSVKFMAREIMILQKLDHPN 185
++K+G G++ V + D +GK V A+K +K D S+P ++ RE+ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 186 IVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPE-----------GKLTE-PQQLLSG 232
+++L G+ T M+ M T+LA + S + G L+ Q+ G
Sbjct: 73 LIRLYGVVLTPPMK---------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 233 LQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS--RVVTLWYRAP 290
+ + + +HRD+ NLL+ ++KI DFGL N + R V + AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
E L T + D W G L EMF G+ G + LH+I K
Sbjct: 184 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPH----SVKFMAREIMILQKLD 182
YD +++G G ++ V K ++ TG A K +K ++ S + + RE+ IL+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 183 HPNIVKLEGLATSRMQYSLY--LV-----FEFMQTDLARIISNPEGKLTE-PQQLLSGLQ 234
HPN++ L + ++ L LV F+F LA S E + TE +Q+L+G+
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDF----LAEKESLTEEEATEFLKQILNGVY 128
Query: 235 HCHDRGILHRDVKGSN-LLIDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAP 290
+ H I H D+K N +L+D+N +KI DFGLA+ + + T + AP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAP 186
Query: 291 ELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIFKLCGSPSEDYW 346
E++ G+ D+WS G + + G G T+ E L + + ++Y+
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 34/207 (16%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 20 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 189 LEGLATS-----RMQY----SLYLVFEFMQTDLARIISNPEGKLTE-PQQLLSGLQHCHD 238
G +T Q+ SLY ++T I KL + +Q G+ + H
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI------KLIDIARQTAQGMDYLHA 127
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL-- 292
+ I+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIR 184
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 34/207 (16%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 15 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 189 LEGLATS-----RMQY----SLYLVFEFMQTDLARIISNPEGKLTE-PQQLLSGLQHCHD 238
G +T Q+ SLY ++T I KL + +Q G+ + H
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI------KLIDIARQTAQGMDYLHA 122
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL-- 292
+ I+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWM-APEVIR 179
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 97
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 156
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 213
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 214 HGRSAAVWSLGILLYDMVCG 233
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 48/214 (22%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 17 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 70
Query: 189 LEGLAT-------------SRMQYSLYLV---FEFMQ-TDLARIISNPEGKLTEPQQLLS 231
G +T S + + L+++ FE ++ D+AR Q
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR-------------QTAQ 117
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWY 287
G+ + H + I+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW
Sbjct: 118 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM 175
Query: 288 RAPEL--LLGATDYGVGIDLWSAGCLLAEMFLGR 319
APE+ + Y D+++ G +L E+ G+
Sbjct: 176 -APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 117
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 176
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 233
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 234 HGRSAAVWSLGILLYDMVCG 253
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 161
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 219 HGRSAAVWSLGILLYDMVCG 238
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 79
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q + L+ D R + G L Q+ G+ + D
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 197
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 198 RIYTHQSDVWSYGVTVWELM 217
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 133/337 (39%), Gaps = 80/337 (23%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG-KIVALKKVK------------------FDTSEPHS 167
Y+ +D +G+G + V + +D G + VA+K VK +T++P+S
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 168 VKFMAREIMILQKLDHPN----IVKLEGLAT-SRMQYSLYLVFEFMQTDLARIISNPEGK 222
R + +L+ +H + +L GL+T ++ + +L F + D R ++
Sbjct: 76 T---FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPF---RLDHIRKMA----- 124
Query: 223 LTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDK-------------------NGVLKIAD 263
Q+ + H + H D+K N+L + N +K+ D
Sbjct: 125 ----YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 264 FGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMP 323
FG A Y + +++R YRAPE++L A + D+WS GC+L E +LG + P
Sbjct: 181 FGSATYDDEHHSTLVSTR----HYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFP 235
Query: 324 GRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRPPQ----------SYKPRLFEAFSEF- 372
E L + ++ G + +K R F + Y R + EF
Sbjct: 236 THDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFM 295
Query: 373 ------PEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
E DPA R + ALK+ FF
Sbjct: 296 LSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 161
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 219 HGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 162
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 220 HGRSAAVWSLGILLYDMVCG 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 162
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 220 HGRSAAVWSLGILLYDMVCG 239
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 162
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 220 HGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 161
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 219 HGRSAAVWSLGILLYDMVCG 238
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 162
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 220 HGRSAAVWSLGILLYDMVCG 239
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 70
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNX 129
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 187 HGRSAAVWSLGILLYDMVCG 206
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 77
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q + L+ D R + G L Q+ G+ + D
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 195
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 78
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q + L+ D R + G L Q+ G+ + D
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 196
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 197 RIYTHQSDVWSYGVTVWELM 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 25/197 (12%)
Query: 132 KVGQGTYSNVYKALDRDTGKIVA---LKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G+G++ VYK LD +T VA L+ K SE K E L+ L HPNIV+
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFK---EEAEXLKGLQHPNIVR 89
Query: 189 L--EGLATSRMQYSLYLVFEF-----MQTDLARI-ISNPEGKLTEPQQLLSGLQHCHDRG 240
+T + + + LV E ++T L R + + + +Q+L GLQ H R
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 241 --ILHRDVKGSNLLIDK-NGVLKIADFGLANYFSPNKKRPLTSRVV-TLWYRAPELLLGA 296
I+HRD+K N+ I G +KI D GLA K+ V+ T + APE
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXY--E 203
Query: 297 TDYGVGIDLWSAG-CLL 312
Y +D+++ G C L
Sbjct: 204 EKYDESVDVYAFGXCXL 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 76
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q + L+ D R + G L Q+ G+ + D
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 194
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 195 RIYTHQSDVWSYGVTVWELM 214
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 75
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q + L+ D R + G L Q+ G+ + D
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 193
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 35/168 (20%)
Query: 129 KIDKVGQGTYSNVYKAL---DRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
++ +G G + VYK + + +T KI VA+K + T +V+FM E +I+ +DHP
Sbjct: 42 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFM-DEALIMASMDHP 100
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTE-----------------PQ 227
++V+L G+ S ++ LV + M P G L E
Sbjct: 101 HLVRLLGVCLSP---TIQLVTQLM----------PHGCLLEYVHEHKDNIGSQLLLNWCV 147
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKK 275
Q+ G+ + +R ++HRD+ N+L+ +KI DFGLA ++K
Sbjct: 148 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 34/207 (16%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K + P ++ E+ +L+K H NI+
Sbjct: 15 RIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 189 LEGLATS-----RMQY----SLYLVFEFMQTDLARIISNPEGKLTE-PQQLLSGLQHCHD 238
G +T Q+ SLY ++T I KL + +Q G+ + H
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI------KLIDIARQTAQGMDYLHA 122
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLAN----YFSPNKKRPLTSRVVTLWYRAPEL-- 292
+ I+HRD+K +N+ + ++ +KI DFGLA + ++ L+ + LW APE+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIR 179
Query: 293 LLGATDYGVGIDLWSAGCLLAEMFLGR 319
+ Y D+++ G +L E+ G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 76
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q + L+ D R + G L Q+ G+ + D
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 194
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 195 RIYTHQSDVWSYGVTVWELM 214
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 132 KVGQGTYSNVYKALDRDTGKI---VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVK 188
++G G++ VYK GK VA+K +K P + E+ +L+K H NI+
Sbjct: 43 RIGSGSFGTVYK------GKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILL 96
Query: 189 LEGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGI 241
G T +L +V ++ + + L + + E K Q Q G+ + H + I
Sbjct: 97 FMGYMTKD---NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNI 153
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANY-----FSPNKKRPLTSRVVTLWYRAPELLLGA 296
+HRD+K +N+ + + +KI DFGLA S ++P S LW APE++
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS---VLWM-APEVIRMQ 209
Query: 297 TD--YGVGIDLWSAGCLLAEMFLG 318
+ + D++S G +L E+ G
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 73
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 132
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 189
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 190 HGRSAAVWSLGILLYDMVCG 209
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 70
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 129
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 187 HGRSAAVWSLGILLYDMVCG 206
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSE-----PHSVKFMAREIMILQKLD--HPN 185
+G G + +VY + VA+K V+ D P+ + + E+++L+K+
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 70
Query: 186 IVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP------QQLLSGLQHCHDR 239
+++L + L L DL I+ G L E Q+L ++HCH+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 129
Query: 240 GILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATD 298
G+LHRD+K N+LID N G LK+ DFG K T T Y PE +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 299 YGVGIDLWSAGCLLAEMFLG 318
+G +WS G LL +M G
Sbjct: 187 HGRSAAVWSLGILLYDMVCG 206
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 24/220 (10%)
Query: 130 IDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+ +G+G + +V L G VA+K +K D + + F+A E ++ +L H N+V+L
Sbjct: 26 LQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDAT---AQAFLA-EASVMTQLRHSNLVQL 79
Query: 190 EGLATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGI 241
G+ + LY+V E+M R + + L + +++
Sbjct: 80 LGVIVEE-KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 138
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
+HRD+ N+L+ ++ V K++DFGL S + T ++ W APE L +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKW-TAPE-ALREKKFST 193
Query: 302 GIDLWSAGCLLAEMF-LGR---PIMPGRTEVEQLHRIFKL 337
D+WS G LL E++ GR P +P + V ++ + +K+
Sbjct: 194 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 233
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 35/168 (20%)
Query: 129 KIDKVGQGTYSNVYKAL---DRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
++ +G G + VYK + + +T KI VA+K + T +V+FM E +I+ +DHP
Sbjct: 19 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFM-DEALIMASMDHP 77
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTE-----------------PQ 227
++V+L G+ S ++ LV + M P G L E
Sbjct: 78 HLVRLLGVCLSP---TIQLVTQLM----------PHGCLLEYVHEHKDNIGSQLLLNWCV 124
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKK 275
Q+ G+ + +R ++HRD+ N+L+ +KI DFGLA ++K
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 96/230 (41%), Gaps = 28/230 (12%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKF----DTSEPHSVKFMAREIMILQKL-DHPNIV 187
+G G + V +A GK A+ KV T+ + + E+ I+ L H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 188 KLEGLATS------RMQYSLY---LVF-----EFMQTDLARIISNP----EGKLTEPQQL 229
L G T +Y Y L F ++TD A I+N L Q+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 230 LSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL--TSRVVTLWY 287
G+ + +HRDV N+L+ V KI DFGLA + + +R+ W
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW- 232
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
APE + Y V D+WS G LL E+F LG PG + +++ K
Sbjct: 233 MAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 24/220 (10%)
Query: 130 IDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+ +G+G + +V L G VA+K +K D + + F+A E ++ +L H N+V+L
Sbjct: 11 LQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDAT---AQAFLA-EASVMTQLRHSNLVQL 64
Query: 190 EGLATSRMQYSLYLVFEFMQT--------DLARIISNPEGKLTEPQQLLSGLQHCHDRGI 241
G+ + LY+V E+M R + + L + +++
Sbjct: 65 LGVIVEE-KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 123
Query: 242 LHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGV 301
+HRD+ N+L+ ++ V K++DFGL S + T ++ W APE L +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKW-TAPE-ALREKKFST 178
Query: 302 GIDLWSAGCLLAEMF-LGR---PIMPGRTEVEQLHRIFKL 337
D+WS G LL E++ GR P +P + V ++ + +K+
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 218
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 27/228 (11%)
Query: 130 IDKVGQGTYSNVYKA----LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
I +G G + VY+ + D + VA+K + SE + F+ E +I+ KL+H
Sbjct: 36 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKLNHQ 94
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQQL------------LS 231
NIV+ G++ + +++ E M DL + + ++P L
Sbjct: 95 NIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNG---VLKIADFGLA-NYFSPNKKRPLTSRVVTLWY 287
G Q+ + +HRD+ N L+ G V KI DFG+A + + + R ++ + +
Sbjct: 153 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRI 334
PE + + D WS G LL E+F LG P ++ E L +
Sbjct: 213 MPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Query: 153 VALKKVKFDT-SEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD 211
VA+K +K + SE ++ E ++ L H +V+L G+ T Q ++++ E+M
Sbjct: 51 VAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGVCTK--QRPIFIITEYMANG 104
Query: 212 LARIISNPEGKLTEPQQLLS-------GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADF 264
+ QQLL +++ + LHRD+ N L++ GV+K++DF
Sbjct: 105 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 164
Query: 265 GLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMP 323
GL+ Y +++ + + PE+L+ + + D+W+ G L+ E++ LG+ MP
Sbjct: 165 GLSRYVLDDEETSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYSLGK--MP 221
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 27/228 (11%)
Query: 130 IDKVGQGTYSNVYKA----LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
I +G G + VY+ + D + VA+K + SE + F+ E +I+ KL+H
Sbjct: 50 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKLNHQ 108
Query: 185 NIVKLEGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQQL------------LS 231
NIV+ G++ + +++ E M DL + + ++P L
Sbjct: 109 NIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 232 GLQHCHDRGILHRDVKGSNLLIDKNG---VLKIADFGLA-NYFSPNKKRPLTSRVVTLWY 287
G Q+ + +HRD+ N L+ G V KI DFG+A + + + R ++ + +
Sbjct: 167 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 288 RAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRI 334
PE + + D WS G LL E+F LG P ++ E L +
Sbjct: 227 MPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 117 AGLVPKSAESYDKIDK-------VGQGTYSNVYKAL--DRDTGKI-VALKKVKFDTSEPH 166
+GLVP+ + Y + +G+G + VY+ + + KI VA+K K D + +
Sbjct: 9 SGLVPRGSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN 68
Query: 167 SVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEP 226
KFM+ E +I++ LDHP+IVKL G+ + + ++ + +L + + L
Sbjct: 69 KEKFMS-EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPY--GELGHYLERNKNSLKVL 125
Query: 227 QQLLSGLQHCHDRGIL------HRDVKGSNLLIDKNGVLKIADFGLANYF 270
+L LQ C L HRD+ N+L+ +K+ DFGL+ Y
Sbjct: 126 TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 175
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 24/239 (10%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKL-DH 183
+ Y+ + +G G+YS + + + T A+K + +P EI IL + H
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDP------TEEIEILLRYGQH 75
Query: 184 PNIVKLEGLATSRMQYSLYLVFEFMQTD--LARIISNPEGKLTEPQQLL----SGLQHCH 237
PNI+ L+ + +Y+V E + L +I+ E +L +++ H
Sbjct: 76 PNIITLKDVYDDGKY--VYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 238 DRGILHRDVKGSNLL-IDKNG---VLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELL 293
+G++HRD+K SN+L +D++G ++I DFG A L + T + APE +
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL-LXTPCYTANFVAPE-V 191
Query: 294 LGATDYGVGIDLWSAGCLLAEMFLG-RPIM--PGRTEVEQLHRIFKLCGSPSEDYWKKL 349
L Y D+WS G LL G P P T E L RI S S YW +
Sbjct: 192 LERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 78
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 196
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 197 RIYTHQSDVWSYGVTVWELM 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 82
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 200
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 201 RIYTHQSDVWSYGVTVWELM 220
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 81
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKK--RPLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 142 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 199
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 200 RIYTHQSDVWSYGVTVWELM 219
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 131/337 (38%), Gaps = 80/337 (23%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG-KIVALKKVK------------------FDTSEPHS 167
Y+ +D +G+G + V + +D G + VA+K VK +T++P+S
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 168 VKFMAREIMILQKLDHPN----IVKLEGLAT-SRMQYSLYLVFEFMQTDLARIISNPEGK 222
R + +L+ +H + +L GL+T ++ + +L F + D R ++
Sbjct: 76 T---FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPF---RLDHIRKMA----- 124
Query: 223 LTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDK-------------------NGVLKIAD 263
Q+ + H + H D+K N+L + N +K+ D
Sbjct: 125 ----YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 264 FGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMP 323
FG A Y + + R YRAPE++L A + D+WS GC+L E +LG + P
Sbjct: 181 FGSATYDDEHHSTLVXXR----HYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFP 235
Query: 324 GRTEVEQLHRIFKLCGSPSEDYWKKLRLSTTFRPPQ----------SYKPRLFEAFSEF- 372
E L + ++ G + +K R F + Y R + EF
Sbjct: 236 THDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFM 295
Query: 373 ------PEXXXXXXXXXXXXDPAYRGSAASALKNEFF 403
E DPA R + ALK+ FF
Sbjct: 296 LSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 77
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 195
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT+ T +Y
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYV 190
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D+WS G ++ + G P
Sbjct: 191 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 221
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKF----DTSEPHSVKFMAREIMILQKL-DHPNIV 187
+G G + V +A GK A+ KV T+ + + E+ I+ L H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 188 KLEGLATS------RMQYSLY-LVFEFMQTDLARIISNPEGKLTEPQQLL-------SGL 233
L G T +Y Y + F++ + +G+ E + LL G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL--TSRVVTLWYRAPE 291
+ +HRDV N+L+ V KI DFGLA + + +R+ W APE
Sbjct: 174 AFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW-MAPE 232
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
+ Y V D+WS G LL E+F LG PG + +++ K
Sbjct: 233 SIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 277
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT+ T +Y
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYV 191
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D+WS G ++ + G P
Sbjct: 192 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 78
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 196
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 197 RIYTHQSDVWSYGVTVWELM 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 100
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 101 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 161 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 218
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 219 RIYTHQSDVWSYGVTVWELM 238
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 78
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 196
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 197 RIYTHQSDVWSYGVTVWELM 216
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT+ T +Y
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYV 230
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D+WS G ++ + G P
Sbjct: 231 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 261
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 32/212 (15%)
Query: 132 KVGQGTYSNVYKA-----LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
++G+G + V+ A L +VA+K +K + SE F RE +L L H +I
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQ-REAELLTMLQHQHI 105
Query: 187 VKLEGLATSRMQYSLYLVFEFMQ-TDLARIISN--PEGKLTE------------------ 225
V+ G+ T L +VFE+M+ DL R + + P+ KL
Sbjct: 106 VRFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 226 PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA-NYFSPNKKRPLTSRVVT 284
Q+ +G+ + +HRD+ N L+ + V+KI DFG++ + +S + R ++
Sbjct: 164 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
+ + PE +L + D+WS G +L E+F
Sbjct: 224 IRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 254
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 85
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS--RVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 146 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 203
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 204 RIYTHQSDVWSYGVTVWELM 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT+ T +Y
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYV 192
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D+WS G ++ + G P
Sbjct: 193 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 223
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT+ T +Y
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYV 236
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D+WS G ++ + G P
Sbjct: 237 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 267
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT+ T +Y
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYV 186
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D+WS G ++ + G P
Sbjct: 187 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 217
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 95
Query: 190 EGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G+++ + +
Sbjct: 96 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA Y+S + K +++ W L
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT--GAKLPVKWMALES--LQT 210
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKN-GVLKIADFGLANYFSPNKKRPLTSRVVTLW 286
Q+L ++HCH+ G+LHRD+K N+LID N G LK+ DFG K T T
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 221
Query: 287 YRAPELLLGATDYGVGIDLWSAGCLLAEMFLG 318
Y PE + +G +WS G LL +M G
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT+ T +Y
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYV 186
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D+WS G ++ + G P
Sbjct: 187 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 217
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 190 EGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G+++ + +
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA Y+S + K +++ W L
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT--GAKLPVKWMALES--LQT 211
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 75
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 193
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 190 EGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G+++ + +
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA Y+S + K +++ W L
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT--GAKLPVKWMALES--LQT 211
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT+ T +Y
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYV 185
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D+WS G ++ + G P
Sbjct: 186 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 216
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT+ T +Y
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYV 184
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D+WS G ++ + G P
Sbjct: 185 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 215
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 88
Query: 190 EGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G+++ + +
Sbjct: 89 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 147
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA Y+S + K +++ W L
Sbjct: 148 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT--GAKLPVKWMALES--LQT 203
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYP 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 94
Query: 190 EGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G+++ + +
Sbjct: 95 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 153
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA Y+S + K +++ W L
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT--GAKLPVKWMALES--LQT 209
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 75
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 193
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREI-MILQKLDHPNIVKL 189
D +G+G ++ V ++ T + A+K ++ S F RE+ M+ Q H N+++L
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF--REVEMLYQCQGHRNVLEL 76
Query: 190 EGLATSRMQYSLYLVFEFMQ--TDLARI-----ISNPEGKLTEPQQLLSGLQHCHDRGIL 242
++ YLVFE M+ + L+ I + E + Q + S L H++GI
Sbjct: 77 IEFFEEEDRF--YLVFEKMRGGSILSHIHKRRHFNELEASVV-VQDVASALDFLHNKGIA 133
Query: 243 HRDVKGSNLLIDK-NGV--LKIADFGLANYF------SPNKKRPLTSRVVTLWYRAPELL 293
HRD+K N+L + N V +KI DFGL + SP L + + Y APE++
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 294 LG----ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRT 326
A+ Y DLWS G +L + G P GR
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 114
Query: 190 EGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G+++ + +
Sbjct: 115 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 173
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA Y+S + K +++ W L
Sbjct: 174 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT--GAKLPVKWMALES--LQT 229
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 91
Query: 190 EGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G+++ + +
Sbjct: 92 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA Y+S + K +++ W L
Sbjct: 151 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT--GAKLPVKWMALES--LQT 206
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 75
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 193
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT+ T +Y
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYV 200
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D+WS G ++ + G P
Sbjct: 201 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 231
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKF----DTSEPHSVKFMAREIMILQKL-DHPNIV 187
+G G + V +A GK A+ KV T+ + + E+ I+ L H NIV
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 188 KLEGLATS------RMQYSLY-LVFEFMQTDLARIISNPEGKLTEPQQLL-------SGL 233
L G T +Y Y + F++ + +G+ E + LL G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 234 QHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL--TSRVVTLWYRAPE 291
+ +HRDV N+L+ V KI DFGLA + + +R+ W APE
Sbjct: 166 AFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW-MAPE 224
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
+ Y V D+WS G LL E+F LG PG + +++ K
Sbjct: 225 SIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 269
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 72
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 133 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 190
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 191 RIYTHQSDVWSYGVTVWELM 210
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 93
Query: 190 EGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G+++ + +
Sbjct: 94 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 152
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA Y+S + K +++ W L
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT--GAKLPVKWMALES--LQT 208
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 32/212 (15%)
Query: 132 KVGQGTYSNVYKA-----LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
++G+G + V+ A L +VA+K +K + SE F RE +L L H +I
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQ-REAELLTMLQHQHI 76
Query: 187 VKLEGLATSRMQYSLYLVFEFMQ-TDLARIISN--PEGKLTE------------------ 225
V+ G+ T L +VFE+M+ DL R + + P+ KL
Sbjct: 77 VRFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 226 PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA-NYFSPNKKRPLTSRVVT 284
Q+ +G+ + +HRD+ N L+ + V+KI DFG++ + +S + R ++
Sbjct: 135 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
+ + PE +L + D+WS G +L E+F
Sbjct: 195 IRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 225
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 69
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTS--RVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 187
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 188 RIYTHQSDVWSYGVTVWELM 207
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 115
Query: 190 EGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G+++ + +
Sbjct: 116 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 174
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA Y+S + K +++ W L
Sbjct: 175 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT--GAKLPVKWMALES--LQT 230
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 32/212 (15%)
Query: 132 KVGQGTYSNVYKA-----LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
++G+G + V+ A L +VA+K +K + SE F RE +L L H +I
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQ-REAELLTMLQHQHI 82
Query: 187 VKLEGLATSRMQYSLYLVFEFMQ-TDLARIISN--PEGKLTE------------------ 225
V+ G+ T L +VFE+M+ DL R + + P+ KL
Sbjct: 83 VRFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 226 PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA-NYFSPNKKRPLTSRVVT 284
Q+ +G+ + +HRD+ N L+ + V+KI DFG++ + +S + R ++
Sbjct: 141 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 285 LWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
+ + PE +L + D+WS G +L E+F
Sbjct: 201 IRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 231
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 153 VALKKVKFDT-SEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD 211
VA+K +K + SE ++ E ++ L H +V+L G+ T Q ++++ E+M
Sbjct: 51 VAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGVCTK--QRPIFIITEYMANG 104
Query: 212 LARIISNPEGKLTEPQQLLS-------GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADF 264
+ QQLL +++ + LHRD+ N L++ GV+K++DF
Sbjct: 105 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 164
Query: 265 GLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMP 323
GL+ Y ++ + + PE+L+ + + D+W+ G L+ E++ LG+ MP
Sbjct: 165 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYSLGK--MP 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 36/209 (17%)
Query: 126 SYDKIDKVGQGTYSN-VYKAL--DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
S+ D +G G VY+ + +RD VA+K++ P F RE+ +L++ D
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRD----VAVKRIL-----PECFSFADREVQLLRESD 75
Query: 183 -HPNIVKLEGLATSRMQYSLYLVFEFM---------QTDLARIISNPEGKLTEPQQLLSG 232
HPN+++ T + + Y+ E Q D A + P +T QQ SG
Sbjct: 76 EHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP---ITLLQQTTSG 130
Query: 233 LQHCHDRGILHRDVKGSNLLI---DKNGVLK--IADFGLANYFSPNKKRPLTSRVV--TL 285
L H H I+HRD+K N+LI + +G +K I+DFGL + + V T
Sbjct: 131 LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 286 WYRAPELLL--GATDYGVGIDLWSAGCLL 312
+ APE+L + +D++SAGC+
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVF 219
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 174 EIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS-- 231
E ++ L H +V+L G+ T Q ++++ E+M + QQLL
Sbjct: 53 EAKVMMNLSHEKLVQLYGVCTK--QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 110
Query: 232 -----GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW 286
+++ + LHRD+ N L++ GV+K++DFGL+ Y ++ +
Sbjct: 111 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 170
Query: 287 YRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMP 323
+ PE+L+ + + D+W+ G L+ E++ LG+ MP
Sbjct: 171 WSPPEVLM-YSKFSSKSDIWAFGVLMWEIYSLGK--MP 205
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 77
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q + L+ D R + G L Q+ G+ + D
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFG A +K +V W +L
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 195
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT T +Y
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTEPCYTPYYV 184
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D+WS G ++ + G P
Sbjct: 185 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 174 EIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS-- 231
E ++ L H +V+L G+ T Q ++++ E+M + QQLL
Sbjct: 49 EAKVMMNLSHEKLVQLYGVCTK--QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 106
Query: 232 -----GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW 286
+++ + LHRD+ N L++ GV+K++DFGL+ Y ++ +
Sbjct: 107 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 166
Query: 287 YRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMP 323
+ PE+L+ + + D+W+ G L+ E++ LG+ MP
Sbjct: 167 WSPPEVLM-YSKFSSKSDIWAFGVLMWEIYSLGK--MP 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 153 VALKKVKFDT-SEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD 211
VA+K +K + SE ++ E ++ L H +V+L G+ T Q ++++ E+M
Sbjct: 42 VAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGVCTK--QRPIFIITEYMANG 95
Query: 212 LARIISNPEGKLTEPQQLLS-------GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADF 264
+ QQLL +++ + LHRD+ N L++ GV+K++DF
Sbjct: 96 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 155
Query: 265 GLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMP 323
GL+ Y ++ + + PE+L+ + + D+W+ G L+ E++ LG+ MP
Sbjct: 156 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYSLGK--MP 212
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI + G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 82
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q + L+ D R + G L Q+ G+ + D
Sbjct: 83 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 200
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 201 RIYTHQSDVWSYGVTVWELM 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 153 VALKKVKFDT-SEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTD 211
VA+K +K + SE ++ E ++ L H +V+L G+ T Q ++++ E+M
Sbjct: 36 VAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGVCTK--QRPIFIITEYMANG 89
Query: 212 LARIISNPEGKLTEPQQLLS-------GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADF 264
+ QQLL +++ + LHRD+ N L++ GV+K++DF
Sbjct: 90 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 149
Query: 265 GLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMP 323
GL+ Y ++ + + PE+L+ + + D+W+ G L+ E++ LG+ MP
Sbjct: 150 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYSLGK--MP 206
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 77
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q + L+ D R + G L Q+ G+ + D
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFG A +K +V W +L
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 195
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 119 LVPKSAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMIL 178
+V + Y I K+G+G +S V G ALK++ E + RE +
Sbjct: 23 MVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRIL--CHEQQDREEAQREADMH 80
Query: 179 QKLDHPNIVKLEG--LATSRMQYSLYLVFEF-----MQTDLARIISNPEGKLTEPQQL-- 229
+ +HPNI++L L ++ +L+ F + ++ R+ + LTE Q L
Sbjct: 81 RLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERL-KDKGNFLTEDQILWL 139
Query: 230 ----LSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPN---KKRPLT--- 279
GL+ H +G HRD+K +N+L+ G + D G N + ++ LT
Sbjct: 140 LLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQD 199
Query: 280 --SRVVTLWYRAPELLLGATDYGVG--IDLWSAGCLLAEMFLG 318
++ T+ YRAPEL + + D+WS GC+L M G
Sbjct: 200 WAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 18/214 (8%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKV--KFDTSEPHSVKFMAREIMILQKLDHPNIVKLE 190
+G+G++ V A + A+K + K + M+ ++L+ + HP +V L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 191 GLATSRMQYSLYLVFE-------FMQTDLARIISNPEGKLTEPQQLLSGLQHCHDRGILH 243
+ + LY V + F R P + ++ S L + H I++
Sbjct: 106 --FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYA-AEIASALGYLHSLNIVY 162
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVV--TLWYRAPELLLGATDYGV 301
RD+K N+L+D G + + DFGL N + T+ T Y APE +L Y
Sbjct: 163 RDLKPENILLDSQGHIVLTDFGLC---KENIEHNSTTSTFCGTPEYLAPE-VLHKQPYDR 218
Query: 302 GIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHRIF 335
+D W G +L EM G P R E I
Sbjct: 219 TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 110/234 (47%), Gaps = 31/234 (13%)
Query: 107 LTDNIPREVLAGLVPKSAESYDKIDKVGQGTYSNVYKA-LDRDTGKIV--ALKKVKFDTS 163
++D + ++ L+P+ + ++ +G+G + +V +A L ++ G V A+K +K D
Sbjct: 7 ISDELKEKLEDVLIPEQQFTLGRM--LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII 64
Query: 164 EPHSVKFMAREIMILQKLDHPNIVKLEGLAT-SRMQYSL---YLVFEFMQ-TDL------ 212
++ RE +++ DHP++ KL G++ SR + L ++ FM+ DL
Sbjct: 65 ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA 124
Query: 213 ARIISNPEGKLTEPQQLL--------SGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADF 264
+RI NP P Q L G+++ R +HRD+ N ++ ++ + +ADF
Sbjct: 125 SRIGENP---FNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADF 181
Query: 265 GLAN--YFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
GL+ Y ++ S++ W L Y V D+W+ G + E+
Sbjct: 182 GLSRKIYSGDYYRQGCASKLPVKWLALES--LADNLYTVHSDVWAFGVTMWEIM 233
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 133 VGQGTYSNVYKAL--DRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY+ + + KI VA+K K D + + KFM+ E +I++ LDHP+IVKL
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS-EAVIMKNLDHPHIVKL 78
Query: 190 EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLSGLQHCHDRGIL------H 243
G+ + + ++ + +L + + L +L LQ C L H
Sbjct: 79 IGIIEEEPTWIIMELYPY--GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 136
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N+L+ +K+ DFGL+ Y + + + + +PE + +
Sbjct: 137 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE-SINFRRFTTAS 195
Query: 304 DLWSAGCLLAEMF 316
D+W + E+
Sbjct: 196 DVWMFAVCMWEIL 208
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 79
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q + L+ D R + G L Q+ G+ + D
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFG A +K +V W +L
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 197
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 198 RIYTHQSDVWSYGVTVWELM 217
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 133 VGQGTYSNVYKAL--DRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY+ + + KI VA+K K D + + KFM+ E +I++ LDHP+IVKL
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS-EAVIMKNLDHPHIVKL 74
Query: 190 EGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLSGLQHCHDRGIL------H 243
G+ + + ++ + +L + + L +L LQ C L H
Sbjct: 75 IGIIEEEPTWIIMELYPY--GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 132
Query: 244 RDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGI 303
RD+ N+L+ +K+ DFGL+ Y + + + + +PE + +
Sbjct: 133 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE-SINFRRFTTAS 191
Query: 304 DLWSAGCLLAEMF 316
D+W + E+
Sbjct: 192 DVWMFAVCMWEIL 204
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 174 EIMILQKLDHPNIVKLEGLATSRMQYSLYLVFEFMQTDLARIISNPEGKLTEPQQLLS-- 231
E ++ L H +V+L G+ T Q ++++ E+M + QQLL
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTK--QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 232 -----GLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW 286
+++ + LHRD+ N L++ GV+K++DFGL+ Y ++ +
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR 171
Query: 287 YRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMP 323
+ PE+L+ + + D+W+ G L+ E++ LG+ MP
Sbjct: 172 WSPPEVLM-YSKFSSKSDIWAFGVLMWEIYSLGK--MP 206
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKV-KFDTSEPHSVKFMAREIMILQKLDH 183
+ ++ + +G+G +S V + TG++ A+K + K+D + V E +L D
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 184 PNIVKLEGLATSRMQYSLYLVFEF-MQTDLARIISNPEGKLTEPQ------QLLSGLQHC 236
I +L A Y LYLV E+ + DL ++S ++ +++ +
Sbjct: 121 RWITQLH-FAFQDENY-LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 237 HDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
H G +HRD+K N+L+D+ G +++ADFG + V T Y +PE+L
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV 238
Query: 297 TDYGVG------IDLWSAGCLLAEMFLGR 319
D W+ G EMF G+
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 30/232 (12%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKF----DTSEPHSVKFMAREIMILQKL-DHPNIV 187
+G G + V +A GK A+ KV T+ + + E+ I+ L H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 188 KLEGLATS---RMQYSLYLVFEFMQTDLARI-----------ISNPEGKLTE------PQ 227
L G T + + Y + + L R NPE +L+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 228 QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL--TSRVVTL 285
Q+ G+ + +HRDV N+L+ V KI DFGLA + + +R+
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 233
Query: 286 WYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLHRIFK 336
W APE + Y V D+WS G LL E+F LG PG + +++ K
Sbjct: 234 W-MAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 283
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+ +++ TS P + K + E ++ +D
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATS-PKANKEILDEAYVMASVD 109
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 110 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 170 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 227
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 228 RIYTHQSDVWSYGVTVWELM 247
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI + G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 82
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 200
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 201 RIYTHQSDVWSYGVTVWELM 220
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 77
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFG A +K +V W +L
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 195
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI + G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 75
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFGLA +K +V W +L
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 193
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 82
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFG A +K +V W +L
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 200
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 201 RIYTHQSDVWSYGVTVWELM 220
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 127 YDKIDKVGQGTYSNVYKALDRDTG---KI-VALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+ KI +G G + VYK L G KI VA+K+++ TS P + K + E ++ +D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 75
Query: 183 HPNIVKLEGLA-TSRMQYSLYLVFEFMQTDLARIISNPEGK---LTEPQQLLSGLQHCHD 238
+P++ +L G+ TS +Q L+ D R + G L Q+ G+ + D
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 239 RGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR--PLTSRVVTLWYRAPELLLGA 296
R ++HRD+ N+L+ +KI DFG A +K +V W +L
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL--H 193
Query: 297 TDYGVGIDLWSAGCLLAEMF 316
Y D+WS G + E+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 232 GLQHCHDRGILHRDVKGSNLLIDK---NGVLKIADFGLANYFSPNKKRPLTSRVVTLWYR 288
+Q+ H I HRDVK NLL N +LK+ DFG A + + LT+ T +Y
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYV 230
Query: 289 APELLLGATDYGVGIDLWSAGCLLAEMFLGRP 320
APE +LG Y D WS G + + G P
Sbjct: 231 APE-VLGPEKYDKSCDXWSLGVIXYILLCGYP 261
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+++++ + +G+G + VYK D G +VA+K++K + + ++F E+ ++
Sbjct: 36 ASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERXQGGELQFQT-EVEMISMAV 93
Query: 183 HPNIVKLEGLA---TSRMQYSLYLVFEFMQTDL-ARIISNPEGKLTEPQQLL----SGLQ 234
H N+++L G T R+ Y+ + + L R S P + Q++ GL
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 235 HCHDRG---ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
+ HD I+HRDVK +N+L+D+ + DFGLA + T+ + APE
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPE 213
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGR 319
L D++ G +L E+ G+
Sbjct: 214 -YLSTGKSSEKTDVFGYGVMLLELITGQ 240
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 130 IDKVGQGTYSNVYKA-----LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
++++G+ + VYK + + VA+K +K P +F E M+ +L HP
Sbjct: 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF-RHEAMLRARLQHP 89
Query: 185 NIVKLEGLATSRMQYSLYLVF-------EFM----------QTDLARIISN---PEGKLT 224
N+V L G+ T S+ + EF+ TD R + + P +
Sbjct: 90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 225 EPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA-NYFSPNKKRPLTSRVV 283
Q+ +G+++ ++H+D+ N+L+ +KI+D GL ++ + + L + ++
Sbjct: 150 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
+ + APE ++ + + D+WS G +L E+F
Sbjct: 210 PIRWMAPEAIMYGK-FSIDSDIWSYGVVLWEVF 241
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 131 DKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREI-MILQKLDHPNIVKL 189
D +G+G ++ V ++ T + A+K ++ S F RE+ M+ Q H N+++L
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF--REVEMLYQCQGHRNVLEL 76
Query: 190 EGLATSRMQYSLYLVFEFMQ--TDLARI-----ISNPEGKLTEPQQLLSGLQHCHDRGIL 242
++ YLVFE M+ + L+ I + E + Q + S L H++GI
Sbjct: 77 IEFFEEEDRF--YLVFEKMRGGSILSHIHKRRHFNELEASVV-VQDVASALDFLHNKGIA 133
Query: 243 HRDVKGSNLLIDK-NGV--LKIADFGLANYF------SPNKKRPLTSRVVTLWYRAPELL 293
HRD+K N+L + N V +KI DF L + SP L + + Y APE++
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 294 LG----ATDYGVGIDLWSAGCLLAEMFLGRPIMPGRT 326
A+ Y DLWS G +L + G P GR
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 130 IDKVGQGTYSNVYKA-----LDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHP 184
++++G+ + VYK + + VA+K +K P +F E M+ +L HP
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF-RHEAMLRARLQHP 72
Query: 185 NIVKLEGLATSRMQYSLYLVF-------EFM----------QTDLARIISN---PEGKLT 224
N+V L G+ T S+ + EF+ TD R + + P +
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 225 EPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA-NYFSPNKKRPLTSRVV 283
Q+ +G+++ ++H+D+ N+L+ +KI+D GL ++ + + L + ++
Sbjct: 133 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
+ + APE ++ + + D+WS G +L E+F
Sbjct: 193 PIRWMAPEAIMYGK-FSIDSDIWSYGVVLWEVF 224
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 95
Query: 190 EGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G+++ + +
Sbjct: 96 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPL---TSRVVTLWYRAPELLLGATDY 299
HRD+ N ++D+ +K+ADFGLA + + T + + + A E L +
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE-SLQTQKF 213
Query: 300 GVGIDLWSAGCLLAEMFL-GRPIMP 323
D+WS G LL E+ G P P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 100/240 (41%), Gaps = 49/240 (20%)
Query: 130 IDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI--- 186
I K+G GT+ V D K A+K V+ S K A IL+K+ + +I
Sbjct: 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEAD---ILKKIQNDDINNN 96
Query: 187 --VKLEGLATSRMQYS-LYLVFEFMQTDLARIIS--NPEGKLTEPQQL-----LSGLQHC 236
VK G M Y + L+FE + L II+ N G E +L L L +
Sbjct: 97 NIVKYHG---KFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYL 153
Query: 237 HDRGILHRDVKGSNLLID-------------------------KNGVLKIADFGLANYFS 271
+ H D+K N+L+D K+ +K+ DFG A + S
Sbjct: 154 RKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS 213
Query: 272 PNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQL 331
+ +R YRAPE++L + V D+WS GC+LAE++ G + +E L
Sbjct: 214 DYHGSIINTR----QYRAPEVILNL-GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL 268
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 43/248 (17%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKL-- 181
E Y+ + +G+GT+ V + LD GK VALK ++ + + EI +L+K+
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---EINVLKKIKE 75
Query: 182 -DHPNIVKLEGLATSRMQYSLYLV----------FEFMQTDLARIISNPEGKLTEPQQLL 230
D N L L + + ++ FEF++ + + P + QL
Sbjct: 76 KDKENKF-LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHM-AYQLC 133
Query: 231 SGLQHCHDRGILHRDVKGSNLLID-------------------KNGVLKIADFGLANYFS 271
L+ H+ + H D+K N+L KN +++ADFG A +
Sbjct: 134 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH 193
Query: 272 PNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQL 331
+ T+ V T YR PE++L + D+WS GC+L E + G + E L
Sbjct: 194 EHH----TTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Query: 332 HRIFKLCG 339
+ K+ G
Sbjct: 249 VMMEKILG 256
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 43/248 (17%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKL-- 181
E Y+ + +G+GT+ V + LD GK VALK ++ + + EI +L+K+
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---EINVLKKIKE 84
Query: 182 -DHPNIVKLEGLATSRMQYSLYLV----------FEFMQTDLARIISNPEGKLTEPQQLL 230
D N L L + + ++ FEF++ + + P + QL
Sbjct: 85 KDKENKF-LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHM-AYQLC 142
Query: 231 SGLQHCHDRGILHRDVKGSNLLID-------------------KNGVLKIADFGLANYFS 271
L+ H+ + H D+K N+L KN +++ADFG A +
Sbjct: 143 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH 202
Query: 272 PNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQL 331
+ T+ V T YR PE++L + D+WS GC+L E + G + E L
Sbjct: 203 EHH----TTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Query: 332 HRIFKLCG 339
+ K+ G
Sbjct: 258 VMMEKILG 265
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 43/248 (17%)
Query: 125 ESYDKIDKVGQGTYSNVYKALDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKL-- 181
E Y+ + +G+GT+ V + LD GK VALK ++ + + EI +L+K+
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---EINVLKKIKE 107
Query: 182 -DHPNIVKLEGLATSRMQYSLYLV----------FEFMQTDLARIISNPEGKLTEPQQLL 230
D N L L + + ++ FEF++ + + P + QL
Sbjct: 108 KDKENKF-LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHM-AYQLC 165
Query: 231 SGLQHCHDRGILHRDVKGSNLLID-------------------KNGVLKIADFGLANYFS 271
L+ H+ + H D+K N+L KN +++ADFG A +
Sbjct: 166 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH 225
Query: 272 PNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQL 331
+ T+ V T YR PE++L + D+WS GC+L E + G + E L
Sbjct: 226 EHH----TTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Query: 332 HRIFKLCG 339
+ K+ G
Sbjct: 281 VMMEKILG 288
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGL 192
V QG Y K +D VA+K +K T + + + M RE I+ +LD+P IV+L G+
Sbjct: 26 VRQGVYRMRKKQID------VAIKVLKQGTEKADTEEMM-REAQIMHQLDNPYIVRLIGV 78
Query: 193 ATSRMQYSLYLVFE---------FMQTDLARI-ISNPEGKLTEPQQLLSGLQHCHDRGIL 242
+ +L LV E F+ I +SN L Q+ G+++ ++ +
Sbjct: 79 CQAE---ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL---HQVSMGMKYLEEKNFV 132
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW---YRAPELLLGATDY 299
HRD+ N+L+ KI+DFGL+ + T+R W + APE + +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAPE-CINFRKF 190
Query: 300 GVGIDLWSAGCLLAE 314
D+WS G + E
Sbjct: 191 SSRSDVWSYGVTMWE 205
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 88/216 (40%), Gaps = 35/216 (16%)
Query: 124 AESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDH 183
A+ + ++G+G Y V+ R G+ VA+K V F T E + F EI + H
Sbjct: 36 AKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVK-VFFTTEE--ASWFRETEIYQTVLMRH 90
Query: 184 PNIVKL--EGLATSRMQYSLYLVFEFMQTD-----LARIISNPEGKLTEPQQLLSGLQHC 236
NI+ + + LYL+ ++ + L + + L +SGL H
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHL 150
Query: 237 HDR--------GILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR---PLTSRVVTL 285
H I HRD+K N+L+ KNG IAD GLA F + P +RV T
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK 210
Query: 286 WYRAPELL------------LGATDYGVGIDLWSAG 309
Y PE+L + A Y G+ LW
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 140 NVYKALDRDTGKIVALK-KVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGLATSRMQ 198
+VY+A D +IVALK + +S+P RE +L P++V + Q
Sbjct: 49 DVYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQ 108
Query: 199 YSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGILHRDVKGSNL 251
LY+ + DLA + +G L P+ Q+ S L H G HRDVK N+
Sbjct: 109 --LYVDXRLINGVDLAAXLRR-QGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENI 165
Query: 252 LIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCL 311
L+ + + DFG+A+ + K L + V TL+Y APE + D+++ C+
Sbjct: 166 LVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPE-RFSESHATYRADIYALTCV 224
Query: 312 LAEMFLGRP 320
L E G P
Sbjct: 225 LYECLTGSP 233
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 96/244 (39%), Gaps = 47/244 (19%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKF----DTSEPHSVKFMAREIMILQKL-DHPNIV 187
+G G + V +A GK A+ KV T+ + + E+ I+ L H NIV
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 188 KLEGLATSR------MQYSLYL-VFEFMQTDLARIIS-------NPEGKLTE-------- 225
L G T +Y Y + F++ ++ +PEG E
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 226 -----PQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA-------NYFSPN 273
Q+ G+ + +HRDV N+L+ V KI DFGLA NY
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 218
Query: 274 KKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPGRTEVEQLH 332
R + + + APE + Y V D+WS G LL E+F LG PG + +
Sbjct: 219 NAR------LPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 271
Query: 333 RIFK 336
++ K
Sbjct: 272 KLVK 275
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 41/247 (16%)
Query: 125 ESYDKIDKVGQGTYSNVYKALD-RDTGKIVALKKVKFDTSEPHSVKFMAR-EIMILQKLD 182
E Y+ + +G+GT+ V + +D R G VALK +K K AR EI +L+K++
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIK----NVEKYKEAARLEINVLEKIN 88
Query: 183 H--PNIVKLEGLATSRMQYSLYLVFEFMQTDLARI-ISNPEGKLTEPQ--------QLLS 231
P+ L Y ++ F L+ L P QL
Sbjct: 89 EKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQ 148
Query: 232 GLQHCHDRGILHRDVKGSNLLID-------------------KNGVLKIADFGLANYFSP 272
++ HD + H D+K N+L K+ +++ DFG A +
Sbjct: 149 AVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHE 208
Query: 273 NKKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFLGRPIMPGRTEVEQLH 332
+ +++R YRAPE++L + D+WS GC++ E ++G + E L
Sbjct: 209 HHSTIVSTRH----YRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
Query: 333 RIFKLCG 339
+ ++ G
Sbjct: 264 MMERILG 270
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 155
Query: 190 EGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G++ + +
Sbjct: 156 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 214
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA + S + K +++ W L
Sbjct: 215 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT--GAKLPVKWMALES--LQT 270
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPYP 298
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 190 EGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G++ + +
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA + S + K +++ W L
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT--GAKLPVKWMALES--LQT 211
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 123 SAESYDKIDKVGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLD 182
+++++ + +G+G + VYK D G +VA+K++K + ++ ++F E+ ++
Sbjct: 28 ASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGELQFQT-EVEMISMAV 85
Query: 183 HPNIVKLEGLA---TSRMQYSLYLVFEFMQTDL-ARIISNPEGKLTEPQQLL----SGLQ 234
H N+++L G T R+ Y+ + + L R S P + Q++ GL
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 235 HCHDRG---ILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLWYRAPE 291
+ HD I+HRDVK +N+L+D+ + DFGLA + + + APE
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPE 205
Query: 292 LLLGATDYGVGIDLWSAGCLLAEMFLGR 319
L D++ G +L E+ G+
Sbjct: 206 -YLSTGKSSEKTDVFGYGVMLLELITGQ 232
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 190 EGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G++ + +
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA + S + K +++ W L
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT--GAKLPVKWMALES--LQT 211
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 174 EIMILQKLDHPNIVKLEGLAT--SRMQYSLYLVFEFMQ---------------TDLARII 216
E+ L + H NI++ G + + L+L+ F + +L I
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIA 127
Query: 217 SNPEGKLTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKR 276
L + + GL+ H I HRD+K N+L+ N IADFGLA F K
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA 187
Query: 277 PLT-SRVVTLWYRAPELLLGATDYG----VGIDLWSAGCLLAEM 315
T +V T Y APE+L GA ++ + ID+++ G +L E+
Sbjct: 188 GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 97
Query: 190 EGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G++ + +
Sbjct: 98 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA + S + K +++ W L
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT--GAKLPVKWMALES--LQT 212
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 101
Query: 190 EGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G++ + +
Sbjct: 102 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 160
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA + S + K +++ W L
Sbjct: 161 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT--GAKLPVKWMALES--LQT 216
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 97
Query: 190 EGLATSRMQYSLYLVFEFMQ-TDLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G++ + +
Sbjct: 98 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA + S + K +++ W L
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT--GAKLPVKWMALES--LQT 212
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 133 VGQGTYSNVYKA--LDRDTGKI-VALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKL 189
+G+G + VY LD D KI A+K + T +F+ I I++ HPN++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 94
Query: 190 EGLATSRMQYSLYLVFEFMQT-DLARIISNPEGKLTEPQ------QLLSGLQHCHDRGIL 242
G+ R + S +V +M+ DL I N T Q+ G++ + +
Sbjct: 95 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 153
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLA------NYFSPNKKRPLTSRVVTLWYRAPELLLGA 296
HRD+ N ++D+ +K+ADFGLA + S + K +++ W L
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT--GAKLPVKWMALES--LQT 209
Query: 297 TDYGVGIDLWSAGCLLAEMFL-GRPIMP 323
+ D+WS G LL E+ G P P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGL 192
+G+G + VY R G+ VA++ + + +K RE+M ++ H N+V G
Sbjct: 41 IGKGRFGQVYHG--RWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 193 ATSRMQYSLYLVFEFMQTDL-----ARIISNPEGKLTEPQQLLSGLQHCHDRGILHRDVK 247
S ++ +T A+I+ + Q+++ G+ + H +GILH+D+K
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLK 157
Query: 248 GSNLLIDKNGVLKIADFGL 266
N+ D NG + I DFGL
Sbjct: 158 SKNVFYD-NGKVVITDFGL 175
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 133 VGQGTYSNVYKALDRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIVKLEGL 192
V QG Y K +D VA+K +K T + + + M RE I+ +LD+P IV+L G+
Sbjct: 352 VRQGVYRMRKKQID------VAIKVLKQGTEKADTEEMM-REAQIMHQLDNPYIVRLIGV 404
Query: 193 ATSRMQYSLYLVFE---------FMQTDLARI-ISNPEGKLTEPQQLLSGLQHCHDRGIL 242
+ +L LV E F+ I +SN L Q+ G+++ ++ +
Sbjct: 405 CQAE---ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL---HQVSMGMKYLEEKNFV 458
Query: 243 HRDVKGSNLLIDKNGVLKIADFGLANYFSPNKKRPLTSRVVTLW---YRAPELLLGATDY 299
HR++ N+L+ KI+DFGL+ + T+R W + APE + +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAPE-CINFRKF 516
Query: 300 GVGIDLWSAGCLLAE 314
D+WS G + E
Sbjct: 517 SSRSDVWSYGVTMWE 531
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 38/194 (19%)
Query: 150 GKIVALKKVKFDTSEPHSVKFMAREIMIL-QKLDHPNIVKLEGLATSRMQYSLYLVFEFM 208
G+ VA+K++ D + + M EI +L + DHPN+++ T+ LY+ E
Sbjct: 57 GRPVAVKRMLIDFCD---IALM--EIKLLTESDDHPNVIRYYCSETT--DRFLYIALELC 109
Query: 209 QTDLARII-----SNPEGKLTEP-------QQLLSGLQHCHDRGILHRDVKGSNLLID-- 254
+L ++ S+ KL + +Q+ SG+ H H I+HRD+K N+L+
Sbjct: 110 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 169
Query: 255 -----------KNGVLKIADFGLANYFSPNK---KRPLTSRVVTLWYRAPELLLGATDYG 300
+N + I+DFGL + + L + T +RAPELL +T
Sbjct: 170 SRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRR 229
Query: 301 V--GIDLWSAGCLL 312
+ ID++S GC+
Sbjct: 230 LTRSIDIFSMGCVF 243
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 43/230 (18%)
Query: 133 VGQGTYSNVYKAL-----DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V KA R VA+K +K + + P ++ + E +L++++HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 188 KLEGLATSRMQYSLYLVFEFMQTDLAR-----------------------IISNPEGK-- 222
KL G + L L+ E+ + R + +P+ +
Sbjct: 90 KLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 223 -----LTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKK 275
++ Q+ G+Q+ + ++HRD+ N+L+ + +KI+DFGL+ Y +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 276 RPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPG 324
+ R+ W L Y D+WS G LL E+ LG PG
Sbjct: 208 KRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 38/194 (19%)
Query: 150 GKIVALKKVKFDTSEPHSVKFMAREIMIL-QKLDHPNIVKLEGLATSRMQYSLYLVFEFM 208
G+ VA+K++ D + + M EI +L + DHPN+++ T+ LY+ E
Sbjct: 57 GRPVAVKRMLIDFCD---IALM--EIKLLTESDDHPNVIRYYCSETT--DRFLYIALELC 109
Query: 209 QTDLARII-----SNPEGKLTEP-------QQLLSGLQHCHDRGILHRDVKGSNLLID-- 254
+L ++ S+ KL + +Q+ SG+ H H I+HRD+K N+L+
Sbjct: 110 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 169
Query: 255 -----------KNGVLKIADFGLANYFSPNK---KRPLTSRVVTLWYRAPELLLGATDYG 300
+N + I+DFGL + + L + T +RAPELL +T
Sbjct: 170 SRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRR 229
Query: 301 V--GIDLWSAGCLL 312
+ ID++S GC+
Sbjct: 230 LTRSIDIFSMGCVF 243
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 132 KVGQGTYSNVYKALDRDTG-----KIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNI 186
++G+G + V+ A + +VA+K +K T K RE +L L H +I
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR--KDFQREAELLTNLQHEHI 79
Query: 187 VKLEGLATSRMQYSLYLVFEFMQ-TDLARIIS---------------NPEGKLTEPQ--- 227
VK G+ L +VFE+M+ DL + + +G+L Q
Sbjct: 80 VKFYGVCGD--GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 228 ---QLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLA-NYFSPNKKRPLTSRVV 283
Q+ SG+ + + +HRD+ N L+ N ++KI DFG++ + +S + R ++
Sbjct: 138 IASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 284 TLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF 316
+ + PE ++ + D+WS G +L E+F
Sbjct: 198 PIRWMPPESIM-YRKFTTESDVWSFGVILWEIF 229
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 43/230 (18%)
Query: 133 VGQGTYSNVYKAL-----DRDTGKIVALKKVKFDTSEPHSVKFMAREIMILQKLDHPNIV 187
+G+G + V KA R VA+K +K + + P ++ + E +L++++HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 188 KLEGLATSRMQYSLYLVFEFMQTDLAR-----------------------IISNPEGK-- 222
KL G + L L+ E+ + R + +P+ +
Sbjct: 90 KLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 223 -----LTEPQQLLSGLQHCHDRGILHRDVKGSNLLIDKNGVLKIADFGLAN--YFSPNKK 275
++ Q+ G+Q+ + ++HRD+ N+L+ + +KI+DFGL+ Y +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 276 RPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMF-LGRPIMPG 324
+ R+ W L Y D+WS G LL E+ LG PG
Sbjct: 208 KRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,159,722
Number of Sequences: 62578
Number of extensions: 712067
Number of successful extensions: 4334
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 1392
Number of HSP's gapped (non-prelim): 1156
length of query: 584
length of database: 14,973,337
effective HSP length: 104
effective length of query: 480
effective length of database: 8,465,225
effective search space: 4063308000
effective search space used: 4063308000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)